Psyllid ID: psy775
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1460 | 2.2.26 [Sep-21-2011] | |||||||
| Q92410 | 478 | Alpha,alpha-trehalose-pho | N/A | N/A | 0.262 | 0.801 | 0.400 | 9e-81 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | N/A | 0.269 | 0.768 | 0.384 | 3e-80 | |
| Q07158 | 488 | Alpha,alpha-trehalose-pho | yes | N/A | 0.262 | 0.784 | 0.411 | 9e-78 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | N/A | 0.262 | 0.773 | 0.394 | 2e-77 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | N/A | 0.245 | 0.489 | 0.385 | 2e-76 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | N/A | 0.263 | 0.742 | 0.376 | 1e-75 | |
| O94213 | 475 | Alpha,alpha-trehalose-pho | N/A | N/A | 0.257 | 0.791 | 0.378 | 3e-75 | |
| Q00217 | 480 | Alpha,alpha-trehalose-pho | no | N/A | 0.259 | 0.789 | 0.390 | 4e-75 | |
| O59921 | 504 | Alpha,alpha-trehalose-pho | yes | N/A | 0.260 | 0.753 | 0.374 | 1e-73 | |
| Q96WK6 | 485 | Alpha,alpha-trehalose-pho | yes | N/A | 0.254 | 0.764 | 0.392 | 8e-73 |
| >sp|Q92410|TPS1_CANAL Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TPS1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 303 bits (775), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 162/404 (40%), Positives = 234/404 (57%), Gaps = 21/404 (5%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHW 181
IP + + KV+D LK+ + ++ + I D +YNG N WPLFH P F W
Sbjct: 57 IPEDEQTKVNDELKS-KFNCTAIFLSDTIADLHYNGFSNSILWPLFHYHPGEMNFDENAW 115
Query: 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFK 241
AY + N++FA L+I+ Q D ++W+HDYHLML +R + K
Sbjct: 116 AAYIEANKKFA------LEIVKQVNDDD----MIWVHDYHLMLLPEMLRQEIGNKKKNIK 165
Query: 242 LGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK 301
+GFFLH PFP +I+R+ P EIL+G+L CD++GFH DY +F+ R +
Sbjct: 166 IGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLP 225
Query: 302 NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQ--------KIVLGVDRLDYT 353
N +++ GR++ I PI I + F+ + V KQ K+++GVDRLDY
Sbjct: 226 NG-IKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYI 284
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ +L AFE L ++PE + KV L+Q+AVPSR DV+EYQ L+ + +LVGRING F T
Sbjct: 285 KGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGT 344
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+ PI Y++ I DEL S Y + V LV+ RDGMNLV+ E++ACQ + GVLI+S
Sbjct: 345 VEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQ-QDRKGVLILSE 403
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517
FAGA + ++ ALI NP+ + +E I +LT+PE++R L
Sbjct: 404 FAGAAQSLNGALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKL 447
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Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 301 bits (771), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 241/419 (57%), Gaps = 25/419 (5%)
Query: 127 EDKVSDLLKTLQEK--VMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
ED+ +++ LQ++ + V +D + D +YNG N WPLFH P F E+W AY
Sbjct: 74 EDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYHPGEINFDEENWEAY 133
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
N FA+ +K LQ L+W+ DYHLM+ +R + ++ K+GF
Sbjct: 134 RAANYAFAEAIVKNLQ----------DGDLIWVQDYHLMVLPQMLRELIGDKFKDIKIGF 183
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLH PFP +I+R+ P +EIL+G+L CD+VGFH DY +F+ C R L
Sbjct: 184 FLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILNLSTLPNG-- 241
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQLAQA---APRVIDTKQ-----KIVLGVDRLDYTKGL 356
VE+ G+ V + PI I E+F ++ R+ ++ K+++GVDRLDY KG+
Sbjct: 242 VEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDRLDYIKGV 301
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
+ AFE LE++PE + KV L+Q+AVPSR DV+EYQ+L+ +++LVGRINGRF T +
Sbjct: 302 PQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGRFGTVEY 361
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
+PI +++ + +EL + Y + V L+T RDGMNLV+ E++ C E G LI+S FAG
Sbjct: 362 TPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYI-CTQQERHGALILSEFAG 420
Query: 477 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCP--GQSSLG 533
A + ++ +++ NP+ + A IH ALTMPE +R N L + GQS +G
Sbjct: 421 AAQSLNGSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFWGQSFVG 479
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Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q07158|TPS1_KLULA Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 293 bits (749), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 168/408 (41%), Positives = 232/408 (56%), Gaps = 25/408 (6%)
Query: 122 IPTEFEDKVS-DLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
+P E + KV +LL+ + + + ++ D +YNG N WPLFH P F
Sbjct: 70 VPDEDKAKVKRELLEKFN--AIPIFLSDEVADLHYNGFSNSILWPLFHYHPGEITFDDTA 127
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLK- 239
W AY + N FAD+ E + +VW+HDYHLML IR + LK
Sbjct: 128 WLAYNEANMAFADEI----------EGNINDNDVVWVHDYHLMLLPEMIRQRVIAKKLKN 177
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
K+G+FLH PFP +I+R+ P EIL+G+L CD++GFH DY +F+ QR L
Sbjct: 178 IKIGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLIGFHTYDYARHFLSAVQRILNVNTL 237
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQ-LAQAA--PRVIDTKQ-----KIVLGVDRLD 351
VE GR V + PI I E F + L Q A R+ + K+ KI++GVDRLD
Sbjct: 238 PNG--VEFDGRFVNVGAFPIGIDVETFTEGLKQDAVIKRIKELKESFKGCKIIIGVDRLD 295
Query: 352 YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRF 411
Y KG+ +L A E L HPE + KV L+Q+AVPSR DV+EYQ L+ +++LVGRING+F
Sbjct: 296 YIKGVPQKLHALEVFLGAHPEWIGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQF 355
Query: 412 TTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471
T + PI +++ I EL S Y + V LV+ RDGMNLV+ E+++CQ E G LI+
Sbjct: 356 GTAEFVPIHFMHRSIPFQELISLYAVSDVCLVSSTRDGMNLVSYEYISCQ-EEKKGTLIL 414
Query: 472 SPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
S F GA + ++ ALI NP+ D AE I+ ALT+PE++R L K
Sbjct: 415 SEFTGAAQSLNGALIVNPWNTDDLAESINEALTVPEEKRAANWEKLYK 462
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Appears to play a role in controlling and restricting the influx of sugar into glycolysis, probably at the level of hexokinase. Necessary for trehalose-6-phosphate synthase and phosphatase activities. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/408 (39%), Positives = 235/408 (57%), Gaps = 25/408 (6%)
Query: 122 IPTEFEDKV-SDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
IP + +D+V DLL+ + + + +I D +YNG N WPLFH P F
Sbjct: 70 IPDDEKDQVRKDLLEKFN--AVPIFLSDEIADLHYNGFSNSILWPLFHYHPGEINFDENA 127
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIR-NIADEQNLK 239
W AY + NQ F ++ K + + L+W+HDYHLML +R I ++Q
Sbjct: 128 WLAYNEANQTFTNEIAKTM----------NHNDLIWVHDYHLMLVPEMLRVKIHEKQLQN 177
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
K+G+FLH PFP +I+R+ P EIL+G+L CD+VGFH DY +F+ QR L
Sbjct: 178 VKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTL 237
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERF---VQLAQAAPRVIDTKQ-----KIVLGVDRLD 351
VE+ GR V + PI I ++F ++ R+ K+ KI++GVDRLD
Sbjct: 238 PNG--VEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLD 295
Query: 352 YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRF 411
Y KG+ +L A E L +HPE KV L+Q+AVPSR DV+EYQ L+ +++LVGRING+F
Sbjct: 296 YIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQF 355
Query: 412 TTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471
T + PI +++ I +EL S Y + V LV+ RDGMNLV+ E++ACQ E G LI+
Sbjct: 356 GTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQ-EEKKGSLIL 414
Query: 472 SPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
S F GA + ++ A+I NP+ D ++ I+ ALT+P+ ++ + L K
Sbjct: 415 SEFTGAAQSLNGAIIVNPWNTDDLSDAINEALTLPDVKKEVNWEKLYK 462
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Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 229/384 (59%), Gaps = 25/384 (6%)
Query: 144 VHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILA 203
V + K+ + +YNG NG WPLFH +P + W +Y + N++F+ + L+
Sbjct: 88 VFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRIWNSYVEANEQFSSVVAEILK--- 144
Query: 204 QEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSD 263
P D LVW+HDYH+ML + I ++ ++GFFLHIPFP +IFR+ P
Sbjct: 145 ---PND----LVWVHDYHMML----LPEILKQKKPDARIGFFLHIPFPSSEIFRVLPCRK 193
Query: 264 EILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPY 323
EIL G+L C ++GFH DY +F+ C R +G + + R V++ P+ I
Sbjct: 194 EILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKD--RFVQVGVFPVGIDP 251
Query: 324 ERF---VQLAQAAPRVIDTKQ-----KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLE 375
++F ++ Q R+ + K+ K+++G+DRLDY KG+ +L+A E L +K+PE
Sbjct: 252 DKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKYPEWKG 311
Query: 376 KVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFY 435
K+ L+Q+AVPSR DV+EYQ LK+E+++LVGRING + + +SPI Y++ + EL + Y
Sbjct: 312 KLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSELTALY 371
Query: 436 RDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAA 495
+ AL+T +RDGMNLVA+E++ CQ E GVLI+S F GA + + A++ NP+ +
Sbjct: 372 NISDAALITSIRDGMNLVAQEYIVCQ-TENNGVLILSEFTGAAQSLSGAVMINPWNTEEV 430
Query: 496 AEVIHRALTMPEDERTLRMNYLRK 519
A+ IH +L MP +ER + L K
Sbjct: 431 ADSIHNSLLMPPEEREEKHQMLLK 454
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Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 229/406 (56%), Gaps = 22/406 (5%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHW 181
+P E V + LK + + V ID ++ D +YNG N WPLFH P F W
Sbjct: 66 VPEEEIPVVKERLKQ-EYNAVPVFIDDELADRHYNGFSNSILWPLFHYHPGEITFDESAW 124
Query: 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFK 241
AY + N+ FA K +Q L+W+HDYHLML +R + K
Sbjct: 125 EAYKEANRLFAKAVAKEVQ----------DGDLIWVHDYHLMLLPEMLREEIGDSKENVK 174
Query: 242 LGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK 301
+GFFLH PFP +I+R+ P +E+L G+L CD++GFH DY +F+ C R LG
Sbjct: 175 IGFFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPN 234
Query: 302 NLLVEHGGRTVRIRPLPIAIPYERF---VQLAQAAPRVIDTKQK-----IVLGVDRLDYT 353
+E G+ + PI I E+F ++ + R+ +QK +++GVDRLDY
Sbjct: 235 G--IEFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYI 292
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ +L A E L HPE + KV L+Q+AVPSR DV+EYQ+L+ +++LVGRING+F T
Sbjct: 293 KGVPQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGT 352
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+ PI +++ ++ DEL + Y + +V+ RDGMNLVA E++A Q + GVL++S
Sbjct: 353 VEFMPIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQ-KKRHGVLVLSE 411
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
FAGA + ++ ++I NP+ + A A+TM +++R L + L K
Sbjct: 412 FAGAAQSLNGSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDK 457
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O94213|TPS1_PICAN Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Pichia angusta GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 232/402 (57%), Gaps = 26/402 (6%)
Query: 144 VHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILA 203
+ + +I D +YNG N WPLFH P F W AY + N+ F +K ++
Sbjct: 82 IWLSDEIADLHYNGFSNSILWPLFHYHPGEMNFDEIAWAAYLEANKLFCQTILKEIK--- 138
Query: 204 QEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNL-KFKLGFFLHIPFPPWDIFRLFPWS 262
++W+HDYHLML + +R+ + + L K+GFFLH PFP +I+R+ P
Sbjct: 139 -------DGDVIWVHDYHLMLLPSLLRDQLNSKGLPNVKIGFFLHTPFPSSEIYRILPVR 191
Query: 263 DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIP 322
EIL+G+L CD++GFH DY +F+ +R L R + ++ + R V + PI I
Sbjct: 192 KEILEGVLSCDLIGFHTYDYVRHFLSSVERILKLRTSPQGVV--YNDRQVTVSAYPIGID 249
Query: 323 YERFVQLAQAAPRVIDTKQ---------KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 373
++F+ + KQ K+++GVDRLDY KG+ +L AFE LE+HPE
Sbjct: 250 VDKFLNGLKTDEVKSRIKQLETRFGKDCKLIIGVDRLDYIKGVPQKLHAFEIFLERHPEW 309
Query: 374 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELAS 433
+ KV L+Q+AVPSR DV+EYQ L+ +++LVGRINGRF T + PI +++ ++ EL S
Sbjct: 310 IGKVVLIQVAVPSRGDVEEYQSLRAAVNELVGRINGRFGTVEFVPIHFLHKSVNFQELIS 369
Query: 434 FYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 493
Y + V +V+ RDGMNLV+ E++ACQ + G L++S FAGA + ++ AL+ NP+ +
Sbjct: 370 VYAASDVCVVSSTRDGMNLVSYEYIACQ-QDRKGSLVLSEFAGAAQSLNGALVVNPWNTE 428
Query: 494 AAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQSSLGGN 535
+E I+ L M E++R R N+ +K K++ S G N
Sbjct: 429 ELSEAIYEGLIMSEEKR--RGNF-QKMFKYIEKYTASYWGEN 467
|
Pichia angusta (taxid: 870730) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00217|TPSB_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Aspergillus niger GN=tpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 284 bits (727), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 239/405 (59%), Gaps = 26/405 (6%)
Query: 127 EDKVSDLLKTLQEKVMS--VHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
ED++ + + LQE+ + V +D K+ D +YNG N WPL H P +F W AY
Sbjct: 67 EDEIDSVKQRLQEEFNATPVFMDDKLADRHYNGFSNSILWPLLHYHPGEIVFDEAAWDAY 126
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRN-IADEQNLKFKLG 243
+ N+ FA KTI A E A G LVW+HDYHLML +R +A ++G
Sbjct: 127 REANRLFA-KTI------AHE--AREGD-LVWVHDYHLMLLPEVLREELAALGKNNIRIG 176
Query: 244 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNL 303
FFLH PFP +I+R+ P ++L+G+L CD++GFH DY +F+ CC LG +
Sbjct: 177 FFLHTPFPSSEIYRILPVRSQLLRGVLQCDLIGFHTYDYARHFLSCCSHILGLVTTPSS- 235
Query: 304 LVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV------IDTK---QKIVLGVDRLDYTK 354
V+ R+V + PI I ++F + +P+V ++ K K+++ VDRLDY K
Sbjct: 236 -VKFKDRSVAVGAFPIGIDPDKFTE-GLKSPKVQNRIASLENKFQGTKLMVSVDRLDYIK 293
Query: 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 414
G+ +L A E L +HPE + KV L+Q+AVPSR DV+EYQ+L+ +++LVGRING+F T
Sbjct: 294 GIPQKLHALEVFLSQHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTV 353
Query: 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474
++ PI +++ +S DEL + Y + +V+ RDGMNLV+ E+VA Q + GVLI+S F
Sbjct: 354 DYMPIHFMHKSVSFDELIALYAASDACVVSSTRDGMNLVSFEYVATQ-QKRKGVLILSEF 412
Query: 475 AGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
AGA + ++ +++ NP+ + A H A++M +D R + L K
Sbjct: 413 AGAAQSLNGSIVVNPWNTEELASAYHEAVSMSDDLRAQKFEKLYK 457
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O59921|TPS1_EMENI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 231/403 (57%), Gaps = 23/403 (5%)
Query: 127 EDKVSDLLKTLQEK--VMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
E+++ L L+E+ + V ID ++ D +YNG N WPLFH P F W AY
Sbjct: 67 EEEIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYHPGEITFDESAWEAY 126
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+ N+ FA + +Q + D L+W+HDYHLML +R K+GF
Sbjct: 127 KEANRLFAQA------VASQVQDGD----LIWVHDYHLMLLPEMLREEIGNTKKNIKIGF 176
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLH PFP +I+R+ P +E+L G+L CD++GFH DY +F+ C R LG
Sbjct: 177 FLHTPFPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNG-- 234
Query: 305 VEHGGRTVRIRPLPIAIPYERF---VQLAQAAPRVIDTKQK-----IVLGVDRLDYTKGL 356
+E G+ + PI I E+F ++ + R+ +QK +++GVDRLDY KG+
Sbjct: 235 IEFQGKIIACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGV 294
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
+L A E L HPE + KV L+Q+AVPSR DV+EYQ+L+ +++LVGRING+F T +
Sbjct: 295 PQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEF 354
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
PI +++ ++ DEL + Y + +V+ RDGMNLV+ E++A Q + G L++S FAG
Sbjct: 355 MPIHFLHKSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQ-EKRHGSLVLSEFAG 413
Query: 477 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
A + ++ ++I NP+ + A H A+TM +++R L + L K
Sbjct: 414 AAQSLNGSIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDK 456
|
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q96WK6|TPS1_ZYGRO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Zygosaccharomyces rouxii GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (706), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 221/397 (55%), Gaps = 26/397 (6%)
Query: 132 DLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEF 191
DLL+ + + + +I D +YNG N WPLFH P F W AY + N F
Sbjct: 78 DLLEKFN--AIPIFLSDEIADLHYNGFSNSILWPLFHYHPGEINFDENAWLAYNEANATF 135
Query: 192 ADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLK-FKLGFFLHIPF 250
A + LQ LVW+HDYHLML + + LK KLG+FLH PF
Sbjct: 136 ASEICGNLQ----------DNDLVWVHDYHLMLLPEMLSAHIQRKGLKNIKLGWFLHTPF 185
Query: 251 PPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGR 310
P +I+R+ P EIL G+L CD++GFH DY +F+ QR L VE+ GR
Sbjct: 186 PSSEIYRILPVRQEILNGVLSCDLIGFHTYDYARHFLSSIQRCLNVNTLPNG--VEYQGR 243
Query: 311 TVRIRPLPIAIPYERFVQLAQA--APRVIDTKQ------KIVLGVDRLDYTKGLVHRLKA 362
V + PI I + F + Q + I T Q KI++GVDRLDY KG+ +L A
Sbjct: 244 FVNVGAFPIGIDVDTFKEGLQKENVKQRIRTLQERFKGCKIMVGVDRLDYIKGVPQKLHA 303
Query: 363 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYI 422
E L +HPE + KV L+Q+A+PSR DV+EYQ L+ +++LVGRING+F T + PI ++
Sbjct: 304 MEVFLNEHPEWIGKVVLVQLAIPSRGDVEEYQYLRSVVNELVGRINGQFGTIEFVPIHFM 363
Query: 423 YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH 482
+ I +EL S Y + +V+ RDGMNLV+ E++AC+ G LI+S F GA + ++
Sbjct: 364 HKSIPFEELISLYAVSDACIVSSTRDGMNLVSYEYIACR---KKGSLILSEFTGAAQSLN 420
Query: 483 EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
ALI NP+ D ++ I+ ALT+P++++ L K
Sbjct: 421 GALIVNPWNTDELSDSINEALTLPDEKKDSNWEKLYK 457
|
Zygosaccharomyces rouxii (taxid: 4956) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1460 | ||||||
| 156547621 | 798 | PREDICTED: alpha,alpha-trehalose-phospha | 0.275 | 0.503 | 0.808 | 0.0 | |
| 380011250 | 806 | PREDICTED: LOW QUALITY PROTEIN: alpha,al | 0.275 | 0.498 | 0.811 | 0.0 | |
| 383853810 | 790 | PREDICTED: alpha,alpha-trehalose-phospha | 0.284 | 0.526 | 0.779 | 0.0 | |
| 328776871 | 764 | PREDICTED: alpha,alpha-trehalose-phospha | 0.275 | 0.526 | 0.811 | 0.0 | |
| 328776873 | 771 | PREDICTED: alpha,alpha-trehalose-phospha | 0.275 | 0.521 | 0.811 | 0.0 | |
| 340715203 | 803 | PREDICTED: alpha,alpha-trehalose-phospha | 0.284 | 0.518 | 0.779 | 0.0 | |
| 350414398 | 803 | PREDICTED: alpha,alpha-trehalose-phospha | 0.284 | 0.518 | 0.779 | 0.0 | |
| 332023433 | 793 | Alpha,alpha-trehalose-phosphate synthase | 0.284 | 0.524 | 0.777 | 0.0 | |
| 307174674 | 860 | Alpha,alpha-trehalose-phosphate synthase | 0.284 | 0.483 | 0.774 | 0.0 | |
| 307206697 | 861 | Alpha,alpha-trehalose-phosphate synthase | 0.263 | 0.447 | 0.829 | 0.0 |
| >gi|156547621|ref|XP_001603693.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/403 (80%), Positives = 361/403 (89%), Gaps = 1/403 (0%)
Query: 121 PIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
PIP + + L KV++VH++P IFDSYYNGCCNGTFWPLFHSMPDRA F A+H
Sbjct: 71 PIPESDPNDRTPTAGLLSRKVVAVHVEPTIFDSYYNGCCNGTFWPLFHSMPDRATFIADH 130
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPAD-SGTPLVWIHDYHLMLAANTIRNIADEQNLK 239
W+AY+ VN+EFA KT+ AL+ + +E+ +GTPLVW+HDYHLMLAAN IR ADE+NLK
Sbjct: 131 WKAYSAVNEEFAAKTVGALEQIHKEQAGQGNGTPLVWVHDYHLMLAANWIRQAADEKNLK 190
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+DYCLNFVDCCQR LGCRVD
Sbjct: 191 LKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQDYCLNFVDCCQRSLGCRVD 250
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 359
RKNLLVEHGGRTVR+RPLPI IP++RFV LA+ AP+V+ T QKI+LGVDRLDYTKGLVHR
Sbjct: 251 RKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETAPKVMLTNQKIILGVDRLDYTKGLVHR 310
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
LKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EMDQL+G INGRFTTPNWSPI
Sbjct: 311 LKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEMDQLIGSINGRFTTPNWSPI 370
Query: 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 479
RYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVACQIN PPGVLIVSPFAGAGE
Sbjct: 371 RYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVACQINTPPGVLIVSPFAGAGE 430
Query: 480 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522
MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+REK
Sbjct: 431 MMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRREK 473
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|380011250|ref|XP_003689723.1| PREDICTED: LOW QUALITY PROTEIN: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/403 (81%), Positives = 361/403 (89%), Gaps = 1/403 (0%)
Query: 121 PIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
PIP + + L KV++VH++P IFDSYYNGCCNGTFWPLFHSMPDRA F AEH
Sbjct: 72 PIPESDPNDRTPTAGLLSRKVVAVHVEPSIFDSYYNGCCNGTFWPLFHSMPDRATFIAEH 131
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPAD-SGTPLVWIHDYHLMLAANTIRNIADEQNLK 239
WRAY+ VN+EFA KT++AL+ + +E+ +GTPLVW+HDYHLMLAAN IR ADE+ LK
Sbjct: 132 WRAYSAVNEEFAAKTVRALEEIHKEQKNQPNGTPLVWVHDYHLMLAANWIRQAADEKQLK 191
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+DYCLNFVDCCQR LGCRVD
Sbjct: 192 CKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQDYCLNFVDCCQRSLGCRVD 251
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 359
RKNLLVEHGGRTVR+RPLPI IP++RFV LA+ A +VI T QKIVLGVDRLDYTKGLV+R
Sbjct: 252 RKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETASKVISTNQKIVLGVDRLDYTKGLVNR 311
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
LKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EMDQL+GRINGRFTTPNWSPI
Sbjct: 312 LKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEMDQLIGRINGRFTTPNWSPI 371
Query: 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 479
RYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVACQIN PPGVLIVSPFAGAGE
Sbjct: 372 RYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVACQINTPPGVLIVSPFAGAGE 431
Query: 480 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522
MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+RE+
Sbjct: 432 MMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRRER 474
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|383853810|ref|XP_003702415.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/422 (77%), Positives = 368/422 (87%), Gaps = 6/422 (1%)
Query: 102 YAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNG 161
+ G G+ + +PD PIP + + L KV++VH++P +FDSYYNGCCNG
Sbjct: 45 WVGWPGMHMENPD-----EPIPESDPNDRTPTAGLLSRKVVAVHVEPTVFDSYYNGCCNG 99
Query: 162 TFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADS-GTPLVWIHDY 220
TFWPLFHSMPDRA F A+HWRAY+ VN++FA KT+ AL+ + +E+ S GTPLVWIHDY
Sbjct: 100 TFWPLFHSMPDRATFIADHWRAYSSVNEKFAAKTVGALEQIHKEQANQSNGTPLVWIHDY 159
Query: 221 HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE 280
HLMLAAN IR ADE+ LK KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+
Sbjct: 160 HLMLAANWIRQAADEKQLKLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQ 219
Query: 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 340
DYCLNFVDCCQR LGCRVDRKNLLVEHGGRTVR+RPLPI IP++RFV LA+ A +V+ T
Sbjct: 220 DYCLNFVDCCQRCLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETANKVMSTN 279
Query: 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 400
QKIVLGVDRLDYTKGLVHRLKAFE LLEKHP+H E+VT+LQIAVPSRTDV+EYQDLK EM
Sbjct: 280 QKIVLGVDRLDYTKGLVHRLKAFEMLLEKHPQHREQVTMLQIAVPSRTDVREYQDLKLEM 339
Query: 401 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460
DQL+GRINGRFTTPNWSPIRYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVAC
Sbjct: 340 DQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVAC 399
Query: 461 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
QIN PPGVLIVSPFAGAGE MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+R
Sbjct: 400 QINTPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRR 459
Query: 521 EK 522
E+
Sbjct: 460 ER 461
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|328776871|ref|XP_392397.3| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A isoform 2 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/403 (81%), Positives = 361/403 (89%), Gaps = 1/403 (0%)
Query: 121 PIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
PIP + + L KV++VH++P IFDSYYNGCCNGTFWPLFHSMPDRA F AEH
Sbjct: 37 PIPESDPNDRTPTAGLLSRKVVAVHVEPSIFDSYYNGCCNGTFWPLFHSMPDRATFIAEH 96
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPAD-SGTPLVWIHDYHLMLAANTIRNIADEQNLK 239
WRAY+ VN+EFA KT++AL+ + +E+ +GTPLVW+HDYHLMLAAN IR ADE+ LK
Sbjct: 97 WRAYSAVNEEFAAKTVRALEEIHKEQKNQPNGTPLVWVHDYHLMLAANWIRQAADEKQLK 156
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+DYCLNFVDCCQR LGCRVD
Sbjct: 157 CKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQDYCLNFVDCCQRSLGCRVD 216
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 359
RKNLLVEHGGRTVR+RPLPI IP++RFV LA+ A +VI T QKIVLGVDRLDYTKGLV+R
Sbjct: 217 RKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETANKVISTNQKIVLGVDRLDYTKGLVNR 276
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
LKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EMDQL+GRINGRFTTPNWSPI
Sbjct: 277 LKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEMDQLIGRINGRFTTPNWSPI 336
Query: 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 479
RYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVACQIN PPGVLIVSPFAGAGE
Sbjct: 337 RYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVACQINTPPGVLIVSPFAGAGE 396
Query: 480 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522
MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+RE+
Sbjct: 397 MMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRRER 439
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|328776873|ref|XP_003249233.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/403 (81%), Positives = 361/403 (89%), Gaps = 1/403 (0%)
Query: 121 PIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
PIP + + L KV++VH++P IFDSYYNGCCNGTFWPLFHSMPDRA F AEH
Sbjct: 37 PIPESDPNDRTPTAGLLSRKVVAVHVEPSIFDSYYNGCCNGTFWPLFHSMPDRATFIAEH 96
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPAD-SGTPLVWIHDYHLMLAANTIRNIADEQNLK 239
WRAY+ VN+EFA KT++AL+ + +E+ +GTPLVW+HDYHLMLAAN IR ADE+ LK
Sbjct: 97 WRAYSAVNEEFAAKTVRALEEIHKEQKNQPNGTPLVWVHDYHLMLAANWIRQAADEKQLK 156
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+DYCLNFVDCCQR LGCRVD
Sbjct: 157 CKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQDYCLNFVDCCQRSLGCRVD 216
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 359
RKNLLVEHGGRTVR+RPLPI IP++RFV LA+ A +VI T QKIVLGVDRLDYTKGLV+R
Sbjct: 217 RKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETANKVISTNQKIVLGVDRLDYTKGLVNR 276
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
LKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EMDQL+GRINGRFTTPNWSPI
Sbjct: 277 LKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEMDQLIGRINGRFTTPNWSPI 336
Query: 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 479
RYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVACQIN PPGVLIVSPFAGAGE
Sbjct: 337 RYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVACQINTPPGVLIVSPFAGAGE 396
Query: 480 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522
MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+RE+
Sbjct: 397 MMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRRER 439
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|340715203|ref|XP_003396108.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/422 (77%), Positives = 368/422 (87%), Gaps = 6/422 (1%)
Query: 102 YAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNG 161
+ G G+ + +P+ PIP + + L KVM+VH DP IFD+YYNGCCNG
Sbjct: 58 WVGWPGMHMENPN-----EPIPESDPNDRTPTAGLLSRKVMAVHFDPVIFDAYYNGCCNG 112
Query: 162 TFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKAL-QILAQEEPADSGTPLVWIHDY 220
TFWPLFHSMPDRA F AEHWRAY+ VN+EFA KT+ AL QI +++ +GTPLVW+HDY
Sbjct: 113 TFWPLFHSMPDRATFIAEHWRAYSAVNEEFAVKTVSALEQIYKEQKNQPNGTPLVWVHDY 172
Query: 221 HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE 280
HLMLAAN IR ADE+ L+ KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+
Sbjct: 173 HLMLAANWIRQRADEKRLRCKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQ 232
Query: 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 340
DYCLNFVDCCQR LGCRVDRKNLLVEHGGRTVR+RPLPI IP++RFV LA++A +V+ T
Sbjct: 233 DYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAESANKVMLTN 292
Query: 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 400
QKIVLGVDRLDYTKGLV+RLKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EM
Sbjct: 293 QKIVLGVDRLDYTKGLVNRLKAFELLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEM 352
Query: 401 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460
DQL+GRINGRFTTPNWSPIRYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVAC
Sbjct: 353 DQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVAC 412
Query: 461 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
QIN PPGVLIVSPFAGAGE MHEALICNPYE+D AAEVIHRALTMPEDERTLRMN+LR+R
Sbjct: 413 QINTPPGVLIVSPFAGAGEMMHEALICNPYELDEAAEVIHRALTMPEDERTLRMNHLRRR 472
Query: 521 EK 522
E+
Sbjct: 473 ER 474
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|350414398|ref|XP_003490305.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/422 (77%), Positives = 368/422 (87%), Gaps = 6/422 (1%)
Query: 102 YAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNG 161
+ G G+ + +P+ PIP + + L KVM+VH DP IFD+YYNGCCNG
Sbjct: 58 WVGWPGMHMENPN-----EPIPESDPNDRTPTAGLLSSKVMAVHFDPVIFDAYYNGCCNG 112
Query: 162 TFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKAL-QILAQEEPADSGTPLVWIHDY 220
TFWPLFHSMPDRA F AEHWRAY+ VN+EFA KT+ AL QI +++ +GTPLVW+HDY
Sbjct: 113 TFWPLFHSMPDRATFIAEHWRAYSAVNEEFAVKTVSALEQIYKEQKNQPNGTPLVWVHDY 172
Query: 221 HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE 280
HLMLAAN IR ADE+ L+ KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+
Sbjct: 173 HLMLAANWIRQRADEKRLRCKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQ 232
Query: 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 340
DYCLNFVDCCQR LGCRVDRKNLLVEHGGRTVR+RPLPI IP++RFV LA++A +V+ T
Sbjct: 233 DYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAESANKVMLTN 292
Query: 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 400
QKIVLGVDRLDYTKGLV+RLKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EM
Sbjct: 293 QKIVLGVDRLDYTKGLVNRLKAFELLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEM 352
Query: 401 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460
DQL+GRINGRFTTPNWSPIRYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVAC
Sbjct: 353 DQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVAC 412
Query: 461 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
QIN PPGVLIVSPFAGAGE MHEALICNPYE+D AAEVIHRALTMPEDERTLRMN+LR+R
Sbjct: 413 QINTPPGVLIVSPFAGAGEMMHEALICNPYELDEAAEVIHRALTMPEDERTLRMNHLRRR 472
Query: 521 EK 522
E+
Sbjct: 473 ER 474
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|332023433|gb|EGI63676.1| Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/422 (77%), Positives = 367/422 (86%), Gaps = 6/422 (1%)
Query: 102 YAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNG 161
+ G G+ + +P+ PIP + + L KV++VH+D IFDSYYNGCCNG
Sbjct: 45 WVGWPGMHMENPN-----EPIPESDPNDRTPTAGLLSRKVVAVHVDAGIFDSYYNGCCNG 99
Query: 162 TFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKAL-QILAQEEPADSGTPLVWIHDY 220
TFWPLFHSMPDRA F AEHWRAY+ VN++FA KT+ AL QI ++E +GTPLVW+HDY
Sbjct: 100 TFWPLFHSMPDRATFIAEHWRAYSAVNEQFAAKTVGALEQIHKEQENQQNGTPLVWVHDY 159
Query: 221 HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE 280
HLMLAAN IR A+E+NL+ KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+
Sbjct: 160 HLMLAANWIRQAAEEKNLRLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQ 219
Query: 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 340
DYCLNFVDCCQR LGCRVDRKNLLVEHGGRTVR+RPLPI IP++RFV LA+ A +V+ +
Sbjct: 220 DYCLNFVDCCQRCLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETATKVMQSN 279
Query: 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 400
QKIVLGVDRLDYTKGLVHRLKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EM
Sbjct: 280 QKIVLGVDRLDYTKGLVHRLKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEM 339
Query: 401 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460
DQL+G INGRFTTPNWSPIRYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVAC
Sbjct: 340 DQLIGCINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVAC 399
Query: 461 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
QIN PPGVLIVSPFAGAGE MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+R
Sbjct: 400 QINTPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRR 459
Query: 521 EK 522
E+
Sbjct: 460 ER 461
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|307174674|gb|EFN65057.1| Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/422 (77%), Positives = 366/422 (86%), Gaps = 6/422 (1%)
Query: 102 YAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNG 161
+ G G+ + +P+ PIP + + L KV++VH+D IFDSYYNGCCNG
Sbjct: 58 WVGWPGMHMENPN-----EPIPESDPNDRTPTAGLLSRKVVAVHVDAGIFDSYYNGCCNG 112
Query: 162 TFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKAL-QILAQEEPADSGTPLVWIHDY 220
TFWPLFHSMPDR F AEHWRAY+ VN+EFA KT+ AL QI ++E +GTPLVW+HDY
Sbjct: 113 TFWPLFHSMPDRTTFIAEHWRAYSTVNEEFAAKTVDALEQIHKEQENQSNGTPLVWVHDY 172
Query: 221 HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE 280
HLMLAAN IR ADE++L+ KLGFFLHIPFPPWDIFRLFPW+DEILQGMLGCDMVGFHI+
Sbjct: 173 HLMLAANWIRQAADEKDLRLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQ 232
Query: 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 340
DYCLNFVDCCQR LGCRVD KNLLVEHGGRTVR+RPLPI IP++RFV LA+ A +V+ +
Sbjct: 233 DYCLNFVDCCQRCLGCRVDHKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETANKVMQSN 292
Query: 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 400
QKIVLGVDRLDYTKGLVHRLKAFE LLEKHPEH E+VT+LQIAVPSRTDV+EYQDLK EM
Sbjct: 293 QKIVLGVDRLDYTKGLVHRLKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQDLKLEM 352
Query: 401 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460
DQL+G INGRFTTPNWSPIRYIYGC+SQDELA+FYRDAAVALVTPLRDGMNLVAKEFVAC
Sbjct: 353 DQLIGCINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVAC 412
Query: 461 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
QIN+PPGVLIVSPFAGAGE MHEALICNPYEID AAEVIHRALTMPEDERTLRMN+LR+R
Sbjct: 413 QINQPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRR 472
Query: 521 EK 522
E+
Sbjct: 473 ER 474
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|307206697|gb|EFN84652.1| Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/386 (82%), Positives = 357/386 (92%), Gaps = 1/386 (0%)
Query: 138 QEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIK 197
++ V++VH+DP IFDSYYNGCCNGTFWPLFHSMPDRA F AEHWRAY+ VN++FA+KT+
Sbjct: 144 EKTVVAVHVDPGIFDSYYNGCCNGTFWPLFHSMPDRATFTAEHWRAYSAVNEQFAEKTVG 203
Query: 198 ALQILAQEEPADS-GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIF 256
AL+ + +E+ S GTPLVW+HDYHLMLAAN IR ADE+NL+ KLGFFLHIPFPPWDIF
Sbjct: 204 ALEQIHKEQVNQSNGTPLVWVHDYHLMLAANWIRQAADEKNLRLKLGFFLHIPFPPWDIF 263
Query: 257 RLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRP 316
RLFPW+DEILQGMLGCDMVGFHI+DYCLNFVDCCQR LGCRVDRKNLLVEHGGRTVR+RP
Sbjct: 264 RLFPWADEILQGMLGCDMVGFHIQDYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRP 323
Query: 317 LPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376
LPI IP++RFV LA+ A +V+ + QKIVLGVDRLDYTKGLVHRLKAFE LLEKHP+H E+
Sbjct: 324 LPIGIPFDRFVSLAETANKVMQSNQKIVLGVDRLDYTKGLVHRLKAFEMLLEKHPQHREQ 383
Query: 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 436
VT+LQIAVPSRTDV+EYQDLK EMDQL+G INGRFTTPNWSPIRYIYGC+SQDELA+FYR
Sbjct: 384 VTMLQIAVPSRTDVREYQDLKLEMDQLIGCINGRFTTPNWSPIRYIYGCVSQDELAAFYR 443
Query: 437 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 496
DAAVALVTPLRDGMNLVAKEFVACQIN+PPGVLIVSPFAGAGE MHEALICNPYEID AA
Sbjct: 444 DAAVALVTPLRDGMNLVAKEFVACQINKPPGVLIVSPFAGAGEMMHEALICNPYEIDEAA 503
Query: 497 EVIHRALTMPEDERTLRMNYLRKREK 522
EVIHRALTMPEDERTLRMN+LR+RE+
Sbjct: 504 EVIHRALTMPEDERTLRMNHLRRRER 529
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1460 | ||||||
| FB|FBgn0027560 | 809 | Tps1 "Trehalose-6-phosphate sy | 0.262 | 0.473 | 0.766 | 3.6e-198 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.263 | 0.525 | 0.384 | 8e-77 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.269 | 0.768 | 0.391 | 3.5e-74 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.262 | 0.801 | 0.400 | 1.2e-73 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.262 | 0.801 | 0.400 | 1.2e-73 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.262 | 0.773 | 0.394 | 7.1e-72 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.249 | 0.688 | 0.4 | 2.8e-71 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.262 | 0.759 | 0.371 | 2.6e-70 | |
| ASPGD|ASPL0000073095 | 474 | AN8639 [Emericella nidulans (t | 0.252 | 0.776 | 0.384 | 2.8e-68 | |
| UNIPROTKB|Q3AEA9 | 477 | otsA "Alpha, alpha-trehalose-p | 0.256 | 0.784 | 0.375 | 1.4e-66 |
| FB|FBgn0027560 Tps1 "Trehalose-6-phosphate synthase 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1602 (569.0 bits), Expect = 3.6e-198, Sum P(2) = 3.6e-198
Identities = 295/385 (76%), Positives = 334/385 (86%)
Query: 139 EKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKA 198
E+V+SV+ID KIFDSYYNGCCN FWPLFHSMP RA F EHW Y VN+ FA +TI+A
Sbjct: 96 EQVVSVNIDSKIFDSYYNGCCNKIFWPLFHSMPGRANFGGEHWHDYVTVNKHFAVRTIEA 155
Query: 199 LQ-ILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 257
L+ LA+ + ++ P+VWIHDYHLMLAAN +R A+E+NL +L FFLHIPFPPWDIFR
Sbjct: 156 LEKCLAKNQGSEKSPPIVWIHDYHLMLAANWVREHAEEKNLPCRLAFFLHIPFPPWDIFR 215
Query: 258 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPL 317
L PWSDEILQGMLGCD+VGFHI+DYCLNFVDCCQR LGCRVDR NLLVEHGGRTVR+RPL
Sbjct: 216 LLPWSDEILQGMLGCDLVGFHIQDYCLNFVDCCQRNLGCRVDRNNLLVEHGGRTVRVRPL 275
Query: 318 PIAIPYERFVQLAQAAPRVIDT-KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376
PI IPYERFV LA AP+V+ T K +I+LGVDRLDYTKGLVHRL AFE LL K+P+H EK
Sbjct: 276 PIGIPYERFVNLATTAPKVLKTSKMQIILGVDRLDYTKGLVHRLMAFEALLLKYPQHKEK 335
Query: 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 436
V+LLQI+VPSRTDVKEY++LKEE+DQLVGRINGRFTT NW+PIRYIY +SQDELA+ YR
Sbjct: 336 VSLLQISVPSRTDVKEYRELKEEVDQLVGRINGRFTTANWAPIRYIYDYVSQDELAALYR 395
Query: 437 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 496
DAAV LVTPLRDGMNLVAKEFVACQINE PGVL++SPFAGAGE MHEAL+CNPYE++ AA
Sbjct: 396 DAAVCLVTPLRDGMNLVAKEFVACQINEVPGVLVISPFAGAGEMMHEALLCNPYEVNEAA 455
Query: 497 EVIHRALTMPEDERTLRMNYLRKRE 521
EVIHRALTMPEDER LRM LR+RE
Sbjct: 456 EVIHRALTMPEDERVLRMARLRRRE 480
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 728 (261.3 bits), Expect = 8.0e-77, Sum P(2) = 8.0e-77
Identities = 159/414 (38%), Positives = 244/414 (58%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMS---VHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCA 178
I E E+ +K L K S V + K+ + +YNG NG WPLFH +P +
Sbjct: 63 IGAEIEEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDD 122
Query: 179 EHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNL 238
W +Y + N++F+ ++ A +IL +P D LVW+HDYH+ML + I ++
Sbjct: 123 RIWNSYVEANEQFS--SVVA-EIL---KPND----LVWVHDYHMML----LPEILKQKKP 168
Query: 239 KFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRV 298
++GFFLHIPFP +IFR+ P EIL G+L C ++GFH DY +F+ C R +G
Sbjct: 169 DARIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLET 228
Query: 299 DRKNLLVEHGGRTVRIRPLPIAIPYERF---VQLAQAAPRVIDTKQ-----KIVLGVDRL 350
+ + R V++ P+ I ++F ++ Q R+ + K+ K+++G+DRL
Sbjct: 229 APNGVYFKD--RFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRL 286
Query: 351 DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGR 410
DY KG+ +L+A E L +K+PE K+ L+Q+AVPSR DV+EYQ LK+E+++LVGRING
Sbjct: 287 DYIKGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGL 346
Query: 411 FTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLI 470
+ + +SPI Y++ + EL + Y + AL+T +RDGMNLVA+E++ CQ E GVLI
Sbjct: 347 YGSIGYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ-TENNGVLI 405
Query: 471 VSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR-EKH 523
+S F GA + + A++ NP+ + A+ IH +L MP +ER + L K KH
Sbjct: 406 LSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKH 459
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 759 (272.2 bits), Expect = 3.5e-74, P = 3.5e-74
Identities = 164/419 (39%), Positives = 245/419 (58%)
Query: 127 EDKVSDLLKTLQEK--VMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
ED+ +++ LQ++ + V +D + D +YNG N WPLFH P F E+W AY
Sbjct: 74 EDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYHPGEINFDEENWEAY 133
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
N FA+ +K LQ D L+W+ DYHLM+ +R + ++ K+GF
Sbjct: 134 RAANYAFAEAIVKNLQ------DGD----LIWVQDYHLMVLPQMLRELIGDKFKDIKIGF 183
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLH PFP +I+R+ P +EIL+G+L CD+VGFH DY +F+ C R L
Sbjct: 184 FLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILNLSTLPNG-- 241
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQLAQA---APRVIDTKQ-----KIVLGVDRLDYTKGL 356
VE+ G+ V + PI I E+F ++ R+ ++ K+++GVDRLDY KG+
Sbjct: 242 VEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDRLDYIKGV 301
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
+ AFE LE++PE + KV L+Q+AVPSR DV+EYQ+L+ +++LVGRINGRF T +
Sbjct: 302 PQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGRFGTVEY 361
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
+PI +++ + +EL + Y + V L+T RDGMNLV+ E++ C E G LI+S FAG
Sbjct: 362 TPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYI-CTQQERHGALILSEFAG 420
Query: 477 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL-RKREKHMN-CPGQSSLG 533
A + ++ +++ NP+ + A IH ALTMPE +R N L R K+ + GQS +G
Sbjct: 421 AAQSLNGSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFWGQSFVG 479
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 1.2e-73, P = 1.2e-73
Identities = 162/404 (40%), Positives = 235/404 (58%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHW 181
IP + + KV+D LK+ + ++ + I D +YNG N WPLFH P F W
Sbjct: 57 IPEDEQTKVNDELKS-KFNCTAIFLSDTIADLHYNGFSNSILWPLFHYHPGEMNFDENAW 115
Query: 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFK 241
AY + N++FA L+I+ Q D ++W+HDYHLML +R + K
Sbjct: 116 AAYIEANKKFA------LEIVKQVNDDD----MIWVHDYHLMLLPEMLRQEIGNKKKNIK 165
Query: 242 LGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK 301
+GFFLH PFP +I+R+ P EIL+G+L CD++GFH DY +F+ R + V
Sbjct: 166 IGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVP-NVSTL 224
Query: 302 NLLVEHGGRTVRIRPLPIAIPYERFVQ-LAQ--AAPRVIDTKQK-----IVLGVDRLDYT 353
+++ GR++ I PI I + F+ L + R+ K K +++GVDRLDY
Sbjct: 225 PNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYI 284
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ +L AFE L ++PE + KV L+Q+AVPSR DV+EYQ L+ + +LVGRING F T
Sbjct: 285 KGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGT 344
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+ PI Y++ I DEL S Y + V LV+ RDGMNLV+ E++ACQ + GVLI+S
Sbjct: 345 VEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQ-QDRKGVLILSE 403
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517
FAGA + ++ ALI NP+ + +E I +LT+PE++R L
Sbjct: 404 FAGAAQSLNGALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKL 447
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 1.2e-73, P = 1.2e-73
Identities = 162/404 (40%), Positives = 235/404 (58%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHW 181
IP + + KV+D LK+ + ++ + I D +YNG N WPLFH P F W
Sbjct: 57 IPEDEQTKVNDELKS-KFNCTAIFLSDTIADLHYNGFSNSILWPLFHYHPGEMNFDENAW 115
Query: 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFK 241
AY + N++FA L+I+ Q D ++W+HDYHLML +R + K
Sbjct: 116 AAYIEANKKFA------LEIVKQVNDDD----MIWVHDYHLMLLPEMLRQEIGNKKKNIK 165
Query: 242 LGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK 301
+GFFLH PFP +I+R+ P EIL+G+L CD++GFH DY +F+ R + V
Sbjct: 166 IGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVP-NVSTL 224
Query: 302 NLLVEHGGRTVRIRPLPIAIPYERFVQ-LAQ--AAPRVIDTKQK-----IVLGVDRLDYT 353
+++ GR++ I PI I + F+ L + R+ K K +++GVDRLDY
Sbjct: 225 PNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYI 284
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ +L AFE L ++PE + KV L+Q+AVPSR DV+EYQ L+ + +LVGRING F T
Sbjct: 285 KGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGT 344
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+ PI Y++ I DEL S Y + V LV+ RDGMNLV+ E++ACQ + GVLI+S
Sbjct: 345 VEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQ-QDRKGVLILSE 403
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517
FAGA + ++ ALI NP+ + +E I +LT+PE++R L
Sbjct: 404 FAGAAQSLNGALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKL 447
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 729 (261.7 bits), Expect = 7.1e-72, Sum P(2) = 7.1e-72
Identities = 161/408 (39%), Positives = 235/408 (57%)
Query: 122 IPTEFEDKV-SDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEH 180
IP + +D+V DLL+ + + + +I D +YNG N WPLFH P F
Sbjct: 70 IPDDEKDQVRKDLLEKFN--AVPIFLSDEIADLHYNGFSNSILWPLFHYHPGEINFDENA 127
Query: 181 WRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIR-NIADEQNLK 239
W AY + NQ F ++ K + + L+W+HDYHLML +R I ++Q
Sbjct: 128 WLAYNEANQTFTNEIAKTM----------NHNDLIWVHDYHLMLVPEMLRVKIHEKQLQN 177
Query: 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVD 299
K+G+FLH PFP +I+R+ P EIL+G+L CD+VGFH DY +F+ QR L
Sbjct: 178 VKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTL 237
Query: 300 RKNLLVEHGGRTVRIRPLPIAIPYERF---VQLAQAAPRVIDTKQ-----KIVLGVDRLD 351
VE+ GR V + PI I ++F ++ R+ K+ KI++GVDRLD
Sbjct: 238 PNG--VEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLD 295
Query: 352 YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRF 411
Y KG+ +L A E L +HPE KV L+Q+AVPSR DV+EYQ L+ +++LVGRING+F
Sbjct: 296 YIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQF 355
Query: 412 TTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471
T + PI +++ I +EL S Y + V LV+ RDGMNLV+ E++ACQ E G LI+
Sbjct: 356 GTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQ-EEKKGSLIL 414
Query: 472 SPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
S F GA + ++ A+I NP+ D ++ I+ ALT+P+ ++ + L K
Sbjct: 415 SEFTGAAQSLNGAIIVNPWNTDDLSDAINEALTLPDVKKEVNWEKLYK 462
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 732 (262.7 bits), Expect = 2.8e-71, P = 2.8e-71
Identities = 156/390 (40%), Positives = 230/390 (58%)
Query: 144 VHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILA 203
V +D ++ D +YNG N WPLFH P F W AY +VN+ FA +K +Q
Sbjct: 88 VFVDDELADRHYNGFANSILWPLFHYHPGEITFDESAWSAYKEVNRLFAQTVVKDVQ--- 144
Query: 204 QEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSD 263
D ++W+HDYHLML +R + K+GFFLH PFP +I+R+ P
Sbjct: 145 ---DGD----MIWVHDYHLMLLPEMLREEIGDSKKNVKIGFFLHTPFPSSEIYRILPVRQ 197
Query: 264 EILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPY 323
+LQG+L CD++GFH DY +F+ C R L V+ GR V + PI I
Sbjct: 198 ALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNG--VQFAGRFVTVGAFPIGIDP 255
Query: 324 ERFVQLAQAAPRVID-----TKQ----KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL 374
E+FV+ Q P+V T++ K+++GVDRLDY KG+ +L A E L +HPE +
Sbjct: 256 EKFVEGLQK-PKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVFLTEHPEWI 314
Query: 375 EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 434
K+ L+Q+AVPSR DV+EYQ+L+ +++LVGRING+F T + PI +++ +S DELA+
Sbjct: 315 GKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSVSFDELAAL 374
Query: 435 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 494
Y + V LV+ RDGMNLV+ E++A Q + GV+I+S F GA + + +LI NP+ +
Sbjct: 375 YAVSDVCLVSSTRDGMNLVSYEYIATQ-RDRHGVMILSEFTGAAQSLSGSLIVNPWNTEE 433
Query: 495 AAEVIHRALTMPEDERTLRMNYLRKREKHM 524
A IH A+TM ++R N+ +K E+++
Sbjct: 434 LANAIHDAVTMGPEQR--EANF-KKLERYV 460
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 723 (259.6 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 152/409 (37%), Positives = 235/409 (57%)
Query: 127 EDKVSDLLKTLQEK--VMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
E+++ L L+E+ + V ID ++ D +YNG N WPLFH P F W AY
Sbjct: 67 EEEIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYHPGEITFDESAWEAY 126
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+ N+ FA + +Q + D L+W+HDYHLML +R K+GF
Sbjct: 127 KEANRLFAQA------VASQVQDGD----LIWVHDYHLMLLPEMLREEIGNTKKNIKIGF 176
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLH PFP +I+R+ P +E+L G+L CD++GFH DY +F+ C R LG
Sbjct: 177 FLHTPFPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNG-- 234
Query: 305 VEHGGRTVRIRPLPIAIPYERF---VQLAQAAPRVIDTKQK-----IVLGVDRLDYTKGL 356
+E G+ + PI I E+F ++ + R+ +QK +++GVDRLDY KG+
Sbjct: 235 IEFQGKIIACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGV 294
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
+L A E L HPE + KV L+Q+AVPSR DV+EYQ+L+ +++LVGRING+F T +
Sbjct: 295 PQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEF 354
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
PI +++ ++ DEL + Y + +V+ RDGMNLV+ E++A Q + G L++S FAG
Sbjct: 355 MPIHFLHKSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQ-EKRHGSLVLSEFAG 413
Query: 477 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525
A + ++ ++I NP+ + A H A+TM +++R L + K +K++N
Sbjct: 414 AAQSLNGSIIVNPWNTEELAAAYHEAVTMSDEQRALNFS---KLDKYVN 459
|
|
| ASPGD|ASPL0000073095 AN8639 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 704 (252.9 bits), Expect = 2.8e-68, P = 2.8e-68
Identities = 151/393 (38%), Positives = 226/393 (57%)
Query: 138 QEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIK 197
+ + + +D + S+YN NG WP+ H F + W++Y +VN+ FAD
Sbjct: 73 ENNAVGIFLDEALAHSHYNVFSNGIAWPILHYQSG-VDFNEDAWKSYKKVNEIFADSVA- 130
Query: 198 ALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 257
E A G L+WIHDYHL+L +R+ ++Q K +GF LH PFP D +R
Sbjct: 131 --------ESASDGD-LIWIHDYHLLLLPAYLRDRLEKQGKKCPIGFTLHTPFPAEDFWR 181
Query: 258 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPL 317
P E+L G+L CD++GFH ++Y NF++CC R G V K+ + + G T R
Sbjct: 182 ALPVQKELLAGVLACDLIGFHTDEYKRNFIECCSR--GLDVSVKDDSIVYQGHTARTGTF 239
Query: 318 PIAIPYERF---VQLAQAAPRVIDT----KQK-IVLGVDRLDYTKGLVHRLKAFETLLEK 369
+ + +F +Q + R+ + K K ++LGVDRLDYTKGLV +L+ ++ L +
Sbjct: 240 VVGVDPAKFTDGLQTTEVKNRIKELEDEYKHKTVILGVDRLDYTKGLVQKLQGYDYFLRQ 299
Query: 370 HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQD 429
HPE KV L+Q+A+PSR DVKEYQ+L+ E+ LVG+ING +TP+ +PI Y++ +
Sbjct: 300 HPELKNKVRLIQVAIPSREDVKEYQELERELSMLVGKINGEHSTPDGTPIIYLHHSVPFT 359
Query: 430 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALIC-N 488
+L + YR A + L+T RDGMNLVA E+VACQ + GVL++S AGA M + I N
Sbjct: 360 DLTALYRIADICLITSRRDGMNLVAAEYVACQ-KDRFGVLVLSELAGAASFMSKGSITFN 418
Query: 489 PYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521
P A+ +++A TM +E+ + YL+ E
Sbjct: 419 PSSAQQLADAVYKAATMSPEEK--KQGYLQLEE 449
|
|
| UNIPROTKB|Q3AEA9 otsA "Alpha, alpha-trehalose-phosphate synthase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 688 (247.2 bits), Expect = 1.4e-66, P = 1.4e-66
Identities = 150/400 (37%), Positives = 235/400 (58%)
Query: 128 DKVSDLLKTLQEKVMSVHI--DPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYA 185
+K +++ ++++ V I + + YY G NG WPL H MP++ E++R Y
Sbjct: 56 EKPAEVQAVIKDEFQFVEILLSREEVEGYYEGYANGVLWPLCHLMPEKVRMYEENYRIYR 115
Query: 186 QVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFF 245
+VNQ+FA K L+ +GT L+WIHDYHL L + IR ++N ++ FF
Sbjct: 116 EVNQKFAQKAATLLR---------TGT-LLWIHDYHLALMPHFIR----QKNPWQRIAFF 161
Query: 246 LHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLV 305
HIPFPP ++F + PW++EIL+G+LG D++GFHI+DY NF+ +R L V+ + V
Sbjct: 162 WHIPFPPVELFTIQPWAEEILRGLLGADIIGFHIDDYRENFLRAVERVLKLPVNYEWGTV 221
Query: 306 EHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQ-----KIVLGVDRLDYTKGLVHRL 360
+ GR V ++ +PI I + F + P + + +Q KI LGV+RLDYTKGL ++
Sbjct: 222 YYNGREVLVKAVPIGIETKNF---QKEVPEITEIEQEIAGLKIFLGVERLDYTKGLKEKI 278
Query: 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420
+ F LEK+PE+ KV LLQ+AVP+R ++ +YQ E+ ++N RF +W PI+
Sbjct: 279 QGFARFLEKNPEYRGKVKLLQVAVPTRENIDQYQTYAREVLAEAAKVNERFGDNHWQPIK 338
Query: 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 480
+ SQ+EL YR A ++T L DG+NLVAKE++A + + PGVLI+S G Q
Sbjct: 339 ILKRNYSQEELIYLYRIADALVITSLEDGLNLVAKEYIASR--KEPGVLILSKRTGVARQ 396
Query: 481 MHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
++ AL+ NPY + A + A+ MP+ + + L+++
Sbjct: 397 LNAALLVNPYSPEEIALKMKEAIEMPDTLKKKSFSLLKEQ 436
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1460 | |||
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 1e-177 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-151 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 1e-148 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 1e-148 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-139 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 1e-137 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-123 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 1e-123 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 1e-116 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-112 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 6e-94 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 2e-88 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 9e-85 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 2e-80 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-75 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-71 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 4e-66 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 7e-65 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 4e-64 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 3e-55 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 2e-46 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 2e-36 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 4e-36 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 3e-35 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 5e-34 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 2e-22 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 3e-21 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 6e-20 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-19 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 3e-19 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 7e-19 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 2e-18 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 1e-15 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 4e-15 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 2e-14 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 9e-14 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 2e-13 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 2e-13 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 6e-13 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 1e-12 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 3e-12 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 3e-11 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 1e-09 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 7e-09 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 8e-09 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 1e-08 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 2e-08 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 3e-08 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 1e-07 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 5e-07 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 6e-07 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 1e-05 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 2e-05 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-05 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 6e-05 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 3e-04 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 4e-04 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 0.002 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 0.004 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 535 bits (1382), Expect = e-177
Identities = 197/389 (50%), Positives = 258/389 (66%), Gaps = 24/389 (6%)
Query: 140 KVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKAL 199
V V + P+ F+ YYNG N WPLFH D A F E W AY +VN++FAD + L
Sbjct: 70 TVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVL 129
Query: 200 QILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF 259
+ P D LVW+HDYHL+L +R E+ ++GFFLHIPFP +IFR
Sbjct: 130 R------PGD----LVWVHDYHLLLLPQMLR----ERGPDARIGFFLHIPFPSSEIFRCL 175
Query: 260 PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPI 319
PW +E+L+G+LG D++GF E Y NF+ CC R LG V VE+GGR VR+ PI
Sbjct: 176 PWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGG-VEYGGRRVRVGAFPI 234
Query: 320 AIPYERFVQLAQAAP--------RVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 371
I + F +LA + R +K+++GVDRLDY+KG+ RL AFE LLE++P
Sbjct: 235 GIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYP 294
Query: 372 EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDEL 431
E KV L+QIAVPSRTDV EYQ+L+ E+++LVGRING+F T +W+P+RY+Y + ++EL
Sbjct: 295 EWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREEL 354
Query: 432 ASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE 491
A+ YR A VALVTPLRDGMNLVAKE+VACQ ++ PGVLI+S FAGA E++ AL+ NPY+
Sbjct: 355 AALYRAADVALVTPLRDGMNLVAKEYVACQ-DDDPGVLILSEFAGAAEELSGALLVNPYD 413
Query: 492 IDAAAEVIHRALTMPEDERTLRMNYLRKR 520
ID A+ IHRALTMP +ER R LR+
Sbjct: 414 IDEVADAIHRALTMPLEERRERHRKLREY 442
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 467 bits (1203), Expect = e-151
Identities = 186/404 (46%), Positives = 248/404 (61%), Gaps = 27/404 (6%)
Query: 127 EDKVSDLLKTLQEKV--MSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
++ L L+ K+ V + + D YYNG N T WPLFH PD + + W AY
Sbjct: 51 DEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAY 110
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+VN+ FA+ LQ P D +VW+HDYHLML +R E ++ K+GF
Sbjct: 111 RRVNRLFAEALAPLLQ------PGD----IVWVHDYHLMLLPAMLR----ELGVQNKIGF 156
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLHIPFP +I+R PW E+L+G+L D+VGF D NF+ R LG
Sbjct: 157 FLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG-- 214
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQLAQAA---PRVIDTKQ-----KIVLGVDRLDYTKGL 356
VE GGRTVR+ PI I +RF + A+ R+ + ++ K+++GVDRLDY+KGL
Sbjct: 215 VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGL 274
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
RL AFE LE+HPE KV L+QIAVPSR DV EYQ L+ ++++LVGRINGRF T +W
Sbjct: 275 PERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDW 334
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
+PIRY+ ++EL + YR A V LVTPLRDGMNLVAKE+VA Q + GVLI+S FAG
Sbjct: 335 TPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQ-DPKDGVLILSEFAG 393
Query: 477 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
A ++++ AL+ NPY+ID A+ I RALTMP +ER R + +
Sbjct: 394 AAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDK 437
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 459 bits (1183), Expect = e-148
Identities = 184/454 (40%), Positives = 246/454 (54%), Gaps = 109/454 (24%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN++FAD + L+ P D LVW+HDYHL+L +R E+ ++
Sbjct: 113 AYVRVNRKFADAIAEVLR------PGD----LVWVHDYHLLLLPQMLR----ERGPDARI 158
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +IFR PW +E+L+G+LG D++GF E Y NF+ CC R LG V
Sbjct: 159 GFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG 218
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
VE+GGR VR+ PI I + F +LA + + +R
Sbjct: 219 G-VEYGGRRVRVGAFPIGIDPDAFRKLAASPE------------------VQERAAELRE 259
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+ +K+++GVDRLDY+KG+ RL AFE LLE++PE KV
Sbjct: 260 RLG-------------------GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKV 300
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+QIAVPSRTDV EYQ+L+ E+++LVGRING+F T +W+P+RY+Y + ++ELA+ YR
Sbjct: 301 VLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRA 360
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A VALVTPLRDGMNLVAKE+VACQ ++ PGVLI+S FAGA E++ AL+ NPY+ID A+
Sbjct: 361 ADVALVTPLRDGMNLVAKEYVACQ-DDDPGVLILSEFAGAAEELSGALLVNPYDIDEVAD 419
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
I H A
Sbjct: 420 AI--------------------------------------HRA----------------- 424
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
LTMP +ER R LR+ + HDV W SFL
Sbjct: 425 -LTMPLEERRERHRKLREYVRTHDVQAWANSFLD 457
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 469 bits (1208), Expect = e-148
Identities = 182/407 (44%), Positives = 247/407 (60%), Gaps = 27/407 (6%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHW 181
E ++ L+ L ++ V + + D YY G CN T WPLFH P+ F W
Sbjct: 56 ESEEQRARIEPRLEELG--LVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFW 113
Query: 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFK 241
+Y +VNQ FA+ I A P D +VW+HDY LML +R E+ +
Sbjct: 114 ESYERVNQRFAE------AIAAIARPGD----VVWVHDYQLMLLPAMLR----ERLPDAR 159
Query: 242 LGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK 301
+GFFLHIPFP +++FRL PW +EIL+G+LG D++GFH DY +F+ R LG +
Sbjct: 160 IGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG 219
Query: 302 NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP---RVIDTKQ-----KIVLGVDRLDYT 353
+ GGR VR+ P+ I Y++F AQ + +Q KI+L +DRLDYT
Sbjct: 220 E--IRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYT 277
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ RL AFE LEK+PE KV L+Q+AVPSRT V +YQ++K E+D+LVGRING F T
Sbjct: 278 KGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGT 337
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+W+PI Y Y + +EL + YR A VALVTPLRDGMNLVAKE+VA + + GVLI+S
Sbjct: 338 VDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDG-DGVLILSE 396
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
AGA ++ EAL+ NP +I+ A I RAL MPE+E+ RM +++R
Sbjct: 397 MAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQER 443
|
Length = 726 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 435 bits (1122), Expect = e-139
Identities = 177/407 (43%), Positives = 242/407 (59%), Gaps = 30/407 (7%)
Query: 127 EDKVSDLLKTLQEKVMSVHI--DPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
D+ SD LK + S + + ++ YYNG N WPLFH D + W AY
Sbjct: 71 TDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYERNWWDAY 130
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+VN++FADK ++ EP D ++W+HDYHL+L +R + K+GF
Sbjct: 131 VKVNRKFADKIVEIY------EPGD----IIWVHDYHLLLVPQMLRERIPDA----KIGF 176
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLHIPFP ++FR PW +EIL+G+LG D++GF E Y NF+D C R LG D
Sbjct: 177 FLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRF 236
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKIVLGVDRLDYT 353
GR V++ PI I E F + K +K+++GVDRLDY+
Sbjct: 237 NGADGRIVKVGAFPIGIDPEEF--ERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYS 294
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ RL AFE LLE++PE KV LLQIA PSR DV+EYQ L+ ++++LVGRING F +
Sbjct: 295 KGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+W+P+ Y++ + ++EL + YR A V LVTPLRDGMNLVAKE+VA Q + PGVLI+S
Sbjct: 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQ-RDKPGVLILSE 413
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
FAGA ++ +ALI NP++ A+ I RALTM +ER R L K+
Sbjct: 414 FAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQ 460
|
Length = 486 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 430 bits (1108), Expect = e-137
Identities = 181/417 (43%), Positives = 248/417 (59%), Gaps = 34/417 (8%)
Query: 119 VHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDR---AM 175
V E +D+VS LLK + + V +D + D YYNG N WPLFH
Sbjct: 54 VPVDEDEPKDRVSQLLKE-KFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNEDE 112
Query: 176 FCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE 235
F W AY +VN+ FADK I+ + D L+W+HDYHLML +R +
Sbjct: 113 FDRSWWDAYVKVNKLFADK------IVEVYKDGD----LIWVHDYHLMLLPQMLR----K 158
Query: 236 QNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG 295
+ K+GFFLHIPFP +IFR P +EIL+G+LG D++GFH DY +F+ CC R LG
Sbjct: 159 RLPDAKIGFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLG 218
Query: 296 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKIV 344
+ VE+GGRTV + PI I R + + K +K++
Sbjct: 219 LET-TSDGGVEYGGRTVSVGAFPIGIDPGRI--ESGLKSPSVQEKVKELKERFGNKKKLI 275
Query: 345 LGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLV 404
LGVDRLDY KG+ +L AFE LE++PE KV L+QIAVPSR DV+EYQ+L+ ++++LV
Sbjct: 276 LGVDRLDYIKGIPQKLLAFERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELV 335
Query: 405 GRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 464
GRING F T +++P+ +++ + DEL + Y A V LVT LRDGMNLVA E+VACQ +
Sbjct: 336 GRINGEFGTLDYTPVHHLHRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQ-QD 394
Query: 465 PPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
GVLI+S FAGA + +++ A++ NP++I+ AE I+ ALTM E+ER R L K
Sbjct: 395 RKGVLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKY 451
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 392 bits (1010), Expect = e-123
Identities = 173/454 (38%), Positives = 229/454 (50%), Gaps = 110/454 (24%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN+ FA+ LQ P D +VW+HDYHLML +R E ++ K+
Sbjct: 109 AYRRVNRLFAEALAPLLQ------PGD----IVWVHDYHLMLLPAMLR----ELGVQNKI 154
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +I+R PW E+L+G+L D+VGF D NF+ R LG
Sbjct: 155 GFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG 214
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
VE GGRTVR+ PI I +RF + A+ + I +R
Sbjct: 215 --VESGGRTVRVGAFPIGIDVDRFAEQAKK------------------PSVQKRIAELRE 254
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
S+ +K+++GVDRLDY+KGL RL AFE LE+HPE KV
Sbjct: 255 SLK-------------------GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKV 295
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+QIAVPSR DV EYQ L+ ++++LVGRINGRF T +W+PIRY+ ++EL + YR
Sbjct: 296 VLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRA 355
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A V LVTPLRDGMNLVAKE+VA Q + GVLI+S FAGA ++++ AL+ NPY+ID A+
Sbjct: 356 ADVGLVTPLRDGMNLVAKEYVAAQ-DPKDGVLILSEFAGAAQELNGALLVNPYDIDGMAD 414
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
I AL
Sbjct: 415 AI--------------------------------------ARAL---------------- 420
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
TMP +ER R + + + +DV W FL
Sbjct: 421 --TMPLEEREERHRAMMDKLRKNDVQRWREDFLS 452
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 402 bits (1036), Expect = e-123
Identities = 176/476 (36%), Positives = 240/476 (50%), Gaps = 112/476 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
+Y +VNQ FA+ I A P D +VW+HDY LML +R E+ ++
Sbjct: 115 SYERVNQRFAE------AIAAIARPGD----VVWVHDYQLMLLPAMLR----ERLPDARI 160
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +++FRL PW +EIL+G+LG D++GFH DY +F+ R LG +
Sbjct: 161 GFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGE 220
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
+ GGR VR+ P+ I Y++F AQ + E IR
Sbjct: 221 --IRLGGRIVRVDAFPMGIDYDKFHNSAQ---------------------DPEVQEEIR- 256
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+L Q +KI+L +DRLDYTKG+ RL AFE LEK+PE KV
Sbjct: 257 ----------RLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKV 301
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+Q+AVPSRT V +YQ++K E+D+LVGRING F T +W+PI Y Y + +EL + YR
Sbjct: 302 RLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRA 361
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A VALVTPLRDGMNLVAKE+VA + + GVLI+S AG AAAE
Sbjct: 362 ADVALVTPLRDGMNLVAKEYVASRTDG-DGVLILSEMAG-----------------AAAE 403
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
+ EAL+ NP +I+ A I R
Sbjct: 404 ---------------------------------------LAEALLVNPNDIEGIAAAIKR 424
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGDDVLPTTLIADE 1013
AL MPE+E+ RM +++R + +DV+ W FL + + + + I
Sbjct: 425 ALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELRE--AAEKNKAFASKPITPA 478
|
Length = 726 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-116
Identities = 171/455 (37%), Positives = 236/455 (51%), Gaps = 109/455 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN+ FADK I+ + D L+W+HDYHLML +R ++ K+
Sbjct: 120 AYVKVNKLFADK------IVEVYKDGD----LIWVHDYHLMLLPQMLR----KRLPDAKI 165
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +IFR P +EIL+G+LG D++GFH DY +F+ CC R LG +
Sbjct: 166 GFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLET-TSD 224
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
VE+GGRTV + PI I R + + K ++ ++
Sbjct: 225 GGVEYGGRTVSVGAFPIGIDPGRI--ESGLKSPSVQEK----------------VKELK- 265
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
ERF K+K++LGVDRLDY KG+ +L AFE LE++PE KV
Sbjct: 266 ------ERFGN-----------KKKLILGVDRLDYIKGIPQKLLAFERFLEEYPEWRGKV 308
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+QIAVPSR DV+EYQ+L+ ++++LVGRING F T +++P+ +++ + DEL + Y
Sbjct: 309 VLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRSLDFDELIALYAI 368
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAA 896
A V LVT LRDGMNLVA E+VACQ + GVLI+S FAGA + +++ A++ NP++I+ A
Sbjct: 369 ADVCLVTSLRDGMNLVAYEYVACQ-QDRKGVLILSEFAGAAQSLNDGAILVNPWDIEEVA 427
Query: 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIH 956
E I +EAL
Sbjct: 428 EAI--------------------------------------NEAL--------------- 434
Query: 957 RALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
TM E+ER R L K HDV YW SFL
Sbjct: 435 ---TMSEEERQKRHRKLFKYISKHDVQYWAESFLS 466
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 364 bits (936), Expect = e-112
Identities = 166/454 (36%), Positives = 226/454 (49%), Gaps = 107/454 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN++FADK ++ EP D ++W+HDYHL+L +R + K+
Sbjct: 129 AYVKVNRKFADKIVEIY------EPGD----IIWVHDYHLLLVPQMLRERIPDA----KI 174
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP ++FR PW +EIL+G+LG D++GF E Y NF+D C R LG D
Sbjct: 175 GFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADI 234
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
GR V++ PI I E F + K
Sbjct: 235 RFNGADGRIVKVGAFPIGIDPEEF--ERALKSPSVQEKVL-------------------- 272
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+L R +K+++GVDRLDY+KG+ RL AFE LLE++PE KV
Sbjct: 273 ----------ELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
LLQIA PSR DV+EYQ L+ ++++LVGRING F + +W+P+ Y++ + ++EL + YR
Sbjct: 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA 378
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A V LVTPLRDGMNLVAKE+VA Q + PGVLI+S FAGA ++ +ALI NP++ A
Sbjct: 379 ADVMLVTPLRDGMNLVAKEYVAAQ-RDKPGVLILSEFAGAASELRDALIVNPWDTKEVA- 436
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
+ + AL
Sbjct: 437 -------------------------------------DAIKRAL---------------- 443
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
TM +ER R L K+ HDV W SFL
Sbjct: 444 --TMSLEERKERHEKLLKQVLTHDVARWANSFLD 475
|
Length = 486 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 325 bits (835), Expect = 6e-94
Identities = 171/410 (41%), Positives = 227/410 (55%), Gaps = 45/410 (10%)
Query: 133 LLKTLQEK-VMSVHIDPKIFDSYYNGCCNGTFWPLFHSMP----DRAM----FCAEHWRA 183
L K L EK + V +D +I YYNG CN WPLFH + DR F ++ + A
Sbjct: 155 LTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAA 213
Query: 184 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 243
Y + NQ FAD + + D +VW HDYHLM ++ E N K+G
Sbjct: 214 YKKANQMFADVVNEHYE------EGD----VVWCHDYHLMFLPKCLK----EYNSNMKVG 259
Query: 244 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNL 303
+FLH PFP +I R P E+L+ +L D+VGFH DY +FV C R LG +
Sbjct: 260 WFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEG- 318
Query: 304 LVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID---------TKQKIVLGVDRLDYTK 354
VE GR R+ PI I +RF++ A P+V +K++LGVDRLD K
Sbjct: 319 -VEDQGRLTRVAAFPIGIDSDRFIR-ALETPQVQQHIKELKERFAGRKVMLGVDRLDMIK 376
Query: 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 414
G+ ++ AFE LE++PE +KV LLQIAVP+RTDV EYQ L ++ ++VGRINGRF T
Sbjct: 377 GIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTL 436
Query: 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474
PI ++ + L + Y VALVT LRDGMNLV+ EFVACQ + GVLI+S F
Sbjct: 437 TAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DSKKGVLILSEF 495
Query: 475 AGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523
AGA + + A++ NP+ I A I +AL MPE+ER KR +H
Sbjct: 496 AGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEER-------EKRHRH 538
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 306 bits (784), Expect = 2e-88
Identities = 158/398 (39%), Positives = 225/398 (56%), Gaps = 35/398 (8%)
Query: 133 LLKTLQEK-VMSVHIDPKIFDSYYNGCCNGTFWPLFHSM--P-----DRAMFCAEHWRAY 184
L ++L EK + V ++ ++FD YYNG CN WP+FH M P D + AY
Sbjct: 72 LTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAY 130
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+ N+ F D + E D +VW HDYHLM ++ E N K K+G+
Sbjct: 131 KKANRMFLD------VVKENYEEGD----VVWCHDYHLMFLPQYLK----EYNNKMKVGW 176
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLH PFP +I++ P E+L+ +L D++GFH D+ +F+ C R LG V+ +
Sbjct: 177 FLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILG--VEGTHEG 234
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQ---LAQAAPRVIDTK-----QKIVLGVDRLDYTKGL 356
V G+ R+ PI I ERF+ L + + + K +K++LGVDRLD KG+
Sbjct: 235 VVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGI 294
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
+ AFE LE++PE +KV L+QIAVP+R DV EYQ LK ++ +LVGRINGRF + +
Sbjct: 295 PQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSS 354
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
PI ++ + + L + Y V LVT LRDGMNLV+ EFVACQ + GVL++S FAG
Sbjct: 355 VPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK-KGVLVLSEFAG 413
Query: 477 AGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLR 513
AG+ + AL+ NP+ I + I AL M ++ER R
Sbjct: 414 AGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETR 451
|
Length = 797 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 285 bits (732), Expect = 9e-85
Identities = 145/374 (38%), Positives = 206/374 (55%), Gaps = 26/374 (6%)
Query: 151 FDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADS 210
+D YYN N WP FH D F W Y +VN ADK L L +++
Sbjct: 73 YDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADK----LLPLLKDDD--- 125
Query: 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML 270
++WIHDYHL+ A+ +R ++ + ++GFFLHIPFP +IF P DE+L+ +
Sbjct: 126 ---IIWIHDYHLLPFASELR----KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLC 178
Query: 271 GCDMVGFHIEDYCLNFVDCC--QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ 328
D++GF E+ L F+DC R+ R + + G+ R PI I + +
Sbjct: 179 DYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSH---TAWGKAFRTEVYPIGIEPDEIAK 235
Query: 329 LAQAA--PRVIDTKQKI-----VLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQ 381
A P++ K ++ + V+RLDY+KGL R A+E LLEK+P+H K+ Q
Sbjct: 236 QAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 295
Query: 382 IAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441
IA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L +R + V
Sbjct: 296 IAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVG 355
Query: 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 501
LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A + R
Sbjct: 356 LVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDR 415
Query: 502 ALTMPEDERTLRMN 515
ALTMP ER R
Sbjct: 416 ALTMPLAERISRHA 429
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 274 bits (701), Expect = 2e-80
Identities = 139/391 (35%), Positives = 216/391 (55%), Gaps = 44/391 (11%)
Query: 152 DSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSG 211
D +Y+ FWP+ H+ P+R F + W+ + +VN+ FA+ A E A+
Sbjct: 83 DIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEA--------ACLEAAEGA 134
Query: 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLG 271
T VW+HDY+L L IR + K+ FF H PFP D+F + PW ++I+ +L
Sbjct: 135 T--VWVHDYNLWLVPGYIR----QLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLC 188
Query: 272 CDMVGFHIEDYCLNFVD---------------CCQR--RLGCRV--DRKNLLVEHGGRTV 312
CD +GFHI Y NFVD R +G + +R ++ G R V
Sbjct: 189 CDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV 248
Query: 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKI---------VLGVDRLDYTKGLVHRLKAF 363
++ P+ ER ++ A AA + + ++I +L +R+DYTKG++ +L A+
Sbjct: 249 KLGAHPVGTDPER-IRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAY 307
Query: 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY 423
E LLE+ PE L KVTL+ VP+ + + Y +L+ +++Q VGRINGRF W+P+++
Sbjct: 308 ERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFT 367
Query: 424 GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 483
+ +E+++++ A V +TPLRDG+NLVAKE+VA Q GVL++S FAGA ++
Sbjct: 368 RSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ-GLLDGVLVLSEFAGAAVELKG 426
Query: 484 ALICNPYEIDAAAEVIHRALTMPEDERTLRM 514
AL+ NPY+ E I+ AL MP+ E+ RM
Sbjct: 427 ALLTNPYDPVRMDETIYVALAMPKAEQQARM 457
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 1e-75
Identities = 158/469 (33%), Positives = 215/469 (45%), Gaps = 109/469 (23%)
Query: 531 SLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE 590
S +AY + NQ FAD + + D +VW HDYHLM ++ E
Sbjct: 206 SFQSQFAAYKKANQMFADVVNEHYE------EGD----VVWCHDYHLMFLPKCLK----E 251
Query: 591 QNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG 650
N K+G+FLH PFP +I R P E+L+ +L D+VGFH DY +FV C R LG
Sbjct: 252 YNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILG 311
Query: 651 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKG 710
+ VE GR R+ PI I +RF++ A P+V +++
Sbjct: 312 LEGTPEG--VEDQGRLTRVAAFPIGIDSDRFIR-ALETPQVQQHIKEL------------ 356
Query: 711 LIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 770
ERF +K++LGVDRLD KG+ ++ AFE LE++
Sbjct: 357 ------------KERF------------AGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 392
Query: 771 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDE 830
PE +KV LLQIAVP+RTDV EYQ L ++ ++VGRINGRF T PI ++ +
Sbjct: 393 PEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHA 452
Query: 831 LASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890
L + Y VALVT LRDGMNLV+ EFVACQ + GVLI+S FAGA + +
Sbjct: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DSKKGVLILSEFAGAAQSL--------- 502
Query: 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 950
GAG A++ NP+ I
Sbjct: 503 -----------------------------------------GAG-----AILVNPWNITE 516
Query: 951 AAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITE 999
A I +AL MPE+ER R + H W +F+ + + E
Sbjct: 517 VAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVE 565
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 1e-71
Identities = 150/483 (31%), Positives = 216/483 (44%), Gaps = 115/483 (23%)
Query: 523 HMNCPGQSSLGGNTS------AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYH 576
+M P + + AY + N+ F D + E D +VW HDYH
Sbjct: 108 YMGLPQEDRHDATRTFESQYDAYKKANRMFLD------VVKENYEEGD----VVWCHDYH 157
Query: 577 LMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIED 636
LM ++ E N K K+G+FLH PFP +I++ P E+L+ +L D++GFH D
Sbjct: 158 LMFLPQYLK----EYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYD 213
Query: 637 YCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQ 696
+ +F+ C R LG V+ + V G+ R+ PI I ERF+ P V +
Sbjct: 214 FARHFLSACTRILG--VEGTHEGVVDQGKVTRVAVFPIGIDPERFIN-TCELPEVKQHMK 270
Query: 697 KIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGL 756
++ F +K++LGVDRLD KG+
Sbjct: 271 ELK------------------------RFF------------AGRKVILGVDRLDMIKGI 294
Query: 757 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816
+ AFE LE++PE +KV L+QIAVP+R DV EYQ LK ++ +LVGRINGRF + +
Sbjct: 295 PQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSS 354
Query: 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876
PI ++ + + L + Y V LVT LRDGMNLV+ EFVACQ + GVL++S FAG
Sbjct: 355 VPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK-KGVLVLSEFAG 413
Query: 877 AGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 936
AG+ + GAG
Sbjct: 414 AGQSL--------------------------------------------------GAG-- 421
Query: 937 MHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996
AL+ NP+ I + I AL M ++ER R + + K H W F+ + +
Sbjct: 422 ---ALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDI 478
Query: 997 ITE 999
I E
Sbjct: 479 IVE 481
|
Length = 797 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 4e-66
Identities = 152/432 (35%), Positives = 220/432 (50%), Gaps = 52/432 (12%)
Query: 123 PTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSM----PDRA-MFC 177
E E+ LL+T K + + P +F YY+G C WPLFH M PD F
Sbjct: 119 LNEQEEVSQILLETF--KCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFN 176
Query: 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQN 237
W+AY VN+ FAD+ ++ + P D VWIHDYHLM+ +R +
Sbjct: 177 RSLWQAYVSVNKIFADRIMEVIN------PEDD---FVWIHDYHLMVLPTFLRKRFN--- 224
Query: 238 LKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR 297
+ KLGFFLH PFP +I++ P +E+L+ +L D++GFH DY +F+ CC R LG
Sbjct: 225 -RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLS 283
Query: 298 VDRKN--LLVEHGGRTVRIRPLPIAIPY----------ERFVQLAQAAPRVIDTKQKIVL 345
+ K + +E+ GRTV I+ LP+ I E ++ + + D + ++L
Sbjct: 284 YESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLL 343
Query: 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 405
GVD +D KG+ +L A E LL +HPE KV L+QIA P+R K+ ++++ E V
Sbjct: 344 GVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403
Query: 406 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEF-VACQINE 464
RIN F P + PI I + E ++Y A LVT +RDGMNL+ E+ ++ Q NE
Sbjct: 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 463
Query: 465 -------------PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERT 511
+L+VS F G + A+ NP+ IDA A+ + AL M E E+
Sbjct: 464 KLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQ 523
Query: 512 LRMNYLRKREKH 523
LR EKH
Sbjct: 524 LR------HEKH 529
|
Length = 854 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 7e-65
Identities = 139/473 (29%), Positives = 214/473 (45%), Gaps = 127/473 (26%)
Query: 539 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 598
+ +VN+ FA+ A E A+ T VW+HDY+L L IR + K+
Sbjct: 115 FLKVNRAFAEA--------ACLEAAEGAT--VWVHDYNLWLVPGYIR----QLRPDLKIA 160
Query: 599 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD--------------- 643
FF H PFP D+F + PW ++I+ +L CD +GFHI Y NFVD
Sbjct: 161 FFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQN 220
Query: 644 CCQR--RLGCRV--DRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIV 699
R +G + +R ++ G R V++ P+ ER ++ A AA +
Sbjct: 221 VDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPER-IRSALAAASI-------- 271
Query: 700 LGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 759
+ ++E IR+ +A K++L +R+DYTKG++ +
Sbjct: 272 ---------REMMERIRSELA-------------------GVKLILSAERVDYTKGILEK 303
Query: 760 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819
L A+E LLE+ PE L KVTL+ VP+ + + Y +L+ +++Q VGRINGRF W+P+
Sbjct: 304 LNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPL 363
Query: 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879
++ + +E+++++ A V +TPLRDG+NLVAKE+VA Q GVL++S FAGA
Sbjct: 364 QFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ-GLLDGVLVLSEFAGAAV 422
Query: 880 QMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 939
++ AL+ NPY +M E
Sbjct: 423 ELKGALLTNPY------------------------------------------DPVRMDE 440
Query: 940 ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKG 992
I+ AL MP+ E+ RM + +DV W FL
Sbjct: 441 T--------------IYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAA 479
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 4e-64
Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 61/362 (16%)
Query: 539 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 598
Y +VN ADK L L +++ ++WIHDYHL+ A+ +R ++ + ++G
Sbjct: 106 YLRVNALLADK----LLPLLKDDD------IIWIHDYHLLPFASELR----KRGVNNRIG 151
Query: 599 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC--QRRLGCRVDRK 656
FFLHIPFP +IF P DE+L+ + D++GF E+ L F+DC R+ R +
Sbjct: 152 FFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKS 211
Query: 657 NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA--PRVIDTKQKIVLGVDRLDYTKGLIES 714
+ G+ R PI I + + A P++ K ++ ++
Sbjct: 212 H---TAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAEL--------------KN 254
Query: 715 IRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL 774
++N + V+RLDY+KGL R A+E LLEK+P+H
Sbjct: 255 VQNIFS--------------------------VERLDYSKGLPERFLAYEALLEKYPQHH 288
Query: 775 EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834
K+ QIA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L
Sbjct: 289 GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKI 348
Query: 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894
+R + V LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D
Sbjct: 349 FRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDE 408
Query: 895 AA 896
A
Sbjct: 409 VA 410
|
Length = 474 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 208 bits (530), Expect = 3e-55
Identities = 148/478 (30%), Positives = 219/478 (45%), Gaps = 97/478 (20%)
Query: 523 HMNCPGQSSLGG--NTS---AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHL 577
H P LGG N S AY VN+ FAD+ ++ + P D VWIHDYHL
Sbjct: 162 HYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVIN------PEDD---FVWIHDYHL 212
Query: 578 MLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDY 637
M+ +R + + KLGFFLH PFP +I++ P +E+L+ +L D++GFH DY
Sbjct: 213 MVLPTFLRKRFN----RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDY 268
Query: 638 CLNFVDCCQRRLGCRVDRKN--LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 695
+F+ CC R LG + K + +E+ GRTV I+ LP+ I + Q+ + +T+
Sbjct: 269 ARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQL----QSVLSLPETE 324
Query: 696 QKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKG 755
K+ K LI+ + D + ++LGVD +D KG
Sbjct: 325 AKV----------KELIK---------------------QFCDQDRIMLLGVDDMDIFKG 353
Query: 756 LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815
+ +L A E LL +HPE KV L+QIA P+R K+ ++++ E V RIN F P
Sbjct: 354 ISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPG 413
Query: 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875
+ PI I + E ++Y A LVT +RDGMNL+ E++ +
Sbjct: 414 YDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISR-------------- 459
Query: 876 GAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 935
E++ + L P +L+VS F G
Sbjct: 460 QGNEKLDKLLGLEPS----------------------------TPKKSMLVVSEFIGCSP 491
Query: 936 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGM 993
+ A+ NP+ IDA A+ + AL M E E+ LR + HDV YW RSFL+ +
Sbjct: 492 SLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDL 549
|
Length = 854 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 173 bits (442), Expect = 2e-46
Identities = 58/133 (43%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E+ ++GFFLHIPFP +IFR PW +E+L+G+LG D++GF E Y NF+ CC R L
Sbjct: 151 ERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLL 210
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP--------RVIDTKQKIVLG 1180
G V VE+GGR VR+ PI I + F +LA + R +K+++G
Sbjct: 211 GLEVTDDG-GVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVG 269
Query: 1181 VDRLDYTKGLVHR 1193
VDRLDY+KG+ R
Sbjct: 270 VDRLDYSKGIPER 282
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 143 bits (364), Expect = 2e-36
Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 10/133 (7%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E ++ K+GFFLHIPFP +I+R PW E+L+G+L D+VGF D NF+ R L
Sbjct: 147 ELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSREL 206
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA---PRVIDTKQ-----KIVLG 1180
G VE GGRTVR+ PI I +RF + A+ R+ + ++ K+++G
Sbjct: 207 GLETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIG 264
Query: 1181 VDRLDYTKGLVHR 1193
VDRLDY+KGL R
Sbjct: 265 VDRLDYSKGLPER 277
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 4e-36
Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
++ K+GFFLHIPFP +IFR P +EIL+G+LG D++GFH DY +F+ CC R L
Sbjct: 158 KRLPDAKIGFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLL 217
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKI 1177
G + VE+GGRTV + PI I R + + K +K+
Sbjct: 218 GLET-TSDGGVEYGGRTVSVGAFPIGIDPGRI--ESGLKSPSVQEKVKELKERFGNKKKL 274
Query: 1178 VLGVDRLDYTKGLVHR 1193
+LGVDRLDY KG+ +
Sbjct: 275 ILGVDRLDYIKGIPQK 290
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 3e-35
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 1075 KLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDR 1134
K+GFFLHIPFP ++FR PW +EIL+G+LG D++GF E Y NF+D C R LG D
Sbjct: 173 KIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA 232
Query: 1135 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKIVLGVDR 1183
GR V++ PI I E F + K +K+++GVDR
Sbjct: 233 DIRFNGADGRIVKVGAFPIGIDPEEF--ERALKSPSVQEKVLELKAELGRNKKLIVGVDR 290
Query: 1184 LDYTKGLVHR 1193
LDY+KG+ R
Sbjct: 291 LDYSKGIPQR 300
|
Length = 486 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 5e-34
Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 1075 KLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDR 1134
++GFFLHIPFP +++FRL PW +EIL+G+LG D++GFH DY +F+ R LG +
Sbjct: 159 RIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL 218
Query: 1135 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP---RVIDTKQ-----KIVLGVDRLDY 1186
+ GGR VR+ P+ I Y++F AQ + +Q KI+L +DRLDY
Sbjct: 219 GE--IRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDY 276
Query: 1187 TKGLVHR 1193
TKG+ R
Sbjct: 277 TKGIPRR 283
|
Length = 726 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 2e-22
Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E N K+G+FLH PFP +I R P E+L+ +L D+VGFH DY +FV C R L
Sbjct: 251 EYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRIL 310
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID---------TKQKIVL 1179
G + VE GR R+ PI I +RF++ A P+V +K++L
Sbjct: 311 GLEGTPEG--VEDQGRLTRVAAFPIGIDSDRFIR-ALETPQVQQHIKELKERFAGRKVML 367
Query: 1180 GVDRLDYTKGL 1190
GVDRLD KG+
Sbjct: 368 GVDRLDMIKGI 378
|
Length = 934 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 3e-21
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 905 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964
GMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A + RALTMP
Sbjct: 363 GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLA 422
Query: 965 ERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGDDVLPTTLIADEQN 1015
ER R + +D+N+W F+ D ++P + + +++
Sbjct: 423 ERISRHAEMLDVIVKNDINHWQECFIS--------DLKQIVPRSAESQQRD 465
|
Length = 474 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 96.1 bits (239), Expect = 6e-20
Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E N K K+G+FLH PFP +I++ P E+L+ +L D++GFH D+ +F+ C R L
Sbjct: 167 EYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRIL 226
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ---LAQAAPRVIDTK-----QKIVLG 1180
G V+ + V G+ R+ PI I ERF+ L + + + K +K++LG
Sbjct: 227 G--VEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILG 284
Query: 1181 VDRLDYTKGL 1190
VDRLD KG+
Sbjct: 285 VDRLDMIKGI 294
|
Length = 797 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 2e-19
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 42 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLT 101
LDYDGTL+PI PD AV + L +LA+ P ++IISGR+ G+ L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFEDLFFGVPNLG 60
Query: 102 YAGNHGLEIIHPDG-SRFVHPIPTEFEDKVSDLLKTLQEKV 141
A HG I P G + + K ++ L+E
Sbjct: 61 LAAEHGAFIRDPGGEDWTNLAEVEDLDWK-KEVAAILEEYT 100
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 3e-19
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 22 LEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHIS 81
++ L Y+ K L LDYDGTL I PHP+ AV + LQ LA+ P ++
Sbjct: 3 ALQSNQLLEPYL-NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVA 61
Query: 82 IISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS 116
IISGR++ + + G+ G+ HG E+ P+G
Sbjct: 62 IISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGK 96
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 7e-19
Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 97
K A DYDGTL+ I P PD AV+ + LQKLA P I IISGR V +
Sbjct: 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKL 62
Query: 98 EGLTYAGNHGLEIIHPDGS 116
GL AG HG E+ +GS
Sbjct: 63 PGLGLAGEHGCEMK-DNGS 80
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 2e-18
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 1073 KFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRV 1132
+ KLGFFLH PFP +I++ P +E+L+ +L D++GFH DY +F+ CC R LG
Sbjct: 225 RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSY 284
Query: 1133 DRKN--LLVEHGGRTVRIRPLPIAIPY----------ERFVQLAQAAPRVIDTKQKIVLG 1180
+ K + +E+ GRTV I+ LP+ I E ++ + + D + ++LG
Sbjct: 285 ESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLG 344
Query: 1181 VDRLDYTKGL 1190
VD +D KG+
Sbjct: 345 VDDMDIFKGI 354
|
Length = 854 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 81.1 bits (200), Expect = 1e-15
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD------ 1122
+ K+ FF H PFP D+F + PW ++I+ +L CD +GFHI Y NFVD
Sbjct: 152 QLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLM 211
Query: 1123 ---------CCQR--RLGCRV--DRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR 1169
R +G + +R ++ G R V++ P+ ER ++ A AA
Sbjct: 212 PLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPER-IRSALAAAS 270
Query: 1170 VIDTKQKI---------VLGVDRLDYTKG 1189
+ + ++I +L +R+DYTKG
Sbjct: 271 IREMMERIRSELAGVKLILSAERVDYTKG 299
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 4e-15
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96
++ LLLDYDGTL P AP P++AV +E + L++LA P+ ++IISGR+ + G
Sbjct: 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550
Query: 97 IEGLTYAGNHGLEIIHPDGS-RFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPK 149
+ HG P G + + P+ TE++D V +L+ ++ I+ K
Sbjct: 551 DLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEK 604
|
Length = 726 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 30/66 (45%), Positives = 34/66 (51%)
Query: 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454
K A DYDGTL+ I P PD AV+ + LQKLA P I IISGR V +
Sbjct: 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKL 62
Query: 1455 EGLTYA 1460
GL A
Sbjct: 63 PGLGLA 68
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 9e-14
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 8 LSKNELFILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKR 67
+K +I + L F+E L K G ++ + LDYDGTL+PI PD A + ++ +
Sbjct: 70 FNKQSCWIKEHPSALNMFEEILHKSEG--KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRN 127
Query: 68 TLQKLAN-LPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPD-GSRF------- 118
T++KLA P +I+SGR V V + L YAG+HG++I P+ GS++
Sbjct: 128 TVRKLAKCFP---TAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSL 184
Query: 119 -VHPIPTEFEDKVSDLLKTLQEKVMSV 144
P TEF ++++ K L EK S+
Sbjct: 185 LCQP-ATEFLPVINEVYKKLVEKTKSI 210
|
Length = 354 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 2e-13
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 1075 KLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC--QRRLGCRV 1132
++GFFLHIPFP +IF P DE+L+ + D++GF E+ L F+DC R+ R
Sbjct: 149 RIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRS 208
Query: 1133 DRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA--PRVIDTKQKI-----VLGVDRLD 1185
+ + G+ R PI I + + A P++ K ++ + V+RLD
Sbjct: 209 GKSH---TAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLD 265
Query: 1186 YTKGLVHR 1193
Y+KGL R
Sbjct: 266 YSKGLPER 273
|
Length = 474 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 2e-13
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1379 LEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHIS 1438
++ L Y+ K L LDYDGTL I PHP+ AV + LQ LA+ P ++
Sbjct: 3 ALQSNQLLEPYL-NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVA 61
Query: 1439 IISGRNVHNVMEMVGIEGLTYA 1460
IISGR++ + + G+ G+
Sbjct: 62 IISGRSLAELERLFGVPGIGLI 83
|
Length = 266 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 6e-13
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLAN-LPDVHISIISGRNVHNVMEMVG 96
K+AL LDYDGTL+PI PD A++ + + ++ +A P +IISGR+ V E+VG
Sbjct: 119 KIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFP---TAIISGRSRDKVYELVG 175
Query: 97 IEGLTYAGNHGLEIIHP 113
+ L YAG+HG++I+ P
Sbjct: 176 LTELYYAGSHGMDIMGP 192
|
Length = 384 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 1399 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLT 1458
LDYDGTL+PI PD AV + L +LA+ P ++IISGR+ G+ L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFEDLFFGVPNLG 60
Query: 1459 YA 1460
A
Sbjct: 61 LA 62
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 3e-12
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444
++ LLLDYDGTL P AP P++AV +E + L++LA P+ ++IISGR+
Sbjct: 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD 541
|
Length = 726 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 3e-11
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 14 FILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLA 73
+I++ LE F++ + G ++ + LDYDGTL+PI PD A + + +RT++KLA
Sbjct: 89 WIMQHPSALEMFEQIMEASRG--KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA 146
Query: 74 N-LPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDG--SRFVHPIPTEFEDKV 130
P +I++GR + V V + L YAG+HG++I P SR +
Sbjct: 147 KCFP---TAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPA 203
Query: 131 SDLLKTLQE 139
+D L + E
Sbjct: 204 NDYLPMIDE 212
|
Length = 366 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 35 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94
+ A D DGTLA I PHPD V+P+ + LQ LA D +++ISGR+ M
Sbjct: 11 LSANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRS------M 64
Query: 95 VGIEGLTY------AGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKT 136
V ++ L AG HG E +G + +P +S L T
Sbjct: 65 VELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHT 112
|
Length = 266 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 7e-09
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 1373 TMQPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLAN- 1431
P L F+E L K G ++ + LDYDGTL+PI PD A + ++ + T++KLA
Sbjct: 78 KEHPSALNMFEEILHKSEG--KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC 135
Query: 1432 LPDVHISIISGRNVHNVMEMVGIEGLTYA 1460
P +I+SGR V V + L YA
Sbjct: 136 FP---TAIVSGRCREKVSSFVKLTELYYA 161
|
Length = 354 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 8e-09
Identities = 60/248 (24%), Positives = 97/248 (39%), Gaps = 41/248 (16%)
Query: 291 QRRLGCRVDR--------KNLLVEHGGRTV-RIRPLPIAIPYERF--VQLAQAAPRVIDT 339
+RR R DR + L E GG +I +P + ERF A I
Sbjct: 138 ERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPE 197
Query: 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 399
+ ++L V RL KG+ L+A L +++P+ V L+ I D ++L+
Sbjct: 198 DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD----VRLV-IV----GDGPLREELEAL 248
Query: 400 MDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 459
+L F G + ++L + Y A V ++ L +G LV E +A
Sbjct: 249 AAELGLGDRVTFL-----------GFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMA 297
Query: 460 CQINEPPGV-LIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMN 515
G+ ++ S G E + + L+ P + +A AE I R L PE R L
Sbjct: 298 A------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEA 351
Query: 516 YLRKREKH 523
+ +
Sbjct: 352 ARERVAER 359
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 1392 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443
+ A D DGTLA I PHPD V+P+ + LQ LA D +++ISGR
Sbjct: 11 LSANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGR 62
|
Length = 266 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 2e-08
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 1354 ILKGMGTLITEDGDDVLPTTMQ---PVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIA 1410
+ K + D T P L F++ + G K+AL LDYDGTL+PI
Sbjct: 77 LNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIANFAKG--KKIALFLDYDGTLSPIV 134
Query: 1411 PHPDMAVLPEETKRTLQKLAN-LPDVHISIISGRNVHNVMEMVGIEGLTYA 1460
PD A++ + + ++ +A P +IISGR+ V E+VG+ L YA
Sbjct: 135 DDPDRALMSDAMRSAVKNVAKYFP---TAIISGRSRDKVYELVGLTELYYA 182
|
Length = 384 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-08
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 1013 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLG 1049
E ++ K+GFFLHIPFP +I+R PW E+L+G+L
Sbjct: 147 ELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLA 183
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 1e-07
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLAN-LP 1433
P LE F++ + G ++ + LDYDGTL+PI PD A + + +RT++KLA P
Sbjct: 93 HPSALEMFEQIMEASRG--KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFP 150
Query: 1434 DVHISIISGRNVHNVMEMVGIEGLTYA 1460
+I++GR + V V + L YA
Sbjct: 151 ---TAIVTGRCIDKVYNFVKLAELYYA 174
|
Length = 366 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 53.4 bits (127), Expect = 5e-07
Identities = 54/314 (17%), Positives = 103/314 (32%), Gaps = 43/314 (13%)
Query: 214 LVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCD 273
++ H L + + + IP L
Sbjct: 86 IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL-----------G 134
Query: 274 MVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA 333
++ ++ R + K LL G +I +P I E+F
Sbjct: 135 LLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVPN-KIVVIPNGIDTEKFAPARIGL 193
Query: 334 PRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY 393
+ + +VL V RLD KGL ++A L ++ P+ + L+ + +
Sbjct: 194 LP--EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGP----ERR 243
Query: 394 QDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 453
++L++ +L N +F + +ELA A V ++ L +G LV
Sbjct: 244 EELEKLAKKLGLEDNVKFLGY-----------VPDEELAELLASADVFVLPSLSEGFGLV 292
Query: 454 AKEFVACQINEPPGVLIVSPFAGAG----EQMHEALICNPYEIDAAAEVIHRALTMPEDE 509
E +A G +++ G E L+ P +++ A+ + + L PE
Sbjct: 293 LLEAMAA------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELR 346
Query: 510 RTLRMNYLRKREKH 523
L + E+
Sbjct: 347 EELGEAARERVEEE 360
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 33/186 (17%)
Query: 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 399
+ I+L V RL KGL L+AF L E+HP L I D +E + LK+
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPN-----LKLVIV----GDGEEEKKLKKL 51
Query: 400 MDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 459
+L N F G + ++L YR A + ++ +G LV E +A
Sbjct: 52 ALKLGLEDNVIFV-----------GFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMA 100
Query: 460 CQINEPPGV-LIVSPFAGAGEQM---HEALICNPYEIDAAAEVIHRALTMPEDERTLRMN 515
GV +I + G E + L+ +P + +A AE I + L +DE
Sbjct: 101 A------GVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLL---KDEELRERL 151
Query: 516 YLRKRE 521
R+
Sbjct: 152 GENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 799
+ I+L V RL KGL L+AF L E+HP L I D +E + LK+
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPN-----LKLVIV----GDGEEEKKLKKL 51
Query: 800 MDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 859
+L N F G + ++L YR A + ++ +G LV E +A
Sbjct: 52 ALKLGLEDNVIFV-----------GFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMA 100
Query: 860 CQINEPPGV-LIVSPFAGAGEQM---HEALICNPYEIDAAAEVI 899
GV +I + G E + L+ +P + +A AE I
Sbjct: 101 A------GVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAI 138
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-05
Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 20/214 (9%)
Query: 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN---VHNVM 92
L D DGTL + + ETK L +L V + + +GR V +++
Sbjct: 1 MMIKLLAFDLDGTLL----DSNKTI-SPETKEALARLREK-GVKVVLATGRPLPDVLSIL 54
Query: 93 EMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFD 152
E +G++G N G I + F P+ E +++ +LL+ Q + ++ D I+
Sbjct: 55 EELGLDGPLITFN-GALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYL 113
Query: 153 SYYNGCCNGTFWPLFHSMPDRAMFCAEHW-RAYAQVNQEFADKTIKALQILAQEEPADSG 211
+ + + + + ++ L ++ D G
Sbjct: 114 TKKR---GTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLG 170
Query: 212 TPLVWIHDYHLMLA------ANTIRNIADEQNLK 239
+ L + ++ +A +K
Sbjct: 171 LTVSSSGPISLDITPKGVSKGYALQRLAKLLGIK 204
|
Length = 264 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-05
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 28/185 (15%)
Query: 342 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMD 401
+I+L + RL KGL ++AF L E+ P+ L+ IA P D Y+ +++
Sbjct: 204 RIILFLGRLHPKKGLDLLIEAFAKLAERFPD----WHLV-IAGP---DEGGYRAELKQIA 255
Query: 402 QLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD-GMNLVAKEFVAC 460
+G + R T G + ++ A+ DA + V P +V E +AC
Sbjct: 256 AALG-LEDRVT---------FTGMLYGEDKAAALADADL-FVLPSHSENFGIVVAEALAC 304
Query: 461 QINEPPGV-LIVSPFAG-AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518
G ++ + + ++DA A + RAL +P+ + + N
Sbjct: 305 ------GTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRA 358
Query: 519 KREKH 523
E+
Sbjct: 359 LVEER 363
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 6e-05
Identities = 51/249 (20%), Positives = 90/249 (36%), Gaps = 40/249 (16%)
Query: 662 HGGRTVRIRPLPIAIPYERFVQ---LAQAAPRVI----DTKQKIVLGVDRLDYTKGLIES 714
HG R + + A R+I T++++ + I
Sbjct: 116 HGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR---ELGGVPPEKITV 172
Query: 715 IRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL 774
I N + R A I + ++L V RL KG+ L+A L +++P+
Sbjct: 173 IPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD-- 230
Query: 775 EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834
V L+ I D ++L+ +L F G + ++L +
Sbjct: 231 --VRLV-IV----GDGPLREELEALAAELGLGDRVTFL-----------GFVPDEDLPAL 272
Query: 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV-LIVSPFAGAGEQMHE---ALICNPY 890
Y A V ++ L +G LV E +A G+ ++ S G E + + L+ P
Sbjct: 273 YAAADVFVLPSLYEGFGLVLLEAMAA------GLPVVASDVGGIPEVVEDGETGLLVPPG 326
Query: 891 EIDAAAEVI 899
+ +A AE I
Sbjct: 327 DPEALAEAI 335
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 32/196 (16%)
Query: 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG 99
L D DGTL P+ L ET L++L V + +++GR++ + E++
Sbjct: 1 LLFFDLDGTLLD----PNAHELSPETIEALERLRE-AGVKVVLVTGRSLAEIKELLKQLP 55
Query: 100 LTYAGNHGLEIIHPDGSRFVHP------IPTEFEDKVSDLLKTLQEKVMSVHIDPKI-FD 152
L +G I +P ++ P I E+ ++L + V + D I
Sbjct: 56 LPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVA 115
Query: 153 SYYNGCCNGTFWPLFHSMPDRAMFCA--EHWRAYAQVNQEFADKTI-----------KAL 199
+Y G G D M + R ++ + KT AL
Sbjct: 116 IHYVGAELGQEL-------DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSAL 168
Query: 200 QILAQEEPADSGTPLV 215
Q L +E L
Sbjct: 169 QALLKELNGKRDEILA 184
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 4e-04
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 304 LVEHGG-RTVRIRPLPIAIPYERFV----QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVH 358
L G RIR +P + ERF A+ A + D + +L V RLD
Sbjct: 178 LYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLD------- 230
Query: 359 RLKAFETLLE---KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 415
K +TL+ + PE E+ L+ + P + ++ E+ + +G I+
Sbjct: 231 PRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVID------- 283
Query: 416 WSPIRYIY-GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474
R + G +S+++L + YR A V + L + L A E +AC G+ +V+
Sbjct: 284 ----RVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC------GLPVVATA 333
Query: 475 AG----AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523
G L+ +P + +A A + R LT P R L LR+
Sbjct: 334 VGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARAR 386
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 1019 KLGFFLHIPFPPWDIFRLFPWSDEILQGM 1047
++GFFLHIPFP +IF P DE+L+ +
Sbjct: 149 RIGFFLHIPFPTPEIFNALPPHDELLEQL 177
|
Length = 474 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 301 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV--IDTKQKIVLGVDRLDYTKGLVH 358
+ L G ++ +P + ERF +A R + +K++L V RL KG+ +
Sbjct: 160 ADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDY 219
Query: 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418
++A LL+K P+ V L+ I D + L+ +L + R T
Sbjct: 220 LIEALARLLKKRPD----VHLV-IV----GDGPLREALEALAAEL--GLEDRVT------ 262
Query: 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 478
G + +E+ ++Y A V ++ LR+G LV E +AC + P ++ + G
Sbjct: 263 ---FLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL--P---VVATDVGGIP 314
Query: 479 EQMHEA---LICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
E + + L+ P + +A AE I R L D R+R
Sbjct: 315 EIITDGENGLLVPPGDPEALAEAILRLL---ADPWLRLGRAARRR 356
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1460 | |||
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050|consensus | 732 | 100.0 | ||
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| KOG1050|consensus | 732 | 100.0 | ||
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.89 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.88 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.85 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.84 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.84 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.84 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.84 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.84 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.83 | |
| PLN02316 | 1036 | synthase/transferase | 99.83 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.83 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.83 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.83 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.82 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.82 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.82 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.82 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.82 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.81 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.8 | |
| PLN00142 | 815 | sucrose synthase | 99.79 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.79 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.79 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.79 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.79 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.79 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.78 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.78 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.78 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.78 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.77 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.77 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.77 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.76 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.76 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.76 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.76 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.75 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.75 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.75 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.75 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.75 | |
| PLN02316 | 1036 | synthase/transferase | 99.75 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.74 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.74 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.74 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.74 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.74 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.74 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.74 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.74 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.73 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.73 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.73 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.72 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.72 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.72 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.72 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.72 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.72 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.71 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.71 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.71 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.71 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.7 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.7 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.7 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.7 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.7 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.7 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.69 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.68 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.68 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.68 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.68 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.68 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.68 | |
| PLN00142 | 815 | sucrose synthase | 99.68 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.67 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.67 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.67 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.67 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.66 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.66 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.65 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.65 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.65 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.65 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.64 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.64 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.64 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.64 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.63 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.63 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.63 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.63 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.62 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.62 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.61 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.61 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.6 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.6 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.6 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.59 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.59 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.59 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.58 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.58 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.58 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.58 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.58 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.57 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.56 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.56 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.56 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.54 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.53 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.53 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.51 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.5 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.49 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.47 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.47 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.46 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.46 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.44 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.43 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.43 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.43 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.42 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.42 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.41 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.37 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.35 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.35 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.34 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.32 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.31 | |
| KOG1111|consensus | 426 | 99.3 | ||
| PLN03017 | 366 | trehalose-phosphatase | 99.27 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.26 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.25 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.23 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.21 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.2 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.17 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.17 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.16 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.16 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.15 | |
| KOG0853|consensus | 495 | 99.13 | ||
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.12 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.08 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.08 | |
| KOG1111|consensus | 426 | 99.03 | ||
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 98.98 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.96 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 98.91 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.9 | |
| KOG0853|consensus | 495 | 98.89 | ||
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.88 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.87 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 98.87 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.86 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.85 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.82 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 98.82 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.82 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.82 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 98.82 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.8 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.77 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.74 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 98.74 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.68 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.67 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.67 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.66 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.66 | |
| PLN02423 | 245 | phosphomannomutase | 98.62 | |
| KOG1387|consensus | 465 | 98.61 | ||
| PLN02887 | 580 | hydrolase family protein | 98.59 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.56 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 98.53 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.52 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.48 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.46 | |
| KOG1387|consensus | 465 | 98.43 | ||
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.42 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.39 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 98.39 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.38 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.35 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.34 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 98.34 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.31 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.31 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.3 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.28 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.23 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.22 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.19 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.19 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 98.18 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 98.18 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 98.11 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.04 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.03 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 97.98 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.93 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 97.85 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.79 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 97.72 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.64 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.51 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.49 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 97.42 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 97.33 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.29 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.29 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.24 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.22 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.21 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 97.11 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.11 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 97.02 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 96.89 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 96.75 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 96.69 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.57 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 96.56 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.47 | |
| PLN02423 | 245 | phosphomannomutase | 96.46 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.4 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.35 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.32 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 96.31 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.22 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.22 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.2 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 96.18 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.18 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.16 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.12 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.08 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.07 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 95.92 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 95.87 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 95.86 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 95.84 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.78 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 95.77 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.75 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.69 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 95.48 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.42 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 95.41 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.34 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.31 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.3 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 95.15 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.09 | |
| KOG3189|consensus | 252 | 94.86 | ||
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.85 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.84 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 94.74 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.69 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 94.43 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.32 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.26 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.2 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.08 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 94.04 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.93 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 93.91 | |
| PLN02887 | 580 | hydrolase family protein | 93.8 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.78 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.75 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 93.67 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.34 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 93.31 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 93.24 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.04 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.02 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 92.87 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.77 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.59 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 92.53 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 92.15 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 92.06 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 91.74 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 91.7 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.52 | |
| PRK06769 | 173 | hypothetical protein; Validated | 90.51 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 90.43 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 90.28 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 90.14 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 89.83 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 89.7 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 89.27 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 89.13 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 88.69 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 88.27 | |
| KOG3189|consensus | 252 | 87.68 | ||
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 87.55 | |
| KOG2941|consensus | 444 | 87.47 | ||
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 87.46 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 87.31 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 87.23 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.19 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 87.12 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 87.1 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 86.91 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 86.51 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 86.32 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 86.31 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 86.3 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 86.17 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 86.05 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 86.04 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 85.88 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 85.77 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 85.56 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 83.65 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 83.44 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 83.34 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 83.06 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 82.37 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 82.18 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 82.01 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 81.9 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 81.1 | |
| PRK08238 | 479 | hypothetical protein; Validated | 81.06 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 80.89 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 80.68 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 80.01 |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-99 Score=900.17 Aligned_cols=389 Identities=37% Similarity=0.646 Sum_probs=366.6
Q ss_pred ccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEE
Q psy775 138 QEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWI 217 (1460)
Q Consensus 138 q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwI 217 (1460)
.+.+.+|++++++++.||+||||++|||+|||+++...|++++|++|++||++||++|++.++ +||+|||
T Consensus 60 ~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~----------~~D~VWV 129 (474)
T PRK10117 60 NITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLK----------DDDIIWI 129 (474)
T ss_pred CceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEE
Confidence 467899999999999999999999999999999999999999999999999999999999875 6999999
Q ss_pred eCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCce
Q psy775 218 HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR 297 (1460)
Q Consensus 218 HDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~ 297 (1460)
||||||+||++||++. ++++||||||||||++|+|++||+|++|++|||+||+|||||++|++||++||++++|.+
T Consensus 130 HDYhL~llp~~LR~~~----~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~ 205 (474)
T PRK10117 130 HDYHLLPFASELRKRG----VNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVT 205 (474)
T ss_pred eccHhhHHHHHHHHhC----CCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCc
Confidence 9999999999999875 489999999999999999999999999999999999999999999999999999999987
Q ss_pred ecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch-----hhhc--cCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 298 VDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP-----RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 298 ~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~-----~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
...+. .+.++||.++|.++|+|||++.|...+.... .+++ +++++|++|||+||+|||+++|+||++||++|
T Consensus 206 ~~~~~-~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~ 284 (474)
T PRK10117 206 TRSGK-SHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284 (474)
T ss_pred ccCCC-eEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 65433 5678899999999999999999987654221 1222 67999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM 450 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGf 450 (1460)
|+|++||+|+|+++|||+++++|+++++++++++++||++||+.+|.||+|+++.+++++|.|+|++|||+++||++|||
T Consensus 285 Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGM 364 (474)
T PRK10117 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGM 364 (474)
T ss_pred hhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCC
Q psy775 451 NLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQS 530 (1460)
Q Consensus 451 nLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~ 530 (1460)
||||+||+|||.+.++|+||+|||||++++|.+|++|||||++++|+||++||+||.+||+.|++.+++.|.++|
T Consensus 365 NLVAkEyva~q~~~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~d----- 439 (474)
T PRK10117 365 NLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKND----- 439 (474)
T ss_pred ccccchheeeecCCCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCC-----
Confidence 999999999998666899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHhh
Q psy775 531 SLGGNTSAYAQVNQEFADKTIKALQILA 558 (1460)
Q Consensus 531 sl~~~~~~Y~~VNq~fAd~~le~l~~~~ 558 (1460)
+.+ |++.++..++...
T Consensus 440 -----------v~~-W~~~fL~~L~~~~ 455 (474)
T PRK10117 440 -----------INH-WQECFISDLKQIV 455 (474)
T ss_pred -----------HHH-HHHHHHHHHHHhh
Confidence 766 9999999887653
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-96 Score=885.47 Aligned_cols=387 Identities=35% Similarity=0.686 Sum_probs=364.4
Q ss_pred hccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEE
Q psy775 137 LQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVW 216 (1460)
Q Consensus 137 ~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVw 216 (1460)
.+++|.||++++++++.||+||||++|||+|||+++.+.|++++|++|++||++||++|++.++ +||+||
T Consensus 68 ~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~----------~~d~vW 137 (487)
T TIGR02398 68 YKLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAA----------EGATVW 137 (487)
T ss_pred CceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcC----------CCCEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999874 699999
Q ss_pred EeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc
Q psy775 217 IHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC 296 (1460)
Q Consensus 217 IHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~ 296 (1460)
||||||||||++||++.| +++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|.
T Consensus 138 VhDYhL~llp~~LR~~~~----~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~ 213 (487)
T TIGR02398 138 VHDYNLWLVPGYIRQLRP----DLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPL 213 (487)
T ss_pred EecchhhHHHHHHHHhCC----CCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCC
Confidence 999999999999998755 8999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCC-------------------CcEEEECCeEEEEEEeecccCchhhhhhhccc------hhhhc--cCCeEEEEecC
Q psy775 297 RVDRK-------------------NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA------PRVID--TKQKIVLGVDR 349 (1460)
Q Consensus 297 ~~~~~-------------------~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~------~~~~~--~~~kvIL~VgR 349 (1460)
+...+ ...+.++||.++|.++|+|||++.|.+..... ..+++ +++++|++|||
T Consensus 214 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDR 293 (487)
T TIGR02398 214 QTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAER 293 (487)
T ss_pred ccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecc
Confidence 66432 12478999999999999999999998765432 12222 68999999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHH
Q psy775 350 LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQD 429 (1460)
Q Consensus 350 Ld~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~e 429 (1460)
+|++|||+++|+||++||++||++++|++|+|++.|+++++++|+++++++++++++||++||+.+|.||+++++.++++
T Consensus 294 LDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~ 373 (487)
T TIGR02398 294 VDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYE 373 (487)
T ss_pred cccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHH
Q psy775 430 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 430 eL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~e 509 (1460)
++.+||++||||++||+||||||||+||||||.+. +||||+|||+|+++++.+|++|||||++++|+||++||+||.+|
T Consensus 374 el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~-~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~E 452 (487)
T TIGR02398 374 EVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLL-DGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAE 452 (487)
T ss_pred HHHHHHHhCCEEEECccccccCcchhhHHhhhcCC-CCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999865 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHH
Q psy775 510 RTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQ 555 (1460)
Q Consensus 510 r~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~ 555 (1460)
|+.|++.++++|.++| +++ |++.++..++
T Consensus 453 r~~R~~~l~~~v~~~d----------------~~~-W~~~fl~~l~ 481 (487)
T TIGR02398 453 QQARMREMFDAVNYYD----------------VQR-WADEFLAAVS 481 (487)
T ss_pred HHHHHHHHHHHHhhCC----------------HHH-HHHHHHHHhh
Confidence 9999999999999999 777 9999998764
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-94 Score=922.20 Aligned_cols=458 Identities=32% Similarity=0.554 Sum_probs=397.9
Q ss_pred hhccCceeeecCcccccccccccccccccccccCCCCc-----cccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q psy775 136 TLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDR-----AMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADS 210 (1460)
Q Consensus 136 L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~-----~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~ 210 (1460)
+.+++|.|||+++++++.||+||||++|||+|||+++. .+|++.+|++|++||++||++|++.+++
T Consensus 130 ~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~--------- 200 (854)
T PLN02205 130 LETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINP--------- 200 (854)
T ss_pred hcCceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 45799999999999999999999999999999998643 3799999999999999999999998851
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
++|+|||||||||+||+|||++.| +++||||||||||++|+||+||||++||+|||+||+|||||++|+|||++||
T Consensus 201 ~~d~VWVhDYhL~llP~~LR~~~~----~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~ 276 (854)
T PLN02205 201 EDDFVWIHDYHLMVLPTFLRKRFN----RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCC 276 (854)
T ss_pred CCCEEEEeCchhhHHHHHHHhhCC----CCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHH
Confidence 269999999999999999999765 8999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCceecCC--CcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc----cCCeEEEEecCccccCCHHH
Q psy775 291 QRRLGCRVDRK--NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID----TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 291 ~riLg~~~~~~--~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~----~~~kvIL~VgRLd~~KGI~~ 358 (1460)
+|++|+++... ...++|+||.++|.++|+|||++.|....+.+. ++++ .|+++|++|||+|++|||.+
T Consensus 277 ~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~ 356 (854)
T PLN02205 277 SRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISL 356 (854)
T ss_pred HHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHH
Confidence 99999987653 356889999999999999999999977654321 2222 26899999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+|+||++||++||+|++|++|+|++.|+|+++++|+++++++++++++||++||+.+|.||+|+++.++.+|+.|||++|
T Consensus 357 kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A 436 (854)
T PLN02205 357 KLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA 436 (854)
T ss_pred HHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCC--------------CCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcC
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINE--------------PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~--------------~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~ 504 (1460)
||+++||+|||||||++||+|||++. ++|+||+|||+||+++|.+|++|||||++++|+||++||+
T Consensus 437 Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~ 516 (854)
T PLN02205 437 ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALE 516 (854)
T ss_pred cEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHc
Confidence 99999999999999999999999752 4799999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCC------CCCCc-eeeccccc
Q psy775 505 MPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPAD------SGTPL-VWIHDYHL 577 (1460)
Q Consensus 505 m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~------~~~di-IwIhDYhL 577 (1460)
||.+||+.|+++++++|.+++ +.+ |++.++..++....+..+. .+..+ +.-+|-++
T Consensus 517 m~~~Er~~R~~~~~~~v~~~d----------------~~~-W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 579 (854)
T PLN02205 517 MAEPEKQLRHEKHYRYVSTHD----------------VGY-WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNF 579 (854)
T ss_pred CCHHHHHHHHHHHHHHHhhCC----------------HHH-HHHHHHHHHHHHHHHHhhhhhcccccccccccccccccc
Confidence 999999999999999999999 777 9999999987753321000 00000 11133222
Q ss_pred c--ccHHHHHHHHhhcCcCceEEEEeeCC---CCCcc-ccccCccHHHHHhhcccC
Q psy775 578 M--LAANTIRNIADEQNLKFKLGFFLHIP---FPPWD-IFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 578 ~--LlP~~Lr~~~~~~~~~~kigfFLHiP---fP~~e-~fr~lP~r~eIL~~LL~a 627 (1460)
- -....+. ++....++.+|||+- .|... ...+.|...++|+.|+..
T Consensus 580 ~~l~~~~i~~----~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d 631 (854)
T PLN02205 580 RKLSMEHIVS----AYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD 631 (854)
T ss_pred cccCHHHHHH----HHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc
Confidence 1 1122232 566778899999994 22221 345667888999998653
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-94 Score=908.92 Aligned_cols=450 Identities=37% Similarity=0.609 Sum_probs=397.9
Q ss_pred HHhhccCceeeecCcccccccccccccccccccccCCC-------CccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy775 134 LKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMP-------DRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEE 206 (1460)
Q Consensus 134 ~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~-------d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~ 206 (1460)
..+.+++|.||++++++++.||+||||++|||+|||++ +...|++.+|++|++||++||++|++.++
T Consensus 157 ~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~------ 230 (934)
T PLN03064 157 KALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYE------ 230 (934)
T ss_pred HHhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 44568999999999999999999999999999999973 34568889999999999999999999885
Q ss_pred CCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHH
Q psy775 207 PADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 207 ~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
+||+||||||||||||+|||++.| +++||||||||||++|+||+||+|++||+|||+||+|||||++|++||
T Consensus 231 ----~gD~VWVHDYHL~LlP~~LR~~~p----~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhF 302 (934)
T PLN03064 231 ----EGDVVWCHDYHLMFLPKCLKEYNS----NMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHF 302 (934)
T ss_pred ----CCCEEEEecchhhHHHHHHHHhCC----CCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHH
Confidence 699999999999999999999765 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~ 358 (1460)
++||.|++|.+.... .+.++||.++|.++|+|||++.|........ .++. .++++|++|||||++|||++
T Consensus 303 l~~c~rlLg~~~~~~--~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~ 380 (934)
T PLN03064 303 VSACTRILGLEGTPE--GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQ 380 (934)
T ss_pred HHHHHHHhCccccCC--eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHH
Confidence 999999999886654 3789999999999999999999987654321 2222 68999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+|+||++||++||+|+++|+|+||++|+|+++++|++|++++.++|++||++||+.+|.||+|++..+++++|.+||++|
T Consensus 381 kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A 460 (934)
T PLN03064 381 KILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT 460 (934)
T ss_pred HHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
||||+||++||||||++||||||... +|+||+|||+|++++|+ +|++|||||++++|+||++||+|+++||+.|++.+
T Consensus 461 DV~lvTslrDGmNLva~Eyva~~~~~-~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~ 539 (934)
T PLN03064 461 DVALVTSLRDGMNLVSYEFVACQDSK-KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHN 539 (934)
T ss_pred CEEEeCccccccCchHHHHHHhhcCC-CCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999865 89999999999999994 79999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceE
Q psy775 518 RKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597 (1460)
Q Consensus 518 ~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~ki 597 (1460)
++++..++ +.+ |++.|+..++....++.. ....+. ..+-....+. ++..+.++
T Consensus 540 ~~~V~~~d----------------~~~-Wa~~fl~~L~~~~~~~~~-~~~~~~-----~~l~~~~~~~----~y~~a~~R 592 (934)
T PLN03064 540 FMHVTTHT----------------AQE-WAETFVSELNDTVVEAQL-RTRQVP-----PQLPPEDAIQ----RYLQSNNR 592 (934)
T ss_pred HhhcccCC----------------HHH-HHHHHHHHHHHHHhhhhc-cccccC-----CCCCHHHHHH----HHHhccce
Confidence 99999999 666 999999988775432210 000100 0111222232 55667789
Q ss_pred EEEeeC-----CC-CCcc---------ccccCccHHHHHhhcccC
Q psy775 598 GFFLHI-----PF-PPWD---------IFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 598 gfFLHi-----Pf-P~~e---------~fr~lP~r~eIL~~LL~a 627 (1460)
.||||| |+ +.|+ ..++.|...++|+.|...
T Consensus 593 LlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 593 LLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred EEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 999999 53 4454 556778889999998764
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=873.85 Aligned_cols=414 Identities=48% Similarity=0.859 Sum_probs=324.4
Q ss_pred cceeEccCCcccccCCCCccccCCCccchhhhhhHHHhhccCceeeecCcccccccccccccccccccccCCCC----cc
Q psy775 99 GLTYAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPD----RA 174 (1460)
Q Consensus 99 ~~~~ig~hGaei~~~g~~i~~~pI~ee~vdeL~ii~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d----~~ 174 (1460)
+..|+|+.|........ ..+.+. .....+++|+||++++++++.||+||||++|||+|||.++ ..
T Consensus 46 ~~~WvGw~g~~~~~~~~-------~~~~v~----~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~~ 114 (474)
T PF00982_consen 46 GGIWVGWPGVDVDEEED-------EQDRVE----PRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDLA 114 (474)
T ss_dssp -EEEEEEEEEES-TTS----------EEEE-------ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-
T ss_pred CCEEEEeCCCcCccccc-------cccchh----hhcccCceEEEEEcCHHHHHHHHHhhhhhccCcccccccccccccc
Confidence 34577877776554431 011001 2234678899999999999999999999999999998655 78
Q ss_pred ccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc
Q psy775 175 MFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD 254 (1460)
Q Consensus 175 ~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e 254 (1460)
.|+.++|++|++||++||++|++.++ +||+||||||||||||++||++.| +++||||||||||++|
T Consensus 115 ~~~~~~w~~Y~~vN~~FA~~i~~~~~----------~~D~VWVhDYhL~llP~~LR~~~~----~~~IgfFlHiPFPs~e 180 (474)
T PF00982_consen 115 RFEEEWWEAYKRVNRRFADAIAEVYR----------PGDLVWVHDYHLMLLPQMLRERGP----DARIGFFLHIPFPSSE 180 (474)
T ss_dssp ---HHHHHHHHHHHHHHHHHHGGG------------TT-EEEEESGGGTTHHHHHHHTT------SEEEEEE-S----HH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCc----------CCCEEEEeCCcHHHHHHHHHhhcC----CceEeeEEecCCCCHH
Confidence 89999999999999999999999886 699999999999999999999766 8999999999999999
Q ss_pred ccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch
Q psy775 255 IFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP 334 (1460)
Q Consensus 255 ifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~ 334 (1460)
+|++||+|++||+|||+||+|||||++|++||++||++++|+++......++++||.++|.++|+|||++.|.+.+.+..
T Consensus 181 ~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~ 260 (474)
T PF00982_consen 181 IFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPE 260 (474)
T ss_dssp HHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-
T ss_pred HHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChH
Confidence 99999999999999999999999999999999999999999988766546899999999999999999999987654321
Q ss_pred ------hhhc--cC-CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy775 335 ------RVID--TK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 405 (1460)
Q Consensus 335 ------~~~~--~~-~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~ 405 (1460)
.+++ ++ +++|++|||+|++|||+++|+||++||++||+++++|+|+|++.|+++++++|++++++++++|+
T Consensus 261 v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 261 VQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVG 340 (474)
T ss_dssp --HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHH
Confidence 2222 56 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-cc
Q psy775 406 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EA 484 (1460)
Q Consensus 406 ~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~a 484 (1460)
+||++||+.+|.||+|+++.++.+++.+||++|||+++||++|||||||+||+|||.+. +|+||+|||+|++++|. +|
T Consensus 341 ~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~-~GvLiLSefaGaa~~L~~~a 419 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDN-PGVLILSEFAGAAEQLSEAA 419 (474)
T ss_dssp HHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS---EEEEETTBGGGGT-TTS-
T ss_pred HHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCC-CCceEeeccCCHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999885 89999999999999998 46
Q ss_pred EEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHH
Q psy775 485 LICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQ 555 (1460)
Q Consensus 485 llVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~ 555 (1460)
++|||||++++|+||++||+||++||+.|++.++++|..++ +++ |++.+++.++
T Consensus 420 l~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~----------------~~~-W~~~~l~~L~ 473 (474)
T PF00982_consen 420 LLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHD----------------VQW-WAESFLRDLK 473 (474)
T ss_dssp EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-----------------HHH-HHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCC----------------HHH-HHHHHHHHhh
Confidence 99999999999999999999999999999999999999999 766 9999998875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-92 Score=838.71 Aligned_cols=384 Identities=45% Similarity=0.814 Sum_probs=360.0
Q ss_pred ccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEE
Q psy775 138 QEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWI 217 (1460)
Q Consensus 138 q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwI 217 (1460)
.+...+|.++.+++..||++|||++|||+|||+++...|++.+|++|++||++||++|++.|+ +||+|||
T Consensus 84 ~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~~----------~gDiIWV 153 (486)
T COG0380 84 EFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIYE----------PGDIIWV 153 (486)
T ss_pred cceEEEEecCHHHHHHHHHHhhHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEE
Confidence 677899999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred eCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCce
Q psy775 218 HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR 297 (1460)
Q Consensus 218 HDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~ 297 (1460)
|||||+|||+|||++.| +++||||||||||++|+|+|||+|++|++|||+||+||||+++|++||+++|+++++.+
T Consensus 154 hDYhL~L~P~mlR~~~~----~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~ 229 (486)
T COG0380 154 HDYHLLLVPQMLRERIP----DAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT 229 (486)
T ss_pred EechhhhhHHHHHHhCC----CceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc
Confidence 99999999999999766 89999999999999999999999999999999999999999999999999999999865
Q ss_pred ecCCCcEEE---ECCeEEEEEEeecccCchhhhhhhccc------hhhhc---cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 298 VDRKNLLVE---HGGRTVRIRPLPIAIPYERFVQLAQAA------PRVID---TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 298 ~~~~~~~i~---~~Gr~vkV~viPiGID~~~f~~~~~~~------~~~~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
... .+. ++|+.+++.++|+|||++.|....... .++++ .++++|++|||+||+||++++++||++
T Consensus 230 ~~~---~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~ 306 (486)
T COG0380 230 GDA---DIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFER 306 (486)
T ss_pred ccc---cccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHH
Confidence 221 123 447999999999999999998765332 22222 449999999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
||++||+|++||+|+|++.||+++.++|++++.+++++|++||++||+.+|+||+|++..++.+++.+||++||++++||
T Consensus 307 lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtp 386 (486)
T COG0380 307 LLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTP 386 (486)
T ss_pred HHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
++||||||++||+|||.. ++|+||+|||+|++.+|.+|++|||||.+++|+||++||+|+++||+.|++++.+.+.++|
T Consensus 387 lrDGMNLvakEyVa~q~~-~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d 465 (486)
T COG0380 387 LRDGMNLVAKEYVAAQRD-KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465 (486)
T ss_pred ccccccHHHHHHHHhhcC-CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999994 4999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchhhhhhhHHHHHHHHHHHHH
Q psy775 526 CPGQSSLGGNTSAYAQVNQEFADKTIKALQI 556 (1460)
Q Consensus 526 ~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~ 556 (1460)
+++ |+++++..+..
T Consensus 466 ----------------~~~-W~~~fl~~la~ 479 (486)
T COG0380 466 ----------------VAR-WANSFLDDLAQ 479 (486)
T ss_pred ----------------HHH-HHHHHHHHHHh
Confidence 777 99999988754
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-91 Score=887.78 Aligned_cols=488 Identities=30% Similarity=0.510 Sum_probs=413.8
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|+++|++||+++++.++ ++ .|+||||||||+++|.+|| +.+++.+||||||+|||++|+|++
T Consensus 178 ~~w~~Y~~vN~~FA~~v~~~~~---~~------~d~VWVhDYhL~llP~~LR----~~~~~~~IgfFlHiPFPs~eifr~ 244 (854)
T PLN02205 178 SLWQAYVSVNKIFADRIMEVIN---PE------DDFVWIHDYHLMVLPTFLR----KRFNRVKLGFFLHSPFPSSEIYKT 244 (854)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC---CC------CCEEEEeCchhhHHHHHHH----hhCCCCcEEEEecCCCCChHHHhh
Confidence 3699999999999999998753 22 2799999999999999999 667899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCC--CcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK--NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV 691 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~--~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~ 691 (1460)
+|+|++||+|||+||+|||||++|+|||++||+|+||+++..+ ...++|+||+|+|+++|+|||++.|...+.. +++
T Consensus 245 LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-~~~ 323 (854)
T PLN02205 245 LPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-PET 323 (854)
T ss_pred CCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC-hhH
Confidence 9999999999999999999999999999999999999988653 3578999999999999999999999887663 222
Q ss_pred cccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCC
Q psy775 692 IDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 771 (1460)
Q Consensus 692 ~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P 771 (1460)
. ++++++|++++ ..++++|+||||+|++|||.+||+||++||++||
T Consensus 324 ~-----------------~~~~~l~~~~~-----------------~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P 369 (854)
T PLN02205 324 E-----------------AKVKELIKQFC-----------------DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHP 369 (854)
T ss_pred H-----------------HHHHHHHHHhc-----------------cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCc
Confidence 2 12344554321 1378999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCC
Q psy775 772 EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMN 851 (1460)
Q Consensus 772 ~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmn 851 (1460)
+|+|||+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||
T Consensus 370 ~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMN 449 (854)
T PLN02205 370 EWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMN 449 (854)
T ss_pred cccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEecccc
Q psy775 852 LVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFA 931 (1460)
Q Consensus 852 Lva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~ 931 (1460)
|||+||+|||++.+. +....|.. ..+.++||||+|||+
T Consensus 450 Lva~Eyia~~~~~~~----~~~~~~~~--------------------------------------~~~~~~gvLiLSEfa 487 (854)
T PLN02205 450 LIPYEYIISRQGNEK----LDKLLGLE--------------------------------------PSTPKKSMLVVSEFI 487 (854)
T ss_pred ccchheeEEccCccc----cccccccc--------------------------------------cccCCCCceEeeecc
Confidence 999999999975410 00001100 123578999999999
Q ss_pred CCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC----------
Q psy775 932 GAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG---------- 1001 (1460)
Q Consensus 932 G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~---------- 1001 (1460)
|||.+|++|++|||||++++|+||++||+||.+||+.|+++++++|++||+.+|+++||.+|.+...+..
T Consensus 488 Gaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g 567 (854)
T PLN02205 488 GCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFG 567 (854)
T ss_pred chhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred ------------CCCCcccchHHhHhhhhcceeeeec-------c---CCCccccccccChHHHHHHhhhc---------
Q psy775 1002 ------------DDVLPTTLIADEQNLKFKLGFFLHI-------P---FPPWDIFRLFPWSDEILQGMLGK--------- 1050 (1460)
Q Consensus 1002 ------------~~~~~~~~~~~~~~~k~~~~f~~~i-------~---e~~~~~~~~~~~~~~il~~l~~~--------- 1050 (1460)
..+....+...|+.+++|+ |++++ . ..|++ +++ ++|++||++
T Consensus 568 ~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rl-I~LDyDGTLlp~~~~~~~p~~--~~~----~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 568 LSFRVVALDPNFRKLSMEHIVSAYKRTTTRA-ILLDYDGTLMPQASIDKSPSS--KSI----DILNTLCRDKNNMVFIVS 640 (854)
T ss_pred cccccccccccccccCHHHHHHHHHhhcCeE-EEEecCCcccCCccccCCCCH--HHH----HHHHHHHhcCCCEEEEEe
Confidence 0112355678899999995 77764 1 13334 466 899999754
Q ss_pred -ccchhhhhhhccccccccccCceeccceeeecCC--CCccccc--cCCChHHHhh----------c---ccccceeeee
Q psy775 1051 -ASLGLLSWLCNTIKNIADEQNLKFKLGFFLHIPF--PPWDIFR--LFPWSDEILQ----------G---MLGCDMVGFH 1112 (1460)
Q Consensus 1051 -~~~~~~~~l~~~~~n~~~~~~l~ae~g~~~r~~~--~~~~~~~--~~~~~~~~~~----------~---~~~~~~~~~~ 1112 (1460)
+++..++.++..+.|+ +++||||+|+|.+| .|-.... +..|++.+.. | ......+.+|
T Consensus 641 GR~~~~L~~~f~~~~~l----~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~H 716 (854)
T PLN02205 641 ARSRKTLADWFSPCEKL----GIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWC 716 (854)
T ss_pred CCCHHHHHHHhCCCCCe----EEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEe
Confidence 6789999999998888 99999999999887 4644444 5679964431 3 2346778999
Q ss_pred cccccccccc
Q psy775 1113 IEDYCLNFVD 1122 (1460)
Q Consensus 1113 ~~~~~~~~~~ 1122 (1460)
..++++.|..
T Consensus 717 yR~adpd~~~ 726 (854)
T PLN02205 717 YEDADPDFGS 726 (854)
T ss_pred hhhCChHHhh
Confidence 9998776643
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-88 Score=860.58 Aligned_cols=475 Identities=35% Similarity=0.558 Sum_probs=405.7
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|++||++||+++.+.++ ++|+||||||||+++|.+|| +..++.+||||||+|||++|+|+
T Consensus 208 ~~~w~~Y~~vN~~FA~~i~~~~~----------~gD~VWVHDYHL~LlP~~LR----~~~p~~~IGfFlHiPFPs~Eifr 273 (934)
T PLN03064 208 QSQFAAYKKANQMFADVVNEHYE----------EGDVVWCHDYHLMFLPKCLK----EYNSNMKVGWFLHTPFPSSEIHR 273 (934)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEecchhhHHHHHHH----HhCCCCcEEEEecCCCCChHHHh
Confidence 35799999999999999998753 23799999999999999999 66789999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|+|++||+|||+||+|||||++|++||++||+|++|++.... .+.++||.++|.++|+|||++.|...+.. +++.
T Consensus 274 ~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~--~v~~~Gr~v~V~~~PiGID~~~f~~~~~~-~~v~ 350 (934)
T PLN03064 274 TLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE--GVEDQGRLTRVAAFPIGIDSDRFIRALET-PQVQ 350 (934)
T ss_pred hCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC--eEEECCEEEEEEEEeCEEcHHHHHHHhcC-hhHH
Confidence 99999999999999999999999999999999999999886654 48999999999999999999999987663 3332
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
++++++|+. +.++++|+||||||++|||++||+||++||++||+
T Consensus 351 -----------------~~~~~lr~~-------------------~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe 394 (934)
T PLN03064 351 -----------------QHIKELKER-------------------FAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPE 394 (934)
T ss_pred -----------------HHHHHHHHH-------------------hCCceEEEEeeccccccCHHHHHHHHHHHHHhCcc
Confidence 233455543 26789999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
|++||+||||++|+|+++++|+++++++.++|++||++||+.+|.||+|+++.++++||+|||++|||||+||+||||||
T Consensus 395 ~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNL 474 (934)
T PLN03064 395 WRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNL 474 (934)
T ss_pred ccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
|++||||||..+ +|+||+|||+|+++
T Consensus 475 va~Eyva~~~~~-~GvLILSEfaGaa~----------------------------------------------------- 500 (934)
T PLN03064 475 VSYEFVACQDSK-KGVLILSEFAGAAQ----------------------------------------------------- 500 (934)
T ss_pred hHHHHHHhhcCC-CCCeEEeCCCchHH-----------------------------------------------------
Confidence 999999999865 79999999999887
Q ss_pred Ccccc-cceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC---CC----C
Q psy775 933 AGEQM-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG---DD----V 1004 (1460)
Q Consensus 933 ~~~~l-~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~---~~----~ 1004 (1460)
+| .+|++|||||++++|++|++||+|+++||+.|+++++++|.+||+.+|++.|+.+|.....+.. .. +
T Consensus 501 ---~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~~~~l 577 (934)
T PLN03064 501 ---SLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQL 577 (934)
T ss_pred ---HhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhccccccCCCC
Confidence 33 4789999999999999999999999999999999999999999999999999999998864322 11 2
Q ss_pred CcccchHHhHhhhhcceeeeec-------cCCCcc----cc--ccccCh--HHHHHHhhhc----------ccchhhhhh
Q psy775 1005 LPTTLIADEQNLKFKLGFFLHI-------PFPPWD----IF--RLFPWS--DEILQGMLGK----------ASLGLLSWL 1059 (1460)
Q Consensus 1005 ~~~~~~~~~~~~k~~~~f~~~i-------~e~~~~----~~--~~~~~~--~~il~~l~~~----------~~~~~~~~l 1059 (1460)
....++..|.++++++ ||+++ ..-|.. +. ...|+. -++|+.||+. +++..|+.+
T Consensus 578 ~~~~~~~~y~~a~~RL-lfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~ 656 (934)
T PLN03064 578 PPEDAIQRYLQSNNRL-LILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDEN 656 (934)
T ss_pred CHHHHHHHHHhccceE-EEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHH
Confidence 2366778899999995 77765 111110 00 011222 1678899875 567888888
Q ss_pred hccccccccccCceeccceeeecCC-CCc-cccc--cCCChHHHhh----------c---ccccceeeeecccccccccc
Q psy775 1060 CNTIKNIADEQNLKFKLGFFLHIPF-PPW-DIFR--LFPWSDEILQ----------G---MLGCDMVGFHIEDYCLNFVD 1122 (1460)
Q Consensus 1060 ~~~~~n~~~~~~l~ae~g~~~r~~~-~~~-~~~~--~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~ 1122 (1460)
+..+ |+ ||+||||+|+|.++ .|. +... +.+|++.+.. | .....-+.||..++...|..
T Consensus 657 fg~~-~L----~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~ 731 (934)
T PLN03064 657 FGEF-DM----WLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGR 731 (934)
T ss_pred hCCC-Cc----eEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHH
Confidence 8887 88 99999999999866 665 3444 4589976643 4 34567788999999655544
Q ss_pred c
Q psy775 1123 C 1123 (1460)
Q Consensus 1123 ~ 1123 (1460)
+
T Consensus 732 ~ 732 (934)
T PLN03064 732 L 732 (934)
T ss_pred H
Confidence 4
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-87 Score=856.11 Aligned_cols=449 Identities=35% Similarity=0.602 Sum_probs=395.3
Q ss_pred HHhhccCceeeecCcccccccccccccccccccccCCC-------CccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy775 134 LKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMP-------DRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEE 206 (1460)
Q Consensus 134 ~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~-------d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~ 206 (1460)
..+.+++|.||++ +++++.||+||||++|||+|||+. +...|.+++|++|++||++||++|++.++
T Consensus 74 ~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~------ 146 (797)
T PLN03063 74 ESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYE------ 146 (797)
T ss_pred HHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 3356899999999 899999999999999999999982 23456678999999999999999999885
Q ss_pred CCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHH
Q psy775 207 PADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 207 ~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
+||+||||||||||||+|||++.| +++||||||||||++|+||+||+|++|++|||+||+|||||++|++||
T Consensus 147 ----~~d~vWvhDYhL~llp~~lR~~~~----~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~F 218 (797)
T PLN03063 147 ----EGDVVWCHDYHLMFLPQYLKEYNN----KMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHF 218 (797)
T ss_pred ----CCCEEEEecchhhhHHHHHHHhCC----CCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHH
Confidence 699999999999999999999765 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc------hhhhc--cCCeEEEEecCccccCCHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA------PRVID--TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~------~~~~~--~~~kvIL~VgRLd~~KGI~~ 358 (1460)
+++|++++|.+..... +.++|+.++|.++|+|||++.|.+..... ..+++ +++++|++|||+++.||+..
T Consensus 219 l~~~~r~l~~~~~~~~--i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~ 296 (797)
T PLN03063 219 LSACTRILGVEGTHEG--VVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQ 296 (797)
T ss_pred HHHHHHHhCccccCCc--eEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHH
Confidence 9999999998765543 77999999999999999999997654321 12222 67899999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+|+||++|++++|+++++++|+|++.|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|
T Consensus 297 lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~A 376 (797)
T PLN03063 297 KYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAIT 376 (797)
T ss_pred HHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
||||+||++||||||++||||||++. +|++|+||++|++++++ +|++|||||++++|+||.++|+|+++||+.|++.+
T Consensus 377 DvfvvtSlrEGmnLv~lEamA~g~p~-~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~ 455 (797)
T PLN03063 377 DVMLVTSLRDGMNLVSYEFVACQKAK-KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHN 455 (797)
T ss_pred CEEEeCccccccCcchhhHheeecCC-CCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999986 89999999999999995 79999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceE
Q psy775 518 RKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597 (1460)
Q Consensus 518 ~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~ki 597 (1460)
++++.+++ +.+ |++.+++.++.+...+..... +.....-....+. ++..+.++
T Consensus 456 ~~~v~~~~----------------~~~-Wa~~fl~~l~~~~~~~~~~~~------~~~~~l~~~~~~~----~y~~a~~r 508 (797)
T PLN03063 456 FQYVKTHS----------------AQK-WADDFMSELNDIIVEAELRTR------NIPLELPEQDVIQ----QYSKSNNR 508 (797)
T ss_pred HHhhhhCC----------------HHH-HHHHHHHHHHHHhhhhhhccc------CCCCCCCHHHHHH----HHHhccCe
Confidence 99999999 666 999999998876543211000 1111222233333 55667789
Q ss_pred EEEeeC-----CC-C---CccccccCccHHHHHhhcccC
Q psy775 598 GFFLHI-----PF-P---PWDIFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 598 gfFLHi-----Pf-P---~~e~fr~lP~r~eIL~~LL~a 627 (1460)
.||||| |+ | .|+...+.|...++|+.|...
T Consensus 509 ll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d 547 (797)
T PLN03063 509 LLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD 547 (797)
T ss_pred EEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC
Confidence 999999 43 2 346677888999999998764
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=805.86 Aligned_cols=385 Identities=47% Similarity=0.829 Sum_probs=362.4
Q ss_pred hhccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEE
Q psy775 136 TLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLV 215 (1460)
Q Consensus 136 L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvV 215 (1460)
..+++|.||++++++++.||+||||++|||+|||+++...|++++|++|++||++||++|++.++ +||+|
T Consensus 62 ~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~----------~~d~v 131 (456)
T TIGR02400 62 EGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQ----------PGDIV 131 (456)
T ss_pred ccCceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCC----------CCCEE
Confidence 34678999999999999999999999999999999999999999999999999999999999875 69999
Q ss_pred EEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcC
Q psy775 216 WIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG 295 (1460)
Q Consensus 216 wIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg 295 (1460)
||||||||+||+|||++.| +++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|++++|
T Consensus 132 wvhDYhl~l~p~~lr~~~~----~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~ 207 (456)
T TIGR02400 132 WVHDYHLMLLPAMLRELGV----QNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELG 207 (456)
T ss_pred EEecchhhHHHHHHHhhCC----CCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhC
Confidence 9999999999999998765 899999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 296 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 296 ~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
.+..... +.++|+.++|.++|+|||++.|.+...... .+++ .++++|++|||+++.||++.+|+||++|+
T Consensus 208 ~~~~~~~--~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll 285 (456)
T TIGR02400 208 LETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFL 285 (456)
T ss_pred CcccCCc--eEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHH
Confidence 8877654 678899999999999999999986543321 1222 67899999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|+++++++|+|++.|+++++++|+++++++++++++||++||+.+|.|++++.+.++.+++.++|++|||||+||++
T Consensus 286 ~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~ 365 (456)
T TIGR02400 286 EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLR 365 (456)
T ss_pred HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCC
Q psy775 448 DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCP 527 (1460)
Q Consensus 448 EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~ 527 (1460)
||||||++|||||+.|. +|+||+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|++.+++++.+++
T Consensus 366 EG~~Lv~lEamA~g~P~-~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~-- 442 (456)
T TIGR02400 366 DGMNLVAKEYVAAQDPK-DGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKND-- 442 (456)
T ss_pred cccCccHHHHHHhcCCC-CceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCC--
Confidence 99999999999999997 699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHHHH
Q psy775 528 GQSSLGGNTSAYAQVNQEFADKTIKAL 554 (1460)
Q Consensus 528 ~~~sl~~~~~~Y~~VNq~fAd~~le~l 554 (1460)
+++ |+++++..+
T Consensus 443 --------------~~~-W~~~~l~~l 454 (456)
T TIGR02400 443 --------------VQR-WREDFLSDL 454 (456)
T ss_pred --------------HHH-HHHHHHHHh
Confidence 666 999998765
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=794.51 Aligned_cols=357 Identities=37% Similarity=0.652 Sum_probs=328.8
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|++||++||+++.+.++ ++|+||||||||+++|++|| +.+++.+||||||+|||++|+|+
T Consensus 100 ~~~w~~Y~~VN~~FA~~v~~~~~----------~~D~VWVHDYhL~llp~~LR----~~~~~~~IgFFlHiPFPs~eifr 165 (474)
T PRK10117 100 RPAWEGYLRVNALLADKLLPLLK----------DDDIIWIHDYHLLPFASELR----KRGVNNRIGFFLHIPFPTPEIFN 165 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEeccHhhHHHHHHH----HhCCCCcEEEEEeCCCCChHHHh
Confidence 35799999999999999998653 23799999999999999999 67899999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++||+|||+||+|||||++|++||++||++++|++...+ ..+.++||.++|.++|+|||++.|.+.+.+ + +.
T Consensus 166 ~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~-~~v~~~gr~v~v~~~PigID~~~~~~~a~~-~-~~ 242 (474)
T PRK10117 166 ALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG-KSHTAWGKAFRTEVYPIGIEPDEIAKQAAG-P-LP 242 (474)
T ss_pred hCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC-CeEEECCeEEEEEEEECeEcHHHHHHHhhc-h-HH
Confidence 99999999999999999999999999999999999999887554 367889999999999999999999887653 2 11
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
.+.+++|+. .+++++|+|||||||+|||++||+||++||++||+
T Consensus 243 -----------------~~~~~lr~~-------------------~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe 286 (474)
T PRK10117 243 -----------------PKLAQLKAE-------------------LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQ 286 (474)
T ss_pred -----------------HHHHHHHHH-------------------cCCCeEEEEecccccccCHHHHHHHHHHHHHhChh
Confidence 123444443 25799999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
|+|||+|+||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++++.|||++|||++|||+||||||
T Consensus 287 ~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNL 366 (474)
T PRK10117 287 HHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNL 366 (474)
T ss_pred hcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
||+||+|||++.++|+||+|||+|+++
T Consensus 367 VAkEyva~q~~~~~GvLILSefAGaA~----------------------------------------------------- 393 (474)
T PRK10117 367 VAKEYVAAQDPANPGVLVLSQFAGAAN----------------------------------------------------- 393 (474)
T ss_pred ccchheeeecCCCCccEEEecccchHH-----------------------------------------------------
Confidence 999999999866689999999999888
Q ss_pred CcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 933 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 933 ~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
+|++|++|||||++++|+||++||+||.+||+.|++.|+++|.+||+.+|+++||++|.....
T Consensus 394 ---~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 394 ---ELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred ---HhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 556899999999999999999999999999999999999999999999999999999987753
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-83 Score=816.45 Aligned_cols=459 Identities=41% Similarity=0.721 Sum_probs=401.1
Q ss_pred HhhccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCE
Q psy775 135 KTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPL 214 (1460)
Q Consensus 135 ~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDv 214 (1460)
.+.+++|.||++++++++.||+||||++|||+|||+++...|++++|++|++||++||++|++.++ +||+
T Consensus 67 ~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~----------~~d~ 136 (726)
T PRK14501 67 RLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIAR----------PGDV 136 (726)
T ss_pred hccCceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcC----------CCCE
Confidence 346789999999999999999999999999999999999999999999999999999999999875 6999
Q ss_pred EEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhc
Q psy775 215 VWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 294 (1460)
Q Consensus 215 VwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riL 294 (1460)
|||||||||+||+|||++.| +++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|.+++
T Consensus 137 vwvhDYhl~l~p~~lr~~~~----~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l 212 (726)
T PRK14501 137 VWVHDYQLMLLPAMLRERLP----DARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVL 212 (726)
T ss_pred EEEeCchhhhHHHHHHhhCC----CCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHc
Confidence 99999999999999998755 89999999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 295 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 295 g~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
+.+.... .++++||.++|.++|+|||++.|.+...... .+++ .++++|++|||+++.||+..+|+||++|
T Consensus 213 ~~~~~~~--~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~l 290 (726)
T PRK14501 213 GYETELG--EIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290 (726)
T ss_pred CCccCCC--eEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHH
Confidence 9776543 4789999999999999999999987653321 1222 6789999999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
++++|+++++++|+|++.|++.+.++|+++++++++++++||++||+.+|.|++++++.+++++++++|++||||++||+
T Consensus 291 l~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~ 370 (726)
T PRK14501 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL 370 (726)
T ss_pred HHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCC
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNC 526 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~ 526 (1460)
+||||||++||||||.+. .|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.++++.|++++++++.+++
T Consensus 371 ~EG~~lv~~Eama~~~~~-~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~- 448 (726)
T PRK14501 371 RDGMNLVAKEYVASRTDG-DGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYD- 448 (726)
T ss_pred ccccCcccceEEEEcCCC-CceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC-
Confidence 999999999999999876 899999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC--
Q psy775 527 PGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-- 604 (1460)
Q Consensus 527 ~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-- 604 (1460)
+++ |++.+++.|+++...+.+... .. ....-....+ .++..+.++++++|+-
T Consensus 449 ---------------~~~-w~~~~l~~l~~~~~~~~~~~~-~~-----~~~~~~~~~~----~~y~~~~~rLi~~D~DGT 502 (726)
T PRK14501 449 ---------------VHK-WASDFLDELREAAEKNKAFAS-KP-----ITPAAAEEII----ARYRAASRRLLLLDYDGT 502 (726)
T ss_pred ---------------HHH-HHHHHHHHHHHHHhhhhcccc-cc-----CCccCHHHHH----HHHHhccceEEEEecCcc
Confidence 666 999999999876543211100 00 0001112222 2556677899999993
Q ss_pred ---C-CCccccccCccHHHHHhhccc--CceeecccHhH
Q psy775 605 ---F-PPWDIFRLFPWSDEILQGMLG--CDMVGFHIEDY 637 (1460)
Q Consensus 605 ---f-P~~e~fr~lP~r~eIL~~LL~--aDlIGFqt~~y 637 (1460)
+ ..++...+.+...+.|+.|.. -..|..-|-+.
T Consensus 503 L~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 503 LVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 2 234455566788889999876 33555555444
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=774.91 Aligned_cols=355 Identities=36% Similarity=0.669 Sum_probs=325.1
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|++||++||+++++.++ ++|+||||||||+++|++|| +.+++.+||||||+|||++|+|++
T Consensus 110 ~~w~~Y~~vN~~FA~~i~~~~~----------~~d~vWVhDYhL~llp~~LR----~~~~~~~IgfFlHiPFPs~eifr~ 175 (487)
T TIGR02398 110 DDWQVFLKVNRAFAEAACLEAA----------EGATVWVHDYNLWLVPGYIR----QLRPDLKIAFFHHTPFPSADVFNI 175 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEecchhhHHHHHHH----HhCCCCeEEEEeeCCCCChHHHhh
Confidence 5699999999999999988642 23799999999999999999 667899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCC-------------------CcEEEECCeEEEEEEeeC
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK-------------------NLLVEHGGRTVRIRPLPI 674 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~-------------------~~~i~~~Gr~v~V~v~Pi 674 (1460)
+|++++||+|||+||+|||||++|++||++||+|++|+++..+ ...+.++||+++|+++|+
T Consensus 176 LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~Pi 255 (487)
T TIGR02398 176 LPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPV 255 (487)
T ss_pred CCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEEC
Confidence 9999999999999999999999999999999999999876542 124889999999999999
Q ss_pred CCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccC
Q psy775 675 AIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTK 754 (1460)
Q Consensus 675 GID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~K 754 (1460)
|||++.|.+.+.+ +++. ++.+++|++ +.++++|+||||||++|
T Consensus 256 GID~~~f~~~~~~-~~~~-----------------~~~~~lr~~-------------------~~~~kiIl~VDRLDy~K 298 (487)
T TIGR02398 256 GTDPERIRSALAA-ASIR-----------------EMMERIRSE-------------------LAGVKLILSAERVDYTK 298 (487)
T ss_pred EecHHHHHHHhcC-chHH-----------------HHHHHHHHH-------------------cCCceEEEEeccccccc
Confidence 9999999876553 2222 123445543 25799999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHH
Q psy775 755 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834 (1460)
Q Consensus 755 Gi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Al 834 (1460)
||++||+||++||++||+|+|||+||||+.|+|+++++|++++++++++|++||++||+.+|+||+|+++.++++++.+|
T Consensus 299 GI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~al 378 (487)
T TIGR02398 299 GILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAW 378 (487)
T ss_pred CHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhh
Q psy775 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFV 914 (1460)
Q Consensus 835 y~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~ 914 (1460)
|++|||+++||+||||||||+||||||.+. +||||+|||+|+++
T Consensus 379 Yr~ADV~lvT~lrDGmNLVa~Eyva~~~~~-~GvLILSefaGaa~----------------------------------- 422 (487)
T TIGR02398 379 FAMADVMWITPLRDGLNLVAKEYVAAQGLL-DGVLVLSEFAGAAV----------------------------------- 422 (487)
T ss_pred HHhCCEEEECccccccCcchhhHHhhhcCC-CCCEEEeccccchh-----------------------------------
Confidence 999999999999999999999999999865 79999999999887
Q ss_pred hcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 915 ACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 915 ~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
+|++|++|||||++++|++|++||+||.+||+.|+++++++|.+||+.+|+++||++|.
T Consensus 423 ---------------------~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 423 ---------------------ELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred ---------------------hcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 55689999999999999999999999999999999999999999999999999999986
Q ss_pred hh
Q psy775 995 TL 996 (1460)
Q Consensus 995 ~~ 996 (1460)
..
T Consensus 482 ~~ 483 (487)
T TIGR02398 482 PQ 483 (487)
T ss_pred hc
Confidence 43
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-83 Score=772.22 Aligned_cols=355 Identities=52% Similarity=0.917 Sum_probs=283.7
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|++||+.||+++++.++ + +|+||||||||+++|++|| +.+++.+||||||+|||++|+|+
T Consensus 118 ~~~w~~Y~~vN~~FA~~i~~~~~----~------~D~VWVhDYhL~llP~~LR----~~~~~~~IgfFlHiPFPs~e~fr 183 (474)
T PF00982_consen 118 EEWWEAYKRVNRRFADAIAEVYR----P------GDLVWVHDYHLMLLPQMLR----ERGPDARIGFFLHIPFPSSEIFR 183 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG------T------T-EEEEESGGGTTHHHHHH----HTT--SEEEEEE-S----HHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc----C------CCEEEEeCCcHHHHHHHHH----hhcCCceEeeEEecCCCCHHHHh
Confidence 35799999999999999998764 2 2799999999999999999 67789999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++||+|||+||+|||||++|++||++||+|++|+++......+.|+||.++|.++|+|||++.|.+.+.+ +++.
T Consensus 184 ~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~-~~v~ 262 (474)
T PF00982_consen 184 CLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS-PEVQ 262 (474)
T ss_dssp TSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH--S---
T ss_pred hCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC-hHHH
Confidence 999999999999999999999999999999999999999887765479999999999999999999999887764 3232
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCC-CEEEEEEcCccccCCHHHHHHHHHHHHHhCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 771 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~-kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P 771 (1460)
++++++|+.+ ++ +++|+||||+|++|||++||+||++||++||
T Consensus 263 -----------------~~~~~l~~~~-------------------~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P 306 (474)
T PF00982_consen 263 -----------------ERAEELREKF-------------------KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYP 306 (474)
T ss_dssp -----------------HHHHHHHHHT-------------------TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-G
T ss_pred -----------------HHHHHHHHhc-------------------CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCc
Confidence 2345555542 45 5999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCC
Q psy775 772 EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMN 851 (1460)
Q Consensus 772 ~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmn 851 (1460)
+|+|||+|+||+.|+++++++|++++++++++|++||++||+.+|+||+|+++.+++++++|||++|||+++||+|||||
T Consensus 307 ~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmN 386 (474)
T PF00982_consen 307 EYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMN 386 (474)
T ss_dssp GGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--
T ss_pred CccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEecccc
Q psy775 852 LVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFA 931 (1460)
Q Consensus 852 Lva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~ 931 (1460)
|||+||+|||++. +|+||+|||+|+++
T Consensus 387 Lva~Eyva~q~~~-~GvLiLSefaGaa~---------------------------------------------------- 413 (474)
T PF00982_consen 387 LVAKEYVACQDDN-PGVLILSEFAGAAE---------------------------------------------------- 413 (474)
T ss_dssp HHHHHHHHHS-TS---EEEEETTBGGGG----------------------------------------------------
T ss_pred CcceEEEEEecCC-CCceEeeccCCHHH----------------------------------------------------
Confidence 9999999999885 89999999999888
Q ss_pred CCccccc-ceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhh
Q psy775 932 GAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 932 G~~~~l~-~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
+|+ +|++|||||++++|+||++||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 414 ----~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 414 ----QLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp ----T-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred ----HcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 344 679999999999999999999999999999999999999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-81 Score=795.76 Aligned_cols=466 Identities=34% Similarity=0.558 Sum_probs=399.9
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|++||++||+++.+.++ ++|+||||||||+++|++|| +.+++.+||||||+|||++|+|++
T Consensus 125 ~~w~~Y~~vN~~FA~~i~~~~~----------~~d~vWvhDYhL~llp~~lR----~~~~~~~igfFlHiPFPs~e~fr~ 190 (797)
T PLN03063 125 SQYDAYKKANRMFLDVVKENYE----------EGDVVWCHDYHLMFLPQYLK----EYNNKMKVGWFLHTPFPSSEIYKT 190 (797)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEecchhhhHHHHHH----HhCCCCcEEEEecCCCCCHHHHhh
Confidence 4699999999999999998752 23799999999999999999 668899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID 693 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~ 693 (1460)
+|+|++||++||+||+|||||++|+|||+++|+|++|+++... .+.++|+.++|.++|+|||++.|.+.... +.+.
T Consensus 191 lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~--~i~~~gr~~~I~viP~GID~~~f~~~~~~-~~~~- 266 (797)
T PLN03063 191 LPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE--GVVDQGKVTRVAVFPIGIDPERFINTCEL-PEVK- 266 (797)
T ss_pred CCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC--ceEECCeEEEEEEEecccCHHHHHHHhcC-hhHH-
Confidence 9999999999999999999999999999999999999876654 47899999999999999999999865442 2111
Q ss_pred cchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC
Q psy775 694 TKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 773 (1460)
Q Consensus 694 ~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~ 773 (1460)
++.+.+|+. +.++++|++|||||+.||+.++|+||++||++||++
T Consensus 267 ----------------~~~~~lr~~-------------------~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~ 311 (797)
T PLN03063 267 ----------------QHMKELKRF-------------------FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEW 311 (797)
T ss_pred ----------------HHHHHHHHh-------------------cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccc
Confidence 111233322 257899999999999999999999999999999999
Q ss_pred CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc
Q psy775 774 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 853 (1460)
Q Consensus 774 ~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv 853 (1460)
+++++|+|++.|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+|+.++|++|||||+||++||||||
T Consensus 312 ~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv 391 (797)
T PLN03063 312 RDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLV 391 (797)
T ss_pred cCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCC
Q psy775 854 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGA 933 (1460)
Q Consensus 854 a~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~ 933 (1460)
++|||||+.+. +|++|+|||+|+++.++
T Consensus 392 ~lEamA~g~p~-~gvlVlSe~~G~~~~l~--------------------------------------------------- 419 (797)
T PLN03063 392 SYEFVACQKAK-KGVLVLSEFAGAGQSLG--------------------------------------------------- 419 (797)
T ss_pred hhhHheeecCC-CCCEEeeCCcCchhhhc---------------------------------------------------
Confidence 99999999876 89999999999887211
Q ss_pred cccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccCC-------CCCc
Q psy775 934 GEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGD-------DVLP 1006 (1460)
Q Consensus 934 ~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~-------~~~~ 1006 (1460)
.+|++|||||++++|++|.+||+|+++||+.|++++++++.+||+.+|+++|+++|.....++.. .+..
T Consensus 420 ----~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~~~~l~~ 495 (797)
T PLN03063 420 ----AGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNIPLELPE 495 (797)
T ss_pred ----CCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCH
Confidence 46899999999999999999999999999999999999999999999999999999988753321 1223
Q ss_pred ccchHHhHhhhhcceeeeec----cC----C-------CccccccccChHHHHHHhhhc----------ccchhhhhhhc
Q psy775 1007 TTLIADEQNLKFKLGFFLHI----PF----P-------PWDIFRLFPWSDEILQGMLGK----------ASLGLLSWLCN 1061 (1460)
Q Consensus 1007 ~~~~~~~~~~k~~~~f~~~i----~e----~-------~~~~~~~~~~~~~il~~l~~~----------~~~~~~~~l~~ 1061 (1460)
..+...|+++++++ ||+++ .. | |++ +++ ++|+.||+. +++..|+.+..
T Consensus 496 ~~~~~~y~~a~~rl-l~LDyDGTL~~~~~~~~~p~~a~p~~--~l~----~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 496 QDVIQQYSKSNNRL-LILGFYGTLTEPRNSQIKEMDLGLHP--ELK----ETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred HHHHHHHHhccCeE-EEEecCccccCCCCCccccccCCCCH--HHH----HHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 56678899999995 77765 11 1 333 455 788999875 56677888887
Q ss_pred cccccccccCceeccceeeecC-CCCcccc-c--cCCChHHHhh----------c---ccccceeeeecccccccc
Q psy775 1062 TIKNIADEQNLKFKLGFFLHIP-FPPWDIF-R--LFPWSDEILQ----------G---MLGCDMVGFHIEDYCLNF 1120 (1460)
Q Consensus 1062 ~~~n~~~~~~l~ae~g~~~r~~-~~~~~~~-~--~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~ 1120 (1460)
.+ |+ ||+||||+|+|.+ |.|.... . +.+|++.+.. | ......+.||..++...|
T Consensus 569 ~~-~l----~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~ 639 (797)
T PLN03063 569 EY-NI----WLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEF 639 (797)
T ss_pred CC-CC----cEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHH
Confidence 65 78 9999999999954 4777542 3 5789976643 4 446678999999996555
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-81 Score=748.86 Aligned_cols=354 Identities=46% Similarity=0.827 Sum_probs=322.6
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
..+|..|++||++||+++++.++ ++|+||||||||+|+|++|| +.+++++||||||+|||++|+|+
T Consensus 124 ~~~w~~Y~~vN~~FAd~i~~~~~----------~gDiIWVhDYhL~L~P~mlR----~~~~~~~IgfFlHiPfPssEvfr 189 (486)
T COG0380 124 RNWWDAYVKVNRKFADKIVEIYE----------PGDIIWVHDYHLLLVPQMLR----ERIPDAKIGFFLHIPFPSSEVFR 189 (486)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEEechhhhhHHHHH----HhCCCceEEEEEeCCCCCHHHHh
Confidence 56799999999999999999763 23799999999999999999 67899999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEE---ECCeEEEEEEeeCCCChhHHhHHHhcCc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE---HGGRTVRIRPLPIAIPYERFVQLAQAAP 689 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~---~~Gr~v~V~v~PiGID~~~f~~~~~~~~ 689 (1460)
|+|+|++||+|||+||+|||||++|++||++||+|+++.+... .+. ++|+.++|..+|||||+..|...+.+.
T Consensus 190 ~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~---~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~- 265 (486)
T COG0380 190 CLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA---DIRFNGADGRIVKVGAFPIGIDPEEFERALKSP- 265 (486)
T ss_pred hCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccc---cccccccCCceEEEEEEeeecCHHHHHHhhcCC-
Confidence 9999999999999999999999999999999999999865221 233 448999999999999999998876542
Q ss_pred cccccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHh
Q psy775 690 RVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEK 769 (1460)
Q Consensus 690 ~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~ 769 (1460)
.+. .+..++++.+ ..++++|++|||||++||+++||+||++||++
T Consensus 266 ~v~-----------------~~~~el~~~~------------------~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~ 310 (486)
T COG0380 266 SVQ-----------------EKVLELKAEL------------------GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEE 310 (486)
T ss_pred chh-----------------hHHHHHHHHh------------------cCCceEEEEehhcccccCcHHHHHHHHHHHHh
Confidence 221 1223444432 24599999999999999999999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccC
Q psy775 770 HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDG 849 (1460)
Q Consensus 770 ~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEG 849 (1460)
||+|+|||+|+|++.||+++.++|+.++++++++|++||++||+.+|+||+|+++.+++++++|||++||++++||+|||
T Consensus 311 ~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDG 390 (486)
T COG0380 311 YPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDG 390 (486)
T ss_pred ChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEecc
Q psy775 850 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSP 929 (1460)
Q Consensus 850 mnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~se 929 (1460)
||||++||+|||..+ +|+||+|||+|++.
T Consensus 391 MNLvakEyVa~q~~~-~G~LiLSeFaGaa~-------------------------------------------------- 419 (486)
T COG0380 391 MNLVAKEYVAAQRDK-PGVLILSEFAGAAS-------------------------------------------------- 419 (486)
T ss_pred ccHHHHHHHHhhcCC-CCcEEEeccccchh--------------------------------------------------
Confidence 999999999999854 89999999999887
Q ss_pred ccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 930 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 930 f~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.|.+|++|||||.+++|++|++||+|+.+||+.|++.|++.|.+||+++|+.+|+++|...
T Consensus 420 ------~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 420 ------ELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred ------hhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 5567999999999999999999999999999999999999999999999999999999873
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-77 Score=730.38 Aligned_cols=388 Identities=51% Similarity=0.903 Sum_probs=360.3
Q ss_pred HHhhccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q psy775 134 LKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTP 213 (1460)
Q Consensus 134 ~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gD 213 (1460)
....+++|.||++++++++.||+||||++|||+|||.++...|++++|++|++||++||++|++.++ ++|
T Consensus 64 ~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~----------~~d 133 (460)
T cd03788 64 ELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR----------PGD 133 (460)
T ss_pred hhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC----------CCC
Confidence 3456789999999999999999999999999999999999999999999999999999999999875 699
Q ss_pred EEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhh
Q psy775 214 LVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRR 293 (1460)
Q Consensus 214 vVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~ri 293 (1460)
+||||||||+++|++||++.| +++||||||||||++|+|+++|+|++|++|||+||+||||+++|++||+++|+++
T Consensus 134 ~iwihDyhl~llp~~lr~~~~----~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~ 209 (460)
T cd03788 134 LVWVHDYHLLLLPQMLRERGP----DARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRL 209 (460)
T ss_pred EEEEeChhhhHHHHHHHhhCC----CCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHH
Confidence 999999999999999998754 8999999999999999999999999999999999999999999999999999999
Q ss_pred cCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 294 LGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 294 Lg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
++.+.... ..+.++|+.++|.++|+|||++.|.+...... +... .++++|++|||+++.||+..+|+||++
T Consensus 210 l~~~~~~~-~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ 288 (460)
T cd03788 210 LGLEVTDD-GGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFER 288 (460)
T ss_pred cCCcccCC-ceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHH
Confidence 98876542 35889999999999999999999986543221 1112 678999999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+++++|+++++++|+|++.|+++++++|+++++++++++++||.+||..+|.||+++.|.++.+++.++|++||+||+||
T Consensus 289 ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS 368 (460)
T cd03788 289 LLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTP 368 (460)
T ss_pred HHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+||||||++|||||+.|. +|++|+|+++|+++++.+|++|||+|++++|+||.++|+|++++++.+++++++.+.+++
T Consensus 369 ~~Eg~~lv~lEAma~g~p~-~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~ 447 (460)
T cd03788 369 LRDGMNLVAKEYVACQDDD-PGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHD 447 (460)
T ss_pred cccccCcccceeEEEecCC-CceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999995 899999999999999888999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCcchhhhhhhHHHHHHHHHHH
Q psy775 526 CPGQSSLGGNTSAYAQVNQEFADKTIKAL 554 (1460)
Q Consensus 526 ~~~~~sl~~~~~~Y~~VNq~fAd~~le~l 554 (1460)
+++ |+++++..+
T Consensus 448 ----------------~~~-w~~~~l~~l 459 (460)
T cd03788 448 ----------------VQA-WANSFLDDL 459 (460)
T ss_pred ----------------HHH-HHHHHHHhh
Confidence 555 999988653
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-76 Score=750.58 Aligned_cols=497 Identities=38% Similarity=0.647 Sum_probs=412.0
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|+++|++||+++.+.++ + +|+||||||||+++|++|| +.+++.+||||||+|||++++|++
T Consensus 111 ~~w~~Y~~vN~~fA~~~~~~~~---~-------~d~vwvhDYhl~l~p~~lr----~~~~~~~igfFlH~pfP~~~~f~~ 176 (726)
T PRK14501 111 RFWESYERVNQRFAEAIAAIAR---P-------GDVVWVHDYQLMLLPAMLR----ERLPDARIGFFLHIPFPSFEVFRL 176 (726)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---C-------CCEEEEeCchhhhHHHHHH----hhCCCCcEEEEeeCCCCChHHHhh
Confidence 4699999999999999998653 2 2799999999999999999 667899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID 693 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~ 693 (1460)
+|++++||++||+||+|||||++|++||++||+|++++++... .+.++||.++|.++|+|||++.|.+.... +.+.
T Consensus 177 lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~--~~~~~gr~~~v~v~p~GID~~~f~~~~~~-~~~~- 252 (726)
T PRK14501 177 LPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG--EIRLGGRIVRVDAFPMGIDYDKFHNSAQD-PEVQ- 252 (726)
T ss_pred CCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC--eEEECCEEEEEEEEECeEcHHHHHHHhcC-chHH-
Confidence 9999999999999999999999999999999999999876543 58899999999999999999999876542 2111
Q ss_pred cchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC
Q psy775 694 TKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 773 (1460)
Q Consensus 694 ~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~ 773 (1460)
+..+++|+. ..++++|++|||+++.||+..+|+||++|+++||++
T Consensus 253 ----------------~~~~~lr~~-------------------~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~ 297 (726)
T PRK14501 253 ----------------EEIRRLRQD-------------------LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEW 297 (726)
T ss_pred ----------------HHHHHHHHH-------------------cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccc
Confidence 112233322 267899999999999999999999999999999999
Q ss_pred CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc
Q psy775 774 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 853 (1460)
Q Consensus 774 ~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv 853 (1460)
+|+++|+|++.|++.+.++|+++++++++++++||++||+.+|.|++++++.++++|++++|++||||++||++||||||
T Consensus 298 ~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv 377 (726)
T PRK14501 298 RGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLV 377 (726)
T ss_pred cCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCC
Q psy775 854 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGA 933 (1460)
Q Consensus 854 a~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~ 933 (1460)
++|||||+.+. +|++|+|+++|++.
T Consensus 378 ~~Eama~~~~~-~g~~vls~~~G~~~------------------------------------------------------ 402 (726)
T PRK14501 378 AKEYVASRTDG-DGVLILSEMAGAAA------------------------------------------------------ 402 (726)
T ss_pred cceEEEEcCCC-CceEEEecccchhH------------------------------------------------------
Confidence 99999999875 78999999999777
Q ss_pred cccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccCC---CCC----c
Q psy775 934 GEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGD---DVL----P 1006 (1460)
Q Consensus 934 ~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~---~~~----~ 1006 (1460)
++.+|++|||||++++|++|.++|+|+.+|++.|++++++++.++|+.+|+++|++.+.+.+.++.. ..+ .
T Consensus 403 --~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 480 (726)
T PRK14501 403 --ELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKPITPAAA 480 (726)
T ss_pred --HhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccccccCCccCH
Confidence 2345799999999999999999999999999999999999999999999999999999998754321 111 2
Q ss_pred ccchHHhHhhhhcceeeeec----c----C----CCccccccccChHHHHHHhhhc----------ccchhhhhhhcccc
Q psy775 1007 TTLIADEQNLKFKLGFFLHI----P----F----PPWDIFRLFPWSDEILQGMLGK----------ASLGLLSWLCNTIK 1064 (1460)
Q Consensus 1007 ~~~~~~~~~~k~~~~f~~~i----~----e----~~~~~~~~~~~~~~il~~l~~~----------~~~~~~~~l~~~~~ 1064 (1460)
..+...|+.+|+|+ |++++ . . .|+. +++ +.|+.|+++ +++..++.++..+
T Consensus 481 ~~~~~~y~~~~~rL-i~~D~DGTL~~~~~~~~~~~~~~--~~~----~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~- 552 (726)
T PRK14501 481 EEIIARYRAASRRL-LLLDYDGTLVPFAPDPELAVPDK--ELR----DLLRRLAADPNTDVAIISGRDRDTLERWFGDL- 552 (726)
T ss_pred HHHHHHHHhccceE-EEEecCccccCCCCCcccCCCCH--HHH----HHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-
Confidence 46678899999995 77776 1 1 1333 455 778899883 4667777777665
Q ss_pred ccccccCceeccceeeecCC-CCccccc-cCCChHHHhh----------c---ccccceeeeeccccccccccc----cc
Q psy775 1065 NIADEQNLKFKLGFFLHIPF-PPWDIFR-LFPWSDEILQ----------G---MLGCDMVGFHIEDYCLNFVDC----CQ 1125 (1460)
Q Consensus 1065 n~~~~~~l~ae~g~~~r~~~-~~~~~~~-~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~~----~~ 1125 (1460)
++ ++++|||+|+|.+| .|..... +.+|++.+.+ | .-.+..+.||..+++..|... +.
T Consensus 553 ~l----~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~ 628 (726)
T PRK14501 553 PI----HLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELI 628 (726)
T ss_pred Ce----EEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHH
Confidence 56 89999999999766 6766554 6789866553 2 112345789999887666443 22
Q ss_pred ccccccccccccccccCCeEEEEeccc
Q psy775 1126 RRLGCRVDRKNLLVEHGGRTVRIRPLP 1152 (1460)
Q Consensus 1126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1460)
..+-..+...++-+-+++..+.|+|--
T Consensus 629 ~~l~~~~~~~~~~v~~g~~~veV~p~~ 655 (726)
T PRK14501 629 LALSSLLSNAPLEVLRGNKVVEVRPAG 655 (726)
T ss_pred HHHHHHhcCCCeEEEECCeEEEEEECC
Confidence 222222333444445677778888753
|
|
| >KOG1050|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-73 Score=701.65 Aligned_cols=489 Identities=36% Similarity=0.547 Sum_probs=435.3
Q ss_pred cchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccC
Q psy775 535 NTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF 614 (1460)
Q Consensus 535 ~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~l 614 (1460)
.|.+|..+|+.|++++++.|+ + +|+||||||||+++|.++| +...+.+|+||+|.|||++|+++++
T Consensus 119 ~w~~y~~~n~~f~d~ive~~~----~------~d~vwihdyhlmllp~~lr----~~~~~~~ig~flhspfpssEi~r~l 184 (732)
T KOG1050|consen 119 LWKAYVKVNQAFADKIVEVYE----E------GDIVWIHDYHLMLLPQMLR----ERFNSAKIGFFLHSPFPSSEIYRCL 184 (732)
T ss_pred HHHHHHHHhHHHHHHHHHhcc----C------CCcEEEEcchhhccchhhh----cccccceEEEeccCCCChHHHHHhc
Confidence 588999999999999999875 2 2799999999999999999 5668899999999999999999999
Q ss_pred ccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeC--CCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 615 PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDR--KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 615 P~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~--~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
|.+++||++|++||+|||||++|+|||++||.|++|.++.+ ....+.+.||.+.|.+.|+|||+.+|.+.... +.+.
T Consensus 185 p~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~-~~~~ 263 (732)
T KOG1050|consen 185 PVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL-PYVG 263 (732)
T ss_pred ccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-hhHH
Confidence 99999999999999999999999999999999999988763 34568999999999999999999999887653 2222
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
.+..+++. + ..++++|++|||+|+.||+.+|+.||++||++||+
T Consensus 264 -----------------~~~~ei~~-------~------------~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe 307 (732)
T KOG1050|consen 264 -----------------SKGMEIKE-------P------------FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPE 307 (732)
T ss_pred -----------------HHHHHHhh-------h------------ccCCceEecccccccccCchHHHHHHHHHHHhChh
Confidence 22333332 2 26899999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
|+++|+++|++.|+++++++|++++.++...+.+||++||+..+.||+++...++..++.|+|.+||+++++++||||||
T Consensus 308 ~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl 387 (732)
T KOG1050|consen 308 WIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNL 387 (732)
T ss_pred hhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
+++||++|+.++ .+++|+|||+|+++
T Consensus 388 ~~~e~i~~~~~~-~~~lVlsef~G~~~----------------------------------------------------- 413 (732)
T KOG1050|consen 388 VFLEYILCQENK-KSVLVLSEFIGDDT----------------------------------------------------- 413 (732)
T ss_pred hhhHHHHhhccc-CCceEEeeeccccc-----------------------------------------------------
Confidence 999999998765 57777777777666
Q ss_pred Ccccc-cceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC--CCCC----
Q psy775 933 AGEQM-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG--DDVL---- 1005 (1460)
Q Consensus 933 ~~~~l-~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~--~~~~---- 1005 (1460)
++ ++++++||||.+++|.+|..|++|+.++++.|+..+++++..|++..|++.|+..+.+.+.... ..+.
T Consensus 414 ---tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~~l~ 490 (732)
T KOG1050|consen 414 ---TLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTPLLT 490 (732)
T ss_pred ---cccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcccccccccccC
Confidence 45 7889999999999999999999999999999999999999999999999999998888775432 2333
Q ss_pred cccchHHhHhhhhcceeeee---ccCCCccccccccChHHHHHHhhhc----------ccchhhhhhhccccccccccCc
Q psy775 1006 PTTLIADEQNLKFKLGFFLH---IPFPPWDIFRLFPWSDEILQGMLGK----------ASLGLLSWLCNTIKNIADEQNL 1072 (1460)
Q Consensus 1006 ~~~~~~~~~~~k~~~~f~~~---i~e~~~~~~~~~~~~~~il~~l~~~----------~~~~~~~~l~~~~~n~~~~~~l 1072 (1460)
.+.++.+|+++|+|+ |+++ +..+|.++. ++ ++|++||+. .++..|+.++..++|| ||
T Consensus 491 ~~~~i~~y~~s~~rl-i~ldyd~t~~~~~~~~-~~----~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~l----gl 560 (732)
T KOG1050|consen 491 AEHIVSDYKKSKKRL-ILLDYDLTLIPPRSIK-AI----SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNL----GL 560 (732)
T ss_pred hhHhhhhhhhccceE-EEecccccccCCCCch-HH----HHHHHHhcCCCCeEEEEEccCchhhhhhccccccc----ee
Confidence 378889999999995 9998 788888843 55 999999987 5779998899999999 99
Q ss_pred eeccceeeecCCCCccccccCCChHHHh---h-------c---ccccceeeeeccccccccccccccccccccccccccc
Q psy775 1073 KFKLGFFLHIPFPPWDIFRLFPWSDEIL---Q-------G---MLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLV 1139 (1460)
Q Consensus 1073 ~ae~g~~~r~~~~~~~~~~~~~~~~~~~---~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 (1460)
+||||+|+|+++.|+|.+.+++|++.+- | | ...++++.||.+|| | .++..-+.++..+|+|+
T Consensus 561 ~aEhG~f~r~~~~w~~~~~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~a-d--~~~g~~qA~el~~~l~~-- 635 (732)
T KOG1050|consen 561 AAEHGYFVRIPGKWETCVLDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNA-D--PEFGELQAKELLEHLES-- 635 (732)
T ss_pred ecccCceeccCCceeeecccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeecc-C--cchhHHHHHHHHHHhcc--
Confidence 9999999999999999999999995543 3 5 67899999999999 7 78888888999999999
Q ss_pred ccCCeEE
Q psy775 1140 EHGGRTV 1146 (1460)
Q Consensus 1140 ~~~~~~~ 1146 (1460)
.+.|..|
T Consensus 636 ~~~~~~v 642 (732)
T KOG1050|consen 636 KNEPVEV 642 (732)
T ss_pred cCCCeEE
Confidence 5655544
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-72 Score=676.51 Aligned_cols=351 Identities=50% Similarity=0.844 Sum_probs=320.7
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|++||++||+++.+.++ ++|+||||||||+++|.+|| +.+++.+|+||||+|||++|+|++
T Consensus 105 ~~w~~Y~~vN~~fA~~i~~~~~----------~~d~vwvhDYhl~l~p~~lr----~~~~~~~igfFlHipfP~~e~f~~ 170 (456)
T TIGR02400 105 KAWEAYRRVNRLFAEALAPLLQ----------PGDIVWVHDYHLMLLPAMLR----ELGVQNKIGFFLHIPFPSSEIYRT 170 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC----------CCCEEEEecchhhHHHHHHH----hhCCCCeEEEEEeCCCCChHHHhh
Confidence 4699999999999999998653 23799999999999999999 667889999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID 693 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~ 693 (1460)
+|++++||+|||+||+|||||++|++||++||++++|.++..+. +.++|+.++|.++|+|||++.|.+.... +.+.
T Consensus 171 lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~--~~~~g~~~~v~viP~GID~~~f~~~~~~-~~~~- 246 (456)
T TIGR02400 171 LPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKK-PSVQ- 246 (456)
T ss_pred CCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCc--eEECCcEEEEEEecCcCCHHHHHHHhcC-hhHH-
Confidence 99999999999999999999999999999999999999887653 7789999999999999999999876542 2111
Q ss_pred cchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC
Q psy775 694 TKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 773 (1460)
Q Consensus 694 ~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~ 773 (1460)
+..+.+|+. +.++++|++|||+++.||++.+|+||++|++++|++
T Consensus 247 ----------------~~~~~lr~~-------------------~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~ 291 (456)
T TIGR02400 247 ----------------KRIAELRES-------------------LKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEW 291 (456)
T ss_pred ----------------HHHHHHHHH-------------------cCCCeEEEEccccccccCHHHHHHHHHHHHHhCccc
Confidence 112334432 257899999999999999999999999999999999
Q ss_pred CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc
Q psy775 774 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 853 (1460)
Q Consensus 774 ~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv 853 (1460)
++|++|+|++.|+++++++|+++++++++++++||++||+.+|.|++++.+.++++|++++|++|||||+||++||||||
T Consensus 292 ~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv 371 (456)
T TIGR02400 292 RGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLV 371 (456)
T ss_pred cCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCC
Q psy775 854 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGA 933 (1460)
Q Consensus 854 a~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~ 933 (1460)
++|||||+.+. +|+||+|+++|+++
T Consensus 372 ~lEamA~g~P~-~g~vVlS~~~G~~~------------------------------------------------------ 396 (456)
T TIGR02400 372 AKEYVAAQDPK-DGVLILSEFAGAAQ------------------------------------------------------ 396 (456)
T ss_pred HHHHHHhcCCC-CceEEEeCCCCChH------------------------------------------------------
Confidence 99999999887 59999999999887
Q ss_pred cccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 934 GEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 934 ~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
.+.+|++|||||++++|++|.++|+|+.+||+.|++++++++.+||+.+|+++|+++|.
T Consensus 397 --~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 397 --ELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred --HhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 22357999999999999999999999999999999999999999999999999999875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >KOG1050|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-64 Score=622.41 Aligned_cols=445 Identities=38% Similarity=0.618 Sum_probs=386.5
Q ss_pred HHHhhccCceeeecCcccccccccccccccccccccCC--CCcc---ccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy775 133 LLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSM--PDRA---MFCAEHWRAYAQVNQEFADKTIKALQILAQEEP 207 (1460)
Q Consensus 133 i~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~--~d~~---~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~ 207 (1460)
.......++.|++.+++....+|++|||+.|||+|||. +... .|+.+.|++|+++|++||++|++.|+
T Consensus 67 ~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~~~~~~~w~~y~~~n~~f~d~ive~~~------- 139 (732)
T KOG1050|consen 67 QELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFKLFDLELWKAYVKVNQAFADKIVEVYE------- 139 (732)
T ss_pred hhhhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhhhhhHHHHHHHHHHHhHHHHHHHHHhcc-------
Confidence 44466789999999999999999999999999999998 3332 34588999999999999999999986
Q ss_pred CCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 208 ADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 208 ~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
+||+|||||||||++|+|+|++.. +++||||+|.|||++|+|+|+|.|++|+.||++||+||||+++|+|||+
T Consensus 140 ---~~d~vwihdyhlmllp~~lr~~~~----~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFl 212 (732)
T KOG1050|consen 140 ---EGDIVWIHDYHLMLLPQMLRERFN----SAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFL 212 (732)
T ss_pred ---CCCcEEEEcchhhccchhhhcccc----cceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHH
Confidence 599999999999999999998764 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCceecC--CCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHH
Q psy775 288 DCCQRRLGCRVDR--KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLV 357 (1460)
Q Consensus 288 ~~~~riLg~~~~~--~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~ 357 (1460)
++|.|+++.++.. +..++.+.||.+.|.+.|+|||+.+|........ ++.. +|+++|++|||+|+.||+.
T Consensus 213 s~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~ 292 (732)
T KOG1050|consen 213 STCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQ 292 (732)
T ss_pred HHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCch
Confidence 9999999987763 3456899999999999999999999977644322 2222 6899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
+++.||++++++||+++++|+++|++.|++.++++|++++.++...+.+||++||+..+.||+++...++..++.++|..
T Consensus 293 ~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~V 372 (732)
T KOG1050|consen 293 LKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKV 372 (732)
T ss_pred HHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc-cccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 438 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 438 ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L-~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
||+++++|++|||||+++||++|+... .|++|+|+|+|+++.+ .+++++||||.++++.+|..+|+|+.++++.|+..
T Consensus 373 aev~~v~s~rdGmnl~~~e~i~~~~~~-~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~ 451 (732)
T KOG1050|consen 373 AEVCPVTSWRDGMNLVFLEYILCQENK-KSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPK 451 (732)
T ss_pred hhheeecccccccchhhhHHHHhhccc-CCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchh
Confidence 999999999999999999999999875 8999999999999999 67999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCC-CCCCCceeeccccccccHHHHHHHHhhcCcCc
Q psy775 517 LRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPA-DSGTPLVWIHDYHLMLAANTIRNIADEQNLKF 595 (1460)
Q Consensus 517 l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s-~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~ 595 (1460)
....+..++ + ..|+..++..+.++...+.. .+..+ + +.+..+- ..++.+.
T Consensus 452 ~~~~v~~~~----------------~-~~W~~~~~~~l~~~~~~~~~~~~~~~------~---l~~~~~i---~~y~~s~ 502 (732)
T KOG1050|consen 452 HYKYVSTHD----------------V-VYWAKSFLQGLKRIWKVGFLGFRVTP------L---LTAEHIV---SDYKKSK 502 (732)
T ss_pred hhhhhcchh----------------H-HHHHHHHHHhhhhhhhhccccccccc------c---cChhHhh---hhhhhcc
Confidence 999988777 3 34888888865554433211 11111 1 2223222 2677889
Q ss_pred eEEEEeeC---CC-CCccccccCccHHHHHhhcccC
Q psy775 596 KLGFFLHI---PF-PPWDIFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 596 kigfFLHi---Pf-P~~e~fr~lP~r~eIL~~LL~a 627 (1460)
++.|+|+| +. |.+.. ...+|+.|+.-
T Consensus 503 ~rli~ldyd~t~~~~~~~~------~~~~l~~L~~d 532 (732)
T KOG1050|consen 503 KRLILLDYDLTLIPPRSIK------AISILKDLCSD 532 (732)
T ss_pred ceEEEecccccccCCCCch------HHHHHHHHhcC
Confidence 99999996 43 33332 66777775543
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-63 Score=599.62 Aligned_cols=353 Identities=52% Similarity=0.922 Sum_probs=318.0
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|+++|+.||+++.+.++ +.|+||||||||+++|.++| +.+++.+++||+|+|||++++|+
T Consensus 108 ~~~w~~Y~~vN~~fa~~i~~~~~----------~~d~iwihDyhl~llp~~lr----~~~~~~~i~~f~HipfP~~e~~~ 173 (460)
T cd03788 108 REDWEAYVRVNRKFADAIAEVLR----------PGDLVWVHDYHLLLLPQMLR----ERGPDARIGFFLHIPFPSSEIFR 173 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEeChhhhHHHHHHH----hhCCCCeEEEEEeCCCCChHHHh
Confidence 46799999999999999998653 23799999999999999999 56788999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++||++|++||+|||||++|++||+++|+++++.+... ...+.++|+.++|.++|+|||++.|.+.... +...
T Consensus 174 ~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~-~~~i~~~g~~~~i~vip~GID~~~f~~~~~~-~~~~ 251 (460)
T cd03788 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD-DGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS-PEVQ 251 (460)
T ss_pred hCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccC-CceEEECCEEEEEEEEeCeEcHHHHHHHhcC-chhH
Confidence 9999999999999999999999999999999999999887654 2468999999999999999999999865432 1111
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
+.+++.. ....++++|++|||+++.||+..+|+||+++++++|+
T Consensus 252 --------------------~~~~~~~----------------~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~ 295 (460)
T cd03788 252 --------------------ERAAELR----------------ERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPE 295 (460)
T ss_pred --------------------HHHHHHH----------------HhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChh
Confidence 1111110 0136789999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
++++++|+|+|.|+++++++|+++++++++++++||.+||+.+|.|++++.|.++.+++.++|++|||+|+||.+|||||
T Consensus 296 ~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~l 375 (460)
T cd03788 296 WRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNL 375 (460)
T ss_pred hcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
|++|||||+.+. +|+||+|+++|+++
T Consensus 376 v~lEAma~g~p~-~g~vV~S~~~G~~~----------------------------------------------------- 401 (460)
T cd03788 376 VAKEYVACQDDD-PGVLILSEFAGAAE----------------------------------------------------- 401 (460)
T ss_pred ccceeEEEecCC-CceEEEeccccchh-----------------------------------------------------
Confidence 999999999885 89999999999877
Q ss_pred CcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 933 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 933 ~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
.+.++++|||+|++++|++|.++|+|++++++.+++++++++.++++..|+++|+++|.
T Consensus 402 ---~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l~ 460 (460)
T cd03788 402 ---ELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460 (460)
T ss_pred ---hcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhhC
Confidence 12467999999999999999999999999999999999999999999999999998873
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-21 Score=231.91 Aligned_cols=257 Identities=19% Similarity=0.267 Sum_probs=182.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|+||+.. .+...++++.| +.++.+.+|-.|.. + +++ .++.|-+.+. +.+.++...
T Consensus 99 ~~~vi~v~~~~--~~~~~~~~~~~----~~~~v~~~h~~~~~-~----------~~~---~~~~ii~~S~-~~~~~~~~~ 157 (380)
T PRK15484 99 KDSVIVIHNSM--KLYRQIRERAP----QAKLVMHMHNAFEP-E----------LLD---KNAKIIVPSQ-FLKKFYEER 157 (380)
T ss_pred CCcEEEEeCcH--HhHHHHHhhCC----CCCEEEEEecccCh-h----------Hhc---cCCEEEEcCH-HHHHHHHhh
Confidence 58999999843 33445666544 68899999976632 1 121 3566666654 333333310
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-hhhhc--cCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA-PRVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~-~~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
....++.++|+|+|.+.|.+..... ..... .++++|+++||+.+.||+..+++|+.++.
T Consensus 158 ------------------~~~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~ 219 (380)
T PRK15484 158 ------------------LPNADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLA 219 (380)
T ss_pred ------------------CCCCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHH
Confidence 0112467899999998876432111 11111 46789999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|++ .|+++|.+......+..++++++.+++.+.+.+ +.+.|.++.+++..+|++||++|+||.+
T Consensus 220 ~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~---------v~~~G~~~~~~l~~~~~~aDv~v~pS~~ 286 (380)
T PRK15484 220 TAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDR---------CIMLGGQPPEKMHNYYPLADLVVVPSQV 286 (380)
T ss_pred HhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCCc---------EEEeCCCCHHHHHHHHHhCCEEEeCCCC
Confidence 989875 477777654332223345666666666555432 3456999999999999999999999975
Q ss_pred -CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cE-EECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 448 -DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---AL-ICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 448 -EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---al-lVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||||++++||||| |.|+|+|..+|..+.+.+ |+ +++|.|++++|++|.++++++.. +++..++......
T Consensus 287 ~E~f~~~~lEAma~-----G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~ 360 (380)
T PRK15484 287 EEAFCMVAVEAMAA-----GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAEQAKDFVFS 360 (380)
T ss_pred ccccccHHHHHHHc-----CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHH
Confidence 9999999999999 677899998888877743 65 67899999999999999998764 4455444444555
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
+++
T Consensus 361 ~fs 363 (380)
T PRK15484 361 KYS 363 (380)
T ss_pred hCC
Confidence 566
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.7e-22 Score=232.62 Aligned_cols=284 Identities=20% Similarity=0.224 Sum_probs=187.3
Q ss_pred cCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccc
Q psy775 176 FCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDI 255 (1460)
Q Consensus 176 f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~ei 255 (1460)
+....+..|..+++.++..+.+ ....|+|++||++.+.++...+. .+.++.+++|.++..+.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~Dvv~~h~~~~~~~~~~~~~------~~~~~i~~~H~~~~~~~- 122 (372)
T cd03792 61 LSEEEKEIYLEWNEENAERPLL-----------DLDADVVVIHDPQPLALPLFKKK------RGRPWIWRCHIDLSSPN- 122 (372)
T ss_pred CCHHHHHHHHHHHHHHhccccc-----------cCCCCEEEECCCCchhHHHhhhc------CCCeEEEEeeeecCCCc-
Confidence 3455788899888888765211 12479999999998777665542 14678889999885422
Q ss_pred cccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhh-hh--cc
Q psy775 256 FRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ-LA--QA 332 (1460)
Q Consensus 256 fr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~-~~--~~ 332 (1460)
+ ..+..+...+..+|.+.+.+.++++.+ +..+ ++ ++|+|||+..... .. ..
T Consensus 123 -~--~~~~~~~~~~~~~d~~i~~~~~~~~~~--------------------~~~~--~~-vipngvd~~~~~~~~~~~~~ 176 (372)
T cd03792 123 -R--RVWDFLQPYIEDYDAAVFHLPEYVPPQ--------------------VPPR--KV-IIPPSIDPLSGKNRELSPAD 176 (372)
T ss_pred -H--HHHHHHHHHHHhCCEEeecHHHhcCCC--------------------CCCc--eE-EeCCCCCCCccccCCCCHHH
Confidence 0 112233344445677666663332110 1112 23 8999999753211 10 01
Q ss_pred chhhhc-----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q psy775 333 APRVID-----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 407 (1460)
Q Consensus 333 ~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~I 407 (1460)
....++ .++++|+++||+++.||+..+++||+.+.+++|++ .|+++|.+...+ +++.++.+++.+ +.
T Consensus 177 ~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~~~~---~~ 248 (372)
T cd03792 177 IEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEEVLE---YA 248 (372)
T ss_pred HHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHHHHH---Hh
Confidence 111111 56789999999999999999999999998887875 477777553221 223333333222 11
Q ss_pred hcccCCCCcccEEEEcCC--CCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--
Q psy775 408 NGRFTTPNWSPIRYIYGC--ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-- 483 (1460)
Q Consensus 408 N~~fg~~~~~pIv~~~g~--v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~-- 483 (1460)
+.. ..+.++ +. ++.+++.++|++||+|++||.+||||++++||||| |.|+|+|..+|..+.+.+
T Consensus 249 ~~~------~~v~~~-~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-----G~Pvv~s~~~~~~~~i~~~~ 316 (372)
T cd03792 249 EGD------PDIHVL-TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-----GKPVIAGPVGGIPLQIEDGE 316 (372)
T ss_pred CCC------CCeEEE-ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-----CCCEEEcCCCCchhhcccCC
Confidence 111 134554 44 49999999999999999999999999999999999 677899999998888843
Q ss_pred -cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 484 -ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 484 -allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+++++ .+++|++|.+++++++..++++.++.+....+++
T Consensus 317 ~g~~~~~--~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 357 (372)
T cd03792 317 TGFLVDT--VEEAAVRILYLLRDPELRRKMGANAREHVRENFL 357 (372)
T ss_pred ceEEeCC--cHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcC
Confidence 788864 6789999999998765544444444333445566
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-19 Score=213.75 Aligned_cols=274 Identities=18% Similarity=0.165 Sum_probs=190.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccc---cCCC--cHHHH--hhhccCceeeeccHHhH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR---LFPW--SDEIL--QGMLGCDMVGFHIEDYC 283 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr---~LP~--r~eil--~gLL~aDlIgF~t~~ya 283 (1460)
..|+|-+|++.-.+++.++++.. +.++.+.+|.-++-...+. ..|. ...++ ..+-.+|.|.+.+...+
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~~-----~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~ 175 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDRW-----GVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEA 175 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHhc-----CCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHH
Confidence 47999999866655666665432 4678888886432111110 0111 11222 23446899999998887
Q ss_pred HHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-c--cCCeEEEEecCccccCCHHHHH
Q psy775 284 LNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-D--TKQKIVLGVDRLDYTKGLVHRL 360 (1460)
Q Consensus 284 r~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-~--~~~kvIL~VgRLd~~KGI~~lL 360 (1460)
+.+... ++....++.++|+|+|.+.|.+......+.. . .++++|+++||+.+.||+..++
T Consensus 176 ~~~~~~-----------------~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li 238 (405)
T TIGR03449 176 RDLVRH-----------------YDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVVAFVGRIQPLKAPDVLL 238 (405)
T ss_pred HHHHHH-----------------cCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHH
Confidence 776652 1122346788999999988864321111111 1 4578999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccE
Q psy775 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 440 (1460)
Q Consensus 361 ~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV 440 (1460)
+|++++++++|+. ++.|+++|.+.....+..++++ +++.+.+ ....+.+.|.++.+++..+|+.||+
T Consensus 239 ~a~~~l~~~~~~~--~~~l~ivG~~~~~g~~~~~~l~----~~~~~~~-------l~~~v~~~g~~~~~~~~~~l~~ad~ 305 (405)
T TIGR03449 239 RAVAELLDRDPDR--NLRVIVVGGPSGSGLATPDALI----ELAAELG-------IADRVRFLPPRPPEELVHVYRAADV 305 (405)
T ss_pred HHHHHHHhhCCCc--ceEEEEEeCCCCCcchHHHHHH----HHHHHcC-------CCceEEECCCCCHHHHHHHHHhCCE
Confidence 9999999988873 4778888865422113333333 3333332 2234566799999999999999999
Q ss_pred EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 441 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 441 ~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
+++||..||||++++|||+| |.|+|+|..+|..+.+.+ |++++|.|+++++++|.+++++++...+++.++
T Consensus 306 ~v~ps~~E~~g~~~lEAma~-----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~- 379 (405)
T TIGR03449 306 VAVPSYNESFGLVAMEAQAC-----GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAA- 379 (405)
T ss_pred EEECCCCCCcChHHHHHHHc-----CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-
Confidence 99999999999999999999 677899999888877743 899999999999999999998655444444333
Q ss_pred HHHHhhcC
Q psy775 518 RKREKHMN 525 (1460)
Q Consensus 518 ~~~v~~~~ 525 (1460)
++.+.+++
T Consensus 380 ~~~~~~fs 387 (405)
T TIGR03449 380 VEHAAGFS 387 (405)
T ss_pred HHHHHhCC
Confidence 44455555
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=230.41 Aligned_cols=261 Identities=11% Similarity=0.105 Sum_probs=180.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhcc-CCCceEEEEEec-----CCCCcccc-ccCCC---------------c-HHHHh
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQ-NLKFKLGFFLHI-----PFPPWDIF-RLFPW---------------S-DEILQ 267 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~-~~~~~IgfFlHi-----PFPs~eif-r~LP~---------------r-~eil~ 267 (1460)
..|+|-+||+|--++|.++.+..... ..++++.|.+|- -||...+- .-+|+ + ..+-.
T Consensus 610 ~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~ 689 (977)
T PLN02939 610 KPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKG 689 (977)
T ss_pred CCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHH
Confidence 46999999999999865554422111 135789999996 24422211 11221 1 11234
Q ss_pred hhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc---------------
Q psy775 268 GMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA--------------- 332 (1460)
Q Consensus 268 gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~--------------- 332 (1460)
|+..||.|-.-++.|++.-+. ..-.|++. .+..+..++.++|+|||++.|.+....
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-------~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~ 760 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-------TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKA 760 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHH-------HhccccCCceEEecceehhhcCCccccccccccChhhhhhhh
Confidence 677789988888988887654 11001110 123456788899999999988764211
Q ss_pred --chhhhc----c----CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHH
Q psy775 333 --APRVID----T----KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 402 (1460)
Q Consensus 333 --~~~~~~----~----~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~ 402 (1460)
...+++ . +.++|++|||+.+.||+..+++|+.++++ ++ +.|+++|.+. .+ .+++++..
T Consensus 761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGdGp---~~---~~e~eL~~ 828 (977)
T PLN02939 761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGSSP---VP---HIQREFEG 828 (977)
T ss_pred hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeCCC---cH---HHHHHHHH
Confidence 011111 1 35899999999999999999999998875 23 3466666331 11 23455555
Q ss_pred HHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc
Q psy775 403 LVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH 482 (1460)
Q Consensus 403 lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~ 482 (1460)
++.+.+.. +.+.|.+..+......+|++||+||+||.+|||||+++|||+| |.|+|++..+|..+.+.
T Consensus 829 La~~l~l~-------drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy-----GtPPVVs~vGGL~DtV~ 896 (977)
T PLN02939 829 IADQFQSN-------NNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY-----GSVPIVRKTGGLNDSVF 896 (977)
T ss_pred HHHHcCCC-------CeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC-----CCCEEEecCCCCcceee
Confidence 55554322 2244557888888889999999999999999999999999999 67889999999887662
Q ss_pred ------------ccEEECCCCHHHHHHHHHHHcC
Q psy775 483 ------------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 483 ------------~allVNP~D~~elA~AI~~aL~ 504 (1460)
.|++|+|.|+++++++|.+++.
T Consensus 897 d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 897 DFDDETIPVELRNGFTFLTPDEQGLNSALERAFN 930 (977)
T ss_pred cCCccccccCCCceEEecCCCHHHHHHHHHHHHH
Confidence 3899999999999999999876
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=221.11 Aligned_cols=273 Identities=18% Similarity=0.215 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccC-CCceEEEEEecCCCC----ccccccC--CC-
Q psy775 190 EFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQN-LKFKLGFFLHIPFPP----WDIFRLF--PW- 261 (1460)
Q Consensus 190 ~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~-~~~~IgfFlHiPFPs----~eifr~L--P~- 261 (1460)
.|+.++.+.+..+ ....|+|-+||+|--++|.++++.. ..+ .+.++.+..|-.-.. .+.+..+ |+
T Consensus 103 ~f~~~~~~~~~~~------~~~pDiiH~h~w~~~~~~~~l~~~~-~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~ 175 (466)
T PRK00654 103 FFSWAAAEFAEGL------DPRPDIVHAHDWHTGLIPALLKEKY-WRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAE 175 (466)
T ss_pred HHHHHHHHHHHhc------CCCCceEEECCcHHHHHHHHHHHhh-hccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChH
Confidence 4556665555422 1257999999999999999998653 112 257899999974211 0111111 10
Q ss_pred ------------cHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhh
Q psy775 262 ------------SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQL 329 (1460)
Q Consensus 262 ------------r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~ 329 (1460)
...+-.++..||.|---++.+++...+. ..|.... . .++.+..++.++|+|||.+.|.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~~gl~--~---~~~~~~~ki~vI~NGid~~~~~p~ 247 (466)
T PRK00654 176 AFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFGYGLE--G---LLRARSGKLSGILNGIDYDIWNPE 247 (466)
T ss_pred HcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCCcChH--H---HHHhcccCceEecCCCCccccCCc
Confidence 0112223444555554454444332210 0000000 0 001234578999999999988653
Q ss_pred hcc-----------------chhhhc------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC
Q psy775 330 AQA-----------------APRVID------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS 386 (1460)
Q Consensus 330 ~~~-----------------~~~~~~------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps 386 (1460)
... ...+++ .+.++|++|||+++.||++.+++|++++.++ + +.|+.+|.+
T Consensus 248 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g- 320 (466)
T PRK00654 248 TDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG- 320 (466)
T ss_pred cCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-
Confidence 210 011111 2567999999999999999999999998764 2 346666632
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCC
Q psy775 387 RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPP 466 (1460)
Q Consensus 387 r~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~ 466 (1460)
+ + .+++++++++.+.+. .+.++.+. +.+.+..+|++||++|+||.+||||++.+|||+| |
T Consensus 321 --~-~---~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-----G 380 (466)
T PRK00654 321 --D-P---ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-----G 380 (466)
T ss_pred --c-H---HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-----C
Confidence 1 1 234455555544432 24455454 6666778999999999999999999999999999 6
Q ss_pred CeEEEcCCCCchhccc---------ccEEECCCCHHHHHHHHHHHcC
Q psy775 467 GVLIVSPFAGAGEQMH---------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 467 GvlVlSe~aGaa~~L~---------~allVNP~D~~elA~AI~~aL~ 504 (1460)
.|+|+|..+|..+.+. .|++|+|.|+++++++|.++++
T Consensus 381 ~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 381 TLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALE 427 (466)
T ss_pred CCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 7889999999988773 3899999999999999999886
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-19 Score=210.75 Aligned_cols=278 Identities=19% Similarity=0.270 Sum_probs=193.3
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHH
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
.++|++|+..-. ...++ +..+..++.+.+|-.|.. +. + -.+|.|-+.+. +.+.++..
T Consensus 100 ~~vi~v~~~~~~--~~~~~----~~~~~~~~v~~~h~~~~~-~~----------~---~~~~~ii~~S~-~~~~~~~~-- 156 (380)
T PRK15484 100 DSVIVIHNSMKL--YRQIR----ERAPQAKLVMHMHNAFEP-EL----------L---DKNAKIIVPSQ-FLKKFYEE-- 156 (380)
T ss_pred CcEEEEeCcHHh--HHHHH----hhCCCCCEEEEEecccCh-hH----------h---ccCCEEEEcCH-HHHHHHHh--
Confidence 379999995422 12233 455677888999976521 11 1 13455545443 33333321
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.+ ...++.++|+|||.+.|.+... +.+++.+++
T Consensus 157 -~~---------------~~~~i~vIpngvd~~~~~~~~~--------------------------~~~~~~~~~----- 189 (380)
T PRK15484 157 -RL---------------PNADISIVPNGFCLETYQSNPQ--------------------------PNLRQQLNI----- 189 (380)
T ss_pred -hC---------------CCCCEEEecCCCCHHHcCCcch--------------------------HHHHHHhCC-----
Confidence 11 1124678999999877753110 122333332
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
..++++|+++||+.+.||+..+++|+.++.+++|++ .|+.+|.+......+...+.+++.+++.+
T Consensus 190 -----------~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~ 254 (380)
T PRK15484 190 -----------SPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKR 254 (380)
T ss_pred -----------CCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHh
Confidence 246789999999999999999999999999999974 68888876543322334566777777766
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 885 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l 885 (1460)
++.. +.+.|.++.+++..+|+.||++++||. .|||+++.+||||| +.|+|+|..+|..+.+
T Consensus 255 l~~~---------v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~-----G~PVI~s~~gg~~Eiv---- 316 (380)
T PRK15484 255 IGDR---------CIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAA-----GKPVLASTKGGITEFV---- 316 (380)
T ss_pred cCCc---------EEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHc-----CCCEEEeCCCCcHhhc----
Confidence 5433 567889999999999999999999997 49999999999999 7899999998877611
Q ss_pred hcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHH
Q psy775 886 ICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 965 (1460)
Q Consensus 886 ~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~e 965 (1460)
.++.+ |-++++|.|++++|++|.++++++..
T Consensus 317 -----------------------------------------~~~~~-------G~~l~~~~d~~~la~~I~~ll~d~~~- 347 (380)
T PRK15484 317 -----------------------------------------LEGIT-------GYHLAEPMTSDSIISDINRTLADPEL- 347 (380)
T ss_pred -----------------------------------------ccCCc-------eEEEeCCCCHHHHHHHHHHHHcCHHH-
Confidence 11111 22467899999999999999998764
Q ss_pred HHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 966 RTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 966 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++...++......++++..-++++.+.+.+.
T Consensus 348 ~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 348 TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 4454444444567889999999888887653
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-19 Score=228.84 Aligned_cols=286 Identities=16% Similarity=0.132 Sum_probs=189.8
Q ss_pred CCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccc-----------------cCCCcHHH-HhhhccCc
Q psy775 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR-----------------LFPWSDEI-LQGMLGCD 273 (1460)
Q Consensus 212 gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr-----------------~LP~r~ei-l~gLL~aD 273 (1460)
.|+|--|+..--.+...|++.+ +++..+..|.- ..+-++ .++.|-+. -..+-.||
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-----gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad 383 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-----NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASE 383 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-----CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcC
Confidence 6999999888888888888764 57888888852 011111 11222111 12345688
Q ss_pred eeeeccHHhHHHHHHHH-------HhhcCceecCCCcEEEECCe-EEEEEEeecccCchhhhhhhccc------------
Q psy775 274 MVGFHIEDYCLNFVDCC-------QRRLGCRVDRKNLLVEHGGR-TVRIRPLPIAIPYERFVQLAQAA------------ 333 (1460)
Q Consensus 274 lIgF~t~~yar~FL~~~-------~riLg~~~~~~~~~i~~~Gr-~vkV~viPiGID~~~f~~~~~~~------------ 333 (1460)
.|--.|......-...- .|+|.....+ .+..+|+ ..++.|+|+|||++.|.+.....
T Consensus 384 ~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~ 460 (1050)
T TIGR02468 384 IVITSTRQEIEEQWGLYDGFDVILERKLRARARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPA 460 (1050)
T ss_pred EEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccc
Confidence 88877776655332210 0111111100 1222332 33899999999999997642110
Q ss_pred -------hhhhc----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHH----HHHHH
Q psy775 334 -------PRVID----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY----QDLKE 398 (1460)
Q Consensus 334 -------~~~~~----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey----~~L~~ 398 (1460)
..+.+ +++++|++|||+++.||+..+|+||..+.+..+.. ++.+ ++|... +.++. .....
T Consensus 461 ~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~ 535 (1050)
T TIGR02468 461 KPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLT 535 (1050)
T ss_pred cccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHH
Confidence 01111 66789999999999999999999999987543321 2433 334221 11111 12334
Q ss_pred HHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 399 EMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 399 ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA----DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
++..++.+.+. ...+.|.|.+++++++++|+.| |+||+||++||||++++||||| |.|+|+|..
T Consensus 536 ~L~~li~~lgL-------~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc-----GlPVVASdv 603 (1050)
T TIGR02468 536 SVLKLIDKYDL-------YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPMVATKN 603 (1050)
T ss_pred HHHHHHHHhCC-------CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----CCCEEEeCC
Confidence 45555544432 2345667999999999999998 6999999999999999999999 677899999
Q ss_pred CCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 475 AGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 475 aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+|..+.+. .|++|+|.|++++|++|.++|+++...++++.++. +.+.+++
T Consensus 604 GG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr-~~v~~FS 656 (1050)
T TIGR02468 604 GGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGL-KNIHLFS 656 (1050)
T ss_pred CCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHCC
Confidence 88888774 39999999999999999999997766666655554 4456666
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=220.27 Aligned_cols=200 Identities=15% Similarity=0.229 Sum_probs=139.8
Q ss_pred EEEEEEeecccCchhhhhhhccc--hhh----hc----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q psy775 311 TVRIRPLPIAIPYERFVQLAQAA--PRV----ID----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL 380 (1460)
Q Consensus 311 ~vkV~viPiGID~~~f~~~~~~~--~~~----~~----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLv 380 (1460)
..++.++|+|||++.|.+..... ... .+ .++++|++|||+++.||+..+|+||.++.+..+. .++++
T Consensus 208 ~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~--~~l~l- 284 (439)
T TIGR02472 208 PERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEM--ANLVL- 284 (439)
T ss_pred ccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhh--ccEEE-
Confidence 45788999999999986542211 111 11 4577999999999999999999999864221111 12333
Q ss_pred EEEcC-CCCChHH-HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----cEEEEccCCCCCCcce
Q psy775 381 QIAVP-SRTDVKE-YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVA 454 (1460)
Q Consensus 381 qig~p-sr~~~~e-y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA----DV~VvpSlrEGfnLVa 454 (1460)
.+|.+ .+...+. ..++.+++..++.+++ ....+.|.|.++.+++..+|++| |+||+||.+||||+++
T Consensus 285 i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~-------l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~ 357 (439)
T TIGR02472 285 VLGCRDDIRKMESQQREVLQKVLLLIDRYD-------LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTL 357 (439)
T ss_pred EeCCccccccccHHHHHHHHHHHHHHHHcC-------CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHH
Confidence 23321 1111111 1122333444444432 23345677999999999999988 9999999999999999
Q ss_pred eeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 455 KEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 455 lEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+||||| |.|+|+|..+|..+.+.+ |++|+|.|++++|++|.++++++...+++..++......+++
T Consensus 358 lEAma~-----G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs 426 (439)
T TIGR02472 358 LEAAAC-----GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRHYS 426 (439)
T ss_pred HHHHHh-----CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 999999 677899999998887753 899999999999999999999766555555445444445555
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=220.64 Aligned_cols=272 Identities=19% Similarity=0.204 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCC----ccccccCCCc---
Q psy775 190 EFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP----WDIFRLFPWS--- 262 (1460)
Q Consensus 190 ~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs----~eifr~LP~r--- 262 (1460)
.|+.++.+.++.. ....|+|.+||+|-.++|.++++... ..+.++.+..|-..+. .+.+..+...
T Consensus 113 ~f~~a~~~~~~~~------~~~~DiiH~hdw~~~~~~~~l~~~~~--~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~ 184 (473)
T TIGR02095 113 FFSRAAAELLSGL------GWQPDVVHAHDWHTALVPALLKAVYR--PNPIKTVFTIHNLAYQGVFPADDFSELGLPPEY 184 (473)
T ss_pred HHHHHHHHHHHhc------CCCCCEEEECCcHHHHHHHHHHhhcc--CCCCCEEEEcCCCccCCcCCHHHHHHcCCChHH
Confidence 3555555554421 12479999999999999999987532 0137899999975421 1222211111
Q ss_pred ------------HHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhh
Q psy775 263 ------------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLA 330 (1460)
Q Consensus 263 ------------~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~ 330 (1460)
..+-.++..||.|-.-++.|++...+. ..|.... . .+..+..++.++|+|||.+.|.+..
T Consensus 185 ~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~~l~--~---~l~~~~~ki~~I~NGid~~~~~p~~ 256 (473)
T TIGR02095 185 FHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGYGLD--G---VLKARSGKLRGILNGIDTEVWNPAT 256 (473)
T ss_pred cCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCccch--h---HHHhcCCCeEEEeCCCCccccCCCC
Confidence 012224445555555555554433321 0000000 0 0011345788999999999886431
Q ss_pred cc-----------------chhhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC
Q psy775 331 QA-----------------APRVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS 386 (1460)
Q Consensus 331 ~~-----------------~~~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps 386 (1460)
.. ...+++ .++++|+++||+.+.||++.+++|++++.++. +.|+.+|.+.
T Consensus 257 ~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~ 330 (473)
T TIGR02095 257 DPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD 330 (473)
T ss_pred CcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC
Confidence 10 011111 26789999999999999999999999987642 4466666332
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCC
Q psy775 387 RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPP 466 (1460)
Q Consensus 387 r~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~ 466 (1460)
+ ++++++++++.+.+.+ +.+ .+..+.+++..+|++||++++||.+||||++++|||+| +
T Consensus 331 ----~---~~~~~l~~~~~~~~~~--------v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-----G 389 (473)
T TIGR02095 331 ----P---ELEEALRELAERYPGN--------VRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-----G 389 (473)
T ss_pred ----H---HHHHHHHHHHHHCCCc--------EEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-----C
Confidence 2 2345555555443221 333 35678888889999999999999999999999999999 6
Q ss_pred CeEEEcCCCCchhccc---------ccEEECCCCHHHHHHHHHHHcC
Q psy775 467 GVLIVSPFAGAGEQMH---------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 467 GvlVlSe~aGaa~~L~---------~allVNP~D~~elA~AI~~aL~ 504 (1460)
.|+|+|..+|..+.+. .|++++|.|+++++++|.+++.
T Consensus 390 ~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 390 TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALR 436 (473)
T ss_pred CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 7889999999998883 3899999999999999999987
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-19 Score=229.28 Aligned_cols=252 Identities=13% Similarity=0.109 Sum_probs=180.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhcc-CCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQ-NLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~-~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|-+||+|-.++|.++++..... -.+.++.+.+|-.- | .+..+-.++..||.|---++.|++..+..
T Consensus 709 ~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 709 HPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred CCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 46999999999999999998753211 12578999999421 1 12335567778999998888887765541
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc-----------------ch-hhhc------cCCeEEE
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA-----------------AP-RVID------TKQKIVL 345 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~-----------------~~-~~~~------~~~kvIL 345 (1460)
+ ....+.-++.++|+|||++.|.+.... .. .+++ .+.++|+
T Consensus 780 -----~----------~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg 844 (1036)
T PLN02316 780 -----S----------AIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVG 844 (1036)
T ss_pred -----c----------CcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEE
Confidence 0 011234578899999999877543110 01 1111 2568999
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 425 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~ 425 (1460)
+||||.+.||+..+++|+.++++. + +.|+++|.+. + ..+++++.+++.+++..+. .-+.|.+.
T Consensus 845 ~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~Gp--d----~~~e~~l~~La~~Lg~~~~-----~rV~f~g~ 907 (1036)
T PLN02316 845 IITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSAP--D----PRIQNDFVNLANQLHSSHH-----DRARLCLT 907 (1036)
T ss_pred EEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCCC--C----HHHHHHHHHHHHHhCccCC-----CeEEEEec
Confidence 999999999999999999999863 2 3455555331 1 1345566666666654321 12333455
Q ss_pred CCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc----------------ccEEECC
Q psy775 426 ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH----------------EALICNP 489 (1460)
Q Consensus 426 v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~----------------~allVNP 489 (1460)
.+......+|++||+||+||.+|||||+.+|||+| |.|+|+|..+|..+.+. .|++|+|
T Consensus 908 ~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-----GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 908 YDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-----GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred CCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-----CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 55544457999999999999999999999999999 66789999999998872 3899999
Q ss_pred CCHHHHHHHHHHHcCCCHH
Q psy775 490 YEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 490 ~D~~elA~AI~~aL~m~~~ 508 (1460)
.|++++++||.++|.....
T Consensus 983 ~d~~aLa~AL~raL~~~~~ 1001 (1036)
T PLN02316 983 ADAAGVDYALNRAISAWYD 1001 (1036)
T ss_pred CCHHHHHHHHHHHHhhhhh
Confidence 9999999999999986533
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=212.76 Aligned_cols=272 Identities=18% Similarity=0.182 Sum_probs=178.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCC--ccc-cc-cCCCc--------HH---HHhhhccCcee
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP--WDI-FR-LFPWS--------DE---ILQGMLGCDMV 275 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs--~ei-fr-~LP~r--------~e---il~gLL~aDlI 275 (1460)
..|+|..| +.+....++++.+| ++++..++|..+-. .+. |. ..+.+ .. ....+-.||.+
T Consensus 87 ~pdvi~~h--~~~~~~~~l~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 87 RPDVIVAH--PGWGETLFLKDVWP----DAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred CCCEEEEC--CccchhhhHHHhCC----CCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 46999999 55666677887766 67777776643311 110 11 11111 11 12344556665
Q ss_pred eeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-----ccCCeEEEEecC-
Q psy775 276 GFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-----DTKQKIVLGVDR- 349 (1460)
Q Consensus 276 gF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-----~~~~kvIL~VgR- 349 (1460)
-..+......|.+ .+ ..++.++|+|||.+.|.+......... ..++++|+++||
T Consensus 161 i~~s~~~~~~~~~-----------------~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 161 VSPTRWQRSTFPA-----------------EL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred ECCCHHHHhhCcH-----------------hh---ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCC
Confidence 5555433322211 01 146889999999998875432211111 146788999998
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCC--CChHH-HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC
Q psy775 350 LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSR--TDVKE-YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCI 426 (1460)
Q Consensus 350 Ld~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr--~~~~e-y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v 426 (1460)
+.+.||+..+++|+.++.+++|+++ |+.+|.... +..+. ..+++++ +..+++.+.+ . +.+.|.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~-~~V~f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---L-SRVHFLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---c-ceEEEeCCC
Confidence 9999999999999999998888764 666664321 11000 0112222 1222222211 1 234566999
Q ss_pred CHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc
Q psy775 427 SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL 503 (1460)
Q Consensus 427 ~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL 503 (1460)
+++++.++|+.||++++||..||+|++++||||| |.|+|+|..+|..+.+.+ |++++|.|++++|++|.+++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-----G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll 364 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-----GCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELL 364 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-----CCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 677899999888888753 89999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhh-cC
Q psy775 504 TMPEDERTLRMNYLRKREKH-MN 525 (1460)
Q Consensus 504 ~m~~~er~~R~~~l~~~v~~-~~ 525 (1460)
+++...++++.++ ++.+.+ ++
T Consensus 365 ~~~~~~~~l~~~a-r~~~~~~fs 386 (396)
T cd03818 365 DDPARRARLRRAA-RRTALRYDL 386 (396)
T ss_pred hCHHHHHHHHHHH-HHHHHHhcc
Confidence 9876555555444 444444 44
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=222.49 Aligned_cols=281 Identities=11% Similarity=0.125 Sum_probs=185.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhcc--CCCceEEEEEecCC-----CC
Q psy775 180 HWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ--NLKFKLGFFLHIPF-----PP 252 (1460)
Q Consensus 180 ~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~--~~~~~IgfFlHiPF-----Ps 252 (1460)
..+.|.-++++.++.+.+. . -..|+|-+||+|--++|.+++++.... ..++++.+..|... |.
T Consensus 120 ~~~rf~~f~~a~l~~~~~~-~---------~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~ 189 (489)
T PRK14098 120 SAEKVIFFNVGVLETLQRL-G---------WKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPF 189 (489)
T ss_pred HHHHHHHHHHHHHHHHHhc-C---------CCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCH
Confidence 3456665566665554321 0 136999999999999999998754211 12689999999732 21
Q ss_pred ccccccCCCc------------HHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecc
Q psy775 253 WDIFRLFPWS------------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIA 320 (1460)
Q Consensus 253 ~eifr~LP~r------------~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiG 320 (1460)
...-..+|+. .-+-.++..||.|---++.|++.-.+....-.|++. ....+..++.++|+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~-------~l~~~~~kl~~I~NG 262 (489)
T PRK14098 190 KVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK-------VLEERKMRLHGILNG 262 (489)
T ss_pred HHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH-------HHHhcCCCeeEEeCC
Confidence 1111113311 122335556666666666665543220000001100 001135678899999
Q ss_pred cCchhhhhhhccc----------------h-hhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCc
Q psy775 321 IPYERFVQLAQAA----------------P-RVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376 (1460)
Q Consensus 321 ID~~~f~~~~~~~----------------~-~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~k 376 (1460)
||++.|.+..... + .+.+ .+.++|++|||+.+.||+..+++|+.++.+. +
T Consensus 263 ID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~---- 336 (489)
T PRK14098 263 IDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D---- 336 (489)
T ss_pred ccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----
Confidence 9999886532110 0 1111 3567999999999999999999999998752 2
Q ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceee
Q psy775 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKE 456 (1460)
Q Consensus 377 vvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValE 456 (1460)
+.|+++|.+ +. .+++++++++.+...+ +.+.+.++.+++..+|++||+||+||.+||||++.+|
T Consensus 337 ~~lvivG~G---~~----~~~~~l~~l~~~~~~~---------V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lE 400 (489)
T PRK14098 337 IQLVICGSG---DK----EYEKRFQDFAEEHPEQ---------VSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMF 400 (489)
T ss_pred cEEEEEeCC---CH----HHHHHHHHHHHHCCCC---------EEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHH
Confidence 457766632 11 2344555555443221 3455788999999999999999999999999999999
Q ss_pred eeeeccCCCCCeEEEcCCCCchhccc-------ccEEECCCCHHHHHHHHHHHcC
Q psy775 457 FVACQINEPPGVLIVSPFAGAGEQMH-------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 457 amAcq~~~~~GvlVlSe~aGaa~~L~-------~allVNP~D~~elA~AI~~aL~ 504 (1460)
||+| |.|+|++..+|..+.+. .|++++|.|+++++++|.+++.
T Consensus 401 Ama~-----G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 401 AMSY-----GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHhC-----CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHH
Confidence 9999 66789999999887763 3899999999999999999864
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-18 Score=199.26 Aligned_cols=274 Identities=22% Similarity=0.239 Sum_probs=188.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCC------c-HHHHhhhccCceeeeccHHhH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPW------S-DEILQGMLGCDMVGFHIEDYC 283 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~------r-~eil~gLL~aDlIgF~t~~ya 283 (1460)
..|+|-+|++....++..+.+.. +.++.+..|.............+ + ..-...+..+|.+.+.+....
T Consensus 101 ~~Div~~~~~~~~~~~~~~~~~~-----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 175 (398)
T cd03800 101 RPDLIHAHYWDSGLVALLLARRL-----GIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEA 175 (398)
T ss_pred CccEEEEecCccchHHHHHHhhc-----CCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHH
Confidence 46999999888777776665432 57788888865432111100001 0 111223446898888888766
Q ss_pred HHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch--hhh--ccCCeEEEEecCccccCCHHHH
Q psy775 284 LNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP--RVI--DTKQKIVLGVDRLDYTKGLVHR 359 (1460)
Q Consensus 284 r~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~--~~~--~~~~kvIL~VgRLd~~KGI~~l 359 (1460)
..+.+. +.....++.++|+|+|.+.|.+...... ... ..++++|+++||+++.||+..+
T Consensus 176 ~~~~~~-----------------~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 176 EELYSL-----------------YGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred HHHHHH-----------------ccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHH
Confidence 655541 1112234788999999887754322111 111 1567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q psy775 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAA 439 (1460)
Q Consensus 360 L~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aAD 439 (1460)
++|+.++.+++|++ .++.+|.......+. ...+++.++.+.+. .+-+.+.|.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~----~l~i~G~~~~~~~~~---~~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERA----NLVIVGGPRDDILAM---DEEELRELARELGV-------IDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCe----EEEEEECCCCcchhh---hhHHHHHHHHhcCC-------CceEEEeccCCHHHHHHHHHhCC
Confidence 99999998887764 477777544332222 22234444443322 23355679999999999999999
Q ss_pred EEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 440 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 440 V~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
++++||..||||++++||||| |.|+|+|+.+|..+.+.. |++++|.|+++++++|.++++++...+++..++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~-----G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a 379 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMAC-----GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAG 379 (398)
T ss_pred EEEecccccccCcHHHHHHhc-----CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999999999999999999 667799999998887743 899999999999999999998765555555444
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
.....++++
T Consensus 380 ~~~~~~~~s 388 (398)
T cd03800 380 LRRARARYT 388 (398)
T ss_pred HHHHHHhCC
Confidence 443335555
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=209.20 Aligned_cols=262 Identities=16% Similarity=0.197 Sum_probs=176.8
Q ss_pred CCCEEEEeCcchhHH-HHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHh-hhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLA-ANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQ-GMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~ll-P~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~-gLL~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|-+|+++-.+. ...+-.+ ..+.++.+..|-.|+..+.... +...+.+ .+-.+|.+-+.+....+.+..
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~----~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 161 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHAR----TMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVL 161 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhh----hcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHH
Confidence 479999999764433 2333222 1257889999976653221110 1111212 233567777776655544322
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
. .+....++.++|+|+|.+.|.+.... ...++++++++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------------~~~~~~k~~vi~ngvd~~~f~~~~~~----~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~ 220 (398)
T cd03796 162 R-----------------ASLDPERVSVIPNAVDSSDFTPDPSK----RDNDKITIVVISRLVYRKGIDLLVGIIPEICK 220 (398)
T ss_pred H-----------------hCCChhhEEEEcCccCHHHcCCCccc----CCCCceEEEEEeccchhcCHHHHHHHHHHHHh
Confidence 1 11123567889999999888643211 12467899999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++|++ .|+.+|. ++..+.+++. +.+.+ ....+.+.|.++.+++..+|+.||++++||..|
T Consensus 221 ~~~~~----~l~i~G~-----g~~~~~l~~~----~~~~~-------l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E 280 (398)
T cd03796 221 KHPNV----RFIIGGD-----GPKRILLEEM----REKYN-------LQDRVELLGAVPHERVRDVLVQGHIFLNTSLTE 280 (398)
T ss_pred hCCCE----EEEEEeC-----CchHHHHHHH----HHHhC-------CCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhh
Confidence 88875 4666663 2333334433 33322 123345569999999999999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|||++.+||||| |.|+|+|..+|..+.+.+ +++++| |.++++++|.++++++.+.+....+...+...+++
T Consensus 281 ~~g~~~~EAma~-----G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs 353 (398)
T cd03796 281 AFCIAIVEAASC-----GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYS 353 (398)
T ss_pred ccCHHHHHHHHc-----CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCC
Confidence 999999999999 677899999988887744 455555 99999999999999766554444444444444455
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.6e-19 Score=215.43 Aligned_cols=265 Identities=20% Similarity=0.222 Sum_probs=166.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC-----CCCcccccc--CCCc-------------HHHHhhhc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-----FPPWDIFRL--FPWS-------------DEILQGML 270 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP-----FPs~eifr~--LP~r-------------~eil~gLL 270 (1460)
..|+|-+||+|--++|.+|+.+. ..+.++.+..|-- ||. ..+.. +|.. ..+-.++.
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~---~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSG---RPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCC---CCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 46999999999999999997421 2357899999953 221 11111 1110 01222333
Q ss_pred cCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-----------------
Q psy775 271 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA----------------- 333 (1460)
Q Consensus 271 ~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~----------------- 333 (1460)
.||.|---++.|++...+.- .-.|.+. .+..+..++.++|+|||++.|.+.....
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~-------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k 280 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG-------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANK 280 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH-------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhH
Confidence 34444433443333222100 0000000 0011345789999999999886532210
Q ss_pred hhhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q psy775 334 PRVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 406 (1460)
Q Consensus 334 ~~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~ 406 (1460)
..+++ .+.+++++|||+++.||+..+++|+.+++++ + +.|+++|.+ + + ++++++++++.+
T Consensus 281 ~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G---~-~---~~~~~l~~l~~~ 347 (485)
T PRK14099 281 AALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSG---D-A---ELEARFRAAAQA 347 (485)
T ss_pred HHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecC---C-H---HHHHHHHHHHHH
Confidence 11111 2356888999999999999999999998753 2 346666632 1 1 234445555443
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHH-HhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---
Q psy775 407 INGRFTTPNWSPIRYIYGCISQDELASFY-RDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--- 482 (1460)
Q Consensus 407 IN~~fg~~~~~pIv~~~g~v~~eeL~aLY-~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--- 482 (1460)
... .++++.|. ++++..+| ++||+||+||.+||||++.+|||+| |+++|+|..+|..+.+.
T Consensus 348 ~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-----G~ppVvs~~GGl~d~V~~~~ 412 (485)
T PRK14099 348 YPG--------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-----GAVPVVARVGGLADTVVDAN 412 (485)
T ss_pred CCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-----CCCcEEeCCCCccceeeccc
Confidence 221 24455675 67888877 5699999999999999999999999 56778999999888662
Q ss_pred ---------ccEEECCCCHHHHHHHHHHH---cCCCHHHHHHHHH
Q psy775 483 ---------EALICNPYEIDAAAEVIHRA---LTMPEDERTLRMN 515 (1460)
Q Consensus 483 ---------~allVNP~D~~elA~AI~~a---L~m~~~er~~R~~ 515 (1460)
.|++|+|.|+++++++|.++ ++++...++++.+
T Consensus 413 ~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~ 457 (485)
T PRK14099 413 EMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRN 457 (485)
T ss_pred ccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 38999999999999999984 4444433333333
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.6e-19 Score=208.56 Aligned_cols=284 Identities=20% Similarity=0.205 Sum_probs=182.1
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHH
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
.|+|++|+++...++...+ ....++.++.|.++..+. . ...+.+.+.+..+|.+.+.+.++++.+
T Consensus 86 ~Dvv~~h~~~~~~~~~~~~------~~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d~~i~~~~~~~~~~----- 150 (372)
T cd03792 86 ADVVVIHDPQPLALPLFKK------KRGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYDAAVFHLPEYVPPQ----- 150 (372)
T ss_pred CCEEEECCCCchhHHHhhh------cCCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCCEEeecHHHhcCCC-----
Confidence 3899999999665544332 225678889998764321 0 111223334445777766653332110
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
+..+ ++ ++|+|||+...... ... .+..+.+|+.++++
T Consensus 151 ---------------~~~~--~~-vipngvd~~~~~~~--~~~-------------------~~~~~~~~~~~~~~---- 187 (372)
T cd03792 151 ---------------VPPR--KV-IIPPSIDPLSGKNR--ELS-------------------PADIEYILEKYGID---- 187 (372)
T ss_pred ---------------CCCc--eE-EeCCCCCCCccccC--CCC-------------------HHHHHHHHHHhCCC----
Confidence 1122 23 89999997532110 000 01113445444432
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
.++++|+++||+++.||+..+++||+.+.+++|++ .|+.+|.+...+ +++.++.++ +.++
T Consensus 188 ------------~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~---~~~~ 247 (372)
T cd03792 188 ------------PERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEE---VLEY 247 (372)
T ss_pred ------------CCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHH---HHHH
Confidence 57889999999999999999999999998887874 677778664322 222232222 2222
Q ss_pred HhccCCCCCCccEEEEcCC-CCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 885 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~-v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l 885 (1460)
.+.. ..++++... ++.+++.++|++||+++.||.+||||++++||||| +.|+|+|..+|..+.+
T Consensus 248 ~~~~------~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-----G~Pvv~s~~~~~~~~i---- 312 (372)
T cd03792 248 AEGD------PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-----GKPVIAGPVGGIPLQI---- 312 (372)
T ss_pred hCCC------CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-----CCCEEEcCCCCchhhc----
Confidence 2211 124444332 48999999999999999999999999999999999 7899999988876611
Q ss_pred hcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHH
Q psy775 886 ICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 965 (1460)
Q Consensus 886 ~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~e 965 (1460)
.++ ..+++++ +.+++|++|.+++++++..
T Consensus 313 -----------------------------------------~~~--------~~g~~~~--~~~~~a~~i~~ll~~~~~~ 341 (372)
T cd03792 313 -----------------------------------------EDG--------ETGFLVD--TVEEAAVRILYLLRDPELR 341 (372)
T ss_pred -----------------------------------------ccC--------CceEEeC--CcHHHHHHHHHHHcCHHHH
Confidence 111 2346776 4678899999999875544
Q ss_pred HHHHHHHHHhHH-HhcCHHHHHHHHHHHHhh
Q psy775 966 RTLRMNYLRKRE-KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 966 r~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 995 (1460)
++++.+ .++++ .+++++..++++++.+++
T Consensus 342 ~~~~~~-a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 342 RKMGAN-AREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHH-HHHHHHHHcCHHHHHHHHHHHHHh
Confidence 444444 35554 678999999988877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=209.32 Aligned_cols=261 Identities=16% Similarity=0.161 Sum_probs=178.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcccccc--CC-CcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL--FP-WSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~--LP-~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
+-|+|-.|..+.-.+..++++. + ..+.++.+.+|-+ +++.. .. .+..+-+-+-.||.|-..+....+.+.
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~-~--~~~~~~~~t~Hg~----d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~ 190 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLREL-G--VLRGKIATIFHGI----DISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQ 190 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHh-C--CCCCCeEEEEccc----ccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 5799999987776677777652 1 1234567788843 22211 11 112233333457877766654433332
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
+ +| ....++.++|+|||.+.|.+.... ...+...|++|||+.+.||+..+++|++++.
T Consensus 191 ~-----~g-------------~~~~ki~vi~nGvd~~~f~~~~~~----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~ 248 (406)
T PRK15427 191 K-----MG-------------CPPEKIAVSRMGVDMTRFSPRPVK----APATPLEIISVARLTEKKGLHVAIEACRQLK 248 (406)
T ss_pred H-----cC-------------CCHHHEEEcCCCCCHHHcCCCccc----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHH
Confidence 2 11 123467789999999988542111 0124456899999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|++ .++.+|. ++.. +++++++.+.+ ....+.+.|.++++++..+|+.||++|+||..
T Consensus 249 ~~~~~~----~l~ivG~-----G~~~----~~l~~~~~~~~-------l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~ 308 (406)
T PRK15427 249 EQGVAF----RYRILGI-----GPWE----RRLRTLIEQYQ-------LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVT 308 (406)
T ss_pred hhCCCE----EEEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEeCCCCHHHHHHHHHhCCEEEECCcc
Confidence 888764 4665653 3333 33444444432 23456778999999999999999999999984
Q ss_pred ------CCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy775 448 ------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518 (1460)
Q Consensus 448 ------EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~ 518 (1460)
|||+++.+||||| |.|+|+|..+|..+.+. .|++|+|.|++++|++|.+++++++++++...+..+
T Consensus 309 ~~~g~~Eg~p~~llEAma~-----G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 309 GADGDMEGIPVALMEAMAV-----GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred CCCCCccCccHHHHHHHhC-----CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999 67789999999888874 389999999999999999999955554443334444
Q ss_pred HHH-hhcC
Q psy775 519 KRE-KHMN 525 (1460)
Q Consensus 519 ~~v-~~~~ 525 (1460)
+.+ .+++
T Consensus 384 ~~v~~~f~ 391 (406)
T PRK15427 384 EKVETDFN 391 (406)
T ss_pred HHHHHhcC
Confidence 444 4444
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-18 Score=202.98 Aligned_cols=271 Identities=17% Similarity=0.177 Sum_probs=181.3
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcccc-----ccCCCcHH-HHhhhccCceeeeccHHhHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIF-----RLFPWSDE-ILQGMLGCDMVGFHIEDYCL 284 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eif-----r~LP~r~e-il~gLL~aDlIgF~t~~yar 284 (1460)
..|+|.+|++...+.+.++++. .+.++.+.+|-.+|..... ........ ....+..+|.|-..+....+
T Consensus 83 ~~divh~~~~~~~~~~~~~~~~-----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 157 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKKL-----YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMRE 157 (388)
T ss_pred CCCeEeecchhhhhHHHHHHHh-----cCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHH
Confidence 3699999998876666555432 2577888999765432110 00000111 12233456777666665555
Q ss_pred HHHHHHHhhcCceecCCCcEEEE-CCeEEEEEEeecccCchhhhhhhccchh-hhc--cCCeEEEEecCccccCCHHHHH
Q psy775 285 NFVDCCQRRLGCRVDRKNLLVEH-GGRTVRIRPLPIAIPYERFVQLAQAAPR-VID--TKQKIVLGVDRLDYTKGLVHRL 360 (1460)
Q Consensus 285 ~FL~~~~riLg~~~~~~~~~i~~-~Gr~vkV~viPiGID~~~f~~~~~~~~~-~~~--~~~kvIL~VgRLd~~KGI~~lL 360 (1460)
.+.+. + +-...++.++|+|+|.+.+.+......+ ... .++++++++||+.+.||+..++
T Consensus 158 ~~~~~-----------------~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li 220 (388)
T TIGR02149 158 DILKY-----------------YPDLDPEKVHVIYNGIDTKEYKPDDGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLL 220 (388)
T ss_pred HHHHH-----------------cCCCCcceEEEecCCCChhhcCCCchHHHHHHhCCCCCceEEEEEcccccccCHHHHH
Confidence 54431 1 1123467889999999887643211111 111 4567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccE
Q psy775 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 440 (1460)
Q Consensus 361 ~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV 440 (1460)
+|+.++. ++. .++.++.+. +.+ ++.+++.+.+...+... ..++++.+.++.+++..+|+.||+
T Consensus 221 ~a~~~l~---~~~----~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aDv 283 (388)
T TIGR02149 221 DAVHYIP---KDV----QVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAEV 283 (388)
T ss_pred HHHHHHh---hcC----cEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCCE
Confidence 9999873 232 344444321 112 23344444444443321 236777789999999999999999
Q ss_pred EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCH------HHHHHHHHHHcCCCHHHHH
Q psy775 441 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEI------DAAAEVIHRALTMPEDERT 511 (1460)
Q Consensus 441 ~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~------~elA~AI~~aL~m~~~er~ 511 (1460)
+|+||..||||++++|||+| |.|+|+|..+|..+.+.+ |++++|.|. ++++++|.++++.++..++
T Consensus 284 ~v~ps~~e~~g~~~lEA~a~-----G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~ 358 (388)
T TIGR02149 284 FVCPSIYEPLGIVNLEAMAC-----GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKK 358 (388)
T ss_pred EEeCCccCCCChHHHHHHHc-----CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHH
Confidence 99999999999999999999 677899999888877743 899999998 9999999999987665555
Q ss_pred HHHHHHHHHHhhcC
Q psy775 512 LRMNYLRKREKHMN 525 (1460)
Q Consensus 512 ~R~~~l~~~v~~~~ 525 (1460)
++.++.+....+++
T Consensus 359 ~~~~a~~~~~~~~s 372 (388)
T TIGR02149 359 MGIAGRKRAEEEFS 372 (388)
T ss_pred HHHHHHHHHHHhCC
Confidence 55555555555666
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-18 Score=201.61 Aligned_cols=192 Identities=17% Similarity=0.249 Sum_probs=143.5
Q ss_pred EEEEEEeecccCchhhhhhhccchhhh-c----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcC
Q psy775 311 TVRIRPLPIAIPYERFVQLAQAAPRVI-D----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 385 (1460)
Q Consensus 311 ~vkV~viPiGID~~~f~~~~~~~~~~~-~----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~p 385 (1460)
..++.++|+|||.+.|.+......... + .++.+|+++||+++.||+..+++|+..+.+++|+...++.|+.+|.+
T Consensus 159 ~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g 238 (374)
T TIGR03088 159 PAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG 238 (374)
T ss_pred hhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCC
Confidence 356788999999988764322111111 1 45779999999999999999999999999998876566788877733
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCC
Q psy775 386 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEP 465 (1460)
Q Consensus 386 sr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~ 465 (1460)
+...++ ++.+.+.+ ....+++.|. .+++..+|+.||++++||..||||++++|||+|
T Consensus 239 -----~~~~~~----~~~~~~~~-------~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~----- 295 (374)
T TIGR03088 239 -----PARGAC----EQMVRAAG-------LAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS----- 295 (374)
T ss_pred -----chHHHH----HHHHHHcC-------CcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-----
Confidence 222233 33333322 2345667774 578899999999999999999999999999999
Q ss_pred CCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 466 PGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 466 ~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|.|+|+|..+|..+.+.+ |++++|.|++++|++|.++++++...+.++.++......+++
T Consensus 296 G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 296 GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 677899999888888743 899999999999999999998665554444444443445555
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-18 Score=206.48 Aligned_cols=192 Identities=19% Similarity=0.217 Sum_probs=144.2
Q ss_pred EEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCC-CcEEEEEEEcCCCCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL-EKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~-~kvvLvqig~psr~~~~ 391 (1460)
++.++|+|+|.+.|.+... ....++++|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.......
T Consensus 213 ~~~vi~~gvd~~~~~~~~~----~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~- 287 (419)
T cd03806 213 KPSIVYPPCDVEELLKLPL----DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDD- 287 (419)
T ss_pred CcEEEcCCCCHHHhccccc----ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCccc-
Confidence 6778999999988754321 012356789999999999999999999999999887621 2466777775322211
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
.++.+++++++.+.+. ...+.|.|.++.+++..+|+.||+++.||..||||++++||||| |.|+|+
T Consensus 288 --~~~~~~L~~~~~~l~l-------~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-----G~pvIa 353 (419)
T cd03806 288 --EKRVEDLKLLAKELGL-------EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-----GLIPLA 353 (419)
T ss_pred --HHHHHHHHHHHHHhCC-------CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-----CCcEEE
Confidence 2234455555555432 23356679999999999999999999999999999999999999 677899
Q ss_pred cCCCCchh-ccc----c--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 472 SPFAGAGE-QMH----E--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 472 Se~aGaa~-~L~----~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|..+|..+ .+. + |++++ |++++|++|.+++++++++++...++.++...+++
T Consensus 354 ~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs 412 (419)
T cd03806 354 HASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFS 412 (419)
T ss_pred EcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC
Confidence 99877654 443 3 88874 99999999999999988777665555555555555
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-18 Score=213.72 Aligned_cols=317 Identities=15% Similarity=0.176 Sum_probs=186.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC----CCCc
Q psy775 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP----FPPW 253 (1460)
Q Consensus 178 ~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP----FPs~ 253 (1460)
.+-|..-.++++..++.+.... ....|+|--|...=-+++..|++++ +++..+..|.= .+.+
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~---------~~~PDlIHaHYwdsg~vA~~La~~l-----gVP~v~T~HsL~k~K~~~~ 449 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAEL---------QGKPDLIIGNYSDGNLVASLLAHKL-----GVTQCTIAHALEKTKYPDS 449 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCCCCEEEECCccHHHHHHHHHHHh-----CCCEEEEcccchhhhcccc
Confidence 4567777777777766654321 1246999999444447777777764 47888888831 1111
Q ss_pred cc--------cccC-CCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc--eecCCCcEEEECC---eEEEEEEeec
Q psy775 254 DI--------FRLF-PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC--RVDRKNLLVEHGG---RTVRIRPLPI 319 (1460)
Q Consensus 254 ei--------fr~L-P~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~--~~~~~~~~i~~~G---r~vkV~viPi 319 (1460)
++ |+.. -...|.+ .|-.||.|--.|+.-....-....+ +++ .....++...++| ...++.++|+
T Consensus 450 ~~~~~~~e~~y~~~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i~q-y~sh~~f~~p~L~rvv~GId~~~~ki~VVpp 527 (815)
T PLN00142 450 DIYWKKFDDKYHFSCQFTADLI-AMNHADFIITSTYQEIAGSKDTVGQ-YESHTAFTLPGLYRVVHGIDVFDPKFNIVSP 527 (815)
T ss_pred CCcccccchhhhhhhchHHHHH-HHHhhhHHHhCcHHHHhcccchhhh-hhcccccccchhhhhhccccccccCeeEECC
Confidence 11 1100 0011111 3334554443332211100000000 000 0000000000011 1237889999
Q ss_pred ccCchhhhhhhccchh--------------------hh----ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCC
Q psy775 320 AIPYERFVQLAQAAPR--------------------VI----DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLE 375 (1460)
Q Consensus 320 GID~~~f~~~~~~~~~--------------------~~----~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~ 375 (1460)
|+|...|.+......+ .. ..++++|++|||+++.||+..+++||.++.+..++
T Consensus 528 GvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~--- 604 (815)
T PLN00142 528 GADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL--- 604 (815)
T ss_pred CCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC---
Confidence 9999988643211111 01 14567999999999999999999999988666554
Q ss_pred cEEEEEEEcC-CCC--ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEc---CCCCHHHHHHHHH-hccEEEEccCCC
Q psy775 376 KVTLLQIAVP-SRT--DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY---GCISQDELASFYR-DAAVALVTPLRD 448 (1460)
Q Consensus 376 kvvLvqig~p-sr~--~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~---g~v~~eeL~aLY~-aADV~VvpSlrE 448 (1460)
+.|+++|.+ ... ...+..+..+++.+++.+.+.. ..|.++. +..+.++++.+|+ ++|+||+||.+|
T Consensus 605 -~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~------~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~E 677 (815)
T PLN00142 605 -VNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK------GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYE 677 (815)
T ss_pred -cEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC------CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCccc
Confidence 457777754 111 1111222224455555554422 1233331 2456678888777 579999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL----TMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL----~m~~~er~~R~~~l~~~v 521 (1460)
|||++++||||| |.|+|+|..+|..+.+.+ |++|+|.|++++|++|.+++ +++...+++..+++++..
T Consensus 678 gFGLvvLEAMA~-----GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~ 752 (815)
T PLN00142 678 AFGLTVVEAMTC-----GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIY 752 (815)
T ss_pred CCCHHHHHHHHc-----CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 999999999999 677899999999888843 99999999999999998754 555555555555555555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
++++
T Consensus 753 e~FS 756 (815)
T PLN00142 753 ECYT 756 (815)
T ss_pred HhCC
Confidence 6666
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=205.12 Aligned_cols=260 Identities=18% Similarity=0.221 Sum_probs=171.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHH----HHhh-hccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDE----ILQG-MLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~e----il~g-LL~aDlIgF~t~~yar~ 285 (1460)
..|+|.+|+...+.++.++-.+. .+.++.+.+|.-+|...-....++... +.+. ...+|.|...+....+.
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~----~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~ 219 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKL----LCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKE 219 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHH----hCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 47999999877666555543222 146777777764443211001111000 0111 12366666666655544
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch---hhh--ccCCeEEEEecCccccCCHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP---RVI--DTKQKIVLGVDRLDYTKGLVHRL 360 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~---~~~--~~~~kvIL~VgRLd~~KGI~~lL 360 (1460)
+.+. + .....++.++|+|||.+.|.+...... ... ..++++|+++||+.+.||+..++
T Consensus 220 l~~~-----~------------~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li 282 (465)
T PLN02871 220 LEAA-----G------------VTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLK 282 (465)
T ss_pred HHHc-----C------------CCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHH
Confidence 4331 0 011246788999999998865322111 111 13678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccE
Q psy775 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 440 (1460)
Q Consensus 361 ~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV 440 (1460)
+|++++ |++ .|+++|. ++.. +++++++... +| .|.|.++++++..+|+.||+
T Consensus 283 ~a~~~~----~~~----~l~ivG~-----G~~~----~~l~~~~~~~----------~V-~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 283 RVMERL----PGA----RLAFVGD-----GPYR----EELEKMFAGT----------PT-VFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred HHHHhC----CCc----EEEEEeC-----ChHH----HHHHHHhccC----------Ce-EEeccCCHHHHHHHHHHCCE
Confidence 988654 554 4666662 3333 3333333221 23 45699999999999999999
Q ss_pred EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc------cEEECCCCHHHHHHHHHHHcCCCHHHHHHHH
Q psy775 441 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE------ALICNPYEIDAAAEVIHRALTMPEDERTLRM 514 (1460)
Q Consensus 441 ~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~------allVNP~D~~elA~AI~~aL~m~~~er~~R~ 514 (1460)
+|+||..||||++++||||| |.|+|+|..+|..+.+.+ |++++|.|++++|++|.++++++...++++.
T Consensus 335 ~V~pS~~E~~g~~vlEAmA~-----G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~ 409 (465)
T PLN02871 335 FVMPSESETLGFVVLEAMAS-----GVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGA 409 (465)
T ss_pred EEECCcccccCcHHHHHHHc-----CCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999999999999999999 677899999888777632 8999999999999999999986654444443
Q ss_pred HHHHHHHhhcC
Q psy775 515 NYLRKREKHMN 525 (1460)
Q Consensus 515 ~~l~~~v~~~~ 525 (1460)
..++.+.+++
T Consensus 410 -~a~~~~~~fs 419 (465)
T PLN02871 410 -AAREEVEKWD 419 (465)
T ss_pred -HHHHHHHhCC
Confidence 3445566666
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.2e-18 Score=195.83 Aligned_cols=257 Identities=14% Similarity=0.070 Sum_probs=171.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHH-HhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEI-LQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~ei-l~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
+.|+|.+|..+...++.++.+..+ ...+.+..|..+...+.+........+ ...+..+|.+-..+....+.+..
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~- 154 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAG----VKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFG- 154 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCC----CCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHh-
Confidence 579999999987777776665432 344566777766544433222111000 11122345554444433332221
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc----cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID----TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~----~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
. ....++.++|+|+|.+.+...........+ .++.+|+++||+.+.||+..+++|+..
T Consensus 155 ----------------~--~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~ 216 (358)
T cd03812 155 ----------------K--VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAE 216 (358)
T ss_pred ----------------C--CCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHH
Confidence 0 123467899999999877543221111111 567899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|++ .++.+|. ++....+++.++ +. ++.+.+.+.|. .+++..+|+.||++|+||
T Consensus 217 l~~~~~~~----~l~ivG~-----g~~~~~~~~~~~----~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~ps 274 (358)
T cd03812 217 LLKKNPNA----KLLLVGD-----GELEEEIKKKVK----EL-------GLEDKVIFLGV--RNDVPELLQAMDVFLFPS 274 (358)
T ss_pred HHHhCCCe----EEEEEeC-----CchHHHHHHHHH----hc-------CCCCcEEEecc--cCCHHHHHHhcCEEEecc
Confidence 99988875 4666663 222333333332 22 22233455576 678999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
..||||++++||||| |.|+|+|+.+|..+.+.+ +.+..+.+++++|++|.++++++..+++++..+.
T Consensus 275 ~~E~~~~~~lEAma~-----G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~ 343 (358)
T cd03812 275 LYEGLPLVLIEAQAS-----GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKK 343 (358)
T ss_pred cccCCCHHHHHHHHh-----CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhh
Confidence 999999999999999 778899999998887754 5555566789999999999999887766654443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-17 Score=208.84 Aligned_cols=317 Identities=16% Similarity=0.167 Sum_probs=190.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC----CCCc
Q psy775 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP----FPPW 253 (1460)
Q Consensus 178 ~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP----FPs~ 253 (1460)
.+-|.....+++..++.+.... ....|+|-.|...=-+++..|++++ +++..+..|.. .+.+
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~---------~~~pDlIHahy~d~glva~lla~~l-----gVP~v~t~HsL~~~K~~~~ 426 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAEL---------QGKPDLIIGNYSDGNLVASLLARKL-----GVTQCTIAHALEKTKYPDS 426 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCCCCEEEECCCchHHHHHHHHHhc-----CCCEEEECCcchhhccccc
Confidence 4567777777777766654321 1246999888655557777777654 46666666742 1111
Q ss_pred cc-cccCCCcHH-------HHhhhccCceeeeccHHhHHHHHHHHHhhcCce--ecCCCcEEEECC---eEEEEEEeecc
Q psy775 254 DI-FRLFPWSDE-------ILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR--VDRKNLLVEHGG---RTVRIRPLPIA 320 (1460)
Q Consensus 254 ei-fr~LP~r~e-------il~gLL~aDlIgF~t~~yar~FL~~~~riLg~~--~~~~~~~i~~~G---r~vkV~viPiG 320 (1460)
.. +..+..+.. =+..|-.||.|--.|+.-+..-.+.+.+ +++- .....+.-..+| ...|+.++|+|
T Consensus 427 g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPG 505 (784)
T TIGR02470 427 DIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPG 505 (784)
T ss_pred ccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCC
Confidence 11 111111100 1144556777777665321111111000 0000 000010000111 23488999999
Q ss_pred cCchhhhhhhccchh--------------------hh----ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCc
Q psy775 321 IPYERFVQLAQAAPR--------------------VI----DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376 (1460)
Q Consensus 321 ID~~~f~~~~~~~~~--------------------~~----~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~k 376 (1460)
+|++.|.+......+ .. ..++++|++|||+++.||+..+++||.++.+..+ .
T Consensus 506 VD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~ 581 (784)
T TIGR02470 506 ADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----L 581 (784)
T ss_pred cChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----C
Confidence 999988654322111 00 1467899999999999999999999987643333 3
Q ss_pred EEEEEEEcCCCC---ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC-CCHHHHHHHHH----hccEEEEccCCC
Q psy775 377 VTLLQIAVPSRT---DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC-ISQDELASFYR----DAAVALVTPLRD 448 (1460)
Q Consensus 377 vvLvqig~psr~---~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~-v~~eeL~aLY~----aADV~VvpSlrE 448 (1460)
+.|+++|.+... ...+..+..+++.+++.+.+.. .-+.+.|. .+..++..+|+ .+||||+||.+|
T Consensus 582 ~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~-------g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~E 654 (784)
T TIGR02470 582 VNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH-------GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYE 654 (784)
T ss_pred eEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC-------CeEEEccCcCCcccHHHHHHHhhccCcEEEECCccc
Confidence 567777754321 1122223444556666554322 22444565 35566666665 347999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL----TMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL----~m~~~er~~R~~~l~~~v 521 (1460)
||||+++||||| |.|+|+|..+|..+.+.+ |++|+|.|++++|++|.+++ +++...++.+.+++++..
T Consensus 655 pFGLvvLEAMAc-----GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~ 729 (784)
T TIGR02470 655 AFGLTVLEAMTC-----GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIY 729 (784)
T ss_pred CCCHHHHHHHHc-----CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 999999999999 677899999999988843 99999999999999999876 455454555555555555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
++++
T Consensus 730 ~~FS 733 (784)
T TIGR02470 730 EKYT 733 (784)
T ss_pred HhCC
Confidence 6666
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.8e-18 Score=198.47 Aligned_cols=193 Identities=17% Similarity=0.240 Sum_probs=142.9
Q ss_pred EEeecccCchhhhhhhccc-hhh--hccCCeEEEEecCccccCCHHHHHHHHHHHHHhC---CCCCCcEEEEEEEcCCCC
Q psy775 315 RPLPIAIPYERFVQLAQAA-PRV--IDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH---PEHLEKVTLLQIAVPSRT 388 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~-~~~--~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~---P~~~~kvvLvqig~psr~ 388 (1460)
.++|+|+|.+.|.+..... ... ...+..+++++||+.+.||+..+++|++++.++. |+ +.|+.+|.+...
T Consensus 182 ~vi~n~vd~~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~ 257 (392)
T cd03805 182 EVVYPCVDTDSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN----VRLVIAGGYDPR 257 (392)
T ss_pred ceeCCCcCHHHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----eEEEEEcCCCCC
Confidence 5889999998886542221 111 1156788999999999999999999999998876 55 457777754321
Q ss_pred ChHHHHHHHHHHHHHHHH-HhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC
Q psy775 389 DVKEYQDLKEEMDQLVGR-INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 467 (1460)
Q Consensus 389 ~~~ey~~L~~ev~~lv~~-IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G 467 (1460)
.....++.+++.+++.+ .+. ..-+.|.|.++.+++..+|+.||++++||..||||++++||||| |.
T Consensus 258 -~~~~~~~~~~l~~~~~~~~~l-------~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~-----G~ 324 (392)
T cd03805 258 -VAENVEYLEELQRLAEELLLL-------EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA-----GK 324 (392)
T ss_pred -CchhHHHHHHHHHHHHHhcCC-------CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc-----CC
Confidence 11222344455555544 221 23355679999999999999999999999999999999999999 67
Q ss_pred eEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 468 VLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 468 vlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|+|..+|..+.+.+ |++++| |++++|++|.++++++...++++.++......+++
T Consensus 325 PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s 384 (392)
T cd03805 325 PVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFS 384 (392)
T ss_pred CEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcC
Confidence 7899999888877744 888877 99999999999999876655555555444444455
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=213.39 Aligned_cols=188 Identities=22% Similarity=0.247 Sum_probs=142.5
Q ss_pred eEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
...++.++|+|||.+.|.+.... ....++++|+++||+.+.||+..+++|+..+.++.|++ .++++|... .+
T Consensus 265 ~~~ki~vIpNgid~~~f~~~~~~---~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~ 336 (475)
T cd03813 265 DPEKIRVIPNGIDPERFAPARRA---RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED 336 (475)
T ss_pred CHHHeEEeCCCcCHHHcCCcccc---ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC
Confidence 44578899999999988654221 01145778999999999999999999999999888875 466565332 12
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeE
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVL 469 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gvl 469 (1460)
.++.+++++++.+.+.. ..+.|.| .+++..+|+.||++|+||..|||+++++||||| |.|+
T Consensus 337 ----~~~~~e~~~li~~l~l~-------~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-----G~PV 397 (475)
T cd03813 337 ----PEYAEECRELVESLGLE-------DNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-----GIPV 397 (475)
T ss_pred ----hHHHHHHHHHHHHhCCC-------CeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-----CCCE
Confidence 23455666666665532 2345557 677889999999999999999999999999999 6778
Q ss_pred EEcCCCCchhcccc---------cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 470 IVSPFAGAGEQMHE---------ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 470 VlSe~aGaa~~L~~---------allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|..+|+.+.+.+ |++++|.|++++|++|.++++++...+++..++ ++.+.+++
T Consensus 398 Vatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a-~~~v~~~~ 461 (475)
T cd03813 398 VATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAG-RKRVERYY 461 (475)
T ss_pred EECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHhC
Confidence 99999888777743 899999999999999999999766555554444 44555444
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=211.29 Aligned_cols=345 Identities=11% Similarity=0.094 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhh-cCcCceEEEEeeCC-----CCCccccc-cCc---
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE-QNLKFKLGFFLHIP-----FPPWDIFR-LFP--- 615 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~-~~~~~kigfFLHiP-----fP~~e~fr-~lP--- 615 (1460)
|+.++++.+... + ..+|+|-.||||--++|.++.+.... ...+.+..|..|-= ||...+.. .+|
T Consensus 596 FsrAaLe~~~~~--~----~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 596 FSRAALELLYQS--G----KKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHhc--C----CCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 777777765432 1 23479999999998885544422211 12446788888872 43222110 111
Q ss_pred ------------cHHHHH-hhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHh
Q psy775 616 ------------WSDEIL-QGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFV 682 (1460)
Q Consensus 616 ------------~r~eIL-~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~ 682 (1460)
..-.+| -++..||.|-.-++.|++.-++ . .|.... -.++.+..++.++|+|||++.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e--~G~GL~-----~~L~~~~~Kl~gIlNGID~e~wn 740 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--E--GGRGLQ-----DTLKFHSKKFVGILNGIDTDTWN 740 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--H--hccchH-----HHhccccCCceEEecceehhhcC
Confidence 111233 3566789998888988877554 1 111110 01234567789999999999887
Q ss_pred HHHhcCccccccchhhhccccccccchhh--HHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHH
Q psy775 683 QLAQAAPRVIDTKQKIVLGVDRLDYTKGL--IESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRL 760 (1460)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL 760 (1460)
+.... .+ -...+..++..+. -..+|+++|++. -..+.++|++|||+.+.||+...+
T Consensus 741 PatD~---~L------~~~Ys~~dl~GK~~nK~aLRkelGL~~-------------~d~d~pLIg~VGRL~~QKGiDlLl 798 (977)
T PLN02939 741 PSTDR---FL------KVQYNANDLQGKAANKAALRKQLGLSS-------------ADASQPLVGCITRLVPQKGVHLIR 798 (977)
T ss_pred Ccccc---cc------ccccChhhhhhhhhhhHHHHHHhCCCc-------------ccccceEEEEeecCCcccChHHHH
Confidence 53211 00 0001111111100 134666665430 002468999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccE
Q psy775 761 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 840 (1460)
Q Consensus 761 ~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv 840 (1460)
+|+.++++ ++ +.|+.+|.+.. + .+++++..++.+.+.. ..+.|.+.++......+|+.||+
T Consensus 799 eA~~~Ll~--~d----vqLVIvGdGp~---~---~~e~eL~~La~~l~l~-------drV~FlG~~de~lah~IYAaADI 859 (977)
T PLN02939 799 HAIYKTAE--LG----GQFVLLGSSPV---P---HIQREFEGIADQFQSN-------NNIRLILKYDEALSHSIYAASDM 859 (977)
T ss_pred HHHHHHhh--cC----CEEEEEeCCCc---H---HHHHHHHHHHHHcCCC-------CeEEEEeccCHHHHHHHHHhCCE
Confidence 99999875 22 45666664421 1 3456677777765432 23666778888888899999999
Q ss_pred EEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCC
Q psy775 841 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINE 920 (1460)
Q Consensus 841 ~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 920 (1460)
||+||.+||||++.+|||+| +.|+|+|..+|..++. .+++.+
T Consensus 860 FLmPSr~EPfGLvqLEAMAy-----GtPPVVs~vGGL~DtV------~d~d~e--------------------------- 901 (977)
T PLN02939 860 FIIPSMFEPCGLTQMIAMRY-----GSVPIVRKTGGLNDSV------FDFDDE--------------------------- 901 (977)
T ss_pred EEECCCccCCcHHHHHHHHC-----CCCEEEecCCCCccee------ecCCcc---------------------------
Confidence 99999999999999999999 7799999999987711 110000
Q ss_pred CCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhC----CCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 921 PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT----MPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 921 ~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~----m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.+.+ ...++++++|.|+++++++|.+++. .+...++++.+. ....+++...++++.+-+..+
T Consensus 902 ----~i~~-------eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a---m~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 902 ----TIPV-------ELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD---MNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred ----cccc-------CCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHH
Confidence 0000 1135799999999999999999986 233333333332 335688899988887766665
Q ss_pred hh
Q psy775 997 IT 998 (1460)
Q Consensus 997 ~~ 998 (1460)
..
T Consensus 968 l~ 969 (977)
T PLN02939 968 VA 969 (977)
T ss_pred HH
Confidence 53
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=193.75 Aligned_cols=261 Identities=16% Similarity=0.125 Sum_probs=175.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC----CCCccccccCCCcHHHH-hhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP----FPPWDIFRLFPWSDEIL-QGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP----FPs~eifr~LP~r~eil-~gLL~aDlIgF~t~~yar~ 285 (1460)
..|+|.+|+....+....+.++. +.++.+.+|-- .+.............+. ..+..+|.|-+.+....+.
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~~-----~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 156 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARRL-----GVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDR 156 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHHc-----CCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHH
Confidence 36999999776544444443322 46777777832 12111111000011112 2223477777777654444
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
+.+. +....++.++|+|+|.+.|.+... ..+.++++++||+.+.||+..+++|+..
T Consensus 157 ~~~~------------------~~~~~~i~vi~~g~d~~~~~~~~~------~~~~~~i~~~G~~~~~K~~~~li~a~~~ 212 (367)
T cd05844 157 LLAL------------------GFPPEKVHVHPIGVDTAKFTPATP------ARRPPRILFVGRFVEKKGPLLLLEAFAR 212 (367)
T ss_pred HHHc------------------CCCHHHeEEecCCCCHHhcCCCCC------CCCCcEEEEEEeeccccChHHHHHHHHH
Confidence 4331 122346778999999988754211 1345689999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|++ .|+++|. ++.. ++++.++.+.+ +.+.+.+.|.++.+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~ivG~-----g~~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps 272 (367)
T cd05844 213 LARRVPEV----RLVIIGD-----GPLL----AALEALARALG-------LGGRVTFLGAQPHAEVRELMRRARIFLQPS 272 (367)
T ss_pred HHHhCCCe----EEEEEeC-----chHH----HHHHHHHHHcC-------CCCeEEECCCCCHHHHHHHHHhCCEEEECc
Confidence 98888875 4666662 2222 33444444322 223356679999999999999999999999
Q ss_pred C------CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 446 L------RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 446 l------rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
. .||||++++||||| |.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++++++..++++.++
T Consensus 273 ~~~~~~~~E~~~~~~~EA~a~-----G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a 347 (367)
T cd05844 273 VTAPSGDAEGLPVVLLEAQAS-----GVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAG 347 (367)
T ss_pred ccCCCCCccCCchHHHHHHHc-----CCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 7 59999999999999 67889999998887773 3899999999999999999998765444444444
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
......+++
T Consensus 348 ~~~~~~~~s 356 (367)
T cd05844 348 RRRVEERFD 356 (367)
T ss_pred HHHHHHHCC
Confidence 333334455
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-18 Score=206.47 Aligned_cols=258 Identities=19% Similarity=0.242 Sum_probs=172.5
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhc-cCCCceEEEEEecCCCCc----ccccc--CCC--------------cHHHHhhh
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADE-QNLKFKLGFFLHIPFPPW----DIFRL--FPW--------------SDEILQGM 269 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~-~~~~~~IgfFlHiPFPs~----eifr~--LP~--------------r~eil~gL 269 (1460)
..|+|-+||+|-.++|.+++..... ...+.++.|..|-+.+.. ..+.. +++ ..-+-.++
T Consensus 129 ~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (476)
T cd03791 129 KPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGI 208 (476)
T ss_pred CCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHH
Confidence 5799999999999999999875310 012679999999864321 11100 011 01222334
Q ss_pred ccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEE--ECCeEEEEEEeecccCchhhhhhhccc--------------
Q psy775 270 LGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE--HGGRTVRIRPLPIAIPYERFVQLAQAA-------------- 333 (1460)
Q Consensus 270 L~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~--~~Gr~vkV~viPiGID~~~f~~~~~~~-------------- 333 (1460)
..||.|-.-++.|++..++.-. | . .++ ...+..++.++|+|||.+.|.+.....
T Consensus 209 ~~ad~v~~vS~~~~~~i~~~~~---~------~-gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (476)
T cd03791 209 VYADAVTTVSPTYAREILTPEF---G------E-GLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKA 278 (476)
T ss_pred HhcCcCeecCHhHHHHhCCCCC---C------c-chHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHH
Confidence 4555555555555443332100 0 0 000 112346889999999998886532210
Q ss_pred ---hhhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Q psy775 334 ---PRVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 403 (1460)
Q Consensus 334 ---~~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~l 403 (1460)
..+++ .++++|+++||+.+.||+..+++|++++.++. +.|+.+|.+ + + .+.+++.++
T Consensus 279 ~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~---~~~~~~~~~ 345 (476)
T cd03791 279 ENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG---D-P---EYEEALREL 345 (476)
T ss_pred HHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC---C-H---HHHHHHHHH
Confidence 01111 46789999999999999999999999987653 446666633 1 1 233444444
Q ss_pred HHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-
Q psy775 404 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH- 482 (1460)
Q Consensus 404 v~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~- 482 (1460)
+.+... .++++.+ .+.+++..+|+.||++++||.+||||++.+|||+| |.|+|+|..+|..+.+.
T Consensus 346 ~~~~~~--------~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-----G~pvI~~~~gg~~e~v~~ 411 (476)
T cd03791 346 AARYPG--------RVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY-----GTVPIVRATGGLADTVID 411 (476)
T ss_pred HHhCCC--------cEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC-----CCCCEECcCCCccceEeC
Confidence 443211 3455544 55777789999999999999999999999999999 67779999999988883
Q ss_pred --------ccEEECCCCHHHHHHHHHHHcCC
Q psy775 483 --------EALICNPYEIDAAAEVIHRALTM 505 (1460)
Q Consensus 483 --------~allVNP~D~~elA~AI~~aL~m 505 (1460)
.|++++|.|+++++++|.++++.
T Consensus 412 ~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 412 YNEDTGEGTGFVFEGYNADALLAALRRALAL 442 (476)
T ss_pred CcCCCCCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 48999999999999999998864
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-17 Score=196.58 Aligned_cols=243 Identities=17% Similarity=0.196 Sum_probs=178.7
Q ss_pred hcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccc
Q psy775 623 GMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGV 702 (1460)
Q Consensus 623 ~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~ 702 (1460)
.+-.+|.|.+.+...++.+.+. . +....++.++|+|||.+.|.+...
T Consensus 160 ~~~~~d~vi~~s~~~~~~~~~~----~-------------~~~~~ki~vi~ngvd~~~~~~~~~---------------- 206 (405)
T TIGR03449 160 LVDNADRLIANTDEEARDLVRH----Y-------------DADPDRIDVVAPGADLERFRPGDR---------------- 206 (405)
T ss_pred HHHhcCeEEECCHHHHHHHHHH----c-------------CCChhhEEEECCCcCHHHcCCCcH----------------
Confidence 3457899999998887776542 1 122346788999999887753100
Q ss_pred cccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEE
Q psy775 703 DRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQI 782 (1460)
Q Consensus 703 ~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi 782 (1460)
...++++++ ..++++|+++||+.+.||+..+++|++++++++|+. ++.|+.+
T Consensus 207 ----------~~~~~~~~~----------------~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~--~~~l~iv 258 (405)
T TIGR03449 207 ----------ATERARLGL----------------PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDR--NLRVIVV 258 (405)
T ss_pred ----------HHHHHhcCC----------------CCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCc--ceEEEEE
Confidence 122333332 246789999999999999999999999999999873 5788888
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeecc
Q psy775 783 AVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQI 862 (1460)
Q Consensus 783 ~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~ 862 (1460)
|.+.....+. .+++++++++.+. ...+.+.|.++.+++..+|+.||++++||..||||++.+|||+|
T Consensus 259 G~~~~~g~~~----~~~l~~~~~~~~l-------~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~-- 325 (405)
T TIGR03449 259 GGPSGSGLAT----PDALIELAAELGI-------ADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQAC-- 325 (405)
T ss_pred eCCCCCcchH----HHHHHHHHHHcCC-------CceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHc--
Confidence 8654321122 2345555554432 33477889999999999999999999999999999999999999
Q ss_pred CCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEE
Q psy775 863 NEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 942 (1460)
Q Consensus 863 ~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~all 942 (1460)
+.|+|+|..+|..+.+ .++ ..+++
T Consensus 326 ---G~Pvi~~~~~~~~e~i---------------------------------------------~~~--------~~g~~ 349 (405)
T TIGR03449 326 ---GTPVVAARVGGLPVAV---------------------------------------------ADG--------ETGLL 349 (405)
T ss_pred ---CCCEEEecCCCcHhhh---------------------------------------------ccC--------CceEE
Confidence 7899999988866611 111 34689
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 943 CNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 943 VnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++|.|++++|++|.++++.+....+.+. ..++.+..++++..++++++-+.+.
T Consensus 350 ~~~~d~~~la~~i~~~l~~~~~~~~~~~-~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 350 VDGHDPADWADALARLLDDPRTRIRMGA-AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred CCCCCHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999986544334443 3456677889998888888776654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=190.60 Aligned_cols=261 Identities=20% Similarity=0.192 Sum_probs=172.7
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhh-ccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGM-LGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gL-L~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|++|.+|..++..+++...+ ..++....|...+.... +..+.+.. ..++.+...+....+.|+..
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~----~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 148 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLP----SPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIAS 148 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCC----CCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHhc
Confidence 478999999998888777765422 45666667743221100 11111110 01333333344333333331
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEEEecCccccCCHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVLGVDRLDYTKGLVHRLKAFE 364 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af~ 364 (1460)
..-...++.++|+|+|...|...........+ .++++++++||+.+.||+..+++|+.
T Consensus 149 -----------------~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~ 211 (360)
T cd04951 149 -----------------KAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFA 211 (360)
T ss_pred -----------------cCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHH
Confidence 00123467789999998877543221111111 46789999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEc
Q psy775 365 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 444 (1460)
Q Consensus 365 ~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vvp 444 (1460)
++.+++|++ .|+++|.+ +..+++++ .+.+.+. .+.+.+.|. .+++..+|+.||++++|
T Consensus 212 ~l~~~~~~~----~l~i~G~g-----~~~~~~~~----~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 212 KLLSDYLDI----KLLIAGDG-----PLRATLER----LIKALGL-------SNRVKLLGL--RDDIAAYYNAADLFVLS 269 (360)
T ss_pred HHHhhCCCe----EEEEEcCC-----CcHHHHHH----HHHhcCC-------CCcEEEecc--cccHHHHHHhhceEEec
Confidence 999888775 46656532 22223333 3333222 233445575 46788999999999999
Q ss_pred cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc-cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 445 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 445 SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~-allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
|..||||++++||||| |.|+|+|..+|..+.+.+ +..++|.|+++++++|.+++++++..++...+......+.
T Consensus 270 s~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 344 (360)
T cd04951 270 SAWEGFGLVVAEAMAC-----ELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKK 344 (360)
T ss_pred ccccCCChHHHHHHHc-----CCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999 677899999888887765 8999999999999999999977777766665553334444
Q ss_pred cC
Q psy775 524 MN 525 (1460)
Q Consensus 524 ~~ 525 (1460)
++
T Consensus 345 ~s 346 (360)
T cd04951 345 FS 346 (360)
T ss_pred cC
Confidence 44
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-16 Score=187.52 Aligned_cols=266 Identities=14% Similarity=0.107 Sum_probs=174.5
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|.+|.+.-..++.++..++.. ..+.++.+.+|-.-. .....-+ .+.-+...+-.+|.|...+......+.+.
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILG-KKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcC-cCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh
Confidence 4789999987655566666543321 124677777883210 0111112 12223344556898888888766655441
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-c--cCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-D--TKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-~--~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
. +...++.++|+|+|...|.+......+.. . .++++++++||+.+.||+..+++|+.++
T Consensus 161 ~------------------~~~~~i~vi~n~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l 222 (371)
T cd04962 161 F------------------DITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKV 222 (371)
T ss_pred c------------------CCcCCEEEecCCcCHhhcCCCchHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHH
Confidence 1 11235778999999877754322111111 1 5678999999999999999999999988
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
.++. ++ .++.+|.+ +....+++. +.+.+ ..+.+.+.|.. +++..+|+.||++++||.
T Consensus 223 ~~~~-~~----~l~i~G~g-----~~~~~~~~~----~~~~~-------~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~ 279 (371)
T cd04962 223 RKEV-PA----RLLLVGDG-----PERSPAERL----ARELG-------LQDDVLFLGKQ--DHVEELLSIADLFLLPSE 279 (371)
T ss_pred HhcC-Cc----eEEEEcCC-----cCHHHHHHH----HHHcC-------CCceEEEecCc--ccHHHHHHhcCEEEeCCC
Confidence 6553 33 35555533 222233333 33322 12224445754 578999999999999999
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
.||||++++|||+| |.|+|+|+.+|..+.+.+ |++++|.|+++++++|.++++++....+++.++......+
T Consensus 280 ~E~~~~~~~EAma~-----g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 354 (371)
T cd04962 280 KESFGLAALEAMAC-----GVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAER 354 (371)
T ss_pred cCCCccHHHHHHHc-----CCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 677899999998887743 8999999999999999999986655444444443333445
Q ss_pred cC
Q psy775 524 MN 525 (1460)
Q Consensus 524 ~~ 525 (1460)
++
T Consensus 355 fs 356 (371)
T cd04962 355 FD 356 (371)
T ss_pred CC
Confidence 55
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-17 Score=189.13 Aligned_cols=261 Identities=18% Similarity=0.146 Sum_probs=179.7
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|.+|..+...+..+..+. .+.++.+.+|-.++... +...+ +..+|.+-+.+......+.+
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~------~~~~~---~~~~~~vi~~s~~~~~~~~~-- 141 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARR-----TRPPFVTTVHGFYSVNF------RYNAI---MARGDRVIAVSNFIADHIRE-- 141 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHh-----cCCCEEEEeCCchhhHH------HHHHH---HHhcCEEEEeCHHHHHHHHH--
Confidence 4799999987765555544432 25788889996655332 22233 33578877766655444431
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchh---hh-----ccCCeEEEEecCccccCCHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR---VI-----DTKQKIVLGVDRLDYTKGLVHRLKA 362 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~---~~-----~~~~kvIL~VgRLd~~KGI~~lL~A 362 (1460)
. ++....++.++|+|+|.+.|.+....... .+ ..++++++++||+.+.||+..+++|
T Consensus 142 --~-------------~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~ 206 (355)
T cd03819 142 --N-------------YGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEA 206 (355)
T ss_pred --h-------------cCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHH
Confidence 1 11223467789999999887543221111 11 1467889999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEE
Q psy775 363 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 442 (1460)
Q Consensus 363 f~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~V 442 (1460)
+..+.+++|++ .++.+|..... +.+.+.+.+.+.+.+. .+-+.+.|. .+++..+|+.||+++
T Consensus 207 ~~~l~~~~~~~----~l~ivG~~~~~-----~~~~~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~l~~ad~~i 268 (355)
T cd03819 207 LARLKKDDPDV----HLLIVGDAQGR-----RFYYAELLELIKRLGL-------QDRVTFVGH--CSDMPAAYALADIVV 268 (355)
T ss_pred HHHHHhcCCCe----EEEEEECCccc-----chHHHHHHHHHHHcCC-------cceEEEcCC--cccHHHHHHhCCEEE
Confidence 99998876654 46666644321 2233334333333222 222445576 778999999999999
Q ss_pred Ecc-CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy775 443 VTP-LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518 (1460)
Q Consensus 443 vpS-lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~ 518 (1460)
+|| ..||||++.+||||| |.|+|+|..+|..+.+. .|++++|.|+++++++|..++..++++++...+..+
T Consensus 269 ~ps~~~e~~~~~l~EA~a~-----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~ 343 (355)
T cd03819 269 SASTEPEAFGRTAVEAQAM-----GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKAR 343 (355)
T ss_pred ecCCCCCCCchHHHHHHhc-----CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 999 799999999999999 67789999888877774 389999999999999998888777777665555556
Q ss_pred HHHhhcC
Q psy775 519 KREKHMN 525 (1460)
Q Consensus 519 ~~v~~~~ 525 (1460)
+.+.++.
T Consensus 344 ~~~~~~f 350 (355)
T cd03819 344 MCVETLF 350 (355)
T ss_pred HHHHHhh
Confidence 6655444
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-17 Score=199.63 Aligned_cols=336 Identities=13% Similarity=0.147 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhc--CcCceEEEEeeCC-----CCCccccccCccH-
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ--NLKFKLGFFLHIP-----FPPWDIFRLFPWS- 617 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~--~~~~kigfFLHiP-----fP~~e~fr~lP~r- 617 (1460)
|+..+++.+.... ...|+|-.||||--++|.++++..... ..+.+..+..|.. ||....-..+|+.
T Consensus 127 f~~a~l~~~~~~~------~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~ 200 (489)
T PRK14098 127 FNVGVLETLQRLG------WKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEV 200 (489)
T ss_pred HHHHHHHHHHhcC------CCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHh
Confidence 6666666553211 123799999999999999998543211 2357888999974 1111100001110
Q ss_pred -----------HHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHh
Q psy775 618 -----------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQ 686 (1460)
Q Consensus 618 -----------~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~ 686 (1460)
.-+-.++..||.|---++.|++.-++....-.|++ -..+.+..++.++|+|||++.|.+...
T Consensus 201 ~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~-------~~l~~~~~kl~~I~NGID~~~~~p~~d 273 (489)
T PRK14098 201 CSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD-------KVLEERKMRLHGILNGIDTRQWNPSTD 273 (489)
T ss_pred hhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH-------HHHHhcCCCeeEEeCCccccccCCccc
Confidence 00111334444444444444333111000000000 000113567899999999998875321
Q ss_pred cCccccccchhhhccccccccc-h-hhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHH
Q psy775 687 AAPRVIDTKQKIVLGVDRLDYT-K-GLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFE 764 (1460)
Q Consensus 687 ~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe 764 (1460)
. ... .+ .+++ +.. | ..-..+++++|++ ...++++|++|||+.+.||+..+++|+.
T Consensus 274 ~--~~~-~~----~~~~--~~~~k~~~k~~l~~~lgl~--------------~~~~~~~i~~vgRl~~~KG~d~li~a~~ 330 (489)
T PRK14098 274 K--LIK-KR----YSIE--RLDGKLENKKALLEEVGLP--------------FDEETPLVGVIINFDDFQGAELLAESLE 330 (489)
T ss_pred c--ccc-cc----CCcc--hhhhHHHHHHHHHHHhCCC--------------CccCCCEEEEeccccccCcHHHHHHHHH
Confidence 1 000 00 0000 000 0 0012344444432 1245789999999999999999999999
Q ss_pred HHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEEC
Q psy775 765 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 844 (1460)
Q Consensus 765 ~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvt 844 (1460)
++++. ++.|+.+|.+. + .+++++++++.+...+ +.+.+.++.+++..+|+.||++++|
T Consensus 331 ~l~~~------~~~lvivG~G~----~---~~~~~l~~l~~~~~~~---------V~~~g~~~~~~~~~~~a~aDi~l~P 388 (489)
T PRK14098 331 KLVEL------DIQLVICGSGD----K---EYEKRFQDFAEEHPEQ---------VSVQTEFTDAFFHLAIAGLDMLLMP 388 (489)
T ss_pred HHHhc------CcEEEEEeCCC----H---HHHHHHHHHHHHCCCC---------EEEEEecCHHHHHHHHHhCCEEEeC
Confidence 98752 35677777432 1 2456677776654322 5567788999999999999999999
Q ss_pred CCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCce
Q psy775 845 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGV 924 (1460)
Q Consensus 845 SlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 924 (1460)
|..||||++.+|||+| +.|+|++..+|..+.+
T Consensus 389 S~~E~~Gl~~lEAma~-----G~ppVv~~~GGl~d~v------------------------------------------- 420 (489)
T PRK14098 389 GKIESCGMLQMFAMSY-----GTIPVAYAGGGIVETI------------------------------------------- 420 (489)
T ss_pred CCCCCchHHHHHHHhC-----CCCeEEecCCCCceee-------------------------------------------
Confidence 9999999999999999 6788999998877611
Q ss_pred eEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 925 LIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM---PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 925 ~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
. ++.+ .-..+++++|.|++++|++|.+++.+ +...++...+. ....++++.-++++++-+++.
T Consensus 421 --~-~~~~---~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 421 --E-EVSE---DKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA---MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred --e-cCCC---CCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH---hcCCCChHHHHHHHHHHHHHH
Confidence 0 1110 01346899999999999999998743 22222222222 235677777777776665544
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=8e-17 Score=184.56 Aligned_cols=191 Identities=20% Similarity=0.304 Sum_probs=137.1
Q ss_pred EEEEEEeecccCchhhhhhhccch-hhh--ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCC
Q psy775 311 TVRIRPLPIAIPYERFVQLAQAAP-RVI--DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSR 387 (1460)
Q Consensus 311 ~vkV~viPiGID~~~f~~~~~~~~-~~~--~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr 387 (1460)
..++.++|+|+|.+.+........ ... ..++++++++||+.+.||+..+++|+.++.+++|++ .++.+|....
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~~~ 245 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDW----HLVIAGPDEG 245 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCe----EEEEECCCCc
Confidence 456789999999988754322111 111 156788999999999999999999999999888775 4666663321
Q ss_pred CChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC
Q psy775 388 TDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 467 (1460)
Q Consensus 388 ~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G 467 (1460)
.+.. .+..++.+.+ ..+.+.+.|.++.+++..+|+.||++++||..||||++++|||+| |.
T Consensus 246 ----~~~~---~~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~ 306 (375)
T cd03821 246 ----GYRA---ELKQIAAALG-------LEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALAC-----GT 306 (375)
T ss_pred ----chHH---HHHHHHHhcC-------ccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhc-----CC
Confidence 1211 2222222222 223456679999999999999999999999999999999999999 67
Q ss_pred eEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 468 VLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 468 vlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|+|..+|..+.+.+ ++++ |.+.++++++|.++++++...+....++.....++++
T Consensus 307 PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 307 PVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 7899999888877753 5555 4566999999999999885544444444333345554
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=200.30 Aligned_cols=331 Identities=18% Similarity=0.196 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCC----ccccc--cCccH--
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP----WDIFR--LFPWS-- 617 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~----~e~fr--~lP~r-- 617 (1460)
|+...++.++... ...|+|..||||-.++|.+++..... ...+..+..|-.... .+.+. .+|+.
T Consensus 114 f~~a~~~~~~~~~------~~~DiiH~hdw~~~~~~~~l~~~~~~--~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~ 185 (473)
T TIGR02095 114 FSRAAAELLSGLG------WQPDVVHAHDWHTALVPALLKAVYRP--NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYF 185 (473)
T ss_pred HHHHHHHHHHhcC------CCCCEEEECCcHHHHHHHHHHhhccC--CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHc
Confidence 6666666554311 12379999999999999988733211 036788888875211 11111 11110
Q ss_pred -----------HHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEE--ECCeEEEEEEeeCCCChhHHhHH
Q psy775 618 -----------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE--HGGRTVRIRPLPIAIPYERFVQL 684 (1460)
Q Consensus 618 -----------~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~--~~Gr~v~V~v~PiGID~~~f~~~ 684 (1460)
.-+-.++..||.|-.-++.|++...+. ..|. .++ +..+..++.++|+|||++.|.+.
T Consensus 186 ~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~-------~l~~~l~~~~~ki~~I~NGid~~~~~p~ 255 (473)
T TIGR02095 186 HMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY-------GLDGVLKARSGKLRGILNGIDTEVWNPA 255 (473)
T ss_pred CchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc-------cchhHHHhcCCCeEEEeCCCCccccCCC
Confidence 001113334444444444443332210 0000 000 01134578899999999988653
Q ss_pred HhcCccccccchhhhccccccccc--hhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHH
Q psy775 685 AQAAPRVIDTKQKIVLGVDRLDYT--KGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKA 762 (1460)
Q Consensus 685 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~A 762 (1460)
... ....+ .+...+. ....+.+|+++|++ ...++++|+++||+.+.||+...++|
T Consensus 256 ~~~---~~~~~------~~~~~~~~k~~~k~~l~~~~gl~--------------~~~~~~~i~~vGrl~~~Kg~~~li~a 312 (473)
T TIGR02095 256 TDP---YLKAN------YSADDLAGKAENKEALQEELGLP--------------VDDDVPLFGVISRLTQQKGVDLLLAA 312 (473)
T ss_pred CCc---ccccC------cCccchhhhhhhHHHHHHHcCCC--------------ccCCCCEEEEEecCccccChHHHHHH
Confidence 111 00000 0000000 00113455555433 01367899999999999999999999
Q ss_pred HHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEE
Q psy775 763 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 842 (1460)
Q Consensus 763 fe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~v 842 (1460)
++++.++. +.|+.+|.+. + .+++++++++.+.+.+ +.+.+..+.+++..+|+.||+++
T Consensus 313 ~~~l~~~~------~~lvi~G~g~----~---~~~~~l~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~aDv~l 370 (473)
T TIGR02095 313 LPELLELG------GQLVVLGTGD----P---ELEEALRELAERYPGN---------VRVIIGYDEALAHLIYAGADFIL 370 (473)
T ss_pred HHHHHHcC------cEEEEECCCC----H---HHHHHHHHHHHHCCCc---------EEEEEcCCHHHHHHHHHhCCEEE
Confidence 99987642 4566666442 2 3456666666543322 33445678888899999999999
Q ss_pred ECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCC
Q psy775 843 VTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPP 922 (1460)
Q Consensus 843 vtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 922 (1460)
+||..||||++.+|||+| +.|+|+|..+|..+.+
T Consensus 371 ~pS~~E~~gl~~lEAma~-----G~pvI~s~~gg~~e~v----------------------------------------- 404 (473)
T TIGR02095 371 MPSRFEPCGLTQLYAMRY-----GTVPIVRRTGGLADTV----------------------------------------- 404 (473)
T ss_pred eCCCcCCcHHHHHHHHHC-----CCCeEEccCCCccceE-----------------------------------------
Confidence 999999999999999999 7899999999988721
Q ss_pred ceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC----CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 923 GVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM----PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 923 ~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m----~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
.+.-.. ..-..+++++|.|++++|++|.+++.+ +...++...+. ....++++..++++++-++
T Consensus 405 ----~~~~~~--~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 405 ----VDGDPE--AESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA---MSQDFSWDKSAKQYVELYR 471 (473)
T ss_pred ----ecCCCC--CCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH---hccCCCcHHHHHHHHHHHH
Confidence 110000 000346999999999999999999873 22222222222 2246787887777766554
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.8e-17 Score=198.84 Aligned_cols=335 Identities=17% Similarity=0.206 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcC-cCceEEEEeeCC-CCCc---cccc--cCccH-
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQN-LKFKLGFFLHIP-FPPW---DIFR--LFPWS- 617 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~-~~~kigfFLHiP-fP~~---e~fr--~lP~r- 617 (1460)
|+..+++.+.... ...|+|-.||||--+++.++++.. ..+ ...+..+..|.. +... +.+. .+|+.
T Consensus 104 f~~~~~~~~~~~~------~~pDiiH~h~w~~~~~~~~l~~~~-~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~ 176 (466)
T PRK00654 104 FSWAAAEFAEGLD------PRPDIVHAHDWHTGLIPALLKEKY-WRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEA 176 (466)
T ss_pred HHHHHHHHHHhcC------CCCceEEECCcHHHHHHHHHHHhh-hccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHH
Confidence 5566666554321 123799999999999999887442 111 246788999975 2110 0000 00100
Q ss_pred ------------HHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHH
Q psy775 618 ------------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLA 685 (1460)
Q Consensus 618 ------------~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~ 685 (1460)
.-+-.++..||.|---++.|++.-.+. ..|. .+.-.++.+..++.++|+|||++.|.+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~~-----gl~~~~~~~~~ki~vI~NGid~~~~~p~~ 248 (466)
T PRK00654 177 FHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFGY-----GLEGLLRARSGKLSGILNGIDYDIWNPET 248 (466)
T ss_pred cCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCCc-----ChHHHHHhcccCceEecCCCCccccCCcc
Confidence 001112333333333333332221100 0000 00000112345789999999999886531
Q ss_pred hcCccccccchhhhccccccccch--hhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHH
Q psy775 686 QAAPRVIDTKQKIVLGVDRLDYTK--GLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAF 763 (1460)
Q Consensus 686 ~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Af 763 (1460)
.. ... . ..+..+.+. +..+.+|+++|++ ..+.++|++|||+.+.||+..+++|+
T Consensus 249 ~~--~~~-~------~~~~~~~~~k~~~k~~l~~~~gl~---------------~~~~~~i~~vGRl~~~KG~~~li~a~ 304 (466)
T PRK00654 249 DP--LLA-A------NYSADDLEGKAENKRALQERFGLP---------------DDDAPLFAMVSRLTEQKGLDLVLEAL 304 (466)
T ss_pred Cc--ccc-c------ccChhhhhchHHHHHHHHHHhCCC---------------CCCCcEEEEeeccccccChHHHHHHH
Confidence 10 000 0 000000000 0113445554432 13578999999999999999999999
Q ss_pred HHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEE
Q psy775 764 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 843 (1460)
Q Consensus 764 e~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vv 843 (1460)
++++++ + +.|+.+|.+. + .+++++++++.+.+.+ ++++.+. +.+....+|+.||++|+
T Consensus 305 ~~l~~~--~----~~lvivG~g~----~---~~~~~l~~l~~~~~~~--------v~~~~g~-~~~~~~~~~~~aDv~v~ 362 (466)
T PRK00654 305 PELLEQ--G----GQLVLLGTGD----P---ELEEAFRALAARYPGK--------VGVQIGY-DEALAHRIYAGADMFLM 362 (466)
T ss_pred HHHHhc--C----CEEEEEecCc----H---HHHHHHHHHHHHCCCc--------EEEEEeC-CHHHHHHHHhhCCEEEe
Confidence 998764 2 4566666432 1 2456677776655322 3445554 66667789999999999
Q ss_pred CCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCc
Q psy775 844 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPG 923 (1460)
Q Consensus 844 tSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 923 (1460)
||.+||||++.+|||+| +.|+|+|..+|..+.+. +.+
T Consensus 363 PS~~E~~gl~~lEAma~-----G~p~V~~~~gG~~e~v~-----~~~--------------------------------- 399 (466)
T PRK00654 363 PSRFEPCGLTQLYALRY-----GTLPIVRRTGGLADTVI-----DYN--------------------------------- 399 (466)
T ss_pred CCCCCCchHHHHHHHHC-----CCCEEEeCCCCccceee-----cCC---------------------------------
Confidence 99999999999999999 78999999999877211 000
Q ss_pred eeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 924 VLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM---PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 924 ~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
+.. .-..+++|+|.|+++++++|.++++. ++..++.+.+.+ ...++++.-+++.++-+.+.
T Consensus 400 -----~~~----~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 400 -----PED----GEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM---AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred -----CCC----CCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCChHHHHHHHHHHHHHH
Confidence 000 00346999999999999999999863 222222222222 25677777777776665544
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=190.98 Aligned_cols=265 Identities=14% Similarity=0.083 Sum_probs=170.3
Q ss_pred CCCEEEEeCcchhHHH-H-HHHhhhhccCCCceEEEEEecCCCCcccc-ccCC--CcHH----HHh-hhccCceeeeccH
Q psy775 211 GTPLVWIHDYHLMLAA-N-TIRNIADEQNLKFKLGFFLHIPFPPWDIF-RLFP--WSDE----ILQ-GMLGCDMVGFHIE 280 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~-~LR~~~p~~~~~~~IgfFlHiPFPs~eif-r~LP--~r~e----il~-gLL~aDlIgF~t~ 280 (1460)
..|+|++|...+...+ . .+.++. +.++.+..|--||..-.- ...+ .... +.+ .+-.+|.|...+.
T Consensus 106 ~~Div~~~~p~~~~~~~~~~~~~~~-----~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~ 180 (412)
T PRK10307 106 RPDRVIGVVPTLFCAPGARLLARLS-----GARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISR 180 (412)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHhh-----CCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCH
Confidence 4699999987654333 2 333322 356666666444421100 0000 0001 111 1224677777776
Q ss_pred HhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-hhhhc-----cCCeEEEEecCccccC
Q psy775 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA-PRVID-----TKQKIVLGVDRLDYTK 354 (1460)
Q Consensus 281 ~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~-~~~~~-----~~~kvIL~VgRLd~~K 354 (1460)
...+.+.+ .+....++.++|+|||.+.|.+..... ....+ .++++++++||+.+.|
T Consensus 181 ~~~~~~~~------------------~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 181 SMMNKARE------------------KGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHHHHH------------------cCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65554432 122344688899999998886532211 11211 4568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q psy775 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 434 (1460)
Q Consensus 355 GI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aL 434 (1460)
|+..+++|++++ +++|+ +.|+++|. ++..+++ ++++.+.+ ...| .|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~~~l----~~~~~~~~-------l~~v-~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGKARL----EKMAQCRG-------LPNV-HFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhHHHH----HHHHHHcC-------CCce-EEeCCCCHHHHHHH
Confidence 999999999876 45555 45666653 3333333 33333322 1234 45699999999999
Q ss_pred HHhccEEEEccCCCCCCcc----eeeeeeeccCCCCCeEEEcCCCCc--hhcc-cccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 435 YRDAAVALVTPLRDGMNLV----AKEFVACQINEPPGVLIVSPFAGA--GEQM-HEALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 435 Y~aADV~VvpSlrEGfnLV----alEamAcq~~~~~GvlVlSe~aGa--a~~L-~~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
|++||++++||..|+++++ .+||||| |.|+|+|..+|. .+.+ ..|++++|.|++++|++|.++++++.
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-----G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-----GRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQAL 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-----CCCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCHH
Confidence 9999999999999997655 5899999 677799988774 3444 35999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHhhcC
Q psy775 508 DERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 508 ~er~~R~~~l~~~v~~~~ 525 (1460)
...+++.++......+++
T Consensus 376 ~~~~~~~~a~~~~~~~fs 393 (412)
T PRK10307 376 LRPKLGTVAREYAERTLD 393 (412)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 666666555444445566
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=189.61 Aligned_cols=263 Identities=21% Similarity=0.225 Sum_probs=182.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCC--cccccc---CCCcHHHHhhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP--WDIFRL---FPWSDEILQGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs--~eifr~---LP~r~eil~gLL~aDlIgF~t~~yar~ 285 (1460)
..|+||+|.+..... + . .+.++.+.+|-.+|. ++.+.. ...+..+...+..+|.+-+.+...+..
T Consensus 85 ~~Dii~~~~~~~~~~----~--~----~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~ 154 (365)
T cd03809 85 GLDLLHSPHNTAPLL----R--L----RGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRD 154 (365)
T ss_pred CCCeeeecccccCcc----c--C----CCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHH
Confidence 479999998887666 1 1 257888888854432 222211 112344555566788888888766665
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhh-h-ccCCeEEEEecCccccCCHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV-I-DTKQKIVLGVDRLDYTKGLVHRLKAF 363 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~-~-~~~~kvIL~VgRLd~~KGI~~lL~Af 363 (1460)
+.+.. .....++.++|+|+|...+.......... . ..++++|+++||+.+.||+..+++|+
T Consensus 155 ~~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~ 217 (365)
T cd03809 155 LLRYL-----------------GVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAF 217 (365)
T ss_pred HHHHh-----------------CcCHHHEEeeccccCccccCCCchHHHHHHhcCCCCCeEEEeCCCccccCHHHHHHHH
Confidence 55421 11234677899999988775432111011 1 15678999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
..+.+++|+. .|+.+|...... ......+ .+. +....+.+.|.++.+++..+|+.||++++
T Consensus 218 ~~~~~~~~~~----~l~i~G~~~~~~----~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 278 (365)
T cd03809 218 ARLPAKGPDP----KLVIVGKRGWLN----EELLARL----REL-------GLGDRVRFLGYVSDEELAALYRGARAFVF 278 (365)
T ss_pred HHHHHhcCCC----CEEEecCCcccc----HHHHHHH----HHc-------CCCCeEEECCCCChhHHHHHHhhhhhhcc
Confidence 9999888754 466666433221 1122221 111 12345667799999999999999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||..||+|++++|||+| |.|+|+|+.+|..+.+. ++++++|.|.++++++|.++++.++...++..++ ++...
T Consensus 279 ps~~e~~~~~~~Ea~a~-----G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~ 352 (365)
T cd03809 279 PSLYEGFGLPVLEAMAC-----GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRERG-LARAK 352 (365)
T ss_pred cchhccCCCCHHHHhcC-----CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHH
Confidence 99999999999999999 67779999887777664 4889999999999999999988666555544433 45666
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
+++
T Consensus 353 ~~s 355 (365)
T cd03809 353 RFS 355 (365)
T ss_pred hCC
Confidence 666
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.5e-17 Score=197.98 Aligned_cols=191 Identities=17% Similarity=0.198 Sum_probs=137.2
Q ss_pred EEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC-CCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS-RTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps-r~~~~ 391 (1460)
++.++++|+|.+.+...... ...++++++++||+.+.||+..+|+||+++.++.++-..++.|+++|... .++.+
T Consensus 244 ~i~vvyp~vd~~~~~~~~~~----~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~ 319 (463)
T PLN02949 244 RIKRVYPPCDTSGLQALPLE----RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEE 319 (463)
T ss_pred CeEEEcCCCCHHHcccCCcc----ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHH
Confidence 56788899998766321110 01345789999999999999999999999987654322345677777542 12222
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
+.+++++++.+.+-. ..+.|.|+++.+++.++|+.||+++.||..||||++++||||| |.|+|+
T Consensus 320 ----~~~eL~~la~~l~L~-------~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~-----G~PVIa 383 (463)
T PLN02949 320 ----RLQKLKDRAKELGLD-------GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA-----GAVPIA 383 (463)
T ss_pred ----HHHHHHHHHHHcCCC-------CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc-----CCcEEE
Confidence 334444444443322 2245569999999999999999999999999999999999999 667899
Q ss_pred cCCCCchhcc-c----c--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 472 SPFAGAGEQM-H----E--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 472 Se~aGaa~~L-~----~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|..+|...++ . + |++++ |++++|++|.+++++++++++...+..++.+.+++
T Consensus 384 ~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS 442 (463)
T PLN02949 384 HNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFS 442 (463)
T ss_pred eCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Confidence 9988865333 2 2 67764 99999999999999876665444444455567776
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-17 Score=194.52 Aligned_cols=262 Identities=14% Similarity=0.064 Sum_probs=177.9
Q ss_pred CCCEEEEeCcchhHHH-HHHHhhhhccCCCceEEEEEecC--CCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAA-NTIRNIADEQNLKFKLGFFLHIP--FPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~~LR~~~p~~~~~~~IgfFlHiP--FPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
+.|+++.|-++-.... .+++++.. ..++...+|-. ++.......++.++.+ +-.+|.|-+.+....+.+.
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~----~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~ 199 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYL----RKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQ 199 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcC----CceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHH
Confidence 4677777765544333 34554332 33577777731 2211111222333333 3458999888887665544
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
+. +.....++.++|+|++...+... ....+...++++||+.+.||+..+++|+.++.
T Consensus 200 ~~-----------------~~~~~~ki~vi~~gv~~~~~~~~------~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~ 256 (407)
T cd04946 200 KR-----------------YPAYKEKIKVSYLGVSDPGIISK------PSKDDTLRIVSCSYLVPVKRVDLIIKALAALA 256 (407)
T ss_pred HH-----------------CCCccccEEEEECCcccccccCC------CCCCCCEEEEEeeccccccCHHHHHHHHHHHH
Confidence 31 12223466789999998765432 01145678999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh--ccEEEEcc
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD--AAVALVTP 445 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a--ADV~VvpS 445 (1460)
+++|+. ++.++.+|. ++....+++. +.+.+ ..+.+.+.|.++++++.++|+. ||+++.||
T Consensus 257 ~~~p~~--~l~~~iiG~-----g~~~~~l~~~----~~~~~-------~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S 318 (407)
T cd04946 257 KARPSI--KIKWTHIGG-----GPLEDTLKEL----AESKP-------ENISVNFTGELSNSEVYKLYKENPVDVFVNLS 318 (407)
T ss_pred HhCCCc--eEEEEEEeC-----chHHHHHHHH----HHhcC-------CCceEEEecCCChHHHHHHHhhcCCCEEEeCC
Confidence 998876 366665553 2333333333 32211 1233556799999999999986 78999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCC-CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPY-EIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~-D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
..|||+++++||||| |.|+|+|..+|..+.+.+ |++++|. |++++|++|.++++++...++++.++.....
T Consensus 319 ~~Eg~p~~llEAma~-----G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~ 393 (407)
T cd04946 319 ESEGLPVSIMEAMSF-----GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWE 393 (407)
T ss_pred ccccccHHHHHHHHc-----CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999999999 677899999999888854 6888764 8999999999999976666666655555555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 394 ~~f~ 397 (407)
T cd04946 394 ENFN 397 (407)
T ss_pred HHcC
Confidence 5555
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-17 Score=204.42 Aligned_cols=189 Identities=15% Similarity=0.106 Sum_probs=137.8
Q ss_pred eEEEEEEeecccCchhhhhhhccch---hhhc---cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEE
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAP---RVID---TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIA 383 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~---~~~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig 383 (1460)
...+|.++|+|||.+.|.+...... .... .+.++|++|||+++.||+..+++||.++++++|++ .|+++|
T Consensus 480 ~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~----~LvIvG 555 (694)
T PRK15179 480 DERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKV----RFIMVG 555 (694)
T ss_pred ChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCe----EEEEEc
Confidence 3457889999999988753221111 1111 34678999999999999999999999999999875 366666
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccC
Q psy775 384 VPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQIN 463 (1460)
Q Consensus 384 ~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~ 463 (1460)
.+ +. ++++++++.+.+. ...+.|.|.. +++..+|+.||++|+||.+|||+++++|||||
T Consensus 556 ~G-----~~----~~~L~~l~~~lgL-------~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~--- 614 (694)
T PRK15179 556 GG-----PL----LESVREFAQRLGM-------GERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFS--- 614 (694)
T ss_pred cC-----cc----hHHHHHHHHHcCC-------CCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHc---
Confidence 42 22 2344444444332 2446677875 46889999999999999999999999999999
Q ss_pred CCCCeEEEcCCCCchhcccc---cEEECCCCH--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 464 EPPGVLIVSPFAGAGEQMHE---ALICNPYEI--DAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 464 ~~~GvlVlSe~aGaa~~L~~---allVNP~D~--~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+.|+|+|..+|..+.+.+ |++|+|.|. ++++++|.+++.........+.++......+++
T Consensus 615 --G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS 679 (694)
T PRK15179 615 --GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFS 679 (694)
T ss_pred --CCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCC
Confidence 677899999888888843 899998875 689999988887655444455444444445555
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-16 Score=205.11 Aligned_cols=334 Identities=13% Similarity=0.092 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhc-CcCceEEEEeeCC-CCCccccccCccHHHHHhh
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ-NLKFKLGFFLHIP-FPPWDIFRLFPWSDEILQG 623 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~-~~~~kigfFLHiP-fP~~e~fr~lP~r~eIL~~ 623 (1460)
|+..+++.+... + ...|+|-.||||--++|.+++...... ....++.+..|-. |. ...+-.+
T Consensus 695 F~~Aale~l~~~---~---~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~~----------~n~lk~~ 758 (1036)
T PLN02316 695 FCHAALEFLLQS---G---FHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFG----------ANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHhc---C---CCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccc----------hhHHHHH
Confidence 566666654322 1 234899999999999999887543211 2346788888853 21 1123356
Q ss_pred cccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccc
Q psy775 624 MLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVD 703 (1460)
Q Consensus 624 LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~ 703 (1460)
+..||.|---++.|++..+.. . ....+..++.++|+|||++.|.+......... .+
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----------~----~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~---------y~ 814 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----------S----AIAPHLYKFHGILNGIDPDIWDPYNDNFIPVP---------YT 814 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----------c----CcccccCCEEEEECCccccccCCccccccccc---------CC
Confidence 678898887788777664431 0 01123457889999999988865321100000 00
Q ss_pred ccccc--hh-hHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEE
Q psy775 704 RLDYT--KG-LIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL 780 (1460)
Q Consensus 704 ~~~~~--~~-~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLv 780 (1460)
..+.. |. ..+.+|+++|++ ..+.++|++||||.+.||+..+++|+.++++.. +.||
T Consensus 815 ~~~~~~gK~~~k~~Lr~~lGL~---------------~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~------~qlV 873 (1036)
T PLN02316 815 SENVVEGKRAAKEALQQRLGLK---------------QADLPLVGIITRLTHQKGIHLIKHAIWRTLERN------GQVV 873 (1036)
T ss_pred chhhhhhhhhhHHHHHHHhCCC---------------cccCeEEEEEeccccccCHHHHHHHHHHHhhcC------cEEE
Confidence 00000 00 013455555543 135789999999999999999999999998632 4566
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 781 QIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 781 qi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
.+|.+. + ..+++++.+++.+++..+. ..+.|.+..+......+|++||+||+||..|||||+.+|||+|
T Consensus 874 IvG~Gp--d----~~~e~~l~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~ 942 (1036)
T PLN02316 874 LLGSAP--D----PRIQNDFVNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY 942 (1036)
T ss_pred EEeCCC--C----HHHHHHHHHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc
Confidence 566432 1 1456778888887765432 1244555555544457999999999999999999999999999
Q ss_pred ccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccce
Q psy775 861 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEA 940 (1460)
Q Consensus 861 ~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~a 940 (1460)
+.|+|+|..+|..++. .+.+.+.... +..| ....+
T Consensus 943 -----GtppVvs~vGGL~DtV------~d~d~~~~~~-------------------------------~~~g---~~~tG 977 (1036)
T PLN02316 943 -----GSIPVVRKTGGLFDTV------FDVDHDKERA-------------------------------QAQG---LEPNG 977 (1036)
T ss_pred -----CCCeEEEcCCCcHhhc------cccccccccc-------------------------------cccc---cCCce
Confidence 6789999999988822 1111000000 0011 01357
Q ss_pred EEeCCCCHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 941 LICNPYEIDAAAEVIHRALTMPEDERTL-RMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 941 llVnP~d~~~iA~ai~~aL~m~~~er~~-r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++++|.|+++++++|.+||......+.. +..........+++..-+++.++-+..+
T Consensus 978 flf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 978 FSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred EEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999874333332 2222222235578888777776655443
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-16 Score=190.26 Aligned_cols=185 Identities=16% Similarity=0.197 Sum_probs=132.1
Q ss_pred CCCEEEEEEcC-ccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdR-Ld~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.++++|+++|| +.+.||+...++|+.++.+++|++ .|+.+|......+..........+++.++++.+.+.
T Consensus 209 ~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~----~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---- 280 (396)
T cd03818 209 PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDA----RVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---- 280 (396)
T ss_pred CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCc----EEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc----
Confidence 56789999998 999999999999999999888875 577777532111000000001112223333332211
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+.+.|.|.++++++.++|+.||++++||..||+|++.+||||| +.|+|+|..+|..+.+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-----G~PVIas~~~g~~e~i---------------- 339 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-----GCLVVGSDTAPVREVI---------------- 339 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-----CCCEEEcCCCCchhhc----------------
Confidence 2366789999999999999999999999999999999999999 7899999988876611
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
.++ ..+++++|.|++++|++|.++++++...++++.+ .++++
T Consensus 340 -----------------------------~~~--------~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~-ar~~~ 381 (396)
T cd03818 340 -----------------------------TDG--------ENGLLVDFFDPDALAAAVIELLDDPARRARLRRA-ARRTA 381 (396)
T ss_pred -----------------------------ccC--------CceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHH-HHHHH
Confidence 111 3468999999999999999999887554554444 45555
Q ss_pred Hh-cCHHHHHHHHH
Q psy775 978 KV-HDVNYWMRSFL 990 (1460)
Q Consensus 978 ~~-~~~~~W~~~~l 990 (1460)
.+ +++...+++++
T Consensus 382 ~~~fs~~~~~~~~~ 395 (396)
T cd03818 382 LRYDLLSVCLPRQL 395 (396)
T ss_pred HHhccHHHHHHHHh
Confidence 55 66655555543
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-16 Score=178.00 Aligned_cols=268 Identities=23% Similarity=0.220 Sum_probs=187.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccc----cCCCcHHHHhhhccCceeeeccHHhHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR----LFPWSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr----~LP~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
..|+|++|+++...+...+.+ ..+.++.+.+|-+++...... ...........+..+|.+-+.+......+
T Consensus 85 ~~Dii~~~~~~~~~~~~~~~~-----~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 159 (374)
T cd03801 85 RFDVVHAHDWLALLAAALAAR-----LLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREEL 159 (374)
T ss_pred CCcEEEEechhHHHHHHHHHH-----hcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHH
Confidence 479999999998887763332 236889999998887543221 11112222333344677777776655554
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh--ccCCeEEEEecCccccCCHHHHHHHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI--DTKQKIVLGVDRLDYTKGLVHRLKAFE 364 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~--~~~~kvIL~VgRLd~~KGI~~lL~Af~ 364 (1460)
.+. +.....++.++|+|+|...+........... ..+++.++++||+.+.||+..+++|+.
T Consensus 160 ~~~-----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 160 REL-----------------GGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred Hhc-----------------CCCCCCcEEEecCcccccccCccchHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 441 1111247788999999887753210000001 145678999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEc
Q psy775 365 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 444 (1460)
Q Consensus 365 ~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vvp 444 (1460)
.+.+++|+ +.++.+| +++....+++.+ .+.+. .+.+.+.|.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~----~~l~i~G-----~~~~~~~~~~~~----~~~~~-------~~~v~~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPD----VRLVIVG-----DGPLREELEALA----AELGL-------GDRVTFLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCC----eEEEEEe-----CcHHHHHHHHHH----HHhCC-------CcceEEEeccChhhHHHHHHhcCEEEec
Confidence 99888765 4466666 222333333332 22221 2234556999999999999999999999
Q ss_pred cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 445 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 445 SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
|..||+|++++|||+| |.|+|++..+|..+.+. .|+++++.|+++++++|.++++.+...++...++.....
T Consensus 283 ~~~~~~~~~~~Ea~~~-----g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHc-----CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 9999999999999999 67789999988888875 389999999999999999999987766666655554555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
..++
T Consensus 358 ~~~~ 361 (374)
T cd03801 358 ERFS 361 (374)
T ss_pred HhcC
Confidence 5555
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=182.06 Aligned_cols=260 Identities=20% Similarity=0.196 Sum_probs=181.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|..+...+..++..+.. ..+..+.+|-+-. +.... ...+...+-.+|.+-..+....+.+.+.
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~vi~~s~~~~~~l~~~- 148 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLG----GIPYSFTAHGKDI----FRSPD-AIDLDEKLARADFVVAISEYNRQQLIRL- 148 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhc----CCCEEEEEecccc----cccCc-hHHHHHHHhhCCEEEECCHHHHHHHHHh-
Confidence 479999997765555555554432 4677777774321 11111 1234444556899988888776665541
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
++....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+++|++++.++.
T Consensus 149 ----------------~~~~~~~~~vi~~~~d~~~~~~~~----~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~ 208 (355)
T cd03799 149 ----------------LGCDPDKIHVVHCGVDLERFPPRP----PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRG 208 (355)
T ss_pred ----------------cCCCcccEEEEeCCcCHHHcCCcc----ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcC
Confidence 112335778899999998876432 011145678999999999999999999999988776
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC---
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR--- 447 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr--- 447 (1460)
|+ +.++.+|... ...++ .+.+.+.+ ..+.+.+.|.++.+++..+|+.||+++.||..
T Consensus 209 ~~----~~l~i~G~~~-----~~~~~----~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~ 268 (355)
T cd03799 209 ID----FRLDIVGDGP-----LRDEL----EALIAELG-------LEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAAD 268 (355)
T ss_pred CC----eEEEEEECCc-----cHHHH----HHHHHHcC-------CCCeEEECCcCChHHHHHHHHhCCEEEecceecCC
Confidence 65 4566666322 11223 33333322 23446678999999999999999999999999
Q ss_pred ---CCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 448 ---DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 448 ---EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
||||++.+|||+| |.|+|+|..+|..+.+. .|++++|.|+++++++|.++++++...++++.++.....
T Consensus 269 ~~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~ 343 (355)
T cd03799 269 GDREGLPVVLMEAMAM-----GLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVE 343 (355)
T ss_pred CCccCccHHHHHHHHc-----CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999999999 67789999877776664 389999999999999999999987665554444433333
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 344 ~~~s 347 (355)
T cd03799 344 EEFD 347 (355)
T ss_pred HhcC
Confidence 4444
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=179.63 Aligned_cols=265 Identities=17% Similarity=0.147 Sum_probs=172.9
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHHHhhh-ccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEILQGM-LGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~eil~gL-L~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|+++............. ..++.+..|--++... ...+ ....+..-+ -.+|.+-..+......+.+
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAG----VPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcC----CCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 479999999997777666654322 5678888886554422 0111 111111111 1345554444433332222
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEEEecCccccCCHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVLGVDRLDYTKGLVHRLKAF 363 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af 363 (1460)
++-...++.++|+|+|...+..........++ .++++++++||+.+.||+..+++|+
T Consensus 154 ------------------~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 ------------------IGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred ------------------cCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 11122456789999998877543322222211 4567899999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
..+.+++|++ .++.+|.+.. ....+.... .+. +..+.+.+.|. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~~----~l~i~G~~~~-----~~~~~~~~~---~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPNA----RLLLVGDGPD-----RANLELLAL---KEL-------GLEDKVILLGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCCe----EEEEecCCcc-----hhHHHHHHH---Hhc-------CCCceEEEccc--cccHHHHHHhCCEEEe
Confidence 9998887764 4665654321 111211111 011 12233445563 5678999999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc-cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~-allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||..||+|++++|||+| |.|+|+|..+|..+.+.+ |+++++.|+++++++|.+++++++..++...++......
T Consensus 275 ps~~e~~~~~~~Ea~a~-----g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMAC-----GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhc-----CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 99999999999999999 677899999888887765 999999999999999999999875555554444444444
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
.++
T Consensus 350 ~~s 352 (365)
T cd03807 350 NFS 352 (365)
T ss_pred hCC
Confidence 455
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.8e-17 Score=195.67 Aligned_cols=183 Identities=14% Similarity=0.227 Sum_probs=131.7
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHH--HhCCCCCCCEEEEEEEcCCCCChhHH----HHHHHHHHHHHHHHhccCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLL--EKHPEHLEKVTLLQIAVPSRTDVKEY----QDLKEEMDQLVGRINGRFT 812 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL--~~~P~~~~kVvLvqi~~psr~~~~~y----~~l~~el~~lv~~IN~~~~ 812 (1460)
.++++|++|||+++.||+..+++||.++. ++.| ++++ .+|.+ .+.+.+ .++.+++..++++++
T Consensus 246 ~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~----~l~l-i~G~g--~~~~~l~~~~~~~~~~~~~~~~~~~---- 314 (439)
T TIGR02472 246 PEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA----NLVL-VLGCR--DDIRKMESQQREVLQKVLLLIDRYD---- 314 (439)
T ss_pred cCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc----cEEE-EeCCc--cccccccHHHHHHHHHHHHHHHHcC----
Confidence 46789999999999999999999998642 2223 2332 23322 111112 123334445555432
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHHc----cEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcC
Q psy775 813 TPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN 888 (1460)
Q Consensus 813 ~~~~~pvv~~~g~v~~eel~Aly~~A----Dv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vn 888 (1460)
+...+.|.|.++.+++.++|+.| |+||.||.+|||+++++||||| +.|+|+|..+|..+++.
T Consensus 315 ---l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~-----G~PvV~s~~gg~~eiv~------ 380 (439)
T TIGR02472 315 ---LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC-----GLPIVATDDGGPRDIIA------ 380 (439)
T ss_pred ---CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh-----CCCEEEeCCCCcHHHhc------
Confidence 23347788999999999999988 9999999999999999999999 78999999998777211
Q ss_pred cccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHH
Q psy775 889 PYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTL 968 (1460)
Q Consensus 889 P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~ 968 (1460)
+ -.++++|+|.|++++|++|.++++++...+++
T Consensus 381 ---------------------------------------~--------~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~ 413 (439)
T TIGR02472 381 ---------------------------------------N--------CRNGLLVDVLDLEAIASALEDALSDSSQWQLW 413 (439)
T ss_pred ---------------------------------------C--------CCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 1 13568999999999999999999876655555
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 969 RMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 969 r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
..++.......++++.-++++++-|
T Consensus 414 ~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 414 SRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 5554444456778888777776544
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-16 Score=182.23 Aligned_cols=269 Identities=19% Similarity=0.170 Sum_probs=173.8
Q ss_pred CCCEEEEeCc-chh--HHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDY-HLM--LAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDY-hL~--llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
..|+|.+|+. .++ .....+.... ...+.++.+.+|-+.|....+. .....-.-+-.+|.|-+.+.+.++++.
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~ 150 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLL--RGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELLRALL 150 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHH--hhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHHHHHH
Confidence 4689999872 221 1111111110 1246899999998622221111 111222233458888888755555554
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-cCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-TKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
... ...++.++|+|+|...+...... ..... .++++++++||+.+.||+..+++|++++
T Consensus 151 ~~~-------------------~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~ 210 (366)
T cd03822 151 LRA-------------------YPEKIAVIPHGVPDPPAEPPESL-KALGGLDGRPVLLTFGLLRPYKGLELLLEALPLL 210 (366)
T ss_pred hhc-------------------CCCcEEEeCCCCcCcccCCchhh-HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHH
Confidence 410 03467889999998766543221 11111 5678899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
.+++|++ .|+.+|...... . .......+++.+.+.. ..|.+..+.++.+++..+|+.||++++||.
T Consensus 211 ~~~~~~~----~l~i~G~~~~~~-~---~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~ 276 (366)
T cd03822 211 VAKHPDV----RLLVAGETHPDL-E---RYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVVLPYR 276 (366)
T ss_pred HhhCCCe----EEEEeccCccch-h---hhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEEeccc
Confidence 9887765 466666432111 1 1111100222222211 124444344999999999999999999999
Q ss_pred CC--CCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 447 RD--GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 447 rE--GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
.| |++++++||||| |.|+|+|..+| .+++. .|++++|.|+++++++|.++++++....+++ +..++.+
T Consensus 277 ~e~~~~~~~~~Ea~a~-----G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~-~~~~~~~ 349 (366)
T cd03822 277 SADQTQSGVLAYAIGF-----GKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQALR-ARAREYA 349 (366)
T ss_pred ccccccchHHHHHHHc-----CCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHH-HHHHHHH
Confidence 99 999999999999 67779999888 66663 3899999999999999999999766555544 4445555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 350 ~~~s 353 (366)
T cd03822 350 RAMS 353 (366)
T ss_pred hhCC
Confidence 5555
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.8e-16 Score=175.93 Aligned_cols=265 Identities=21% Similarity=0.208 Sum_probs=182.4
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
.-|+|++|......+...+..+. .+.++.+..|-+++....... ..+......+-.+|.+-+.+......+.+..
T Consensus 93 ~~dii~~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 93 RPDLIHAHFAYPDGFAAALLKRK----LGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred CCCEEEEeccchHHHHHHHHHHh----cCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 47999999555444433332221 246788888876654332221 2233444455568999998887766665410
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchh-hhc-cCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR-VID-TKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~-~~~-~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
....++.++|+|+|.+.+.+....... ... .+++.++++||+.+.||+..+++|+..+.+
T Consensus 168 ------------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~ 229 (377)
T cd03798 168 ------------------IDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK 229 (377)
T ss_pred ------------------CCCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh
Confidence 123467789999998877643221110 111 467889999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++|+. .++.+|.+ +....+++.++ +. +..+.+.+.|.++++++..+|+.||+++.||..|
T Consensus 230 ~~~~~----~l~i~g~~-----~~~~~~~~~~~----~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~ 289 (377)
T cd03798 230 KRPDV----HLVIVGDG-----PLREALEALAA----EL-------GLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLRE 289 (377)
T ss_pred cCCCe----EEEEEcCC-----cchHHHHHHHH----hc-------CCcceEEEeCCCCHHHHHHHHHhcCeeecchhhc
Confidence 76654 45555532 22222332222 22 2234456679999999999999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|++++|||+| |.|+|+|+.+|..+.+.. |++++|.|+++++++|.++++++.. +...+........++
T Consensus 290 ~~~~~~~Ea~~~-----G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s 362 (377)
T cd03798 290 GFGLVLLEAMAC-----GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFS 362 (377)
T ss_pred cCChHHHHHHhc-----CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhh
Confidence 999999999999 677899998888777743 6899999999999999999998765 333344444444444
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-16 Score=204.66 Aligned_cols=190 Identities=15% Similarity=0.153 Sum_probs=143.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHH----HHHHHHHHHHHHHHhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY----QDLKEEMDQLVGRINGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y----~~l~~el~~lv~~IN~~~~~~ 814 (1460)
+++++|++|||+++.||+..+|+||..+.+..+.. ++++ .+|... +.++. .....++.+++.+.+-
T Consensus 477 pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li~~lgL----- 546 (1050)
T TIGR02468 477 PRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLIDKYDL----- 546 (1050)
T ss_pred CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHHHHhCC-----
Confidence 57789999999999999999999999986543321 2333 344321 11111 1234456666655443
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHc----cEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 815 NWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~A----Dv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
...+.|.|.++++++.++|+.| ||||.||.+||||++++||||| +.|+|+|..+|..+.+
T Consensus 547 --~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc-----GlPVVASdvGG~~EII--------- 610 (1050)
T TIGR02468 547 --YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPMVATKNGGPVDIH--------- 610 (1050)
T ss_pred --CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----CCCEEEeCCCCcHHHh---------
Confidence 2347788999999999999998 6999999999999999999999 7899999998877611
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
.++ .++++|+|.|++++|++|.++|+.+...++.+.
T Consensus 611 ------------------------------------~~g--------~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~ 646 (1050)
T TIGR02468 611 ------------------------------------RVL--------DNGLLVDPHDQQAIADALLKLVADKQLWAECRQ 646 (1050)
T ss_pred ------------------------------------ccC--------CcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHH
Confidence 111 356999999999999999999987665555555
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHhhhhhc
Q psy775 971 NYLRKREKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 971 ~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
++ ++.+..+++...++++++.+......
T Consensus 647 ~g-r~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 647 NG-LKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred HH-HHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 54 56678899999999999888876643
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=193.50 Aligned_cols=165 Identities=11% Similarity=0.091 Sum_probs=125.0
Q ss_pred eEEEEEEeecccCchhhhhhhccchhh----hc---cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAPRV----ID---TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQI 382 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~~~----~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqi 382 (1460)
...++.++|+|||++.|.+........ .. .+.++|.+|+|+.+.||...+|+|+.++++++|++ .|+++
T Consensus 360 p~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdi----rLvIV 435 (578)
T PRK15490 360 EAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPAT----RFVLV 435 (578)
T ss_pred CHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCe----EEEEE
Confidence 345788999999998887643211111 11 34568899999999999999999999999988875 46666
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeecc
Q psy775 383 AVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQI 462 (1460)
Q Consensus 383 g~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~ 462 (1460)
|. ++.. +++++++.+.+. ..-+.|.|. .+++..+|+.||+||+||.+||||++++|||||
T Consensus 436 Gd-----G~~~----eeLk~la~elgL-------~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~-- 495 (578)
T PRK15490 436 GD-----GDLR----AEAQKRAEQLGI-------LERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMV-- 495 (578)
T ss_pred eC-----chhH----HHHHHHHHHcCC-------CCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHh--
Confidence 63 3322 344444444332 233556676 568899999999999999999999999999999
Q ss_pred CCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHH
Q psy775 463 NEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHR 501 (1460)
Q Consensus 463 ~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~ 501 (1460)
|.|+|+|..+|..+.+. .|++|+|.|++++++++..
T Consensus 496 ---GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~l 534 (578)
T PRK15490 496 ---GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRY 534 (578)
T ss_pred ---CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHH
Confidence 67789999998888774 3999999999999888744
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=195.09 Aligned_cols=343 Identities=16% Similarity=0.140 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCC---ccccc--cCccHHH
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPP---WDIFR--LFPWSDE 619 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~---~e~fr--~lP~r~e 619 (1460)
|+.++++.+.....+ ...|+|-.||||--++|.+++. ......+..+..|.- |.. ...+. .++...-
T Consensus 117 f~~a~~~~~~~~~~~----~~pDIiH~Hdw~~~l~~~~l~~---~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~ 189 (485)
T PRK14099 117 LARAAAAIGQGLVPG----FVPDIVHAHDWQAGLAPAYLHY---SGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAF 189 (485)
T ss_pred HHHHHHHHHhhhccC----CCCCEEEECCcHHHHHHHHHHh---CCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHc
Confidence 666666654322111 1238999999999999988862 122446788899963 211 00000 0110000
Q ss_pred HHhhcccCceeecccHhHHHHHHHHHHHHhCc-eeeCCCcEEEEC---------CeEEEEEEeeCCCChhHHhHHHhcCc
Q psy775 620 ILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC-RVDRKNLLVEHG---------GRTVRIRPLPIAIPYERFVQLAQAAP 689 (1460)
Q Consensus 620 IL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~-~~~~~~~~i~~~---------Gr~v~V~v~PiGID~~~f~~~~~~~~ 689 (1460)
-..++... ..-.+.+..+..|++++.. +.....+.-.+. -+..++.++|+|||++.|.+.....
T Consensus 190 ~~~~~~~~-----~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~- 263 (485)
T PRK14099 190 SLDGVEYY-----GGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDEL- 263 (485)
T ss_pred CchhhhhC-----CCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccch-
Confidence 00000000 0112234444444444321 111111100111 1356789999999999887532210
Q ss_pred cccccchhhhccccccccc-hh-hHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHH
Q psy775 690 RVIDTKQKIVLGVDRLDYT-KG-LIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 767 (1460)
Q Consensus 690 ~~~~~~~~~~~g~~~~~~~-~~-~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL 767 (1460)
.. .+ .+..+.. |. ..+.+|+++|++ ...+..++++|||+.+.||+..+++|+.+++
T Consensus 264 -~~-~~------~~~~~~~~k~~~k~~l~~~~gl~--------------~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~ 321 (485)
T PRK14099 264 -IA-AT------YDVETLAARAANKAALQARFGLD--------------PDPDALLLGVISRLSWQKGLDLLLEALPTLL 321 (485)
T ss_pred -hh-hc------CChhHHHhHHHhHHHHHHHcCCC--------------cccCCcEEEEEecCCccccHHHHHHHHHHHH
Confidence 00 00 0000000 00 013445555433 0124578889999999999999999999987
Q ss_pred HhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH-HccEEEECCC
Q psy775 768 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR-DAAVALVTPL 846 (1460)
Q Consensus 768 ~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~-~ADv~vvtSl 846 (1460)
++ + +.|+.+|.+. + .+++++++++.+... .++++.|. .+++..+|. .||+||+||.
T Consensus 322 ~~--~----~~lvivG~G~----~---~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~ 378 (485)
T PRK14099 322 GE--G----AQLALLGSGD----A---ELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVPSR 378 (485)
T ss_pred hc--C----cEEEEEecCC----H---HHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCc
Confidence 53 2 4566666532 1 345566666554321 24456665 678888774 6999999999
Q ss_pred ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeE
Q psy775 847 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLI 926 (1460)
Q Consensus 847 rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i 926 (1460)
+||||++.+|||+| +.|+|+|..+|..+.+ .+.+ +.
T Consensus 379 ~E~fGl~~lEAma~-----G~ppVvs~~GGl~d~V------~~~~--~~------------------------------- 414 (485)
T PRK14099 379 FEPCGLTQLCALRY-----GAVPVVARVGGLADTV------VDAN--EM------------------------------- 414 (485)
T ss_pred cCCCcHHHHHHHHC-----CCCcEEeCCCCcccee------eccc--cc-------------------------------
Confidence 99999999999999 6688889998887711 0100 00
Q ss_pred eccccCCcccccceEEeCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 927 VSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL---TMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 927 ~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL---~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
.|..| -..+++|+|.|++++|++|.+|+ +.+...++.+.+++ ...++++.-+++.++-+.+...
T Consensus 415 -~~~~~----~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 415 -AIATG----VATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred -ccccC----CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHHHh
Confidence 00011 02469999999999999999853 34433333443332 3567888888887766666543
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.3e-16 Score=178.88 Aligned_cols=252 Identities=21% Similarity=0.249 Sum_probs=170.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcH----------HHHhhhccCceeeeccH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSD----------EILQGMLGCDMVGFHIE 280 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~----------eil~gLL~aDlIgF~t~ 280 (1460)
..|+|.+|+...+........+ ..+.++.+.+|.+|+.. ....+... .....+..||.+-..+.
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVAR----KLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHH----HcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence 4689999987544333332221 23678999999887632 22222111 11122334677766666
Q ss_pred HhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhh--h-ccCCeEEEEecCccccCCHH
Q psy775 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV--I-DTKQKIVLGVDRLDYTKGLV 357 (1460)
Q Consensus 281 ~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~--~-~~~~kvIL~VgRLd~~KGI~ 357 (1460)
.....+.+ .+...++.++|+|+|...+........+. . ..+++.++++||+.+.||+.
T Consensus 158 ~~~~~~~~-------------------~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~ 218 (374)
T cd03817 158 KIADLLRE-------------------YGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNID 218 (374)
T ss_pred HHHHHHHh-------------------cCCCCceEEcCCccchhccCccchhHHHHhcCCCCCCeEEEEEeeeecccCHH
Confidence 54333322 11223478899999988776542211110 1 14567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
.+++|+.++.++.|++ .++.+|.+ +.. .++.+++.+.+. .+.+.+.|.++++++..+|+.
T Consensus 219 ~l~~~~~~~~~~~~~~----~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ 278 (374)
T cd03817 219 FLIRAFARLLKEEPDV----KLVIVGDG-----PER----EELEELARELGL-------ADRVIFTGFVPREELPDYYKA 278 (374)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeCC-----chH----HHHHHHHHHcCC-------CCcEEEeccCChHHHHHHHHH
Confidence 9999999998876654 46666532 222 223333333221 233556799999999999999
Q ss_pred ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 438 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 438 ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
||++++||..||+|++.+|||+| |.|+|+|..+|..+.+.+ |+++++.|. +++++|.++++++...++++
T Consensus 279 ad~~l~~s~~e~~~~~~~Ea~~~-----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~ 351 (374)
T cd03817 279 ADLFVFASTTETQGLVLLEAMAA-----GLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLS 351 (374)
T ss_pred cCEEEecccccCcChHHHHHHHc-----CCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHH
Confidence 99999999999999999999999 677799998887777743 899999888 99999999999877654433
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=185.78 Aligned_cols=236 Identities=14% Similarity=0.098 Sum_probs=162.5
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|+.....+..++++.. +...++..+.|..++....+. ...+..+|.+-..+..-...+.+
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~-- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKS---GKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA-- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHh---CCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH--
Confidence 46999999988777777776542 334566667776554432111 11235678877776655444432
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCcc--ccCCHHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLD--YTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd--~~KGI~~lL~Af~~lL~ 368 (1460)
.|. ...++.++|+|+|.+.+..... ...++++++++||+. +.||+..+++|+.++.
T Consensus 151 ---~~~-------------~~~ki~vi~N~id~~~~~~~~~-----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~- 208 (359)
T PRK09922 151 ---RGI-------------SAQRISVIYNPVEIKTIIIPPP-----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT- 208 (359)
T ss_pred ---cCC-------------CHHHEEEEcCCCCHHHccCCCc-----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-
Confidence 111 1235678899999765432111 013467899999996 4699999999998762
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC--CHHHHHHHHHhccEEEEccC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCI--SQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v--~~eeL~aLY~aADV~VvpSl 446 (1460)
+ ++.|+.+|.+ ++.+ ++++++.+.+. ..-+.|.|.+ +.+++..+|+.||++|+||.
T Consensus 209 --~----~~~l~ivG~g-----~~~~----~l~~~~~~~~l-------~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~ 266 (359)
T PRK09922 209 --G----EWQLHIIGDG-----SDFE----KCKAYSRELGI-------EQRIIWHGWQSQPWEVVQQKIKNVSALLLTSK 266 (359)
T ss_pred --C----CeEEEEEeCC-----ccHH----HHHHHHHHcCC-------CCeEEEecccCCcHHHHHHHHhcCcEEEECCc
Confidence 2 3567766632 2222 33444444332 2235566865 45899999999999999999
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcC-CCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe-~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
.||||++++||||| |.|+|+|+ .+|..+.+.+ |++|+|.|++++|++|.++++.+..
T Consensus 267 ~Egf~~~~lEAma~-----G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 267 FEGFPMTLLEAMSY-----GIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred ccCcChHHHHHHHc-----CCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 99999999999999 67789999 7887777743 8999999999999999999997753
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=188.98 Aligned_cols=178 Identities=16% Similarity=0.175 Sum_probs=137.9
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
+...|++|||+.+.||+...++|++++.+++|+ +.|+.+|.+ + +++++++++++.+ ....
T Consensus 221 ~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~G-----~----~~~~l~~~~~~~~-------l~~~ 280 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHVAIEACRQLKEQGVA----FRYRILGIG-----P----WERRLRTLIEQYQ-------LEDV 280 (406)
T ss_pred CCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC----EEEEEEECc-----h----hHHHHHHHHHHcC-------CCCe
Confidence 345689999999999999999999998888876 456666643 2 3355666665543 2345
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCc------cCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLR------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlr------EGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
+.+.|.++++|+..+|+.||++|+||.. ||++++.+||||| +.|+|+|..+|..+.+
T Consensus 281 V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~-----G~PVI~t~~~g~~E~v------------ 343 (406)
T PRK15427 281 VEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAV-----GIPVVSTLHSGIPELV------------ 343 (406)
T ss_pred EEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhC-----CCCEEEeCCCCchhhh------------
Confidence 8889999999999999999999999984 9999999999999 7899999999877621
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH-HHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER-TLRMNY 972 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er-~~r~~~ 972 (1460)
.++ ..+++++|.|++++|++|.+.++++++++ ++..++
T Consensus 344 ---------------------------------~~~--------~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~a 382 (406)
T PRK15427 344 ---------------------------------EAD--------KSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRA 382 (406)
T ss_pred ---------------------------------cCC--------CceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 111 34689999999999999999999555544 444444
Q ss_pred HHhHHHhcCHHHHHHHHHHHHhh
Q psy775 973 LRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 973 ~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
.......++++..++++.+-+.+
T Consensus 383 r~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 383 REKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhh
Confidence 33344668888888887776653
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=194.26 Aligned_cols=317 Identities=13% Similarity=0.154 Sum_probs=183.5
Q ss_pred cccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCC
Q psy775 160 NGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLK 239 (1460)
Q Consensus 160 n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~ 239 (1460)
+.-||..|+- ++...+.++.++-. +--+-|..|.+.++.+ ...+.|++-.||.+--....+||++. ++
T Consensus 105 ~~~lW~~~~i--~s~~~~~d~nea~~-fgy~~~~~i~~~~~~~-----~~~~~dViH~HeWm~g~a~~~lK~~~----~~ 172 (590)
T cd03793 105 KGELWELCGI--GSPEGDRETNDAII-FGFLVAWFLGEFAEQF-----DDEPAVVAHFHEWQAGVGLPLLRKRK----VD 172 (590)
T ss_pred HHHHHHHcCC--CCCCCCCcchHHHH-HHHHHHHHHHHHHhhc-----cCCCCeEEEEcchhHhHHHHHHHHhC----CC
Confidence 4557887764 33333333332211 1113334444444321 11368999999999999999998643 47
Q ss_pred ceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccH--------------HhHHHHHH-----HHHhhcC-ceec
Q psy775 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE--------------DYCLNFVD-----CCQRRLG-CRVD 299 (1460)
Q Consensus 240 ~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~--------------~yar~FL~-----~~~riLg-~~~~ 299 (1460)
++..|..| ..+.-|.|- +.+ .+|+.. -+.++.++ .|++++. ++..
T Consensus 173 VptVfTtH----AT~~GR~l~----------~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it 237 (590)
T cd03793 173 VSTIFTTH----ATLLGRYLC----------AGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEIT 237 (590)
T ss_pred CCEEEEec----ccccccccc----------cCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHH
Confidence 88999999 333333211 111 222210 02223222 2333331 1111
Q ss_pred CCCcEEEECCeEEEEEEeecccCchhhhhhhcc------c----hh-----hhc-----cCCeEEEE-ecCccc-cCCHH
Q psy775 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA------A----PR-----VID-----TKQKIVLG-VDRLDY-TKGLV 357 (1460)
Q Consensus 300 ~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~------~----~~-----~~~-----~~~kvIL~-VgRLd~-~KGI~ 357 (1460)
.... ....++...+ |+|+|+|++.|.+..+. + .+ ..+ .+++++++ +||+++ .||++
T Consensus 238 ~~E~-~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiD 315 (590)
T cd03793 238 AYEA-EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGAD 315 (590)
T ss_pred HHHH-HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHH
Confidence 1111 1223444333 99999999998654310 0 01 111 35678888 899999 99999
Q ss_pred HHHHHHHHHHHhCCC-CCCcEEEEEEEcCCCCC---------hHHHHHHHHHHHHHHHHHhcc-c---------------
Q psy775 358 HRLKAFETLLEKHPE-HLEKVTLLQIAVPSRTD---------VKEYQDLKEEMDQLVGRINGR-F--------------- 411 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~-~~~kvvLvqig~psr~~---------~~ey~~L~~ev~~lv~~IN~~-f--------------- 411 (1460)
.+|+|+.++-..-.. -..+.|+..+..|+... ....+++++.++.+..+|+.+ |
T Consensus 316 vlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~ 395 (590)
T cd03793 316 MFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELL 395 (590)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhc
Confidence 999999988652111 11223444555565532 133455666666666555555 0
Q ss_pred ----------------------------------------------CC-CCcccEEEEcCCCCH------HHHHHHHHhc
Q psy775 412 ----------------------------------------------TT-PNWSPIRYIYGCISQ------DELASFYRDA 438 (1460)
Q Consensus 412 ----------------------------------------------g~-~~~~pIv~~~g~v~~------eeL~aLY~aA 438 (1460)
.. .+-..|+|....++. .+...+|+.|
T Consensus 396 ~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~ 475 (590)
T cd03793 396 DKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC 475 (590)
T ss_pred chhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc
Confidence 00 111123333222221 3466789999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch----hccc----ccEEEC-------CCCHHHHHHHHHHHc
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG----EQMH----EALICN-------PYEIDAAAEVIHRAL 503 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa----~~L~----~allVN-------P~D~~elA~AI~~aL 503 (1460)
|++|+||.+||||++++||||| |.|+|.|..+|.. +.++ .|++|. |.++++++++|.+.+
T Consensus 476 dl~v~PS~yE~fG~~~lEAma~-----G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~ 550 (590)
T cd03793 476 HLGVFPSYYEPWGYTPAECTVM-----GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC 550 (590)
T ss_pred eEEEeccccCCCCcHHHHHHHc-----CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 6778999999883 3333 378887 566789999999988
Q ss_pred CCCHHHH
Q psy775 504 TMPEDER 510 (1460)
Q Consensus 504 ~m~~~er 510 (1460)
.++..++
T Consensus 551 ~~~~r~~ 557 (590)
T cd03793 551 QLSRRQR 557 (590)
T ss_pred CCcHHHH
Confidence 7654333
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=185.59 Aligned_cols=290 Identities=17% Similarity=0.162 Sum_probs=187.3
Q ss_pred ccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceE
Q psy775 163 FWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 242 (1460)
Q Consensus 163 LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~I 242 (1460)
+|+++.+......|+ ...++-+.|-+++.. . ...|+|.+|-.+....+ .++.. ...+.
T Consensus 67 ~~~~~~~~~~~~~f~-----~~~~l~~~~l~~l~~--~---------~~~diii~~~~~~~~~~-~~~~~-----~~~~~ 124 (372)
T cd04949 67 LIILLNYQGEDYFFN-----NEEELFAFFLDELNK--D---------TKPDVFILDRPTLDGQA-LLNMK-----KAAKV 124 (372)
T ss_pred EEEEEEecCceEEEC-----CHHHHHHHHHHHHhc--C---------CCCCEEEECCccccchh-HHhcc-----CCceE
Confidence 677776655444443 223333334443322 0 15788888877766552 33321 24556
Q ss_pred EEEEecCC-CCccccccCC---CcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEee
Q psy775 243 GFFLHIPF-PPWDIFRLFP---WSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLP 318 (1460)
Q Consensus 243 gfFlHiPF-Ps~eifr~LP---~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viP 318 (1460)
..++|... .....-...+ ..+.++..+-.+|.|.+.+..-.+.+.+.. + ...++.++|
T Consensus 125 i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~~----~--------------~~~~v~~ip 186 (372)
T cd04949 125 VVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQF----G--------------NYNPIYTIP 186 (372)
T ss_pred EEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHHh----C--------------CCCceEEEc
Confidence 67777432 1111000111 234566666778988888876666654421 1 111267899
Q ss_pred cccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHH
Q psy775 319 IAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKE 398 (1460)
Q Consensus 319 iGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ 398 (1460)
+|++.+.+.+.. .....+..++++||+.+.||+..+++|+.++.+++|+++ |+.+|.+. ....++.
T Consensus 187 ~g~~~~~~~~~~-----~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g~-----~~~~~~~ 252 (372)
T cd04949 187 VGSIDPLKLPAQ-----FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYGD-----EEEKLKE 252 (372)
T ss_pred ccccChhhcccc-----hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeCc-----hHHHHHH
Confidence 999988765421 011345678999999999999999999999999999863 55566432 1222322
Q ss_pred HHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCC-Cc
Q psy775 399 EMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GA 477 (1460)
Q Consensus 399 ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~a-Ga 477 (1460)
. +.+.+ ....+.+.| ..+++..+|+.||++++||..||||++++|||+| |.|+|+|... |.
T Consensus 253 ~----~~~~~-------~~~~v~~~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-----G~PvI~~~~~~g~ 314 (372)
T cd04949 253 L----IEELG-------LEDYVFLKG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-----GLPVISYDVNYGP 314 (372)
T ss_pred H----HHHcC-------CcceEEEcC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhC-----CCCEEEecCCCCc
Confidence 2 22222 123455667 3567999999999999999999999999999999 6777999876 66
Q ss_pred hhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 478 GEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 478 a~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+.+.+ |++++|.|++++|++|.++++++...++++.++. +...+++
T Consensus 315 ~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~-~~~~~~s 364 (372)
T cd04949 315 SEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAY-ENAERYS 364 (372)
T ss_pred HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHH-HHHHHhh
Confidence 666643 8999999999999999999998755555544443 3344444
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=190.50 Aligned_cols=193 Identities=17% Similarity=0.211 Sum_probs=144.1
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++.+++++||+.+.||+...|+||+++.++.|+-..++.|+.+|.... ++..++.+++++++++.+-. ..
T Consensus 267 ~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~---~~~~~~~~eL~~la~~l~L~-------~~ 336 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN---KEDEERLQKLKDRAKELGLD-------GD 336 (463)
T ss_pred CCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC---cccHHHHHHHHHHHHHcCCC-------Cc
Confidence 456789999999999999999999999876543223467888886521 12223455666666654432 23
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
+.|.|+++.+++.++|+.||+++.||..||||++++||||| +.|+|+|..+|....
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~-----G~PVIa~~~gGp~~e------------------- 392 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA-----GAVPIAHNSAGPKMD------------------- 392 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc-----CCcEEEeCCCCCcce-------------------
Confidence 66789999999999999999999999999999999999999 678999998885430
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
+|.++..| ..+++++ |++++|++|.+++++++++++.-.+..++.+.+
T Consensus 393 -------------------------IV~~~~~g-----~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 393 -------------------------IVLDEDGQ-----QTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred -------------------------eeecCCCC-----cccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 12222112 2345664 999999999999998776665444445677788
Q ss_pred cCHHHHHHHHHHHHhhhhh
Q psy775 980 HDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 980 ~~~~~W~~~~l~~l~~~~~ 998 (1460)
++.+.-.+++.+.+.....
T Consensus 441 FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 441 FSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 9999999999888876543
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.7e-16 Score=181.25 Aligned_cols=290 Identities=17% Similarity=0.166 Sum_probs=189.1
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccc-----cccCccHHH-HHhhcccCceeecccHhHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDI-----FRLFPWSDE-ILQGMLGCDMVGFHIEDYCLNF 641 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~-----fr~lP~r~e-IL~~LL~aDlIGFqt~~yar~F 641 (1460)
|+|..|++...+.+...+ .....+..+.+|-.+|.... ......... ....+-.+|.|-..+....+.+
T Consensus 85 divh~~~~~~~~~~~~~~-----~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~ 159 (388)
T TIGR02149 85 DVVHSHTWYTFLAGHLAK-----KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDI 159 (388)
T ss_pred CeEeecchhhhhHHHHHH-----HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHH
Confidence 688888877655444333 12345677788864332111 000000011 1123345666666655554444
Q ss_pred HHHHHHHhCceeeCCCcEEEE-CCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhc
Q psy775 642 VDCCQRRLGCRVDRKNLLVEH-GGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIA 720 (1460)
Q Consensus 642 L~~c~rlLg~~~~~~~~~i~~-~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~ 720 (1460)
.+. + +-...++.++|+|+|.+.|.+... ...+++++
T Consensus 160 ~~~-----------------~~~~~~~~i~vi~ng~~~~~~~~~~~--------------------------~~~~~~~~ 196 (388)
T TIGR02149 160 LKY-----------------YPDLDPEKVHVIYNGIDTKEYKPDDG--------------------------NVVLDRYG 196 (388)
T ss_pred HHH-----------------cCCCCcceEEEecCCCChhhcCCCch--------------------------HHHHHHhC
Confidence 321 1 112346788999999877643110 12333333
Q ss_pred CchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHH
Q psy775 721 IPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 800 (1460)
Q Consensus 721 i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el 800 (1460)
+ ..++++|+++||+.+.||+..+++|++++. ++ +.++.+|.+... .++.+++
T Consensus 197 ~----------------~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~----~~l~i~g~g~~~-----~~~~~~~ 248 (388)
T TIGR02149 197 I----------------DRSRPYILFVGRITRQKGVPHLLDAVHYIP---KD----VQVVLCAGAPDT-----PEVAEEV 248 (388)
T ss_pred C----------------CCCceEEEEEcccccccCHHHHHHHHHHHh---hc----CcEEEEeCCCCc-----HHHHHHH
Confidence 2 256778999999999999999999999873 23 345555533211 1344556
Q ss_pred HHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchh
Q psy775 801 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 880 (1460)
Q Consensus 801 ~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~ 880 (1460)
++.+.+.+... ..++++.+.++.+++..+|+.||++++||..||||++.+|||+| +.|+|+|..+|..+.
T Consensus 249 ~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~-----G~PvI~s~~~~~~e~ 318 (388)
T TIGR02149 249 RQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMAC-----GTPVVASATGGIPEV 318 (388)
T ss_pred HHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHc-----CCCEEEeCCCCHHHH
Confidence 65555554321 23677788999999999999999999999999999999999999 789999998886662
Q ss_pred hhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCH------HHHHHH
Q psy775 881 MHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEI------DAAAEV 954 (1460)
Q Consensus 881 L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~------~~iA~a 954 (1460)
+. ++ ..+++++|.|. ++++++
T Consensus 319 i~---------------------------------------------~~--------~~G~~~~~~~~~~~~~~~~l~~~ 345 (388)
T TIGR02149 319 VV---------------------------------------------DG--------ETGFLVPPDNSDADGFQAELAKA 345 (388)
T ss_pred hh---------------------------------------------CC--------CceEEcCCCCCcccchHHHHHHH
Confidence 11 01 24688999998 999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 955 IHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 955 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
|.+.++.+...++++.+.......+++++.+++++++.+.+.
T Consensus 346 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 346 INILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999998655545555555444456789999999988777653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-15 Score=178.71 Aligned_cols=287 Identities=22% Similarity=0.243 Sum_probs=191.8
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCc--ccccc---Ccc--HHHHHhhcccCceeecccHhHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPW--DIFRL---FPW--SDEILQGMLGCDMVGFHIEDYCLN 640 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~--e~fr~---lP~--r~eIL~~LL~aDlIGFqt~~yar~ 640 (1460)
|+|-+|++........+. .....+..+..|...... ..... .+. ...-...+..+|.|.+.+......
T Consensus 103 Div~~~~~~~~~~~~~~~-----~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 103 DLIHAHYWDSGLVALLLA-----RRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred cEEEEecCccchHHHHHH-----hhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 788888876555444443 123456777777642211 11100 001 111123456789998888876666
Q ss_pred HHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhc
Q psy775 641 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIA 720 (1460)
Q Consensus 641 FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~ 720 (1460)
+.+.- .....++.++|+|+|.+.|...... ...++.++
T Consensus 178 ~~~~~-----------------~~~~~~~~vi~ng~~~~~~~~~~~~-------------------------~~~~~~~~ 215 (398)
T cd03800 178 LYSLY-----------------GAYPRRIRVVPPGVDLERFTPYGRA-------------------------EARRARLL 215 (398)
T ss_pred HHHHc-----------------cccccccEEECCCCCccceecccch-------------------------hhHHHhhc
Confidence 54321 1122237889999998776432110 00011111
Q ss_pred CchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHH
Q psy775 721 IPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 800 (1460)
Q Consensus 721 i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el 800 (1460)
...++++|+++||+++.||+...++|+.++.+++|+ +.|+.+|.......+ ....++
T Consensus 216 ----------------~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~---~~~~~~ 272 (398)
T cd03800 216 ----------------RDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRER----ANLVIVGGPRDDILA---MDEEEL 272 (398)
T ss_pred ----------------cCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCC----eEEEEEECCCCcchh---hhhHHH
Confidence 125678999999999999999999999999888776 467777765433222 223345
Q ss_pred HHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchh
Q psy775 801 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 880 (1460)
Q Consensus 801 ~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~ 880 (1460)
+.++.+.+.. +-+.+.|.++.+++..+|+.||++++||..||++++.+|||+| +.|+|+|+.+|..+.
T Consensus 273 ~~~~~~~~~~-------~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~-----G~Pvi~s~~~~~~e~ 340 (398)
T cd03800 273 RELARELGVI-------DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC-----GLPVVATAVGGPRDI 340 (398)
T ss_pred HHHHHhcCCC-------ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhc-----CCCEEECCCCCHHHH
Confidence 5555544322 3477889999999999999999999999999999999999999 779999998886661
Q ss_pred hhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhC
Q psy775 881 MHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT 960 (1460)
Q Consensus 881 L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~ 960 (1460)
+ .+ ...+++++|.|+++++++|.++++
T Consensus 341 i---------------------------------------------~~--------~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 341 V---------------------------------------------VD--------GVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred c---------------------------------------------cC--------CCCeEEeCCCCHHHHHHHHHHHHh
Confidence 1 11 134689999999999999999998
Q ss_pred CCHHHHHHHHHHHHhHH-HhcCHHHHHHHHH
Q psy775 961 MPEDERTLRMNYLRKRE-KVHDVNYWMRSFL 990 (1460)
Q Consensus 961 m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 990 (1460)
++...++...+. ++++ +.++++.++++++
T Consensus 368 ~~~~~~~~~~~a-~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 DPALRRRLSRAG-LRRARARYTWERVAARLL 397 (398)
T ss_pred CHHHHHHHHHHH-HHHHHHhCCHHHHHHHHh
Confidence 765545555444 4555 7889888888765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=187.48 Aligned_cols=179 Identities=18% Similarity=0.238 Sum_probs=130.8
Q ss_pred eecccCchhhhhhhccchhhhc------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCCh
Q psy775 317 LPIAIPYERFVQLAQAAPRVID------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDV 390 (1460)
Q Consensus 317 iPiGID~~~f~~~~~~~~~~~~------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~ 390 (1460)
+|.|||.+.|.+.....+..++ .+..++++|||+++.||+..+++|++++.+++|++..++.++.+|.
T Consensus 118 I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------ 191 (335)
T PHA01633 118 VFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------ 191 (335)
T ss_pred eeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------
Confidence 5679999988753211111111 4567889999999999999999999999999998866677765541
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcccEEEEc--CCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCe
Q psy775 391 KEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY--GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 468 (1460)
Q Consensus 391 ~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~--g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gv 468 (1460)
. .+ .+ .+. . ..|.+.. |.++.+++.++|++||++|+||..||||++++||||| |.|
T Consensus 192 ~---~~----~~----l~l----~--~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~-----G~P 249 (335)
T PHA01633 192 K---QF----TQ----LEV----P--ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM-----GTP 249 (335)
T ss_pred H---HH----HH----cCC----C--CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----CCC
Confidence 1 11 11 110 1 1244432 6778999999999999999999999999999999999 677
Q ss_pred EEEcCCCCchhcccc---------------------cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 469 LIVSPFAGAGEQMHE---------------------ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 469 lVlSe~aGaa~~L~~---------------------allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+|+|..+|..+..++ |..++++|++++|++|.+++.+.+.+ .|....++..++++
T Consensus 250 VVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~--~~~~~~~~~a~~f~ 325 (335)
T PHA01633 250 VIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE--ERSMKLKELAKKYD 325 (335)
T ss_pred EEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--hhhHHHHHHHHhcC
Confidence 899988765554321 45788999999999999998776433 23445567777777
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-16 Score=177.54 Aligned_cols=257 Identities=19% Similarity=0.146 Sum_probs=170.2
Q ss_pred CCCEEEEeCcchhHHH-HHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHH----HH-hhhccCceeeeccHHhHH
Q psy775 211 GTPLVWIHDYHLMLAA-NTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDE----IL-QGMLGCDMVGFHIEDYCL 284 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~e----il-~gLL~aDlIgF~t~~yar 284 (1460)
..|+|.+|........ ..+.++ .+.++.+.+|..||.+-.......... +. ...-.+|.+-+.+.....
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARR-----LGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHH-----cCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 4789999976543222 222222 257888899987773322111111111 11 112246666666655444
Q ss_pred HHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh---ccCCeEEEEecCccccCCHHHHHH
Q psy775 285 NFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI---DTKQKIVLGVDRLDYTKGLVHRLK 361 (1460)
Q Consensus 285 ~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~---~~~~kvIL~VgRLd~~KGI~~lL~ 361 (1460)
.+.. ....++.++|+|+|.+.|.+......... ..++++++++||+.+.||+..+++
T Consensus 158 ~~~~--------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 158 ELRA--------------------RGFRRVRLWPRGVDTELFHPRRRDEALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred HHhc--------------------cCCCceeecCCCccccccCcccccHHHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 2111 11135678999999887754322211111 145678999999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEE
Q psy775 362 AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441 (1460)
Q Consensus 362 Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~ 441 (1460)
|+.++.++ |++ .++.+|.. ++...++ ..+ ..| .+.|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~~-----~~~~~~~--------~~~--------~~v-~~~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGDG-----PARARLE--------ARY--------PNV-HFLGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeCC-----chHHHHh--------ccC--------CcE-EEEeccCHHHHHHHHHhCCEE
Confidence 99999876 654 46656632 1111222 011 123 445889999999999999999
Q ss_pred EEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy775 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518 (1460)
Q Consensus 442 VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~ 518 (1460)
++||..||||++++||||| |.|+|+|..+|..+.+.. |++++|.|.++++++|.++++.++...++..+. +
T Consensus 271 l~~s~~e~~~~~~lEa~a~-----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~-~ 344 (364)
T cd03814 271 VFPSRTETFGLVVLEAMAS-----GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA-R 344 (364)
T ss_pred EECcccccCCcHHHHHHHc-----CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-H
Confidence 9999999999999999999 677899999888887753 899999999999999999998776555544433 4
Q ss_pred HHHhhcC
Q psy775 519 KREKHMN 525 (1460)
Q Consensus 519 ~~v~~~~ 525 (1460)
+.+.+++
T Consensus 345 ~~~~~~~ 351 (364)
T cd03814 345 AEAERRS 351 (364)
T ss_pred HHHhhcC
Confidence 4445555
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=175.84 Aligned_cols=252 Identities=17% Similarity=0.144 Sum_probs=169.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
.-|+|++|+.+...+...+... ..++.+..|..++....... +....-..+-.+|.+-+.+......
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~----- 149 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK------IVKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRAL----- 149 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc------cccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHH-----
Confidence 4799999998832333233211 13777888876543221110 1111233344567776666654400
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
.......++.++|+|++...+... ...+++.++++||+.+.||+..+++|+.++.+.+
T Consensus 150 ---------------~~~~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~ 207 (348)
T cd03820 150 ---------------YYKKFNKNVVVIPNPLPFPPEEPS-------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKH 207 (348)
T ss_pred ---------------hhccCCCCeEEecCCcChhhcccc-------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcC
Confidence 011223467889999998766432 1245678999999999999999999999998877
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM 450 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGf 450 (1460)
|++ .|+.+|.. +....+++ ++.+.+ ..+.+.+.|. .+++..+|+.||++++||..|||
T Consensus 208 ~~~----~l~i~G~~-----~~~~~~~~----~~~~~~-------~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~ 265 (348)
T cd03820 208 PDW----KLRIVGDG-----PEREALEA----LIKELG-------LEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGF 265 (348)
T ss_pred CCe----EEEEEeCC-----CCHHHHHH----HHHHcC-------CCCeEEEcCC--cchHHHHHHhCCEEEeCcccccc
Confidence 775 45555532 22222322 333332 2344566676 78999999999999999999999
Q ss_pred CcceeeeeeeccCCCCCeEEEcCCCCchhcc-c---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 451 NLVAKEFVACQINEPPGVLIVSPFAGAGEQM-H---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 451 nLValEamAcq~~~~~GvlVlSe~aGaa~~L-~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|++++|||+| |.|+|+|...|..+.+ . .|+++++.|+++++++|.+++++++..++++.++ ++.+++++
T Consensus 266 ~~~~~Ea~a~-----G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~ 338 (348)
T cd03820 266 PMVLLEAMAF-----GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANA-RESAERFS 338 (348)
T ss_pred CHHHHHHHHc-----CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHHHhC
Confidence 9999999999 6777999876555444 2 4899999999999999999999776655555444 56666666
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-15 Score=179.18 Aligned_cols=180 Identities=17% Similarity=0.243 Sum_probs=139.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+|+++||+++.||+..+++||..+++++|+...++.|+.+|.+. .++++++.+.+.+ +..
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~---------~~~~~~~~~~~~~-------~~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP---------ARGACEQMVRAAG-------LAH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc---------hHHHHHHHHHHcC-------Ccc
Confidence 467899999999999999999999999999999776678888888432 1234444444332 334
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+++.|. .+++..+|+.||+++.||..|||+++.+|||+| +.|+|+|..+|..+.+.
T Consensus 256 ~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~-----G~Pvv~s~~~g~~e~i~---------------- 312 (374)
T TIGR03088 256 LVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS-----GLPVIATAVGGNPELVQ---------------- 312 (374)
T ss_pred eEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-----CCCEEEcCCCCcHHHhc----------------
Confidence 5777774 568999999999999999999999999999999 78999999988776211
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH-
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE- 977 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v- 977 (1460)
++ ..+++++|.|++++|++|.++++.+...+..+.+ .++++
T Consensus 313 -----------------------------~~--------~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~-a~~~~~ 354 (374)
T TIGR03088 313 -----------------------------HG--------VTGALVPPGDAVALARALQPYVSDPAARRAHGAA-GRARAE 354 (374)
T ss_pred -----------------------------CC--------CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH-HHHHHH
Confidence 01 2468999999999999999999865544444444 34554
Q ss_pred HhcCHHHHHHHHHHHHhh
Q psy775 978 KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 978 ~~~~~~~W~~~~l~~l~~ 995 (1460)
..+++...++++.+-+.+
T Consensus 355 ~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 355 QQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 678988888887776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-15 Score=186.93 Aligned_cols=258 Identities=15% Similarity=0.109 Sum_probs=162.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCc-cccccCC-C---cHHHHhhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPW-DIFRLFP-W---SDEILQGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~-eifr~LP-~---r~eil~gLL~aDlIgF~t~~yar~ 285 (1460)
++|+|.++--. ...+..+.. ...+++...+|.-.=+. ..-..-+ | -+..++.+-.+|.|-..|..-.+.
T Consensus 211 ~~di~i~dr~~-~~~~~~~~~-----~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~ 284 (500)
T TIGR02918 211 KKDIIILDRST-GIGQAVLEN-----KGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQI 284 (500)
T ss_pred CCCEEEEcCCc-ccchHHHhc-----CCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHH
Confidence 47877665434 444555543 23689999999532000 0000000 1 112234444456666656543333
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
..+... .+.+...+|.++|+|++.+.+.+. ....+..|++|||+.+.||+..+|+|+.+
T Consensus 285 l~~~~~--------------~~~~~~~ki~viP~g~~~~~~~~~-------~~r~~~~il~vGrl~~~Kg~~~li~A~~~ 343 (500)
T TIGR02918 285 LKNQFK--------------KYYNIEPRIYTIPVGSLDELQYPE-------QERKPFSIITASRLAKEKHIDWLVKAVVK 343 (500)
T ss_pred HHHHhh--------------hhcCCCCcEEEEcCCCcccccCcc-------cccCCeEEEEEeccccccCHHHHHHHHHH
Confidence 222110 122334567889999876544321 01234579999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|++ .|+++|. +++. +++++++.+.+. ...+.+.|.. ++..+|+.||++|+||
T Consensus 344 l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l-------~~~V~f~G~~---~~~~~~~~adv~v~pS 400 (500)
T TIGR02918 344 AKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQA-------QDYIHLKGHR---NLSEVYKDYELYLSAS 400 (500)
T ss_pred HHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEcCCC---CHHHHHHhCCEEEEcC
Confidence 99999975 3555553 2332 334444444322 2335566765 5677899999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCC-Cchhccc---ccEEECC----CC----HHHHHHHHHHHcCCCHHHHHHH
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQMH---EALICNP----YE----IDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~a-Gaa~~L~---~allVNP----~D----~~elA~AI~~aL~m~~~er~~R 513 (1460)
.+||||++++||||| |.|+|+|... |..+.+. .|++|+| .| ++++|++|.++|+ ++..++++
T Consensus 401 ~~Egfgl~~lEAma~-----G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~ 474 (500)
T TIGR02918 401 TSEGFGLTLMEAVGS-----GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFH 474 (500)
T ss_pred ccccccHHHHHHHHh-----CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHH
Confidence 999999999999999 6778999986 6666663 2899974 33 8899999999995 44333333
Q ss_pred HHHHHHHHhhcC
Q psy775 514 MNYLRKREKHMN 525 (1460)
Q Consensus 514 ~~~l~~~v~~~~ 525 (1460)
. ..++..++++
T Consensus 475 ~-~a~~~a~~fs 485 (500)
T TIGR02918 475 E-YSYQIAEGFL 485 (500)
T ss_pred H-HHHHHHHhcC
Confidence 3 3344556655
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.3e-16 Score=187.78 Aligned_cols=334 Identities=17% Similarity=0.210 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhh-cCcCceEEEEeeCCCCCc----c-cccc-Ccc--
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE-QNLKFKLGFFLHIPFPPW----D-IFRL-FPW-- 616 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~-~~~~~kigfFLHiPfP~~----e-~fr~-lP~-- 616 (1460)
|+..+++.+.... ...|+|-.||||-.++|.+++..... .....+..|..|-+.+.. . .... .++
T Consensus 115 f~~~~~~~l~~~~------~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 115 FSRAALELLRRLG------WKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHhcC------CCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 6666666554321 12379999999998888888743211 013568889999752211 0 0000 000
Q ss_pred ------------HHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHH
Q psy775 617 ------------SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQL 684 (1460)
Q Consensus 617 ------------r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~ 684 (1460)
..-.-.++..||.|-.-++.|++..++.- . ...+.-....+..++.++|+|||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-------~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-------F-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-------C-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 01111223344444444444443322110 0 000000012234678999999999888653
Q ss_pred HhcCccccccchhhhccccccccc--hhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHH
Q psy775 685 AQAAPRVIDTKQKIVLGVDRLDYT--KGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKA 762 (1460)
Q Consensus 685 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~A 762 (1460)
.... ... ..+..+.. ....+.+|++++++ ...++++|+++||+.+.||+...++|
T Consensus 261 ~~~~--~~~-------~~~~~~~~~~~~~k~~l~~~~g~~--------------~~~~~~~i~~vGrl~~~Kg~~~li~a 317 (476)
T cd03791 261 TDPH--LPA-------NYSADDLEGKAENKAALQEELGLP--------------VDPDAPLFGFVGRLTEQKGIDLLLEA 317 (476)
T ss_pred ccch--hhh-------cCCccccccHHHHHHHHHHHcCCC--------------cCCCCCEEEEEeeccccccHHHHHHH
Confidence 2210 000 00000000 01113344444432 12577899999999999999999999
Q ss_pred HHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEE
Q psy775 763 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 842 (1460)
Q Consensus 763 fe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~v 842 (1460)
++++.+++ +.|+.+|.+. + .+.+++++++.+... .++++.+ .+.++...+|+.||+++
T Consensus 318 ~~~l~~~~------~~lvi~G~g~----~---~~~~~~~~~~~~~~~--------~v~~~~~-~~~~~~~~~~~~aDv~l 375 (476)
T cd03791 318 LPELLELG------GQLVILGSGD----P---EYEEALRELAARYPG--------RVAVLIG-YDEALAHLIYAGADFFL 375 (476)
T ss_pred HHHHHHcC------cEEEEEecCC----H---HHHHHHHHHHHhCCC--------cEEEEEe-CCHHHHHHHHHhCCEEE
Confidence 99987653 4566666542 1 344556655554311 2344444 45777788999999999
Q ss_pred ECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCC
Q psy775 843 VTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPP 922 (1460)
Q Consensus 843 vtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 922 (1460)
+||..||+|++.+|||+| +.|+|+|..+|..+.+
T Consensus 376 ~pS~~E~~gl~~lEAma~-----G~pvI~~~~gg~~e~v----------------------------------------- 409 (476)
T cd03791 376 MPSRFEPCGLTQMYAMRY-----GTVPIVRATGGLADTV----------------------------------------- 409 (476)
T ss_pred CCCCCCCCcHHHHHHhhC-----CCCCEECcCCCccceE-----------------------------------------
Confidence 999999999999999999 7889999999988721
Q ss_pred ceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCH--HHH-HHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 923 GVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPE--DER-TLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 923 ~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~--~er-~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
.+.... ..-..++++.|.|+++++++|.+++++.. +.+ +.+.+. ....++++.-++++++-+
T Consensus 410 ----~~~~~~--~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y 474 (476)
T cd03791 410 ----IDYNED--TGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA---MAQDFSWDRSAKEYLELY 474 (476)
T ss_pred ----eCCcCC--CCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH---hccCCChHHHHHHHHHHH
Confidence 111100 00125699999999999999999986432 222 222222 123456666666665543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=174.47 Aligned_cols=266 Identities=17% Similarity=0.159 Sum_probs=178.4
Q ss_pred CCCEEEEeC-cchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCc--------HHH-HhhhccCceeeeccH
Q psy775 211 GTPLVWIHD-YHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWS--------DEI-LQGMLGCDMVGFHIE 280 (1460)
Q Consensus 211 ~gDvVwIHD-YhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r--------~ei-l~gLL~aDlIgF~t~ 280 (1460)
..|+|++|. ..+..++.....+. .+.++.+.+|-.||........... ..+ -..+..+|.+-+.+.
T Consensus 99 ~~D~v~~~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 99 RPDVIIATSPPLLIALAALLLARL----KGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred CCCEEEEcCChHHHHHHHHHHHHh----cCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 479999998 44444444443322 2678999999887754322111111 111 123445788888888
Q ss_pred HhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchh--hhc-cCCeEEEEecCccccCCHH
Q psy775 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR--VID-TKQKIVLGVDRLDYTKGLV 357 (1460)
Q Consensus 281 ~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~--~~~-~~~kvIL~VgRLd~~KGI~ 357 (1460)
.....+.. +.....++.++|+|+|...+......... ... .++.+++++||+.+.||+.
T Consensus 175 ~~~~~~~~------------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~ 236 (394)
T cd03794 175 GMREYLVR------------------RGVPPEKISVIPNGVDLELFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLD 236 (394)
T ss_pred HHHHHHHh------------------cCCCcCceEEcCCCCCHHHcCCccchhhhhhccCCCCcEEEEEecCcccccCHH
Confidence 77766552 11223467889999998877543221110 111 5678899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
.+++|+.++.+. |++ .|+.+|. ++....+++.+. .. +...+.+ .|.++++++..+|+.
T Consensus 237 ~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~~----~~-------~~~~v~~-~g~~~~~~~~~~~~~ 294 (394)
T cd03794 237 TLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELAK----AL-------GLDNVTF-LGRVPKEELPELLAA 294 (394)
T ss_pred HHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHHH----Hc-------CCCcEEE-eCCCChHHHHHHHHh
Confidence 999999998776 554 4555552 222223333211 11 1224555 479999999999999
Q ss_pred ccEEEEccCCCCC-----CcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHH
Q psy775 438 AAVALVTPLRDGM-----NLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 438 ADV~VvpSlrEGf-----nLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~e 509 (1460)
||++++||..|++ +...+|||+| |.|+|+|..+|..+.+.. |+++++.|+++++++|.++++++...
T Consensus 295 ~di~i~~~~~~~~~~~~~p~~~~Ea~~~-----G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~ 369 (394)
T cd03794 295 ADVGLVPLKPGPAFEGVSPSKLFEYMAA-----GKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEER 369 (394)
T ss_pred hCeeEEeccCcccccccCchHHHHHHHC-----CCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHH
Confidence 9999999999976 4457999999 778899999998888754 89999999999999999999766555
Q ss_pred HHHHHHHHHHHHhhcC
Q psy775 510 RTLRMNYLRKREKHMN 525 (1460)
Q Consensus 510 r~~R~~~l~~~v~~~~ 525 (1460)
++.+.++......+++
T Consensus 370 ~~~~~~~~~~~~~~~s 385 (394)
T cd03794 370 AEMGENGRRYVEEKFS 385 (394)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 5544444333333555
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=185.16 Aligned_cols=179 Identities=20% Similarity=0.230 Sum_probs=133.9
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC-CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH-LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~-~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
++++|+++||+.+.||+...++||.++.+++|+. +.++.|+.+|.+.... ..++.+++++++++.+.. .
T Consensus 236 ~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~-------~ 305 (419)
T cd03806 236 RENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE-------D 305 (419)
T ss_pred CCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC-------C
Confidence 4578999999999999999999999999988862 1247788777643221 123556677777665432 3
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|.++.+++..+|+.||+++.||..||||++++||||| +.|+|+|..+|..+ -+|+|+.
T Consensus 306 ~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-----G~pvIa~~~ggp~~-----~iv~~~~------- 368 (419)
T cd03806 306 KVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-----GLIPLAHASGGPLL-----DIVVPWD------- 368 (419)
T ss_pred eEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-----CCcEEEEcCCCCch-----heeeccC-------
Confidence 477889999999999999999999999999999999999999 77899999877543 0111110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
++ ..+++++ |++++|++|.+++++++++++...++.++...
T Consensus 369 -----------------------------~g--------~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~ 409 (419)
T cd03806 369 -----------------------------GG--------PTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVK 409 (419)
T ss_pred -----------------------------CC--------CceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 11 2456764 99999999999999988777665555555555
Q ss_pred hcCHHH
Q psy775 979 VHDVNY 984 (1460)
Q Consensus 979 ~~~~~~ 984 (1460)
+++.+.
T Consensus 410 ~fs~~~ 415 (419)
T cd03806 410 RFSDEE 415 (419)
T ss_pred hhCHHH
Confidence 565543
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=181.59 Aligned_cols=280 Identities=15% Similarity=0.169 Sum_probs=187.4
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhh-cccCceeecccHhHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQG-MLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~-LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
|+|-+|+++..+.+..+. . ......+..+..|-.++..+... .....+.+- +-.+|.|-+.+....+++...
T Consensus 90 DiIh~~~~~~~~~~~~~~-~--~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 162 (398)
T cd03796 90 TIVHGHQAFSALAHEALL-H--ARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR-- 162 (398)
T ss_pred CEEEECCCCchHHHHHHH-H--hhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH--
Confidence 799999876543222111 0 12234567777886554222111 011112222 235666666655544433211
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.+....++.++|+|+|.+.|.+....
T Consensus 163 ---------------~~~~~~k~~vi~ngvd~~~f~~~~~~--------------------------------------- 188 (398)
T cd03796 163 ---------------ASLDPERVSVIPNAVDSSDFTPDPSK--------------------------------------- 188 (398)
T ss_pred ---------------hCCChhhEEEEcCccCHHHcCCCccc---------------------------------------
Confidence 11234567889999998777431000
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
...++++|+++||+.+.||+..+++|+..+.+++|++ .|+.+|.+ +.. +++++++++
T Consensus 189 ----------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g-----~~~----~~l~~~~~~ 245 (398)
T cd03796 189 ----------RDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNV----RFIIGGDG-----PKR----ILLEEMREK 245 (398)
T ss_pred ----------CCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCE----EEEEEeCC-----chH----HHHHHHHHH
Confidence 0145789999999999999999999999988888875 56666643 222 334445544
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 886 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~ 886 (1460)
.+. ...+.+.|.++.+++.++|+.||++++||..||||++.+||||| +.|+|+|..+|..+.+
T Consensus 246 ~~l-------~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~-----G~PVI~s~~gg~~e~i----- 308 (398)
T cd03796 246 YNL-------QDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASC-----GLLVVSTRVGGIPEVL----- 308 (398)
T ss_pred hCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHc-----CCCEEECCCCCchhhe-----
Confidence 322 23366789999999999999999999999999999999999999 7899999999877611
Q ss_pred cCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH
Q psy775 887 CNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER 966 (1460)
Q Consensus 887 vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er 966 (1460)
.+ .+.++++| |.++++++|.++++++.+.+
T Consensus 309 ----------------------------------------~~---------~~~~~~~~-~~~~l~~~l~~~l~~~~~~~ 338 (398)
T cd03796 309 ----------------------------------------PP---------DMILLAEP-DVESIVRKLEEAISILRTGK 338 (398)
T ss_pred ----------------------------------------eC---------CceeecCC-CHHHHHHHHHHHHhChhhhh
Confidence 11 12345655 99999999999999766554
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 967 TLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
....+...+....+++..-++++++-+++...
T Consensus 339 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 339 HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 44455545566778999999998888877664
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.7e-15 Score=170.80 Aligned_cols=238 Identities=19% Similarity=0.199 Sum_probs=164.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|.+..+..+.+...+ ..+.++.+.+|=.++. .+....+... .|.+-..+....+.|.+.
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~----~~~~~~i~~~hd~~~~------~~~~~~~~~~---~d~ii~~s~~~~~~~~~~- 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAAR----DRGIPIVLTLHDYWLI------CPRQGLFKKG---GDAVIAPSRFLLDRYVAN- 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHH----hcCCCEEEEEeeeeee------cchhhhhccC---CCEEEEeCHHHHHHHHHc-
Confidence 4699999987554443322111 1247888999854432 2222222221 277777776555555431
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
.....++.++|+|+|...+..... ....++.+++++||+.+.||+..+++|+..+.+
T Consensus 162 -----------------~~~~~~~~vi~n~~~~~~~~~~~~----~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-- 218 (359)
T cd03823 162 -----------------GLFAEKISVIRNGIDLDRAKRPRR----APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-- 218 (359)
T ss_pred -----------------CCCccceEEecCCcChhhcccccc----CCCCCceEEEEEecCccccCHHHHHHHHHHHHh--
Confidence 111347889999999987754321 111456789999999999999999999998866
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDG 449 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rEG 449 (1460)
++ +.|+.+|...... ...... + ..+.+.+.|.++.+++..+|+.||++++||. .||
T Consensus 219 ~~----~~l~i~G~~~~~~-----~~~~~~-------~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~ 275 (359)
T cd03823 219 GD----IELVIVGNGLELE-----EESYEL-------E-------GDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPEN 275 (359)
T ss_pred cC----cEEEEEcCchhhh-----HHHHhh-------c-------CCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCC
Confidence 44 4566666332111 111111 1 1123556799999999999999999999998 799
Q ss_pred CCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 450 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 450 fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
+|++++|||+| |.|+|+|+.+|..+.+.. |++++|.|+++++++|.++++.+...+..+
T Consensus 276 ~~~~~~Ea~a~-----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~ 337 (359)
T cd03823 276 FPLVIREALAA-----GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLR 337 (359)
T ss_pred CChHHHHHHHC-----CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHH
Confidence 99999999999 677899999888877753 899999999999999999999655444433
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=174.30 Aligned_cols=262 Identities=16% Similarity=0.157 Sum_probs=169.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|....+.....+... .+.+..+.+|...-....+... .....-..+..||.|-..+..+.+.+..
T Consensus 83 ~~Dii~~~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~-- 154 (357)
T cd03795 83 KADVIHLHFPNPLADLALLLLP-----RKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV-- 154 (357)
T ss_pred CCCEEEEecCcchHHHHHHHhc-----cCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH--
Confidence 4789999986544332222211 2467778888533211110000 0111112334467776666655543332
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh--ccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI--DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~--~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
......++.++|+|+|.+.+........... ..+.++|+++||+.+.||+..+++|+.++.
T Consensus 155 ----------------~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 155 ----------------LRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ----------------hcCCccceEEecCCCChhhcCCcchhhhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 0111246788999999987764322111111 156788999999999999999999998873
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC--
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-- 446 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-- 446 (1460)
++.++.+|.+ +....++ +++.+.+ ..+-+.+.|.++++++..+|+.||++++||.
T Consensus 218 -------~~~l~i~G~g-----~~~~~~~----~~~~~~~-------~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~ 274 (357)
T cd03795 218 -------DAPLVIVGEG-----PLEAELE----ALAAALG-------LLDRVRFLGRLDDEEKAALLAACDVFVFPSVER 274 (357)
T ss_pred -------CcEEEEEeCC-----hhHHHHH----HHHHhcC-------CcceEEEcCCCCHHHHHHHHHhCCEEEeCCccc
Confidence 3556666632 2222333 3332222 1233566799999999999999999999996
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc--c--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--E--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
.||||++++|||+| |.|+|+|+.+|..+.+. + |++++|.|+++++++|.++++++...++++.++.....+
T Consensus 275 ~e~~g~~~~Ea~~~-----g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 275 SEAFGIVLLEAMAF-----GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEE 349 (357)
T ss_pred ccccchHHHHHHHc-----CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 59999999999999 67779999888877663 2 899999999999999999999776666555544433334
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
.++
T Consensus 350 ~~s 352 (357)
T cd03795 350 EFT 352 (357)
T ss_pred hcc
Confidence 333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=182.96 Aligned_cols=149 Identities=17% Similarity=0.089 Sum_probs=109.1
Q ss_pred EEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecC-c-cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDR-L-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT 388 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgR-L-d~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~ 388 (1460)
.++.++|+|||++.+...... .... ..++++|++|+| + ++.||+..+++|+.++ .+ ++.|+.+|.....
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~ivG~g~~~ 283 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-PPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTFGKFSPF 283 (405)
T ss_pred CCEEEeCCCcCcccccccccc-cccccCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEEcCCCcc
Confidence 478889999997543221111 0111 146778999999 4 4789999999999875 23 3567767643210
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC-CCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC
Q psy775 389 DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 467 (1460)
Q Consensus 389 ~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~-v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G 467 (1460)
. . ..+.++ |. .+.+++..+|++||+||+||.+||||+|++||||| |.
T Consensus 284 ~------------------~--------~~v~~~-g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~-----G~ 331 (405)
T PRK10125 284 T------------------A--------GNVVNH-GFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI-----GV 331 (405)
T ss_pred c------------------c--------cceEEe-cCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-----CC
Confidence 0 0 013333 44 36789999999999999999999999999999999 67
Q ss_pred eEEEcCCCCchhccc--ccEEECCCCHHHHHHHHH
Q psy775 468 VLIVSPFAGAGEQMH--EALICNPYEIDAAAEVIH 500 (1460)
Q Consensus 468 vlVlSe~aGaa~~L~--~allVNP~D~~elA~AI~ 500 (1460)
|||+|..+|..+.+. .|++|+|.|++++|+++.
T Consensus 332 PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~ 366 (405)
T PRK10125 332 PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSK 366 (405)
T ss_pred CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccC
Confidence 789999999877774 399999999999998653
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-15 Score=168.83 Aligned_cols=265 Identities=18% Similarity=0.145 Sum_probs=175.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHH-HhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEI-LQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~ei-l~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|++|..+..++..+..+... ..++.+.+|...+......... ....+ -..+-.+|.+-+.+....+.+.+
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 155 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAG----VPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALK 155 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcC----CCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHH
Confidence 479999998877777666654322 4567777775432211100000 00011 11223468888888777766655
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
. +. .....++.+.|+|+|.+.+...... ...++..++++||+.+.||+..+++|+..+.+
T Consensus 156 ~-----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 215 (359)
T cd03808 156 L-----GI-----------IKKKKTVLIPGSGVDLDRFSPSPEP----IPEDDPVFLFVARLLKDKGIDELLEAARILKA 215 (359)
T ss_pred h-----cC-----------CCcCceEEecCCCCChhhcCccccc----cCCCCcEEEEEeccccccCHHHHHHHHHHHHh
Confidence 1 00 0012456678999998877543211 12456789999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++|++ .|+.+|....... .... ++.+.+. .+.+.+.|. .+++..+|+.||++++||..|
T Consensus 216 ~~~~~----~l~i~G~~~~~~~-----~~~~---~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e 274 (359)
T cd03808 216 KGPNV----RLLLVGDGDEENP-----AAIL---EIEKLGL-------EGRVEFLGF--RDDVPELLAAADVFVLPSYRE 274 (359)
T ss_pred cCCCe----EEEEEcCCCcchh-----hHHH---HHHhcCC-------cceEEEeec--cccHHHHHHhccEEEecCccc
Confidence 77764 4666664432211 1111 1112111 123444566 678999999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|||++++|||+| |.|+|+|..+|..+.+. .|++++|.|+++++++|.+++..++..+++..++......+++
T Consensus 275 ~~~~~~~Ea~~~-----G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 275 GLPRVLLEAMAM-----GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFD 349 (359)
T ss_pred CcchHHHHHHHc-----CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999 67789999998888874 2899999999999999999988776655555555444455555
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.8e-16 Score=180.68 Aligned_cols=185 Identities=19% Similarity=0.248 Sum_probs=133.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..++++|||+++.||+..+++||+++.+++|++..++.++.+|. . ++. +.+. . ..
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------~-------~~~----~l~l----~--~~ 202 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------K-------QFT----QLEV----P--AN 202 (335)
T ss_pred CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------H-------HHH----HcCC----C--Cc
Confidence 4567899999999999999999999999999999877777775541 1 111 1111 1 12
Q ss_pred EEEEc--CCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhh--hhhcCcccchh
Q psy775 819 IRYIY--GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDA 894 (1460)
Q Consensus 819 vv~~~--g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~--~l~vnP~~~~~ 894 (1460)
|.+.. |.++.+++.++|+.||++|+||..||||++++||||| +.|+|+|..+|..++.++ ..+|.+.+.++
T Consensus 203 V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~-----G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 203 VHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM-----GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred EEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----CCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 33332 6778999999999999999999999999999999999 789999999998884331 12222222221
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
.+++ ..| .+..++++|++++|++|.+++.++..+ .|...++
T Consensus 278 ~~~~-------------------------------~~g------~g~~~~~~d~~~la~ai~~~~~~~~~~--~~~~~~~ 318 (335)
T PHA01633 278 YYDK-------------------------------EHG------QKWKIHKFQIEDMANAIILAFELQDRE--ERSMKLK 318 (335)
T ss_pred hcCc-------------------------------ccC------ceeeecCCCHHHHHHHHHHHHhccChh--hhhHHHH
Confidence 1110 011 246899999999999999998876432 2344457
Q ss_pred hHHHhcCHHHHHHHHH
Q psy775 975 KREKVHDVNYWMRSFL 990 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l 990 (1460)
+..++++++.-.++++
T Consensus 319 ~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 319 ELAKKYDIRNLYTRFL 334 (335)
T ss_pred HHHHhcCHHHHHHHhh
Confidence 8888888887777654
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.4e-16 Score=194.65 Aligned_cols=186 Identities=19% Similarity=0.206 Sum_probs=133.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCC---ChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT---DVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~---~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++|++|+|+++.||+..+++||.+.-+.. ..+.|+.+|.+... ...+..+..+++.+++.+.+-.
T Consensus 548 ~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~----- 618 (784)
T TIGR02470 548 PNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH----- 618 (784)
T ss_pred CCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC-----
Confidence 57889999999999999999999998764333 24678888865321 1122223445666677665422
Q ss_pred CccEEEEcCCC-CHHHHHHHHH----HccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 816 WSPIRYIYGCI-SQDELASFYR----DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 816 ~~pvv~~~g~v-~~eel~Aly~----~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
..+.+.|.. +..++..+|+ .+||||.||.+|||||+++||||| |.|+|+|..+|..+.
T Consensus 619 --g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc-----GlPVVAT~~GG~~Ei---------- 681 (784)
T TIGR02470 619 --GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC-----GLPTFATRFGGPLEI---------- 681 (784)
T ss_pred --CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc-----CCCEEEcCCCCHHHH----------
Confidence 225566653 5555556665 247999999999999999999999 789999999998871
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh----CCCHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL----TMPEDER 966 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL----~m~~~er 966 (1460)
|.++ ..+++|+|.|++++|++|.+++ +.+...+
T Consensus 682 -----------------------------------V~dg--------~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~ 718 (784)
T TIGR02470 682 -----------------------------------IQDG--------VSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQ 718 (784)
T ss_pred -----------------------------------hcCC--------CcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 1222 3469999999999999999886 3444445
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 967 TLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
+...+++.+..+.+++...+++.+.-.
T Consensus 719 ~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 719 KISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555555555557789888888876554
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.1e-17 Score=193.91 Aligned_cols=115 Identities=32% Similarity=0.477 Sum_probs=100.7
Q ss_pred hhhhhcCchhhhhhcccCCCcCCCCCCCCC-CCC--CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCC
Q psy775 1342 DFDEYLSKNELLILKGMGTLITEDGDDVLP-TTM--QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVL 1418 (1460)
Q Consensus 1342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~ 1418 (1460)
|--.--|+.++|..|++++..++.+.+..+ .|+ +|++++.|+++.+. +++++++|||||||||+||+++|++|.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~~--~~~k~~~LfLDyDGTLaPIv~~Pd~A~~ 142 (384)
T PLN02580 65 DAMKSSSPPRKKLNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIANF--AKGKKIALFLDYDGTLSPIVDDPDRALM 142 (384)
T ss_pred hhhhccCCCccccccccccccccccchHHHHHHHHhCcHHHHHHHHHHHH--hhcCCeEEEEecCCccCCCCCCcccccC
Confidence 444445777888888888777777766555 787 99999999998765 5678999999999999999999999999
Q ss_pred ChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1419 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1419 ~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
+++++++|++||+++ +|||||||++++|++++++++++||
T Consensus 143 s~~~~~aL~~La~~~--~VAIVSGR~~~~L~~~l~~~~l~la 182 (384)
T PLN02580 143 SDAMRSAVKNVAKYF--PTAIISGRSRDKVYELVGLTELYYA 182 (384)
T ss_pred CHHHHHHHHHHhhCC--CEEEEeCCCHHHHHHHhCCCCccEE
Confidence 999999999999996 7999999999999999999999886
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=193.62 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=133.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCC-CCC--hhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS-RTD--VKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~ps-r~~--~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++|++|||+++.||+..+++||.++.+..|+ +.|+.+|.+. ... ..+..+..+++.+++++.+-.
T Consensus 571 ~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~----- 641 (815)
T PLN00142 571 RKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----- 641 (815)
T ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC-----
Confidence 4577999999999999999999999987665554 5688787652 111 111222234566666655432
Q ss_pred CccEEEEcC----CCCHHHHHHHHH-HccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 816 WSPIRYIYG----CISQDELASFYR-DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 816 ~~pvv~~~g----~v~~eel~Aly~-~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
..+.+.| ..+.++++.+|+ ++|+||.||.+||||++++||||| +.|+|+|..+|..+.
T Consensus 642 --~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~-----GlPVVATdvGG~~EI---------- 704 (815)
T PLN00142 642 --GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCQGGPAEI---------- 704 (815)
T ss_pred --CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHc-----CCCEEEcCCCCHHHH----------
Confidence 1133433 456678888877 479999999999999999999999 789999999997771
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh----CCCHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL----TMPEDER 966 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL----~m~~~er 966 (1460)
|.++ ..+++|+|.|++++|++|..++ +.+...+
T Consensus 705 -----------------------------------V~dG--------~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~ 741 (815)
T PLN00142 705 -----------------------------------IVDG--------VSGFHIDPYHGDEAANKIADFFEKCKEDPSYWN 741 (815)
T ss_pred -----------------------------------hcCC--------CcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 1222 3469999999999999998765 4444445
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 967 TLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
+...++..+..+.+++...++++++-.
T Consensus 742 ~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 742 KISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555555455557789888888877654
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.9e-15 Score=175.55 Aligned_cols=179 Identities=18% Similarity=0.236 Sum_probs=136.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhC---CCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH-HhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH---PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR-INGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~---P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~-IN~~~~~~ 814 (1460)
.++.+++++||+.+.||+...++|++++.+++ |+ +.|+.+|.+... ..+..++.+++++++++ .+.
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l----- 278 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLL----- 278 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCC-----
Confidence 56788999999999999999999999998877 55 567777765322 22233455666666655 322
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchh
Q psy775 815 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
..-+.|.|.++.+++..+|+.||++++||..||||++++||||| +.|+|+|..+|..+.+
T Consensus 279 --~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~-----G~PvI~s~~~~~~e~i------------- 338 (392)
T cd03805 279 --EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA-----GKPVIACNSGGPLETV------------- 338 (392)
T ss_pred --CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc-----CCCEEEECCCCcHHHh-------------
Confidence 23477889999999999999999999999999999999999999 7899999988866611
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
.++ ..+++++| |++++|++|.++++.+...++.+.+...
T Consensus 339 --------------------------------~~~--------~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 339 --------------------------------VDG--------ETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred --------------------------------ccC--------CceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 111 24577877 9999999999999987655555555433
Q ss_pred hHHHhcCHHHHHHH
Q psy775 975 KREKVHDVNYWMRS 988 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~ 988 (1460)
....++++..++++
T Consensus 378 ~~~~~~s~~~~~~~ 391 (392)
T cd03805 378 RVKEKFSTEAFAER 391 (392)
T ss_pred HHHHhcCHHHHhhh
Confidence 34466777777654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.6e-15 Score=170.16 Aligned_cols=173 Identities=23% Similarity=0.304 Sum_probs=133.5
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|+.++.+++|++ .|+.+|.+. . .+++++.+.+.|. .+
T Consensus 186 ~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~G~g~-----~----~~~~~~~~~~~~~-------~~ 245 (360)
T cd04951 186 NDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDI----KLLIAGDGP-----L----RATLERLIKALGL-------SN 245 (360)
T ss_pred CCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCe----EEEEEcCCC-----c----HHHHHHHHHhcCC-------CC
Confidence 56789999999999999999999999999888864 566666332 1 2334444444332 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|.. +++..+|+.||++++||..||||++++|||+| +.|+|+|..+|..+.+.
T Consensus 246 ~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~---------------- 302 (360)
T cd04951 246 RVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMAC-----ELPVVATDAGGVREVVG---------------- 302 (360)
T ss_pred cEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHc-----CCCEEEecCCChhhEec----------------
Confidence 35566654 57889999999999999999999999999999 78999999887666110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+.+..++|.|+++++++|.+++++++..+....+.......
T Consensus 303 ---------------------------------------~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~ 343 (360)
T cd04951 303 ---------------------------------------DSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVK 343 (360)
T ss_pred ---------------------------------------CCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 13478899999999999999998777776665555445567
Q ss_pred hcCHHHHHHHHHHHH
Q psy775 979 VHDVNYWMRSFLKGM 993 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~l 993 (1460)
.++++.+++++.+-+
T Consensus 344 ~~s~~~~~~~~~~~y 358 (360)
T cd04951 344 KFSINSIVQQWLTLY 358 (360)
T ss_pred hcCHHHHHHHHHHHh
Confidence 789999988887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-15 Score=168.31 Aligned_cols=252 Identities=17% Similarity=0.103 Sum_probs=168.8
Q ss_pred CCCEEEEeCc-chhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDY-HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDY-hL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
.-|+|++|++ ...++..+.++ . +.++.+.+|-.++..... ..+........+..+|.+-+.+......+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-----~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-----L-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-----c-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHh
Confidence 4699999998 44444433332 1 578899999877543211 11111123444556788887777665555442
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
. .....++.++|+|+|.+.+........... ..++.+++++||+.+.||+..+++|+..+.+
T Consensus 154 ~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~ 216 (353)
T cd03811 154 L-----------------GIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK 216 (353)
T ss_pred h-----------------cCCccccEEecCCcChhhcCcccchhhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh
Confidence 1 112356788999999887765432211001 1567889999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++++. .|+.+|.+ +...+++ +.+.+.+. .+.+.+.|.. +++..+|+.||++++||..|
T Consensus 217 ~~~~~----~l~i~G~~-----~~~~~~~----~~~~~~~~-------~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e 274 (353)
T cd03811 217 EGPDA----RLVILGDG-----PLREELE----ALAKELGL-------ADRVHFLGFQ--SNPYPYLKAADLFVLSSRYE 274 (353)
T ss_pred cCCCc----eEEEEcCC-----ccHHHHH----HHHHhcCC-------CccEEEeccc--CCHHHHHHhCCEEEeCcccC
Confidence 76664 46555532 2222333 33333332 2334555764 46789999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHH---HHHHHHHcCCCHHHHHHH
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAA---AEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~el---A~AI~~aL~m~~~er~~R 513 (1460)
|||++++|||+| |.|+|+|+.+|..+.+.+ |++++|.|.+++ +++|...+..+...++.+
T Consensus 275 ~~~~~~~Ea~~~-----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 340 (353)
T cd03811 275 GFPNVLLEAMAL-----GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLA 340 (353)
T ss_pred CCCcHHHHHHHh-----CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHH
Confidence 999999999999 677899999988887743 899999999999 666667666555444433
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-15 Score=182.51 Aligned_cols=175 Identities=18% Similarity=0.263 Sum_probs=132.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
+++++|+++||+.+.||+...++|+++ .|+ +.|+.+|.+ + +++++++++.. . +
T Consensus 261 ~~~~~i~~vGrl~~~K~~~~li~a~~~----~~~----~~l~ivG~G-----~----~~~~l~~~~~~-------~---~ 313 (465)
T PLN02871 261 PEKPLIVYVGRLGAEKNLDFLKRVMER----LPG----ARLAFVGDG-----P----YREELEKMFAG-------T---P 313 (465)
T ss_pred CCCeEEEEeCCCchhhhHHHHHHHHHh----CCC----cEEEEEeCC-----h----HHHHHHHHhcc-------C---C
Confidence 467889999999999999999988765 354 467777732 2 23445544431 1 1
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
+.|.|.++.+|+..+|+.||++|+||..|||+++++||||| +.|+|+|..+|..+.+ ++.
T Consensus 314 -V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-----G~PVI~s~~gg~~eiv------~~~-------- 373 (465)
T PLN02871 314 -TVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMAS-----GVPVVAARAGGIPDII------PPD-------- 373 (465)
T ss_pred -eEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHc-----CCCEEEcCCCCcHhhh------hcC--------
Confidence 56789999999999999999999999999999999999999 7899999998876611 110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
- .-.++++++|.|++++|++|.++++.+...++++ +..++++.
T Consensus 374 -------------------------------~-----~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~-~~a~~~~~ 416 (465)
T PLN02871 374 -------------------------------Q-----EGKTGFLYTPGDVDDCVEKLETLLADPELRERMG-AAAREEVE 416 (465)
T ss_pred -------------------------------C-----CCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH-HHHHHHHH
Confidence 0 0145799999999999999999998654444444 44467788
Q ss_pred hcCHHHHHHHHHHH-Hhhhh
Q psy775 979 VHDVNYWMRSFLKG-MGTLI 997 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~-l~~~~ 997 (1460)
++++...++++++. ...++
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 89999999999885 44433
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.6e-15 Score=172.18 Aligned_cols=172 Identities=20% Similarity=0.238 Sum_probs=132.5
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
+++.++++||+.+.||+...++|+..+.+++|++ .|+.+|.+ + +.+++++++++.+ +.+.
T Consensus 187 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~ivG~g-----~----~~~~~~~~~~~~~-------~~~~ 246 (367)
T cd05844 187 RPPRILFVGRFVEKKGPLLLLEAFARLARRVPEV----RLVIIGDG-----P----LLAALEALARALG-------LGGR 246 (367)
T ss_pred CCcEEEEEEeeccccChHHHHHHHHHHHHhCCCe----EEEEEeCc-----h----HHHHHHHHHHHcC-------CCCe
Confidence 3567899999999999999999999998888874 57766632 1 2345555555432 2234
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCC------ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPL------RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSl------rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
+.+.|.++.+++..+|+.||++++||. .|||+++++|||+| +.|+|+|+.+|..+.+
T Consensus 247 v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-----G~PvI~s~~~~~~e~i------------ 309 (367)
T cd05844 247 VTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-----GVPVVATRHGGIPEAV------------ 309 (367)
T ss_pred EEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-----CCCEEEeCCCCchhhe------------
Confidence 678899999999999999999999997 59999999999999 7899999998876611
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
. ....+++++|.|+++++++|.++++.+....+.+.+.
T Consensus 310 ---------------------------------~--------~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a- 347 (367)
T cd05844 310 ---------------------------------E--------DGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAG- 347 (367)
T ss_pred ---------------------------------e--------cCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 1 1135689999999999999999998655444444443
Q ss_pred HhHH-HhcCHHHHHHHHH
Q psy775 974 RKRE-KVHDVNYWMRSFL 990 (1460)
Q Consensus 974 ~~~v-~~~~~~~W~~~~l 990 (1460)
++++ ..++++.+++++.
T Consensus 348 ~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 348 RRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHCCHHHHHHHHh
Confidence 5555 5788888877664
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-15 Score=175.49 Aligned_cols=174 Identities=13% Similarity=0.071 Sum_probs=124.9
Q ss_pred EEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChH
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ 391 (1460)
.++.++|+|||++.|.+.... ..+..++.++||+.+.||++.+|+|++++.+++|++ .++.+|.. .
T Consensus 118 ~~i~vIpNGVd~~~f~~~~~~-----~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~~-----~ 183 (331)
T PHA01630 118 QPIYVIPHNLNPRMFEYKPKE-----KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSSN-----M 183 (331)
T ss_pred CCEEEECCCCCHHHcCCCccc-----cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeCc-----c
Confidence 367789999999888543211 123456667889999999999999999998887764 46666621 1
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
. +. ++. + + .+ +.+.++++++..+|+.||++++||..||||++++||||| |.|+|+
T Consensus 184 ~--~~--~l~------~--~--~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~-----G~PVIa 238 (331)
T PHA01630 184 L--DP--RLF------G--L--NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL-----GLDVVV 238 (331)
T ss_pred c--ch--hhc------c--c--cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc-----CCCEEE
Confidence 0 11 110 1 0 01 135689999999999999999999999999999999999 677899
Q ss_pred cCCCCchhcccc---cEE--------------------ECCCCHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHhhcC
Q psy775 472 SPFAGAGEQMHE---ALI--------------------CNPYEIDAAAEVIHRALTMP--EDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 472 Se~aGaa~~L~~---all--------------------VNP~D~~elA~AI~~aL~m~--~~er~~R~~~l~~~v~~~~ 525 (1460)
|..+|..+.+.+ |++ ++| |.+++++++.++|.++ ++.+....++.+...++++
T Consensus 239 s~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs 316 (331)
T PHA01630 239 TEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYS 316 (331)
T ss_pred eCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCC
Confidence 998887776643 444 455 7888999999999875 4444444444444555655
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.5e-15 Score=184.91 Aligned_cols=181 Identities=19% Similarity=0.206 Sum_probs=133.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+++||+.+.||+...++|++.+.++.|++ .|+.+|.+. .+ ..+.+++++++++.|.. .
T Consensus 291 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~----~~~~~e~~~li~~l~l~-------~ 354 (475)
T cd03813 291 KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED----PEYAEECRELVESLGLE-------D 354 (475)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC----hHHHHHHHHHHHHhCCC-------C
Confidence 45678999999999999999999999998888874 566666432 11 24566777777776543 2
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.| .+++..+|+.||++++||..|||+++++||||| +.|+|+|..+|+.+.+. ..+-
T Consensus 355 ~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-----G~PVVatd~g~~~elv~------~~~~------ 414 (475)
T cd03813 355 NVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-----GIPVVATDVGSCRELIE------GADD------ 414 (475)
T ss_pred eEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-----CCCEEECCCCChHHHhc------CCcc------
Confidence 366776 668899999999999999999999999999999 78999999988776221 0000
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+..| ..+++++|.|++++|++|.++++.+...++...++ ++++.
T Consensus 415 ------------------------------~~~g-----~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a-~~~v~ 458 (475)
T cd03813 415 ------------------------------EALG-----PAGEVVPPADPEALARAILRLLKDPELRRAMGEAG-RKRVE 458 (475)
T ss_pred ------------------------------cccC-----CceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHH
Confidence 0001 35689999999999999999998765545544444 44454
Q ss_pred h-cCHHHHHHHHHH
Q psy775 979 V-HDVNYWMRSFLK 991 (1460)
Q Consensus 979 ~-~~~~~W~~~~l~ 991 (1460)
+ ++....++++.+
T Consensus 459 ~~~s~~~~~~~y~~ 472 (475)
T cd03813 459 RYYTLERMIDSYRR 472 (475)
T ss_pred HhCCHHHHHHHHHH
Confidence 4 566666666554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=180.98 Aligned_cols=236 Identities=16% Similarity=0.194 Sum_probs=166.3
Q ss_pred cCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccccc
Q psy775 626 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRL 705 (1460)
Q Consensus 626 ~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~ 705 (1460)
.+|.|-..+....+.+.+ .+....++.++|+|||.+.|.+.... .
T Consensus 171 ~ad~ii~~S~~~~~~~~~------------------~~~~~~~i~vi~ngvd~~~~~~~~~~---~-------------- 215 (412)
T PRK10307 171 RFDNVSTISRSMMNKARE------------------KGVAAEKVIFFPNWSEVARFQPVADA---D-------------- 215 (412)
T ss_pred hCCEEEecCHHHHHHHHH------------------cCCCcccEEEECCCcCHhhcCCCCcc---c--------------
Confidence 467777777666555432 12234568889999999887542110 0
Q ss_pred ccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcC
Q psy775 706 DYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 785 (1460)
Q Consensus 706 ~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~p 785 (1460)
.+.+|+.++++ .++++|+++||+.+.||+..+++|++++ +++|+ +.|+.+|.+
T Consensus 216 ------~~~~~~~~~~~----------------~~~~~i~~~G~l~~~kg~~~li~a~~~l-~~~~~----~~l~ivG~g 268 (412)
T PRK10307 216 ------VDALRAQLGLP----------------DGKKIVLYSGNIGEKQGLELVIDAARRL-RDRPD----LIFVICGQG 268 (412)
T ss_pred ------hHHHHHHcCCC----------------CCCEEEEEcCccccccCHHHHHHHHHHh-ccCCC----eEEEEECCC
Confidence 12344444432 4678999999999999999999999875 55665 567766643
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc----ceeeeeec
Q psy775 786 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV----AKEFVACQ 861 (1460)
Q Consensus 786 sr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv----a~EymAc~ 861 (1460)
+ .++++++++++.+. .. +.|.|.++.+++..+|+.||++++||..|+++++ ..|||||
T Consensus 269 -----~----~~~~l~~~~~~~~l-------~~-v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~- 330 (412)
T PRK10307 269 -----G----GKARLEKMAQCRGL-------PN-VHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLAS- 330 (412)
T ss_pred -----h----hHHHHHHHHHHcCC-------Cc-eEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHc-
Confidence 2 23445555554332 12 5667899999999999999999999999996655 5899999
Q ss_pred cCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceE
Q psy775 862 INEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 941 (1460)
Q Consensus 862 ~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~al 941 (1460)
+.|+|+|..+|..- .+ + . . ..++
T Consensus 331 ----G~PVi~s~~~g~~~----------------~~---------------~-----------------i----~-~~G~ 353 (412)
T PRK10307 331 ----GRNVVATAEPGTEL----------------GQ---------------L-----------------V----E-GIGV 353 (412)
T ss_pred ----CCCEEEEeCCCchH----------------HH---------------H-----------------H----h-CCcE
Confidence 78999999877421 00 0 0 0 2468
Q ss_pred EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH-HhcCHHHHHHHHHHHHhhhhhc
Q psy775 942 ICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE-KVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 942 lVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+++|.|++++|++|.++++++....+++.++ ++++ ..+++...++++++.+++...+
T Consensus 354 ~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a-~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 354 CVEPESVEALVAAIAALARQALLRPKLGTVA-REYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998765555555555 5555 5689999999999988876643
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=4e-14 Score=165.83 Aligned_cols=282 Identities=15% Similarity=0.122 Sum_probs=181.6
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCCccccccCcc-HHHHHhhcccCceeecccHhHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPPWDIFRLFPW-SDEILQGMLGCDMVGFHIEDYCLNFVDCC 645 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~~e~fr~lP~-r~eIL~~LL~aDlIGFqt~~yar~FL~~c 645 (1460)
|+|.+|.+.-...+..+...+.. ....+..+.+|-. +.. ....+. ..-+...+-.+|.|-..+......+.+.+
T Consensus 86 divh~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 161 (371)
T cd04962 86 DLLHVHYAVPHAVAAYLAREILG-KKDLPVVTTLHGTDITL---VGQDPSFQPATRFSIEKSDGVTAVSESLRQETYELF 161 (371)
T ss_pred cEEeecccCCccHHHHHHHHhcC-cCCCcEEEEEcCCcccc---ccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHhc
Confidence 68888876544444444422211 1245666667742 110 001111 11223345678988888887766654321
Q ss_pred HHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhH
Q psy775 646 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYER 725 (1460)
Q Consensus 646 ~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r 725 (1460)
+..-++.++|+|+|...|..... ...++.+++
T Consensus 162 ------------------~~~~~i~vi~n~~~~~~~~~~~~--------------------------~~~~~~~~~---- 193 (371)
T cd04962 162 ------------------DITKEIEVIPNFVDEDRFRPKPD--------------------------EALKRRLGA---- 193 (371)
T ss_pred ------------------CCcCCEEEecCCcCHhhcCCCch--------------------------HHHHHhcCC----
Confidence 11234778999999866542110 112222222
Q ss_pred HHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 726 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 726 ~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
..++++++++||+.+.||+...++|+.++.++ ++ +.|+.+|.+. +. .++++++.
T Consensus 194 ------------~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~----~~l~i~G~g~-----~~----~~~~~~~~ 247 (371)
T cd04962 194 ------------PEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VP----ARLLLVGDGP-----ER----SPAERLAR 247 (371)
T ss_pred ------------CCCCeEEEEecccccccCHHHHHHHHHHHHhc-CC----ceEEEEcCCc-----CH----HHHHHHHH
Confidence 25678999999999999999999999987654 33 3566666432 22 23344444
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhh
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 885 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l 885 (1460)
+.+. .+.+.+.|.. +++..+|+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+
T Consensus 248 ~~~~-------~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-----g~PvI~s~~~~~~e~i---- 309 (371)
T cd04962 248 ELGL-------QDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-----GVPVVASNAGGIPEVV---- 309 (371)
T ss_pred HcCC-------CceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-----CCCEEEeCCCCchhhh----
Confidence 3322 2335566654 57999999999999999999999999999999 7899999998876611
Q ss_pred hcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHH
Q psy775 886 ICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 965 (1460)
Q Consensus 886 ~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~e 965 (1460)
.++ ..+++++|.|++++|++|.+.++++...
T Consensus 310 -----------------------------------------~~~--------~~G~~~~~~~~~~l~~~i~~l~~~~~~~ 340 (371)
T cd04962 310 -----------------------------------------KHG--------ETGFLVDVGDVEAMAEYALSLLEDDELW 340 (371)
T ss_pred -----------------------------------------cCC--------CceEEcCCCCHHHHHHHHHHHHhCHHHH
Confidence 111 2458899999999999999999865544
Q ss_pred HHHHHHHHHhH-HHhcCHHHHHHHHHHHHhh
Q psy775 966 RTLRMNYLRKR-EKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 966 r~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 995 (1460)
.+.+.+. +++ ...+++...++++++-+++
T Consensus 341 ~~~~~~~-~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 341 QEFSRAA-RNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHH-HHHHHHhCCHHHHHHHHHHHHHh
Confidence 4444443 444 6678888888888776643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=169.30 Aligned_cols=164 Identities=18% Similarity=0.173 Sum_probs=122.9
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+|+++||+++.||+...++|+..+.+++|++ .++.+|.+ +.. .++++.+.+.+ +.+
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~----~l~ivG~g-----~~~----~~~~~~~~~~~-------~~~ 249 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNA----KLLLVGDG-----ELE----EEIKKKVKELG-------LED 249 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCe----EEEEEeCC-----chH----HHHHHHHHhcC-------CCC
Confidence 56789999999999999999999999999999874 56666643 222 23333333322 233
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|. .+++..+|+.||++|.||..||++++++||||| +.|+|+|..+|..+.+.
T Consensus 250 ~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~-----G~PvI~s~~~~~~~~i~---------------- 306 (358)
T cd03812 250 KVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQAS-----GLPCILSDTITKEVDLT---------------- 306 (358)
T ss_pred cEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHh-----CCCEEEEcCCchhhhhc----------------
Confidence 4666666 678999999999999999999999999999999 78999999998766111
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+ .+.++..+.+++++|++|.++++.+..++..+..+..++-.
T Consensus 307 ------------------------------~--------~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 307 ------------------------------D--------LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGLDA 348 (358)
T ss_pred ------------------------------c--------CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccchh
Confidence 0 12345555678999999999999998877776665555444
Q ss_pred hcCHH
Q psy775 979 VHDVN 983 (1460)
Q Consensus 979 ~~~~~ 983 (1460)
..+..
T Consensus 349 ~~~~~ 353 (358)
T cd03812 349 DDEAN 353 (358)
T ss_pred hhhhh
Confidence 44333
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=168.68 Aligned_cols=182 Identities=14% Similarity=0.076 Sum_probs=128.7
Q ss_pred EEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHH
Q psy775 315 RPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQ 394 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~ 394 (1460)
.++|+|+|...+..............++.++++||+.+.||+..+++|+.++.. ++.|+.+|..... .
T Consensus 167 ~~i~ngv~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~--~--- 234 (363)
T cd04955 167 TYIPYGADHVVSSEEDEILKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN--T--- 234 (363)
T ss_pred eeeCCCcChhhcchhhhhHHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc--c---
Confidence 689999998776431110001111344578899999999999999999987632 3557777754321 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC-CCCCcceeeeeeeccCCCCCeEEEcC
Q psy775 395 DLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGVLIVSP 473 (1460)
Q Consensus 395 ~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr-EGfnLValEamAcq~~~~~GvlVlSe 473 (1460)
++.+.+.+ +.+ ..+.+.+.|.++++++..+|+.||++++||.. ||||++++||||| |.|+|+|.
T Consensus 235 ~~~~~~~~---~~~-------~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~-----G~PvI~s~ 299 (363)
T cd04955 235 PYGKLLKE---KAA-------ADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAY-----GCPVLASD 299 (363)
T ss_pred hHHHHHHH---HhC-------CCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHc-----CCCEEEec
Confidence 22333322 111 11235567999999999999999999999999 9999999999999 67789999
Q ss_pred CCCchhcccc-cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 474 FAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 474 ~aGaa~~L~~-allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+|..+.+.+ +.+++|.|. ++++|.+++++++..++.+.++.......++
T Consensus 300 ~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs 350 (363)
T cd04955 300 NPFNREVLGDKAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREKYT 350 (363)
T ss_pred CCccceeecCCeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9888777754 888888776 9999999999876655555444443333455
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-15 Score=180.29 Aligned_cols=159 Identities=11% Similarity=0.076 Sum_probs=115.0
Q ss_pred eecccCchhhhhhhccchhhhc-cC--CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHH
Q psy775 317 LPIAIPYERFVQLAQAAPRVID-TK--QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY 393 (1460)
Q Consensus 317 iPiGID~~~f~~~~~~~~~~~~-~~--~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey 393 (1460)
.+.|||++.|.+.......... .+ .+++++||||.+.||+..+|+||.++.++.|++ .|+++ |++++.
T Consensus 201 ~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~iv-----GdGp~~ 271 (462)
T PLN02846 201 NVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLY-----GSGEDS 271 (462)
T ss_pred cCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEE-----CCCccH
Confidence 3579999988654322111111 22 357899999999999999999999998888875 34444 455555
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC
Q psy775 394 QDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473 (1460)
Q Consensus 394 ~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe 473 (1460)
+++++.+. +.+. . +++|.|..+.+ .+|+.+|+||+||..||||+|.+||||| |.|+|++.
T Consensus 272 ~~L~~~a~----~l~l-------~-~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-----G~PVVa~~ 331 (462)
T PLN02846 272 DEVKAAAE----KLEL-------D-VRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAM-----GKIVVCAN 331 (462)
T ss_pred HHHHHHHH----hcCC-------c-EEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHc-----CCcEEEec
Confidence 55554433 3321 1 34467766555 5799999999999999999999999999 66778888
Q ss_pred CCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 474 FAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 474 ~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
..| .+.+. +|+++ .|.++++++|.++|+.++
T Consensus 332 ~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~ 365 (462)
T PLN02846 332 HPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEP 365 (462)
T ss_pred CCC-cceeecCCceEec--CCHHHHHHHHHHHHccCc
Confidence 765 56663 26566 489999999999998654
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-14 Score=164.48 Aligned_cols=173 Identities=20% Similarity=0.289 Sum_probs=128.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+++++||+++.||+...++|+.++.+++|++ .|+.+|.... . ....++.++.+.+ ..+
T Consensus 201 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~~~----~---~~~~~~~~~~~~~-------~~~ 262 (375)
T cd03821 201 PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDW----HLVIAGPDEG----G---YRAELKQIAAALG-------LED 262 (375)
T ss_pred CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCe----EEEEECCCCc----c---hHHHHHHHHHhcC-------ccc
Confidence 56788999999999999999999999999888874 5666664321 1 1223333333322 234
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|.++.+++..+|+.||+++.||..||||++++|||+| +.|+|+|..+|..+.+.
T Consensus 263 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~PvI~~~~~~~~~~~~---------------- 321 (375)
T cd03821 263 RVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALAC-----GTPVVTTDKVPWQELIE---------------- 321 (375)
T ss_pred eEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhc-----CCCEEEcCCCCHHHHhh----------------
Confidence 577889999999999999999999999999999999999999 78999999888666111
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhH-H
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR-E 977 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~-v 977 (1460)
. ..++++ |.+.++++++|.++++++...+....+. +++ .
T Consensus 322 -------------------------------------~-~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~ 361 (375)
T cd03821 322 -------------------------------------Y-GCGWVV-DDDVDALAAALRRALELPQRLKAMGENG-RALVE 361 (375)
T ss_pred -------------------------------------c-CceEEe-CCChHHHHHHHHHHHhCHHHHHHHHHHH-HHHHH
Confidence 0 123444 4466999999999999885444444444 444 6
Q ss_pred HhcCHHHHHHHHH
Q psy775 978 KVHDVNYWMRSFL 990 (1460)
Q Consensus 978 ~~~~~~~W~~~~l 990 (1460)
.+++++..+++++
T Consensus 362 ~~~s~~~~~~~~~ 374 (375)
T cd03821 362 ERFSWTAIAQQLL 374 (375)
T ss_pred HhcCHHHHHHHhh
Confidence 7778777776654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=166.01 Aligned_cols=219 Identities=17% Similarity=0.127 Sum_probs=148.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
.-|+|.+|+....++ +.+ ..+.++.+.+|..++.... .........+.+-+-+......+
T Consensus 87 ~~Divh~~~~~~~~~---~~~-----~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~---- 146 (335)
T cd03802 87 DFDIVHNHSLHLPLP---FAR-----PLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPW---- 146 (335)
T ss_pred CCCEEEecCcccchh---hhc-----ccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhc----
Confidence 479999999887766 222 2256788888876543211 12233333343333222221110
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
... .++.++|+|+|.+.|... ..++.+++++||+.+.||+..+++|+.+
T Consensus 147 -----------------~~~-~~~~vi~ngvd~~~~~~~--------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~----- 195 (335)
T cd03802 147 -----------------PPL-PWVATVHNGIDLDDYPFR--------GPKGDYLLFLGRISPEKGPHLAIRAARR----- 195 (335)
T ss_pred -----------------ccc-cccEEecCCcChhhCCCC--------CCCCCEEEEEEeeccccCHHHHHHHHHh-----
Confidence 011 467889999999888641 1245689999999999999999999754
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDG 449 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rEG 449 (1460)
++ +.|+++|.... .+ .+...+..... ++ +-+.+.|.++++++..+|+.||++++||. .||
T Consensus 196 ~~----~~l~i~G~~~~---~~--~~~~~~~~~~~-~~---------~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~ 256 (335)
T cd03802 196 AG----IPLKLAGPVSD---PD--YFYREIAPELL-DG---------PDIEYLGEVGGAEKAELLGNARALLFPILWEEP 256 (335)
T ss_pred cC----CeEEEEeCCCC---HH--HHHHHHHHhcc-cC---------CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCC
Confidence 23 34666664321 11 12222222110 11 22556699999999999999999999998 599
Q ss_pred CCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCC
Q psy775 450 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMP 506 (1460)
Q Consensus 450 fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~ 506 (1460)
||++++||||| |.|+|+|..+|..+.+.+ |+++++ +++++++|.+++..+
T Consensus 257 ~~~~~lEAma~-----G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~ 309 (335)
T cd03802 257 FGLVMIEAMAC-----GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD 309 (335)
T ss_pred cchHHHHHHhc-----CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH
Confidence 99999999999 678899999888887753 889987 999999999987653
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=173.81 Aligned_cols=176 Identities=16% Similarity=0.176 Sum_probs=135.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++..|+++||+.+.||+...++|+.++.+++|+. ++.++.+|.+ + ..+++++++.+.+ -.+
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~--~l~~~iiG~g-----~----~~~~l~~~~~~~~-------~~~ 289 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSI--KIKWTHIGGG-----P----LEDTLKELAESKP-------ENI 289 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCc--eEEEEEEeCc-----h----HHHHHHHHHHhcC-------CCc
Confidence 34678999999999999999999999999999876 4666656543 2 2234444444221 123
Q ss_pred EEEEcCCCCHHHHHHHHHH--ccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 819 IRYIYGCISQDELASFYRD--AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~--ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
.+.+.|.++.+|+.++|+. ||+++.||..|||+++.+||||| +.|+|+|..+|..+++.
T Consensus 290 ~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~-----G~PVIas~vgg~~e~i~-------------- 350 (407)
T cd04946 290 SVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSF-----GIPVIATNVGGTPEIVD-------------- 350 (407)
T ss_pred eEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHc-----CCCEEeCCCCCcHHHhc--------------
Confidence 4778899999999999986 78999999999999999999999 78999999998777221
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP-YEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP-~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
++ ..+++++| .|++++|++|.+.++.+....+.+.++...
T Consensus 351 -------------------------------~~--------~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~ 391 (407)
T cd04946 351 -------------------------------NG--------GNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREK 391 (407)
T ss_pred -------------------------------CC--------CcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 11 23466665 589999999999998766656666666555
Q ss_pred HHHhcCHHHHHHHHH
Q psy775 976 REKVHDVNYWMRSFL 990 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l 990 (1460)
...+++.+.+.++|+
T Consensus 392 ~~~~f~~~~~~~~~~ 406 (407)
T cd04946 392 WEENFNASKNYREFA 406 (407)
T ss_pred HHHHcCHHHhHHHhc
Confidence 567889888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.9e-15 Score=177.05 Aligned_cols=143 Identities=9% Similarity=0.104 Sum_probs=109.0
Q ss_pred CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCC--CCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH--LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 340 ~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~--~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
+..+++++||+.+.||+..+++|+..+.+..++. ..++.|+.+|.+ +..++++ +++.+. +..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G-----~~~~~l~----~~~~~~-------~l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKG-----PLKEKYL----ERIKEL-------KLK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecC-----ccHHHHH----HHHHHc-------CCC
Confidence 3468889999999999999999999987642110 113557777633 2223333 333332 234
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEEc---cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCC
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALVT---PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYE 491 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~Vvp---SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D 491 (1460)
.++++.|.++.+++..+|++||++|++ +..+||+++++||||| |.|+|+|..+|..+.+.+ |++|+ |
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-----G~PVI~s~~~~~~eiv~~~~~G~lv~--d 367 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-----GLPVCALDFKCIDELVKHGENGLVFG--D 367 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-----CCCEEEeCCCCHHHHhcCCCCEEEEC--C
Confidence 578887899999999999999999974 3358899999999999 677899999888877743 88884 9
Q ss_pred HHHHHHHHHHHcCC
Q psy775 492 IDAAAEVIHRALTM 505 (1460)
Q Consensus 492 ~~elA~AI~~aL~m 505 (1460)
++++|++|.+++++
T Consensus 368 ~~~la~~i~~ll~~ 381 (415)
T cd03816 368 SEELAEQLIDLLSN 381 (415)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999998
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.8e-15 Score=171.87 Aligned_cols=149 Identities=21% Similarity=0.262 Sum_probs=117.4
Q ss_pred EEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHH
Q psy775 315 RPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQ 394 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~ 394 (1460)
.++|+|+|.+.|.... ...++++++||+.+.||++.+++|+.++ | + .|+.+|. +++.+
T Consensus 177 ~vi~~~~d~~~~~~~~--------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~-----g~~~~ 234 (351)
T cd03804 177 TVIYPPVDTDRFTPAE--------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-K----RLVVIGD-----GPELD 234 (351)
T ss_pred EEECCCCCHhhcCcCC--------CCCCEEEEEEcCccccChHHHHHHHHHC----C-C----cEEEEEC-----ChhHH
Confidence 5788999988875431 2345789999999999999999999775 3 2 2555552 23322
Q ss_pred HHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 395 DLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 395 ~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
.+++ ... .. +.+.|.++++++.++|+.||++++||. ||||++++||||| |.|+|+|..
T Consensus 235 ~l~~-------~~~--------~~-V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-----G~Pvi~~~~ 292 (351)
T cd03804 235 RLRA-------KAG--------PN-VTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-----GTPVIAYGK 292 (351)
T ss_pred HHHh-------hcC--------CC-EEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-----CCCEEEeCC
Confidence 3322 111 12 445699999999999999999999999 9999999999999 677899999
Q ss_pred CCchhcccc---cEEECCCCHHHHHHHHHHHcCCCH
Q psy775 475 AGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 475 aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
+|..+.+.+ |++++|.|++++|++|.++++++.
T Consensus 293 ~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 293 GGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred CCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 888877743 999999999999999999999874
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=168.16 Aligned_cols=273 Identities=21% Similarity=0.197 Sum_probs=187.7
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC--CCCcccccc---CccHHHHHhhcccCceeecccHhHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP--FPPWDIFRL---FPWSDEILQGMLGCDMVGFHIEDYCLNFV 642 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP--fP~~e~fr~---lP~r~eIL~~LL~aDlIGFqt~~yar~FL 642 (1460)
|+||+|++..... + ....+..+.+|-. +..+..... ..........+..+|.+-+.+...++.+.
T Consensus 87 Dii~~~~~~~~~~----~------~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~ 156 (365)
T cd03809 87 DLLHSPHNTAPLL----R------LRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLL 156 (365)
T ss_pred CeeeecccccCcc----c------CCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHH
Confidence 7999999887664 1 2356677777753 222332221 12234455566778888888876666655
Q ss_pred HHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCc
Q psy775 643 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIP 722 (1460)
Q Consensus 643 ~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~ 722 (1460)
+.. +....++.++|+|+|...+..... +. +...
T Consensus 157 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~--------------------------~~-~~~~--- 189 (365)
T cd03809 157 RYL-----------------GVPPDKIVVIPLGVDPRFRPPPAE--------------------------AE-VLRA--- 189 (365)
T ss_pred HHh-----------------CcCHHHEEeeccccCccccCCCch--------------------------HH-HHHH---
Confidence 421 112345778999999865532110 00 1110
Q ss_pred hhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHH
Q psy775 723 YERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 802 (1460)
Q Consensus 723 ~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~ 802 (1460)
....++++|+++||+.+.||+...++|+..+.+++|+ +.|+.+|...... ......+
T Consensus 190 -------------~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~----~~l~i~G~~~~~~----~~~~~~~-- 246 (365)
T cd03809 190 -------------LYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPD----PKLVIVGKRGWLN----EELLARL-- 246 (365)
T ss_pred -------------hcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCC----CCEEEecCCcccc----HHHHHHH--
Confidence 0125678899999999999999999999999988874 4566666543221 1111111
Q ss_pred HHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhh
Q psy775 803 LVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH 882 (1460)
Q Consensus 803 lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~ 882 (1460)
.+. +....+.+.|.++.+++..+|+.||+++.||..||++++++|||+| +.|+|+|+.+|..+.
T Consensus 247 --~~~-------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~-----G~pvI~~~~~~~~e~-- 310 (365)
T cd03809 247 --REL-------GLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMAC-----GTPVIASNISSLPEV-- 310 (365)
T ss_pred --HHc-------CCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcC-----CCcEEecCCCCccce--
Confidence 111 2234578889999999999999999999999999999999999999 778999988776551
Q ss_pred hhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCC
Q psy775 883 EALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMP 962 (1460)
Q Consensus 883 ~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~ 962 (1460)
.+ ++++.++|.|+++++++|.++++.+
T Consensus 311 ------------------------------------------------~~-----~~~~~~~~~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 311 ------------------------------------------------AG-----DAALYFDPLDPEALAAAIERLLEDP 337 (365)
T ss_pred ------------------------------------------------ec-----CceeeeCCCCHHHHHHHHHHHhcCH
Confidence 11 3568899999999999999998765
Q ss_pred HHHHHHHHHHHHhHHHhcCHHHHHHHHH
Q psy775 963 EDERTLRMNYLRKREKVHDVNYWMRSFL 990 (1460)
Q Consensus 963 ~~er~~r~~~~~~~v~~~~~~~W~~~~l 990 (1460)
....+...+ .+++...++++.++++++
T Consensus 338 ~~~~~~~~~-~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 338 ALREELRER-GLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHH-HHHHHHhCCHHHHHHHHh
Confidence 554444444 457888999999988775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=165.57 Aligned_cols=269 Identities=18% Similarity=0.152 Sum_probs=175.6
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 647 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~r 647 (1460)
|+|.+|..+......... ...+.++.+.+|-.++... ..+.+ +..+|.+-+.+....+.+. .
T Consensus 80 dii~~~~~~~~~~~~~~~-----~~~~~~~i~~~h~~~~~~~------~~~~~---~~~~~~vi~~s~~~~~~~~----~ 141 (355)
T cd03819 80 DIVHARSRAPAWSAYLAA-----RRTRPPFVTTVHGFYSVNF------RYNAI---MARGDRVIAVSNFIADHIR----E 141 (355)
T ss_pred CEEEECCCchhHHHHHHH-----HhcCCCEEEEeCCchhhHH------HHHHH---HHhcCEEEEeCHHHHHHHH----H
Confidence 689998866543333222 1234677777885443221 22233 3457777665554443332 1
Q ss_pred HhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHH
Q psy775 648 RLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFV 727 (1460)
Q Consensus 648 lLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~ 727 (1460)
. ++....++.++|+|+|.+.|...... . .....+|+.++.
T Consensus 142 ~-------------~~~~~~k~~~i~ngi~~~~~~~~~~~-~--------------------~~~~~~~~~~~~------ 181 (355)
T cd03819 142 N-------------YGVDPDRIRVIPRGVDLDRFDPGAVP-P--------------------ERILALAREWPL------ 181 (355)
T ss_pred h-------------cCCChhhEEEecCCccccccCccccc-h--------------------HHHHHHHHHcCC------
Confidence 1 12223467889999998877432110 0 001123333321
Q ss_pred HHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q psy775 728 QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 807 (1460)
Q Consensus 728 ~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I 807 (1460)
..++++++++||+.+.||+...++|+..+.+++|+ +.++.+|.+... ..+.+++.+.+.+.
T Consensus 182 ----------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~----~~l~ivG~~~~~-----~~~~~~~~~~~~~~ 242 (355)
T cd03819 182 ----------PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPD----VHLLIVGDAQGR-----RFYYAELLELIKRL 242 (355)
T ss_pred ----------CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCC----eEEEEEECCccc-----chHHHHHHHHHHHc
Confidence 25678999999999999999999999998887665 467777755322 13444454444443
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECC-CccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhh
Q psy775 808 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP-LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 886 (1460)
Q Consensus 808 N~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtS-lrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~ 886 (1460)
+. .+-+.+.|. .+++..+|+.||++++|| ..||++++.+||||| +.|+|+|..+|..+.+.
T Consensus 243 ~~-------~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~-----G~PvI~~~~~~~~e~i~---- 304 (355)
T cd03819 243 GL-------QDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAM-----GRPVIASDHGGARETVR---- 304 (355)
T ss_pred CC-------cceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhc-----CCCEEEcCCCCcHHHHh----
Confidence 22 233566667 678999999999999999 789999999999999 78999999887665111
Q ss_pred cCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH
Q psy775 887 CNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER 966 (1460)
Q Consensus 887 vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er 966 (1460)
....+++++|.|+++++++|..++..+++++
T Consensus 305 -------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 335 (355)
T cd03819 305 -------------------------------------------------PGETGLLVPPGDAEALAQALDQILSLLPEGR 335 (355)
T ss_pred -------------------------------------------------CCCceEEeCCCCHHHHHHHHHHHHhhCHHHH
Confidence 0124688999999999999988888777776
Q ss_pred HHHHHHHHhHHHhc
Q psy775 967 TLRMNYLRKREKVH 980 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~ 980 (1460)
....+..++++.++
T Consensus 336 ~~~~~~a~~~~~~~ 349 (355)
T cd03819 336 AKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHHHHHHHh
Confidence 66555556666543
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.62 E-value=9e-14 Score=160.49 Aligned_cols=180 Identities=21% Similarity=0.254 Sum_probs=134.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|++++.+++|++ .|+.+|...... . ....+..+++.+.+ ..+
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~----~l~i~G~~~~~~-~---~~~~~~~~~i~~~~-------~~~ 247 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDV----RLLVAGETHPDL-E---RYRGEAYALAERLG-------LAD 247 (366)
T ss_pred CCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCe----EEEEeccCccch-h---hhhhhhHhHHHhcC-------CCC
Confidence 46788999999999999999999999998888864 677666443211 1 11111012233322 223
Q ss_pred EEEEcCC-CCHHHHHHHHHHccEEEECCCcc--CCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhh
Q psy775 819 IRYIYGC-ISQDELASFYRDAAVALVTPLRD--GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAA 895 (1460)
Q Consensus 819 vv~~~g~-v~~eel~Aly~~ADv~vvtSlrE--GmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~ 895 (1460)
.+.+.+. ++.+++..+|+.||+++.||..| |++++++|||+| +.|+|+|..+| .+.
T Consensus 248 ~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-----G~PvI~~~~~~-~~~--------------- 306 (366)
T cd03822 248 RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGF-----GKPVISTPVGH-AEE--------------- 306 (366)
T ss_pred cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHc-----CCCEEecCCCC-hhe---------------
Confidence 3555555 99999999999999999999999 999999999999 77999999887 441
Q ss_pred hhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 896 AEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 896 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
+.++ ..+++++|.|++++|++|..+++.+....+.+ +..++
T Consensus 307 ------------------------------i~~~--------~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~-~~~~~ 347 (366)
T cd03822 307 ------------------------------VLDG--------GTGLLVPPGDPAALAEAIRRLLADPELAQALR-ARARE 347 (366)
T ss_pred ------------------------------eeeC--------CCcEEEcCCCHHHHHHHHHHHHcChHHHHHHH-HHHHH
Confidence 1111 24588999999999999999999766555544 44577
Q ss_pred HHHhcCHHHHHHHHHHHH
Q psy775 976 REKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l~~l 993 (1460)
++.+++++.+++++.+-+
T Consensus 348 ~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 348 YARAMSWERVAERYLRLL 365 (366)
T ss_pred HHhhCCHHHHHHHHHHHh
Confidence 888899999998887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.8e-15 Score=180.13 Aligned_cols=239 Identities=8% Similarity=0.036 Sum_probs=148.7
Q ss_pred CCCEEEEeCcchhHHH---HHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAA---NTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP---~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
..|+|-+|..-.+... ....++ .+ ++....||.||.+--+..+..-+.++ -.++.+|+
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArK-----l~-PVVasyHTny~eYl~~y~~g~L~~~l-------------lk~l~~~v 494 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDK-----FN-HVVGVVHTNYLEYIKREKNGALQAFF-------------VKHINNWV 494 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHH-----cC-CeEEEEeCCcHHHHhHhcchhHHHHH-------------HHHHHHHH
Confidence 4699999875433333 222222 13 68889999998533222211111111 12334444
Q ss_pred HH--HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc----cCCeEEEEecCccccCCHHHHHH
Q psy775 288 DC--CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID----TKQKIVLGVDRLDYTKGLVHRLK 361 (1460)
Q Consensus 288 ~~--~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~----~~~kvIL~VgRLd~~KGI~~lL~ 361 (1460)
.. |++++..+..... ...+ .+ ....|||++.|.+....... .+ ...+.+++|||+.+.||+..+|+
T Consensus 495 ~r~hcD~VIaPS~atq~----L~~~--vI-~nVnGVDte~F~P~~r~~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLe 566 (794)
T PLN02501 495 TRAYCHKVLRLSAATQD----LPKS--VI-CNVHGVNPKFLKIGEKVAEE-RELGQQAFSKGAYFLGKMVWAKGYRELID 566 (794)
T ss_pred HHhhCCEEEcCCHHHHH----hccc--ce-eecccccccccCCcchhHHH-HhcCCccccCceEEEEcccccCCHHHHHH
Confidence 44 6777643311111 1111 11 11259999998765332111 11 12345899999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEE
Q psy775 362 AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441 (1460)
Q Consensus 362 Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~ 441 (1460)
|+..+.++.|++ .|+++| +++..+++++. +.+.+. .+. |.|..++. ..+|+.||||
T Consensus 567 Ala~L~~~~pnv----rLvIVG-----DGP~reeLe~l----a~eLgL--------~V~-FLG~~dd~--~~lyasaDVF 622 (794)
T PLN02501 567 LLAKHKNELDGF----NLDVFG-----NGEDAHEVQRA----AKRLDL--------NLN-FLKGRDHA--DDSLHGYKVF 622 (794)
T ss_pred HHHHHHhhCCCe----EEEEEc-----CCccHHHHHHH----HHHcCC--------EEE-ecCCCCCH--HHHHHhCCEE
Confidence 999998888875 455555 34444444443 333322 133 44654433 3789999999
Q ss_pred EEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 442 VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
|+||.+||||+|++||||| |.|||+|...|. ..+. ++++ +.|.++++++|.++|++++.
T Consensus 623 VlPS~sEgFGlVlLEAMA~-----GlPVVATd~pG~-e~V~~g~nGll--~~D~EafAeAI~~LLsd~~~ 684 (794)
T PLN02501 623 INPSISDVLCTATAEALAM-----GKFVVCADHPSN-EFFRSFPNCLT--YKTSEDFVAKVKEALANEPQ 684 (794)
T ss_pred EECCCcccchHHHHHHHHc-----CCCEEEecCCCC-ceEeecCCeEe--cCCHHHHHHHHHHHHhCchh
Confidence 9999999999999999999 677799988764 3342 2443 37899999999999998763
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.7e-14 Score=164.73 Aligned_cols=181 Identities=19% Similarity=0.271 Sum_probs=129.0
Q ss_pred EEEEEeecccCchhhhhhhccchh-hhc--cCCeEEEEecCccc--cCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEEcC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPR-VID--TKQKIVLGVDRLDY--TKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVP 385 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~-~~~--~~~kvIL~VgRLd~--~KGI~~lL~Af~~lL~~-~P~~~~kvvLvqig~p 385 (1460)
.++.++|+|+|.+.|.+......+ ... .++++++.+++... .||+..+++|++.+.++ .|+ +.++.+|..
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~~~~i~G~~ 234 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----IELVVFGAS 234 (365)
T ss_pred CceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----eEEEEeCCC
Confidence 478899999999887543221111 111 44566666666654 99999999999988665 343 556666633
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC-HHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCC
Q psy775 386 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCIS-QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 464 (1460)
Q Consensus 386 sr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~-~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~ 464 (1460)
... . + . .. ...+.+.|.++ .+++..+|+.||++++||..||||++++|||+|
T Consensus 235 ~~~---~------~--~---~~---------~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~---- 287 (365)
T cd03825 235 DPE---I------P--P---DL---------PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALAC---- 287 (365)
T ss_pred chh---h------h--c---cC---------CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhc----
Confidence 210 0 0 0 11 11245568888 889999999999999999999999999999999
Q ss_pred CCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH-hhcC
Q psy775 465 PPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE-KHMN 525 (1460)
Q Consensus 465 ~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v-~~~~ 525 (1460)
+.|+|+|..+|..+.+.+ |+++++.|+++++++|.++++.++..++.+.++ ++.+ .+++
T Consensus 288 -g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~-~~~~~~~~s 350 (365)
T cd03825 288 -GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAA-RELAENEFD 350 (365)
T ss_pred -CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHhcC
Confidence 677899998888887743 899999999999999999998765444444443 3444 3444
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.3e-14 Score=157.89 Aligned_cols=283 Identities=22% Similarity=0.204 Sum_probs=195.1
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc----cCccHHHHHhhcccCceeecccHhHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR----LFPWSDEILQGMLGCDMVGFHIEDYCLNFVD 643 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr----~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~ 643 (1460)
|+|++|+++........ ......++.+.+|-+++...... ...........+..+|.+-+.+....+.+.+
T Consensus 87 Dii~~~~~~~~~~~~~~-----~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 161 (374)
T cd03801 87 DVVHAHDWLALLAAALA-----ARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRE 161 (374)
T ss_pred cEEEEechhHHHHHHHH-----HHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh
Confidence 79999999887655412 23456788888888754432211 1111222333445567777777655555443
Q ss_pred HHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCch
Q psy775 644 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPY 723 (1460)
Q Consensus 644 ~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~ 723 (1460)
. +.....++.++|+|+|...+.... . ..+...
T Consensus 162 ~-----------------~~~~~~~~~~i~~~~~~~~~~~~~------~---------------------~~~~~~---- 193 (374)
T cd03801 162 L-----------------GGVPPEKITVIPNGVDTERFRPAP------R---------------------AARRRL---- 193 (374)
T ss_pred c-----------------CCCCCCcEEEecCcccccccCccc------h---------------------HHHhhc----
Confidence 1 111124688899999986653211 0 001110
Q ss_pred hHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHH
Q psy775 724 ERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 803 (1460)
Q Consensus 724 ~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~l 803 (1460)
....+++.++++||+.+.||+...++|+..+.+++|+ +.|+.+|.+ + ....+.++
T Consensus 194 ------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~l~i~G~~-----~----~~~~~~~~ 248 (374)
T cd03801 194 ------------GIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD----VRLVIVGDG-----P----LREELEAL 248 (374)
T ss_pred ------------CCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCC----eEEEEEeCc-----H----HHHHHHHH
Confidence 0124567899999999999999999999999888875 567766622 2 22334444
Q ss_pred HHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhh
Q psy775 804 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 883 (1460)
Q Consensus 804 v~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~ 883 (1460)
+.+.+. .+.+.+.|.++.+|+..+|+.||+++.|+..||++++++|||+| +.|+|+|..+|..+.+.
T Consensus 249 ~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~-----g~pvI~~~~~~~~~~~~- 315 (374)
T cd03801 249 AAELGL-------GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVE- 315 (374)
T ss_pred HHHhCC-------CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHc-----CCcEEEeCCCChhHHhc-
Confidence 433332 23367789999999999999999999999999999999999999 78999999887666111
Q ss_pred hhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCH
Q psy775 884 ALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPE 963 (1460)
Q Consensus 884 ~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~ 963 (1460)
.-..++++++.|+++++++|.++++.+.
T Consensus 316 ----------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 316 ----------------------------------------------------DGETGLLVPPGDPEALAEAILRLLDDPE 343 (374)
T ss_pred ----------------------------------------------------CCcceEEeCCCCHHHHHHHHHHHHcChH
Confidence 0135689999999999999999999877
Q ss_pred HHHHHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 964 DERTLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 964 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
..++...+........++++.+++++++.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 344 LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 666666666556778899999998887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.3e-14 Score=158.42 Aligned_cols=282 Identities=21% Similarity=0.222 Sum_probs=187.8
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 647 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~r 647 (1460)
|+|++|............ ......++.+..|-+.+....... ......-..+-.+|.+-+.+......|.+..
T Consensus 95 dii~~~~~~~~~~~~~~~----~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-- 167 (377)
T cd03798 95 DLIHAHFAYPDGFAAALL----KRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG-- 167 (377)
T ss_pred CEEEEeccchHHHHHHHH----HHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc--
Confidence 688888433222111111 112335677777765433222111 2233334455678999888887766665421
Q ss_pred HhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHH
Q psy775 648 RLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFV 727 (1460)
Q Consensus 648 lLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~ 727 (1460)
....++.++|+|+|...+...... .. +...
T Consensus 168 ----------------~~~~~~~~i~~~~~~~~~~~~~~~-------------------------~~--~~~~------- 197 (377)
T cd03798 168 ----------------IDPEKVTVIPNGVDTERFSPADRA-------------------------EA--RKLG------- 197 (377)
T ss_pred ----------------CCCCceEEcCCCcCcccCCCcchH-------------------------HH--Hhcc-------
Confidence 123457789999998766431110 00 0000
Q ss_pred HHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q psy775 728 QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 807 (1460)
Q Consensus 728 ~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I 807 (1460)
...++..++++||+.+.||+...++|++.+.+++|+ +.|+.+|.+. .. ..+.+.+++.
T Consensus 198 ---------~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~----~~l~i~g~~~-----~~----~~~~~~~~~~ 255 (377)
T cd03798 198 ---------LPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPD----VHLVIVGDGP-----LR----EALEALAAEL 255 (377)
T ss_pred ---------CCCCceEEEEeccCccccCHHHHHHHHHHHHhcCCC----eEEEEEcCCc-----ch----HHHHHHHHhc
Confidence 124678899999999999999999999999888775 4566555332 12 2233333322
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhc
Q psy775 808 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALIC 887 (1460)
Q Consensus 808 N~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~v 887 (1460)
+..+.+.+.|.++++++..+|+.||+++.||..||++++++|||+| +.|+|+|+.+|..+.+.
T Consensus 256 -------~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~-----G~pvI~~~~~~~~~~~~----- 318 (377)
T cd03798 256 -------GLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMAC-----GLPVVATDVGGIPEIIT----- 318 (377)
T ss_pred -------CCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhc-----CCCEEEecCCChHHHhc-----
Confidence 2334577889999999999999999999999999999999999999 78999999887665111
Q ss_pred CcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHH
Q psy775 888 NPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERT 967 (1460)
Q Consensus 888 nP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~ 967 (1460)
....+++++|.|+++++++|.++++++.. +
T Consensus 319 ------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~ 348 (377)
T cd03798 319 ------------------------------------------------DGENGLLVPPGDPEALAEAILRLLADPWL--R 348 (377)
T ss_pred ------------------------------------------------CCcceeEECCCCHHHHHHHHHHHhcCcHH--H
Confidence 11235899999999999999999998765 3
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhh
Q psy775 968 LRMNYLRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 968 ~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
...+........+++..+++++.+.+.+
T Consensus 349 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 349 LGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 4444456666777888888888776653
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=171.15 Aligned_cols=170 Identities=16% Similarity=0.135 Sum_probs=123.4
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+..|++|||+.+.||+..+++|+.++.+++|++ .|+.+|.+ + .++++++++.+.+.. ..+
T Consensus 319 ~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~----~l~i~G~G-----~----~~~~l~~~i~~~~l~-------~~V 378 (500)
T TIGR02918 319 PFSIITASRLAKEKHIDWLVKAVVKAKKSVPEL----TFDIYGEG-----G----EKQKLQKIINENQAQ-------DYI 378 (500)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhhCCCe----EEEEEECc-----h----hHHHHHHHHHHcCCC-------CeE
Confidence 457999999999999999999999999999974 56666643 2 234566666554322 336
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC-CcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a-G~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.. ++..+|+.||++|.||.+||||++.+||||| |.|+|+|... |..+
T Consensus 379 ~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~-----G~PVI~~dv~~G~~e-------------------- 430 (500)
T TIGR02918 379 HLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGS-----GLGMIGFDVNYGNPT-------------------- 430 (500)
T ss_pred EEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHh-----CCCEEEecCCCCCHH--------------------
Confidence 677765 5778899999999999999999999999999 7899999986 5555
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC----CC----HHHHHHHHHHHhCCCHHHHHHHHH
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP----YE----IDAAAEVIHRALTMPEDERTLRMN 971 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP----~d----~~~iA~ai~~aL~m~~~er~~r~~ 971 (1460)
+|.++ .++++|+| .| ++++|++|.++++ ++ .+....+
T Consensus 431 -------------------------iI~~g--------~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~-~~~~~~~ 475 (500)
T TIGR02918 431 -------------------------FIEDN--------KNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SN-DIDAFHE 475 (500)
T ss_pred -------------------------HccCC--------CCEEEEeCCccccchhHHHHHHHHHHHHHhC-hH-HHHHHHH
Confidence 11222 34577763 34 8999999999994 33 3333333
Q ss_pred HHHhHHHhcCHHHHHHHHHHHH
Q psy775 972 YLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 972 ~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
..++....++...-++++.+-+
T Consensus 476 ~a~~~a~~fs~~~v~~~w~~ll 497 (500)
T TIGR02918 476 YSYQIAEGFLTANIIEKWKKLV 497 (500)
T ss_pred HHHHHHHhcCHHHHHHHHHHHH
Confidence 4466677777766666655444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=158.89 Aligned_cols=264 Identities=20% Similarity=0.198 Sum_probs=179.0
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC--CCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP--FPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 645 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP--fP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c 645 (1460)
|+|++|..+.......+... ....+..+.+|-+ ++.+.. ..+-+.+-.+|.+-..+....+.+.+.
T Consensus 81 Dii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~vi~~s~~~~~~l~~~- 148 (355)
T cd03799 81 DHIHAHFGTTPATVAMLASR----LGGIPYSFTAHGKDIFRSPDA-------IDLDEKLARADFVVAISEYNRQQLIRL- 148 (355)
T ss_pred CEEEECCCCchHHHHHHHHH----hcCCCEEEEEecccccccCch-------HHHHHHHhhCCEEEECCHHHHHHHHHh-
Confidence 78998876543333333321 2245666667753 222211 233344567898888888766655431
Q ss_pred HHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhH
Q psy775 646 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYER 725 (1460)
Q Consensus 646 ~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r 725 (1460)
++....++.++|+|+|.+.|.... .
T Consensus 149 ----------------~~~~~~~~~vi~~~~d~~~~~~~~------~--------------------------------- 173 (355)
T cd03799 149 ----------------LGCDPDKIHVVHCGVDLERFPPRP------P--------------------------------- 173 (355)
T ss_pred ----------------cCCCcccEEEEeCCcCHHHcCCcc------c---------------------------------
Confidence 122345688899999987664211 0
Q ss_pred HHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 726 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 726 ~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
....++..|+++||+.+.||+...++|++++.+++|+ +.|+.+|... ...++.+.+.
T Consensus 174 ----------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~----~~l~i~G~~~---------~~~~~~~~~~ 230 (355)
T cd03799 174 ----------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGID----FRLDIVGDGP---------LRDELEALIA 230 (355)
T ss_pred ----------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCC----eEEEEEECCc---------cHHHHHHHHH
Confidence 0013467789999999999999999999998877665 4666666432 1233444444
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCc------cCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlr------EGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+.+ ..+.+.+.|.++.+|+..+|+.||+++.||.. |||+++.+|||+| +.|+|+|..+|..+
T Consensus 231 ~~~-------~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~~ 298 (355)
T cd03799 231 ELG-------LEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM-----GLPVISTDVSGIPE 298 (355)
T ss_pred HcC-------CCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHc-----CCCEEecCCCCcch
Confidence 432 23458889999999999999999999999999 9999999999999 78899999877655
Q ss_pred hhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh
Q psy775 880 QMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL 959 (1460)
Q Consensus 880 ~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL 959 (1460)
.+. ....+++++|.|+++++++|.+++
T Consensus 299 ~i~-----------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~ 325 (355)
T cd03799 299 LVE-----------------------------------------------------DGETGLLVPPGDPEALADAIERLL 325 (355)
T ss_pred hhh-----------------------------------------------------CCCceEEeCCCCHHHHHHHHHHHH
Confidence 111 112468999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhHH-HhcCHHHHHH
Q psy775 960 TMPEDERTLRMNYLRKRE-KVHDVNYWMR 987 (1460)
Q Consensus 960 ~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 987 (1460)
+++...++.+.+. ++++ ..+++...++
T Consensus 326 ~~~~~~~~~~~~a-~~~~~~~~s~~~~~~ 353 (355)
T cd03799 326 DDPELRREMGEAG-RARVEEEFDIRKQAA 353 (355)
T ss_pred hCHHHHHHHHHHH-HHHHHHhcCHHHHhh
Confidence 9876644444444 4444 5566665544
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.59 E-value=5e-14 Score=172.61 Aligned_cols=203 Identities=12% Similarity=0.140 Sum_probs=128.9
Q ss_pred CCCEEEEE-EcCccc-cCCHHHHHHHHHHHHHhCCC-CCCCEEEEEEEcCCCCCh---------hHHHHHHHHHHHHHHH
Q psy775 739 TKQKIVLG-VDRLDY-TKGLVHRLKAFETLLEKHPE-HLEKVTLLQIAVPSRTDV---------KEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 739 ~~kkiIl~-VdRLd~-~KGi~~kL~Afe~fL~~~P~-~~~kVvLvqi~~psr~~~---------~~y~~l~~el~~lv~~ 806 (1460)
.+++++++ +||+++ .||++..|+|+.++=..--. -.++-|+.-+..|..+.. .-.+++++.+..+.++
T Consensus 295 ~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~ 374 (590)
T cd03793 295 LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEK 374 (590)
T ss_pred CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHH
Confidence 57788888 899999 99999999999987541111 111223344455654331 2334566666666666
Q ss_pred Hhcc---------C-----------------------------------------------------CC-CCCccEEEEc
Q psy775 807 INGR---------F-----------------------------------------------------TT-PNWSPIRYIY 823 (1460)
Q Consensus 807 IN~~---------~-----------------------------------------------------~~-~~~~pvv~~~ 823 (1460)
|+.+ . .. .+--.|+|..
T Consensus 375 i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P 454 (590)
T cd03793 375 IGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHP 454 (590)
T ss_pred hhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcc
Confidence 6655 1 00 0011233333
Q ss_pred CCCC------HHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 824 GCIS------QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 824 g~v~------~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
..++ ..++..+|+.||++|+||.+||||++++||||| +.|+|.|..+|...-+.
T Consensus 455 ~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~-----G~PvI~t~~~gf~~~v~--------------- 514 (590)
T cd03793 455 EFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM-----GIPSITTNLSGFGCFME--------------- 514 (590)
T ss_pred cccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc-----CCCEEEccCcchhhhhH---------------
Confidence 3333 235788999999999999999999999999999 78999999999865111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeC-------CCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN-------PYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVn-------P~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
|..|. ..+.++.|. |.+++++|++|.+.+.++..++....
T Consensus 515 -------------------------------E~v~~--~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r 561 (590)
T cd03793 515 -------------------------------EHIED--PESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQR 561 (590)
T ss_pred -------------------------------HHhcc--CCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 11110 002345555 56788999999998877655544444
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 971 NYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 971 ~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
....+.....++.+-+...++...
T Consensus 562 ~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 562 NRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 333455556666666665555543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.8e-13 Score=154.85 Aligned_cols=172 Identities=19% Similarity=0.241 Sum_probs=127.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH-HHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG-RINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~-~IN~~~~~~~~~ 817 (1460)
.++++++++||+.+.||+...++|+.++.+++|++ .|+.+|.+... .+...... +.+ ..
T Consensus 191 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~~~~---------~~~~~~~~~~~~-------~~ 250 (365)
T cd03807 191 EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNA----RLLLVGDGPDR---------ANLELLALKELG-------LE 250 (365)
T ss_pred CCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCe----EEEEecCCcch---------hHHHHHHHHhcC-------CC
Confidence 56788999999999999999999999998888764 56666644311 11222222 221 22
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+.+.+.|. .+|+..+|+.||+++.||..||++++++|||+| +.|+|+|..+|..+.+.
T Consensus 251 ~~v~~~g~--~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~-----g~PvI~~~~~~~~e~~~--------------- 308 (365)
T cd03807 251 DKVILLGE--RSDVPALLNALDVFVLSSLSEGFPNVLLEAMAC-----GLPVVATDVGDNAELVG--------------- 308 (365)
T ss_pred ceEEEccc--cccHHHHHHhCCEEEeCCccccCCcHHHHHHhc-----CCCEEEcCCCChHHHhh---------------
Confidence 34555564 467999999999999999999999999999999 78999999888666111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
+.++++++.|+++++++|.+++++++..++...+ .++++
T Consensus 309 ----------------------------------------~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~-~~~~~ 347 (365)
T cd03807 309 ----------------------------------------DTGFLVPPGDPEALAEAIEALLADPALRQALGEA-ARERI 347 (365)
T ss_pred ----------------------------------------cCCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHH-HHHHH
Confidence 1357899999999999999999987554444444 44554
Q ss_pred -HhcCHHHHHHHHHHHH
Q psy775 978 -KVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 978 -~~~~~~~W~~~~l~~l 993 (1460)
..+++...++.+.+-+
T Consensus 348 ~~~~s~~~~~~~~~~~y 364 (365)
T cd03807 348 EENFSIEAMVEAYEELY 364 (365)
T ss_pred HHhCCHHHHHHHHHHHh
Confidence 4578888888776643
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=163.50 Aligned_cols=265 Identities=17% Similarity=0.164 Sum_probs=173.8
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCCccc--cccC-ccHHHHHhhcccCceeecccHhHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPPWDI--FRLF-PWSDEILQGMLGCDMVGFHIEDYCLNFVD 643 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~~e~--fr~l-P~r~eIL~~LL~aDlIGFqt~~yar~FL~ 643 (1460)
|++.+|-.+.... .+. ......+..+++|.. +..... .... ...+.++..+-.+|.|-+.+..-.+.+.+
T Consensus 101 diii~~~~~~~~~--~~~----~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 101 DVFILDRPTLDGQ--ALL----NMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CEEEECCccccch--hHH----hccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 6666655554432 122 233455677888864 221111 1111 12456667778889998888766666543
Q ss_pred HHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCch
Q psy775 644 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPY 723 (1460)
Q Consensus 644 ~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~ 723 (1460)
.. + ...++.++|+|++...+.... . .
T Consensus 175 ~~----~--------------~~~~v~~ip~g~~~~~~~~~~---~--~------------------------------- 200 (372)
T cd04949 175 QF----G--------------NYNPIYTIPVGSIDPLKLPAQ---F--K------------------------------- 200 (372)
T ss_pred Hh----C--------------CCCceEEEcccccChhhcccc---h--h-------------------------------
Confidence 21 1 011267899999976553210 0 0
Q ss_pred hHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHH
Q psy775 724 ERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 803 (1460)
Q Consensus 724 ~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~l 803 (1460)
...+..++++||+.+.||+...++|+.++.+++|++ .|+.+|.+.. . .++..+
T Consensus 201 --------------~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~g~~-----~----~~~~~~ 253 (372)
T cd04949 201 --------------QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDA----TLDIYGYGDE-----E----EKLKEL 253 (372)
T ss_pred --------------hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCc----EEEEEEeCch-----H----HHHHHH
Confidence 023457899999999999999999999999999975 5666665431 1 223333
Q ss_pred HHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC-Ccchhhh
Q psy775 804 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQMH 882 (1460)
Q Consensus 804 v~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a-G~~~~L~ 882 (1460)
+.+.+. ...+.+.|. .+++..+|+.||+++.||..|||+++.+|||+| +.|+|+|..+ |..+.
T Consensus 254 ~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-----G~PvI~~~~~~g~~~~-- 317 (372)
T cd04949 254 IEELGL-------EDYVFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-----GLPVISYDVNYGPSEI-- 317 (372)
T ss_pred HHHcCC-------cceEEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhC-----CCCEEEecCCCCcHHH--
Confidence 333222 234666773 567999999999999999999999999999999 7799999876 54441
Q ss_pred hhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCC
Q psy775 883 EALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMP 962 (1460)
Q Consensus 883 ~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~ 962 (1460)
|.++ ..+++++|.|++++|++|..+++.+
T Consensus 318 -------------------------------------------v~~~--------~~G~lv~~~d~~~la~~i~~ll~~~ 346 (372)
T cd04949 318 -------------------------------------------IEDG--------ENGYLVPKGDIEALAEAIIELLNDP 346 (372)
T ss_pred -------------------------------------------cccC--------CCceEeCCCcHHHHHHHHHHHHcCH
Confidence 1111 3568999999999999999999987
Q ss_pred HHHHHHHHHHHHhHHHhcCHHHHHH
Q psy775 963 EDERTLRMNYLRKREKVHDVNYWMR 987 (1460)
Q Consensus 963 ~~er~~r~~~~~~~v~~~~~~~W~~ 987 (1460)
...++.+.+ .++...++++..+++
T Consensus 347 ~~~~~~~~~-a~~~~~~~s~~~~~~ 370 (372)
T cd04949 347 KLLQKFSEA-AYENAERYSEENVWE 370 (372)
T ss_pred HHHHHHHHH-HHHHHHHhhHHHHHh
Confidence 554444444 344566666666554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.1e-14 Score=170.75 Aligned_cols=177 Identities=14% Similarity=0.142 Sum_probs=129.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..+|.+|+|+.+.||....++|+.++++++|++ .|+.+|.+ + .++++++++.+.+. ..
T Consensus 396 ~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdi----rLvIVGdG-----~----~~eeLk~la~elgL-------~d 455 (578)
T PRK15490 396 DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPAT----RFVLVGDG-----D----LRAEAQKRAEQLGI-------LE 455 (578)
T ss_pred CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCe----EEEEEeCc-----h----hHHHHHHHHHHcCC-------CC
Confidence 44568899999999999999999999999999874 57767643 2 34556666655442 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|. .+++..+|+.||++|+||.+|||+++++||||| +.|+|+|..+|..+.
T Consensus 456 ~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~-----GlPVVATdvGG~~Ei------------------ 510 (578)
T PRK15490 456 RILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMV-----GVPVISTPAGGSAEC------------------ 510 (578)
T ss_pred cEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHh-----CCCEEEeCCCCcHHH------------------
Confidence 3777776 468899999999999999999999999999999 789999999887771
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCH--HHHHHHHHHHHhH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPE--DERTLRMNYLRKR 976 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~--~er~~r~~~~~~~ 976 (1460)
|.++ .++++|+|.|++++++++..+..+.. .++....+..+++
T Consensus 511 ---------------------------V~dG--------~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~ 555 (578)
T PRK15490 511 ---------------------------FIEG--------VSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSF 555 (578)
T ss_pred ---------------------------cccC--------CcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 34689999999999988754433222 1222111233454
Q ss_pred H-HhcCHHHHHHHHHHHHhh
Q psy775 977 E-KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 977 v-~~~~~~~W~~~~l~~l~~ 995 (1460)
+ .+++++..+.++++.++.
T Consensus 556 V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 556 LQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHhhCCHHHHHHHHHHHHHh
Confidence 4 568888888877776653
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.2e-14 Score=179.70 Aligned_cols=174 Identities=16% Similarity=0.128 Sum_probs=132.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+.++|++|+|+++.||+...++||.++++++|++ .|+.+|.+. .++++++++.+.+- ..
T Consensus 515 ~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~----~LvIvG~G~---------~~~~L~~l~~~lgL-------~~ 574 (694)
T PRK15179 515 DARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKV----RFIMVGGGP---------LLESVREFAQRLGM-------GE 574 (694)
T ss_pred CCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCe----EEEEEccCc---------chHHHHHHHHHcCC-------CC
Confidence 34678999999999999999999999999999975 577777532 23456666665543 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|..+ ++..+|+.||++|+||.+|||+++++|||+| +.|+|+|..+|..+.+
T Consensus 575 ~V~flG~~~--dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~-----G~PVVat~~gG~~EiV----------------- 630 (694)
T PRK15179 575 RILFTGLSR--RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFS-----GVPVVTTLAGGAGEAV----------------- 630 (694)
T ss_pred cEEEcCCcc--hHHHHHHhcCEEEeccccccchHHHHHHHHc-----CCeEEEECCCChHHHc-----------------
Confidence 477888754 7889999999999999999999999999999 7899999998877611
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCH--HHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEI--DAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~--~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
.++ ..+++|+|.|+ ++++++|.+++.........+.+. +++
T Consensus 631 ----------------------------~dg--------~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~a-r~~ 673 (694)
T PRK15179 631 ----------------------------QEG--------VTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKA-ADW 673 (694)
T ss_pred ----------------------------cCC--------CCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHH-HHH
Confidence 111 24689998875 689999988887654444444443 444
Q ss_pred H-HhcCHHHHHHHHHHHH
Q psy775 977 E-KVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 977 v-~~~~~~~W~~~~l~~l 993 (1460)
+ ..+++...++++++-+
T Consensus 674 a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 674 ASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHhCCHHHHHHHHHHHh
Confidence 4 5788888877776654
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.58 E-value=5e-14 Score=168.94 Aligned_cols=180 Identities=16% Similarity=0.227 Sum_probs=124.1
Q ss_pred EEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHH----HHHHHHHHhCCCCCCcEEEEEEEcCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRL----KAFETLLEKHPEHLEKVTLLQIAVPSR 387 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL----~Af~~lL~~~P~~~~kvvLvqig~psr 387 (1460)
.++.++|+|||.+.|.+....... ...++++|+++||+++.||+..++ +++..+.+++|+++ |+++|..
T Consensus 196 ~~v~vipngvd~~~f~~~~~~~~~-~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g-- 268 (397)
T TIGR03087 196 GRITAFPNGVDADFFSPDRDYPNP-YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK-- 268 (397)
T ss_pred CCeEEeecccchhhcCCCccccCC-CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC--
Confidence 467889999999988653221111 113567899999999999999988 56777777888763 6555532
Q ss_pred CChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CCCCCcceeeeeeeccCCCC
Q psy775 388 TDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPP 466 (1460)
Q Consensus 388 ~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rEGfnLValEamAcq~~~~~ 466 (1460)
+. . ++.++. .. .. +.+.|.++ ++..+|+.||++|+||. .||++++++||||| |
T Consensus 269 ---~~-~----~~~~l~----~~------~~-V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~-----G 322 (397)
T TIGR03087 269 ---PS-P----AVRALA----AL------PG-VTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAM-----A 322 (397)
T ss_pred ---Ch-H----HHHHhc----cC------CC-eEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHc-----C
Confidence 11 1 222221 11 11 34568887 67899999999999997 59999999999999 6
Q ss_pred CeEEEcCCCCchhc-c-cccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 467 GVLIVSPFAGAGEQ-M-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 467 GvlVlSe~aGaa~~-L-~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.|+|+|..++.... . ..++++. .|++++|++|.++++++...++++.++......+++
T Consensus 323 ~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fs 382 (397)
T TIGR03087 323 KPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYH 382 (397)
T ss_pred CCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCC
Confidence 67788876432111 1 2378885 899999999999998766555555444444445555
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=158.52 Aligned_cols=163 Identities=22% Similarity=0.326 Sum_probs=124.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+++||+.+.||+...++|+.++.++.|+ +.|+.+|.+. ..+++++++.+.+. .+
T Consensus 200 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~----~~l~i~G~~~---------~~~~~~~~~~~~~~-------~~ 259 (374)
T cd03817 200 EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPD----VKLVIVGDGP---------EREELEELARELGL-------AD 259 (374)
T ss_pred CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCC----eEEEEEeCCc---------hHHHHHHHHHHcCC-------CC
Confidence 4578899999999999999999999998887665 4566666431 22344444444332 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|.++++++..+|+.||+++.||..||+|++.+|||+| +.|+|+|..+|..+.+
T Consensus 260 ~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-----g~PvI~~~~~~~~~~i----------------- 317 (374)
T cd03817 260 RVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAA-----GLPVVAVDAPGLPDLV----------------- 317 (374)
T ss_pred cEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-----CCcEEEeCCCChhhhe-----------------
Confidence 477789999999999999999999999999999999999999 7899999988766511
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
.. -..++++++.|. +++++|.++++++...++.+.+ .++++.
T Consensus 318 ----------------------------~~--------~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~-~~~~~~ 359 (374)
T cd03817 318 ----------------------------AD--------GENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKN-AEESAE 359 (374)
T ss_pred ----------------------------ec--------CceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHH-HHHHHH
Confidence 01 135688999888 9999999999987765444433 455665
Q ss_pred hcC
Q psy775 979 VHD 981 (1460)
Q Consensus 979 ~~~ 981 (1460)
.++
T Consensus 360 ~~~ 362 (374)
T cd03817 360 KFS 362 (374)
T ss_pred HHH
Confidence 554
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=162.61 Aligned_cols=172 Identities=20% Similarity=0.287 Sum_probs=129.7
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+++.++++||+.+.||+...++|+.++.+.+|++ .|+.+|.+. .. ..+.+++.+.+ ..+
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~----~l~i~G~~~-----~~----~~~~~~~~~~~-------~~~ 235 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDW----KLRIVGDGP-----ER----EALEALIKELG-------LED 235 (348)
T ss_pred CCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCe----EEEEEeCCC-----CH----HHHHHHHHHcC-------CCC
Confidence 34678999999999999999999999998888874 566555332 11 23333444433 234
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|. .+++..+|+.||+++.||..||||++.+|||+| +.|+|+|...|..+.+
T Consensus 236 ~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~~~~----------------- 291 (348)
T cd03820 236 RVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAF-----GLPVISFDCPTGPSEI----------------- 291 (348)
T ss_pred eEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHc-----CCCEEEecCCCchHhh-----------------
Confidence 5667766 789999999999999999999999999999999 7889999876544310
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+. ....++++++.|+++++++|.++++.++..++.+.+. .+.++
T Consensus 292 ---------------------------~~--------~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~ 335 (348)
T cd03820 292 ---------------------------IE--------DGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANA-RESAE 335 (348)
T ss_pred ---------------------------hc--------cCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHH
Confidence 00 0125689999999999999999998776655555555 77888
Q ss_pred hcCHHHHHHHHH
Q psy775 979 VHDVNYWMRSFL 990 (1460)
Q Consensus 979 ~~~~~~W~~~~l 990 (1460)
+++++.+++++.
T Consensus 336 ~~~~~~~~~~~~ 347 (348)
T cd03820 336 RFSIENIIKQWE 347 (348)
T ss_pred HhCHHHHHHHhc
Confidence 888888877653
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.3e-13 Score=156.75 Aligned_cols=169 Identities=20% Similarity=0.252 Sum_probs=130.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|+.++.++ |++ .|+.+|.+. +. ..+. .. .+
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~----~l~i~G~~~-----~~----~~~~----~~---------~~ 247 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPV----RLVIVGDGP-----AR----ARLE----AR---------YP 247 (364)
T ss_pred CCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCc----eEEEEeCCc-----hH----HHHh----cc---------CC
Confidence 4567899999999999999999999998776 654 566666431 11 1111 11 12
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
-+.+.|.++.+++..+|+.||+++.||..||+|++++||||| +.|+|+|..+|..+.+.
T Consensus 248 ~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~-----g~PvI~~~~~~~~~~i~---------------- 306 (364)
T cd03814 248 NVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMAS-----GLPVVAPDAGGPADIVT---------------- 306 (364)
T ss_pred cEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHc-----CCCEEEcCCCCchhhhc----------------
Confidence 256778899999999999999999999999999999999999 78999999888666211
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
....+++++|.|.++++++|.++++.++...+.. +..++.+.
T Consensus 307 -------------------------------------~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~-~~~~~~~~ 348 (364)
T cd03814 307 -------------------------------------DGENGLLVEPGDAEAFAAALAALLADPELRRRMA-ARARAEAE 348 (364)
T ss_pred -------------------------------------CCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHh
Confidence 1134689999999999999999998766554444 44466668
Q ss_pred hcCHHHHHHHHHHHH
Q psy775 979 VHDVNYWMRSFLKGM 993 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~l 993 (1460)
.+++..+++++++-+
T Consensus 349 ~~~~~~~~~~~~~~~ 363 (364)
T cd03814 349 RRSWEAFLDNLLEAY 363 (364)
T ss_pred hcCHHHHHHHHHHhh
Confidence 889999988887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=162.11 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=122.2
Q ss_pred CCEEEEEEcCcc--ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 740 KQKIVLGVDRLD--YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 740 ~kkiIl~VdRLd--~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
++++++++||+. +.||+...++|+.++. + ++.|+.+|.+. + ++++++++++.|..
T Consensus 179 ~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~----~~~l~ivG~g~-----~----~~~l~~~~~~~~l~------- 235 (359)
T PRK09922 179 KPAVFLYVGRLKFEGQKNVKELFDGLSQTT---G----EWQLHIIGDGS-----D----FEKCKAYSRELGIE------- 235 (359)
T ss_pred CCcEEEEEEEEecccCcCHHHHHHHHHhhC---C----CeEEEEEeCCc-----c----HHHHHHHHHHcCCC-------
Confidence 456789999996 5699999999998752 2 46777777542 2 23455555554322
Q ss_pred cEEEEcCCC--CHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CCCcchhhhhhhhcCcccchh
Q psy775 818 PIRYIYGCI--SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 818 pvv~~~g~v--~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
..+.|.|.+ +.+++..+|+.||++++||..|||+++++||||| +.|+|+|. .+|..++
T Consensus 236 ~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~-----G~Pvv~s~~~~g~~ei-------------- 296 (359)
T PRK09922 236 QRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSY-----GIPCISSDCMSGPRDI-------------- 296 (359)
T ss_pred CeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHc-----CCCEEEeCCCCChHHH--------------
Confidence 337777865 4589999999999999999999999999999999 78999999 7776651
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
|.++ ..+++++|.|++++|++|.+.++.+.... .+.+.
T Consensus 297 -------------------------------v~~~--------~~G~lv~~~d~~~la~~i~~l~~~~~~~~---~~~~~ 334 (359)
T PRK09922 297 -------------------------------IKPG--------LNGELYTPGNIDEFVGKLNKVISGEVKYQ---HDAIP 334 (359)
T ss_pred -------------------------------ccCC--------CceEEECCCCHHHHHHHHHHHHhCcccCC---HHHHH
Confidence 1111 34589999999999999999998875311 12223
Q ss_pred hHHHhcCHHHHHHHHHHHHhhh
Q psy775 975 KREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
+.+..+..+...+++.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~ 356 (359)
T PRK09922 335 NSIERFYEVLYFKNLNNALFSK 356 (359)
T ss_pred HHHHHhhHHHHHHHHHHHHHHH
Confidence 3334444455555555555443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-14 Score=170.39 Aligned_cols=161 Identities=11% Similarity=0.114 Sum_probs=116.1
Q ss_pred EEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHH-----------------hCCCCCCc
Q psy775 314 IRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE-----------------KHPEHLEK 376 (1460)
Q Consensus 314 V~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~-----------------~~P~~~~k 376 (1460)
+.++|+|+ .+.|.+.... .........+++++||+.+.||+..+++|+..+.. ++|+
T Consensus 188 i~vi~n~~-~~~f~~~~~~-~~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~---- 261 (371)
T PLN02275 188 ATVLYDQP-PEFFRPASLE-IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR---- 261 (371)
T ss_pred eEEECCCC-HHHcCcCCch-hcccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----
Confidence 67888884 4666543211 11111344678899999999999999999988752 2454
Q ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc---CCCCCCcc
Q psy775 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP---LRDGMNLV 453 (1460)
Q Consensus 377 vvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS---lrEGfnLV 453 (1460)
+.|+.+|.+ ++.+++++. +.+.+ ...++++.+.++.+++..+|++||++|+|+ ..|||+.+
T Consensus 262 i~l~ivG~G-----~~~~~l~~~----~~~~~-------l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~ 325 (371)
T PLN02275 262 LLFIITGKG-----PQKAMYEEK----ISRLN-------LRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMK 325 (371)
T ss_pred eEEEEEeCC-----CCHHHHHHH----HHHcC-------CCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHH
Confidence 557777643 333344443 33322 234677767899999999999999999853 34899999
Q ss_pred eeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc
Q psy775 454 AKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL 503 (1460)
Q Consensus 454 alEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL 503 (1460)
.+||||| |.|+|+|..+|..+.+.+ |++|+ |++++|++|.++|
T Consensus 326 llEAmA~-----G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 326 VVDMFGC-----GLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHHHHHC-----CCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999999 677799998888877742 88996 6999999998875
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=163.15 Aligned_cols=183 Identities=14% Similarity=0.052 Sum_probs=130.6
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++.++.+++|+.+.||+..+++|++++.+++|+ +.++.+|... . + .++. .++
T Consensus 141 ~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~~~----~---~--~~l~----~~~----------- 192 (331)
T PHA01630 141 HPCVLAILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSSNM----L---D--PRLF----GLN----------- 192 (331)
T ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeCcc----c---c--hhhc----ccc-----------
Confidence 345677788999999999999999999888776 4666666211 0 0 1111 011
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
-+.+.++.+++..+|+.||++++||..||||++++||||| +.|+|+|..+|..+.+.
T Consensus 193 -~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~-----G~PVIas~~gg~~E~i~----------------- 249 (331)
T PHA01630 193 -GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL-----GLDVVVTEKGAWSEWVL----------------- 249 (331)
T ss_pred -ceeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc-----CCCEEEeCCCCchhhcc-----------------
Confidence 1235688999999999999999999999999999999999 78999999888776211
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEecccc-----CCcccccceEEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHH
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFA-----GAGEQMHEALICNPYEIDAAAEVIHRALTMP--EDERTLRMNY 972 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~-----G~~~~l~~allVnP~d~~~iA~ai~~aL~m~--~~er~~r~~~ 972 (1460)
++..|.+|-.+.. .+ .-+.+++++| |.+++++++.++|..+ ++.++...++
T Consensus 250 -------------------~~~ng~lv~~~~~~~~~~~~--~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~ 307 (331)
T PHA01630 250 -------------------SNLDVYWIKSGRKPKLWYTN--PIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGR 307 (331)
T ss_pred -------------------CCCceEEeeecccccccccC--CcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 1223444433210 00 0134678888 7888999999999875 4445555555
Q ss_pred HHhHHHhcCHHHHHHHHHHHHhh
Q psy775 973 LRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 973 ~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
...+.++++++..++++++-++.
T Consensus 308 ~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 308 AILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhc
Confidence 56678899999999998887753
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-14 Score=150.53 Aligned_cols=152 Identities=30% Similarity=0.501 Sum_probs=114.9
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~-~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
.++++|+++||+++.||+..+++|+..+.++ .|++ .++.+| +++....++ ..+...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G-----~~~~~~~~~----~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVG-----DGEYKKELK----NLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEES-----HCCHHHHHH----HHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEc-----ccccccccc----ccccccccc------c
Confidence 5788999999999999999999999999875 6654 466555 222222333 333332221 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHH
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDA 494 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~e 494 (1460)
.+. +.+.++.+++..+|+.||++|.||..||||++++|||+| +.|+|+|..+|..+.+.+ |++++|.|+++
T Consensus 74 ~i~-~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-----g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~ 147 (172)
T PF00534_consen 74 NII-FLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-----GCPVIASDIGGNNEIINDGVNGFLFDPNDIEE 147 (172)
T ss_dssp TEE-EEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-----T-EEEEESSTHHHHHSGTTTSEEEESTTSHHH
T ss_pred ccc-ccccccccccccccccceecccccccccccccccccccc-----ccceeeccccCCceeeccccceEEeCCCCHHH
Confidence 244 458888999999999999999999999999999999999 788899998777777743 79999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTLRMN 515 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~R~~ 515 (1460)
++++|.+++.+++..+.++.+
T Consensus 148 l~~~i~~~l~~~~~~~~l~~~ 168 (172)
T PF00534_consen 148 LADAIEKLLNDPELRQKLGKN 168 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHH
Confidence 999999999977544444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.1e-13 Score=153.01 Aligned_cols=277 Identities=17% Similarity=0.132 Sum_probs=177.4
Q ss_pred Cceeecccc-ccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc-----C---ccHHHHH-hhcccCceeecccHhH
Q psy775 568 PLVWIHDYH-LMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL-----F---PWSDEIL-QGMLGCDMVGFHIEDY 637 (1460)
Q Consensus 568 diIwIhDYh-L~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~-----l---P~r~eIL-~~LL~aDlIGFqt~~y 637 (1460)
|+|++|... ....+.... ......++.+.+|-.+|....... . .....+. ..+-.+|.|-+.+...
T Consensus 101 D~v~~~~~~~~~~~~~~~~----~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 101 DVIIATSPPLLIALAALLL----ARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred CEEEEcCChHHHHHHHHHH----HHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 789999733 333333222 223356788888865543221110 0 1111121 2345678888888877
Q ss_pred HHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHh
Q psy775 638 CLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717 (1460)
Q Consensus 638 ar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~ 717 (1460)
++.|.. ++....++.++|+|+|...+...... .. +.
T Consensus 177 ~~~~~~------------------~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------~~-~~ 212 (394)
T cd03794 177 REYLVR------------------RGVPPEKISVIPNGVDLELFKPPPAD-------------------------ES-LR 212 (394)
T ss_pred HHHHHh------------------cCCCcCceEEcCCCCCHHHcCCccch-------------------------hh-hh
Confidence 776551 11223467889999998765432110 00 11
Q ss_pred hhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHH
Q psy775 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLK 797 (1460)
Q Consensus 718 ~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~ 797 (1460)
... ...++.+++++||+.+.||+...++|+.++.+. |+ +.|+.+|.+ +..
T Consensus 213 ~~~----------------~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~----~~l~i~G~~-----~~~---- 262 (394)
T cd03794 213 KEL----------------GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PD----IRFLIVGDG-----PEK---- 262 (394)
T ss_pred hcc----------------CCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CC----eEEEEeCCc-----ccH----
Confidence 100 125678899999999999999999999998776 55 456655533 222
Q ss_pred HHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCC-----CccceeeeeeccCCCCceEEEc
Q psy775 798 EEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM-----NLVAKEFVACQINEPPGVLIVS 872 (1460)
Q Consensus 798 ~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGm-----nLva~EymAc~~~~~~g~lIlS 872 (1460)
+.+.+.+..- +... +.+.|.++++++..+|+.||+++.||..|++ +...+|||+| |.|+|+|
T Consensus 263 ~~~~~~~~~~-------~~~~-v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-----G~pvi~~ 329 (394)
T cd03794 263 EELKELAKAL-------GLDN-VTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA-----GKPVLAS 329 (394)
T ss_pred HHHHHHHHHc-------CCCc-EEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHC-----CCcEEEe
Confidence 2222222111 1122 4456799999999999999999999999976 4457999999 7899999
Q ss_pred CCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHH
Q psy775 873 PFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 952 (1460)
Q Consensus 873 e~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA 952 (1460)
..+|..+.+. ....++++++.|+++++
T Consensus 330 ~~~~~~~~~~-----------------------------------------------------~~~~g~~~~~~~~~~l~ 356 (394)
T cd03794 330 VDGESAELVE-----------------------------------------------------EAGAGLVVPPGDPEALA 356 (394)
T ss_pred cCCCchhhhc-----------------------------------------------------cCCcceEeCCCCHHHHH
Confidence 9998776111 01346889999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHH-hcCHHHHHHHH
Q psy775 953 EVIHRALTMPEDERTLRMNYLRKREK-VHDVNYWMRSF 989 (1460)
Q Consensus 953 ~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 989 (1460)
++|.++++.+....+.+.+. ++++. .++++.+++++
T Consensus 357 ~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 357 AAILELLDDPEERAEMGENG-RRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHhChHHHHHHHHHH-HHHHHHhhcHHHHHHhc
Confidence 99999997665544444444 55555 78888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-12 Score=148.75 Aligned_cols=173 Identities=21% Similarity=0.248 Sum_probs=128.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+++++||+.+.||+...++|+..+.+++|+ +.|+.+|...... + .... ++.+.+. .+
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~----~~l~i~G~~~~~~---~--~~~~---~~~~~~~-------~~ 246 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPN----VRLLLVGDGDEEN---P--AAIL---EIEKLGL-------EG 246 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCC----eEEEEEcCCCcch---h--hHHH---HHHhcCC-------cc
Confidence 4567899999999999999999999999887876 4666666554221 1 1111 1222221 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|. .+++..+|+.||+++.||.+||++++.+|||+| +.|+|+|..+|..+.+.
T Consensus 247 ~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~-----G~Pvi~s~~~~~~~~i~---------------- 303 (359)
T cd03808 247 RVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAM-----GRPVIATDVPGCREAVI---------------- 303 (359)
T ss_pred eEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHc-----CCCEEEecCCCchhhhh----------------
Confidence 3556666 678999999999999999999999999999999 78999999888766110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
....++++++.|+++++++|.+++..+...++...+.......
T Consensus 304 -------------------------------------~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 304 -------------------------------------DGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEE 346 (359)
T ss_pred -------------------------------------cCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 0134688999999999999999888766655555555444478
Q ss_pred hcCHHHHHHHHH
Q psy775 979 VHDVNYWMRSFL 990 (1460)
Q Consensus 979 ~~~~~~W~~~~l 990 (1460)
.++...++++++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 888888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-12 Score=146.16 Aligned_cols=166 Identities=20% Similarity=0.286 Sum_probs=120.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+++++||+.+.||+...++|+.++.+ |+ +.|+.+|...... ...... + ..+
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~----~~l~i~G~~~~~~-----~~~~~~-------~-------~~~ 243 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GD----IELVIVGNGLELE-----EESYEL-------E-------GDP 243 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHh--cC----cEEEEEcCchhhh-----HHHHhh-------c-------CCC
Confidence 456789999999999999999999999866 44 5677666543211 111111 1 123
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
.+.+.|.++.+++..+|+.||+++.||. .||++++++|||+| +.|+|+|+.+|..+.+.
T Consensus 244 ~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~e~i~--------------- 303 (359)
T cd03823 244 RVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAA-----GVPVIASDIGGMAELVR--------------- 303 (359)
T ss_pred eEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHC-----CCCEEECCCCCHHHHhc---------------
Confidence 4777899999999999999999999998 79999999999999 78999999888665111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
.-..+++++|.|+++++++|.++++.+...+..+.+ .++.+
T Consensus 304 --------------------------------------~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~-~~~~~ 344 (359)
T cd03823 304 --------------------------------------DGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAG-IEPPR 344 (359)
T ss_pred --------------------------------------CCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHh-HHHhh
Confidence 012468999999999999999999965544444433 34443
Q ss_pred HhcCHHHHHHHHHH
Q psy775 978 KVHDVNYWMRSFLK 991 (1460)
Q Consensus 978 ~~~~~~~W~~~~l~ 991 (1460)
.. ..+++++++
T Consensus 345 ~~---~~~~~~~~~ 355 (359)
T cd03823 345 SI---EDQAEEYLK 355 (359)
T ss_pred hH---HHHHHHHHH
Confidence 33 455555444
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-12 Score=149.38 Aligned_cols=157 Identities=24% Similarity=0.265 Sum_probs=119.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+++||+.+.||+...++|++++. ++.|+.+|.+. ...++.+++.+.+. .+
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~--------~~~l~i~G~g~---------~~~~~~~~~~~~~~-------~~ 244 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAALP--------DAPLVIVGEGP---------LEAELEALAAALGL-------LD 244 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhcc--------CcEEEEEeCCh---------hHHHHHHHHHhcCC-------cc
Confidence 45778999999999999999999998863 46677776432 22344444433332 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
-+.+.|.++++++..+|+.||++++||. .||+|++.+|||+| +.|+|+|+.+|..+.+.
T Consensus 245 ~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~-----g~Pvi~~~~~~~~~~i~-------------- 305 (357)
T cd03795 245 RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAF-----GKPVISTEIGTGGSYVN-------------- 305 (357)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHc-----CCCEEecCCCCchhHHh--------------
Confidence 4778899999999999999999999996 59999999999999 78999999888666110
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
. . -..+++++|.|+++++++|.++++++....+.+.++ +++
T Consensus 306 -------------------------------~--~-----~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~-~~~ 346 (357)
T cd03795 306 -------------------------------L--H-----GVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAA-RER 346 (357)
T ss_pred -------------------------------h--C-----CCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHH-HHH
Confidence 0 0 134688999999999999999999776655555544 444
Q ss_pred H
Q psy775 977 E 977 (1460)
Q Consensus 977 v 977 (1460)
+
T Consensus 347 ~ 347 (357)
T cd03795 347 A 347 (357)
T ss_pred H
Confidence 4
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.1e-14 Score=165.14 Aligned_cols=85 Identities=36% Similarity=0.605 Sum_probs=79.3
Q ss_pred CCC--CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH
Q psy775 1372 TTM--QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 1449 (1460)
Q Consensus 1372 ~~~--~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~ 1449 (1460)
.|+ +|++++.|+++++. ++++++++||||||||+||+++|+.|.++++++++|++|++.+ +|||||||+++++.
T Consensus 75 ~w~~~~p~a~~~~~~~~~~--~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~--~vaIvSGR~~~~l~ 150 (354)
T PLN02151 75 CWIKEHPSALNMFEEILHK--SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCF--PTAIVSGRCREKVS 150 (354)
T ss_pred HHHHhCChHHHHHHHHHHh--hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCC--CEEEEECCCHHHHH
Confidence 566 99999999999987 5678999999999999999999999999999999999999765 89999999999999
Q ss_pred HhcCCCCcccC
Q psy775 1450 EMVGIEGLTYA 1460 (1460)
Q Consensus 1450 ~~~~~~~~~ya 1460 (1460)
+++++++++||
T Consensus 151 ~~~~~~~l~la 161 (354)
T PLN02151 151 SFVKLTELYYA 161 (354)
T ss_pred HHcCCccceEE
Confidence 99999999886
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=157.22 Aligned_cols=162 Identities=12% Similarity=0.043 Sum_probs=111.5
Q ss_pred CCCEEEEEEcC-c-cccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDR-L-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdR-L-d~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.++++|++|+| + ++.||+..+++|+.++ .+ ++.|+.+|.+.... .
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~ivG~g~~~~-----------~--------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTFGKFSPFT-----------A--------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEEcCCCccc-----------c---------------
Confidence 45678999999 4 4789999999999874 23 35677777532110 0
Q ss_pred ccEEEEcCC-CCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhh
Q psy775 817 SPIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAA 895 (1460)
Q Consensus 817 ~pvv~~~g~-v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~ 895 (1460)
..+. +.|. .+.+++..+|+.||+||+||..|||++|++||||| +.|||+|..+|+.++
T Consensus 286 ~~v~-~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~-----G~PVVat~~gG~~Ei--------------- 344 (405)
T PRK10125 286 GNVV-NHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI-----GVPVIATHSDAAREV--------------- 344 (405)
T ss_pred cceE-EecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-----CCCEEEeCCCChHHh---------------
Confidence 0122 3343 36789999999999999999999999999999999 789999999997661
Q ss_pred hhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 896 AEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 896 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
|.+ .++++|+|.|++++|+++...+.... .+....+...+
T Consensus 345 ------------------------------v~~---------~~G~lv~~~d~~~La~~~~~~~~~~~-~~~~~~~~r~~ 384 (405)
T PRK10125 345 ------------------------------LQK---------SGGKTVSEEEVLQLAQLSKPEIAQAV-FGTTLAEFSQR 384 (405)
T ss_pred ------------------------------EeC---------CcEEEECCCCHHHHHhccCHHHHHHh-hhhHHHHHHHH
Confidence 111 24699999999999986533221100 00001222233
Q ss_pred HHHhcCHHHHHHHHHHHHh
Q psy775 976 REKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l~~l~ 994 (1460)
....++....+++.++-++
T Consensus 385 ~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 385 SRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 4566888888887776554
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=4e-12 Score=154.03 Aligned_cols=261 Identities=17% Similarity=0.132 Sum_probs=152.6
Q ss_pred CCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCC-CccccccCCCcHHHHhhhc-cCceeeeccHHhHHHHHHH
Q psy775 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFP-PWDIFRLFPWSDEILQGML-GCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 212 gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFP-s~eifr~LP~r~eil~gLL-~aDlIgF~t~~yar~FL~~ 289 (1460)
.|+|++|++.++ |.++.... ..++++.+..|.-.+ +...++.+ ..+.+.++ .+|.|-.++....+.+.+
T Consensus 125 Pd~v~~~~~~~~--~~~l~~~~---~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~~~l~~- 195 (425)
T PRK05749 125 PKLVIIMETELW--PNLIAELK---RRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDAERFLA- 195 (425)
T ss_pred CCEEEEEecchh--HHHHHHHH---HCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHHHHHHH-
Confidence 689999988865 55554321 124566665543222 22222222 12222222 379999999888877765
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecc-cCchhhhhhhccchhhhc---cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIA-IPYERFVQLAQAAPRVID---TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiG-ID~~~f~~~~~~~~~~~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
+|.. .. +.++|++ +|..............++ .++++++++++. .|+...+++||.+
T Consensus 196 ----~g~~-------------~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~~~ll~A~~~ 255 (425)
T PRK05749 196 ----LGAK-------------NE-VTVTGNLKFDIEVPPELAARAATLRRQLAPNRPVWIAASTH--EGEEELVLDAHRA 255 (425)
T ss_pred ----cCCC-------------CC-cEecccccccCCCChhhHHHHHHHHHHhcCCCcEEEEeCCC--chHHHHHHHHHHH
Confidence 2311 11 2344442 222211110000011111 467788999875 6889999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHH-HHHHHHHHHHHHHHhcc---cCCCCc----ccEEEEcCCCCHHHHHHHHHh
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEY-QDLKEEMDQLVGRINGR---FTTPNW----SPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey-~~L~~ev~~lv~~IN~~---fg~~~~----~pIv~~~g~v~~eeL~aLY~a 437 (1460)
+.+++|+++ |+++| ++++. .++++. +.+.+-. |.. +. ...+++.+ +..++..+|+.
T Consensus 256 l~~~~~~~~----liivG-----~g~~r~~~l~~~----~~~~gl~~~~~~~-~~~~~~~~~v~l~~--~~~el~~~y~~ 319 (425)
T PRK05749 256 LLKQFPNLL----LILVP-----RHPERFKEVEEL----LKKAGLSYVRRSQ-GEPPSADTDVLLGD--TMGELGLLYAI 319 (425)
T ss_pred HHHhCCCcE----EEEcC-----CChhhHHHHHHH----HHhCCCcEEEccC-CCCCCCCCcEEEEe--cHHHHHHHHHh
Confidence 998888753 44443 33332 344443 3332221 110 00 01233333 46799999999
Q ss_pred ccEEEE-ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch----hcc-cccEEECCCCHHHHHHHHHHHcCCCHHHHH
Q psy775 438 AAVALV-TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG----EQM-HEALICNPYEIDAAAEVIHRALTMPEDERT 511 (1460)
Q Consensus 438 ADV~Vv-pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa----~~L-~~allVNP~D~~elA~AI~~aL~m~~~er~ 511 (1460)
||++++ +|+.||+|++++||||| |.|+|++...|.. +.+ ..|.++.|.|++++|++|.+++++++..++
T Consensus 320 aDi~~v~~S~~e~~g~~~lEAma~-----G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~ 394 (425)
T PRK05749 320 ADIAFVGGSLVKRGGHNPLEPAAF-----GVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQA 394 (425)
T ss_pred CCEEEECCCcCCCCCCCHHHHHHh-----CCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHH
Confidence 999666 68889999999999999 6677887654433 333 347788899999999999999987655555
Q ss_pred HHHHHHHHHHhh
Q psy775 512 LRMNYLRKREKH 523 (1460)
Q Consensus 512 ~R~~~l~~~v~~ 523 (1460)
+..++ ++.+.+
T Consensus 395 m~~~a-~~~~~~ 405 (425)
T PRK05749 395 YGEAG-VAFLKQ 405 (425)
T ss_pred HHHHH-HHHHHh
Confidence 44433 444433
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.46 E-value=4e-12 Score=147.94 Aligned_cols=169 Identities=15% Similarity=0.107 Sum_probs=123.5
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
++.++++||+.+.||+...++|+.++.+ ++.|+.+|.+... . .+.+++.+ +.+. .+.+
T Consensus 193 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~--~---~~~~~~~~---~~~~-------~~~V 250 (363)
T cd04955 193 GRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN--T---PYGKLLKE---KAAA-------DPRI 250 (363)
T ss_pred CcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc--c---hHHHHHHH---HhCC-------CCcE
Confidence 4567899999999999999999987632 4567777765322 1 23333332 1111 2336
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCc-cCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlr-EGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.++++++..+|+.||++++||.. |||+++++|||+| +.|+|+|..+|..+++
T Consensus 251 ~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~-----G~PvI~s~~~~~~e~~------------------ 307 (363)
T cd04955 251 IFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAY-----GCPVLASDNPFNREVL------------------ 307 (363)
T ss_pred EEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHc-----CCCEEEecCCccceee------------------
Confidence 778999999999999999999999999 9999999999999 7899999988765511
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
+ .++.+++|.|. +|++|.++++++...++.+.+........
T Consensus 308 --------------------------------~-----~~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 348 (363)
T cd04955 308 --------------------------------G-----DKAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREK 348 (363)
T ss_pred --------------------------------c-----CCeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 1 13567777776 99999999998766555555543333445
Q ss_pred cCHHHHHHHHHHHH
Q psy775 980 HDVNYWMRSFLKGM 993 (1460)
Q Consensus 980 ~~~~~W~~~~l~~l 993 (1460)
++++.-++++++.+
T Consensus 349 fs~~~~~~~~~~~y 362 (363)
T cd04955 349 YTWEKIADQYEELY 362 (363)
T ss_pred CCHHHHHHHHHHHh
Confidence 78888777776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.1e-12 Score=142.48 Aligned_cols=217 Identities=18% Similarity=0.132 Sum_probs=141.0
Q ss_pred Cceeeccc-cccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHH
Q psy775 568 PLVWIHDY-HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 568 diIwIhDY-hL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
|+|++|++ .-.++.. +. ... ..++.+.+|-.++...... .+........+..+|.+-+.+....+.+.+..
T Consensus 83 dii~~~~~~~~~~~~~-~~----~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~- 154 (353)
T cd03811 83 DVVISHLTTTPNVLAL-LA----ARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL- 154 (353)
T ss_pred CEEEEcCccchhHHHH-HH----hhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHHhh-
Confidence 78999987 3222222 22 112 5678888887644322211 11112344455678888777766655544321
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.....++.++|+|+|.+.+...... .. ..+
T Consensus 155 ----------------~~~~~~~~vi~~~~~~~~~~~~~~~-------------------------~~---~~~------ 184 (353)
T cd03811 155 ----------------GIPPDKIEVIYNPIDIEEIRALAEE-------------------------PL---ELG------ 184 (353)
T ss_pred ----------------cCCccccEEecCCcChhhcCcccch-------------------------hh---hcC------
Confidence 1124567889999998765432110 00 000
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
...++.+++++||+.+.||+...++|+.++.+++|+. .|+.+|.+. .. .++.+++.+
T Consensus 185 ----------~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~----~l~i~G~~~-----~~----~~~~~~~~~ 241 (353)
T cd03811 185 ----------IPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDA----RLVILGDGP-----LR----EELEALAKE 241 (353)
T ss_pred ----------CCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCc----eEEEEcCCc-----cH----HHHHHHHHh
Confidence 1256788999999999999999999999998876664 566666432 11 233344444
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
.|.. +.+.+.|.. +++..+|+.||+++.||..||++++++|||+| +.|+|+|+.+|..+
T Consensus 242 ~~~~-------~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~-----G~PvI~~~~~~~~e 300 (353)
T cd03811 242 LGLA-------DRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMAL-----GTPVVATDCPGPRE 300 (353)
T ss_pred cCCC-------ccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHh-----CCCEEEcCCCChHH
Confidence 4322 336666664 46789999999999999999999999999999 78999999988766
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.4e-12 Score=154.17 Aligned_cols=262 Identities=19% Similarity=0.199 Sum_probs=180.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEec-----CCC-CccccccCCC---c----------HHHHhhhcc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHI-----PFP-PWDIFRLFPW---S----------DEILQGMLG 271 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHi-----PFP-s~eifr~LP~---r----------~eil~gLL~ 271 (1460)
.+|+|=+||||+-|+|.++++.. .....++..|..|- .|| ...-.-.||. . ..+--|+..
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~-~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ 208 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRY-RSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY 208 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcc-cccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence 48999999999999999999853 12457899999994 344 2233334442 1 334456777
Q ss_pred CceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc------------ch-----
Q psy775 272 CDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA------------AP----- 334 (1460)
Q Consensus 272 aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~------------~~----- 334 (1460)
||.|.--++.|+..-.. ...|... ...+.+ +.-++.-+=+|||.+...+.... ..
T Consensus 209 ad~vttVSptYa~Ei~t---~~~g~gl---~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 209 ADAVTTVSPTYAGEIYT---PEYGEGL---EGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred ccEEEEECHHHHHhhcc---ccccccc---hhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 78887777777765541 0111000 001111 22566667788886554321110 00
Q ss_pred hhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q psy775 335 RVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 407 (1460)
Q Consensus 335 ~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~I 407 (1460)
.+.. .+.+++..|+|++..||++.+++|+..++++. + .++.+|.+ + ..+...+..++.+.
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~----~~vilG~g---d----~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--W----QLVLLGTG---D----PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--c----eEEEEecC---c----HHHHHHHHHHHHhc
Confidence 1111 35689999999999999999999999999987 3 25555533 1 24566777777776
Q ss_pred hcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-----
Q psy775 408 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH----- 482 (1460)
Q Consensus 408 N~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~----- 482 (1460)
..++ .+.-..+..--..+|..||++++||..|++||+-++||.- |+++|+.+.+|.++.+.
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-----GtvpIv~~tGGLadTV~~~~~~ 413 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-----GTLPIVRETGGLADTVVDRNEW 413 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-----CCcceEcccCCccceecCccch
Confidence 6642 2222334444447899999999999999999999999987 78999999999998884
Q ss_pred -----c-cEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 483 -----E-ALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 483 -----~-allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
+ |+++.|.++++++.||.+|+..-..
T Consensus 414 ~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~ 445 (487)
T COG0297 414 LIQGVGTGFLFLQTNPDHLANALRRALVLYRA 445 (487)
T ss_pred hccCceeEEEEecCCHHHHHHHHHHHHHHhhC
Confidence 2 8899888999999999999875443
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.2e-12 Score=143.93 Aligned_cols=161 Identities=18% Similarity=0.179 Sum_probs=112.6
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+.+++++||+.+.||+...++|+.+ ++ +.|+.+|.+... + .+...+. +... ..+.+
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~li~~~~~-----~~----~~l~i~G~~~~~---~--~~~~~~~----~~~~------~~~~v 226 (335)
T cd03802 171 GDYLLFLGRISPEKGPHLAIRAARR-----AG----IPLKLAGPVSDP---D--YFYREIA----PELL------DGPDI 226 (335)
T ss_pred CCEEEEEEeeccccCHHHHHHHHHh-----cC----CeEEEEeCCCCH---H--HHHHHHH----Hhcc------cCCcE
Confidence 4578999999999999999998754 23 457767755311 1 1122222 1110 11237
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.++++++..+|+.||++++||. .||||++++||||| +.|+|+|..+|..+.+
T Consensus 227 ~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~-----G~PvI~~~~~~~~e~i------------------ 283 (335)
T cd03802 227 EYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMAC-----GTPVIAFRRGAVPEVV------------------ 283 (335)
T ss_pred EEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhc-----CCCEEEeCCCCchhhe------------------
Confidence 78899999999999999999999997 59999999999999 7899999999877611
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
.++ .+++++++ +++++++|.+++..+... .| .....+
T Consensus 284 ---------------------------~~~--------~~g~l~~~--~~~l~~~l~~l~~~~~~~--~~----~~~~~~ 320 (335)
T cd03802 284 ---------------------------EDG--------VTGFLVDS--VEELAAAVARADRLDRAA--CR----RRAERR 320 (335)
T ss_pred ---------------------------eCC--------CcEEEeCC--HHHHHHHHHHHhccHHHH--HH----HHHHHh
Confidence 111 24578887 999999999987654321 11 122355
Q ss_pred cCHHHHHHHHHH
Q psy775 980 HDVNYWMRSFLK 991 (1460)
Q Consensus 980 ~~~~~W~~~~l~ 991 (1460)
++++.-++++++
T Consensus 321 ~s~~~~~~~~~~ 332 (335)
T cd03802 321 FSAARMVDDYLA 332 (335)
T ss_pred CCHHHHHHHHHH
Confidence 676666666554
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.2e-13 Score=139.68 Aligned_cols=153 Identities=27% Similarity=0.467 Sum_probs=114.2
Q ss_pred CCCCEEEEEEcCccccCCHHHHHHHHHHHHHh-CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 738 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 738 ~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~-~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
..++++|+++||+++.||+...++||..+.++ .|+ +.|+.+|.. .....+...+...+..
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~~---------~~~~~~~~~~~~~~~~------ 72 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGDG---------EYKKELKNLIEKLNLK------ 72 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESHC---------CHHHHHHHHHHHTTCG------
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEccc---------cccccccccccccccc------
Confidence 36789999999999999999999999999875 665 456666611 1233444444444432
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
.-+.+.+.++.+++.++|+.||+++.||..||+|++.+|||+| +.|+|+|..+|..+.+.
T Consensus 73 -~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-----g~pvI~~~~~~~~e~~~-------------- 132 (172)
T PF00534_consen 73 -ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-----GCPVIASDIGGNNEIIN-------------- 132 (172)
T ss_dssp -TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-----T-EEEEESSTHHHHHSG--------------
T ss_pred -ccccccccccccccccccccceecccccccccccccccccccc-----ccceeeccccCCceeec--------------
Confidence 1155567888999999999999999999999999999999999 78999999777665111
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTL 968 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~ 968 (1460)
.-..+++++|.|+++++++|.+++.++.....+
T Consensus 133 ---------------------------------------~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l 165 (172)
T PF00534_consen 133 ---------------------------------------DGVNGFLFDPNDIEELADAIEKLLNDPELRQKL 165 (172)
T ss_dssp ---------------------------------------TTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cccceEEeCCCCHHHHHHHHHHHHCCHHHHHHH
Confidence 012468999999999999999999877433333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-12 Score=152.34 Aligned_cols=155 Identities=19% Similarity=0.242 Sum_probs=113.6
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+++++++||+.+.||++..++||+++ | + .|+.+|.+ ++. +++++ .. .+-+
T Consensus 195 ~~~il~~G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~g-----~~~----~~l~~---~~---------~~~V 244 (351)
T cd03804 195 EDYYLSVGRLVPYKRIDLAIEAFNKL----G-K----RLVVIGDG-----PEL----DRLRA---KA---------GPNV 244 (351)
T ss_pred CCEEEEEEcCccccChHHHHHHHHHC----C-C----cEEEEECC-----hhH----HHHHh---hc---------CCCE
Confidence 34688999999999999999999764 3 2 35555643 222 22222 11 1236
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
.+.|.++.+|+.++|+.||++++||. ||||++++||||| +.|+|+|..+|..+.
T Consensus 245 ~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-----G~Pvi~~~~~~~~e~-------------------- 298 (351)
T cd03804 245 TFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-----GTPVIAYGKGGALET-------------------- 298 (351)
T ss_pred EEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-----CCCEEEeCCCCCcce--------------------
Confidence 77899999999999999999999999 9999999999999 789999998886651
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
|.++ ..+++++|.|++++|++|..+++++... .+.+.+....+
T Consensus 299 -------------------------i~~~--------~~G~~~~~~~~~~la~~i~~l~~~~~~~----~~~~~~~~~~~ 341 (351)
T cd03804 299 -------------------------VIDG--------VTGILFEEQTVESLAAAVERFEKNEDFD----PQAIRAHAERF 341 (351)
T ss_pred -------------------------eeCC--------CCEEEeCCCCHHHHHHHHHHHHhCcccC----HHHHHHHHHhc
Confidence 1111 3468999999999999999999887411 12234444556
Q ss_pred CHHHHHHH
Q psy775 981 DVNYWMRS 988 (1460)
Q Consensus 981 ~~~~W~~~ 988 (1460)
+..+..++
T Consensus 342 ~~~~~~~~ 349 (351)
T cd03804 342 SESRFREK 349 (351)
T ss_pred CHHHHHHH
Confidence 66555544
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.1e-12 Score=146.92 Aligned_cols=171 Identities=19% Similarity=0.222 Sum_probs=124.8
Q ss_pred CCCEEEEEEcCccc--cCCHHHHHHHHHHHHHh-CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDY--TKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~--~KGi~~kL~Afe~fL~~-~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++++.+++... .||+...++|++.+.++ +| ++.++.+|..... .+. ..
T Consensus 189 ~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~~~~i~G~~~~~---------~~~-----~~-------- 242 (365)
T cd03825 189 ADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DIELVVFGASDPE---------IPP-----DL-------- 242 (365)
T ss_pred CCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----CeEEEEeCCCchh---------hhc-----cC--------
Confidence 45667776666654 99999999999987665 34 4566666644211 000 11
Q ss_pred CccEEEEcCCCC-HHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchh
Q psy775 816 WSPIRYIYGCIS-QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 816 ~~pvv~~~g~v~-~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
...+.+.|.++ .+++..+|+.||+++.||..||||++.+|||+| +.|+|+|..+|..+.+
T Consensus 243 -~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~-----g~PvI~~~~~~~~e~~------------- 303 (365)
T cd03825 243 -PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALAC-----GTPVVAFDVGGIPDIV------------- 303 (365)
T ss_pred -CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhc-----CCCEEEecCCCChhhe-------------
Confidence 12266778888 889999999999999999999999999999999 7899999988766611
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
..+ ..++++++.|++++|++|.++++.+...++...+. +
T Consensus 304 --------------------------------~~~--------~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~-~ 342 (365)
T cd03825 304 --------------------------------DHG--------VTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAA-R 342 (365)
T ss_pred --------------------------------eCC--------CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-H
Confidence 111 24588999999999999999998665444444443 4
Q ss_pred hHH-HhcCHHHHHHHHHHHHhh
Q psy775 975 KRE-KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 975 ~~v-~~~~~~~W~~~~l~~l~~ 995 (1460)
+++ ..++++.+++++++-+++
T Consensus 343 ~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 343 ELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHhcCHHHHHHHHHHHHhh
Confidence 444 567888888888776543
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-12 Score=157.89 Aligned_cols=173 Identities=10% Similarity=0.107 Sum_probs=122.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC--CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH--LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~--~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.+..+++++||+.+.||+..+++|++.+.+..++. ..++.|+.+|.+. .++++++++++.+ .
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~---------~~~~l~~~~~~~~-------l 293 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP---------LKEKYLERIKELK-------L 293 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc---------cHHHHHHHHHHcC-------C
Confidence 34578889999999999999999999987632110 1136777777542 2345555555432 2
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEEC---CCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVT---PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvt---SlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
..++++.|.++.+++..+|++||+++.+ +..+||+++.+||||| +.|+|+|..+|..+++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-----G~PVI~s~~~~~~eiv------------ 356 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-----GLPVCALDFKCIDELV------------ 356 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-----CCCEEEeCCCCHHHHh------------
Confidence 3568888899999999999999999874 3358899999999999 7899999988866611
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMP--EDERTLRMN 971 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~--~~er~~r~~ 971 (1460)
.++ ..+++++ |++++|++|..+++++ +++++...+
T Consensus 357 ---------------------------------~~~--------~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~ 393 (415)
T cd03816 357 ---------------------------------KHG--------ENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKK 393 (415)
T ss_pred ---------------------------------cCC--------CCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 111 2357774 9999999999999982 444444344
Q ss_pred HHHhHHHhcCHHHHHH
Q psy775 972 YLRKREKVHDVNYWMR 987 (1460)
Q Consensus 972 ~~~~~v~~~~~~~W~~ 987 (1460)
..+++........|.+
T Consensus 394 ~~~~~~~~~~~~~~~~ 409 (415)
T cd03816 394 GAQEESELRWDENWDR 409 (415)
T ss_pred HHHHhhhcCHHHHHHH
Confidence 4455555444445543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.2e-13 Score=155.97 Aligned_cols=107 Identities=32% Similarity=0.549 Sum_probs=86.2
Q ss_pred hhcCchhhhhhcccCCCcCCCCCCCCCCCC--CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhH
Q psy775 1345 EYLSKNELLILKGMGTLITEDGDDVLPTTM--QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEET 1422 (1460)
Q Consensus 1345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~ 1422 (1460)
.--|+.++|..++ ..+. ++....|+ +|++++.|+++++. ++.+++++||||||||+||+++|+.+.+++++
T Consensus 66 ~~~~~~~~~~~~~---~~~~--~~~~~~w~~~~psal~~~~~~~~~--~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~ 138 (366)
T PLN03017 66 RASSPTHLKSLPS---SISS--QQQLNSWIMQHPSALEMFEQIMEA--SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKM 138 (366)
T ss_pred hccCCCccccccc---cccc--hhhhhHHHhhCChHHHHHHHHHHH--hcCCCeEEEEecCCcCcCCcCCcccccCCHHH
Confidence 3345566555444 1111 12223565 99999999999887 46789999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1423 KRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1423 ~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
+++|++|++. ++|||+|||++.++.+++++.+++|+
T Consensus 139 ~~aL~~La~~--~~vaIvSGR~~~~l~~~~~l~~l~l~ 174 (366)
T PLN03017 139 RRTVKKLAKC--FPTAIVTGRCIDKVYNFVKLAELYYA 174 (366)
T ss_pred HHHHHHHhcC--CcEEEEeCCCHHHHHHhhcccCceEE
Confidence 9999999965 58999999999999999999877764
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-11 Score=147.44 Aligned_cols=167 Identities=16% Similarity=0.206 Sum_probs=118.1
Q ss_pred CCCEEEEEEcCccccCCHHHHH----HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL----KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL----~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~ 814 (1460)
.++++|+++||+++.||+...+ .++.++.+++|++ .|+.+|.+. . .+++++ ...
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~----~l~ivG~g~-----~-----~~~~~l----~~~---- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAA----EFYIVGAKP-----S-----PAVRAL----AAL---- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCc----EEEEECCCC-----h-----HHHHHh----ccC----
Confidence 3567899999999999999887 5676777788875 566666432 1 122222 111
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 815 NWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
+-+.+.|.++ ++..+|+.||++|+||. .||++++.+||||| +.|+|+|..++..-
T Consensus 280 ---~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~-----G~PVV~t~~~~~~i-------------- 335 (397)
T TIGR03087 280 ---PGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAM-----AKPVVASPEAAEGI-------------- 335 (397)
T ss_pred ---CCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHc-----CCCEEecCcccccc--------------
Confidence 1156778887 67899999999999996 59999999999999 78899988642110
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+ +-. ..++++. .|++++|++|.+.++++...++++.++
T Consensus 336 --------------------------------~--~~~------~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~a- 373 (397)
T TIGR03087 336 --------------------------------D--ALP------GAELLVA-ADPADFAAAILALLANPAEREELGQAA- 373 (397)
T ss_pred --------------------------------c--ccC------CcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 0 000 1246675 899999999999998765444444444
Q ss_pred HhHH-HhcCHHHHHHHHHHHH
Q psy775 974 RKRE-KVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 974 ~~~v-~~~~~~~W~~~~l~~l 993 (1460)
++++ ..+++...++++.+-+
T Consensus 374 r~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 374 RRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 5555 6789888888776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-12 Score=155.33 Aligned_cols=97 Identities=38% Similarity=0.684 Sum_probs=85.3
Q ss_pred cccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 15 ILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
...|++.+..|+++..- +.++++++||||||||+||+.+|+.+.++++++++|++|++. ..|+|+|||+.+++.++
T Consensus 98 ~~~~p~al~~~~~~~~~--~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~ 173 (384)
T PLN02580 98 MLKYPSALTSFEQIANF--AKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYEL 173 (384)
T ss_pred HHhCcHHHHHHHHHHHH--hhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHH
Confidence 45678888888776533 446889999999999999999999999999999999999998 47999999999999999
Q ss_pred hccccceeEccCCcccccCCC
Q psy775 95 VGIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 95 l~~~~~~~ig~hGaei~~~g~ 115 (1460)
+++.++.|+|+||+++..+.+
T Consensus 174 l~~~~l~laGsHG~e~~~p~~ 194 (384)
T PLN02580 174 VGLTELYYAGSHGMDIMGPVR 194 (384)
T ss_pred hCCCCccEEEeCCceeecCCC
Confidence 998889999999999876543
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-11 Score=153.87 Aligned_cols=160 Identities=10% Similarity=0.035 Sum_probs=112.3
Q ss_pred EEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q psy775 742 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 821 (1460)
Q Consensus 742 kiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~ 821 (1460)
+.+++||||.+.||+..+|+|+..+.++.|++ .|+.+|.+ + .++++++++.+.+.. +.
T Consensus 547 kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv----rLvIVGDG-----P----~reeLe~la~eLgL~---------V~ 604 (794)
T PLN02501 547 KGAYFLGKMVWAKGYRELIDLLAKHKNELDGF----NLDVFGNG-----E----DAHEVQRAAKRLDLN---------LN 604 (794)
T ss_pred CceEEEEcccccCCHHHHHHHHHHHHhhCCCe----EEEEEcCC-----c----cHHHHHHHHHHcCCE---------EE
Confidence 44789999999999999999999988888864 56666644 3 234555555554321 34
Q ss_pred EcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhc
Q psy775 822 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFC 901 (1460)
Q Consensus 822 ~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~ 901 (1460)
|.|..+. ...+|+.|||||+||.+|||++|++||||| +.|||+|..+|...
T Consensus 605 FLG~~dd--~~~lyasaDVFVlPS~sEgFGlVlLEAMA~-----GlPVVATd~pG~e~---------------------- 655 (794)
T PLN02501 605 FLKGRDH--ADDSLHGYKVFINPSISDVLCTATAEALAM-----GKFVVCADHPSNEF---------------------- 655 (794)
T ss_pred ecCCCCC--HHHHHHhCCEEEECCCcccchHHHHHHHHc-----CCCEEEecCCCCce----------------------
Confidence 5555443 347899999999999999999999999999 78999999876221
Q ss_pred cccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcC
Q psy775 902 PYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHD 981 (1460)
Q Consensus 902 ~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 981 (1460)
+.++ .++++ +.|.++++++|.++|++++.. .+... ...++
T Consensus 656 -------------------------V~~g-------~nGll--~~D~EafAeAI~~LLsd~~~r--l~~~a----~~~~S 695 (794)
T PLN02501 656 -------------------------FRSF-------PNCLT--YKTSEDFVAKVKEALANEPQP--LTPEQ----RYNLS 695 (794)
T ss_pred -------------------------Eeec-------CCeEe--cCCHHHHHHHHHHHHhCchhh--hHHHH----HhhCC
Confidence 1111 12333 369999999999999987632 11111 22566
Q ss_pred HHHHHHHHHHH
Q psy775 982 VNYWMRSFLKG 992 (1460)
Q Consensus 982 ~~~W~~~~l~~ 992 (1460)
+..-++++++.
T Consensus 696 WeAaadrLle~ 706 (794)
T PLN02501 696 WEAATQRFMEY 706 (794)
T ss_pred HHHHHHHHHHh
Confidence 66666666544
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-12 Score=150.51 Aligned_cols=95 Identities=37% Similarity=0.645 Sum_probs=84.3
Q ss_pred ccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 16 LKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..|++.+..+++++.. ..++++++||||||||+||+++|+.+.++++++++|++|++. ..|+|+|||+...+.+.+
T Consensus 78 ~~~p~a~~~~~~~~~~--~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 78 KEHPSALNMFEEILHK--SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--FPTAIVSGRCREKVSSFV 153 (354)
T ss_pred HhCChHHHHHHHHHHh--hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC--CCEEEEECCCHHHHHHHc
Confidence 4677888888877776 334689999999999999999999999999999999999965 689999999999999999
Q ss_pred ccccceeEccCCcccccCC
Q psy775 96 GIEGLTYAGNHGLEIIHPD 114 (1460)
Q Consensus 96 ~~~~~~~ig~hGaei~~~g 114 (1460)
++.++.|+|+||+++..++
T Consensus 154 ~~~~l~laGsHG~e~~~p~ 172 (354)
T PLN02151 154 KLTELYYAGSHGMDIKGPE 172 (354)
T ss_pred CCccceEEEeCCceeecCC
Confidence 9888999999999987653
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-10 Score=138.86 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=146.4
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCc-HHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWS-DEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r-~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
++.++|.+..-...+...++ ..++.+-+|=-|+..... -+.. ...-..+-.||+|-..+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~~~--------~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAALLQ--------ASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhhcC--------CCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-
Confidence 57789988665555555522 345555555333321110 0000 11122233467776666554432211
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc---hhhhccCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA---PRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~---~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
+ + .++.++|+|+|.+.|.+..... ......++++++|+|++.+.+++. +|.+ +
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~-ll~~---l 226 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE-LLEA---L 226 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH-HHHH---H
Confidence 1 2 4577899999999997543221 112225678999999999966654 4443 3
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
.+.+|++. ++.+|... ...+ . ..+ .. ...| .+.|.++.+++.++|+.||++++|+.
T Consensus 227 a~~~p~~~----~vliG~~~--~~~~---~----~~~----~~------~~nV-~~~G~~~~~~l~~~l~~~Dv~l~P~~ 282 (373)
T cd04950 227 AKARPDWS----FVLIGPVD--VSID---P----SAL----LR------LPNV-HYLGPKPYKELPAYLAGFDVAILPFR 282 (373)
T ss_pred HHHCCCCE----EEEECCCc--CccC---h----hHh----cc------CCCE-EEeCCCCHHHHHHHHHhCCEEecCCc
Confidence 45678763 55556331 1000 0 111 00 1234 45699999999999999999999986
Q ss_pred C-----CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 447 R-----DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 447 r-----EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
. +++++..+||||| |.|+|.|...++.+ ..++..+.+.|+++++++|.++|..+..++..+. .+..
T Consensus 283 ~~~~~~~~~P~Kl~EylA~-----G~PVVat~~~~~~~-~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~ 353 (373)
T cd04950 283 LNELTRATSPLKLFEYLAA-----GKPVVATPLPEVRR-YEDEVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLA 353 (373)
T ss_pred cchhhhcCCcchHHHHhcc-----CCCEEecCcHHHHh-hcCcEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHH
Confidence 3 4778999999999 56668777654433 3334555567999999999998765544433222 2256
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 354 ~~~s 357 (373)
T cd04950 354 AQNS 357 (373)
T ss_pred HHCC
Confidence 6666
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.2e-12 Score=142.55 Aligned_cols=176 Identities=20% Similarity=0.307 Sum_probs=131.3
Q ss_pred CCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q psy775 301 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL 380 (1460)
Q Consensus 301 ~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLv 380 (1460)
.+..++-.-..-++.++|+.++++.|.+.+...+ ..+...|+.++||-+.||++.+++.+.++.++||+.+ ++
T Consensus 158 entvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~---S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 158 ENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKP---SADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CceEEEeccCHhHeeeccceeeccccccCccccC---CCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 3444444445568999999999999988543310 1345789999999999999999999999999999864 55
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeee
Q psy775 381 QIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460 (1460)
Q Consensus 381 qig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAc 460 (1460)
.+| |+|....+++-+++. +-+ .+++ +.|.++++++-..|...|||+-||+.|.||++.+||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l~------~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FLQ------DRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hcc------CceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 554 444333344333332 111 2444 459999999999999999999999999999999999999
Q ss_pred ccCCCCCeEEEcCCCCchhccccc-EEECCCCHHHHHHHHHHHcC
Q psy775 461 QINEPPGVLIVSPFAGAGEQMHEA-LICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 461 q~~~~~GvlVlSe~aGaa~~L~~a-llVNP~D~~elA~AI~~aL~ 504 (1460)
|-++|.+..+|..+.|... +..-+-+++++++++.++++
T Consensus 295 -----GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 295 -----GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred -----CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 4556777777777777654 43455578888888888876
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.9e-12 Score=146.88 Aligned_cols=97 Identities=35% Similarity=0.640 Sum_probs=83.8
Q ss_pred cccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 15 ILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
+..|++.+..|++++..+. .+++++||||||||+||+.+|+.+.++++++++|++|+ + ++.++|+|||++..+.+.
T Consensus 90 ~~~~psal~~~~~~~~~~~--~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~-~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 90 IMQHPSALEMFEQIMEASR--GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K-CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HhhCChHHHHHHHHHHHhc--CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c-CCcEEEEeCCCHHHHHHh
Confidence 3457888888877776533 47899999999999999999999999999999999999 4 689999999999999988
Q ss_pred hccccceeEccCCcccccCCC
Q psy775 95 VGIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 95 l~~~~~~~ig~hGaei~~~g~ 115 (1460)
.++..+.++|+||+++..+++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~ 186 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAK 186 (366)
T ss_pred hcccCceEEEcCCcEEecCCC
Confidence 877777899999999887653
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.4e-11 Score=143.61 Aligned_cols=164 Identities=13% Similarity=0.083 Sum_probs=116.9
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
.+++++||||.+.||+..+|+||.++.+++|++ .|+.+|.+ ++. +++++++.+++- . ++
T Consensus 228 ~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivGdG-----p~~----~~L~~~a~~l~l-------~-~~ 286 (462)
T PLN02846 228 TKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYGSG-----EDS----DEVKAAAEKLEL-------D-VR 286 (462)
T ss_pred ceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEECCC-----ccH----HHHHHHHHhcCC-------c-EE
Confidence 357899999999999999999999988888874 45555543 333 445555555432 1 34
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
+|.|..+.+ .+|+.+||||.||.+||||+|.+||||| +.|+|++...| .+.
T Consensus 287 vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-----G~PVVa~~~~~-~~~-------------------- 337 (462)
T PLN02846 287 VYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAM-----GKIVVCANHPS-NEF-------------------- 337 (462)
T ss_pred EECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHc-----CCcEEEecCCC-cce--------------------
Confidence 577766554 5888999999999999999999999999 78899998775 341
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
|.+. .+++.+ .|.++++++|.++|+.++.+... .. + ..+
T Consensus 338 -------------------------v~~~--------~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~--~a-~---~~~ 376 (462)
T PLN02846 338 -------------------------FKQF--------PNCRTY--DDGKGFVRATLKALAEEPAPLTD--AQ-R---HEL 376 (462)
T ss_pred -------------------------eecC--------CceEec--CCHHHHHHHHHHHHccCchhHHH--HH-H---HhC
Confidence 1111 234555 38999999999999865433211 11 1 367
Q ss_pred CHHHHHHHHHHHHhh
Q psy775 981 DVNYWMRSFLKGMGT 995 (1460)
Q Consensus 981 ~~~~W~~~~l~~l~~ 995 (1460)
+++.-++++++.++-
T Consensus 377 SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 377 SWEAATERFLRVADL 391 (462)
T ss_pred CHHHHHHHHHHHhcc
Confidence 777777777766543
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-11 Score=141.01 Aligned_cols=101 Identities=34% Similarity=0.583 Sum_probs=86.9
Q ss_pred HHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccC
Q psy775 27 EYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNH 106 (1460)
Q Consensus 27 ~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~h 106 (1460)
..+..+.. +++.++||||||||+++..+|+.+.+++.++++|++|++++...|+|+|||++.++..+++.++++++|.|
T Consensus 8 ~~~~~~~~-a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aeh 86 (266)
T COG1877 8 QLLEPYLN-ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEH 86 (266)
T ss_pred hhcccccc-ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEec
Confidence 44444444 56789999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CcccccCCCCccccCCCccchh
Q psy775 107 GLEIIHPDGSRFVHPIPTEFED 128 (1460)
Q Consensus 107 Gaei~~~g~~i~~~pI~ee~vd 128 (1460)
|++++..++..|...-.++...
T Consensus 87 Ga~~r~~~g~~~~~~~~~~~~~ 108 (266)
T COG1877 87 GAEVRDPNGKWWINLAEEADLR 108 (266)
T ss_pred ceEEecCCCCeeEecCHHHHhh
Confidence 9999777776666555555544
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-11 Score=145.26 Aligned_cols=115 Identities=10% Similarity=0.132 Sum_probs=88.8
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHH-----------------hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHH
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLE-----------------KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 802 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~-----------------~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~ 802 (1460)
...+++++||+.+.||+...++|+..+.. ++|+ +.|+.+|.+. + ++++++
T Consensus 212 ~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~G~-----~----~~~l~~ 278 (371)
T PLN02275 212 RPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGKGP-----Q----KAMYEE 278 (371)
T ss_pred CcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeCCC-----C----HHHHHH
Confidence 34678899999999999999999988752 3454 6778777543 2 244555
Q ss_pred HHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECC---CccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 803 LVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP---LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 803 lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtS---lrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
.+++.+. ..++++.+.++.+++..+|+.||++|+++ ..|||+.+.+||||| +.|+|+|..+|..+
T Consensus 279 ~~~~~~l-------~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-----G~PVVa~~~gg~~e 346 (371)
T PLN02275 279 KISRLNL-------RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-----GLPVCAVSYSCIGE 346 (371)
T ss_pred HHHHcCC-------CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-----CCCEEEecCCChHH
Confidence 5554332 24677777899999999999999999853 348999999999999 78999999888666
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-09 Score=132.82 Aligned_cols=182 Identities=15% Similarity=0.078 Sum_probs=115.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhcc---CCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGR---FTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~---~~~~~ 815 (1460)
.++++++++++. .|+...+++||.++.+++|++ .|+.+|. +++. .+++++++++.+-. +.. +
T Consensus 231 ~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~----~liivG~-----g~~r---~~~l~~~~~~~gl~~~~~~~-~ 295 (425)
T PRK05749 231 PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNL----LLILVPR-----HPER---FKEVEELLKKAGLSYVRRSQ-G 295 (425)
T ss_pred CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCc----EEEEcCC-----Chhh---HHHHHHHHHhCCCcEEEccC-C
Confidence 356788888874 588999999999999889975 4554442 2222 13455554443322 110 0
Q ss_pred Cc----cEEEEcCCCCHHHHHHHHHHccEEEE-CCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 816 WS----PIRYIYGCISQDELASFYRDAAVALV-TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 816 ~~----pvv~~~g~v~~eel~Aly~~ADv~vv-tSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
.. ..+++.+ +..|+..+|+.||++++ +|..||+|++++||||| +.|+|++...|...
T Consensus 296 ~~~~~~~~v~l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-----G~PVI~g~~~~~~~----------- 357 (425)
T PRK05749 296 EPPSADTDVLLGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-----GVPVISGPHTFNFK----------- 357 (425)
T ss_pred CCCCCCCcEEEEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-----CCCEEECCCccCHH-----------
Confidence 00 1233332 46799999999999766 67889999999999999 78889887654322
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
++++.+ ..++.++.|.|++++|++|.+.++.+...+++..
T Consensus 358 ---e~~~~~-------------------------------------~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~ 397 (425)
T PRK05749 358 ---EIFERL-------------------------------------LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGE 397 (425)
T ss_pred ---HHHHHH-------------------------------------HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 011100 0223567789999999999999986554444443
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 971 NYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 971 ~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
..++++.++. .=.+..++.+...
T Consensus 398 -~a~~~~~~~~--~~~~~~~~~l~~~ 420 (425)
T PRK05749 398 -AGVAFLKQNQ--GALQRTLQLLEPY 420 (425)
T ss_pred -HHHHHHHhCc--cHHHHHHHHHHHh
Confidence 4466666552 3334444444443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.4e-10 Score=124.00 Aligned_cols=171 Identities=25% Similarity=0.368 Sum_probs=125.8
Q ss_pred EEEEeecccCchhhhhhhccchhhhccC-CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~-~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ 391 (1460)
++.++|.|++.+.+.... ....... ..+++++||+.+.||+...++|+..+.+..++ +.++.+|.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~g~~~~~--- 242 (381)
T COG0438 173 KIVVIPNGIDTEKFAPAR---IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGPER--- 242 (381)
T ss_pred CceEecCCcCHHHcCccc---cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEEcCCCcc---
Confidence 667889999998876420 0111112 36899999999999999999999999887765 345555533221
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
...+.. ++.+.+. .+.+.+.|.++.+++..+|+.||+++.||..||||++++|||+| |.|+|+
T Consensus 243 -~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~-----g~pvi~ 305 (381)
T COG0438 243 -REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA-----GTPVIA 305 (381)
T ss_pred -HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-----CCcEEE
Confidence 112222 3333322 12344478899889999999999999999999999999999999 567799
Q ss_pred cCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHH
Q psy775 472 SPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDER 510 (1460)
Q Consensus 472 Se~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er 510 (1460)
|...|..+.+.+ |.++++.|.+++++++..++++....+
T Consensus 306 ~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 347 (381)
T COG0438 306 SDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELRE 347 (381)
T ss_pred CCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHHHH
Confidence 999888877754 778888889999999999999873333
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-09 Score=127.23 Aligned_cols=187 Identities=12% Similarity=0.076 Sum_probs=116.3
Q ss_pred cCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEE
Q psy775 271 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVL 345 (1460)
Q Consensus 271 ~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL 345 (1460)
.+|.+-.-+......+.+ .| -...+|.+++++|+++.+.+.. .....++ .++++|+
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g-------------~~~~ki~v~g~~v~~~f~~~~~-~~~~~r~~~gl~~~~~~il 210 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RG-------------LEPSQIRVYGLPIRPSFARAVR-PKDELRRELGMDEDLPAVL 210 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cC-------------CCHHHEEEECcccCHhhccCCC-CHHHHHHHcCCCCCCcEEE
Confidence 478887766554444332 12 1223556678888876543221 1112221 5678999
Q ss_pred EecCccccCCHHHHHHHHHHHHHh----CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEK----HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 421 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~----~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~ 421 (1460)
++||....||+..+++++..++.+ .|+. .++.++. +.+ .+++++++... + ..| .
T Consensus 211 ~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~----~~~vi~G----~~~---~~~~~L~~~~~--~--------~~v-~ 268 (382)
T PLN02605 211 LMGGGEGMGPLEETARALGDSLYDKNLGKPIG----QVVVICG----RNK---KLQSKLESRDW--K--------IPV-K 268 (382)
T ss_pred EECCCcccccHHHHHHHHHHhhccccccCCCc----eEEEEEC----CCH---HHHHHHHhhcc--c--------CCe-E
Confidence 999999999999999999876522 2332 2333331 112 22333332210 1 123 3
Q ss_pred EcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC-----CCchhcc-cccEEECCCCHHHH
Q psy775 422 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-----AGAGEQM-HEALICNPYEIDAA 495 (1460)
Q Consensus 422 ~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~-----aGaa~~L-~~allVNP~D~~el 495 (1460)
+.|+++ ++..+|++||++|.+| .++++.||||| +.|+|++.. .|.++.+ .++.-+.+.|++++
T Consensus 269 ~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~-----g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~l 337 (382)
T PLN02605 269 VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIR-----GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEI 337 (382)
T ss_pred EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHc-----CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHH
Confidence 558774 7999999999999866 37899999999 667788875 2333434 23333446899999
Q ss_pred HHHHHHHcCCCHHH
Q psy775 496 AEVIHRALTMPEDE 509 (1460)
Q Consensus 496 A~AI~~aL~m~~~e 509 (1460)
+++|.++|.+++++
T Consensus 338 a~~i~~ll~~~~~~ 351 (382)
T PLN02605 338 ARIVAEWFGDKSDE 351 (382)
T ss_pred HHHHHHHHcCCHHH
Confidence 99999999974333
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-11 Score=137.24 Aligned_cols=85 Identities=42% Similarity=0.686 Sum_probs=59.2
Q ss_pred EEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCccccC
Q psy775 42 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHP 121 (1460)
Q Consensus 42 FfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i~~~p 121 (1460)
||||||||+|+.++|+.+.++++++++|++|++.++..|+|+|||+.+++..+..+.+++++|+||+++..+++..+...
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~ 80 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL 80 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc
Confidence 89999999999999999999999999999999998888999999999997778788999999999999999988655443
Q ss_pred CCccc
Q psy775 122 IPTEF 126 (1460)
Q Consensus 122 I~ee~ 126 (1460)
.....
T Consensus 81 ~~~~~ 85 (235)
T PF02358_consen 81 PADED 85 (235)
T ss_dssp TGGGG
T ss_pred ccccc
Confidence 33433
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.5e-11 Score=135.23 Aligned_cols=93 Identities=32% Similarity=0.516 Sum_probs=78.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCc
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSR 117 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i 117 (1460)
++++||||||||++++++|+.+.+++.++++|++|++++|+.++|+|||++..+.+.+...++.++|+||+++...++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 68999999999999999999999999999999999985599999999999999988886555678999999998665544
Q ss_pred cccCCCccchhhh
Q psy775 118 FVHPIPTEFEDKV 130 (1460)
Q Consensus 118 ~~~pI~ee~vdeL 130 (1460)
+...++.+....+
T Consensus 94 ~~~~l~~~~~~~i 106 (266)
T PRK10187 94 HIVHLPDAIARDI 106 (266)
T ss_pred eeccCChhHHHHH
Confidence 4566766554443
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.4e-09 Score=131.30 Aligned_cols=323 Identities=16% Similarity=0.166 Sum_probs=193.2
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeC-----CCC-CccccccCcc-H------------HHHHhhcccC
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHI-----PFP-PWDIFRLFPW-S------------DEILQGMLGC 627 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHi-----PfP-~~e~fr~lP~-r------------~eIL~~LL~a 627 (1460)
+|+|-+||||.-|+|.++++.. ......+-.|..|. .|+ .......+|. . .-+=-++..|
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~-~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRY-RSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcc-cccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 4899999999999999998432 22567788999995 233 1111122332 1 1222345556
Q ss_pred ceeecccHhHHHHHHHHHHHHhCceeeCC-CcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccc
Q psy775 628 DMVGFHIEDYCLNFVDCCQRRLGCRVDRK-NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLD 706 (1460)
Q Consensus 628 DlIGFqt~~yar~FL~~c~rlLg~~~~~~-~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~ 706 (1460)
|.|.--.+.|++--.. . .+..+ ...+.+ +.-++.-+=+|||.+...+.....-. .. ....+
T Consensus 210 d~vttVSptYa~Ei~t---~----~~g~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~-~~--------y~~~~ 271 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---P----EYGEGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIA-AN--------YSAEV 271 (487)
T ss_pred cEEEEECHHHHHhhcc---c----cccccchhhhhh--ccccEEEEEeeEEecccCcccccchh-cc--------CCccc
Confidence 6666666666544331 0 01000 001111 22456667789987766442211000 00 00001
Q ss_pred cch--hhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEc
Q psy775 707 YTK--GLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAV 784 (1460)
Q Consensus 707 ~~~--~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~ 784 (1460)
+.+ +-...++++++++ ...+..++..|+||...||++.+++|.+.++++. ..+|.+|.
T Consensus 272 ~~~k~~nk~~L~~~~gL~--------------~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~ 331 (487)
T COG0297 272 LPAKAENKVALQERLGLD--------------VDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGT 331 (487)
T ss_pred hhhhHHHHHHHHHHhCCC--------------CCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEec
Confidence 110 0012233333322 2245689999999999999999999999999987 24555565
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCC
Q psy775 785 PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 864 (1460)
Q Consensus 785 psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~ 864 (1460)
+. ..+...+..++.++.+++ .+.-..+..---.+|..||++++||..|++||+-+++|.=
T Consensus 332 gd-------~~le~~~~~la~~~~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry---- 391 (487)
T COG0297 332 GD-------PELEEALRALASRHPGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY---- 391 (487)
T ss_pred Cc-------HHHHHHHHHHHHhcCceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc----
Confidence 41 157788888888887752 2333445555556799999999999999999999999987
Q ss_pred CCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeC
Q psy775 865 PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN 944 (1460)
Q Consensus 865 ~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVn 944 (1460)
+++.|+++.+|.++... -.|||. + .| -..++++.
T Consensus 392 -GtvpIv~~tGGLadTV~---~~~~~~----~----------------------------------~~----~gtGf~f~ 425 (487)
T COG0297 392 -GTLPIVRETGGLADTVV---DRNEWL----I----------------------------------QG----VGTGFLFL 425 (487)
T ss_pred -CCcceEcccCCccceec---Cccchh----c----------------------------------cC----ceeEEEEe
Confidence 77999999999998321 122221 0 01 02357777
Q ss_pred CCCHHHHHHHHHHHhCCCHH----HHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhh
Q psy775 945 PYEIDAAAEVIHRALTMPED----ERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLI 997 (1460)
Q Consensus 945 P~d~~~iA~ai~~aL~m~~~----er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 997 (1460)
|.|.++++.||.+|+..-.. .+..+.++|. ...+++.=+++..+-.+...
T Consensus 426 ~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 426 QTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred cCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHh
Confidence 77999999999999986332 3333333333 23444444555554444433
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.4e-11 Score=133.96 Aligned_cols=81 Identities=42% Similarity=0.589 Sum_probs=73.0
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCC
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~ 115 (1460)
+++.++||||||||+++..+|+.+.++++++++|++|.++++..|+|+|||++.++...+.+..++++|+||+++..+|+
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~ 80 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGS 80 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCC
Confidence 35789999999999999999999999999999999999998889999999999888877777788899999999887554
Q ss_pred C
Q psy775 116 S 116 (1460)
Q Consensus 116 ~ 116 (1460)
.
T Consensus 81 ~ 81 (244)
T TIGR00685 81 C 81 (244)
T ss_pred c
Confidence 4
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG0853|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-09 Score=129.56 Aligned_cols=231 Identities=14% Similarity=0.093 Sum_probs=156.0
Q ss_pred hhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhc-------cchhhhc-
Q psy775 267 QGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQ-------AAPRVID- 338 (1460)
Q Consensus 267 ~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~-------~~~~~~~- 338 (1460)
+....+|.+--+++..++.|-..-..+ . .. .+.+...+||.+.+..... ...+..+
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~~L---~-----------~~--d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~ 268 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFVSL---S-----------NS--DITSTYPEIDGSWFTYGQYESHLELRLPVRLYRG 268 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhhhc---C-----------CC--Ccceeeccccchhccccccccchhcccccceeee
Confidence 444567877555655555555432221 0 00 1445556677655542110 1111111
Q ss_pred --cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCC-CcEEEEEEEcC-CCCChHHHHHHHHHHHHHHHHHhcccCCC
Q psy775 339 --TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL-EKVTLLQIAVP-SRTDVKEYQDLKEEMDQLVGRINGRFTTP 414 (1460)
Q Consensus 339 --~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~-~kvvLvqig~p-sr~~~~ey~~L~~ev~~lv~~IN~~fg~~ 414 (1460)
....++.++-|+.|-||+...|.||.++...-|+.. ....++..+.+ +.+...+..++-+++..++.+.+..
T Consensus 269 v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~---- 344 (495)
T KOG0853|consen 269 VSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL---- 344 (495)
T ss_pred ecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc----
Confidence 336788999999999999999999999988775411 12334444422 3233344445555666666654321
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCC
Q psy775 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYE 491 (1460)
Q Consensus 415 ~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D 491 (1460)
...++|..+.++.+-+.+++.+.+.++++..|-||+|++||||| +-|+|++..+|-++.+. .|++++| +
T Consensus 345 --g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-----glPvvAt~~GGP~EiV~~~~tG~l~dp-~ 416 (495)
T KOG0853|consen 345 --GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-----GLPVVATNNGGPAEIVVHGVTGLLIDP-G 416 (495)
T ss_pred --CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-----CCCEEEecCCCceEEEEcCCcceeeCC-c
Confidence 23577778888888889999999999999999999999999999 56679999999998884 3999999 7
Q ss_pred HH---HHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 492 ID---AAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 492 ~~---elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+ .+|++|.++.++|....+.+.+++.+..+.++
T Consensus 417 ~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs 453 (495)
T KOG0853|consen 417 QEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFS 453 (495)
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 76 69999999999988877777666655555466
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.1e-11 Score=133.89 Aligned_cols=69 Identities=39% Similarity=0.637 Sum_probs=65.2
Q ss_pred CCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1392 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1392 ~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
.+++.++||||||||+||+++|+++.++++++.+|++|++.+++.|||+|||+..++.++++++++.++
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~ 83 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLI 83 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEE
Confidence 467889999999999999999999999999999999999999888999999999999999999998764
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-10 Score=131.94 Aligned_cols=66 Identities=44% Similarity=0.592 Sum_probs=62.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCccc
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTY 1459 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~y 1459 (1460)
++.+|+|||||||+|++++|+.+.++++++++|++|++.+++.|+|||||++.++.++++++++.+
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l 67 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGL 67 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeE
Confidence 467899999999999999999999999999999999999999999999999999999998888755
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.3e-11 Score=133.76 Aligned_cols=62 Identities=44% Similarity=0.721 Sum_probs=44.1
Q ss_pred EEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1399 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1399 ~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
||||||||+||+++|+.+.++++++++|++|++.+++.|||||||++++++.+.+++++.||
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~ 62 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLA 62 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEE
Confidence 79999999999999999999999999999999999888999999999999999999999874
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >KOG1111|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.2e-10 Score=126.88 Aligned_cols=118 Identities=20% Similarity=0.312 Sum_probs=93.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+...|+.++||-+.||+++++.+..++-++||+. .++.+|.+ |....+++.++ +.+-. .
T Consensus 193 ~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~v----rfii~GDG-----Pk~i~lee~lE----k~~l~-------~ 252 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEV----RFIIIGDG-----PKRIDLEEMLE----KLFLQ-------D 252 (426)
T ss_pred CCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCe----eEEEecCC-----cccchHHHHHH----Hhhcc-------C
Confidence 34478999999999999999999999999999984 56666644 32222333333 22221 2
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM 881 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L 881 (1460)
.+.+.|.++++++-..|...|+|+-||+.|.||++..||+.| |-++|.+..+|..++|
T Consensus 253 rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc-----GL~VVsTrVGGIpeVL 310 (426)
T KOG1111|consen 253 RVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC-----GLPVVSTRVGGIPEVL 310 (426)
T ss_pred ceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC-----CCEEEEeecCCccccC
Confidence 366789999999999999999999999999999999999999 6788888899988855
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-08 Score=108.32 Aligned_cols=111 Identities=27% Similarity=0.363 Sum_probs=79.9
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 425 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~ 425 (1460)
++||+.+.||+..+++|+..+.+++|++ .++.+|... +... .+..+.. . + ....|.++ +.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~~~~---~~~~~~~-------~-~--~~~~v~~~-~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--EREY---LEELLAA-------L-L--LLDRVIFL-GG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--ChHH---HHHHHHh-------c-C--CcccEEEe-CC
Confidence 9999999999999999999998888764 566666432 1111 1111111 0 0 11234544 66
Q ss_pred C-CHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc
Q psy775 426 I-SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM 481 (1460)
Q Consensus 426 v-~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L 481 (1460)
+ +.+++..+++.||++++||..||++...+|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-----g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-----GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-----CCCEEEcCCCCcceEE
Confidence 6 5566666677799999999999999999999999 6778999998877654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.9e-09 Score=124.73 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=109.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+|+|++.+.+++. .|. .+.+.+|++ .|+.+|... .. . +. .+ +.. .+
T Consensus 203 ~~~~~i~y~G~l~~~~d~~-ll~---~la~~~p~~----~~vliG~~~-~~-~---~~-~~-------~~~-------~~ 254 (373)
T cd04950 203 LPRPVIGYYGAIAEWLDLE-LLE---ALAKARPDW----SFVLIGPVD-VS-I---DP-SA-------LLR-------LP 254 (373)
T ss_pred CCCCEEEEEeccccccCHH-HHH---HHHHHCCCC----EEEEECCCc-Cc-c---Ch-hH-------hcc-------CC
Confidence 4577899999999965543 333 445578876 466666441 10 0 00 11 111 12
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCC-----ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPL-----RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSl-----rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
-+.+.|.++++++.++|+.||++++|+. ++++++..+||||| |.|+|.|..+++.+
T Consensus 255 nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~-----G~PVVat~~~~~~~-------------- 315 (373)
T cd04950 255 NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAA-----GKPVVATPLPEVRR-------------- 315 (373)
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhcc-----CCCEEecCcHHHHh--------------
Confidence 3667899999999999999999999985 35678999999999 67888776443211
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+. .+ ..+.+.|+++++++|.++|..+..++..+.
T Consensus 316 ------------------------------------~~------~~-~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~--- 349 (373)
T cd04950 316 ------------------------------------YE------DE-VVLIADDPEEFVAAIEKALLEDGPARERRR--- 349 (373)
T ss_pred ------------------------------------hc------Cc-EEEeCCCHHHHHHHHHHHHhcCCchHHHHH---
Confidence 00 12 333456999999999998876544433322
Q ss_pred HhHHHhcCHHHHHHHHHHHHhh
Q psy775 974 RKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 974 ~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
.+.+.+||++.-+++++..|..
T Consensus 350 ~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 350 LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHCCHHHHHHHHHHHHHh
Confidence 2267889988888888766543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.2e-08 Score=108.76 Aligned_cols=178 Identities=23% Similarity=0.307 Sum_probs=124.8
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
..+++++||+.+.||+...++|+..+.++.|+ +.++.+|..... ...+..++.+.+. .+.+
T Consensus 199 ~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~g~~~~~--------~~~~~~~~~~~~~-------~~~v 259 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGPER--------REELEKLAKKLGL-------EDNV 259 (381)
T ss_pred ceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEEcCCCcc--------HHHHHHHHHHhCC-------CCcE
Confidence 37899999999999999999999999887776 455555544322 1223334444333 2335
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
.+.|.++.+++..+|+.||+++.||..||+|++.+|+++| +.|+|+|...|..+.+. .
T Consensus 260 ~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~-----g~pvi~~~~~~~~e~~~------~----------- 317 (381)
T COG0438 260 KFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVE------D----------- 317 (381)
T ss_pred EEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-----CCcEEECCCCChHHHhc------C-----------
Confidence 5588888889999999999999999999999999999998 67889999887666211 0
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
...++++++.|.+++++++..++++....+....+........+
T Consensus 318 ------------------------------------~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 318 ------------------------------------GETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEF 361 (381)
T ss_pred ------------------------------------CCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhc
Confidence 00145777779999999999999987333333322223333566
Q ss_pred CHHHHHHHHHHHHhh
Q psy775 981 DVNYWMRSFLKGMGT 995 (1460)
Q Consensus 981 ~~~~W~~~~l~~l~~ 995 (1460)
++..-.+.+.+-+..
T Consensus 362 ~~~~~~~~~~~~~~~ 376 (381)
T COG0438 362 SWERIAEQLLELYEE 376 (381)
T ss_pred CHHHHHHHHHHHHHH
Confidence 666666555554443
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-09 Score=119.39 Aligned_cols=99 Identities=19% Similarity=0.260 Sum_probs=77.3
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccc-ccCCCCc
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEI-IHPDGSR 117 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei-~~~g~~i 117 (1460)
||+|+||||++ +...+++.+++||++|+++ |+.++++|||++..+...+..-+ ..++++||+.+ ...++.+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l 74 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEK-GIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKIL 74 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHT-TCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhccc-ceEEEEEccCcccccccccccccchhhhcccccceeeecccccc
Confidence 69999999987 3445999999999999999 99999999999988887775322 36789999999 6666778
Q ss_pred cccCCCccchhhhhhHHHhhccCceeeecC
Q psy775 118 FVHPIPTEFEDKVSDLLKTLQEKVMSVHID 147 (1460)
Q Consensus 118 ~~~pI~ee~vdeL~ii~~L~q~~~~pVfLd 147 (1460)
+..+++.+.+..+ +..+..+++...+.+
T Consensus 75 ~~~~i~~~~~~~i--~~~~~~~~~~~~~~~ 102 (254)
T PF08282_consen 75 YEKPIDSDDVKKI--LKYLKEHNISFFFYT 102 (254)
T ss_dssp EEESB-HHHHHHH--HHHHHHTTCEEEEEE
T ss_pred hhhheeccchhhe--eehhhhccccccccc
Confidence 8899998876666 445555554444444
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG0853|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.4e-08 Score=118.34 Aligned_cols=193 Identities=16% Similarity=0.207 Sum_probs=145.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCC-CCEEEEEEEc-CCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL-EKVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~-~kVvLvqi~~-psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
....++.++-|+.|-||+...|.||.++...-|+-. ....++..+. ++.+...+..++..++.+++++.+..
T Consensus 271 ~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~------ 344 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL------ 344 (495)
T ss_pred ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc------
Confidence 346889999999999999999999999988775411 1233333332 23344455556777788888765332
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
+..++|....++.+.+.++..+.+.+++|..|-||+|++||||| +-|+|++..+|-.+
T Consensus 345 g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-----glPvvAt~~GGP~E----------------- 402 (495)
T KOG0853|consen 345 GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-----GLPVVATNNGGPAE----------------- 402 (495)
T ss_pred CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-----CCCEEEecCCCceE-----------------
Confidence 23577877888888899999999999999999999999999999 78999999999888
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHH---HHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID---AAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~---~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+|.+..+| ++++| +.+ .+|++|.+..+.+....+.+.+++
T Consensus 403 ----------------------------iV~~~~tG--------~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~ 445 (495)
T KOG0853|consen 403 ----------------------------IVVHGVTG--------LLIDP-GQEAVAELADALLKLRRDPELWARMGKNGL 445 (495)
T ss_pred ----------------------------EEEcCCcc--------eeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45555555 89999 777 599999999999888777777775
Q ss_pred HhHHHhcCHHHHHHHHHHHHhhh
Q psy775 974 RKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 974 ~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.+.-+.+++....+++..-+..+
T Consensus 446 ~rV~e~fs~~~~~~ri~~~~~~~ 468 (495)
T KOG0853|consen 446 KRVKEMFSWQHYSERIASVLGKY 468 (495)
T ss_pred HHHHHHHhHHHHHHHHHHHhHhc
Confidence 55544477655555555555543
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-07 Score=111.75 Aligned_cols=239 Identities=12% Similarity=0.038 Sum_probs=134.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEec--CCCCccccccCCCc--HHHHhhhccCceeeeccHHhHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHI--PFPPWDIFRLFPWS--DEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHi--PFPs~eifr~LP~r--~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
..|+|++|++....++..+..+.- +.++....|- +|- +..|+. ...+.. .+|++-.-+....+++
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~----~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~--~ad~~~~~s~~~~~~l 156 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKL----GIPVAHVEAGLRSFD-----RGMPDEENRHAIDK--LSDLHFAPTEEARRNL 156 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHc----CCCEEEEecccccCC-----CCCCchHHHHHHHH--HhhhccCCCHHHHHHH
Confidence 369999998876666655544321 4666654431 120 011211 111111 2454444444333333
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeeccc-Cchhhhhhhccchhhh-c----cCCeEEEEecCccc---cCCHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAI-PYERFVQLAQAAPRVI-D----TKQKIVLGVDRLDY---TKGLV 357 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGI-D~~~f~~~~~~~~~~~-~----~~~kvIL~VgRLd~---~KGI~ 357 (1460)
.+ .+...-+|.++++++ |...+..........+ + .++.+++.++|+.. .||+.
T Consensus 157 ~~------------------~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~ 218 (363)
T cd03786 157 LQ------------------EGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLE 218 (363)
T ss_pred HH------------------cCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHH
Confidence 32 122344677788774 5444332211111111 1 33457778999875 79999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
.+++|++++.++ + +.++..+. .+....+++. +.+.+.. -..+ .+.+....+++..+|++
T Consensus 219 ~l~~al~~l~~~--~----~~vi~~~~-----~~~~~~l~~~----~~~~~~~-----~~~v-~~~~~~~~~~~~~l~~~ 277 (363)
T cd03786 219 EILEALAELAEE--D----VPVVFPNH-----PRTRPRIREA----GLEFLGH-----HPNV-LLISPLGYLYFLLLLKN 277 (363)
T ss_pred HHHHHHHHHHhc--C----CEEEEECC-----CChHHHHHHH----HHhhccC-----CCCE-EEECCcCHHHHHHHHHc
Confidence 999999988543 2 33433221 1222233333 3332210 0123 44577788999999999
Q ss_pred ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc-cccEEECC-CCHHHHHHHHHHHcCCCHHH
Q psy775 438 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM-HEALICNP-YEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 438 ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L-~~allVNP-~D~~elA~AI~~aL~m~~~e 509 (1460)
||++|.+|- | +..|||+| +.|+|++...+...++ ..|..+.+ .|+++++++|.++++++...
T Consensus 278 ad~~v~~Sg----g-i~~Ea~~~-----g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~~~ 341 (363)
T cd03786 278 ADLVLTDSG----G-IQEEASFL-----GVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEFAY 341 (363)
T ss_pred CcEEEEcCc----c-HHhhhhhc-----CCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCchhh
Confidence 999999994 4 46999999 4556777655544444 34444433 37999999999999876444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=3e-09 Score=121.21 Aligned_cols=84 Identities=18% Similarity=0.264 Sum_probs=68.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCccccc--CC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIH--PD 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~--~g 114 (1460)
++|+|+||||++- ...+++.+++||++++++ |+.+++||||++..+...+ ++.. .++|+||+.+.. .+
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~ai~~~~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 5 VIALDLDGTLLTP-----KKTILPESLEALARAREA-GYKVIIVTGRHHVAIHPFYQALALDT-PAICCNGTYLYDYQAK 77 (272)
T ss_pred EEEEeCCCceECC-----CCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHhcCCCC-CEEEcCCcEEEecCCC
Confidence 7899999999962 345899999999999999 9999999999988776554 3322 478999999985 45
Q ss_pred CCccccCCCccchhhh
Q psy775 115 GSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 115 ~~i~~~pI~ee~vdeL 130 (1460)
+.++..+++.+.+..+
T Consensus 78 ~~l~~~~l~~~~~~~i 93 (272)
T PRK10530 78 KVLEADPLPVQQALQV 93 (272)
T ss_pred EEEEecCCCHHHHHHH
Confidence 5678889999877766
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.3e-08 Score=112.61 Aligned_cols=166 Identities=14% Similarity=0.189 Sum_probs=104.5
Q ss_pred EEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecCccccCCHHHHH-HHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgRLd~~KGI~~lL-~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
.++.++|+|+|.+.+..... ..... ..++++++.+++....||...++ +|++.+.+ ++ +.++.++.+
T Consensus 152 ~~~~~i~n~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~----~~~~~i~G~---- 220 (350)
T cd03785 152 DKAVVTGNPVREEILALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR--KR----LQVIHQTGK---- 220 (350)
T ss_pred CcEEEECCCCchHHhhhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cC----eEEEEEcCC----
Confidence 46778899999887754321 01111 15677888898888888887655 77776642 22 333323211
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeE
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVL 469 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gvl 469 (1460)
+ +.+++++.++++ . ..+ .+.|.+ +++..+|+.||+++.+| | +.+..|||+| +.|+
T Consensus 221 g-~~~~l~~~~~~~-----~-------~~v-~~~g~~--~~~~~~l~~ad~~v~~s---g-~~t~~Eam~~-----G~Pv 275 (350)
T cd03785 221 G-DLEEVKKAYEEL-----G-------VNY-EVFPFI--DDMAAAYAAADLVISRA---G-ASTVAELAAL-----GLPA 275 (350)
T ss_pred c-cHHHHHHHHhcc-----C-------CCe-EEeehh--hhHHHHHHhcCEEEECC---C-HhHHHHHHHh-----CCCE
Confidence 1 223444433321 1 113 345655 78899999999999877 3 5789999999 5556
Q ss_pred EEcCCCC--------chhcc---cccEEECCC--CHHHHHHHHHHHcCCCHHHHHHH
Q psy775 470 IVSPFAG--------AGEQM---HEALICNPY--EIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 470 VlSe~aG--------aa~~L---~~allVNP~--D~~elA~AI~~aL~m~~~er~~R 513 (1460)
|++...| .++.+ +.|++++|. |+++++++|.++++.++..++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 332 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMA 332 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 7765443 13334 238899987 89999999999997544333333
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.5e-09 Score=120.37 Aligned_cols=85 Identities=22% Similarity=0.315 Sum_probs=69.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccccc-CCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIH-PDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~-~g~~ 116 (1460)
++|+|+||||++ .+..+++++++||++|+++ |+.+++||||++..+...+.--+ ..++|+||+.+.. .++.
T Consensus 4 li~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 4 LAAFDMDGTLLM-----PDHHLGEKTLSTLARLRER-DITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred EEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 789999999996 2346999999999999999 99999999999988776653211 2468999999985 5567
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 78 l~~~~i~~~~~~~i 91 (272)
T PRK15126 78 LHRQDLPADVAELV 91 (272)
T ss_pred EEeecCCHHHHHHH
Confidence 88899999877665
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.1e-09 Score=120.27 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=69.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc--ceeEccCCccccc--
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG--LTYAGNHGLEIIH-- 112 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~--~~~ig~hGaei~~-- 112 (1460)
++|+|+||||++ ....+++.+++||++|+++ |+.++|||||++..+...+ ++.. ..++++||+.+..
T Consensus 5 li~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~ 78 (270)
T PRK10513 5 LIAIDMDGTLLL-----PDHTISPAVKQAIAAARAK-GVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAA 78 (270)
T ss_pred EEEEecCCcCcC-----CCCccCHHHHHHHHHHHHC-CCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECC
Confidence 799999999996 2346999999999999999 9999999999988876554 3332 2478999999974
Q ss_pred CCCCccccCCCccchhhh
Q psy775 113 PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL 130 (1460)
.++.++..+++.+.+..+
T Consensus 79 ~~~~i~~~~l~~~~~~~i 96 (270)
T PRK10513 79 DGETVAQTALSYDDYLYL 96 (270)
T ss_pred CCCEEEecCCCHHHHHHH
Confidence 466788899998876654
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.8e-09 Score=118.36 Aligned_cols=85 Identities=21% Similarity=0.280 Sum_probs=68.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-ccc-ceeEccCCccccc-CCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IEG-LTYAGNHGLEIIH-PDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~~-~~~ig~hGaei~~-~g~~ 116 (1460)
++|+|+||||++- +..+++++++||++++++ |++++|||||+...+...+. +.. ..++|+||+.+.. .++.
T Consensus 4 li~~DlDGTLl~~-----~~~is~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 4 VVASDLDGTLLSP-----DHTLSPYAKETLKLLTAR-GIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred EEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 7899999999962 346999999999999999 99999999999888765543 221 2468999999985 5567
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 78 i~~~~l~~~~~~~i 91 (266)
T PRK10976 78 IFSHNLDRDIASDL 91 (266)
T ss_pred ehhhcCCHHHHHHH
Confidence 78889998876665
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.2e-08 Score=115.88 Aligned_cols=171 Identities=13% Similarity=0.067 Sum_probs=106.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHh----CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK----HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~----~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~ 814 (1460)
+++++|+++||....||+...++++..++.+ .|+ +.++.++... + .+++++++... +
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G~~----~---~~~~~L~~~~~--~------ 264 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICGRN----K---KLQSKLESRDW--K------ 264 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEECCC----H---HHHHHHHhhcc--c------
Confidence 5788999999999999999999999876632 343 2333333211 1 23334433210 1
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchh
Q psy775 815 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
.-+.+.|.++ ++..+|++||++|.+| | ++++.||||| +.|+|++.....-+ .+ |
T Consensus 265 ---~~v~~~G~~~--~~~~l~~aaDv~V~~~---g-~~ti~EAma~-----g~PvI~~~~~pgqe-~g-----n------ 318 (382)
T PLN02605 265 ---IPVKVRGFVT--NMEEWMGACDCIITKA---G-PGTIAEALIR-----GLPIILNGYIPGQE-EG-----N------ 318 (382)
T ss_pred ---CCeEEEeccc--cHHHHHHhCCEEEECC---C-cchHHHHHHc-----CCCEEEecCCCccc-hh-----h------
Confidence 1145667774 7999999999999866 3 7899999999 78899988532111 00 0
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
+ +++ .. .| .++ .+.|+++++++|.+.+.++++.++...+..+
T Consensus 319 ---------------~-~~i------------~~--~g------~g~--~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~ 360 (382)
T PLN02605 319 ---------------V-PYV------------VD--NG------FGA--FSESPKEIARIVAEWFGDKSDELEAMSENAL 360 (382)
T ss_pred ---------------H-HHH------------Hh--CC------cee--ecCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0 010 00 11 122 2479999999999999974444444444556
Q ss_pred hHHHhcCHHHHHHHHHHH
Q psy775 975 KREKVHDVNYWMRSFLKG 992 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l~~ 992 (1460)
++...+....-++..++.
T Consensus 361 ~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 361 KLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HhcCCchHHHHHHHHHHH
Confidence 666666666555554433
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.9e-09 Score=118.30 Aligned_cols=93 Identities=18% Similarity=0.303 Sum_probs=73.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc-cc-ceeEccCCcccccC-CCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI-EG-LTYAGNHGLEIIHP-DGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~-~~-~~~ig~hGaei~~~-g~~ 116 (1460)
++|+|+||||++. ...++++++++|++|+++ |+.+++||||+...+...+.- .. ..++++||+.+... ++.
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 74 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEI 74 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCE
Confidence 4799999999972 346999999999999999 999999999998887766532 22 25789999999876 467
Q ss_pred ccccCCCccchhhhhhHHHhhccC
Q psy775 117 RFVHPIPTEFEDKVSDLLKTLQEK 140 (1460)
Q Consensus 117 i~~~pI~ee~vdeL~ii~~L~q~~ 140 (1460)
++..+++.+.+.++ +..+.+.+
T Consensus 75 i~~~~i~~~~~~~i--~~~~~~~~ 96 (256)
T TIGR00099 75 LYKKPLDLDLVEEI--LNFLKKHG 96 (256)
T ss_pred EeecCCCHHHHHHH--HHHHHHcC
Confidence 88899999877776 33344444
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.6e-09 Score=119.00 Aligned_cols=85 Identities=25% Similarity=0.405 Sum_probs=73.9
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cccceeEccCCcccccCCC
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~~~~~ig~hGaei~~~g~ 115 (1460)
-++++|+||||++ ++..+++.++++|++++++ |+.++|+|||++..+...+. ..+ .++++||+++...++
T Consensus 4 kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~~~ 76 (264)
T COG0561 4 KLLAFDLDGTLLD-----SNKTISPETKEALARLREK-GVKVVLATGRPLPDVLSILEELGLDG-PLITFNGALIYNGGE 76 (264)
T ss_pred eEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCc-cEEEeCCeEEecCCc
Confidence 4899999999997 3445999999999999999 99999999999988877663 333 578999999999988
Q ss_pred CccccCCCccchhhh
Q psy775 116 SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 116 ~i~~~pI~ee~vdeL 130 (1460)
.++..+++.+.+..+
T Consensus 77 ~i~~~~l~~~~~~~i 91 (264)
T COG0561 77 LLFQKPLSREDVEEL 91 (264)
T ss_pred EEeeecCCHHHHHHH
Confidence 899999999887777
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-07 Score=112.12 Aligned_cols=239 Identities=11% Similarity=0.081 Sum_probs=134.0
Q ss_pred CCCEEEEeCcchhHH-HHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhc--cCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLA-ANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML--GCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~ll-P~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL--~aDlIgF~t~~yar~FL 287 (1460)
..|+|.+|......+ .....+.+ ++++....+ ---+.+.+..+| +++.+-+. .||++--.+....++++
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~-----~ipv~h~~~-g~~s~~~~~~~~--~~~~r~~~~~~ad~~~~~s~~~~~~l~ 157 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYL-----QIPVGHVEA-GLRTGDRYSPMP--EEINRQLTGHIADLHFAPTEQAKDNLL 157 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHh-----CCCEEEEeC-CCCcCCCCCCCc--cHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 369999996544444 34443322 466653211 111111121122 22222111 15666556666655554
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeeccc-Cchhhhhhhccchhhhc---cCCeEEEE-ecCcc-ccCCHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAI-PYERFVQLAQAAPRVID---TKQKIVLG-VDRLD-YTKGLVHRLK 361 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGI-D~~~f~~~~~~~~~~~~---~~~kvIL~-VgRLd-~~KGI~~lL~ 361 (1460)
+ .+....+|.++++|+ |.............+.+ .++++++. ..|.. ..||+..+++
T Consensus 158 ~------------------~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~ 219 (365)
T TIGR00236 158 R------------------ENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFK 219 (365)
T ss_pred H------------------cCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHH
Confidence 4 112234678889986 43222211111112222 22345554 44643 4599999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEE
Q psy775 362 AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441 (1460)
Q Consensus 362 Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~ 441 (1460)
|+.++.+++|+++ ++.++.|. . . .+.++. ...+. ...| ++.+.++..++..+|+.||++
T Consensus 220 a~~~l~~~~~~~~----~vi~~~~~-~--~----~~~~~~---~~~~~------~~~v-~~~~~~~~~~~~~~l~~ad~v 278 (365)
T TIGR00236 220 AIREIVEEFEDVQ----IVYPVHLN-P--V----VREPLH---KHLGD------SKRV-HLIEPLEYLDFLNLAANSHLI 278 (365)
T ss_pred HHHHHHHHCCCCE----EEEECCCC-h--H----HHHHHH---HHhCC------CCCE-EEECCCChHHHHHHHHhCCEE
Confidence 9999998888753 44343332 1 1 112221 12211 1234 455889999999999999999
Q ss_pred EEccCCCCCCcceeeeeeeccCCCCCeEEEc-CCCCchhccc-c-cEEECCCCHHHHHHHHHHHcCCCH
Q psy775 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVS-PFAGAGEQMH-E-ALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 442 VvpSlrEGfnLValEamAcq~~~~~GvlVlS-e~aGaa~~L~-~-allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
+.+| |.+..|||+| +.|+|.+ ..+|..+.+. + ++++ |.|+++++++|.++|+.++
T Consensus 279 v~~S-----g~~~~EA~a~-----g~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 279 LTDS-----GGVQEEAPSL-----GKPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDPD 336 (365)
T ss_pred EECC-----hhHHHHHHHc-----CCCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhChH
Confidence 9988 4557999999 5566775 4444444432 2 5666 5799999999999998653
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-07 Score=109.40 Aligned_cols=166 Identities=16% Similarity=0.164 Sum_probs=107.5
Q ss_pred EEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecCccccCCHHHHH-HHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgRLd~~KGI~~lL-~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
.++.++|+|+|.+.+.+.... .... ..+.++|+.+|+..+.|++..++ +|++++.+. | .+++++|.+.
T Consensus 154 ~~i~vi~n~v~~~~~~~~~~~-~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-----~~~~~~G~g~--- 223 (357)
T PRK00726 154 PKAVVTGNPVREEILALAAPP-ARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-----QVIHQTGKGD--- 223 (357)
T ss_pred CCEEEECCCCChHhhcccchh-hhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-----EEEEEcCCCc---
Confidence 578899999998776532111 1111 14678889999999999987777 898877432 2 2344444321
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeE
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVL 469 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gvl 469 (1460)
.+++.+.++ . +.. +.+.|.+ +++..+|+.||+++.+| | +.+.+|||+| +.|+
T Consensus 224 ---~~~~~~~~~-----~-------~~~--v~~~g~~--~~~~~~~~~~d~~i~~~---g-~~~~~Ea~~~-----g~Pv 275 (357)
T PRK00726 224 ---LEEVRAAYA-----A-------GIN--AEVVPFI--DDMAAAYAAADLVICRA---G-ASTVAELAAA-----GLPA 275 (357)
T ss_pred ---HHHHHHHhh-----c-------CCc--EEEeehH--hhHHHHHHhCCEEEECC---C-HHHHHHHHHh-----CCCE
Confidence 122222211 1 112 3345665 68889999999999877 3 5788999999 4555
Q ss_pred EEcCCCC--------chhcc---cccEEECCCC--HHHHHHHHHHHcCCCHHHHHHHHH
Q psy775 470 IVSPFAG--------AGEQM---HEALICNPYE--IDAAAEVIHRALTMPEDERTLRMN 515 (1460)
Q Consensus 470 VlSe~aG--------aa~~L---~~allVNP~D--~~elA~AI~~aL~m~~~er~~R~~ 515 (1460)
|++-..| .++.+ +.|++++|.| +++++++|.++++++...++++.+
T Consensus 276 v~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 334 (357)
T PRK00726 276 ILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEA 334 (357)
T ss_pred EEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 7664422 12334 2388899888 999999999999986554444433
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.7e-07 Score=108.25 Aligned_cols=162 Identities=16% Similarity=0.129 Sum_probs=100.7
Q ss_pred EEeecccCchhhhhhhccchhhhc-cCCeEEEEecCccccCCHHHH-HHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHH
Q psy775 315 RPLPIAIPYERFVQLAQAAPRVID-TKQKIVLGVDRLDYTKGLVHR-LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKE 392 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~~~~~~-~~~kvIL~VgRLd~~KGI~~l-L~Af~~lL~~~P~~~~kvvLvqig~psr~~~~e 392 (1460)
.++|+|+|...+...... ..... .+.++|+++||....|++... ++|++++.+. ++ .++.++ ++++.
T Consensus 153 ~~i~n~v~~~~~~~~~~~-~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~----g~~~~ 221 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPVPR-ERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQT----GKNDL 221 (348)
T ss_pred eEEcCCcCHHHhcccchh-hhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEEC----CcchH
Confidence 688999997665432111 11111 467789999999889997664 4788777542 22 122233 12221
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc
Q psy775 393 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS 472 (1460)
Q Consensus 393 y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS 472 (1460)
.++++. +.+.+ ...++.+. . .++..+|+.||++|.+| | +.+.+|||+| +.|+|++
T Consensus 222 -~~l~~~----~~~~~-------l~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~-----g~Pvv~~ 276 (348)
T TIGR01133 222 -EKVKNV----YQELG-------IEAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAA-----GVPAILI 276 (348)
T ss_pred -HHHHHH----HhhCC-------ceEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHc-----CCCEEEe
Confidence 233333 22222 12233332 2 27889999999999865 4 6899999999 5666877
Q ss_pred CCCCch-------hcc---cccEEECCCC--HHHHHHHHHHHcCCCHHHHHH
Q psy775 473 PFAGAG-------EQM---HEALICNPYE--IDAAAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 473 e~aGaa-------~~L---~~allVNP~D--~~elA~AI~~aL~m~~~er~~ 512 (1460)
...|.. +.+ ..|++++|.| +++++++|.++++.+...+++
T Consensus 277 ~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 328 (348)
T TIGR01133 277 PYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAM 328 (348)
T ss_pred eCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHH
Confidence 665422 234 2388999887 999999999999865444333
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-08 Score=115.43 Aligned_cols=89 Identities=20% Similarity=0.290 Sum_probs=68.6
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCccccc
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIH 112 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~ 112 (1460)
.+..++|+|+||||+.- ...+++.++++|++|+++ |+++++||||+...+...+ ++.+..+||+||+.+..
T Consensus 5 ~~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~ 78 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREA-QVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQL 78 (271)
T ss_pred CCCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEe
Confidence 35679999999999962 345889999999999999 9999999999988876554 34334589999999986
Q ss_pred CCC-------CccccCCCccchhhh
Q psy775 113 PDG-------SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~-------~i~~~pI~ee~vdeL 130 (1460)
.++ .++..+++.+.+..+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 79 DEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcccCCCCceEeecCCCHHHHHHH
Confidence 532 234566777665555
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-06 Score=104.22 Aligned_cols=138 Identities=9% Similarity=0.124 Sum_probs=88.0
Q ss_pred CCe-EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCccc
Q psy775 340 KQK-IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418 (1460)
Q Consensus 340 ~~k-vIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~p 418 (1460)
+++ +++..|++...||+..+++++.+ .|++ .++.++.. +.+ +++++++++.+.+ ..
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~----~~~~----~~viv~G~---~~~----~~~~l~~~~~~~~--------~~ 257 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS----VPDL----QVVVVCGK---NEA----LKQSLEDLQETNP--------DA 257 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh----CCCc----EEEEEeCC---CHH----HHHHHHHHHhcCC--------Cc
Confidence 444 55667999999999999988743 3543 35545421 222 2334444433221 13
Q ss_pred EEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC-CCCch----hcc-cccEEECCCCH
Q psy775 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAG----EQM-HEALICNPYEI 492 (1460)
Q Consensus 419 Iv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe-~aGaa----~~L-~~allVNP~D~ 492 (1460)
|++ .|.++ ++..+|++||+++. ++.|++++||||| +.|+|++. ..|.. ..+ ..+..+.+.|+
T Consensus 258 v~~-~g~~~--~~~~l~~~aD~~v~----~~gg~t~~EA~a~-----g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~ 325 (380)
T PRK13609 258 LKV-FGYVE--NIDELFRVTSCMIT----KPGGITLSEAAAL-----GVPVILYKPVPGQEKENAMYFERKGAAVVIRDD 325 (380)
T ss_pred EEE-Eechh--hHHHHHHhccEEEe----CCCchHHHHHHHh-----CCCEEECCCCCCcchHHHHHHHhCCcEEEECCH
Confidence 444 47764 57889999999874 4558999999999 56668876 34421 122 22445556899
Q ss_pred HHHHHHHHHHcCCCHHHHHH
Q psy775 493 DAAAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 493 ~elA~AI~~aL~m~~~er~~ 512 (1460)
++++++|.++++++...+++
T Consensus 326 ~~l~~~i~~ll~~~~~~~~m 345 (380)
T PRK13609 326 EEVFAKTEALLQDDMKLLQM 345 (380)
T ss_pred HHHHHHHHHHHCCHHHHHHH
Confidence 99999999999875544333
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.7e-08 Score=112.91 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=65.3
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc---c-ceeEccCCcccccCC
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE---G-LTYAGNHGLEIIHPD 114 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~---~-~~~ig~hGaei~~~g 114 (1460)
-++++|+||||+. ++..+++.+++||++++++ |+.++|||||++..+.+.++.. . ..++++||+.+...+
T Consensus 6 klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~ 79 (247)
T PTZ00174 6 TILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDG 79 (247)
T ss_pred eEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECC
Confidence 3899999999996 3456899999999999999 9999999999998888777532 1 245899999998777
Q ss_pred CCccccCCC
Q psy775 115 GSRFVHPIP 123 (1460)
Q Consensus 115 ~~i~~~pI~ 123 (1460)
+.++..+++
T Consensus 80 ~~i~~~~i~ 88 (247)
T PTZ00174 80 ELFHSQSIL 88 (247)
T ss_pred eEEEEEcch
Confidence 777777654
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.6e-08 Score=99.98 Aligned_cols=128 Identities=27% Similarity=0.352 Sum_probs=86.5
Q ss_pred CeEEEEecCccccCCHHHHHH-HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLK-AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~-Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pI 419 (1460)
..++++.|++.+.||+..+++ |++++.+++|+. .|..+|... + ++.++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~~~-----~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGNGP-----D------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECESS------------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeCCH-----H------HHHHh----cC-------CCE
Confidence 357899999999999999999 999999999974 466666421 1 12221 01 123
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccC-CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHH
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAA 495 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSl-rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~el 495 (1460)
. +.|.+ +++.++|+.||+++.|+. .+|++...+|||++ |.|+|+|.. |....+. .++.+ +.|++++
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-----G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l 125 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-----GKPVIASDN-GAEGIVEEDGCGVLV-ANDPEEL 125 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-----T--EEEEHH-HCHCHS---SEEEE--TT-HHHH
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-----CCCEEECCc-chhhheeecCCeEEE-CCCHHHH
Confidence 3 45777 689999999999999985 77999999999999 677788888 5555542 36667 8899999
Q ss_pred HHHHHHHcC
Q psy775 496 AEVIHRALT 504 (1460)
Q Consensus 496 A~AI~~aL~ 504 (1460)
+++|.++++
T Consensus 126 ~~~i~~l~~ 134 (135)
T PF13692_consen 126 AEAIERLLN 134 (135)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999875
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.7e-08 Score=108.93 Aligned_cols=76 Identities=25% Similarity=0.427 Sum_probs=63.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCccc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFV 119 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i~~ 119 (1460)
++|+|+||||++. +...+++.++++|++|+++ |+.++++|||+...+.+++......+++.||+.+...++.++.
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEE
Confidence 4799999999973 2256899999999999999 8999999999999888777543466899999999987766555
Q ss_pred c
Q psy775 120 H 120 (1460)
Q Consensus 120 ~ 120 (1460)
.
T Consensus 76 ~ 76 (204)
T TIGR01484 76 E 76 (204)
T ss_pred c
Confidence 4
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.6e-08 Score=113.26 Aligned_cols=63 Identities=37% Similarity=0.559 Sum_probs=58.3
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGL 1457 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~ 1457 (1460)
+.++++||||||++++++|+++.+++.++++|++|++..++.++|+|||+..++.++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 679999999999999999999999999999999999877889999999999999998875443
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.6e-08 Score=110.80 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=60.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccC--C
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHP--D 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~--g 114 (1460)
++|+|+||||++ +...+|+++++||++|+++ |+++++||||+...+.+.. ++.. .++++||+.+... +
T Consensus 5 li~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~-~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 5 AIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKL-GIPVILATGNVLCFARAAAKLIGTSG-PVIAENGGVISVGFDG 77 (230)
T ss_pred EEEEecCCCcCC-----CCCccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHhCCCC-cEEEecCeEEEEcCCC
Confidence 799999999996 2345999999999999999 9999999999988876544 3332 4789999998764 4
Q ss_pred CCccccCCC
Q psy775 115 GSRFVHPIP 123 (1460)
Q Consensus 115 ~~i~~~pI~ 123 (1460)
+.++..+++
T Consensus 78 ~~~~~~~~~ 86 (230)
T PRK01158 78 KRIFLGDIE 86 (230)
T ss_pred CEEEEcchH
Confidence 455555553
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.7e-08 Score=109.81 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=68.9
Q ss_pred CCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc----ceeEccCCccc
Q psy775 35 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG----LTYAGNHGLEI 110 (1460)
Q Consensus 35 ~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~----~~~ig~hGaei 110 (1460)
+..+.++|||+||||++ ++..++++++++|++|+++ +.++++|||+...+.+.+.... ..+++.||+.+
T Consensus 4 ~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~--i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i 76 (245)
T PLN02423 4 RKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKV--VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVA 76 (245)
T ss_pred CccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhC--CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEE
Confidence 44566888999999996 3446899999999999965 8999999999888877665431 35789999999
Q ss_pred ccCCCCccccC----CCccchhhh
Q psy775 111 IHPDGSRFVHP----IPTEFEDKV 130 (1460)
Q Consensus 111 ~~~g~~i~~~p----I~ee~vdeL 130 (1460)
...|+.++..+ ++.+.+.++
T Consensus 77 ~~~g~~i~~~~l~~~l~~~~~~~i 100 (245)
T PLN02423 77 HKDGKLIGTQSLKSFLGEDKLKEF 100 (245)
T ss_pred EeCCEEEEEecccccCCHHHHHHH
Confidence 98877777744 444555544
|
|
| >KOG1387|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.2e-06 Score=97.22 Aligned_cols=194 Identities=15% Similarity=0.268 Sum_probs=139.0
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC--CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE--HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~--~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.....+++++.+.|.|+.. .|+-|..++++.|. ...++.|+.+|. .|+. ++ ++..+.++.++.+++-.-
T Consensus 267 ~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRne-eD-~ervk~Lkd~a~~L~i~~----- 337 (465)
T KOG1387|consen 267 ERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNE-ED-EERVKSLKDLAEELKIPK----- 337 (465)
T ss_pred CcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCCh-hh-HHHHHHHHHHHHhcCCcc-----
Confidence 3457799999999999999 78888889999997 444566665554 3432 22 344456777777776541
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
-+.|.-++|.+++..++.-|-+.+-+-..|-||+.+.||||+ |.+.++..+|-.. | =+|.||
T Consensus 338 --~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA------GlIpi~h~SgGP~-l---DIV~~~------ 399 (465)
T KOG1387|consen 338 --HVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA------GLIPIVHNSGGPL-L---DIVTPW------ 399 (465)
T ss_pred --ceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc------CceEEEeCCCCCc-e---eeeecc------
Confidence 166778999999999999999999999999999999999998 4444555444222 1 133333
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
.|. ..+.+. | +.++-|++|.+++.+..++|....+..++.
T Consensus 400 ----------------------------------~G~----~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s 439 (465)
T KOG1387|consen 400 ----------------------------------DGE----TTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKS 439 (465)
T ss_pred ----------------------------------CCc----cceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 221 123444 2 677889999999999999887766666777
Q ss_pred HHhcCHHHHHHHHHHHHhhhhhc
Q psy775 977 EKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 977 v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+...+-....+.|.+.+....++
T Consensus 440 ~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 440 LARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HHHhhHHHHHHhHhHHHHHhhcc
Confidence 77777677777777666655544
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.5e-08 Score=121.44 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=68.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc-c-------eeEccCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG-L-------TYAGNHGL 108 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~-~-------~~ig~hGa 108 (1460)
++|+|+||||++ ++..+++++++||++++++ |+.++|||||+...+...+ ++.. . ..+++||+
T Consensus 310 LIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA 383 (580)
T PLN02887 310 YIFCDMDGTLLN-----SKSQISETNAKALKEALSR-GVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGL 383 (580)
T ss_pred EEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCe
Confidence 899999999996 2346999999999999999 9999999999988876544 3321 1 24578999
Q ss_pred cccc-CCCCccccCCCccchhhh
Q psy775 109 EIIH-PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 109 ei~~-~g~~i~~~pI~ee~vdeL 130 (1460)
.+.. .++.++..+++.+.+.++
T Consensus 384 ~I~d~~g~~I~~~~L~~e~v~eI 406 (580)
T PLN02887 384 LVYGRQGREIYRSNLDQEVCREA 406 (580)
T ss_pred EEEECCCcEEEEEeCCHHHHHHH
Confidence 9974 556788899999877766
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.5e-06 Score=99.67 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=89.6
Q ss_pred CCeE-EEEec-CccccC-CHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCc
Q psy775 340 KQKI-VLGVD-RLDYTK-GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416 (1460)
Q Consensus 340 ~~kv-IL~Vg-RLd~~K-GI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~ 416 (1460)
++++ ++..| |....| ++..+++|++.+.+++|++ .+++++. +.+..+++++ .+.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~~~~~~~----~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKRREQIEE----ALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----ChhhHHHHHH----HHhhc----C--CC
Confidence 4444 34434 666654 4789999999998888864 3444442 1222223333 22221 0 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc-----------------CCCCchh
Q psy775 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS-----------------PFAGAGE 479 (1460)
Q Consensus 417 ~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS-----------------e~aGaa~ 479 (1460)
.+.++ ..++..+|++||+++.+| |.+.+|+|+| +.|+|++ .+.|..+
T Consensus 247 -~v~~~-----~~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-----G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 -EVTLL-----DGQKREAMAAADAALAAS-----GTVTLELALL-----KVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred -CeEEE-----cccHHHHHHhCCEEEECc-----cHHHHHHHHh-----CCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 13333 247899999999999998 7788899999 5566776 3444445
Q ss_pred cccc-----cEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 480 QMHE-----ALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 480 ~L~~-----allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
.+.+ .++.+..|+++++++|.++|++++..++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 349 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLPLLADGARRQALL 349 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 5533 366788899999999999999765544433
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.4e-06 Score=99.11 Aligned_cols=137 Identities=14% Similarity=0.153 Sum_probs=85.3
Q ss_pred CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
..+++++||+...||+..+++++ ++..|++ .++.++. ..+ ++++++.+. .+.. ..+
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~----~~vvv~G----~~~---~l~~~l~~~---~~~~------~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANA----QVVMICG----KSK---ELKRSLTAK---FKSN------ENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCc----eEEEEcC----CCH---HHHHHHHHH---hccC------CCe-
Confidence 34567899999999999999985 3444554 3444442 111 122232221 1111 123
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc------cccEEECCCCHHH
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM------HEALICNPYEIDA 494 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L------~~allVNP~D~~e 494 (1460)
.+.|++ +++..+|++||+++.. +.|++..||||| +.|+|++...+..+.. ..+.-+-+.|.++
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-----G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~ 327 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLAR-----CIPMIFLNPAPGQELENALYFEEKGFGKIADTPEE 327 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHh-----CCCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHH
Confidence 345765 5789999999999863 458899999999 5666887543322211 1123333569999
Q ss_pred HHHHHHHHcCCCHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~ 512 (1460)
++++|.+++++++..+++
T Consensus 328 l~~~i~~ll~~~~~~~~m 345 (391)
T PRK13608 328 AIKIVASLTNGNEQLTNM 345 (391)
T ss_pred HHHHHHHHhcCHHHHHHH
Confidence 999999999865443333
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.2e-07 Score=104.95 Aligned_cols=69 Identities=19% Similarity=0.280 Sum_probs=56.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cccc-eeEccCCcccccCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IEGL-TYAGNHGLEIIHPD 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~~~-~~ig~hGaei~~~g 114 (1460)
++|+|+||||++ ....+++.++++|++|+++ |+++++||||+...+..... +... .++++||+.+...+
T Consensus 3 ~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~-g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 3 LVAIDIDGTLTE-----PNRMISERAIEAIRKAEKK-GIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred EEEEecCCCcCC-----CCcccCHHHHHHHHHHHHC-CCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 789999999996 2346999999999999999 99999999999888766543 2222 47899999998754
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-07 Score=104.30 Aligned_cols=68 Identities=19% Similarity=0.291 Sum_probs=55.6
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cc-cceeEccCCcccccCC
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IE-GLTYAGNHGLEIIHPD 114 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~-~~~~ig~hGaei~~~g 114 (1460)
+|||+||||++ +...++++++++|++|+++ |+.+++||||++..+.+... +. ...+++.||+.+...+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESV-GIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 58999999996 2346899999999999999 99999999999888766543 22 2357899999988755
|
catalyze the same reaction as SPP. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.2e-07 Score=104.25 Aligned_cols=84 Identities=20% Similarity=0.222 Sum_probs=64.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCC---
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPD--- 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g--- 114 (1460)
++|||+||||+.. . .++++++++|++|+++ |+.++++|||+...+...+.--+ ..+++.||+.+..++
T Consensus 1 li~~DlDGTLl~~-~-----~~~~~~~~ai~~l~~~-G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~ 73 (225)
T TIGR02461 1 VIFTDLDGTLLPP-G-----YEPGPAREALEELKDL-GFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYF 73 (225)
T ss_pred CEEEeCCCCCcCC-C-----CCchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccc
Confidence 4899999999972 1 2566899999999999 99999999999888766553222 258899999998742
Q ss_pred ------------CCccccCCCccchhhh
Q psy775 115 ------------GSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 115 ------------~~i~~~pI~ee~vdeL 130 (1460)
..++..+++.+.+..+
T Consensus 74 ~~~~~~~~~~~~~~i~~~~l~~~~~~~i 101 (225)
T TIGR02461 74 PFPVGAGREVGNYEVIELGKPVAKIRAA 101 (225)
T ss_pred cccccccccCCCeEEEEcCCCHHHHHHH
Confidence 3467788888766554
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1387|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.8e-06 Score=95.17 Aligned_cols=303 Identities=14% Similarity=0.199 Sum_probs=183.8
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEE--eCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc
Q psy775 177 CAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWI--HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD 254 (1460)
Q Consensus 177 ~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwI--HDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e 254 (1460)
+...|..+.-.-|+.+..|... +...+ . +.| ||| ..|-+. .|. +|+ +. +.+||-..|-|--|.|
T Consensus 122 ea~~~~hfTllgQaigsmIl~~-Eai~r----~-~Pd-i~IDtMGY~fs-~p~-~r~-l~----~~~V~aYvHYP~iS~D 187 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMILAF-EAIIR----F-PPD-IFIDTMGYPFS-YPI-FRR-LR----RIPVVAYVHYPTISTD 187 (465)
T ss_pred ecccccceehHHHHHHHHHHHH-HHHHh----C-Cch-heEecCCCcch-hHH-HHH-Hc----cCceEEEEecccccHH
Confidence 3456777777777777766532 11111 1 344 788 566643 232 222 21 5799999998888877
Q ss_pred ccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCce---------ecCCCcEEEECCeEEEEEEeecccCchh
Q psy775 255 IFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR---------VDRKNLLVEHGGRTVRIRPLPIAIPYER 325 (1460)
Q Consensus 255 ifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~---------~~~~~~~i~~~Gr~vkV~viPiGID~~~ 325 (1460)
+...+-.|+.= |+| ..----|-|-|..--.. .|.. ...+.+..-|+.+. ++++..-.+++.
T Consensus 188 ML~~l~qrq~s--~~l-----~~~KlaY~rlFa~lY~~-~G~~ad~vm~NssWT~nHI~qiW~~~~--~~iVyPPC~~e~ 257 (465)
T KOG1387|consen 188 MLKKLFQRQKS--GIL-----VWGKLAYWRLFALLYQS-AGSKADIVMTNSSWTNNHIKQIWQSNT--CSIVYPPCSTED 257 (465)
T ss_pred HHHHHHhhhhc--chh-----hhHHHHHHHHHHHHHHh-ccccceEEEecchhhHHHHHHHhhccc--eeEEcCCCCHHH
Confidence 77665443321 111 11122344555332111 1221 11222222243333 334444455555
Q ss_pred hhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCC--CCCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Q psy775 326 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE--HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 403 (1460)
Q Consensus 326 f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~--~~~kvvLvqig~psr~~~~ey~~L~~ev~~l 403 (1460)
+...... .+.....+|++|..-|.|+.. .|+-|+-++.++|. ....+.|+.+| ..|+.. ++ +.-+.+..+
T Consensus 258 lks~~~t----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D~-ervk~Lkd~ 329 (465)
T KOG1387|consen 258 LKSKFGT----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-DE-ERVKSLKDL 329 (465)
T ss_pred HHHHhcc----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-hH-HHHHHHHHH
Confidence 5443222 113456899999999999999 88888889999998 33456666555 333322 22 233444555
Q ss_pred HHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch-hccc
Q psy775 404 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG-EQMH 482 (1460)
Q Consensus 404 v~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa-~~L~ 482 (1460)
+.+++.. .-+-|.-++|.++|..+|.-|-+.+-+-..|-||+.+.||||+ |..+|+-..+|-. +.+.
T Consensus 330 a~~L~i~-------~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 330 AEELKIP-------KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVT 397 (465)
T ss_pred HHhcCCc-------cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeee
Confidence 5565543 1245568999999999999999999999999999999999998 3344444433322 1221
Q ss_pred ---c---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 483 ---E---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 483 ---~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
| |.+. | +.+|-|++|.+++.+..++|-...+..+..+.+++
T Consensus 398 ~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFs 444 (465)
T KOG1387|consen 398 PWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFG 444 (465)
T ss_pred ccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 1 6665 4 56789999999999999987776666677776665
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.2e-07 Score=114.20 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=56.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCCC
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g~ 115 (1460)
+-++|+|+||||++.. ..+++.+++||++|+++ |+.+++||||+...+......-+ ..+++.||+.+..+++
T Consensus 416 ~KLIfsDLDGTLLd~d-----~~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 416 KKIVYTDLDGTLLNPL-----TYSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred eeEEEEECcCCCcCCC-----CccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 3489999999999732 24667899999999999 99999999999888765553211 3588999999986543
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.6e-07 Score=104.06 Aligned_cols=85 Identities=21% Similarity=0.183 Sum_probs=62.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCCCC-
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPDGS- 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g~~- 116 (1460)
++|+|+||||+.-. ...++.++++|++|+++ |+.+++||||++..+...+.--+ ..++|+||+.+...++.
T Consensus 1 li~~DlDGTll~~~-----~~~~~~~~~~i~~l~~~-g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 74 (256)
T TIGR01486 1 WIFTDLDGTLLDPH-----GYDWGPAKEVLERLQEL-GIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWF 74 (256)
T ss_pred CEEEcCCCCCcCCC-----CcCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcc
Confidence 47999999999632 21344699999999999 99999999999888776653222 36889999999876542
Q ss_pred ------ccccCCCccchhhh
Q psy775 117 ------RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 ------i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 75 ~~~~~~~~~~~i~~~~~~~i 94 (256)
T TIGR01486 75 TEPEYPVIALGIPYEKIRAR 94 (256)
T ss_pred cCCCeEEEEcCCCHHHHHHH
Confidence 34566776544444
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.9e-05 Score=92.84 Aligned_cols=164 Identities=14% Similarity=0.188 Sum_probs=95.8
Q ss_pred CCCEEEEEEcCccccCCHHHHH-HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL-~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.++++|+.+++....|+....+ .|++.+. + ++ +.++.++.+ + +.+++++ .+.+. +
T Consensus 179 ~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G~--g---~~~~l~~----~~~~~----~----- 234 (350)
T cd03785 179 PGKPTLLVFGGSQGARAINEAVPEALAELL-R-KR----LQVIHQTGK--G---DLEEVKK----AYEEL----G----- 234 (350)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhh-c-cC----eEEEEEcCC--c---cHHHHHH----HHhcc----C-----
Confidence 5677888888888888887655 6776653 2 32 333322222 1 2223333 33222 1
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+-+.+.|.+ +++..+|+.||+++.+| | +.+..|||+| +.|+|++...|...- .++...+.+.+
T Consensus 235 ~~v~~~g~~--~~~~~~l~~ad~~v~~s---g-~~t~~Eam~~-----G~Pvv~~~~~~~~~~------~~~~~~~~l~~ 297 (350)
T cd03785 235 VNYEVFPFI--DDMAAAYAAADLVISRA---G-ASTVAELAAL-----GLPAILIPLPYAADD------HQTANARALVK 297 (350)
T ss_pred CCeEEeehh--hhHHHHHHhcCEEEECC---C-HhHHHHHHHh-----CCCEEEeecCCCCCC------cHHHhHHHHHh
Confidence 114566665 78999999999999876 3 4789999999 678888776542110 00000011111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY--EIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~--d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
...+++++|. |.++++++|...++.+...++.+.+ .++
T Consensus 298 ---------------------------------------~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~-~~~ 337 (350)
T cd03785 298 ---------------------------------------AGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEA-ARS 337 (350)
T ss_pred ---------------------------------------CCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHH-HHh
Confidence 1235788887 9999999999999754433333333 355
Q ss_pred HHHhcCHH
Q psy775 976 REKVHDVN 983 (1460)
Q Consensus 976 ~v~~~~~~ 983 (1460)
++..+...
T Consensus 338 ~~~~~~~~ 345 (350)
T cd03785 338 LARPDAAE 345 (350)
T ss_pred cCCCCHHH
Confidence 55544433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.2e-07 Score=89.73 Aligned_cols=99 Identities=27% Similarity=0.362 Sum_probs=68.7
Q ss_pred EEEEEEcCccccCCHHHHHH-HHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 742 KIVLGVDRLDYTKGLVHRLK-AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 742 kiIl~VdRLd~~KGi~~kL~-Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
.+|++.|++.+.||+...++ |++++.+++|+ +.|+.+|... + ++.++ +. +-+
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~~-----~------~l~~~----~~--------~~v 55 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNGP-----D------ELKRL----RR--------PNV 55 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECESS------------HHCCH----HH--------CTE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCCH-----H------HHHHh----cC--------CCE
Confidence 46889999999999999999 99999999996 5666666532 1 12222 11 115
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
.+.|.+ +|+.++++.||+++.|+. .+|++...+|||++ +.|+|+|..
T Consensus 56 ~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-----G~pvi~~~~ 103 (135)
T PF13692_consen 56 RFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-----GKPVIASDN 103 (135)
T ss_dssp EEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-----T--EEEEHH
T ss_pred EEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-----CCCEEECCc
Confidence 567777 689999999999999984 78999999999999 778899887
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.35 E-value=3e-05 Score=91.81 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=70.6
Q ss_pred CCCEEEEEEcCccc---cCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDY---TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~---~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++.+++..+|... .||+...++|++++.++ + +.++..+.+ + .++++++.+.+.+..
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~~-----~----~~~~l~~~~~~~~~~----- 256 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNHP-----R----TRPRIREAGLEFLGH----- 256 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECCC-----C----hHHHHHHHHHhhccC-----
Confidence 34567888999875 79999999999987443 2 333322221 1 223444444444320
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
.+.+.+.+....+++..+|+.||++|.+|- | +..|+++| +.|+|++...
T Consensus 257 -~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~-----g~PvI~~~~~ 305 (363)
T cd03786 257 -HPNVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFL-----GVPVLNLRDR 305 (363)
T ss_pred -CCCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhc-----CCCEEeeCCC
Confidence 112456667778899999999999999994 4 46899998 6778887643
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.4e-07 Score=103.73 Aligned_cols=69 Identities=20% Similarity=0.224 Sum_probs=55.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPD 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g 114 (1460)
++|+|+||||++- ...+++.++++|++|+++ |+.++|||||+...+...+...+ ..+++.||+.+..++
T Consensus 6 li~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~-Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 6 LVFTDLDGTLLDH-----HTYSYEPAKPALKALKEK-GIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPK 76 (273)
T ss_pred EEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecc
Confidence 7999999999962 235778899999999999 99999999999888766553222 247899999997643
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=7e-05 Score=89.82 Aligned_cols=168 Identities=8% Similarity=0.085 Sum_probs=103.9
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+.+++..|++...||+...++++. +.|+ +.++.++.. +. .+++++++++++.+ .. +
T Consensus 203 ~~il~~~G~~~~~k~~~~li~~l~----~~~~----~~~viv~G~---~~----~~~~~l~~~~~~~~--------~~-v 258 (380)
T PRK13609 203 KILLIMAGAHGVLGNVKELCQSLM----SVPD----LQVVVVCGK---NE----ALKQSLEDLQETNP--------DA-L 258 (380)
T ss_pred cEEEEEcCCCCCCcCHHHHHHHHh----hCCC----cEEEEEeCC---CH----HHHHHHHHHHhcCC--------Cc-E
Confidence 345666799999999998888864 2354 345555432 11 23455555544322 12 4
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CCCcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.++ ++..+|+.||+++. ++.+++..|||+| +.|+|++. ..|... +.++
T Consensus 259 ~~~g~~~--~~~~l~~~aD~~v~----~~gg~t~~EA~a~-----g~PvI~~~~~~g~~~--------------~n~~-- 311 (380)
T PRK13609 259 KVFGYVE--NIDELFRVTSCMIT----KPGGITLSEAAAL-----GVPVILYKPVPGQEK--------------ENAM-- 311 (380)
T ss_pred EEEechh--hHHHHHHhccEEEe----CCCchHHHHHHHh-----CCCEEECCCCCCcch--------------HHHH--
Confidence 4557763 57899999999874 3458899999999 67888875 344111 0000
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
++ +- .| ..+.+.|+++++++|.+.++.+...++.+ +..+++...
T Consensus 312 -------------~~--------------~~-------~G-~~~~~~~~~~l~~~i~~ll~~~~~~~~m~-~~~~~~~~~ 355 (380)
T PRK13609 312 -------------YF--------------ER-------KG-AAVVIRDDEEVFAKTEALLQDDMKLLQMK-EAMKSLYLP 355 (380)
T ss_pred -------------HH--------------Hh-------CC-cEEEECCHHHHHHHHHHHHCCHHHHHHHH-HHHHHhCCC
Confidence 00 00 11 22335699999999999998755443433 344566667
Q ss_pred cCHHHHHHHHHHHHhh
Q psy775 980 HDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 980 ~~~~~W~~~~l~~l~~ 995 (1460)
++.+..++.+++.+..
T Consensus 356 ~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 356 EPADHIVDDILAENHV 371 (380)
T ss_pred chHHHHHHHHHHhhhh
Confidence 7888888877766543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.6e-07 Score=98.87 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=53.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cccceeEccCCcccccC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IEGLTYAGNHGLEIIHP 113 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~~~~~ig~hGaei~~~ 113 (1460)
++|+|+||||+.- + ..+++.++++|++|+++ |+++++||||+...+...+. +....++|+||+.+...
T Consensus 1 ~i~~DlDGTLL~~----~-~~~~~~~~~~l~~l~~~-gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDS----H-SYDWQPAAPWLTRLQEA-GIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCC----C-CCCcHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 4799999999962 2 23445599999999999 99999999999888766553 33235899999999764
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.3e-05 Score=92.90 Aligned_cols=218 Identities=14% Similarity=0.012 Sum_probs=121.8
Q ss_pred CCCCEEEEeCcchhH--HHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHHHhhhccCceeeeccHHhHHHH
Q psy775 210 SGTPLVWIHDYHLML--AANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 210 ~~gDvVwIHDYhL~l--lP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
.+||+|.+|-.-+.. ++..+-.++. ..++++.+++|-=+|.. +.... .+.....-+-.||.|..++......+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k--~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~~~l 138 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLK--KKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMKDRL 138 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHH--HcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHHHHH
Confidence 368999998754432 3333322232 12689999999766532 11111 12333444446888888887665555
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
.+. |. ...++.+.++..+...... .....+++.|+|+||+....++.
T Consensus 139 ~~~-----g~-------------~~~~i~~~~~~~~~~~~~~------~~~~~~~~~i~yaG~l~k~~~l~--------- 185 (333)
T PRK09814 139 VEE-----GL-------------TTDKIIVQGIFDYLNDIEL------VKTPSFQKKINFAGNLEKSPFLK--------- 185 (333)
T ss_pred HHc-----CC-------------CcCceEecccccccccccc------cccccCCceEEEecChhhchHHH---------
Confidence 431 21 1112223333222211100 00013456899999999433211
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
+..|+ +.|+++|.+. +.. .. ... +.+.|.++.+|+..+|+. |+.+++.-
T Consensus 186 -~~~~~----~~l~i~G~g~-----~~~-----------~~--------~~~-V~f~G~~~~eel~~~l~~-~~gLv~~~ 234 (333)
T PRK09814 186 -NWSQG----IKLTVFGPNP-----EDL-----------EN--------SAN-ISYKGWFDPEELPNELSK-GFGLVWDG 234 (333)
T ss_pred -hcCCC----CeEEEECCCc-----ccc-----------cc--------CCC-eEEecCCCHHHHHHHHhc-CcCeEEcC
Confidence 12444 3455555332 110 00 112 445699999999999987 66665431
Q ss_pred C-----------CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHH
Q psy775 447 R-----------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRA 502 (1460)
Q Consensus 447 r-----------EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~a 502 (1460)
- -.+.--..||||| |.|+|++..++.++.+.+ |++|+ +.++++++|...
T Consensus 235 ~~~~~~~~~y~~~~~P~K~~~ymA~-----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~ 297 (333)
T PRK09814 235 DTNDGEYGEYYKYNNPHKLSLYLAA-----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI 297 (333)
T ss_pred CCCCccchhhhhccchHHHHHHHHC-----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc
Confidence 1 1122225678999 677899999888888843 88887 678999999874
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.2e-06 Score=97.22 Aligned_cols=172 Identities=17% Similarity=0.152 Sum_probs=108.0
Q ss_pred CCCEEEEEEcCccccCCHHHHH-HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL-~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.+.++|+.++|....|++...+ +|++++.+ .| .+++++|.+. .++++++ .+ . + .+
T Consensus 181 ~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~-~~-----~~~~~~G~g~------~~~~~~~----~~-~----~---~~ 236 (357)
T PRK00726 181 EGKPTLLVVGGSQGARVLNEAVPEALALLPE-AL-----QVIHQTGKGD------LEEVRAA----YA-A----G---IN 236 (357)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhhh-Cc-----EEEEEcCCCc------HHHHHHH----hh-c----C---Cc
Confidence 4677889999999999987777 88887643 33 2455555432 1122221 11 1 1 12
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+.+.|.+ ++...+|..||+++.+| | +.+.+|||+| +.|+|++...|... .+....++
T Consensus 237 --v~~~g~~--~~~~~~~~~~d~~i~~~---g-~~~~~Ea~~~-----g~Pvv~~~~~~~~~----------~~~~~~~~ 293 (357)
T PRK00726 237 --AEVVPFI--DDMAAAYAAADLVICRA---G-ASTVAELAAA-----GLPAILVPLPHAAD----------DHQTANAR 293 (357)
T ss_pred --EEEeehH--hhHHHHHHhCCEEEECC---C-HHHHHHHHHh-----CCCEEEecCCCCCc----------CcHHHHHH
Confidence 4456665 68899999999999877 3 5788999999 67888887654221 00000111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE--IDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d--~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
.+. ....+++++|.| +++++++|.++++++...++.+.+ .++
T Consensus 294 ~i~-----------------------------------~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~-~~~ 337 (357)
T PRK00726 294 ALV-----------------------------------DAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEA-ARA 337 (357)
T ss_pred HHH-----------------------------------HCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHH-HHh
Confidence 110 012346788877 999999999999985554444444 366
Q ss_pred HHHhcCHHHHHHHHHHHH
Q psy775 976 REKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l~~l 993 (1460)
+....+...-++.+++.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 338 LGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCcCHHHHHHHHHHHHh
Confidence 666677777776666544
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.5e-05 Score=94.90 Aligned_cols=261 Identities=12% Similarity=0.084 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEE--EeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccC
Q psy775 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVW--IHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF 259 (1460)
Q Consensus 182 ~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVw--IHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~L 259 (1460)
..|...+..+++.+.+.++.. ..++|++. ++.-|... +....| ..++.+..|+ ...
T Consensus 201 ~~f~~~~eLi~efl~~l~~~~------~~~~d~~Iva~Dr~~~~~----~~~~~~----~~~~~ls~f~---~~~----- 258 (519)
T TIGR03713 201 LEYSNMDELIREKFQRYLKVE------VKDDDEIIVASDDRHNFL----VADTFP----AKNLIFSLFS---ERN----- 258 (519)
T ss_pred EEECCHHHHHHHHHHHHHHhh------CCCCCEEEEEcCchhhhh----HhhcCc----cceEEEEecc---Ccc-----
Confidence 345566667777665543311 12578777 67667665 333222 2225556776 111
Q ss_pred CC--cHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh
Q psy775 260 PW--SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 337 (1460)
Q Consensus 260 P~--r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~ 337 (1460)
|. -+..+..+..+|.+-..|.+=.+........ .. ...+|..+|.+.- .......+ +
T Consensus 259 ~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~~~~--------------~~-~~~~v~~Ip~~~~-~~~~~~s~-----r 317 (519)
T TIGR03713 259 RHHTYLDLYESLSRADLIIVDREDIERLLEENYRE--------------NY-VEFDISRITPFDT-RLRLGQSQ-----Q 317 (519)
T ss_pred cccchhhhhhChhhcCeEEEcCHHHHHHHHHHhhh--------------cc-cCCcceeeCccce-EEecChhh-----c
Confidence 22 2567777777887776564333222211000 00 1123444554433 11111100 1
Q ss_pred ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCC--
Q psy775 338 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN-- 415 (1460)
Q Consensus 338 ~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~-- 415 (1460)
..++.|.+++||| +.|-+..+|+|+.++.+++|+.. |...|..+. . ++.+.+.+++.++|..++...
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~~---~---~~~~~l~~~i~~~~~~~~~~~~~ 386 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNND---N---DITQLLEDILEQINEEYNQDKNF 386 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecCc---h---hHHHHHHHHHHHHHhhhchhhhc
Confidence 1445566677799 99999999999999999999863 444553321 1 223444455555544421100
Q ss_pred --------------------cccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCC
Q psy775 416 --------------------WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 475 (1460)
Q Consensus 416 --------------------~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~a 475 (1460)
-...+.|.|..+..++.+.|..|.++|.+|..|||+ .-+|||+. |-|.| .-
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI---ny 457 (519)
T TIGR03713 387 FSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI---NK 457 (519)
T ss_pred cccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee---ec
Confidence 003566778888889999999999999999999999 99999987 33444 44
Q ss_pred Cchhccc---ccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 476 GAGEQMH---EALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 476 Gaa~~L~---~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
|.++.+. .|.+| .|.+++++||...|..+.
T Consensus 458 g~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 458 VETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred CCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 6666664 38999 699999999999999654
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.2e-06 Score=93.16 Aligned_cols=71 Identities=10% Similarity=0.034 Sum_probs=52.0
Q ss_pred EEEEecCCCcCCCCC------CCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhh---hhh-c-------ccccee
Q psy775 40 ALLLDYDGTLAPIAP------HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM---EMV-G-------IEGLTY 102 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~---~~l-~-------~~~~~~ 102 (1460)
++++||||||+.... .-....+++++.+++++++++ |++++++|||+...+. +.+ . ++...+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 489999999996321 000147899999999999999 9999999999977653 222 1 222356
Q ss_pred EccCCcccc
Q psy775 103 AGNHGLEII 111 (1460)
Q Consensus 103 ig~hGaei~ 111 (1460)
++++|+.+.
T Consensus 80 i~~~g~~~~ 88 (157)
T smart00775 80 LLSPDRLFA 88 (157)
T ss_pred EEcCCcchh
Confidence 788888775
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.9e-05 Score=98.68 Aligned_cols=148 Identities=13% Similarity=0.114 Sum_probs=103.4
Q ss_pred CCeEEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 340 ~~kvIL~VgRLd~~KGI~~lL~Af~~lL~--~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
+..++.+|.|+...||...++.+++++++ ++|+. .+.+|..|.+...+.. -.++.+.+..++.+ ..|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC----C
Confidence 34588899999999999999999999986 55552 4667777755444321 13445555555432 0021 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEE-ccC-CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc---cccEEECC---
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALV-TPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM---HEALICNP--- 489 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~Vv-pSl-rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L---~~allVNP--- 489 (1460)
.|+++.+ .+.+--..+|.+||+++. ||. +|.-|+.=.=||. .|.|-.|-.-|...+. ..|..+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~------nGgL~~sv~DG~~~E~~~~~nGf~f~~~~~ 531 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAM------NGVLNLSILDGWWGEGYDGDNGWAIGDGEE 531 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHH------cCCceeecccCcccccCCCCcEEEECCCcc
Confidence 3555544 333333357999999999 888 9999998877776 3777888887776654 23888885
Q ss_pred ---------CCHHHHHHHHHHHc
Q psy775 490 ---------YEIDAAAEVIHRAL 503 (1460)
Q Consensus 490 ---------~D~~elA~AI~~aL 503 (1460)
.|.+++-++|.+++
T Consensus 532 ~~~~~~~d~~da~~l~~~L~~ai 554 (601)
T TIGR02094 532 YDDEEEQDRLDAEALYDLLENEV 554 (601)
T ss_pred ccccccccCCCHHHHHHHHHHHH
Confidence 89999999998877
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.6e-05 Score=93.45 Aligned_cols=167 Identities=17% Similarity=0.216 Sum_probs=100.7
Q ss_pred CCCEEEEEEcCccccCCHHHHH-HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL-~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.++++|++++|....|++...+ .|++++.++ ++ .++.++ +. + + . +++++.+.+.+ ..
T Consensus 177 ~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~-g~-~--~-~----~~l~~~~~~~~-------l~ 234 (348)
T TIGR01133 177 EGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQT-GK-N--D-L----EKVKNVYQELG-------IE 234 (348)
T ss_pred CCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEEC-Cc-c--h-H----HHHHHHHhhCC-------ce
Confidence 4677899999988888876654 788776443 22 222222 21 1 1 1 23444443322 12
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
.++.+. .. ++..+|+.||++|.+| | +.+.+|||+| +.|+|++...|..... ..|+
T Consensus 235 ~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~-----g~Pvv~~~~~~~~~~~----~~~~-------- 289 (348)
T TIGR01133 235 AIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAA-----GVPAILIPYPYAADDQ----YYNA-------- 289 (348)
T ss_pred EEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHc-----CCCEEEeeCCCCccch----hhHH--------
Confidence 233333 22 7889999999999865 4 6799999999 6788988776543200 0000
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE--IDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d--~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
+++ . ....+++++|.| +++++++|.+.++.+...+++ .+..++
T Consensus 290 --------------~~i------------~--------~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~-~~~~~~ 334 (348)
T TIGR01133 290 --------------KFL------------E--------DLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAM-AEAARK 334 (348)
T ss_pred --------------HHH------------H--------HCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHH-HHHHHh
Confidence 111 0 012457788876 999999999999765443333 344466
Q ss_pred HHHhcCHHHHHH
Q psy775 976 REKVHDVNYWMR 987 (1460)
Q Consensus 976 ~v~~~~~~~W~~ 987 (1460)
++..+...++++
T Consensus 335 ~~~~~~~~~i~~ 346 (348)
T TIGR01133 335 LAKPDAAKRIAE 346 (348)
T ss_pred cCCccHHHHHHh
Confidence 666666666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.5e-06 Score=98.38 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=57.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~g~ 115 (1460)
++|+|+||||++.. ..+++.++++|++|+++ |+.|++||||+...+.... ++.. .+|+.||+.+..+..
T Consensus 3 LIftDLDGTLLd~~-----~~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~~-p~I~eNGA~I~~p~~ 74 (302)
T PRK12702 3 LVLSSLDGSLLDLE-----FNSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLEH-PFICEDGSAIYVPEH 74 (302)
T ss_pred EEEEeCCCCCcCCC-----CcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCC-eEEEeCCcEEEEccc
Confidence 79999999999842 34788899999999999 9999999999988865544 4433 688999999987754
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0001 Score=87.99 Aligned_cols=103 Identities=14% Similarity=0.120 Sum_probs=68.6
Q ss_pred CEEEEEEcCcc-ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 741 QKIVLGVDRLD-YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 741 kkiIl~VdRLd-~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
..+++...|.. ..||+...++|+.++.+++|++ .++.++.|. . ..+.+ +.+.++. .+-
T Consensus 198 ~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~----~~vi~~~~~-~------~~~~~---~~~~~~~-------~~~ 256 (365)
T TIGR00236 198 RYILLTLHRRENVGEPLENIFKAIREIVEEFEDV----QIVYPVHLN-P------VVREP---LHKHLGD-------SKR 256 (365)
T ss_pred CEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCC----EEEEECCCC-h------HHHHH---HHHHhCC-------CCC
Confidence 34555555653 4589999999999999888875 344333332 1 11222 2222221 112
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
+.+.+.++..++..+|+.||+++.+| |.+..||++| +.|+|.+..
T Consensus 257 v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~-----g~PvI~~~~ 301 (365)
T TIGR00236 257 VHLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSL-----GKPVLVLRD 301 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHc-----CCCEEECCC
Confidence 56678899999999999999999888 4457999999 678888643
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.1e-06 Score=88.77 Aligned_cols=109 Identities=27% Similarity=0.376 Sum_probs=79.9
Q ss_pred EEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC
Q psy775 746 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 825 (1460)
Q Consensus 746 ~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~ 825 (1460)
++||+.+.||+...++|+.++.+++|+ +.++.+|..... . . ...+..+. +...-+.+.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~~~--~----~---~~~~~~~~-------~~~~~v~~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGPER--E----Y---LEELLAAL-------LLLDRVIFLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCCCh--H----H---HHHHHHhc-------CCcccEEEeCC
Confidence 999999999999999999999888876 467767754321 1 1 11111111 11122445566
Q ss_pred C-CHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 826 I-SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 826 v-~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+ +.+++..+++.||+++.||..||++...+|||+| +.|+|+|+.+|..+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-----g~pvi~s~~~~~~e 218 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-----GLPVIATDVGGPPE 218 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-----CCCEEEcCCCCcce
Confidence 6 4566666666799999999999999999999999 78999999988766
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.6e-05 Score=94.38 Aligned_cols=169 Identities=14% Similarity=0.166 Sum_probs=103.5
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
..++++.||+...||+...++++ ++..|++ .++.++.. + + ++.+++.+. .+.. .. +
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~----~~vvv~G~---~-~---~l~~~l~~~---~~~~------~~-v 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANA----QVVMICGK---S-K---ELKRSLTAK---FKSN------EN-V 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCc----eEEEEcCC---C-H---HHHHHHHHH---hccC------CC-e
Confidence 45667899999999999999885 4455553 45444422 1 1 222333322 2211 11 4
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
.+.|.+ +++..+|+.||+++.. +.+++..||||| +.|+|++...+..+ ...+.
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-----G~PvI~~~~~pgqe---------------~~N~~- 311 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLAR-----CIPMIFLNPAPGQE---------------LENAL- 311 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHh-----CCCEEECCCCCCcc---------------hhHHH-
Confidence 456665 5789999999999863 357899999999 67888875322111 00000
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
|+ +-.| .++. +.|.++++++|.+.++.+...++++ +..++....+
T Consensus 312 ------------~~--------------~~~G------~g~~--~~~~~~l~~~i~~ll~~~~~~~~m~-~~~~~~~~~~ 356 (391)
T PRK13608 312 ------------YF--------------EEKG------FGKI--ADTPEEAIKIVASLTNGNEQLTNMI-STMEQDKIKY 356 (391)
T ss_pred ------------HH--------------HhCC------cEEE--eCCHHHHHHHHHHHhcCHHHHHHHH-HHHHHhcCCC
Confidence 00 0011 2233 4599999999999998765444444 4446666777
Q ss_pred CHHHHHHHHHHHHhh
Q psy775 981 DVNYWMRSFLKGMGT 995 (1460)
Q Consensus 981 ~~~~W~~~~l~~l~~ 995 (1460)
+....++.+++.+..
T Consensus 357 s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 357 ATQTICRDLLDLIGH 371 (391)
T ss_pred CHHHHHHHHHHHhhh
Confidence 777777777766544
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.04 E-value=8e-05 Score=93.45 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=111.6
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC-C-
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN-W- 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~-~- 816 (1460)
.++.|.+++||| +.|-+...++|+.++++++|+. .|...|-++. . ++.+.++++++++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~----~L~~~gy~~~---~---~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDY----ELKILTYNND---N---DITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCe----EEEEEEecCc---h---hHHHHHHHHHHHHHhhhchhhhcc
Confidence 457777788899 9999999999999999999985 4555555421 1 235566677777766532110 0
Q ss_pred --------------------ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 817 --------------------SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 817 --------------------~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
.-.+.|.|..+.+++...|.-|.++|.+|..|||+ .-+|||+. |-|.| --|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI---nyg 458 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI---NKV 458 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee---ecC
Confidence 03577778888889999999999999999999999 99999987 44555 222
Q ss_pred cchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHH
Q psy775 877 AGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIH 956 (1460)
Q Consensus 877 ~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~ 956 (1460)
.++ +|.+. .+|++| .|.++++++|.
T Consensus 459 ~~~---------------------------------------------~V~d~--------~NG~li--~d~~~l~~al~ 483 (519)
T TIGR03713 459 ETD---------------------------------------------YVEHN--------KNGYII--DDISELLKALD 483 (519)
T ss_pred Cce---------------------------------------------eeEcC--------CCcEEe--CCHHHHHHHHH
Confidence 222 33333 345777 69999999999
Q ss_pred HHhCCCHHH
Q psy775 957 RALTMPEDE 965 (1460)
Q Consensus 957 ~aL~m~~~e 965 (1460)
..|..+...
T Consensus 484 ~~L~~~~~w 492 (519)
T TIGR03713 484 YYLDNLKNW 492 (519)
T ss_pred HHHhCHHHH
Confidence 999976443
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.3e-06 Score=93.62 Aligned_cols=74 Identities=20% Similarity=0.160 Sum_probs=59.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccc-cceeEccCCcccccC
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIE-GLTYAGNHGLEIIHP 113 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~-~~~~ig~hGaei~~~ 113 (1460)
+.++|.|+||||+++.+ .+..++|.+.+++++++++ |+.+++||||++..+.... ++. ...+++.||+.+..+
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~-gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~ 77 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGE-DSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYG 77 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhcc-CceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeC
Confidence 46899999999998643 2356889999999999999 9999999999988887764 332 223678999999875
Q ss_pred C
Q psy775 114 D 114 (1460)
Q Consensus 114 g 114 (1460)
+
T Consensus 78 ~ 78 (249)
T TIGR01485 78 G 78 (249)
T ss_pred C
Confidence 4
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00028 Score=85.51 Aligned_cols=135 Identities=15% Similarity=0.075 Sum_probs=80.6
Q ss_pred cCCeEEE--EecCccc-cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCC
Q psy775 339 TKQKIVL--GVDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 415 (1460)
Q Consensus 339 ~~~kvIL--~VgRLd~-~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~ 415 (1460)
.++++|+ +.+|..+ .|+++.+++|++++.+++|+++ ++..+.+. ...+ .++++..+.+. +
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~-~~~~-------~~~~~~~~~~~-----~ 251 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF-KRRL-------QFEQIKAEYGP-----D 251 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc-hhHH-------HHHHHHHHhCC-----C
Confidence 3556554 3459888 7999999999999999888753 33333221 1111 12222222111 1
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC-----------------CCCch
Q psy775 416 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-----------------FAGAG 478 (1460)
Q Consensus 416 ~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe-----------------~aGaa 478 (1460)
..+..+.+ +...+|++||++|.+| |.+.+|+|+|+. |+|++- +.+.+
T Consensus 252 -~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-----P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ 315 (385)
T TIGR00215 252 -LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-----PMVVGYRMKPLTFLIARRLVKTDYISLP 315 (385)
T ss_pred -CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-----CEEEEEcCCHHHHHHHHHHHcCCeeecc
Confidence 12444423 3456899999999999 667779999954 446651 12222
Q ss_pred hcccc-c----EEECCCCHHHHHHHHHHHcCCC
Q psy775 479 EQMHE-A----LICNPYEIDAAAEVIHRALTMP 506 (1460)
Q Consensus 479 ~~L~~-a----llVNP~D~~elA~AI~~aL~m~ 506 (1460)
..+.+ + ++=+-.+++.+++++.+.|+++
T Consensus 316 nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 316 NILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 22222 1 1112246789999999999877
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.4e-06 Score=92.68 Aligned_cols=66 Identities=23% Similarity=0.192 Sum_probs=50.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cc-cceeEccCCcccccC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IE-GLTYAGNHGLEIIHP 113 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~-~~~~ig~hGaei~~~ 113 (1460)
++++|+||||++ ++..+++-+ ++++ ++++ |+.++++|||++..+.+.+. +. ...++|+||+++...
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~-gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~ 70 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGD-AVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYG 70 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCC-CceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeC
Confidence 478999999997 234566655 7776 6777 99999999999999988763 22 234789999998653
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00037 Score=88.79 Aligned_cols=125 Identities=15% Similarity=0.111 Sum_probs=82.9
Q ss_pred CCCCEEEEEEcCccccCCHHHHHHHHHHHHH--hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 738 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 738 ~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~--~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++..++..|.|+..-||..+.+.+.+++++ ++|+ ..+.+|..|.+...+.. -.++.+.+..++.+ -.|..
T Consensus 386 dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~~-- 458 (601)
T TIGR02094 386 DPDVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFRG-- 458 (601)
T ss_pred CCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCCC--
Confidence 4567789999999999999999999999986 6665 35778877776544321 12444555555442 00211
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEE-CCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALV-TPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vv-tSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
.|+++. ..+.+-=--+|..||+++. ||. .|.-|+.=+=||. .|.|-+|-.-|..
T Consensus 459 --kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~------nGgL~~sv~DG~~ 514 (601)
T TIGR02094 459 --RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAM------NGVLNLSILDGWW 514 (601)
T ss_pred --CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHH------cCCceeecccCcc
Confidence 244444 4444444457999999999 666 8888887777765 3555666655543
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00026 Score=84.69 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=64.6
Q ss_pred CCCEE-EEEE-cCccccCC-HHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKI-VLGV-DRLDYTKG-LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kki-Il~V-dRLd~~KG-i~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++ ++.. .|....|+ +...++|++.+.+++|++ .++.++.+ .+ .++++++++.+.. +
T Consensus 184 ~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~~----~~----~~~~~~~~~~~~~---~--- 245 (380)
T PRK00025 184 PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLVN----PK----RREQIEEALAEYA---G--- 245 (380)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecCC----hh----hHHHHHHHHhhcC---C---
Confidence 34444 3433 46666554 688899999998888864 44444421 11 2233444433220 1
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
.. +.++. .++..+|+.||+++.+| |.+.+|+|+| +.|+|++...
T Consensus 246 ~~-v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-----G~PvI~~~~~ 289 (380)
T PRK00025 246 LE-VTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL-----KVPMVVGYKV 289 (380)
T ss_pred CC-eEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh-----CCCEEEEEcc
Confidence 11 33332 37899999999999998 6788899999 6788887543
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00022 Score=88.83 Aligned_cols=118 Identities=16% Similarity=0.203 Sum_probs=67.3
Q ss_pred HHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcc
Q psy775 830 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLV 909 (1460)
Q Consensus 830 el~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~ 909 (1460)
+++.+.+.+|+.|+||.+|..|.+|+|++|. +-|-|.|..+|.+.-+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-----gVPsITTnLsGFG~~~~--------------------------- 509 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-----GVPSITTNLSGFGCWMQ--------------------------- 509 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-----T--EEEETTBHHHHHHH---------------------------
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc-----CCceeeccchhHHHHHH---------------------------
Confidence 6888899999999999999999999999998 66889999999776111
Q ss_pred hhhhhhcccCCCCceeEeccccCCcccccceEEeCC-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHH
Q psy775 910 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP-YEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRS 988 (1460)
Q Consensus 910 ~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP-~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 988 (1460)
+.+. ..+..|+-|++=--. |+ -.++++|+.|.....++..+|...+++..+.-..-++.+-..-
T Consensus 510 --~~~~--~~~~~GV~VvdR~~~-----------n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~y 574 (633)
T PF05693_consen 510 --EHIE--DPEEYGVYVVDRRDK-----------NYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKY 574 (633)
T ss_dssp --TTS---HHGGGTEEEE-SSSS------------HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHH
T ss_pred --Hhhc--cCcCCcEEEEeCCCC-----------CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 0000 011234444432111 11 0245666677777778887777666655544444455554444
Q ss_pred HHHHHh
Q psy775 989 FLKGMG 994 (1460)
Q Consensus 989 ~l~~l~ 994 (1460)
..+...
T Consensus 575 Y~~Ay~ 580 (633)
T PF05693_consen 575 YEKAYD 580 (633)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=97.64 E-value=9.9e-05 Score=70.83 Aligned_cols=79 Identities=25% Similarity=0.302 Sum_probs=61.8
Q ss_pred EEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 440 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 440 V~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
+++-|+..+|+++..+|+||| |+++|.+...+....+.+ ++.++ |+++++++|..+|+.|.+.++...++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 456788899999999999999 666677767677777743 67777 99999999999999877666666666
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
......+|+
T Consensus 74 ~~~v~~~~t 82 (92)
T PF13524_consen 74 RERVLKRHT 82 (92)
T ss_pred HHHHHHhCC
Confidence 555555666
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00014 Score=74.97 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=40.2
Q ss_pred EEEEecCCCcCCCCCCC-CCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 40 ALLLDYDGTLAPIAPHP-DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p-~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
+++||+||||.....++ ....+.+.++++|++++++ |+.++++|||+....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~-G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL-GFEIVISSSRNMRTY 54 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC-CCEEEEECCCCchhh
Confidence 68999999997532222 1245788999999999988 999999999997554
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00018 Score=87.98 Aligned_cols=78 Identities=18% Similarity=0.121 Sum_probs=58.0
Q ss_pred hcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHH-HHHhcCCCceEEEEeCCchhhhhhhh---cc-ccceeEccCC
Q psy775 33 IGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTL-QKLANLPDVHISIISGRNVHNVMEMV---GI-EGLTYAGNHG 107 (1460)
Q Consensus 33 ~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL-~~L~~~~g~~v~IvTGR~~~~l~~~l---~~-~~~~~ig~hG 107 (1460)
+..+++++|+.|+||||++.. +...+++...+++ +++.++ |+.++++|||++..+.++. ++ .....+++||
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~-gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nG 79 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRH-DSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVG 79 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcC-CeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCC
Confidence 345778999999999999742 2335776777777 888888 9999999999976665543 33 2334678899
Q ss_pred cccccCC
Q psy775 108 LEIIHPD 114 (1460)
Q Consensus 108 aei~~~g 114 (1460)
++|.+.+
T Consensus 80 t~I~~~~ 86 (413)
T PLN02382 80 TEIAYGE 86 (413)
T ss_pred cEEEeCC
Confidence 9998643
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00099 Score=83.14 Aligned_cols=82 Identities=13% Similarity=0.186 Sum_probs=52.6
Q ss_pred HHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc--------ccEEE-CCC--CH----HH
Q psy775 430 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--------EALIC-NPY--EI----DA 494 (1460)
Q Consensus 430 eL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--------~allV-NP~--D~----~e 494 (1460)
++..+.+.+|++|+||.||..|.+++|+.|. +.|-|.|..+|....+. .|+.| +=. +. ++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-----gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~ 536 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-----GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQ 536 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-----T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc-----CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHH
Confidence 4667799999999999999999999999998 55669999999875442 25544 322 33 45
Q ss_pred HHHHHHHHcCCCHHHHHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~R~~~ 516 (1460)
+++.|.+...++..+|....++
T Consensus 537 la~~l~~f~~~~~rqri~~Rn~ 558 (633)
T PF05693_consen 537 LADFLYKFCQLSRRQRIIQRNR 558 (633)
T ss_dssp HHHHHHHHHT--HHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHH
Confidence 6666666677776665544333
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.01 Score=77.63 Aligned_cols=131 Identities=17% Similarity=0.125 Sum_probs=89.1
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 343 IVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 343 vIL~VgRLd~~KGI~~lL~Af~~lL~--~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
+|.++.|+..-|+...+++.++++.+ ++|+. .+.+|..|.+...+.. -+++.+.+.+++.. .+|. ..|+
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~~--pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~----~kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPER--PVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR----GRIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC----CcEE
Confidence 78899999999999999999999865 34442 5777777755444321 13455555555431 0221 1456
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccC--CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNP 489 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSl--rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP 489 (1460)
++.+ .+.+--..++..|||++.||+ +|.-|+.=.=||. .|+|-+|..-|.-.+-- .|..+.+
T Consensus 551 fle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~------NG~LnlSvlDGww~E~~~g~nGwaig~ 617 (778)
T cd04299 551 FLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL------NGGLNLSVLDGWWDEGYDGENGWAIGD 617 (778)
T ss_pred EEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH------cCCeeeecccCccccccCCCCceEeCC
Confidence 6544 444433468999999999999 8888877666665 47888898888766652 2788877
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0095 Score=70.81 Aligned_cols=54 Identities=17% Similarity=0.065 Sum_probs=39.5
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCc-------c----CCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLR-------D----GMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlr-------E----GmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+.+.|.++.+|+..+|+. |+.+++.-. + .+.--..||||| |.|+|+|..++.++
T Consensus 209 V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-----G~PVI~~~~~~~~~ 273 (333)
T PRK09814 209 ISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-----GLPVIVWSKAAIAD 273 (333)
T ss_pred eEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-----CCCEEECCCccHHH
Confidence 667899999999999987 766664321 1 122226678999 78999999887666
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0006 Score=65.42 Aligned_cols=92 Identities=25% Similarity=0.293 Sum_probs=66.8
Q ss_pred EEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccC
Q psy775 840 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQIN 919 (1460)
Q Consensus 840 v~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 919 (1460)
+++-|+..+|++...+|+||| |+++|.+..++....+.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----G~~vi~~~~~~~~~~~~------------------------------------- 38 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----GTPVISDDSPGLREIFE------------------------------------- 38 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----CCeEEECChHHHHHHcC-------------------------------------
Confidence 356788889999999999999 66767666655444110
Q ss_pred CCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHH
Q psy775 920 EPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991 (1460)
Q Consensus 920 ~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 991 (1460)
.| ..++.++ |+++++++|...++.|...++...++.....+.|++.+-++++++
T Consensus 39 -----------~~-----~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 39 -----------DG-----EHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred -----------CC-----CeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 01 2467777 999999999999997766666666554444458898888887763
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00035 Score=69.52 Aligned_cols=56 Identities=25% Similarity=0.426 Sum_probs=45.0
Q ss_pred EEEEecCCCcCCCCCCC---CCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPHP---DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p---~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++..+.. ....+.+++.+.|++|+++ |+.++|+|||....+...+.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHH
Confidence 47999999999854310 1236889999999999999 99999999999777766653
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=80.38 Aligned_cols=122 Identities=12% Similarity=0.237 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q psy775 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 436 (1460)
Q Consensus 357 ~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~ 436 (1460)
...|+|++.+.++.|++. |=+ |.++. +..++.++ . +| ..++.+ ..+....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~te--------~s~kL~~L-~----~y-----~nvvly-~~~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALTE--------MSSKLMSL-D----KY-----DNVKLY-PNITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecCc--------ccHHHHHH-H----hc-----CCcEEE-CCcChHHHHHHHH
Confidence 999999999999999974 333 43321 11233333 1 12 234555 4455567889999
Q ss_pred hccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc--CCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 437 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS--PFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 437 aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS--e~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
.||+++.+|..||+++...||+.. |.+|+| ...|-.+.+.++.++++.|+++++++|.++|+++..
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc------CCcEEEEecccCCcccccCCceecCCCHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999985 555554 334555566678999999999999999999998753
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00049 Score=79.72 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=49.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCC-hhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc-ceeEccCCcc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLP-EETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG-LTYAGNHGLE 109 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip-~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~-~~~ig~hGae 109 (1460)
.+-+++||+||||+.. ....++. |++.++|.+|+++ |+.++|+|+++...+...+ ++.. +..+.++|..
T Consensus 125 ~~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 3458999999999974 1224455 9999999999999 9999999988766655444 4432 2234444543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.039 Score=72.37 Aligned_cols=125 Identities=18% Similarity=0.134 Sum_probs=82.2
Q ss_pred CCCCEEEEEEcCccccCCHHHHHHHHHHHHH--hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 738 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 738 ~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~--~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++.-+|.++.|+..-||..+.+..++++.+ ++|+ ..|++|..|.+...+.. -+++.+++.+++.+ -+|.
T Consensus 475 dpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~--- 546 (778)
T cd04299 475 DPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR--- 546 (778)
T ss_pred CCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC---
Confidence 3455588899999999999999999999865 3455 35888888876655421 12444455544430 0221
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
..|+++. ..+.+----++..|||.+.||. .|.-|+.=+=|+. +|+|-+|-.-|.-
T Consensus 547 -~kVvfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~------NG~LnlSvlDGww 603 (778)
T cd04299 547 -GRIVFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL------NGGLNLSVLDGWW 603 (778)
T ss_pred -CcEEEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH------cCCeeeecccCcc
Confidence 1345554 4444444457999999999999 7777776666554 4667777766643
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00081 Score=73.99 Aligned_cols=74 Identities=24% Similarity=0.400 Sum_probs=59.5
Q ss_pred CCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh---hhhhccccceeEccCCcccc
Q psy775 35 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV---MEMVGIEGLTYAGNHGLEII 111 (1460)
Q Consensus 35 ~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l---~~~l~~~~~~~ig~hGaei~ 111 (1460)
..-..++|.|+||||+++.-+ ++.+...+.+|++. |+.|+.||..+..++ .+.++..+..+++.||+-|.
T Consensus 4 ~~~~~lIFtDlD~TLl~~~ye------~~pA~pv~~el~d~-G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~ 76 (274)
T COG3769 4 IQMPLLIFTDLDGTLLPHSYE------WQPAAPVLLELKDA-GVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIY 76 (274)
T ss_pred cccceEEEEcccCcccCCCCC------CCccchHHHHHHHc-CCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEE
Confidence 344568999999999984333 46678889999999 999999999986653 45567888889999999888
Q ss_pred cCCC
Q psy775 112 HPDG 115 (1460)
Q Consensus 112 ~~g~ 115 (1460)
.+.+
T Consensus 77 ~p~~ 80 (274)
T COG3769 77 LPKG 80 (274)
T ss_pred eccc
Confidence 6654
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.01 Score=72.20 Aligned_cols=103 Identities=17% Similarity=0.090 Sum_probs=64.8
Q ss_pred CCCEEEEE--EcCccc-cCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLG--VDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~--VdRLd~-~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++|+. .+|..+ .|+++..++|++++.+++|++ .++..+.+. .. .+.++++..+.+. +
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~----~~vi~~~~~-~~-------~~~~~~~~~~~~~-----~ 251 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDL----RRVLPVVNF-KR-------RLQFEQIKAEYGP-----D 251 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCe----EEEEEeCCc-hh-------HHHHHHHHHHhCC-----C
Confidence 45555543 459887 799999999999999999975 343333221 11 1223333332221 1
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
. .+..+.+ +...+|++||++|.+| |.+.+|+++| +.|+|++--
T Consensus 252 ~-~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~-----G~P~Vv~yk 294 (385)
T TIGR00215 252 L-QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALI-----KTPMVVGYR 294 (385)
T ss_pred C-cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHc-----CCCEEEEEc
Confidence 1 2333332 3456899999999999 6677799999 667777743
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0014 Score=73.14 Aligned_cols=54 Identities=20% Similarity=0.378 Sum_probs=43.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH---hcCCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME---MVGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~---~~~~~~ 1456 (1460)
++++|+||||.. + +..+++...++|++|.+. |+.+++.|||+...+.. .++++.
T Consensus 5 li~~DlDGTLl~----~-~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 5 AIAIDIDGTITD----K-DRRLSLKAVEAIRKAEKL-GIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred EEEEecCCCcCC----C-CCccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 789999999994 3 335889999999999865 67999999999887764 456653
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.002 Score=71.51 Aligned_cols=53 Identities=23% Similarity=0.467 Sum_probs=44.2
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
++++|+||||.. + +..+++...++|++|.+. ++.+++.|||+...+..+ +++.
T Consensus 3 ~v~~DlDGTLl~----~-~~~i~~~~~~~i~~l~~~-g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 3 LVAIDIDGTLTE----P-NRMISERAIEAIRKAEKK-GIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred EEEEecCCCcCC----C-CcccCHHHHHHHHHHHHC-CCEEEEEcCCcchhHHHHHHHhCCC
Confidence 689999999994 2 346999999999999775 679999999999887664 5555
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0026 Score=73.95 Aligned_cols=54 Identities=17% Similarity=0.168 Sum_probs=40.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCccC-ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVL-PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~i-p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+-+++||+||||+.-. ...++ +|++.++|.+|+++ |++++|+|+.+...+...+
T Consensus 128 ~~~i~~D~D~TL~~~~---~~v~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~L 182 (303)
T PHA03398 128 PHVIVFDLDSTLITDE---EPVRIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSL 182 (303)
T ss_pred ccEEEEecCCCccCCC---CccccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 3489999999999731 12223 59999999999999 9999999966555544444
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0044 Score=70.56 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=42.7
Q ss_pred HHHhhcCCCcEEEEEecCCCcCCCCCC--CCCccCCh---------------------------hHHHHHHHHhcCCCce
Q psy775 29 LSKYIGTTNKLALLLDYDGTLAPIAPH--PDMAVLPE---------------------------ETKRTLQKLANLPDVH 79 (1460)
Q Consensus 29 ~~~~~~~~~~~~lFfDiDGTL~~~~~~--p~~a~ip~---------------------------s~~~aL~~L~~~~g~~ 79 (1460)
+++.+...++.+|+||+||||++-.+. ......++ .+++.|+.++++ |++
T Consensus 54 ~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~-G~~ 132 (237)
T TIGR01672 54 IENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR-GDA 132 (237)
T ss_pred HHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHC-CCE
Confidence 355566566779999999999986551 11111122 288999999999 999
Q ss_pred EEEEeCCc
Q psy775 80 ISIISGRN 87 (1460)
Q Consensus 80 v~IvTGR~ 87 (1460)
+++||+|.
T Consensus 133 i~iVTnr~ 140 (237)
T TIGR01672 133 IFFVTGRT 140 (237)
T ss_pred EEEEeCCC
Confidence 99999993
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0017 Score=68.96 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=37.9
Q ss_pred EEEEecCCCcCCCC----CC---CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIA----PH---PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~----~~---p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
++|||+||||++.. .. +..-.+.++ .+|++|+++ |++++|+||++...+...+.
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l~ 63 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRCK 63 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHHH
Confidence 78999999999721 11 000112222 389999999 99999999999777666553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0029 Score=64.74 Aligned_cols=47 Identities=26% Similarity=0.400 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCC---CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIA---PHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~---~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
+++||+||||.+-. ..-....+.+++.++|+.|+++ |+.++|+|+++
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~ 51 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQS 51 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 68999999999521 1112356789999999999998 99999999988
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0054 Score=70.12 Aligned_cols=58 Identities=22% Similarity=0.433 Sum_probs=47.1
Q ss_pred cCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCC
Q psy775 1391 GTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE 1455 (1460)
Q Consensus 1391 ~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~ 1455 (1460)
++..+.++|+|+||||.. ++ -.+++.+.+++++|.+. +.+++.|||+...+...++..
T Consensus 3 ~~~~~~i~~~D~DGTLl~----~~-~~i~~~~~~ai~~l~~~--i~fviaTGR~~~~~~~~~~~~ 60 (245)
T PLN02423 3 ARKPGVIALFDVDGTLTA----PR-KEATPEMLEFMKELRKV--VTVGVVGGSDLSKISEQLGKT 60 (245)
T ss_pred CCccceEEEEeccCCCcC----CC-CcCCHHHHHHHHHHHhC--CEEEEECCcCHHHHHHHhccc
Confidence 345677888999999983 22 35789999999999976 799999999999998777653
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0025 Score=68.83 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=39.7
Q ss_pred EEEEecCCCcCC---CCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~---~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||.||||+. ...++++..+.|++.++|++|+++ |++++|+|.-+
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~ 52 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQS 52 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 799999999994 223445677889999999999999 99999999865
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0056 Score=72.36 Aligned_cols=61 Identities=21% Similarity=0.329 Sum_probs=47.2
Q ss_pred cCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 17 KGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
+.+.+.+++.+.+.+ .. ++|||+||||..- . .+.|++.++|++|+++ |.+++++|+|+...
T Consensus 13 ~~~~~~~~~~~~~~~-~~-----~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~-g~~~~~~TN~~~~~ 73 (311)
T PLN02645 13 AQLLTLENADELIDS-VE-----TFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSM-GKKLVFVTNNSTKS 73 (311)
T ss_pred cccCCHHHHHHHHHh-CC-----EEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHC-CCEEEEEeCCCCCC
Confidence 344566677666655 22 7999999999852 2 3568999999999999 99999999998443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0026 Score=72.72 Aligned_cols=70 Identities=20% Similarity=0.229 Sum_probs=45.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc----cccceeEccCCccccc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG----IEGLTYAGNHGLEIIH 112 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~----~~~~~~ig~hGaei~~ 112 (1460)
++.+++.|+||||++ ..........+.++ .+...+..++++|||+++.+.+.+. +.+..+||++|.++.+
T Consensus 1 ~~~ll~sDlD~Tl~~-----~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~ 74 (247)
T PF05116_consen 1 PPRLLASDLDGTLID-----GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY 74 (247)
T ss_dssp -SEEEEEETBTTTBH-----CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCcC-----CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE
Confidence 367899999999992 11111223333333 2235589999999999999877663 2345688999999887
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.006 Score=70.24 Aligned_cols=49 Identities=35% Similarity=0.525 Sum_probs=42.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. ++ -.+++..+++|++|.++ |+.+++.|||+...+..+
T Consensus 4 li~~DlDGTLl~----~~-~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~ 52 (272)
T PRK15126 4 LAAFDMDGTLLM----PD-HHLGEKTLSTLARLRER-DITLTFATGRHVLEMQHI 52 (272)
T ss_pred EEEEeCCCcCcC----CC-CcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHH
Confidence 789999999994 33 36999999999999886 679999999999997766
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0052 Score=70.32 Aligned_cols=49 Identities=27% Similarity=0.474 Sum_probs=40.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeC---Cchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTG---R~~~~l~~~l 95 (1460)
.++||+||||.. ....+| ++.++|++|+++ |.+++++|| |+...+.+.+
T Consensus 3 ~~~~D~DGtl~~-----~~~~i~-~a~~~l~~l~~~-g~~~~~~Tnn~~r~~~~~~~~l 54 (249)
T TIGR01457 3 GYLIDLDGTMYK-----GKERIP-EAETFVHELQKR-DIPYLFVTNNSTRTPESVAEML 54 (249)
T ss_pred EEEEeCCCceEc-----CCeeCc-CHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHH
Confidence 688999999996 223455 899999999999 999999996 8887766655
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0044 Score=71.30 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=37.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
+++||+||||..-.. ....+.|++.++|++|+++ |++++++|||+...
T Consensus 3 ~i~~D~DGtl~~~~~--~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 3 GVLLDISGVLYISDA--KSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred EEEEeCCCeEEeCCC--cccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 689999999985311 0012677999999999999 99999999987554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0072 Score=62.26 Aligned_cols=55 Identities=22% Similarity=0.202 Sum_probs=41.3
Q ss_pred EEEEecCCCcCCCCCCCCCc-------cCChhHHHHHHHHhcCCCceEEEEeCC-chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMA-------VLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a-------~ip~s~~~aL~~L~~~~g~~v~IvTGR-~~~~l~~~l 95 (1460)
+++||+||||++.-.+.... .+.+++.+.|+.|+++ |++++|+|++ +.......+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELL 64 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHH
Confidence 68899999999862111111 2578999999999999 9999999999 655544444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0056 Score=60.81 Aligned_cols=57 Identities=25% Similarity=0.403 Sum_probs=46.4
Q ss_pred EEEEecCCCCCCCCCC---CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPH---PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~---P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
+++||+||||.+-... +....+.+++.+.|++|.+. +..++|+|||....+...+..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHH
Confidence 4789999999875432 34568899999999999987 578999999998888876543
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0075 Score=69.16 Aligned_cols=49 Identities=22% Similarity=0.365 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. + ...+++...++|++|.+. |+.+++.|||+...+...
T Consensus 5 li~~DlDGTLl~----~-~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~ 53 (270)
T PRK10513 5 LIAIDMDGTLLL----P-DHTISPAVKQAIAAARAK-GVNVVLTTGRPYAGVHRY 53 (270)
T ss_pred EEEEecCCcCcC----C-CCccCHHHHHHHHHHHHC-CCEEEEecCCChHHHHHH
Confidence 789999999994 2 246899999999999876 679999999999987654
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0078 Score=68.92 Aligned_cols=49 Identities=33% Similarity=0.483 Sum_probs=41.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. ++ -.+++...++|+++.+. |+.+++.|||+...+..+
T Consensus 4 li~~DlDGTLl~----~~-~~is~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~ 52 (266)
T PRK10976 4 VVASDLDGTLLS----PD-HTLSPYAKETLKLLTAR-GIHFVFATGRHHVDVGQI 52 (266)
T ss_pred EEEEeCCCCCcC----CC-CcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHH
Confidence 789999999993 33 36899999999999876 679999999999987654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0075 Score=68.71 Aligned_cols=58 Identities=22% Similarity=0.223 Sum_probs=47.1
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
++++++|+||||.+-. +.+ -.++|.+.++++++.++ ++.++++|||+...++++ ++++
T Consensus 1 ~~li~tDlDGTLl~~~-~~~-~~~~~~~~~~i~~~~~~-gi~fv~aTGR~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHT-DGD-NQALLRLNALLEDHRGE-DSLLVYSTGRSPHSYKELQKQKPLL 61 (249)
T ss_pred CeEEEEcCCCcCcCCC-CCC-hHHHHHHHHHHHHhhcc-CceEEEEcCCCHHHHHHHHhcCCCC
Confidence 4689999999999864 233 55779999999998876 468999999999999888 5554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0096 Score=67.97 Aligned_cols=52 Identities=35% Similarity=0.551 Sum_probs=44.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
++++|+||||.. . +-.+++..+++|+++.+. |+.+++.|||+...+...++.
T Consensus 7 lia~DlDGTLL~----~-~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 7 ILLFDVDGTLTK----P-RNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred EEEEECcCCCcC----C-CCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhh
Confidence 799999999982 2 246888999999999887 689999999999999998874
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0099 Score=64.11 Aligned_cols=47 Identities=26% Similarity=0.270 Sum_probs=35.9
Q ss_pred EEEEecCCCcCCCCC------CCCCcc-CChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAP------HPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p~~a~-ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||.||||+.... +|++-+ +-|++.++|++|+++ |++++|+|..+
T Consensus 15 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~ 68 (166)
T TIGR01664 15 VAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQS 68 (166)
T ss_pred EEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 688899999996321 222222 348999999999999 99999999754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.012 Score=67.55 Aligned_cols=51 Identities=29% Similarity=0.491 Sum_probs=42.8
Q ss_pred EEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1396 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
-++++|+||||..=. ..+++.+.++|+++.+. ++.++++|||+...++..+
T Consensus 4 kli~~DlDGTLl~~~-----~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~ 54 (264)
T COG0561 4 KLLAFDLDGTLLDSN-----KTISPETKEALARLREK-GVKVVLATGRPLPDVLSIL 54 (264)
T ss_pred eEEEEcCCCCccCCC-----CccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHH
Confidence 379999999998532 22999999999988665 6899999999999888776
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.012 Score=67.46 Aligned_cols=49 Identities=24% Similarity=0.435 Sum_probs=40.8
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. ++ -.+++...++|+++.+. |+.+++.|||+...+...
T Consensus 5 li~~DlDGTLl~----~~-~~i~~~~~~ai~~~~~~-G~~~~iaTGR~~~~~~~~ 53 (272)
T PRK10530 5 VIALDLDGTLLT----PK-KTILPESLEALARAREA-GYKVIIVTGRHHVAIHPF 53 (272)
T ss_pred EEEEeCCCceEC----CC-CccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHH
Confidence 789999999983 22 35888999999999887 679999999998876654
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.067 Score=66.33 Aligned_cols=122 Identities=12% Similarity=0.236 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH
Q psy775 757 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 836 (1460)
Q Consensus 757 ~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~ 836 (1460)
...++|++++.+..|++ .|=. |.++. +..++.++ .+ | .-++.+. .+....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~----~f~I-ga~te--------~s~kL~~L-~~----y-----~nvvly~-~~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDY----HFHI-AALTE--------MSSKLMSL-DK----Y-----DNVKLYP-NITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCc----EEEE-EecCc--------ccHHHHHH-Hh----c-----CCcEEEC-CcChHHHHHHHH
Confidence 89999999999999995 3433 54432 22445444 22 2 1234444 555667889999
Q ss_pred HccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CC-CcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhh
Q psy775 837 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FA-GAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFV 914 (1460)
Q Consensus 837 ~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~a-G~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~ 914 (1460)
.||+++.+|..||+++...||+.. |.+|+|= .+ |..+
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~------G~pI~afd~t~~~~~----------------------------------- 385 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY------NLLILGFEETAHNRD----------------------------------- 385 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc------CCcEEEEecccCCcc-----------------------------------
Confidence 999999999999999999999875 4444442 11 1111
Q ss_pred hcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 915 ACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 915 ~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
+. ..+.++++.|+++++++|.++|+.+..
T Consensus 386 ---------------~i------~~g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 386 ---------------FI------ASENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred ---------------cc------cCCceecCCCHHHHHHHHHHHhcCHHH
Confidence 11 124689999999999999999998754
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.37 Score=58.66 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=129.0
Q ss_pred CcHHHHhhhcc-CceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-
Q psy775 261 WSDEILQGMLG-CDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID- 338 (1460)
Q Consensus 261 ~r~eil~gLL~-aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~- 338 (1460)
.+..+.+.|+. .|+|--|+..++..|.+ ||... +..-| ..|..+.|.-.+.... ...+.
T Consensus 166 k~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~------v~v~G-NlKfd~~~~~~~~~~~-------~~~r~~ 226 (419)
T COG1519 166 KLKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP------VVVTG-NLKFDIEPPPQLAAEL-------AALRRQ 226 (419)
T ss_pred HHHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc------eEEec-ceeecCCCChhhHHHH-------HHHHHh
Confidence 34566666554 59999999999999998 55432 11111 1222222221111111 11111
Q ss_pred -cC-CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCc
Q psy775 339 -TK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416 (1460)
Q Consensus 339 -~~-~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~ 416 (1460)
++ +++++..+. ...--.-.++++..+++++|+. ++ |.+|- .+ +=-+.+++++.+.+-+++.-..
T Consensus 227 l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~-----ll-IlVPR---Hp---ERf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 227 LGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNL-----LL-ILVPR---HP---ERFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred cCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCc-----eE-EEecC---Ch---hhHHHHHHHHHHcCCeEEeecC
Confidence 33 888888888 3334445889999999999985 22 22231 12 2235677777777765532111
Q ss_pred -------ccEEEEcCCCCHHHHHHHHHhccEEEEccC---CCCCCcceeeeeeeccCCCCCeEEEcCC----CCchhcc-
Q psy775 417 -------SPIRYIYGCISQDELASFYRDAAVALVTPL---RDGMNLVAKEFVACQINEPPGVLIVSPF----AGAGEQM- 481 (1460)
Q Consensus 417 -------~pIv~~~g~v~~eeL~aLY~aADV~VvpSl---rEGfnLValEamAcq~~~~~GvlVlSe~----aGaa~~L- 481 (1460)
++|... -+.-||..+|+.||++.+--. .-|-| ++|+.+| +.|+|...+ .-+++.+
T Consensus 293 ~~~~~~~tdV~l~---DtmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~-----~~pvi~Gp~~~Nf~ei~~~l~ 362 (419)
T COG1519 293 GDPPFSDTDVLLG---DTMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAF-----GTPVIFGPYTFNFSDIAERLL 362 (419)
T ss_pred CCCCCCCCcEEEE---ecHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHc-----CCCEEeCCccccHHHHHHHHH
Confidence 233322 256899999999999987543 33555 6899998 455565444 3344444
Q ss_pred --cccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhc
Q psy775 482 --HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHM 524 (1460)
Q Consensus 482 --~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~ 524 (1460)
++++.|+. .+.+++++...++. +++|+...+.....+..+
T Consensus 363 ~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 363 QAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred hcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 23777865 78888888888876 555555555555555543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.016 Score=66.96 Aligned_cols=56 Identities=20% Similarity=0.349 Sum_probs=44.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
+.-++|+|+||||.. ++ -.+++...++|++|.+. |+.+++.|||+...+... +|++
T Consensus 6 ~~~lI~~DlDGTLL~----~~-~~i~~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLD----SH-TYDWQPAAPWLTRLREA-QVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcC----CC-CcCcHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 456899999999973 32 35788899999999876 789999999999887754 5554
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.77 E-value=1.5 Score=53.56 Aligned_cols=164 Identities=20% Similarity=0.142 Sum_probs=102.0
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC----
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW---- 816 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~---- 816 (1460)
+++++..+. ...--.-.+.|+..+++++|+. ..|.+|. . + +=-+.+++++.+.|-+++....
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~------llIlVPR-H--p---ERf~~v~~l~~~~gl~~~~rS~~~~~ 296 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNL------LLILVPR-H--P---ERFKAVENLLKRKGLSVTRRSQGDPP 296 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCc------eEEEecC-C--h---hhHHHHHHHHHHcCCeEEeecCCCCC
Confidence 788888777 3333344788999999999985 2233442 1 1 2235678888888766543222
Q ss_pred ---ccEEEEcCCCCHHHHHHHHHHccEEEECCC---ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 817 ---SPIRYIYGCISQDELASFYRDAAVALVTPL---RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 817 ---~pvv~~~g~v~~eel~Aly~~ADv~vvtSl---rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
++|.... +.-|+..+|++||+++|--. ..|-| ++|..++ +.|+|.-.+.-.-
T Consensus 297 ~~~tdV~l~D---tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~-----~~pvi~Gp~~~Nf------------ 354 (419)
T COG1519 297 FSDTDVLLGD---TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAF-----GTPVIFGPYTFNF------------ 354 (419)
T ss_pred CCCCcEEEEe---cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHc-----CCCEEeCCccccH------------
Confidence 2344333 67799999999999988643 34444 6899888 5566655544211
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
.++++.+ . .-.+++.|+. .+.++.+++..++. +++|+...
T Consensus 355 --~ei~~~l--------------~---------------------~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~ 394 (419)
T COG1519 355 --SDIAERL--------------L---------------------QAGAGLQVED--ADLLAKAVELLLAD-EDKREAYG 394 (419)
T ss_pred --HHHHHHH--------------H---------------------hcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHH
Confidence 1222221 1 1135677874 88888888777776 66666665
Q ss_pred HHHHhHHHhc
Q psy775 971 NYLRKREKVH 980 (1460)
Q Consensus 971 ~~~~~~v~~~ 980 (1460)
+...+.+..+
T Consensus 395 ~~~~~~v~~~ 404 (419)
T COG1519 395 RAGLEFLAQN 404 (419)
T ss_pred HHHHHHHHHh
Confidence 6666666655
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.018 Score=65.71 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=42.5
Q ss_pred HHhhcCCCcEEEEEecCCCcCCCCCC-----------------------------CCCccCChhHHHHHHHHhcCCCceE
Q psy775 30 SKYIGTTNKLALLLDYDGTLAPIAPH-----------------------------PDMAVLPEETKRTLQKLANLPDVHI 80 (1460)
Q Consensus 30 ~~~~~~~~~~~lFfDiDGTL~~~~~~-----------------------------p~~a~ip~s~~~aL~~L~~~~g~~v 80 (1460)
++.+...++.++.||||||+++-.+. -..+.+-+++++.|+.|+++ |+.+
T Consensus 55 ~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~-G~~I 133 (237)
T PRK11009 55 EKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKR-GDSI 133 (237)
T ss_pred hhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHC-CCeE
Confidence 44445455779999999999962210 11234556699999999999 9999
Q ss_pred EEEeCCc
Q psy775 81 SIISGRN 87 (1460)
Q Consensus 81 ~IvTGR~ 87 (1460)
+++|||+
T Consensus 134 ~iVTnR~ 140 (237)
T PRK11009 134 YFITGRT 140 (237)
T ss_pred EEEeCCC
Confidence 9999996
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.0091 Score=62.74 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCCCCC-----CCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAPHP-----DMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p-----~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||+||||++..... ....+-|++.++|+.|+++ |+.++|+|+.+
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCC
Confidence 78999999999864311 1234678999999999999 99999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.025 Score=58.55 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=39.3
Q ss_pred EEEEecCCCCCCCCCCC-CCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH
Q psy775 1397 ALLLDYDGTLAPIAPHP-DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 1449 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P-~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~ 1449 (1460)
++++|+||||..-...| ....+.+++.++|+++.+. +..+.++|||+.....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~-G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL-GFEIVISSSRNMRTYE 55 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC-CCEEEEECCCCchhhh
Confidence 68999999996322122 2356888999999999664 5689999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.023 Score=65.75 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=40.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++|+|.||||.. ++ ..+++...++|++|.+. ++.++++|||+...+..++
T Consensus 6 li~~DlDGTLl~----~~-~~~~~~~~~ai~~l~~~-Gi~~~iaTgR~~~~~~~~~ 55 (273)
T PRK00192 6 LVFTDLDGTLLD----HH-TYSYEPAKPALKALKEK-GIPVIPCTSKTAAEVEVLR 55 (273)
T ss_pred EEEEcCcccCcC----CC-CcCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHH
Confidence 789999999984 22 35678899999999876 6799999999988866544
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.011 Score=64.50 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=41.1
Q ss_pred cEEEEEecCCCcCCCC--CCCCCccCChhHH---HHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 38 KLALLLDYDGTLAPIA--PHPDMAVLPEETK---RTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~--~~p~~a~ip~s~~---~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
--+++||+||||++-. ..+....+..-.. .+++.|+++ |+.++|+|||+...+...+.
T Consensus 21 ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~-Gi~v~I~T~~~~~~v~~~l~ 83 (183)
T PRK09484 21 IRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTS-GIEVAIITGRKSKLVEDRMT 83 (183)
T ss_pred ceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHC-CCEEEEEeCCCcHHHHHHHH
Confidence 4489999999999731 1111222333333 799999988 99999999999877766654
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.018 Score=67.02 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=35.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 89 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~ 89 (1460)
+++||+||||..- . .+.+++.++|++|+++ |.+++++|||+..
T Consensus 4 ~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~-g~~~~~~Tnns~~ 46 (279)
T TIGR01452 4 GFIFDCDGVLWLG-----E-RVVPGAPELLDRLARA-GKAALFVTNNSTK 46 (279)
T ss_pred EEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 6889999999862 2 2455699999999999 9999999998743
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.015 Score=62.54 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=38.1
Q ss_pred EEEEEecCCCcCCCCC------CCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 39 LALLLDYDGTLAPIAP------HPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
.++|||.||||....+ .++...+-|++.++|++|+++ |++++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 3899999999988432 223445668999999999999 9999999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.019 Score=65.86 Aligned_cols=45 Identities=13% Similarity=0.196 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
+++||+||||..- . .+.|++.++|++|+++ |.+++++|||+....
T Consensus 3 ~v~~DlDGtL~~~-----~-~~~p~a~~~l~~L~~~-g~~~~~~Tn~~~~~~ 47 (248)
T PRK10444 3 NVICDIDGVLMHD-----N-VAVPGAAEFLHRILDK-GLPLVLLTNYPSQTG 47 (248)
T ss_pred EEEEeCCCceEeC-----C-eeCccHHHHHHHHHHC-CCeEEEEeCCCCCCH
Confidence 6889999999862 2 4678999999999999 999999999986443
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.02 Score=61.44 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=34.4
Q ss_pred EEEEecCCCcCCCCC------CCCC-ccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 40 ALLLDYDGTLAPIAP------HPDM-AVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p~~-a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
++|||.||||+.-.. +|++ ..+++++.++|++|.++ |+.++|+|.-
T Consensus 2 ia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvTNQ 54 (159)
T PF08645_consen 2 IAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVTNQ 54 (159)
T ss_dssp EEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEEE-
T ss_pred EEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEeCc
Confidence 689999999986432 3444 34677899999999999 9999999953
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.032 Score=59.76 Aligned_cols=51 Identities=16% Similarity=0.220 Sum_probs=39.7
Q ss_pred EEEEecCCCCCCCC------CCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhH
Q psy775 1397 ALLLDYDGTLAPIA------PHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 1448 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~------~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l 1448 (1460)
++++|+||||+.-. +--...+++|.+.++++++.+. +..+.++|||+...+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~ 57 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQA 57 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHH
Confidence 37899999999531 1111147899999999999886 579999999998766
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >KOG3189|consensus | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.036 Score=60.52 Aligned_cols=81 Identities=23% Similarity=0.231 Sum_probs=62.9
Q ss_pred hcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc----cceeEccCCc
Q psy775 33 IGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE----GLTYAGNHGL 108 (1460)
Q Consensus 33 ~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~----~~~~ig~hGa 108 (1460)
.++.++.++.||.||||++ ....++|++.+.|++|+++ +.+.++-|-+++.+.+.++.. .+.....||.
T Consensus 6 ~~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~--v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl 78 (252)
T KOG3189|consen 6 AARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKK--VTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGL 78 (252)
T ss_pred hhcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhh--eEEEEeecHHHHHHHHHhchhHHhhhcccccCCCe
Confidence 3445678999999999996 4567999999999999988 788999998888887777532 2233578999
Q ss_pred ccccCCCCcccc
Q psy775 109 EIIHPDGSRFVH 120 (1460)
Q Consensus 109 ei~~~g~~i~~~ 120 (1460)
.-...|+..-++
T Consensus 79 ~~yk~gk~~~~Q 90 (252)
T KOG3189|consen 79 VAYKGGKLLSKQ 90 (252)
T ss_pred eEeeCCcchhHH
Confidence 888777654443
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.026 Score=56.04 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=33.3
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++||+||||.. ...+-|++.++|++|+++ |.+++++|..+
T Consensus 1 ~l~D~dGvl~~------g~~~ipga~e~l~~L~~~-g~~~~~lTNns 40 (101)
T PF13344_consen 1 FLFDLDGVLYN------GNEPIPGAVEALDALRER-GKPVVFLTNNS 40 (101)
T ss_dssp EEEESTTTSEE------TTEE-TTHHHHHHHHHHT-TSEEEEEES-S
T ss_pred CEEeCccEeEe------CCCcCcCHHHHHHHHHHc-CCCEEEEeCCC
Confidence 58999999985 234678999999999999 99999999875
|
... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.03 Score=59.89 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=42.0
Q ss_pred EEEEecCCCcCCC------CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhh
Q psy775 40 ALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 92 (1460)
Q Consensus 40 ~lFfDiDGTL~~~------~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~ 92 (1460)
++++|||||++.- .+.-......+++.+..++++++ |+++.-+|+|+..+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~-GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN-GYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC-CeEEEEECcCcHHHHH
Confidence 4899999999874 22223336789999999999999 9999999999976643
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.041 Score=56.27 Aligned_cols=47 Identities=26% Similarity=0.422 Sum_probs=37.6
Q ss_pred EEEEecCCCCCC---CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap---i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||.||||.. .+..=....+.|++.++|+.|.+. +..++|+|+++
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~ 51 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQS 51 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 689999999994 222122467889999999999765 67999999998
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.059 Score=62.94 Aligned_cols=57 Identities=21% Similarity=0.224 Sum_probs=45.1
Q ss_pred cEEEEEecCCCcCCCCCCC----C---CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 38 KLALLLDYDGTLAPIAPHP----D---MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p----~---~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.-++++|+||||.....+. . ...+.+++.++|++|+++ |+.++++|||+.......+
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHHHH
Confidence 4588899999999865421 1 456789999999999999 9999999999876654444
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.067 Score=62.57 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=42.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH---HhcCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM---EMVGIE 1455 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~---~~~~~~ 1455 (1460)
++|+|+||||..-. ...++.+.++|++|.++ +++|++.|||+..++. +.+++.
T Consensus 3 LIftDLDGTLLd~~-----~~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 3 LVLSSLDGSLLDLE-----FNSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred EEEEeCCCCCcCCC-----CcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 68999999998632 24667799999999987 7899999999998854 445554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.058 Score=62.61 Aligned_cols=54 Identities=26% Similarity=0.268 Sum_probs=42.1
Q ss_pred CCcEEEEEecCCCcCCCCCC---------C------------CCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 36 TNKLALLLDYDGTLAPIAPH---------P------------DMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~---------p------------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
.++.+++||||+|+++..+. + ..+.+-|++.+.|+.|+++ |+.++++|||+...
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~iVTnR~~~~ 147 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIFYVSNRSEKE 147 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEEEEeCCCcch
Confidence 56789999999999875421 1 1234558899999999999 99999999998443
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.082 Score=60.02 Aligned_cols=54 Identities=28% Similarity=0.274 Sum_probs=43.7
Q ss_pred CCcEEEEEecCCCcCCCCC---------------------CCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 36 TNKLALLLDYDGTLAPIAP---------------------HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~---------------------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
..+.++.||||-|+++-.+ ....+..-|+++++++.|+++ |+.|+++|||+...
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~-G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL-GIKIFLLSGRWEEL 149 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC-CCEEEEEcCCChHH
Confidence 4678999999999998331 123566778999999999999 99999999998544
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.1 Score=56.41 Aligned_cols=44 Identities=20% Similarity=0.195 Sum_probs=38.6
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
-++++|+||||.+. ....+.+++.++|+.|+++ |++++|+|+.+
T Consensus 26 ~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~ 69 (170)
T TIGR01668 26 KGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAA-GRKLLIVSNNA 69 (170)
T ss_pred CEEEEecCCccccC----CCCCcChhHHHHHHHHHHc-CCEEEEEeCCc
Confidence 48999999999974 3346889999999999999 99999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.059 Score=61.23 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=39.0
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
++||+||||.+- . .+.+++.++|+.++++ |.++.++| ||+..++.+.+
T Consensus 1 ~lfD~DGvL~~~-----~-~~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWLG-----H-KPIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCcC-----C-ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHH
Confidence 479999999862 2 2355999999999999 99999998 89887765554
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.086 Score=66.55 Aligned_cols=51 Identities=22% Similarity=0.243 Sum_probs=39.6
Q ss_pred CCcEEEEEecCCCcCCCC------CCCCCcc-CChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 36 TNKLALLLDYDGTLAPIA------PHPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~------~~p~~a~-ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++.-++|||.||||..-. .+|++-. +.|++.++|++|.++ |++++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCc
Confidence 334589999999999632 2233333 579999999999999 99999999854
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.053 Score=58.76 Aligned_cols=47 Identities=30% Similarity=0.333 Sum_probs=38.8
Q ss_pred EEEEecCCCcCCCCC--CCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAP--HPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~--~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|+|-||||...+. +++...+-|++++.|++|+++ |++++|+|+.+
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~ 54 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQP 54 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 899999999976522 223556779999999999999 99999999965
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.036 Score=63.56 Aligned_cols=53 Identities=21% Similarity=0.321 Sum_probs=35.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
+.++++|+||||. +.+......+.+.++ .....++.++++|||+++.+.+.+.
T Consensus 2 ~~ll~sDlD~Tl~-----~~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~ 54 (247)
T PF05116_consen 2 PRLLASDLDGTLI-----DGDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLR 54 (247)
T ss_dssp SEEEEEETBTTTB-----HCHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEEECCCCCc-----CCCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHH
Confidence 5689999999999 111222334444444 3447788999999999999998765
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.09 Score=67.21 Aligned_cols=50 Identities=22% Similarity=0.417 Sum_probs=42.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.. . +-.+++...++|+++.+. |+.+++.|||+...+...+
T Consensus 310 LIa~DLDGTLLn----~-d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l 359 (580)
T PLN02887 310 YIFCDMDGTLLN----S-KSQISETNAKALKEALSR-GVKVVIATGKARPAVIDIL 359 (580)
T ss_pred EEEEeCCCCCCC----C-CCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH
Confidence 799999999983 2 346899999999999886 6799999999998876544
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.051 Score=58.77 Aligned_cols=47 Identities=19% Similarity=0.333 Sum_probs=40.1
Q ss_pred EEEEecCCCCC---CCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLA---PIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLa---pi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++|||.||||. +.+.++++..+.|++.++|+.|.+. +.+++|+|.-+
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~ 52 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQS 52 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 79999999998 3445677888899999999999875 67999999766
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.075 Score=64.03 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=40.7
Q ss_pred EEEEEecCCCcCCC------CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 39 LALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~------~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
-++|||.||||+.. ...++...+.|++.++|..|+++ |++++|+|+.
T Consensus 3 k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~-G~kL~IvTNq 55 (354)
T PRK05446 3 KILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA-GYKLVMVTNQ 55 (354)
T ss_pred cEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC-CCeEEEEECC
Confidence 48999999999985 33455678899999999999998 9999999985
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.11 Score=60.87 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=42.3
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCC-hhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLP-EETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~-~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+-+++||+||||..= ...+++. |++.++|++|.++ |+++||+|+++.+.+.+.+
T Consensus 126 ~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L 180 (301)
T TIGR01684 126 PHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESM 180 (301)
T ss_pred ceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHH
Confidence 348999999999754 2245555 9999999999987 6799999988877665443
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.076 Score=57.61 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=38.4
Q ss_pred EEEEecCCCcCCCC----CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIA----PHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~----~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||-||||.-.. .......+-|++.++|++|+++ |++++|+|+.+
T Consensus 5 ~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 5 AIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred EEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 79999999996543 2233455778999999999999 99999999875
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.16 Score=58.11 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=54.0
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCC---------CCC--------------------CcCCChhHHHH
Q psy775 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAP---------HPD--------------------MAVLPEETKRT 1425 (1460)
Q Consensus 1375 ~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~---------~P~--------------------~a~~~~~~~~~ 1425 (1460)
.|-+--+.+++-..+ ...++++++||+||||..=.+ +|+ .+.+-+.+.+.
T Consensus 44 ~~~~~~~~~~~~~~~-~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~el 122 (237)
T TIGR01672 44 APIHWISVAQIENSL-EGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQL 122 (237)
T ss_pred CCeeEEEHHHHHHhc-CCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHH
Confidence 444555666655553 455678999999999987333 221 11233348888
Q ss_pred HHHHhcCCCceEEEEcCC-------ChhhHHHhcCCCC
Q psy775 1426 LQKLANLPDVHISIISGR-------NVHNVMEMVGIEG 1456 (1460)
Q Consensus 1426 L~~La~~~~~~vAvvSGR-------~~~~l~~~~~~~~ 1456 (1460)
|+.+.++ |..++|||+| ....+.+.+|++.
T Consensus 123 L~~l~~~-G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 123 IDMHQRR-GDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred HHHHHHC-CCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 9999876 6799999999 3456666777764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=93.24 E-value=8.1 Score=46.93 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=57.0
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhc----c---cccEEECC--CC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ----M---HEALICNP--YE 491 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~----L---~~allVNP--~D 491 (1460)
.+.+.+++.+ ++..||++|.. -|.| +..|+++++ .|+|+.-..+-... + +-|..++. .+
T Consensus 278 ~~~~~~p~~~---ll~~~~~~I~h---gG~~-t~~Eal~~G-----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~ 345 (392)
T TIGR01426 278 EVRQWVPQLE---ILKKADAFITH---GGMN-STMEALFNG-----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT 345 (392)
T ss_pred EEeCCCCHHH---HHhhCCEEEEC---CCch-HHHHHHHhC-----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence 3457888754 58899998864 4666 669999994 44455444332211 2 22666654 45
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 492 IDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 492 ~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.++++++|.++|..+. .+.+.+.+.+.+....
T Consensus 346 ~~~l~~ai~~~l~~~~--~~~~~~~l~~~~~~~~ 377 (392)
T TIGR01426 346 AEKLREAVLAVLSDPR--YAERLRKMRAEIREAG 377 (392)
T ss_pred HHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHcC
Confidence 7899999999998653 3334455555554433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.038 Score=62.74 Aligned_cols=54 Identities=19% Similarity=0.178 Sum_probs=41.3
Q ss_pred CCcEEEEEecCCCcCCCCCC---------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 36 TNKLALLLDYDGTLAPIAPH---------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~---------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
.++.+++||||+|+++-... ...+..-|++++.++.++++ |+.|+++|||+-..
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~-G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR-GVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT-TEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC-CCeEEEEecCCchh
Confidence 56889999999998763221 11124445688999999999 99999999998653
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.17 Score=52.09 Aligned_cols=55 Identities=24% Similarity=0.257 Sum_probs=40.1
Q ss_pred EEEEecCCCCCCCC---CCCCCc----CCChhHHHHHHHHhcCCCceEEEEcCC-ChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIA---PHPDMA----VLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~---~~P~~a----~~~~~~~~~L~~La~~~~~~vAvvSGR-~~~~l~~~~ 1452 (1460)
++++|+||||.+-- -.++.. .+.+++.+.|+.|.++ +.+++|+|++ +...+...+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELL 64 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHH
Confidence 68899999999652 121111 3678999999999775 5799999999 665554443
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.27 Score=63.43 Aligned_cols=51 Identities=18% Similarity=0.122 Sum_probs=40.4
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+-++|+|+||||..- +. ..++...++|++|.++ ++++++.|||+...+..+
T Consensus 416 ~KLIfsDLDGTLLd~----d~-~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l 466 (694)
T PRK14502 416 KKIVYTDLDGTLLNP----LT-YSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLY 466 (694)
T ss_pred eeEEEEECcCCCcCC----CC-ccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHH
Confidence 348999999999852 22 4556789999999876 689999999999876644
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.14 Score=53.82 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=38.7
Q ss_pred EEEEecCCCCCCC-----CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPI-----APHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi-----~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||.||||..= ...++...+.|++.++|+.|.++ +..++|+|..+
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCC
Confidence 6899999999873 34455567889999999999876 67999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.17 Score=57.68 Aligned_cols=42 Identities=17% Similarity=0.129 Sum_probs=36.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
+++||+||||..- ..+.|++.++|++|+++ |++++++|+.+.
T Consensus 10 ~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~-G~~~~ivTN~~~ 51 (242)
T TIGR01459 10 VFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQ-GKPVYFVSNSPR 51 (242)
T ss_pred EEEEecccccccC------CccCccHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 6889999999852 34679999999999999 999999988653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=92.53 E-value=1.5 Score=54.70 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=58.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..++.+..++.++ -+.-++.+.++|++-|+. +|+....+.. . ++.+.+.+.+- |- .-.-
T Consensus 283 ~d~vvF~~fn~~~KI--~p~~l~~W~~IL~~vP~S----~L~L~~~~~~--~------~~~l~~~~~~~----Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKI--SPETLDLWARILKAVPNS----RLWLLRFPAS--G------EARLRRRFAAH----GV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-GGG----HHHHHHHHHHHHHSTTE----EEEEEETSTT--H------HHHHHHHHHHT----TS--GGG
T ss_pred CCceEEEecCccccC--CHHHHHHHHHHHHhCCCc----EEEEeeCCHH--H------HHHHHHHHHHc----CC-Chhh
Confidence 567777777877654 688899999999999985 3444444431 1 12233333322 21 1123
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
++ |.+..+.+|..+.|+.+||++.|..+-| +.+.+||+..
T Consensus 344 i~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm 383 (468)
T PF13844_consen 344 II-FSPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM 383 (468)
T ss_dssp EE-EEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH
T ss_pred EE-EcCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc
Confidence 44 4557788999999999999999998877 5677899887
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.18 Score=53.76 Aligned_cols=57 Identities=23% Similarity=0.249 Sum_probs=38.2
Q ss_pred EEEEecCCCcCCCCCCCCC-----ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc
Q psy775 40 ALLLDYDGTLAPIAPHPDM-----AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 97 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~-----a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~ 97 (1460)
+++||+||||++-.-+-+. ....---=-.|+.|.+. |+.++|+|||....+..+..-
T Consensus 10 Lli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~-Gi~vAIITGr~s~ive~Ra~~ 71 (170)
T COG1778 10 LLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKS-GIKVAIITGRDSPIVEKRAKD 71 (170)
T ss_pred EEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHc-CCeEEEEeCCCCHHHHHHHHH
Confidence 7899999999983221110 00011112467888887 999999999998777777643
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.13 Score=54.61 Aligned_cols=53 Identities=21% Similarity=0.313 Sum_probs=35.8
Q ss_pred EEEEecCCCCCC----CCCCC---CCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAP----IAPHP---DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P---~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++|||.||||.. +..+. ..-...++ .+|++|.++ ++.++|+||++...+.+.+
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l 62 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRC 62 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHH
Confidence 689999999997 33331 11112222 278999775 5799999999976665544
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.18 Score=54.88 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=43.0
Q ss_pred EEEEecCCCcCCC-----CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccc
Q psy775 40 ALLLDYDGTLAPI-----APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGL 100 (1460)
Q Consensus 40 ~lFfDiDGTL~~~-----~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~ 100 (1460)
+++||+||+|++= ....+.....-.--.+|+.|+++ |++++|+|+++...+...+...++
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~-Gi~laIiT~k~~~~~~~~l~~lgi 73 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLC-GIDVAIITSKKSGAVRHRAEELKI 73 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHC-CCEEEEEECCCcHHHHHHHHHCCC
Confidence 7899999999983 11111223344457899999999 999999999987777666644333
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.34 Score=59.85 Aligned_cols=61 Identities=18% Similarity=0.113 Sum_probs=41.0
Q ss_pred cCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHH-HHHhcCCCceEEEEcCCChhhHHH---hcCCC
Q psy775 1391 GTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTL-QKLANLPDVHISIISGRNVHNVME---MVGIE 1455 (1460)
Q Consensus 1391 ~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L-~~La~~~~~~vAvvSGR~~~~l~~---~~~~~ 1455 (1460)
..++++++++|+||||.+=. +...+++....++ +++.++ ++.+++.|||+...+.+ .++++
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~-gi~fv~aTGR~~~~~~~l~~~~~l~ 69 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRH-DSLLVFSTGRSPTLYKELRKEKPLL 69 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcC-CeeEEEEcCCCHHHHHHHHHhCCCC
Confidence 45779999999999999531 1224554444444 766654 67899999999555554 45543
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.38 Score=52.01 Aligned_cols=47 Identities=26% Similarity=0.286 Sum_probs=36.2
Q ss_pred EEEEecCCCCCC------CCCCCCCcC-CChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP------IAPHPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~a~-~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
.+++|.||||.. ...+|++.. +-|++.++|++|.+. +..++|+|..+
T Consensus 15 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~ 68 (166)
T TIGR01664 15 VAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQS 68 (166)
T ss_pred EEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 577799999986 233566555 569999999999765 67999999644
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.51 E-value=0.35 Score=52.46 Aligned_cols=47 Identities=30% Similarity=0.314 Sum_probs=38.6
Q ss_pred EEEEecCCCCCCC--CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPI--APHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi--~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++++|-||||.+- ...++...+-|++.+.|+.|.+. +.+++|+|+.+
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~ 54 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQP 54 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 7999999999754 23345677889999999999876 67999999876
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.53 Score=55.07 Aligned_cols=55 Identities=20% Similarity=0.181 Sum_probs=44.9
Q ss_pred cEEEEEecCCCCCCCCC----CCC---CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH
Q psy775 1395 KLALLLDYDGTLAPIAP----HPD---MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME 1450 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~----~P~---~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~ 1450 (1460)
.-++.+|.||||..... ++. +..+.+++.++|++|.++ +..++|+|||+......
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~ 219 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEED 219 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHH
Confidence 45788999999999876 333 567889999999999876 67999999999876543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.31 Score=53.55 Aligned_cols=33 Identities=36% Similarity=0.532 Sum_probs=28.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLP 1433 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~ 1433 (1460)
++++||||||++ |+...+++.+.++|++|.+..
T Consensus 1 li~~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g 33 (204)
T TIGR01484 1 LLFFDLDGTLLD----PNAHELSPETIEALERLREAG 33 (204)
T ss_pred CEEEeCcCCCcC----CCCCcCCHHHHHHHHHHHHCC
Confidence 478999999997 333678999999999999875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.2 Score=54.79 Aligned_cols=57 Identities=19% Similarity=0.181 Sum_probs=37.4
Q ss_pred cEEEEEecCCCCCCC--CCCCCCcCCChhHH---HHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1395 KLALLLDYDGTLAPI--APHPDMAVLPEETK---RTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi--~~~P~~a~~~~~~~---~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
--++++|+||||..= -..++...+.+..+ .+++.|.++ ++.++|+|||+...+..++
T Consensus 21 ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~-Gi~v~I~T~~~~~~v~~~l 82 (183)
T PRK09484 21 IRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTS-GIEVAIITGRKSKLVEDRM 82 (183)
T ss_pred ceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHC-CCEEEEEeCCCcHHHHHHH
Confidence 337899999999962 12222233333333 567777654 6799999999987766653
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=89.83 E-value=0.28 Score=52.85 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=37.9
Q ss_pred EEEEecCCCCCC------CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1397 ALLLDYDGTLAP------IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
++|||.||||.. ....|+...+-|++.++|+.|.++ +.+++|+|-.
T Consensus 3 ~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 3 ILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred EEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 789999999987 234455667889999999999876 5689999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=89.70 E-value=0.44 Score=51.83 Aligned_cols=71 Identities=25% Similarity=0.320 Sum_probs=50.0
Q ss_pred cccccccCC--CChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCc-eEEEEeCC
Q psy775 11 NELFILKGM--GTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV-HISIISGR 86 (1460)
Q Consensus 11 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~-~v~IvTGR 86 (1460)
+.....||. .++.+++-....|.. ..=-++.||.|.||++ |....++++..+.++++++..+. .|+|+|.-
T Consensus 13 ~p~l~~P~l~V~si~~I~~~~~~Lk~-~Gik~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 13 NPSLLLPHLYVPSIRDIDFEANHLKK-KGIKALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred CccccCCCEEcCChhhCCcchhhhhh-cCceEEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 334556766 566666522211222 2233899999999997 56678999999999999998543 69999985
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=89.27 E-value=0.84 Score=53.11 Aligned_cols=52 Identities=29% Similarity=0.322 Sum_probs=40.2
Q ss_pred CCcEEEEEecCCCcCCC---------CCCC-------------CCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 36 TNKLALLLDYDGTLAPI---------APHP-------------DMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~---------~~~p-------------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
..+-++.||||+|+++- ...+ ..+..-|++++..+.++++ |+.|+++|||+-
T Consensus 99 ~~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~-G~kIf~VSgR~e 172 (275)
T TIGR01680 99 HEKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL-GFKIIFLSGRLK 172 (275)
T ss_pred CCCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC-CCEEEEEeCCch
Confidence 45679999999999941 1011 1455567899999999999 999999999984
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=89.13 E-value=4.7 Score=49.63 Aligned_cols=138 Identities=20% Similarity=0.272 Sum_probs=79.2
Q ss_pred EEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhc---------ccC
Q psy775 343 IVLGVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRING---------RFT 412 (1460)
Q Consensus 343 vIL~VgR-Ld~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~---------~fg 412 (1460)
+++.-.| =+-.++++..++|++++.++ |+ +.++....+.. .++.+++.+... .++. .|.
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~~----~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPSL----SLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCCC----CHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3455566 44557889999999998655 44 44554443332 223333333211 0000 000
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCc------hhc----cc
Q psy775 413 TPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGA------GEQ----MH 482 (1460)
Q Consensus 413 ~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGa------a~~----L~ 482 (1460)
. ..+.+. ....++..+|++||++|..| |.+..|+++++.| .|+--+.+. .+. ++
T Consensus 278 ~---~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-----~Ilip~~~~q~na~~~~~~~~l~g 341 (396)
T TIGR03492 278 K---GTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-----VIQLPGKGPQFTYGFAEAQSRLLG 341 (396)
T ss_pred c---CceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-----EEEEeCCCCHHHHHHHHhhHhhcC
Confidence 0 112222 12466889999999999986 3556999998544 344432121 111 13
Q ss_pred ccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 483 EALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 483 ~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
+++.+...+++.+++++.++|++++
T Consensus 342 ~~~~l~~~~~~~l~~~l~~ll~d~~ 366 (396)
T TIGR03492 342 GSVFLASKNPEQAAQVVRQLLADPE 366 (396)
T ss_pred CEEecCCCCHHHHHHHHHHHHcCHH
Confidence 5666666788999999999998643
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=88.69 E-value=0.7 Score=54.33 Aligned_cols=53 Identities=17% Similarity=0.155 Sum_probs=39.3
Q ss_pred EEEEEecCCCCCCCCCCCCCcCC-ChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1396 LALLLDYDGTLAPIAPHPDMAVL-PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~a~~-~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
-++++|+||||..=.. .+++ +|++.++|++|.+. |+.+||+|+.+.+.+...+
T Consensus 129 ~~i~~D~D~TL~~~~~---~v~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~L 182 (303)
T PHA03398 129 HVIVFDLDSTLITDEE---PVRIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSL 182 (303)
T ss_pred cEEEEecCCCccCCCC---ccccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 3789999999976422 2333 48999999999986 5799999976665544443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.27 E-value=0.94 Score=51.93 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=52.3
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCC---CC--------CCC------------------CCCcCCChhHHHH
Q psy775 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLA---PI--------APH------------------PDMAVLPEETKRT 1425 (1460)
Q Consensus 1375 ~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLa---pi--------~~~------------------P~~a~~~~~~~~~ 1425 (1460)
.|-+--+++++-..+ ...+++++.+|+|||+. |. .+. =..+.+-+++++.
T Consensus 44 ~~~~~~~~~~~~~~~-~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~el 122 (237)
T PRK11009 44 APVHWVSVAQIEKSL-EGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQL 122 (237)
T ss_pred CCeeEEEHHHhhhhc-cCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHH
Confidence 334444555554443 44457799999999999 41 000 0135566779999
Q ss_pred HHHHhcCCCceEEEEcCCC-------hhhHHHhcCCC
Q psy775 1426 LQKLANLPDVHISIISGRN-------VHNVMEMVGIE 1455 (1460)
Q Consensus 1426 L~~La~~~~~~vAvvSGR~-------~~~l~~~~~~~ 1455 (1460)
|+.|.++ +..+++||||+ ...+.+.+|+|
T Consensus 123 L~~L~~~-G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 123 IDMHVKR-GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHC-CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 9999765 57999999996 34555566773
|
|
| >KOG3189|consensus | Back alignment and domain information |
|---|
Probab=87.68 E-value=0.95 Score=49.93 Aligned_cols=58 Identities=28% Similarity=0.367 Sum_probs=49.1
Q ss_pred cCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCC
Q psy775 1391 GTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE 1455 (1460)
Q Consensus 1391 ~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~ 1455 (1460)
++.++.++.+|.||||+|- ...++|++.+.|+.|-.+. .+.+|-|-+++.+.+-+|.+
T Consensus 7 ~r~~~~l~lfdvdgtLt~~-----r~~~~~e~~~~l~~lr~~v--~ig~VggsDl~k~~eqlG~~ 64 (252)
T KOG3189|consen 7 ARDEETLCLFDVDGTLTPP-----RQKVTPEMLEFLQKLRKKV--TIGFVGGSDLSKQQEQLGDN 64 (252)
T ss_pred hcCCceEEEEecCCccccc-----cccCCHHHHHHHHHHhhhe--EEEEeecHHHHHHHHHhchh
Confidence 3456788999999999863 5778999999999998875 78999999999999888643
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=87.55 E-value=0.89 Score=50.40 Aligned_cols=13 Identities=38% Similarity=0.593 Sum_probs=10.6
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 4 ~viFDlDGTL~ds 16 (221)
T TIGR02253 4 AIFFDLDDTLIDT 16 (221)
T ss_pred EEEEeCCCCCcCC
Confidence 6789999998873
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >KOG2941|consensus | Back alignment and domain information |
|---|
Probab=87.47 E-value=6.7 Score=46.96 Aligned_cols=137 Identities=12% Similarity=0.221 Sum_probs=93.9
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHh-------CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-------HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRF 411 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~-------~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~f 411 (1460)
...+++++--.+.|-..+.-+|+|...+-++ +|. ++ .+|. |.+|..+.+.++|++.
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----ll-ciIT----GKGPlkE~Y~~~I~~~-------- 315 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----LL-CIIT----GKGPLKEKYSQEIHEK-------- 315 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----EE-EEEc----CCCchhHHHHHHHHHh--------
Confidence 4467889999999999999999999855221 233 22 2233 3445555566665542
Q ss_pred CCCCcccEEEEcCCCCHHHHHHHHHhccEEEE--ccCCCCCCccee--eeeeeccCCCCCeEEEcCCCCchhcc-c---c
Q psy775 412 TTPNWSPIRYIYGCISQDELASFYRDAAVALV--TPLRDGMNLVAK--EFVACQINEPPGVLIVSPFAGAGEQM-H---E 483 (1460)
Q Consensus 412 g~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv--pSlrEGfnLVal--EamAcq~~~~~GvlVlSe~aGaa~~L-~---~ 483 (1460)
+|..|.+..-.+.-++++.++..||..|+ || .-|.-|+.+ .-..| +-|+++-.|. +..+| . .
T Consensus 316 ---~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc-----glPvcA~~fk-cl~ELVkh~eN 385 (444)
T KOG2941|consen 316 ---NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC-----GLPVCAVNFK-CLDELVKHGEN 385 (444)
T ss_pred ---cccceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC-----CCceeeecch-hHHHHHhcCCC
Confidence 46678888888999999999999998774 33 346655543 33345 3344555664 55555 2 3
Q ss_pred cEEECCCCHHHHHHHHHHHcC
Q psy775 484 ALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 484 allVNP~D~~elA~AI~~aL~ 504 (1460)
|++++ |.+++|+.|..+.+
T Consensus 386 GlvF~--Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 386 GLVFE--DSEELAEQLQMLFK 404 (444)
T ss_pred ceEec--cHHHHHHHHHHHHh
Confidence 99996 89999999998877
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=87.46 E-value=0.87 Score=49.83 Aligned_cols=55 Identities=22% Similarity=0.212 Sum_probs=41.3
Q ss_pred EEEEecCCCcCCCCC-----------C----------CCCccCChhHHHHHHHHhcCCCceEEEEeCC-chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAP-----------H----------PDMAVLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~-----------~----------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR-~~~~l~~~l 95 (1460)
++.||.||||..+.. + -....+.|++.+.|+.|+++ |++++|+|+. +...+...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~-G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 4 VIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA-GTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred EEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC-CCEEEEEeCCCChHHHHHHH
Confidence 788999999986321 1 11256678999999999999 9999999988 655544444
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=87.31 E-value=0.65 Score=48.54 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=25.2
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+++.+.|+.|+++ |++++|+|+++...+...+
T Consensus 66 ~~g~~e~l~~L~~~-g~~~~i~T~~~~~~~~~~~ 98 (154)
T TIGR01549 66 IRGAADLLKRLKEA-GIKLGIISNGSLRAQKLLL 98 (154)
T ss_pred ccCHHHHHHHHHHC-cCeEEEEeCCchHHHHHHH
Confidence 36788889999888 8899999988766654443
|
HAD subfamilies caused by an overly broad single model. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.23 E-value=0.64 Score=54.19 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=35.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
+++||+||||.. ....-|++.++|++|+++ |.++.++|..+
T Consensus 10 ~~l~DlDGvl~~------G~~~ipga~e~l~~L~~~-g~~~iflTNn~ 50 (269)
T COG0647 10 GFLFDLDGVLYR------GNEAIPGAAEALKRLKAA-GKPVIFLTNNS 50 (269)
T ss_pred EEEEcCcCceEe------CCccCchHHHHHHHHHHc-CCeEEEEeCCC
Confidence 589999999984 234567999999999999 99999999765
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.19 E-value=1.5 Score=52.05 Aligned_cols=57 Identities=25% Similarity=0.374 Sum_probs=43.3
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1375 ~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++-...++.+.+..+ + +++||.||||..= ..+.|++.++|++|.++ +.+++++|+|+
T Consensus 14 ~~~~~~~~~~~~~~~----~--~~~~D~DGtl~~~------~~~~~ga~e~l~~lr~~-g~~~~~~TN~~ 70 (311)
T PLN02645 14 QLLTLENADELIDSV----E--TFIFDCDGVIWKG------DKLIEGVPETLDMLRSM-GKKLVFVTNNS 70 (311)
T ss_pred ccCCHHHHHHHHHhC----C--EEEEeCcCCeEeC------CccCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 445556677766653 2 7899999999752 13457889999999876 67999999999
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=87.12 E-value=0.97 Score=50.59 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=18.3
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVME 93 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~ 93 (1460)
.+.|++.+.|+.|+++ |++++|+||-....+..
T Consensus 74 ~l~pG~~e~l~~l~~~-g~~~~IvS~~~~~~i~~ 106 (219)
T PRK09552 74 EIREGFHEFVQFVKEN-NIPFYVVSGGMDFFVYP 106 (219)
T ss_pred CcCcCHHHHHHHHHHc-CCeEEEECCCcHHHHHH
Confidence 3445555666666665 66666666655433433
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=87.10 E-value=1.2 Score=51.89 Aligned_cols=64 Identities=27% Similarity=0.278 Sum_probs=45.2
Q ss_pred hhHHHHHHHhhcCCCcEEEEEecCCCCCCCCC---------CC------------CCcCCChhHHHHHHHHhcCCCceEE
Q psy775 1380 EDFDEYLSKYIGTTNKLALLLDYDGTLAPIAP---------HP------------DMAVLPEETKRTLQKLANLPDVHIS 1438 (1460)
Q Consensus 1380 ~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~---------~P------------~~a~~~~~~~~~L~~La~~~~~~vA 1438 (1460)
..+++++.. ...++.++.||+|+|+..-.+ .| ..+.+-|++.+.|+.|.++ ++.++
T Consensus 62 ~~~~~~~~~--~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~ 138 (266)
T TIGR01533 62 MRLDNNLKK--VKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIF 138 (266)
T ss_pred HHHHHHHhc--cCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEE
Confidence 445555543 235678999999999964221 11 2355678899999999876 57999
Q ss_pred EEcCCChh
Q psy775 1439 IISGRNVH 1446 (1460)
Q Consensus 1439 vvSGR~~~ 1446 (1460)
+||+|+..
T Consensus 139 iVTnR~~~ 146 (266)
T TIGR01533 139 YVSNRSEK 146 (266)
T ss_pred EEeCCCcc
Confidence 99999843
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.91 E-value=0.56 Score=51.56 Aligned_cols=48 Identities=23% Similarity=0.232 Sum_probs=38.8
Q ss_pred cEEEEEecCCCcCCCCC----CCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 38 KLALLLDYDGTLAPIAP----HPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~----~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
.-++|+|=||||..-.. .++.-...+++.+||.+|++. |++++|+|.-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~-gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA-GYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC-CCeEEEEECC
Confidence 45899999999985332 234556778999999999988 9999999973
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.51 E-value=1.5 Score=47.43 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=42.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+++|+|-||++.. +...+|++++=+..++++ |.+++|+|.-+..-+....
T Consensus 30 gvi~DlDNTLv~wd----~~~~tpe~~~W~~e~k~~-gi~v~vvSNn~e~RV~~~~ 80 (175)
T COG2179 30 GVILDLDNTLVPWD----NPDATPELRAWLAELKEA-GIKVVVVSNNKESRVARAA 80 (175)
T ss_pred EEEEeccCceeccc----CCCCCHHHHHHHHHHHhc-CCEEEEEeCCCHHHHHhhh
Confidence 89999999999983 446899999999999999 9999999996654444333
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=86.32 E-value=33 Score=41.56 Aligned_cols=73 Identities=16% Similarity=0.266 Sum_probs=49.5
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCc----hhcc---cccEEECCC--
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGA----GEQM---HEALICNPY-- 490 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGa----a~~L---~~allVNP~-- 490 (1460)
+.+.+.+++.++ +..||++|- .-|+| +..|+++++.| +|+--..+- +..+ +-|+.+++.
T Consensus 290 v~~~~~~p~~~l---l~~~d~~I~---hgG~~-t~~eal~~GvP-----~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~ 357 (401)
T cd03784 290 VRVVDFVPHDWL---LPRCAAVVH---HGGAG-TTAAALRAGVP-----QLVVPFFGDQPFWAARVAELGAGPALDPREL 357 (401)
T ss_pred eEEeCCCCHHHH---hhhhheeee---cCCch-hHHHHHHcCCC-----EEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence 345577887665 788999994 66765 67999999544 455544431 2222 226666655
Q ss_pred CHHHHHHHHHHHcC
Q psy775 491 EIDAAAEVIHRALT 504 (1460)
Q Consensus 491 D~~elA~AI~~aL~ 504 (1460)
+.+++++++.++|+
T Consensus 358 ~~~~l~~al~~~l~ 371 (401)
T cd03784 358 TAERLAAALRRLLD 371 (401)
T ss_pred CHHHHHHHHHHHhC
Confidence 68999999999998
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=86.31 E-value=0.76 Score=49.43 Aligned_cols=44 Identities=27% Similarity=0.468 Sum_probs=33.2
Q ss_pred EEEEecCCCCCC------CCCCCCC-cCCChhHHHHHHHHhcCCCceEEEEc
Q psy775 1397 ALLLDYDGTLAP------IAPHPDM-AVLPEETKRTLQKLANLPDVHISIIS 1441 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~-a~~~~~~~~~L~~La~~~~~~vAvvS 1441 (1460)
.++||+||||.. +..+|++ ...++++.++|++|.+. +..++|||
T Consensus 2 ia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvT 52 (159)
T PF08645_consen 2 IAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVT 52 (159)
T ss_dssp EEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEE
T ss_pred EEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEe
Confidence 478999999975 4456777 45677899999999775 67899998
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=86.30 E-value=1.5 Score=46.37 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=41.3
Q ss_pred cEEEEEecCCCcCCCCC--CCCCc-------------------cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 38 KLALLLDYDGTLAPIAP--HPDMA-------------------VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~--~p~~a-------------------~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+..+.+|+||||+.... .++.. .+-|++.+.|..|+ + ++.++|+|+.+...+...+
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~-~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E-LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h-ccEEEEEeCCcHHHHHHHH
Confidence 46899999999998631 11111 34678999999998 4 6899999998876655544
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=86.17 E-value=1.1 Score=50.64 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=23.6
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+-|++.+.|+.|+++ |++++|+|+-+...+...+
T Consensus 94 ~~~g~~e~L~~Lk~~-g~~~~i~Tn~~~~~~~~~l 127 (224)
T PRK14988 94 LREDTVPFLEALKAS-GKRRILLTNAHPHNLAVKL 127 (224)
T ss_pred cCCCHHHHHHHHHhC-CCeEEEEeCcCHHHHHHHH
Confidence 456778888888887 8888888886554444333
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=86.05 E-value=65 Score=39.30 Aligned_cols=72 Identities=8% Similarity=0.147 Sum_probs=49.2
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc--ccc-EEECCCCHHHHH
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM--HEA-LICNPYEIDAAA 496 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L--~~a-llVNP~D~~elA 496 (1460)
+.+.++++..++.+|++.|++++-.|- =|+ .||.+.++|. +.+. .-.+.+ +.. ++| +.|++++.
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~Pv----v~l~---~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVPT----INIG---TRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCCE----Eeec---CCchhhhhcCeEEEe-CCCHHHHH
Confidence 456699999999999999999996552 122 7999985442 2222 222222 223 457 66999999
Q ss_pred HHHHHHcC
Q psy775 497 EVIHRALT 504 (1460)
Q Consensus 497 ~AI~~aL~ 504 (1460)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=86.04 E-value=0.93 Score=54.09 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=35.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcC---CCceEEEEe---CCchhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANL---PDVHISIIS---GRNVHNVME 93 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~---~g~~v~IvT---GR~~~~l~~ 93 (1460)
+++||+||||+.- ..+-+++.++++.|+++ .|.++.++| |++.....+
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 6899999999852 23478999999999985 367778777 444555433
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=85.88 E-value=0.86 Score=52.62 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=36.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 1447 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~ 1447 (1460)
+++||.||||..-.. + .-.+.|++.++|++|.++ +.+++++|||+...
T Consensus 3 ~i~~D~DGtl~~~~~-~-~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 3 GVLLDISGVLYISDA-K-SGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred EEEEeCCCeEEeCCC-c-ccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 688999999974311 0 012577999999999876 67999999977664
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=85.77 E-value=1.4 Score=47.67 Aligned_cols=43 Identities=21% Similarity=0.216 Sum_probs=36.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++++|+||||.+- +...+.|++.++|+.|.+. +..++|+|+.+
T Consensus 27 ~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~ 69 (170)
T TIGR01668 27 GVVLDKDNTLVYP----DHNEAYPALRDWIEELKAA-GRKLLIVSNNA 69 (170)
T ss_pred EEEEecCCccccC----CCCCcChhHHHHHHHHHHc-CCEEEEEeCCc
Confidence 7899999999854 3456788999999999766 46999999988
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.56 E-value=0.93 Score=54.89 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=40.1
Q ss_pred EEEEecCCCCCCC------CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1397 ALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1397 ~l~lD~DGTLapi------~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
++|||+||||..- +..|+...+.|++.++|..|.+. +.+++|+|..
T Consensus 4 ~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~-G~kL~IvTNq 55 (354)
T PRK05446 4 ILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA-GYKLVMVTNQ 55 (354)
T ss_pred EEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC-CCeEEEEECC
Confidence 7999999999984 56778899999999999999654 6799999984
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=83.65 E-value=1 Score=48.81 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=38.2
Q ss_pred EEEEecCCCCCC----CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP----IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||-||||.- ....+....+-|++.++|++|.+. +.++||+|..+
T Consensus 5 ~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 5 AIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred EEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 689999999843 334456677889999999999886 67999999876
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=83.44 E-value=1.6 Score=52.00 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=43.6
Q ss_pred EEEEecCCCcCCCCCCCC------CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPHPD------MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~------~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
++++|.|+||..-+-..+ -..+.+++.+.|.+|+++ |+.++|||..+...+.+.+.
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~-Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ-GFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHH
Confidence 788999999998542111 112457899999999999 99999999998777766653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.34 E-value=1.2 Score=48.80 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=21.4
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.|++.+.|+.|+++ ++++|+||.....+...+
T Consensus 70 ~pg~~e~L~~L~~~--~~~~IvS~~~~~~~~~~l 101 (205)
T PRK13582 70 LPGAVEFLDWLRER--FQVVILSDTFYEFAGPLM 101 (205)
T ss_pred CCCHHHHHHHHHhc--CCEEEEeCCcHHHHHHHH
Confidence 46667777777776 577788887655554443
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=83.06 E-value=1.6 Score=47.70 Aligned_cols=56 Identities=21% Similarity=0.221 Sum_probs=34.6
Q ss_pred EEEEecCCCcCCCCCC--------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCc-hhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPH--------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRN-VHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~--------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~-~~~l~~~l~ 96 (1460)
++.||.|+||.|+-.+ -+...+-|.+..+|+.|+++ |++++++|==+ ++-+++.+.
T Consensus 5 lvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~-gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 5 LVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER-GVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp EEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC-T--EEEEE--S-HHHHHHHHH
T ss_pred EEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC-CCEEEEEECCCChHHHHHHHH
Confidence 7899999999985322 12334668899999999998 99999999432 334445443
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.37 E-value=1.4 Score=48.28 Aligned_cols=37 Identities=14% Similarity=0.022 Sum_probs=28.4
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
.+.|++.+.|+.|.+. ++++|+||.....+... +|++
T Consensus 68 ~~~pg~~e~L~~L~~~--~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 68 DPLPGAVEFLDWLRER--FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCCHHHHHHHHHhc--CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 3457788899999876 48999999998866655 5554
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=82.18 E-value=2.5 Score=47.27 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=27.3
Q ss_pred cCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1416 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1416 a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+.+.|++.+.|+.|.++ +.+++||||-...-+...+
T Consensus 73 ~~l~pG~~e~l~~l~~~-g~~~~IvS~~~~~~i~~il 108 (219)
T PRK09552 73 AEIREGFHEFVQFVKEN-NIPFYVVSGGMDFFVYPLL 108 (219)
T ss_pred CCcCcCHHHHHHHHHHc-CCeEEEECCCcHHHHHHHH
Confidence 45667788888887654 6799999999887776654
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=82.01 E-value=39 Score=41.40 Aligned_cols=232 Identities=14% Similarity=0.077 Sum_probs=117.1
Q ss_pred CCCEEEEeCcc--hhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYH--LMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYh--L~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
+.|++..=||- =+.|...||+. +|+.+|..+.- |.+|.==|.|...+.. .+|++---.+--.. |.+
T Consensus 85 kpD~~i~IDsPdFnl~vak~lrk~----~p~i~iihYV~-----PsVWAWr~~Ra~~i~~--~~D~lLailPFE~~-~y~ 152 (381)
T COG0763 85 KPDVLILIDSPDFNLRVAKKLRKA----GPKIKIIHYVS-----PSVWAWRPKRAVKIAK--YVDHLLAILPFEPA-FYD 152 (381)
T ss_pred CCCEEEEeCCCCCchHHHHHHHHh----CCCCCeEEEEC-----cceeeechhhHHHHHH--HhhHeeeecCCCHH-HHH
Confidence 46777776654 25677888875 45788876654 5566555566443333 25655432221111 111
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc--cC-CeEEEEec--CccccCCHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID--TK-QKIVLGVD--RLDYTKGLVHRLKAF 363 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~--~~-~kvIL~Vg--RLd~~KGI~~lL~Af 363 (1460)
+.+.-..|-||+. .|.-.+.+..+.+++... .+ +.+.+--| |=+-..-++-.++|+
T Consensus 153 -----------k~g~~~~yVGHpl--------~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~ 213 (381)
T COG0763 153 -----------KFGLPCTYVGHPL--------ADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAA 213 (381)
T ss_pred -----------hcCCCeEEeCChh--------hhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHH
Confidence 1111123434432 221112111111122221 23 33333322 333445567778888
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
+++.+++|+.+ ++.-..+ +.|+.++.+.... -.. .+..++ ...+-...+.+||+.+.
T Consensus 214 ~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~~---~~~-------~~~~~~----~~~~~~~a~~~aD~al~ 270 (381)
T COG0763 214 QELKARYPDLK----FVLPLVN-----AKYRRIIEEALKW---EVA-------GLSLIL----IDGEKRKAFAAADAALA 270 (381)
T ss_pred HHHHhhCCCce----EEEecCc-----HHHHHHHHHHhhc---ccc-------CceEEe----cCchHHHHHHHhhHHHH
Confidence 89988999975 3222212 2333333332211 000 011222 23444567999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCC-----------------CCchhcccccEEEC-----CCCHHHHHHHHHH
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPF-----------------AGAGEQMHEALICN-----PYEIDAAAEVIHR 501 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~-----------------aGaa~~L~~allVN-----P~D~~elA~AI~~ 501 (1460)
.| |.+.+|++.|++| .|++=- .+....+.+-.+|+ ---++.+|+++..
T Consensus 271 aS-----GT~tLE~aL~g~P-----~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ 340 (381)
T COG0763 271 AS-----GTATLEAALAGTP-----MVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEE 340 (381)
T ss_pred hc-----cHHHHHHHHhCCC-----EEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHH
Confidence 99 8999999999655 344322 22222222212221 0236899999999
Q ss_pred HcCCC
Q psy775 502 ALTMP 506 (1460)
Q Consensus 502 aL~m~ 506 (1460)
.+..+
T Consensus 341 ll~~~ 345 (381)
T COG0763 341 LLLNG 345 (381)
T ss_pred HhcCh
Confidence 99876
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=81.90 E-value=1.6 Score=50.89 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=32.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++++|.||||..= ..+-|++.++|++|.+. +.+++++|||+
T Consensus 4 ~~~~D~DGtl~~~------~~~~~ga~e~l~~L~~~-g~~~~~~Tnns 44 (279)
T TIGR01452 4 GFIFDCDGVLWLG------ERVVPGAPELLDRLARA-GKAALFVTNNS 44 (279)
T ss_pred EEEEeCCCceEcC------CeeCcCHHHHHHHHHHC-CCeEEEEeCCC
Confidence 6889999999551 22455689999999876 57999999976
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=81.10 E-value=65 Score=39.69 Aligned_cols=240 Identities=15% Similarity=0.146 Sum_probs=123.4
Q ss_pred CCCEEEEeCcch--hHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHL--MLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL--~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
+.|+|..=||.= +-++..+|++ |++.+|.++.- |.+|.==++|...++.. +|++--- +.+-..|.+
T Consensus 82 ~pd~vIlID~pgFNlrlak~lk~~----~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll~i-fPFE~~~y~ 149 (373)
T PF02684_consen 82 KPDVVILIDYPGFNLRLAKKLKKR----GIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLLVI-FPFEPEFYK 149 (373)
T ss_pred CCCEEEEeCCCCccHHHHHHHHHh----CCCceEEEEEC-----CceeeeCccHHHHHHHH--HhheeEC-CcccHHHHh
Confidence 467777777652 5667788864 44566765543 56665556776666653 4443211 111122222
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeE--EEEecCccccCCH-HHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKI--VLGVDRLDYTKGL-VHRLKAFET 365 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kv--IL~VgRLd~~KGI-~~lL~Af~~ 365 (1460)
..+.-..|-||+.-=.+ +..-+..... ......++++ ++-=+|-...+-+ +..++|.++
T Consensus 150 -----------~~g~~~~~VGHPl~d~~-~~~~~~~~~~------~~~l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~ 211 (373)
T PF02684_consen 150 -----------KHGVPVTYVGHPLLDEV-KPEPDRAEAR------EKLLDPDKPIIALLPGSRKSEIKRLLPIFLEAAKL 211 (373)
T ss_pred -----------ccCCCeEEECCcchhhh-ccCCCHHHHH------HhcCCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 11112344454431111 1100100000 0111133333 3345666655544 888999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|+++ ++....+. .+. +.+++.....+.. .++... ..+-..++++||+.+++|
T Consensus 212 l~~~~p~l~----fvvp~a~~-----~~~---~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~al~~S 268 (373)
T PF02684_consen 212 LKKQRPDLQ----FVVPVAPE-----VHE---ELIEEILAEYPPD------VSIVII-----EGESYDAMAAADAALAAS 268 (373)
T ss_pred HHHhCCCeE----EEEecCCH-----HHH---HHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcchhhcC
Confidence 999999863 43333221 111 1222222222211 122222 234557799999999999
Q ss_pred CCCCCCcceeeeeeeccCC----C--------CCeEEEcCCCCchhccccc-----EEECCCCHHHHHHHHHHHcCCCHH
Q psy775 446 LRDGMNLVAKEFVACQINE----P--------PGVLIVSPFAGAGEQMHEA-----LICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~----~--------~GvlVlSe~aGaa~~L~~a-----llVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
|.+.+|++..+.|. + .-.+|=..+.|....+.+- ++-+-.+++.+++++.+.|+.++.
T Consensus 269 -----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 269 -----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred -----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHH
Confidence 89999999886662 0 0011223344444444331 223345789999999999997655
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=81.06 E-value=2.9 Score=52.80 Aligned_cols=46 Identities=9% Similarity=-0.031 Sum_probs=33.7
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc--cceeEccCC
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE--GLTYAGNHG 107 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~--~~~~ig~hG 107 (1460)
..|++.+.|++++++ |++++|+|+.+...+....... ....+|+++
T Consensus 73 ~~pga~e~L~~lk~~-G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERAA-GRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 458999999999999 9999999998876665544322 234455544
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=80.89 E-value=21 Score=43.96 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=59.8
Q ss_pred EEEEEcC-ccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCC------CC
Q psy775 743 IVLGVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT------PN 815 (1460)
Q Consensus 743 iIl~VdR-Ld~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~------~~ 815 (1460)
+++.-.| =+-.++++..++|.+++.++ |+ +.++..+.+.. +++.+++.+. +.+-.... ..
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~~----~~~~~~~~l~----~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPSL----SLEKLQAILE----DLGWQLEGSSEDQTSL 275 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCCC----CHHHHHHHHH----hcCceecCCccccchh
Confidence 3455566 35667889999999998655 54 45554443331 2223333332 11110000 00
Q ss_pred C--ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 W--SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~--~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
| ..+.+.. ...+...+|+.||++|..| |-+..|++++ +.|.|+-.+.
T Consensus 276 ~~~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~l-----g~P~Ilip~~ 324 (396)
T TIGR03492 276 FQKGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGL-----GKPVIQLPGK 324 (396)
T ss_pred hccCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHh-----CCCEEEEeCC
Confidence 0 1122221 2457889999999999986 3566999888 5566776653
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=80.68 E-value=3.6 Score=44.90 Aligned_cols=59 Identities=29% Similarity=0.380 Sum_probs=47.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCc-eEEEEcCCC----------hhhHHHhcCCCCccc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV-HISIISGRN----------VHNVMEMVGIEGLTY 1459 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~-~vAvvSGR~----------~~~l~~~~~~~~~~y 1459 (1460)
++.||+|.||++ |....++|+..+.++++.+.++. .|.|||=-. ++.+.+-+|++-+.|
T Consensus 43 ~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h 112 (168)
T PF09419_consen 43 ALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRH 112 (168)
T ss_pred EEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEe
Confidence 789999999986 67788999999999999988753 599999653 555777788775443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=80.01 E-value=17 Score=45.85 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=59.4
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCccc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~p 418 (1460)
.+..++.+..+ ..|=-+..++.+.++|++-|+.+ |+....+. ..+ +.+++.+. +. |-. -.-
T Consensus 283 ~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~--~~l~~~~~----~~----Gv~-~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNN--LFKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE--ARLRRRFA----AH----GVD-PDR 343 (468)
T ss_dssp SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH--HHHHHHHH----HT----TS--GGG
T ss_pred CCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH--HHHHHHHH----Hc----CCC-hhh
Confidence 44444445555 45678999999999999999863 44444332 111 23333322 21 211 123
Q ss_pred EEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 419 Iv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
++ |.+..+.++....|+.+||++-|..+-| +.+.+||++. |++|+|-.
T Consensus 344 i~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm------GVPvVTl~ 391 (468)
T PF13844_consen 344 II-FSPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM------GVPVVTLP 391 (468)
T ss_dssp EE-EEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH------T--EEB--
T ss_pred EE-EcCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc------CCCEEecc
Confidence 55 4567788999999999999999988777 4578899988 55565543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1460 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 7e-65 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 8e-52 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-10 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 9e-65 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 9e-52 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 1e-10 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 3e-63 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 5e-51 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 1e-10 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 5e-18 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 1e-12 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 1e-07 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 5e-18 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 1e-12 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 1e-07 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 5e-16 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 9e-11 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 3e-06 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 563 bits (1454), Expect = 0.0
Identities = 142/384 (36%), Positives = 200/384 (52%), Gaps = 22/384 (5%)
Query: 144 VHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILA 203
++ + D YYN N WP FH D F W Y +VN ADK + LQ
Sbjct: 66 FNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQ--- 122
Query: 204 QEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSD 263
D ++WIHDYHL+ A+ +R ++ + ++GFFLHIPFP +IF P D
Sbjct: 123 ---DDD----IIWIHDYHLLPFAHELR----KRGVNNRIGFFLHIPFPTPEIFNALPTYD 171
Query: 264 EILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPY 323
+L+ + D++GF E+ L F+DC G+ R PI I
Sbjct: 172 TLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKS-HTAWGKAFRTEVYPIGIEP 230
Query: 324 ERFVQLAQAA--PRVIDTKQ-----KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376
+ + A P++ K + + V+RLDY+KGL R A+E LLEK+P+H K
Sbjct: 231 KEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGK 290
Query: 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 436
+ QIA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L +R
Sbjct: 291 IRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFR 350
Query: 437 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 496
+ V LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A
Sbjct: 351 YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVA 410
Query: 497 EVIHRALTMPEDERTLRMNYLRKR 520
+ RALTM ER R +
Sbjct: 411 AALDRALTMSLAERISRHAEMLDV 434
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 485 bits (1250), Expect = e-158
Identities = 132/465 (28%), Positives = 197/465 (42%), Gaps = 109/465 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
Y +VN ADK + LQ D ++WIHDYHL+ A+ +R ++ + ++
Sbjct: 105 GYLRVNALLADKLLPLLQ------DDD----IIWIHDYHLLPFAHELR----KRGVNNRI 150
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +IF P D +L+ + D++GF E+ L F+DC
Sbjct: 151 GFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK 210
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
G+ R PI I + + A K+ ++
Sbjct: 211 S-HTAWGKAFRTEVYPIGIEPKEIAKQAAG-----PLPPKL--------------AQLKA 250
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+ + + V+RLDY+KGL R A+E LLEK+P+H K+
Sbjct: 251 ELK-------------------NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKI 291
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
QIA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L +R
Sbjct: 292 RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 351
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
+ V LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A
Sbjct: 352 SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAA 411
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
+ A
Sbjct: 412 AL--------------------------------------DRA----------------- 416
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGD 1002
LTM ER R + +D+N+W F+ + ++ +
Sbjct: 417 -LTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAE 460
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 6e-48
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
++ + ++GFFLHIPFP +IF P D +L+ + D++GF E+ L F+DC
Sbjct: 143 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLT 202
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA--PRVIDTKQ-----KIVLGV 1181
G+ R PI I + + A P++ K + + V
Sbjct: 203 RVTTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSV 261
Query: 1182 DRLDYTKGLVHRNELFILKGMGTLITE 1208
+RLDY+KGL R L+ +
Sbjct: 262 ERLDYSKGLPER-----FLAYEALLEK 283
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 526 bits (1356), Expect = e-173
Identities = 99/420 (23%), Positives = 156/420 (37%), Gaps = 34/420 (8%)
Query: 115 GSRFVHPIPTEFEDKVSDLLKTLQE-KVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDR 173
S D V+ L + +E V + DP +F + N W + DR
Sbjct: 54 DSEDDRRASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDR 113
Query: 174 AM------FCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAAN 227
E W + + ++FAD + + A S P+ +HDY L+
Sbjct: 114 WTQPSFGSDAREGWADFGRFTRDFADAIL--------KSSAQSADPVYLVHDYQLVGVPA 165
Query: 228 TIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP--WSDEILQGMLGCDMVGFHIEDYCLN 285
+R EQ + F+HIP+P D +R+ P IL GML +GF + +C N
Sbjct: 166 LLR----EQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRN 221
Query: 286 FVDCCQRRLG-CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK---Q 341
F++ L R+DR+ + VE G R+R +P+ P I+
Sbjct: 222 FLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGH 281
Query: 342 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMD 401
++V+ R D K ++AF +L LEK +L P+R V D ++
Sbjct: 282 RLVVHSGRTDPIKNAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVE 339
Query: 402 QLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQ 461
V N + I + + +R A + + DG NL E
Sbjct: 340 TAVAEANAELGS----DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVN 395
Query: 462 INEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
E +I+S GA E + E NP+++ AE I AL +R R
Sbjct: 396 --ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDA 453
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 449 bits (1158), Expect = e-144
Identities = 87/467 (18%), Positives = 147/467 (31%), Gaps = 122/467 (26%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
+ + ++FAD + + A S P+ +HDY L+ +R EQ +
Sbjct: 129 DFGRFTRDFADAIL--------KSSAQSADPVYLVHDYQLVGVPALLR----EQRPDAPI 176
Query: 598 GFFLHIPFPPWDIFRLFP--WSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG-CRVD 654
F+HIP+P D +R+ P IL GML +GF + +C NF++ L R+D
Sbjct: 177 LLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARID 236
Query: 655 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIES 714
R+ + VE G R+R +P+ P++ + ++ G
Sbjct: 237 REAMTVEWRGHRTRLRTMPLGYSPLTL---DGRNPQLPEGIEEWADG------------- 280
Query: 715 IRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL 774
++V+ R D K ++AF +L L
Sbjct: 281 --------------------------HRLVVHSGRTDPIKNAERAVRAF--VLAARGGGL 312
Query: 775 EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834
EK +L P+R V D ++ V N + I + +
Sbjct: 313 EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS----DTVRIDNDNDVNHTIAC 368
Query: 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEID 893
+R A + + DG NL E E +I+S GA E + E NP+++
Sbjct: 369 FRRADLLIFNSTVDGQNLSTFEAPLVN--ERDADVILSETCGAAEVLGEYCRSVNPFDLV 426
Query: 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 953
AE I A
Sbjct: 427 EQAEAI--------------------------------------SAA------------- 435
Query: 954 VIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITED 1000
L +R R + + W+++ L G+
Sbjct: 436 -----LAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAAR 477
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 1e-46
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFP--WSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 1126
EQ + F+HIP+P D +R+ P IL GML +GF + +C NF++
Sbjct: 169 EQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVAD 228
Query: 1127 RLG-CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK---QKIVLGVD 1182
L R+DR+ + VE G R+R +P+ P I+ ++V+
Sbjct: 229 LLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRLVVHSG 288
Query: 1183 RLDYTKGLVHR 1193
R D K
Sbjct: 289 RTDPIKNAERA 299
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 1e-27
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG 99
+ LDYDGTL PI +P+ + + L D + I++GR+ + + ++
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTY--IVTGRSPEEISRFLPLD- 59
Query: 100 LTYAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKV 141
+ HG +G + F + + + V
Sbjct: 60 INMICYHGAC-SKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG 1456
+ LDYDGTL PI +P+ + + L D + I++GR+ + + ++
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTY--IVTGRSPEEISRFLPLD- 59
Query: 1457 LTYA 1460
+
Sbjct: 60 INMI 63
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 3e-12
Identities = 83/551 (15%), Positives = 149/551 (27%), Gaps = 185/551 (33%)
Query: 945 PYEIDAAAEVIHRALTMPEDERTLRM--NYLRKREK--------VHDVNY-WMRSFLKGM 993
P I + E+ H ++ TLR+ L K+E+ V +NY ++ S +K
Sbjct: 42 PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK-- 99
Query: 994 GTLITEDGDDVLPTTLIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGKASL 1053
TE + T + ++++ + F +++ RL L+
Sbjct: 100 ----TEQRQPSMMTRMYIEQRDRLYNDN----QVFAKYNVSRL----QPYLK-------- 139
Query: 1054 GLLSWLCNTIKNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGC------- 1106
L L L+ + G+LG
Sbjct: 140 -LRQAL----------LELRPAKNVLID--------------------GVLGSGKTWVAL 168
Query: 1107 ---------DMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPY 1157
+ F I + LN +C ++ L+ R +
Sbjct: 169 DVCLSYKVQCKMDFKI--FWLNLKNCNSPET--VLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 1158 ERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRNELFILKGMGTLITEDGDDVLPTT 1217
R + R++ +K + N L +L +V
Sbjct: 225 LRIHSIQAELRRLLKSKP----------------YENCLLVL-----------LNV---- 253
Query: 1218 MQPVTLEDFDEYLSKNELFILKGMGTLITEDG---DDVLPTTMQPVTLEDFDEYLSKNE- 1273
F+ K IL L T D + T ++L+ L+ +E
Sbjct: 254 QNAKAWNAFN-LSCK----IL-----LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 1274 --LFILKGMGTLITEDGDDVLPTTMQPVTLEDFDEYLSKNELFILKGMGTLITEDGD--- 1328
L LK + + LP E L+ N L + I +
Sbjct: 304 KSLL-LKYLDCRPQD-----LP-----------REVLTTNPR-RLSIIAESIRDGLATWD 345
Query: 1329 -------DVLPTTMQPVTLEDFDEYLSKN---ELLILKGMGTLITEDGDDVLP---TTMQ 1375
D L T ++ +L + + L + I +L +
Sbjct: 346 NWKHVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSVFP-PSAHIPT---ILLSLIWFDVI 400
Query: 1376 PVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV 1435
+ L KY L++ P +P KL N +
Sbjct: 401 KSDVMVVVNKLHKY--------SLVEKQ-------PKESTISIPSIYLELKVKLENEYAL 445
Query: 1436 HISIISGRNVH 1446
H SI+ N+
Sbjct: 446 HRSIVDHYNIP 456
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.8 bits (162), Expect = 4e-11
Identities = 96/602 (15%), Positives = 186/602 (30%), Gaps = 182/602 (30%)
Query: 573 HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGF 632
H +H+ E ++K DI +F D + +
Sbjct: 3 HHHHMDFETG-------EHQYQYK------------DILSVF--EDAFVD-----NFDCK 36
Query: 633 HIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692
++D + + + + ++++ L F L ++
Sbjct: 37 DVQDM--------PKSILSKEEIDHIIMS-KDAVSGTLRL--------FWTLLSKQEEMV 79
Query: 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIV-LGVDRLD 751
QK V V R++Y K L+ I+ P + R+ + Q V RL
Sbjct: 80 ---QKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135
Query: 752 YTKGLVHRLKAFETLLEKHPEHLEKVTL----------LQIAVPSRTDVKEY-------- 793
+L+ + LLE P + V + + + V V+
Sbjct: 136 ----PYLKLR--QALLELRPA--KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187
Query: 794 --------QDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCIS-QDELASF-----YRDAA 839
+ + E + +L+ +I+ +T+ + S Q EL Y +
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 840 VALVTPLRDGMNL-VAKEF-VACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
LV L + N F ++C+I L+ + F + + A +
Sbjct: 248 --LV--LLNVQNAKAWNAFNLSCKI------LLTTRFKQVTDFLSAATTTHISLDHH--S 295
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
+ P +L+ K ++ C+ + P E L NP + AE I
Sbjct: 296 MTLTPDEVKSLLLK-YLDCRPQDLP---------------REVLTTNPRRLSIIAESIR- 338
Query: 958 ALTMPEDERTLRMNYLRK--REKVHDVNYWMRSFLKGMGTLITEDGDDVLPTTLIADEQN 1015
+ + + +K+ + + S L +VL A+ +
Sbjct: 339 -------DGLATWDNWKHVNCDKLTTI---IESSL------------NVLEP---AEYRK 373
Query: 1016 LKFKLGFF---LHIPFPPWDIFRLFPWSD-------EILQGMLGKASLGLLSWLCN---T 1062
+ +L F HIP + W D ++ + K SL + +
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLI----WFDVIKSDVMVVVNKLH-KYSL-VEKQPKESTIS 427
Query: 1063 IKNIADEQNLKFKLGFFLH--------IP--FPPWDIFRLFPWSDEILQGMLGCDMVGFH 1112
I +I E +K + + LH IP F D+ P+ D+ +G H
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP--PYLDQYF-----YSHIGHH 480
Query: 1113 IE 1114
++
Sbjct: 481 LK 482
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 2e-10
Identities = 98/735 (13%), Positives = 201/735 (27%), Gaps = 230/735 (31%)
Query: 89 HNVMEM-VGIEGLTYAGNHGLEIIHPDGSRFVHPIPTEFEDK-VSDLLKTLQEKVMSVHI 146
H+ M+ G Y +I+ F F+ K V D+ K++ K HI
Sbjct: 4 HHHMDFETGEHQYQYK-----DILS----VFEDAFVDNFDCKDVQDMPKSILSKEEIDHI 54
Query: 147 ---DPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILA 203
+ + FW ++ + +E K L
Sbjct: 55 IMSKDAVSGTLR------LFW----------TLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 204 QEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR------ 257
+ E + + + N D Q F +++ R
Sbjct: 99 KTEQRQPSMMTRMYIEQR-----DRLYN--DNQ------------VFAKYNVSRLQPYLK 139
Query: 258 -------LFPWSDEILQGMLGC----------------DMVGFHIEDYCLNFVDCCQRRL 294
L P + ++ G+LG + F I + LN +C
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI--FWLNLKNCNSPET 197
Query: 295 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTK 354
++ L+ R + R + R++ +K Y
Sbjct: 198 --VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP----------YEN 245
Query: 355 GLVHRLKAFETLLE--KHPEHLEKVTLL-QIAVPSRTDVKEYQDLKEEMDQLVGRINGRF 411
L+ +L ++ + L +I + +R K+ D L
Sbjct: 246 CLL--------VLLNVQNAKAWNAFNLSCKILLTTRF--------KQVTDFLSAATTTHI 289
Query: 412 TTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE-PPGVLI 470
+ + D + +L+ K ++ C+ + P VL
Sbjct: 290 S--------------LDHHSMTLTPD----------EVKSLLLK-YLDCRPQDLPREVLT 324
Query: 471 VSPFAGA--GEQMHEALICNPY----EIDAAAEVIHRALTMPEDERTLRMNYLRKR---- 520
+P + E + + L D +I +L L RK
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL------NVLEPAEYRKMFDRL 378
Query: 521 ---EKHMNCPGQ--SSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDY 575
+ P S + + +K K L +++P +S + I
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVI--KSDVMVVVNKLHKYS--LVEKQPKES---TISIPSI 431
Query: 576 HLMLAANTIRNIADEQNLKFKL--GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFH 633
+L L + +E L + + + F D+ P+ D+ +G H
Sbjct: 432 YLELK----VKLENEYALHRSIVDHYNIPKTFDSDDLIP--PYLDQYF-----YSHIGHH 480
Query: 634 I------EDYC--------LNFVDCCQRRL-------GCRVDRKNLLVEHGGRTVRIRPL 672
+ E F+ ++++ N L + ++
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFL---EQKIRHDSTAWNASGSILNTLQQ-----LKF--- 529
Query: 673 PIAIPYERFVQLAQAAP-RVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQ 731
Y+ ++ R+++ LD+ + E++ S Y +++A
Sbjct: 530 -----YKPYICDNDPKYERLVN---------AILDFLPKIEENLICS---KYTDLLRIAL 572
Query: 732 AAPR--VIDTKQKIV 744
A + + K V
Sbjct: 573 MAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 6e-04
Identities = 73/553 (13%), Positives = 159/553 (28%), Gaps = 173/553 (31%)
Query: 8 LSKNELFILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKR 67
L + ++ G+ G T + +
Sbjct: 147 LRPAKNVLIDGVLG-----------SGKT-----------------------WVALDVCL 172
Query: 68 TLQKLANLPD-VH-ISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTE 125
+ + + + +++ + + V+EM ++ L Y + D S I
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEM--LQKLLYQIDPNWT-SRSDHSS---NIKLR 226
Query: 126 FEDKVSDLLKTLQEK-------VMSVHI-DPKIFDSYYNGCCNGTFWPLFHSMPDRAMFC 177
++L + L+ K V+ ++ + K ++++ C + + + +
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVLL-NVQNAKAWNAFNLSC------KILLTTRFKQVTD 279
Query: 178 AEHWRAYAQVNQEFADKTI---KALQILA-------QEEP--ADSGTPLV---------- 215
++ + T+ + +L Q+ P + P
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339
Query: 216 ----WIHDYHLMLAANTIRNI----------ADEQNLKFKLGFF---LHIPFPPWDIFRL 258
W D + + + I A+ + + +L F HIP +
Sbjct: 340 GLATW--DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI-- 395
Query: 259 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLP 318
W D I+ + V+ + K + + ++
Sbjct: 396 --WFDV--------------IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKL 439
Query: 319 IAIPY--ERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376
V P+ D+ I +D+ Y+ + H LK EH E+
Sbjct: 440 ENEYALHRSIVD-HYNIPKTFDSDDLIPPYLDQYFYSH-IGHHLKNI--------EHPER 489
Query: 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 436
+TL + + D L +I R + W+ I + Q + FY+
Sbjct: 490 MTLFR---------MVFLDF----RFLEQKI--RHDSTAWNASGSILNTLQQLK---FYK 531
Query: 437 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 496
+ P + + +F+ ++ E LIC+ Y
Sbjct: 532 P-YICDNDPKYERLVNAILDFL--------------------PKIEENLICSKY-----T 565
Query: 497 EVIHRALTMPEDE 509
+++ AL M EDE
Sbjct: 566 DLLRIAL-MAEDE 577
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 3e-09
Identities = 21/229 (9%), Positives = 56/229 (24%), Gaps = 40/229 (17%)
Query: 301 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR- 359
K G I K+KI+L R +
Sbjct: 206 KQYFNNKGYNFTDEYFFQPKINTTLK-----NYINDKRQKEKIILVYGRPSVKRNAFTLI 260
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
++A + ++K+ E +I VG + +
Sbjct: 261 VEALKIFVQKYDRSNE----WKII-------------------SVGEKHKDIALGKGIHL 297
Query: 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 479
G ++ ++ A + +++ + + + E G+ +++ +
Sbjct: 298 NS-LGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF------GLRVITNKYENKD 350
Query: 480 QM---HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525
+ + AE + + + ++N
Sbjct: 351 LSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKKES-SNMMFYIN 398
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 2e-04
Identities = 17/164 (10%), Positives = 48/164 (29%), Gaps = 34/164 (20%)
Query: 740 KQKIVLGVDRLDYTKGLVHR-LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKE 798
K+KI+L R + ++A + ++K+ E +I
Sbjct: 240 KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNE----WKII--------------- 280
Query: 799 EMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFV 858
VG + + G ++ ++ A + +++ + + + E
Sbjct: 281 ----SVGEKHKDIALGKGIHLNS-LGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMA 335
Query: 859 ACQINEPPGVLIVSPFAGAGEQM---HEALICNPYEIDAAAEVI 899
G+ +++ + + + AE +
Sbjct: 336 HF------GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETL 373
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 2e-07
Identities = 39/248 (15%), Positives = 71/248 (28%), Gaps = 52/248 (20%)
Query: 292 RRLGCRVDR--------KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV------I 337
R++G VD G LP + +RF
Sbjct: 135 RKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGF 194
Query: 338 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLK 397
++ RL KG +KA ++ P+ LL + L+
Sbjct: 195 TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD----AQLLIVGSGR-----YESTLR 245
Query: 398 EEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD-------GM 450
+ + +F G + ++ + A + + G+
Sbjct: 246 RLATDVSQNV--KFL-----------GRLEYQDMINTLAAADIFAMPARTRGGGLDVEGL 292
Query: 451 NLVAKEFVACQINEPPGV-LIVSPFAGAGEQMHEA--LICNPYEIDAAAEVIHRALTMPE 507
+V E AC GV +I GA E + A L+ ++D +E++ L P
Sbjct: 293 GIVYLEAQAC------GVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPI 346
Query: 508 DERTLRMN 515
+
Sbjct: 347 RRAAMGAA 354
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 36/240 (15%), Positives = 79/240 (32%), Gaps = 40/240 (16%)
Query: 296 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV-------IDTKQKIVLGVD 348
+ + R + LP I +R R I +Q ++L V
Sbjct: 144 TDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVG 203
Query: 349 RLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRIN 408
KG+ ++A +L E TLL + + +++ L E++ + +
Sbjct: 204 SDFGRKGVDRSIEALASLPESLRH----NTLLFVVGQDKPR--KFEALAEKLG-VRSNV- 255
Query: 409 GRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 468
F + +++++ A + L ++ +V E + G+
Sbjct: 256 -HFFSG-------------RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA------GL 295
Query: 469 -LIVSPFAGAGEQMHEA----LICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523
++ + G + +A +I P+ + EV+ +ALT N +
Sbjct: 296 PVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQ 355
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 33/257 (12%), Positives = 79/257 (30%), Gaps = 53/257 (20%)
Query: 661 EHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI----DTKQKIV--LGVDRLDYTKGLIES 714
E G +ER + +++ + +
Sbjct: 110 EKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEP-----ERFQI 164
Query: 715 IRNSIAIPYERFVQLAQAAPRV-------IDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 767
+ I +R R I +Q ++L V KG+ ++A +L
Sbjct: 165 LPPGIYP--DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLP 222
Query: 768 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCIS 827
E TLL + + +++ L E++ + + F +
Sbjct: 223 ESLRH----NTLLFVVGQDKPR--KFEALAEKLG-VRSNV--HFFSG------------- 260
Query: 828 QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV-LIVSPFAGAGEQMHEA-- 884
+++++ A + L ++ +V E + G+ ++ + G + +A
Sbjct: 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA------GLPVLTTAVCGYAHYIADANC 314
Query: 885 --LICNPYEIDAAAEVI 899
+I P+ + EV+
Sbjct: 315 GTVIAEPFSQEQLNEVL 331
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-06
Identities = 42/218 (19%), Positives = 68/218 (31%), Gaps = 40/218 (18%)
Query: 655 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI----DTKQKIVLGVDRLDYTKG 710
+ + + R E+ QL A + + Q ++ D
Sbjct: 159 KNSYRDDSDTPESEAR-----RICEQ--QLVDNADVLAVNTQEEMQDLM---HHYDADPD 208
Query: 711 LIESIRNSIAIPYERFVQLAQAAPRV------IDTKQKIVLGVDRLDYTKGLVHRLKAFE 764
I + + E + A I K+V V RL KG +KA
Sbjct: 209 RISVVSPGADV--ELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 765 TLLEKHPEHLEKVTLLQIAVPS--RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYI 822
L ++ P+ + ++ PS Y+ + EE+ + RI RF
Sbjct: 267 ALFDRDPDR--NLRVIICGGPSGPNATPDTYRHMAEELG-VEKRI--RFL---------- 311
Query: 823 YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860
EL + YR A + V + LVA E A
Sbjct: 312 -DPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQAS 348
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-06
Identities = 50/247 (20%), Positives = 81/247 (32%), Gaps = 43/247 (17%)
Query: 290 CQRRLGCRVDR--------KNLLVEHGGRTV-RIRPLPIAIPYERFVQLAQAAPRV---- 336
C+++L D L+ H RI + E + A
Sbjct: 177 CEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRE 236
Query: 337 --IDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS--RTDVKE 392
I K+V V RL KG +KA L ++ P+ + ++ PS
Sbjct: 237 LGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR--NLRVIICGGPSGPNATPDT 294
Query: 393 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 452
Y+ + EE+ + RI RF EL + YR A + V + L
Sbjct: 295 YRHMAEELG-VEKRI--RFL-----------DPRPPSELVAVYRAADIVAVPSFNESFGL 340
Query: 453 VAKEFVACQINEPPGV-LIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPED 508
VA E A G +I + G + E L+ + + A A+ + L E
Sbjct: 341 VAMEAQAS------GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDET 394
Query: 509 ERTLRMN 515
+ +
Sbjct: 395 RIRMGED 401
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-06
Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 337 IDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDL 396
+D ++ I+ V R D KG+ ++ + + EK P V LL + V + D + +
Sbjct: 227 VDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPG----VQLLLVGVMAHDDPEGWIYF 282
Query: 397 KEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKE 456
++ + ++ + + + E+ +F R + V L +R+G L E
Sbjct: 283 EKTLRKIGEDYDVKV--------LTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTE 334
Query: 457 FVACQINEPPGV-LIVSPFAGAGEQMHEA---LICNPYEIDAAAEVIHRALTMPE 507
+ G +I G Q+ + + + A EV+ L PE
Sbjct: 335 AMWK------GKPVIGRAVGGIKFQIVDGETGFLVRD--ANEAVEVVLYLLKHPE 381
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 6e-06
Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 18/155 (11%)
Query: 712 IESIRNSIAIPYERFVQLAQAAPRV------IDTKQKIVLGVDRLDYTKGLVHRLKAFET 765
+ SI E+ V+L Q +D ++ I+ V R D KG+ ++ +
Sbjct: 196 AVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255
Query: 766 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 825
+ EK P V LL + V + D + + ++ + ++ + +
Sbjct: 256 VKEKIPG----VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKV--------LTNLIG 303
Query: 826 ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860
+ E+ +F R + V L +R+G L E +
Sbjct: 304 VHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 8e-06
Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 28/208 (13%)
Query: 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 372
+ + + + ++ RLD K ++A+ E +
Sbjct: 234 VFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDK 293
Query: 373 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI-----NGRFTTPNWSPIRYIYGCIS 427
+TL I P + Q+ KE + +++ I G+ + S
Sbjct: 294 ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF---------PLNS 344
Query: 428 QDELASFYRDAA----VALVTPLRDGMNLVAKEFVACQINEPPGV-LIVSPFAGAGEQM- 481
Q ELA Y A V +T + L E +A G+ +V+ G E +
Sbjct: 345 QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS------GLPAVVTRNGGPAEILD 398
Query: 482 --HEALICNPYEIDAAAEVIHRALTMPE 507
++ +P + + A + +A E
Sbjct: 399 GGKYGVLVDPEDPEDIARGLLKAFESEE 426
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 8e-05
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 24/153 (15%)
Query: 701 GVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRL 760
GV+ + + I+ I ER + ++ RLD K +
Sbjct: 229 GVNTRVFDGEYGDKIKAKITKYLERD-------LGSERMELPAIIASSRLDQKKNHYGLV 281
Query: 761 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI-----NGRFTTPN 815
+A+ E + +TL I P + Q+ KE + +++ I G+ +
Sbjct: 282 EAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF- 340
Query: 816 WSPIRYIYGCISQDELASFYR---DAAVALVTP 845
SQ ELA Y
Sbjct: 341 --------PLNSQQELAGCYAYLASKGSVFALT 365
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-05
Identities = 37/222 (16%), Positives = 71/222 (31%), Gaps = 36/222 (16%)
Query: 301 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR---VIDTKQKIVLGVDRLDYTKGLV 357
N E I+ + I + + + I +KI++ + K +
Sbjct: 168 INETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQ 227
Query: 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417
++AF ++ + LL + D E+ + + + L I R
Sbjct: 228 DVVQAFAKIVTEVD-----AKLLLVG-----DGPEFCTILQLVKNL--HIEDRV------ 269
Query: 418 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV-LIVSPFAG 476
G QD +A + + L+ ++ LV E +AC GV I + G
Sbjct: 270 ---LFLG--KQDNVAELLAMSDLMLLLSEKESFGLVLLEAMAC------GVPCIGTRVGG 318
Query: 477 AGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMN 515
E + +C + A+ + L E R +
Sbjct: 319 IPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGER 360
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 9e-05
Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 53/234 (22%)
Query: 291 QRRLGCRVDR--------KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQK 342
R ++ + +E G +P + F + +
Sbjct: 154 LRPYHEKIIGRIAVSDLARRWQMEALG--SDAVEIPNGVDVASFADAPLLDGYPREGR-- 209
Query: 343 IVLGVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMD 401
VL + R D KG+ L A L+ + P+ V +L + + +L+E+
Sbjct: 210 TVLFLGRYDEPRKGMAVLLAALPKLVARFPD----VEILIVGRG------DEDELREQAG 259
Query: 402 QLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD-GMNLVAKEFVAC 460
L G + RF G + AS R A V L +V E +A
Sbjct: 260 DLAGHL--RFL-----------GQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAA 306
Query: 461 QINEPPGVLIVSPFAGA-------GEQMHEALICNPYEIDAAAEVIHRALTMPE 507
G +V+ A G+ + + D A + L +
Sbjct: 307 ------GTAVVASDLDAFRRVLADGD---AGRLVPVDDADGMAAALIGILEDDQ 351
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 4e-04
Identities = 36/283 (12%), Positives = 75/283 (26%), Gaps = 36/283 (12%)
Query: 309 GRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368
G V I + + + + + L ++R K L + A +
Sbjct: 152 GCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFIS 211
Query: 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQ 428
K+P + + DL + + + + I ++
Sbjct: 212 KYP----DAKVRFLCNSHHES---KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTD 264
Query: 429 DELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV-LIVSPFAGAGEQMHE--AL 485
+ + Y V + +G L + E G LI+S GA +
Sbjct: 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVL------GKPLIISAVGGADDYFSGDCVY 318
Query: 486 ICNPYEIDAAAEVIHRALTMPE---DERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQV 542
P + + D+ + + + G V
Sbjct: 319 KIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNR------KEYGKR--VQDFV 370
Query: 543 NQEF-----ADKTIK----ALQILAQEEPADSGTPLVWIHDYH 576
+ + I L++ ++E P + PL H +H
Sbjct: 371 KTKPTWDDISSDIIDFFNSLLRVESRETPGNEEHPLEHHHHHH 413
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1460 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.88 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.85 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.84 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.84 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.83 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.83 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.83 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.82 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.82 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.81 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.81 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.81 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.81 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.79 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.78 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.78 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.75 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.75 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.74 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.74 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.73 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.73 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.73 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.72 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.71 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.7 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.68 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.66 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.65 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.65 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.64 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.62 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.62 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.59 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.59 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.55 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.55 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.52 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.48 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.46 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.45 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.45 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.39 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.34 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.31 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.31 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.28 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.26 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.2 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.05 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 98.99 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.91 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.91 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 98.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.86 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.85 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.81 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.8 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.8 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.77 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.76 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.76 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.74 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.74 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.71 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.7 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.7 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.69 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.69 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.68 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.65 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.64 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.63 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.62 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.61 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.58 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.51 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.46 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.44 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.36 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.18 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.18 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.11 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.01 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.77 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.74 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.69 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.69 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.56 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.52 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.5 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.41 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.4 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 97.38 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.3 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.29 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.19 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.18 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.17 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.16 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 97.15 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.14 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.06 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.05 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.03 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.96 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.94 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 96.92 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.79 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 96.77 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 96.75 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.74 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 96.73 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 96.73 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 96.72 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 96.69 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 96.65 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 96.64 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 96.61 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 96.57 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 96.57 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 96.56 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 96.54 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 96.54 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 96.52 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 96.5 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.47 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.47 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.47 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.43 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.42 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 96.41 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 96.4 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.36 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 96.28 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.22 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.2 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 96.18 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 96.17 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.17 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 96.15 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 96.14 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.14 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 96.11 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.11 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 96.08 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 96.02 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 95.99 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 95.94 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 95.94 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 95.93 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 95.92 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.9 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.85 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.84 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 95.8 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 95.79 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.76 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.71 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 95.7 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 95.67 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 95.62 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 95.56 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.54 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.52 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.49 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 95.49 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 95.43 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 95.43 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 95.38 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 95.32 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 95.26 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.25 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 95.01 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 94.96 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 94.93 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 94.9 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 94.87 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 94.85 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 94.74 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 94.57 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 94.42 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 94.4 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 94.3 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 94.25 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 94.11 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.05 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 93.98 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 93.67 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 93.27 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 93.13 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 93.04 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 93.02 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 92.87 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 92.86 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 92.86 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 92.84 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 92.74 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 92.59 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 92.45 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 92.42 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 92.35 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 92.32 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 92.18 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 92.14 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 92.08 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 92.08 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 91.88 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 91.8 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 91.65 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 91.53 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 91.15 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 91.13 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 91.07 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 91.02 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 90.96 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 90.94 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 90.94 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 90.9 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 90.61 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 90.59 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 90.52 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 90.38 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 90.37 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 90.27 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 90.24 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 90.21 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 90.11 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 90.07 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 89.93 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 89.7 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 89.7 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 89.63 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 89.34 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 89.17 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 88.98 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 88.81 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 88.32 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 87.96 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 87.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 87.83 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 87.64 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 87.54 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 87.41 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 87.37 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 87.04 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 86.78 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 86.46 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 86.34 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 86.25 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 86.12 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 85.66 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 85.59 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 85.39 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 85.25 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 85.12 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 85.1 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 84.76 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 84.45 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 84.43 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 84.23 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 84.01 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 83.88 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 83.77 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 83.47 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 83.46 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 83.42 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 82.65 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 82.43 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 82.34 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 82.27 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 82.07 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 81.69 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 81.27 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 80.39 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 80.27 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-85 Score=794.91 Aligned_cols=388 Identities=22% Similarity=0.347 Sum_probs=351.2
Q ss_pred hhccCceeeecCcccccccccccccccccccccCCCCc------cccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy775 136 TLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDR------AMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPAD 209 (1460)
Q Consensus 136 L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~------~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~ 209 (1460)
..++++.||++++++++.||+||||++|||+|||+++. ..|+.++|++|++||++||++|++.+++
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-------- 147 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSDAREGWADFGRFTRDFADAILKSSAQ-------- 147 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHTTT--------
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence 45788999999999999999999999999999998543 3445689999999999999999998731
Q ss_pred CCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC--CcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 210 SGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP--WSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 210 ~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP--~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
.+||+|||||||||+||+|||++.| +++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||+
T Consensus 148 ~~~D~VwVhDYhL~llp~~lR~~~~----~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl 223 (496)
T 3t5t_A 148 SADPVYLVHDYQLVGVPALLREQRP----DAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFL 223 (496)
T ss_dssp CSSCEEEEESGGGTTHHHHHHHHCT----TSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHH
T ss_pred CCCCEEEEeCccHhHHHHHHHhhCC----CCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHH
Confidence 2699999999999999999999765 8999999999999999999999 799999999999999999999999999
Q ss_pred HHHHhhc-CceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-hhhhc--cCCeEEEEecCccccCCHHHHHHHH
Q psy775 288 DCCQRRL-GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA-PRVID--TKQKIVLGVDRLDYTKGLVHRLKAF 363 (1460)
Q Consensus 288 ~~~~riL-g~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~-~~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af 363 (1460)
+||++++ |.++......++++|+.++|.++|+|||++.|.+...+. ..+++ +++++|++|||+|+.||+..+|+||
T Consensus 224 ~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af 303 (496)
T 3t5t_A 224 ESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF 303 (496)
T ss_dssp HHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH
T ss_pred HHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceEEEEcccCccccCHHHHHHHH
Confidence 9999999 888765545789999999999999999999998764321 22332 6899999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
+|++++|+++ +++|+|++.|+++++++|+++++++++++++||++||+. ||+++ +.++++++.++|++|||||+
T Consensus 304 -~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv 377 (496)
T 3t5t_A 304 -VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIF 377 (496)
T ss_dssp -HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEE
T ss_pred -HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEE
Confidence 9999999999 999999999999999999999999999999999999886 77765 78999999999999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||++||||||++|||||+. ++||+|+|+++|+++++. +|++|||+|++++|+||.++|+|+++||+.|++++++++.
T Consensus 378 ~SlrEGfgLv~~EamA~~~--~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~ 455 (496)
T 3t5t_A 378 NSTVDGQNLSTFEAPLVNE--RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAAR 455 (496)
T ss_dssp CCSSBSCCSHHHHHHHHCS--SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred CcccccCChhHHHHHHhCC--CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999963 269999999999999995 6999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhcc
Q psy775 523 HMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQE 560 (1460)
Q Consensus 523 ~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~ 560 (1460)
+++ +++ |++.+++.++...+.
T Consensus 456 ~~d----------------~~~-W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 456 PWT----------------LEA-WVQAQLDGLAADHAA 476 (496)
T ss_dssp TCB----------------HHH-HHHHHHHHHHHHHHH
T ss_pred HCC----------------HHH-HHHHHHHHHhhcccc
Confidence 999 766 999999998765433
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-73 Score=697.13 Aligned_cols=389 Identities=37% Similarity=0.628 Sum_probs=360.7
Q ss_pred hccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEE
Q psy775 137 LQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVW 216 (1460)
Q Consensus 137 ~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVw 216 (1460)
.+++|.||++++++++.||+||||++|||+|||.++...|+.++|++|.+||+.||++|.+.++ ++|+||
T Consensus 59 ~~~~~~~v~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~w~~y~~vN~~fa~~l~~~~~----------~~DiV~ 128 (482)
T 1uqt_A 59 GNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQ----------DDDIIW 128 (482)
T ss_dssp TTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGCC----------TTCEEE
T ss_pred CCceEEEEECCHHHHHHHHHHhhhhhccccccCcCCccccCHHHHHHHHHHHHHHHHHHHHhcC----------CCCEEE
Confidence 5689999999999999999999999999999999999999999999999999999999987653 589999
Q ss_pred EeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc
Q psy775 217 IHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC 296 (1460)
Q Consensus 217 IHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~ 296 (1460)
|||||++++|.++|++.+ +++|+||+|+|||++++|+++|++++|+++|++||+||||+++|+++|+++|+++++.
T Consensus 129 vHdyhl~~l~~~lr~~~~----~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~ 204 (482)
T 1uqt_A 129 IHDYHLLPFAHELRKRGV----NNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRV 204 (482)
T ss_dssp EESGGGTTHHHHHHHTTC----CSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCE
T ss_pred EECchHHHHHHHHHHhCC----CCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCC
Confidence 999999999999998644 7999999999999999999999999999999999999999999999999999999988
Q ss_pred eecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc-----chhhhc--cCCeEEEEecCccccCCHHHHHHHHHHHHHh
Q psy775 297 RVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA-----APRVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK 369 (1460)
Q Consensus 297 ~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~-----~~~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~ 369 (1460)
+..... .+.++|+.++|.++|+|||++.|.+.... ...+++ +++++|++|||+++.||+..+|+||++++++
T Consensus 205 ~~~~~~-~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~ 283 (482)
T 1uqt_A 205 TTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEK 283 (482)
T ss_dssp EEETTT-EEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHH
T ss_pred ccccCC-eEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHh
Confidence 766544 47889999999999999999999765322 112222 5789999999999999999999999999999
Q ss_pred CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCC
Q psy775 370 HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDG 449 (1460)
Q Consensus 370 ~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEG 449 (1460)
+|+++++++|+|+|.|+++++++|+++++++++++++||.+||+.+|.||+++.|.++++++.++|++|||||+||++||
T Consensus 284 ~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EG 363 (482)
T 1uqt_A 284 YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 363 (482)
T ss_dssp CGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBS
T ss_pred CccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCC
Q psy775 450 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQ 529 (1460)
Q Consensus 450 fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~ 529 (1460)
||||++|||||+.+.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.+++
T Consensus 364 fgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s---- 439 (482)
T 1uqt_A 364 MNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKND---- 439 (482)
T ss_dssp CCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTC----
T ss_pred CCchHHHHHHhCCCCCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC----
Confidence 9999999999998766799999999999999988999999999999999999999999999999999999998888
Q ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHh
Q psy775 530 SSLGGNTSAYAQVNQEFADKTIKALQIL 557 (1460)
Q Consensus 530 ~sl~~~~~~Y~~VNq~fAd~~le~l~~~ 557 (1460)
+.+ |++.+++.|+..
T Consensus 440 ------------~~~-~a~~~l~~l~~~ 454 (482)
T 1uqt_A 440 ------------INH-WQECFISDLKQI 454 (482)
T ss_dssp ------------HHH-HHHHHHHHHHHS
T ss_pred ------------HHH-HHHHHHHHHHhc
Confidence 655 999999998765
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-71 Score=671.55 Aligned_cols=349 Identities=23% Similarity=0.374 Sum_probs=311.7
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|+++|++||+++.+.++. . ++|+||||||||+++|.+|| +.+++.+|+||||+|||++++|++
T Consensus 125 ~~w~~Y~~vN~~fA~~i~~~~~~--~------~~D~VwVhDYhL~llp~~lR----~~~~~~~igfFlHiPfPs~e~f~~ 192 (496)
T 3t5t_A 125 EGWADFGRFTRDFADAILKSSAQ--S------ADPVYLVHDYQLVGVPALLR----EQRPDAPILLFVHIPWPSADYWRI 192 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT--C------SSCEEEEESGGGTTHHHHHH----HHCTTSCEEEECCSCCCCHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--C------CCCEEEEeCccHhHHHHHHH----hhCCCCeEEEEEcCCCCCHHHHhh
Confidence 36999999999999999886521 1 23799999999999999999 667899999999999999999999
Q ss_pred Cc--cHHHHHhhcccCceeecccHhHHHHHHHHHHHHh-CceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcc
Q psy775 614 FP--WSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL-GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR 690 (1460)
Q Consensus 614 lP--~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlL-g~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~ 690 (1460)
+| +|++||++||+||+|||||++|++||++||+|++ |+++......++++|+.++|.++|+|||++.|.+....
T Consensus 193 Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~--- 269 (496)
T 3t5t_A 193 LPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ--- 269 (496)
T ss_dssp SCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC---
T ss_pred CcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH---
Confidence 99 7999999999999999999999999999999999 98886555579999999999999999999999765331
Q ss_pred ccccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhC
Q psy775 691 VIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 770 (1460)
Q Consensus 691 ~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~ 770 (1460)
+. +++|++ + +++++|++|||+|+.||+..+|+|| +||++|
T Consensus 270 ~~--------------------~~lr~~-------~------------~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~ 309 (496)
T 3t5t_A 270 LP--------------------EGIEEW-------A------------DGHRLVVHSGRTDPIKNAERAVRAF-VLAARG 309 (496)
T ss_dssp CC--------------------TTHHHH-------H------------TTSEEEEEEEESSGGGCHHHHHHHH-HHHHHT
T ss_pred HH--------------------HHHHHH-------h------------CCceEEEEcccCccccCHHHHHHHH-HHHHhC
Confidence 11 123332 2 4789999999999999999999999 999999
Q ss_pred CCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCC
Q psy775 771 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM 850 (1460)
Q Consensus 771 P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGm 850 (1460)
|+++ +++|+|+|.|+++++++|+++++++++++++||++||+. ||+|. +.++++|+.+||++|||||+||++|||
T Consensus 310 P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrEGf 384 (496)
T 3t5t_A 310 GGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVDGQ 384 (496)
T ss_dssp SSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSBSC
T ss_pred cccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcccccC
Confidence 9999 999999999999999999999999999999999999976 77765 688999999999999999999999999
Q ss_pred CccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccc
Q psy775 851 NLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPF 930 (1460)
Q Consensus 851 nLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef 930 (1460)
|||++|||||+. .+||+|+|+++|+++.|+
T Consensus 385 gLv~~EamA~~~--~~g~lVlSe~aGa~~~l~------------------------------------------------ 414 (496)
T 3t5t_A 385 NLSTFEAPLVNE--RDADVILSETCGAAEVLG------------------------------------------------ 414 (496)
T ss_dssp CSHHHHHHHHCS--SCCEEEEETTBTTHHHHG------------------------------------------------
T ss_pred ChhHHHHHHhCC--CCCCEEEeCCCCCHHHhC------------------------------------------------
Confidence 999999999962 369999999999988331
Q ss_pred cCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhc
Q psy775 931 AGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 931 ~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
++|++|||||++++|++|.+||+|+++||+.|+++++++|.+||+.+|+++|+++|.....+
T Consensus 415 -------~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 -------EYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp -------GGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 35799999999999999999999999999999999999999999999999999999877543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-59 Score=569.79 Aligned_cols=355 Identities=37% Similarity=0.650 Sum_probs=319.8
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|.+|.++|+.||+++.+.++ ..|+|||||||++++|.++| +..++.+++||+|+|||+++.++
T Consensus 100 ~~~w~~y~~vN~~fa~~l~~~~~----------~~DiV~vHdyhl~~l~~~lr----~~~~~~~i~~~~H~pfp~~~~~~ 165 (482)
T 1uqt_A 100 RPAWDGYLRVNALLADKLLPLLQ----------DDDIIWIHDYHLLPFAHELR----KRGVNNRIGFFLHIPFPTPEIFN 165 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCC----------TTCEEEEESGGGTTHHHHHH----HTTCCSCEEEECCSCCCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEECchHHHHHHHHH----HhCCCCcEEEEEcCCCCCHHHHh
Confidence 46799999999999999876431 23799999999999999998 55678999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
.+|++++|+++|++||+||||+++|+++|+++|+++++.+..... .+.+.|+.++|.++|+|||++.|.+.... +.+.
T Consensus 166 ~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~-~~~~~g~~~~v~vip~GID~~~f~~~~~~-~~~~ 243 (482)
T 1uqt_A 166 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAG-PLPP 243 (482)
T ss_dssp TSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT-EEEETTEEEEEEECCCCCCHHHHHHHHHS-CCCH
T ss_pred hCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCC-eEEECCeEEEEEEEeccCCHHHHHHHhcC-cchH
Confidence 999999999999999999999999999999999999988766543 47889999999999999999999875442 1111
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
+ .+++|+++ .++++|++|||+++.||+..+|+||+++++++|+
T Consensus 244 -----------------~-~~~lr~~~-------------------~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~ 286 (482)
T 1uqt_A 244 -----------------K-LAQLKAEL-------------------KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQ 286 (482)
T ss_dssp -----------------H-HHHHHHHT-------------------TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGG
T ss_pred -----------------H-HHHHHHHh-------------------CCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCcc
Confidence 0 13444432 4789999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
++++++|+|+|.|+++++++|+++++++++++++||++||+.+|.||+++.|.++++++.++|++|||||+||++|||||
T Consensus 287 ~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgL 366 (482)
T 1uqt_A 287 HHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNL 366 (482)
T ss_dssp GTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCH
T ss_pred ccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
|++|||||+.++++||+|+|+++|+++
T Consensus 367 v~lEAmA~g~~~~~gpvV~S~~~G~~~----------------------------------------------------- 393 (482)
T 1uqt_A 367 VAKEYVAAQDPANPGVLVLSQFAGAAN----------------------------------------------------- 393 (482)
T ss_dssp HHHHHHHHSCTTSCCEEEEETTBGGGG-----------------------------------------------------
T ss_pred hHHHHHHhCCCCCCCCEEEECCCCCHH-----------------------------------------------------
Confidence 999999998766678999999999887
Q ss_pred CcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 933 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 933 ~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.+.+|++|||+|++++|++|.++|+|++++|+.+++++++++.++++.+|+++|++.+.+.
T Consensus 394 ---~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 394 ---ELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp ---TCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred ---HhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 2235799999999999999999999999999999999999999999999999999999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=229.37 Aligned_cols=283 Identities=18% Similarity=0.188 Sum_probs=201.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc---cc-----c---cCCCcHHHHhhhccCceeeecc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD---IF-----R---LFPWSDEILQGMLGCDMVGFHI 279 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e---if-----r---~LP~r~eil~gLL~aDlIgF~t 279 (1460)
..|+|.+|+++..+++.++++.. +.++.+.+|-.++..- .+ + ........-..+-.||.|-+.+
T Consensus 122 ~~Dii~~~~~~~~~~~~~~~~~~-----~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S 196 (439)
T 3fro_A 122 LPDVVHFHDWHTVFAGALIKKYF-----KIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVS 196 (439)
T ss_dssp CCSEEEEESGGGHHHHHHHHHHH-----CCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESC
T ss_pred CCeEEEecchhhhhhHHHHhhcc-----CCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecC
Confidence 57999999999999998887542 5889999998875411 01 1 1111133334444689999988
Q ss_pred HHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhc------cchhhhc----cCCeEEEEecC
Q psy775 280 EDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQ------AAPRVID----TKQKIVLGVDR 349 (1460)
Q Consensus 280 ~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~------~~~~~~~----~~~kvIL~VgR 349 (1460)
..+++.... .++ ....++.++|+|+|.+.|.+... ....+++ .+.++|+++||
T Consensus 197 ~~~~~~~~~----~~~-------------~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~ 259 (439)
T 3fro_A 197 RGYLIDEWG----FFR-------------NFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGR 259 (439)
T ss_dssp HHHHHHTHH----HHG-------------GGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSCEEEEEECC
T ss_pred HHHHHHHhh----hhh-------------hcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCCcEEEEEcc
Confidence 877766222 111 11235678999999998866421 1111211 33489999999
Q ss_pred cc-ccCCHHHHHHHHHHHHHhC--CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC
Q psy775 350 LD-YTKGLVHRLKAFETLLEKH--PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCI 426 (1460)
Q Consensus 350 Ld-~~KGI~~lL~Af~~lL~~~--P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v 426 (1460)
+. +.||+..+++|++++.+++ |+ +.|+.+|.+. + .+.+++++++.+.+ .++++.|.+
T Consensus 260 ~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g~----~---~~~~~l~~~~~~~~---------~~~~~~g~~ 319 (439)
T 3fro_A 260 FDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----P---ELEGWARSLEEKHG---------NVKVITEML 319 (439)
T ss_dssp SSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCCC----H---HHHHHHHHHHHHCT---------TEEEECSCC
T ss_pred cccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCCC----h---hHHHHHHHHHhhcC---------CEEEEcCCC
Confidence 99 9999999999999998866 65 4566666322 1 23345555554443 357778999
Q ss_pred CHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc--ccEEECCCCHHHHHHHHHHHcC
Q psy775 427 SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 427 ~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--~allVNP~D~~elA~AI~~aL~ 504 (1460)
+.+++..+|+.||++|+||.+||||++++||||| |.|+|+|..+|..+.+. .|++++|.|++++|++|.++++
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-----G~Pvi~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~ 394 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALE 394 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT-----TCEEEEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC-----CCCeEEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999 78889999988888773 3999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHh
Q psy775 505 MPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQIL 557 (1460)
Q Consensus 505 m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~ 557 (1460)
++++.++...+..++.+++++ ... +++.+.+.|+.+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~s----------------~~~-~~~~~~~~~~~~ 430 (439)
T 3fro_A 395 LSRSDLSKFRENCKKRAMSFS----------------WEK-SAERYVKAYTGS 430 (439)
T ss_dssp HTTTTTHHHHHHHHHHHHTSC----------------HHH-HHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHHhhCc----------------HHH-HHHHHHHHHHHH
Confidence 433343333444455556666 333 666777777654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-21 Score=236.58 Aligned_cols=259 Identities=14% Similarity=0.134 Sum_probs=179.7
Q ss_pred CCCCEEEEeCcchhHHHHHHHhhhhccC--CCceEEEEEecC-----CCCcccc-ccCCC--------------------
Q psy775 210 SGTPLVWIHDYHLMLAANTIRNIADEQN--LKFKLGFFLHIP-----FPPWDIF-RLFPW-------------------- 261 (1460)
Q Consensus 210 ~~gDvVwIHDYhL~llP~~LR~~~p~~~--~~~~IgfFlHiP-----FPs~eif-r~LP~-------------------- 261 (1460)
.++|++-+||+|-.++|.+++......+ .+.++.|..|-. ||....- ..+|.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 3567888999999999999987643211 268999999953 2211110 00111
Q ss_pred cHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc---------
Q psy775 262 SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA--------- 332 (1460)
Q Consensus 262 r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~--------- 332 (1460)
-..+-.++..||.|---++.|++..++.-. .|... ....+..++.++|+|||.+.|.+....
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~l-------~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISGIA--RGCEL-------DNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSSS-------CCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcccc--ccccc-------ccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 124566778899998888888876654210 01111 112345578899999999888653210
Q ss_pred --------ch-hhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHH
Q psy775 333 --------AP-RVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDL 396 (1460)
Q Consensus 333 --------~~-~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L 396 (1460)
.+ .+.+ .+.++|++|||+++.||+..+++|+++++++.++ ++.+|. ++...
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~------l~l~G~---G~~~~---- 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQ------IVLLGT---GKKKF---- 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCE------EEEECC---BCHHH----
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCe------EEEEec---cCchH----
Confidence 00 0111 4678999999999999999999999999765432 333342 22222
Q ss_pred HHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC
Q psy775 397 KEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476 (1460)
Q Consensus 397 ~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG 476 (1460)
...+.......+.+ +.+.+..+.+++..+|+.||+||+||.+||||++++||||| |.|+|+|+.+|
T Consensus 370 ~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~-----G~PvI~s~~gG 435 (536)
T 3vue_A 370 EKLLKSMEEKYPGK---------VRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY-----GTPCACASTGG 435 (536)
T ss_dssp HHHHHHHHHHSTTT---------EEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT-----TCCEEECSCTH
T ss_pred HHHHHHHHhhcCCc---------eEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc-----CCCEEEcCCCC
Confidence 22233333333332 34457889999999999999999999999999999999999 77889999999
Q ss_pred chhcccc---cE----------EECCCCHHHHHHHHHHHcC
Q psy775 477 AGEQMHE---AL----------ICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 477 aa~~L~~---al----------lVNP~D~~elA~AI~~aL~ 504 (1460)
..+.+.+ |+ +|+|.|++++|+||.++|.
T Consensus 436 ~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 436 LVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp HHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred chheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 9988843 44 8899999999999999886
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=214.36 Aligned_cols=269 Identities=12% Similarity=0.110 Sum_probs=180.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCc--eeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCD--MVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aD--lIgF~t~~yar~FL~ 288 (1460)
..|+|++|.+. ..+...+..... .....++...+|...+... ..+-..+-.+| .|-+.+....+.+.+
T Consensus 81 ~~Div~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~~~ 150 (413)
T 3oy2_A 81 KPDIVMIYNDP-IVIGNYLLAMGK-CSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDICN 150 (413)
T ss_dssp CCSEEEEEECH-HHHHHHHHHGGG-CCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHHHH
T ss_pred CCCEEEEcchH-HHHHHHHHHhcc-CCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHHHH
Confidence 47999999443 333434433211 1113455666665443321 11223334467 888888766665554
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-c--CCeEEEEecCccccCCHHHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-T--KQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-~--~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
+|. ..++.++|+|||.+.|....+ .... . ++++|+++||+.+.||+..+++||.+
T Consensus 151 -----~~~--------------~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~ 208 (413)
T 3oy2_A 151 -----YGC--------------KVPINIVSHFVDTKTIYDARK---LVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAAR 208 (413)
T ss_dssp -----TTC--------------CSCEEECCCCCCCCCCTTHHH---HTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHH
T ss_pred -----cCC--------------CCceEEeCCCCCHHHHHHHHH---hcCCCcccCceEEEEcCCCchhcCcHHHHHHHHH
Confidence 121 236789999999987722111 1111 2 68899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|+++ |+.+|.+..... .++++.+.+++.+.+..-.-.-+..++++.|.++++++..+|+.||++|+||
T Consensus 209 l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS 281 (413)
T 3oy2_A 209 FISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCS 281 (413)
T ss_dssp HHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECC
T ss_pred HHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCC
Confidence 999999874 555664432221 1244555555555443200000012678889999999999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc------------------cE--EECCCCHHHHHHHHHHHcCC
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE------------------AL--ICNPYEIDAAAEVIHRALTM 505 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~------------------al--lVNP~D~~elA~AI~~aL~m 505 (1460)
..||||++++||||| |.|+|+|..+|..+.+.+ |+ +++|.|++++|++| +++++
T Consensus 282 ~~E~~~~~~lEAma~-----G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 282 SGEGFGLCSAEGAVL-----GKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKD 355 (413)
T ss_dssp SCCSSCHHHHHHHTT-----TCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTS
T ss_pred CcCCCCcHHHHHHHc-----CCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcC
Confidence 999999999999999 678899999888887754 77 99999999999999 99996
Q ss_pred CHHHHHHHHHHHHHHH-hhcC
Q psy775 506 PEDERTLRMNYLRKRE-KHMN 525 (1460)
Q Consensus 506 ~~~er~~R~~~l~~~v-~~~~ 525 (1460)
+...+++..+ .++.+ .+++
T Consensus 356 ~~~~~~~~~~-a~~~~~~~fs 375 (413)
T 3oy2_A 356 EKNRKEYGKR-VQDFVKTKPT 375 (413)
T ss_dssp HHHHHHHHHH-HHHHHTTSCC
T ss_pred HHHHHHHHHH-HHHHHHHhCC
Confidence 5554444444 44444 4555
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-20 Score=213.56 Aligned_cols=278 Identities=16% Similarity=0.174 Sum_probs=191.4
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHH-HHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDE-ILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~e-il~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+||+|+...+.+...+.++.. ..++.+.+|-..+. +...+.... +-..+-.+|.|-+.+....+.+.+.
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 158 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQAG----ASKVIASTHGHEVG---WSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSA 158 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHHTT----CSEEEEECCSTHHH---HTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHH
T ss_pred CCCEEEECCcchHHHHHHHHHhcC----CCcEEEEeccchhh---hhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHh
Confidence 479999998765544333333221 23588888854221 112222222 2233345899998888776666552
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhh-ccchhhhc-----cCCeEEEEecCccccCCHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLA-QAAPRVID-----TKQKIVLGVDRLDYTKGLVHRLKAF 363 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~-~~~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af 363 (1460)
. +...++.++|+|+|.+.|.+.. ......++ .++++|+++||+.+.||+..+++|+
T Consensus 159 ~------------------~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~ 220 (394)
T 3okp_A 159 F------------------GSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAM 220 (394)
T ss_dssp H------------------CSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHH
T ss_pred c------------------CCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHH
Confidence 1 1123678999999998886521 11112221 4558999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
+++.+++|+++ |+.+|. ++..+.+ ++++..++.. +.+.|.++++++..+|+.||++|+
T Consensus 221 ~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~~~~---------v~~~g~~~~~~~~~~~~~ad~~v~ 278 (394)
T 3okp_A 221 PQVIAARPDAQ----LLIVGS-----GRYESTL----RRLATDVSQN---------VKFLGRLEYQDMINTLAAADIFAM 278 (394)
T ss_dssp HHHHHHSTTCE----EEEECC-----CTTHHHH----HHHTGGGGGG---------EEEEESCCHHHHHHHHHHCSEEEE
T ss_pred HHHHhhCCCeE----EEEEcC-----chHHHHH----HHHHhcccCe---------EEEcCCCCHHHHHHHHHhCCEEEe
Confidence 99999998763 555553 2222333 3333222222 455699999999999999999999
Q ss_pred ccCC-------CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHH
Q psy775 444 TPLR-------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRM 514 (1460)
Q Consensus 444 pSlr-------EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~ 514 (1460)
||.. ||||++++||||| |.|+|+|..+|..+.+.+ |++++|.|+++++++|.+++++++..++.+.
T Consensus 279 ps~~~~~~~~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~ 353 (394)
T 3okp_A 279 PARTRGGGLDVEGLGIVYLEAQAC-----GVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGA 353 (394)
T ss_dssp CCCCBGGGTBCCSSCHHHHHHHHT-----TCCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cCccccccccccccCcHHHHHHHc-----CCCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999 9999999999999 678899999888888754 8999999999999999999996655555554
Q ss_pred HHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHh
Q psy775 515 NYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQIL 557 (1460)
Q Consensus 515 ~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~ 557 (1460)
++......+++ .. .+++.+.+.|++.
T Consensus 354 ~~~~~~~~~~s----------------~~-~~~~~~~~~~~~~ 379 (394)
T 3okp_A 354 AGRAHVEAEWS----------------WE-IMGERLTNILQSE 379 (394)
T ss_dssp HHHHHHHHHTB----------------HH-HHHHHHHHHHHSC
T ss_pred HHHHHHHHhCC----------------HH-HHHHHHHHHHHHh
Confidence 44433334455 33 3667777777654
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=218.73 Aligned_cols=272 Identities=17% Similarity=0.151 Sum_probs=185.7
Q ss_pred CCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccC-----C-CcHHH-HhhhccCceeeeccHHhHH
Q psy775 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF-----P-WSDEI-LQGMLGCDMVGFHIEDYCL 284 (1460)
Q Consensus 212 gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~L-----P-~r~ei-l~gLL~aDlIgF~t~~yar 284 (1460)
.|+|++|++...+++.++.+.. +.++.+.+|-.++........ + .+..+ ...+-.+|.|-+.+....+
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~~-----~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 197 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDLW-----RIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQ 197 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHH-----TCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred CCEEEeCCccHHHHHHHHHHHc-----CCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHH
Confidence 6999999877666665565432 478899999865422111000 0 01111 1223358888888877766
Q ss_pred HHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-hhhhc-----cCCeEEEEecCccccCCHHH
Q psy775 285 NFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA-PRVID-----TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 285 ~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~-~~~~~-----~~~kvIL~VgRLd~~KGI~~ 358 (1460)
.+.+. +|. ...++.++|+|+|.+.|.+..... ...++ .++++|+++||+.+.||+..
T Consensus 198 ~~~~~----~g~-------------~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 198 DLMHH----YDA-------------DPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp HHHHH----HCC-------------CGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred HHHHH----hCC-------------ChhheEEecCCccccccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 65542 121 123567899999998876532211 11111 46789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+++|+.++.+++|+. ++.|+++|.+.. +++. .+++++++.+.+.. +.+.+.|.++++++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~l~-------~~v~~~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELGVE-------KRIRFLDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT-------TTEEEECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcCCC-------CcEEEcCCCChHHHHHHHHhC
Confidence 999999999998853 366777775321 1222 23444444443321 224556999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHH
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMN 515 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~ 515 (1460)
|++|+||..||||++++||||| |.|+|+|..+|..+.+.+ |++++|.|+++++++|.+++++++..+++. +
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~-----G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~-~ 400 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMG-E 400 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHT-----TCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHH-H
T ss_pred CEEEECccccCCchHHHHHHHc-----CCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHH-H
Confidence 9999999999999999999999 678899999888888843 899999999999999999999655444444 3
Q ss_pred HHHHHHhhcC
Q psy775 516 YLRKREKHMN 525 (1460)
Q Consensus 516 ~l~~~v~~~~ 525 (1460)
..++.+.+++
T Consensus 401 ~~~~~~~~~s 410 (438)
T 3c48_A 401 DAVEHARTFS 410 (438)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhCC
Confidence 4455555555
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=225.01 Aligned_cols=282 Identities=15% Similarity=0.073 Sum_probs=185.9
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccc-cccC----C---------CcHHH-HhhhccCcee
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDI-FRLF----P---------WSDEI-LQGMLGCDMV 275 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~ei-fr~L----P---------~r~ei-l~gLL~aDlI 275 (1460)
..|+|++|.++..+++.++.+.. +.++.+.+|-.++...- +... | .+..+ -..+-.||.|
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~~-----~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 194 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNIK-----GLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKI 194 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-----CCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEE
T ss_pred CCCEEEEcCCcchHHHHHHHHhc-----CCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEE
Confidence 36999999987766666665543 47788999976432110 0000 0 00001 1223346777
Q ss_pred eeccHHhHHHHHHHHHhhcC-ceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc-----c-hhh------hccCCe
Q psy775 276 GFHIEDYCLNFVDCCQRRLG-CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA-----A-PRV------IDTKQK 342 (1460)
Q Consensus 276 gF~t~~yar~FL~~~~riLg-~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~-----~-~~~------~~~~~k 342 (1460)
-+.+....+.+.+. ..+| .. . .....++.++|+|||.+.|.+.... . .+. ...+++
T Consensus 195 i~~S~~~~~~~~~~--~~~g~~~-~--------~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 195 IVSTSQERFGQYSH--DLYRGAV-N--------VEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp EESSHHHHHHTTTS--GGGTTTC-C--------TTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSC
T ss_pred EECCHHHHHHHHhh--hcccccc-c--------ccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCc
Confidence 66666544433220 0011 00 0 0023467899999999888653210 0 011 124678
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCC------h-HHHHHHHHHHHHHHHHHhcccCCCC
Q psy775 343 IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD------V-KEYQDLKEEMDQLVGRINGRFTTPN 415 (1460)
Q Consensus 343 vIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~------~-~ey~~L~~ev~~lv~~IN~~fg~~~ 415 (1460)
+|+++||+.+.||+..+++|+.++.+++|+. +.|+++|... +. . ....++.+++++++.+.+..
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----- 334 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----- 334 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-----
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-----
Confidence 9999999999999999999999998876652 3455555421 11 0 12234456666666665432
Q ss_pred cccEEEEcCCCCHHHHHHHHHhc----cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEEC
Q psy775 416 WSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICN 488 (1460)
Q Consensus 416 ~~pIv~~~g~v~~eeL~aLY~aA----DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVN 488 (1460)
+.+.+.|.++++++..+|+.| |++|+||.+||||++++||||| |.|+|+|..+|..+.+.+ |++++
T Consensus 335 --~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~-----G~PvI~s~~~g~~e~v~~~~~g~l~~ 407 (499)
T 2r60_A 335 --GKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVD 407 (499)
T ss_dssp --TTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT-----TCCEEEESSBHHHHHTGGGTSSEEEC
T ss_pred --ceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc-----CCCEEEecCCCHHHHhcCCceEEEeC
Confidence 224556999999999999999 9999999999999999999999 678899998888887743 89999
Q ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh-cC
Q psy775 489 PYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH-MN 525 (1460)
Q Consensus 489 P~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~-~~ 525 (1460)
|.|++++|++|.++++++...+++..++ ++.+.+ ++
T Consensus 408 ~~d~~~la~~i~~ll~~~~~~~~~~~~a-~~~~~~~fs 444 (499)
T 2r60_A 408 PEDPEDIARGLLKAFESEETWSAYQEKG-KQRVEERYT 444 (499)
T ss_dssp TTCHHHHHHHHHHHHSCHHHHHHHHHHH-HHHHHHHSB
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHhCC
Confidence 9999999999999999655544444444 444444 66
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-19 Score=210.05 Aligned_cols=298 Identities=17% Similarity=0.179 Sum_probs=212.5
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCc---ccc-----c---cCccHHHHHhhcccCceeecccH
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPW---DIF-----R---LFPWSDEILQGMLGCDMVGFHIE 635 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~---e~f-----r---~lP~r~eIL~~LL~aDlIGFqt~ 635 (1460)
.|+|.+|+++..+++..+.+ ....+..+.+|-.++.. ..+ + ........-..+-.||.|-+.+.
T Consensus 123 ~Dii~~~~~~~~~~~~~~~~-----~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~ 197 (439)
T 3fro_A 123 PDVVHFHDWHTVFAGALIKK-----YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSR 197 (439)
T ss_dssp CSEEEEESGGGHHHHHHHHH-----HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCH
T ss_pred CeEEEecchhhhhhHHHHhh-----ccCCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCH
Confidence 37999999998877777762 23567888999875331 000 0 11111222334456899988888
Q ss_pred hHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHH
Q psy775 636 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESI 715 (1460)
Q Consensus 636 ~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 715 (1460)
.+++.... .++. ...++.++|+|||.+.|.+...... . ....+.+
T Consensus 198 ~~~~~~~~----~~~~-------------~~~~i~vi~ngvd~~~~~~~~~~~~-~-----------------~~~~~~~ 242 (439)
T 3fro_A 198 GYLIDEWG----FFRN-------------FEGKITYVFNGIDCSFWNESYLTGS-R-----------------DERKKSL 242 (439)
T ss_dssp HHHHHTHH----HHGG-------------GTTSEEECCCCCCTTTSCGGGSCSC-H-----------------HHHHHHH
T ss_pred HHHHHHhh----hhhh-------------cCCceeecCCCCCchhcCcccccch-h-----------------hhhHHHH
Confidence 87776222 1111 1224778999999988865421100 0 0112456
Q ss_pred HhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCcc-ccCCHHHHHHHHHHHHHhC--CCCCCCEEEEEEEcCCCCChhH
Q psy775 716 RNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLD-YTKGLVHRLKAFETLLEKH--PEHLEKVTLLQIAVPSRTDVKE 792 (1460)
Q Consensus 716 r~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd-~~KGi~~kL~Afe~fL~~~--P~~~~kVvLvqi~~psr~~~~~ 792 (1460)
|++++++ .+ ++|+++||+. +.||+...++|++++.+++ |+ +.|+.+|.+.
T Consensus 243 ~~~~~~~----------------~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g~------ 295 (439)
T 3fro_A 243 LSKFGMD----------------EG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD------ 295 (439)
T ss_dssp HHHHTCC----------------SC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCCC------
T ss_pred HHHcCCC----------------CC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCCC------
Confidence 6665543 44 8999999999 9999999999999998876 65 5677666432
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEc
Q psy775 793 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS 872 (1460)
Q Consensus 793 y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlS 872 (1460)
..+.+++++++.+.+ .++++.|.++.+++..+|+.||++|+||..|||+++++||||| +.|+|+|
T Consensus 296 -~~~~~~l~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-----G~Pvi~s 360 (439)
T 3fro_A 296 -PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAIPIAS 360 (439)
T ss_dssp -HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT-----TCEEEEE
T ss_pred -hhHHHHHHHHHhhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC-----CCCeEEc
Confidence 134466777766654 2577899999999999999999999999999999999999999 7899999
Q ss_pred CCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHH
Q psy775 873 PFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 952 (1460)
Q Consensus 873 e~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA 952 (1460)
..+|..+.+. + ..+++++|.|++++|
T Consensus 361 ~~~~~~e~~~---------------------------------------------~---------~~g~~~~~~d~~~la 386 (439)
T 3fro_A 361 AVGGLRDIIT---------------------------------------------N---------ETGILVKAGDPGELA 386 (439)
T ss_dssp SSTHHHHHCC---------------------------------------------T---------TTCEEECTTCHHHHH
T ss_pred CCCCcceeEE---------------------------------------------c---------CceEEeCCCCHHHHH
Confidence 9887666110 0 245899999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhcc
Q psy775 953 EVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITED 1000 (1460)
Q Consensus 953 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 1000 (1460)
++|.+++++.++.++...+..++++.++++..+++++++-+++...+.
T Consensus 387 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 387 NAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp HHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhh
Confidence 999999995444444444455777788999999999999998887543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-19 Score=208.73 Aligned_cols=257 Identities=15% Similarity=0.098 Sum_probs=185.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|.+....++.++.+.. +.++.+.+|-.+|....++.+-..-+ ..+-.+|.+-+.+....+.+.+.
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~~-----~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~- 178 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQAA-----EGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQMEA- 178 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHHE-----ESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHHH-
T ss_pred CCCEEEECCccchHHHHHHHHhc-----CCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHHh-
Confidence 37999999998877655554432 47899999998887543322111111 33456899999887666655541
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCc-cccCCHHHHHHHHHHHHHh
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRL-DYTKGLVHRLKAFETLLEK 369 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRL-d~~KGI~~lL~Af~~lL~~ 369 (1460)
++ . .++ ++|+|+|.+.|.+.... .. ...++++|+++||+ .+.||+..+++|+.++.++
T Consensus 179 ---~~-------------~--~~~-vi~~~v~~~~~~~~~~~-~~-~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~ 237 (406)
T 2gek_A 179 ---LG-------------S--DAV-EIPNGVDVASFADAPLL-DG-YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVAR 237 (406)
T ss_dssp ---HS-------------S--CEE-ECCCCBCHHHHHTCCCC-TT-CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTT
T ss_pred ---cC-------------C--CcE-EecCCCChhhcCCCchh-hh-ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHH
Confidence 11 1 146 89999999888654211 11 11356799999999 9999999999999999988
Q ss_pred CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CC
Q psy775 370 HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RD 448 (1460)
Q Consensus 370 ~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rE 448 (1460)
+|+++ |+.+|.+ +. .++++. +.+.. +.+.+.|.++++++..+|+.||++|+||. .|
T Consensus 238 ~~~~~----l~i~G~~-----~~-~~l~~~----~~~~~---------~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e 294 (406)
T 2gek_A 238 FPDVE----ILIVGRG-----DE-DELREQ----AGDLA---------GHLRFLGQVDDATKASAMRSADVYCAPHLGGE 294 (406)
T ss_dssp STTCE----EEEESCS-----CH-HHHHHH----TGGGG---------GGEEECCSCCHHHHHHHHHHSSEEEECCCSCC
T ss_pred CCCeE----EEEEcCC-----cH-HHHHHH----HHhcc---------CcEEEEecCCHHHHHHHHHHCCEEEecCCCCC
Confidence 88753 5555532 22 333333 32221 12455799999999999999999999997 99
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|||++++||||| |.|+|+|..+|..+.+. .|++++|.|+++++++|.++++++...+++. +..++.+..++
T Consensus 295 ~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~-~~~~~~~~~~s 368 (406)
T 2gek_A 295 SFGIVLVEAMAA-----GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYV-ARASERVHRYD 368 (406)
T ss_dssp SSCHHHHHHHHH-----TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHH-HHHHHHGGGGB
T ss_pred CCchHHHHHHHc-----CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHHhCC
Confidence 999999999999 77889999988887775 3899999999999999999998655444444 44455555555
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=217.74 Aligned_cols=265 Identities=12% Similarity=0.160 Sum_probs=177.9
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc----cccc--CCC-------------cHHHHhhhcc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD----IFRL--FPW-------------SDEILQGMLG 271 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e----ifr~--LP~-------------r~eil~gLL~ 271 (1460)
..|+|.+|+++..+++.++++. ...+.++.+.+|-.++... .+.. +|. ....-..+..
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~---~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYA---ETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT 206 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHS---SSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHH
T ss_pred CCCEEEecccchhHHHHHHhhc---ccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhh
Confidence 5799999998887788877653 0136789999998654311 1111 010 1122223345
Q ss_pred CceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc-----------------ch
Q psy775 272 CDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA-----------------AP 334 (1460)
Q Consensus 272 aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~-----------------~~ 334 (1460)
||.|-..+....+.+.+.. +|..... .+.....++.++|+|||.+.|.+.... ..
T Consensus 207 ad~vi~~S~~~~~~~~~~~---~g~~~~~-----~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 1rzu_A 207 ATALSTVSPSYAEEILTAE---FGMGLEG-----VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278 (485)
T ss_dssp CSEEEESCHHHHHHTTSHH---HHTTCHH-----HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred cCEEEecCHhHHHHHhccc---cCcchHH-----HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHH
Confidence 7777777776555443210 0000000 000012357789999999888654211 01
Q ss_pred hhhc-----c-CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHh
Q psy775 335 RVID-----T-KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRIN 408 (1460)
Q Consensus 335 ~~~~-----~-~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN 408 (1460)
..++ . ++++|+++||+.+.||+..+++|+.++.+ ++ +.|+.+|.+. + .+++++++++.+.+
T Consensus 279 ~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g~----~---~~~~~l~~~~~~~~ 345 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGAGD----V---ALEGALLAAASRHH 345 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEECBC----H---HHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeCCc----h---HHHHHHHHHHHhCC
Confidence 1111 2 26799999999999999999999999876 33 4566666431 1 23455555555543
Q ss_pred cccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc------
Q psy775 409 GRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH------ 482 (1460)
Q Consensus 409 ~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~------ 482 (1460)
. .|+++.|. +.+++..+|+.||++|+||.+||||++++||||| |.|+|+|..+|..+.+.
T Consensus 346 ~--------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~-----G~PvI~s~~gg~~e~v~~~~~~~ 411 (485)
T 1rzu_A 346 G--------RVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY-----GCIPVVARTGGLADTVIDANHAA 411 (485)
T ss_dssp T--------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-----TCEEEEESSHHHHHHCCBCCHHH
T ss_pred C--------cEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC-----CCCEEEeCCCChhheeccccccc
Confidence 2 35666677 8889899999999999999999999999999999 78889999988888774
Q ss_pred ------ccEEECCCCHHHHHHHHHHHc---CCCHHHHHHH
Q psy775 483 ------EALICNPYEIDAAAEVIHRAL---TMPEDERTLR 513 (1460)
Q Consensus 483 ------~allVNP~D~~elA~AI~~aL---~m~~~er~~R 513 (1460)
.|++++|.|++++|++|.+++ +++...++++
T Consensus 412 ~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 451 (485)
T 1rzu_A 412 LASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQ 451 (485)
T ss_dssp HHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 379999999999999999999 5544433333
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.5e-20 Score=215.04 Aligned_cols=260 Identities=18% Similarity=0.215 Sum_probs=172.4
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|+++...+..++++ ..++.+.+|..++...- ..+..+-+.+..+|.+-+...++.+.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~-------~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~----- 189 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK-------KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP----- 189 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC-------CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT-----
T ss_pred CCCEEEEeccchhhHHHHHHh-------cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh-----
Confidence 469999999987666554432 26789999987764210 00111222222344443333322211
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc---chhhhc-----cCCeEEEEecCccccCCHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA---APRVID-----TKQKIVLGVDRLDYTKGLVHRLKA 362 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~---~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~A 362 (1460)
. +. ..++.++|+|||+..+...... ....++ .++++|+++||+.+.||+..+++|
T Consensus 190 -----------~----~~--~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a 252 (416)
T 2x6q_A 190 -----------E----LD--RNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEI 252 (416)
T ss_dssp -----------T----SC--TTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHH
T ss_pred -----------h----CC--ccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHH
Confidence 1 01 1356789999998766432111 111111 467899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcC---CCCHHHHHHHHHhcc
Q psy775 363 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYG---CISQDELASFYRDAA 439 (1460)
Q Consensus 363 f~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g---~v~~eeL~aLY~aAD 439 (1460)
+..+.+++|++ .|+++|.+...+ +++ .+.+++++.+.+.. ..|.+ .| .++++++..+|+.||
T Consensus 253 ~~~l~~~~~~~----~l~i~G~g~~~~-~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad 317 (416)
T 2x6q_A 253 YRKVKEKIPGV----QLLLVGVMAHDD-PEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASD 317 (416)
T ss_dssp HHHHHHHCTTC----EEEEEECCCTTC-HHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCS
T ss_pred HHHHHHhCCCe----EEEEEecCcccc-hhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCC
Confidence 99999999875 466667543221 222 33344444444432 13444 46 556899999999999
Q ss_pred EEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 440 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 440 V~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
++|+||.+||||++++||||| |.|+|+|..+|..+.+. .|++++ |++++|++|.++++++...++++.++
T Consensus 318 ~~v~ps~~E~~~~~~lEAma~-----G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~~~~~~~~~a 390 (416)
T 2x6q_A 318 VILQMSIREGFGLTVTEAMWK-----GKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKA 390 (416)
T ss_dssp EEEECCSSCSSCHHHHHHHHT-----TCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEEECCCcCCCccHHHHHHHc-----CCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999999999999999999 67789999988888774 388887 99999999999999665555555444
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
......+++
T Consensus 391 ~~~~~~~fs 399 (416)
T 2x6q_A 391 KERVRKNFI 399 (416)
T ss_dssp HHHHHHHTB
T ss_pred HHHHHHHcC
Confidence 444434555
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=216.28 Aligned_cols=264 Identities=17% Similarity=0.119 Sum_probs=177.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc----cccc--CC-------------CcHHHHhhhcc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD----IFRL--FP-------------WSDEILQGMLG 271 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e----ifr~--LP-------------~r~eil~gLL~ 271 (1460)
..|+|.+|+++..+++.+++.+ ..+.++.+.+|-.++... .+.. ++ .....-..+..
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAAR----GRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHT----TCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCEEEeeccchhHHHHHHhhc----cCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 4799999999988888877621 136899999998654211 1110 01 01122233345
Q ss_pred CceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeE--EEEEEeecccCchhhhhhhcc-----------------
Q psy775 272 CDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRT--VRIRPLPIAIPYERFVQLAQA----------------- 332 (1460)
Q Consensus 272 aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~--vkV~viPiGID~~~f~~~~~~----------------- 332 (1460)
+|.|-..+....+.+.+.. +|.... .. ..... .++.++|+|||.+.|.+....
T Consensus 205 ad~vi~~S~~~~~~~~~~~---~~~~~~--~~---~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQ---FAYGME--GL---LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN 276 (485)
T ss_dssp CSEEEESSHHHHHHTTSHH---HHTTCH--HH---HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHH
T ss_pred cCeEEecCHHHHHHHhccc---cCcchH--HH---HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHh
Confidence 7777777776555443210 010000 00 00011 357789999999888654211
Q ss_pred chhhhc-----c--CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy775 333 APRVID-----T--KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 405 (1460)
Q Consensus 333 ~~~~~~-----~--~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~ 405 (1460)
...+++ . ++++|+++||+++.||+..+++|++++.+ ++ +.|+++|.+. + ++++++++++.
T Consensus 277 ~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g~----~---~~~~~l~~~~~ 343 (485)
T 2qzs_A 277 KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAGD----P---VLQEGFLAAAA 343 (485)
T ss_dssp HHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEEC----H---HHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCCc----h---HHHHHHHHHHH
Confidence 011111 1 67899999999999999999999999876 33 4566666431 1 23455555555
Q ss_pred HHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---
Q psy775 406 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--- 482 (1460)
Q Consensus 406 ~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--- 482 (1460)
+.+. .|+++.|. +.+++..+|+.||++|+||.+||||++++||||| |.|+|+|..+|..+.+.
T Consensus 344 ~~~~--------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~-----G~PvI~s~~gg~~e~v~~~~ 409 (485)
T 2qzs_A 344 EYPG--------QVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY-----GTLPLVRRTGGLADTVSDCS 409 (485)
T ss_dssp HSTT--------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-----TCEEEEESSHHHHHHCCBCC
T ss_pred hCCC--------cEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC-----CCCEEECCCCCccceeccCc
Confidence 5431 36667777 8899999999999999999999999999999999 78889999988888774
Q ss_pred ---------ccEEECCCCHHHHHHHHHHHc---CCCHHHHHHH
Q psy775 483 ---------EALICNPYEIDAAAEVIHRAL---TMPEDERTLR 513 (1460)
Q Consensus 483 ---------~allVNP~D~~elA~AI~~aL---~m~~~er~~R 513 (1460)
.|++++|.|++++|++|.+++ +++...++++
T Consensus 410 ~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 452 (485)
T 2qzs_A 410 LENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQ 452 (485)
T ss_dssp HHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred cccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 479999999999999999999 5544443333
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=233.58 Aligned_cols=292 Identities=12% Similarity=0.063 Sum_probs=191.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHH-------------hhhccCceeee
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEIL-------------QGMLGCDMVGF 277 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil-------------~gLL~aDlIgF 277 (1460)
..|+|..|++.-.+++.+++++. ++++.+..|.-.+..-..... .+..+. ..+-.||.|-.
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-----gvP~V~T~Hsl~~~k~~~~~~-~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa 480 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-----GVTQCTIAHALEKTKYPDSDI-YWKKLDDKYHFSCQFTADIFAMNHTDFIIT 480 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-----TCCEEEECSCCHHHHSTTTTT-THHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-----CCCEEEEEecccccccccccc-hhhhHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 46999999777677777776654 578999999643221111111 111111 13455777777
Q ss_pred ccHHhHHHHHHHHHhhcCce--ecCCCcEEEECC---eEEEEEEeecccCchhhhhhhccch------------------
Q psy775 278 HIEDYCLNFVDCCQRRLGCR--VDRKNLLVEHGG---RTVRIRPLPIAIPYERFVQLAQAAP------------------ 334 (1460)
Q Consensus 278 ~t~~yar~FL~~~~riLg~~--~~~~~~~i~~~G---r~vkV~viPiGID~~~f~~~~~~~~------------------ 334 (1460)
.+...+....+.... ++.. .....+.-...| ..-++.++|+|||.+.|.+......
T Consensus 481 ~S~~~~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~ 559 (816)
T 3s28_A 481 STFQEIAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVE 559 (816)
T ss_dssp SCHHHHHCCSSSCCT-TGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCC
T ss_pred CCHHHHHHHHHHHHH-hhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhh
Confidence 776555432111000 0000 000000000001 1117899999999998876432211
Q ss_pred --hhh----ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC--CCChHHHHHHHHHHHHHHHH
Q psy775 335 --RVI----DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS--RTDVKEYQDLKEEMDQLVGR 406 (1460)
Q Consensus 335 --~~~----~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps--r~~~~ey~~L~~ev~~lv~~ 406 (1460)
+.. ..++++|+++||+++.||+..+++||.++.+.+|++ .|+++|.+. .....+..+..+++.+++.+
T Consensus 560 ~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~ 635 (816)
T 3s28_A 560 NKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEE 635 (816)
T ss_dssp BTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHH
Confidence 000 146789999999999999999999999998877764 467777554 22233444566677777766
Q ss_pred HhcccCCCCcccEEEEcC----CCCHHHHHHHHH-hccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc
Q psy775 407 INGRFTTPNWSPIRYIYG----CISQDELASFYR-DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM 481 (1460)
Q Consensus 407 IN~~fg~~~~~pIv~~~g----~v~~eeL~aLY~-aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L 481 (1460)
.+.. ..+.|.| .++.+++..+|+ +||++|+||.+||||++++||||| |.|+|+|..+|..+.+
T Consensus 636 lgL~-------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~-----G~PVIasd~GG~~EiV 703 (816)
T 3s28_A 636 YKLN-------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCKGGPAEII 703 (816)
T ss_dssp TTCB-------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT-----TCCEEEESSBTHHHHC
T ss_pred cCCC-------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc-----CCCEEEeCCCChHHHH
Confidence 5432 2344557 445699999998 689999999999999999999999 7788999999988888
Q ss_pred cc---cEEECCCCHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhcC
Q psy775 482 HE---ALICNPYEIDAAAEVIHRAL----TMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 482 ~~---allVNP~D~~elA~AI~~aL----~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+ |++|+|.|++++|++|.+++ .++...++++.++......+++
T Consensus 704 ~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fS 754 (816)
T 3s28_A 704 VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYT 754 (816)
T ss_dssp CBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCC
T ss_pred ccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCC
Confidence 43 89999999999999998877 6776666666555554446666
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-19 Score=206.53 Aligned_cols=262 Identities=16% Similarity=0.153 Sum_probs=175.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcH-HHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSD-EILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~-eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|++|......++.++.+++. +.+.++.+.+|-..+ ..+..-+... ..-..+-.+|.|-..+....+.+.+.
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~--~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 174 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMI--GERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHEL 174 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHT--TTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHHH
T ss_pred CCCEEEEcchhHHHHHHHHHHHhh--cCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 369999998765555555544331 235789999996422 1111122222 22233445898888887766655442
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEEEecCccccCCHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVLGVDRLDYTKGLVHRLKAFE 364 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af~ 364 (1460)
.+ ...++.++|+|+|++.|.+... ...++ .++++|+++||+.+.||+..+++|++
T Consensus 175 ----~~--------------~~~~~~vi~ngv~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~ 234 (394)
T 2jjm_A 175 ----VK--------------PNKDIQTVYNFIDERVYFKRDM--TQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFA 234 (394)
T ss_dssp ----TC--------------CSSCEEECCCCCCTTTCCCCCC--HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHH
T ss_pred ----hC--------------CcccEEEecCCccHHhcCCcch--HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHH
Confidence 11 1235678999999988764321 11111 45678999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEc
Q psy775 365 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 444 (1460)
Q Consensus 365 ~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vvp 444 (1460)
++.++ +++ .|+++|. ++..+++ ++++.+.+. .+-+.+.|. .+++..+|+.||++|+|
T Consensus 235 ~l~~~-~~~----~l~i~G~-----g~~~~~l----~~~~~~~~l-------~~~v~~~g~--~~~~~~~~~~adv~v~p 291 (394)
T 2jjm_A 235 KIVTE-VDA----KLLLVGD-----GPEFCTI----LQLVKNLHI-------EDRVLFLGK--QDNVAELLAMSDLMLLL 291 (394)
T ss_dssp HHHHS-SCC----EEEEECC-----CTTHHHH----HHHHHTTTC-------GGGBCCCBS--CSCTHHHHHTCSEEEEC
T ss_pred HHHhh-CCC----EEEEECC-----chHHHHH----HHHHHHcCC-------CCeEEEeCc--hhhHHHHHHhCCEEEec
Confidence 99776 433 4555552 2233333 333333321 111233463 57899999999999999
Q ss_pred cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 445 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 445 SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
|..||||++++||||| |.|+|+|..+|..+.+. .|++++|.|+++++++|.+++++++..++++.++ ++.+
T Consensus 292 s~~e~~~~~~~EAma~-----G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~-~~~~ 365 (394)
T 2jjm_A 292 SEKESFGLVLLEAMAC-----GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERA-RESV 365 (394)
T ss_dssp CSCCSCCHHHHHHHHT-----TCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHH-HHHH
T ss_pred cccCCCchHHHHHHhc-----CCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHH
Confidence 9999999999999999 67889999988888874 3899999999999999999998655444444444 4444
Q ss_pred -hhcC
Q psy775 522 -KHMN 525 (1460)
Q Consensus 522 -~~~~ 525 (1460)
..++
T Consensus 366 ~~~~s 370 (394)
T 2jjm_A 366 YEQFR 370 (394)
T ss_dssp HHHSC
T ss_pred HHhCC
Confidence 6666
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-18 Score=197.35 Aligned_cols=289 Identities=16% Similarity=0.181 Sum_probs=198.6
Q ss_pred Cceeecccccc-ccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHh-hcccCceeecccHhHHHHHHHHH
Q psy775 568 PLVWIHDYHLM-LAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQ-GMLGCDMVGFHIEDYCLNFVDCC 645 (1460)
Q Consensus 568 diIwIhDYhL~-LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~-~LL~aDlIGFqt~~yar~FL~~c 645 (1460)
|+|++|+.... ++...++ ..+ ..++.+..|-... .+...+..+.+++ .+-.+|.|-+.+....+.+.+..
T Consensus 88 Dvv~~~~~~~~~~~~~~~~----~~~-~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 159 (394)
T 3okp_A 88 DNVWFGAAAPLALMAGTAK----QAG-ASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAF 159 (394)
T ss_dssp SEEEESSCTTGGGGHHHHH----HTT-CSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHH
T ss_pred CEEEECCcchHHHHHHHHH----hcC-CCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhc
Confidence 68999876543 3333333 322 2357777785421 1112223333333 33568999888887766655421
Q ss_pred HHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhH
Q psy775 646 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYER 725 (1460)
Q Consensus 646 ~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r 725 (1460)
+ ...++.++|+|||.+.|.+.... ....+|+.++++
T Consensus 160 ----~--------------~~~~~~vi~ngv~~~~~~~~~~~-----------------------~~~~~~~~~~~~--- 195 (394)
T 3okp_A 160 ----G--------------SHPTFEHLPSGVDVKRFTPATPE-----------------------DKSATRKKLGFT--- 195 (394)
T ss_dssp ----C--------------SSSEEEECCCCBCTTTSCCCCHH-----------------------HHHHHHHHTTCC---
T ss_pred ----C--------------CCCCeEEecCCcCHHHcCCCCch-----------------------hhHHHHHhcCCC---
Confidence 1 12357889999998777531110 113556665543
Q ss_pred HHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 726 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 726 ~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
.++++|+++||+.+.||+...++|++++.+++|++ .|+.+|.+ + ..+++++++.
T Consensus 196 -------------~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g-----~----~~~~l~~~~~ 249 (394)
T 3okp_A 196 -------------DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA----QLLIVGSG-----R----YESTLRRLAT 249 (394)
T ss_dssp -------------TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTC----EEEEECCC-----T----THHHHHHHTG
T ss_pred -------------cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCe----EEEEEcCc-----h----HHHHHHHHHh
Confidence 55689999999999999999999999999999875 46656542 2 2234444442
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCc-------cCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR-------DGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlr-------EGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
.++. .+.+.|.++++++..+|+.||++|+||.. |||+++++|||+| +.|+|+|..+|..
T Consensus 250 ~~~~---------~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~ 315 (394)
T 3okp_A 250 DVSQ---------NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC-----GVPVIAGTSGGAP 315 (394)
T ss_dssp GGGG---------GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT-----TCCEEECSSTTGG
T ss_pred cccC---------eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHc-----CCCEEEeCCCChH
Confidence 2322 26778999999999999999999999999 9999999999999 7899999988876
Q ss_pred hhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHH
Q psy775 879 EQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRA 958 (1460)
Q Consensus 879 ~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~a 958 (1460)
+.+. . ..+++++|.|+++++++|.++
T Consensus 316 e~i~-----------------------------------------------------~-~~g~~~~~~d~~~l~~~i~~l 341 (394)
T 3okp_A 316 ETVT-----------------------------------------------------P-ATGLVVEGSDVDKLSELLIEL 341 (394)
T ss_dssp GGCC-----------------------------------------------------T-TTEEECCTTCHHHHHHHHHHH
T ss_pred HHHh-----------------------------------------------------c-CCceEeCCCCHHHHHHHHHHH
Confidence 6110 1 146899999999999999999
Q ss_pred hCCCHHHHHHHHHHHHhHHH-hcCHHHHHHHHHHHHhhhhhccCCC
Q psy775 959 LTMPEDERTLRMNYLRKREK-VHDVNYWMRSFLKGMGTLITEDGDD 1003 (1460)
Q Consensus 959 L~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~~~~~~~ 1003 (1460)
++.+...++.+.+. ++++. .++++.+++++++-+++...++...
T Consensus 342 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~~ 386 (394)
T 3okp_A 342 LDDPIRRAAMGAAG-RAHVEAEWSWEIMGERLTNILQSEPRKLAAA 386 (394)
T ss_dssp HTCHHHHHHHHHHH-HHHHHHHTBHHHHHHHHHHHHHSCCC-----
T ss_pred HhCHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHhccCcchh
Confidence 99655444444444 55555 5899999999999998877544433
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.3e-18 Score=200.27 Aligned_cols=300 Identities=16% Similarity=0.134 Sum_probs=204.0
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcc--ccccC---ccHHHHH--hhcccCceeecccHhHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD--IFRLF---PWSDEIL--QGMLGCDMVGFHIEDYCLN 640 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e--~fr~l---P~r~eIL--~~LL~aDlIGFqt~~yar~ 640 (1460)
|+|++|++...+++..+.+ ....++.+.+|-.++... ..... +.....+ ..+-.+|.|-+.+....+.
T Consensus 124 Div~~~~~~~~~~~~~~~~-----~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 198 (438)
T 3c48_A 124 DLIHSHYWLSGQVGWLLRD-----LWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQD 198 (438)
T ss_dssp SEEEEEHHHHHHHHHHHHH-----HHTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred CEEEeCCccHHHHHHHHHH-----HcCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHH
Confidence 7999998765444433331 124677888887532111 10000 1111111 2334689998888877666
Q ss_pred HHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhc
Q psy775 641 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIA 720 (1460)
Q Consensus 641 FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~ 720 (1460)
+.+. +|.+ ..++.++|+|||.+.|.+.... ..+.+|+.++
T Consensus 199 ~~~~----~g~~-------------~~k~~vi~ngvd~~~~~~~~~~-----------------------~~~~~r~~~~ 238 (438)
T 3c48_A 199 LMHH----YDAD-------------PDRISVVSPGADVELYSPGNDR-----------------------ATERSRRELG 238 (438)
T ss_dssp HHHH----HCCC-------------GGGEEECCCCCCTTTSCCC---------------------------CHHHHHHTT
T ss_pred HHHH----hCCC-------------hhheEEecCCccccccCCcccc-----------------------hhhhhHHhcC
Confidence 5542 2321 1246789999998776432110 0023555554
Q ss_pred CchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHH
Q psy775 721 IPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 800 (1460)
Q Consensus 721 i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el 800 (1460)
++ .++++|+++||+.+.||+...++|++++.+++|+. ++.|+.+|.+... + .+.+++
T Consensus 239 ~~----------------~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~~-g----~~~~~l 295 (438)
T 3c48_A 239 IP----------------LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR--NLRVIICGGPSGP-N----ATPDTY 295 (438)
T ss_dssp CC----------------SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHH
T ss_pred CC----------------CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCc--ceEEEEEeCCCCC-C----cHHHHH
Confidence 32 56789999999999999999999999999999853 4677777764321 1 233556
Q ss_pred HHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchh
Q psy775 801 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 880 (1460)
Q Consensus 801 ~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~ 880 (1460)
++++.+.+.. +.+.+.|.++++++..+|+.||++|+||..|||+++++|||+| +.|+|+|..+|..+.
T Consensus 296 ~~~~~~~~l~-------~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~PvI~~~~~~~~e~ 363 (438)
T 3c48_A 296 RHMAEELGVE-------KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIA 363 (438)
T ss_dssp HHHHHHTTCT-------TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHT-----TCCEEEESCTTHHHH
T ss_pred HHHHHHcCCC-------CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHc-----CCCEEecCCCChhHH
Confidence 6666655432 2267789999999999999999999999999999999999999 789999998887661
Q ss_pred hhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhC
Q psy775 881 MHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT 960 (1460)
Q Consensus 881 L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~ 960 (1460)
+. .-..+++++|.|++++|++|.++++
T Consensus 364 i~-----------------------------------------------------~~~~g~~~~~~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 364 VA-----------------------------------------------------EGETGLLVDGHSPHAWADALATLLD 390 (438)
T ss_dssp SC-----------------------------------------------------BTTTEEEESSCCHHHHHHHHHHHHH
T ss_pred hh-----------------------------------------------------CCCcEEECCCCCHHHHHHHHHHHHc
Confidence 11 0134689999999999999999998
Q ss_pred CCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC
Q psy775 961 MPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG 1001 (1460)
Q Consensus 961 m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~ 1001 (1460)
.+...++.. +..++++..+++..+++++++.+++...+.+
T Consensus 391 ~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 391 DDETRIRMG-EDAVEHARTFSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp CHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHhhhcc
Confidence 654434433 4446677779999999999998888876543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.8e-18 Score=210.95 Aligned_cols=324 Identities=14% Similarity=0.128 Sum_probs=199.6
Q ss_pred CceeeccccccccHHHHHHHHhhc--CcCceEEEEeeCC-----CCCccc--cccCccH-------------------HH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQ--NLKFKLGFFLHIP-----FPPWDI--FRLFPWS-------------------DE 619 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~--~~~~kigfFLHiP-----fP~~e~--fr~lP~r-------------------~e 619 (1460)
+++-.||||--++|-+++...... ....+..|..|.. ||.... ....+.. .-
T Consensus 155 dIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 234 (536)
T 3vue_A 155 VVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINW 234 (536)
T ss_dssp EEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEH
T ss_pred EEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhH
Confidence 566689999999999998544322 1367899999964 211111 0011110 12
Q ss_pred HHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhh
Q psy775 620 ILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIV 699 (1460)
Q Consensus 620 IL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~ 699 (1460)
+-.++..||.|---++.|++..++.-. .|.. .....+..+|.++|+|||++.|.+.........
T Consensus 235 ~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~-------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~------- 298 (536)
T 3vue_A 235 MKAGILEADRVLTVSPYYAEELISGIA--RGCE-------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAK------- 298 (536)
T ss_dssp HHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS-------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCC-------
T ss_pred HHHHHHhccEEEEcCHHHhhhhhcccc--cccc-------cccccccCCeEEEECCcchhhcCCCCccccccc-------
Confidence 334566778887777777765433100 0111 111234556899999999998875322110000
Q ss_pred ccccccccchhh---HHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCC
Q psy775 700 LGVDRLDYTKGL---IESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 776 (1460)
Q Consensus 700 ~g~~~~~~~~~~---~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~k 776 (1460)
.+..+..+.+ -..+++.+|++ ..++.++|++|||+.+.||+..+++|++++++++++
T Consensus 299 --~~~~~~~~~K~~~k~~l~~~~gl~--------------~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~---- 358 (536)
T 3vue_A 299 --YDATTAIEAKALNKEALQAEAGLP--------------VDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQ---- 358 (536)
T ss_dssp --CCTTTHHHHHHHHHHHHHHHTTSC--------------CCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCE----
T ss_pred --cchhhhhhhhHHHHHHHHHhcCCC--------------CCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCe----
Confidence 0000000000 02233333322 235678999999999999999999999999776543
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcccee
Q psy775 777 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKE 856 (1460)
Q Consensus 777 VvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~E 856 (1460)
|+.+|.+. + ....+++.+..+.+.+ +.+.+..+.+++..+|+.||++|+||.+||||++.+|
T Consensus 359 --l~l~G~G~----~---~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lE 420 (536)
T 3vue_A 359 --IVLLGTGK----K---KFEKLLKSMEEKYPGK---------VRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQ 420 (536)
T ss_dssp --EEEECCBC----H---HHHHHHHHHHHHSTTT---------EEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHH
T ss_pred --EEEEeccC----c---hHHHHHHHHHhhcCCc---------eEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHH
Confidence 44444332 1 2333444444444444 5567788999999999999999999999999999999
Q ss_pred eeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCccc
Q psy775 857 FVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 936 (1460)
Q Consensus 857 ymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~ 936 (1460)
||+| +.|+|+|..+|..++.. . ...|..+-.+
T Consensus 421 Ama~-----G~PvI~s~~gG~~e~V~------d------------------------------g~~G~~~~~~------- 452 (536)
T 3vue_A 421 GMRY-----GTPCACASTGGLVDTVI------E------------------------------GKTGFHMGRL------- 452 (536)
T ss_dssp HHHT-----TCCEEECSCTHHHHHCC------B------------------------------TTTEEECCCC-------
T ss_pred HHHc-----CCCEEEcCCCCchheee------C------------------------------CCCccccccC-------
Confidence 9999 78999999999887221 0 0111111111
Q ss_pred ccceEEeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 937 MHEALICNPYEIDAAAEVIHRALTM--PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 937 l~~allVnP~d~~~iA~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
-.++.+|+|.|++++|++|.+||.. .+..++++.+++. +.+++++-+++..+-+.++
T Consensus 453 ~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~---~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 453 SVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMN---QDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp CSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHH---SCCSSHHHHHHHHHHHHTT
T ss_pred CCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHh
Confidence 1245789999999999999999863 3333333333332 3567777777776666554
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=194.96 Aligned_cols=205 Identities=12% Similarity=0.109 Sum_probs=148.7
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++++|+++||+.+.||+...++||.++.+++|++ .|+.+|.+...... ++++++++++.+.+-.-.-.-+..+
T Consensus 183 ~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~----~l~ivG~g~~~~~~---~l~~~~~~~~~~~~l~~~v~~l~~v 255 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDA----KVRFLCNSHHESKF---DLHSIALRELVASGVDNVFTHLNKI 255 (413)
T ss_dssp TSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTC----CEEEEEECCTTCSC---CHHHHHHHHHHHHTCSCHHHHHTTE
T ss_pred CceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCc----EEEEEeCCcccchh---hHHHHHHHHHHHcCcccccccccce
Confidence 6789999999999999999999999999999986 46666755432211 2456666666665433100000126
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
+++.|.++.+++..+|+.||++|+||..||||++++||||| +.|+|+|..+|..+.+. +
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~-----G~PvI~s~~~g~~e~v~------~---------- 314 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVL-----GKPLIISAVGGADDYFS------G---------- 314 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTT-----TCCEEEECCHHHHHHSC------T----------
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHc-----CCCEEEcCCCChHHHHc------c----------
Confidence 88899999999999999999999999999999999999999 78999999988777221 1
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEecc----ccCCcccccceE--EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSP----FAGAGEQMHEAL--ICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~se----f~G~~~~l~~al--lVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+...+|... ..| ..++ +++|.|++++|++| ++++.+...++.. +..
T Consensus 315 ---------------------~~~~~i~~~~~~~~~~-----~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~-~~a 366 (413)
T 3oy2_A 315 ---------------------DCVYKIKPSAWISVDD-----RDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYG-KRV 366 (413)
T ss_dssp ---------------------TTSEEECCCEEEECTT-----TCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHH-HHH
T ss_pred ---------------------Cccccccccccccccc-----ccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHH-HHH
Confidence 000000000 001 2246 89999999999999 9998654444444 444
Q ss_pred HhHH-HhcCHHHHHHHHHHHHhhhhhcc
Q psy775 974 RKRE-KVHDVNYWMRSFLKGMGTLITED 1000 (1460)
Q Consensus 974 ~~~v-~~~~~~~W~~~~l~~l~~~~~~~ 1000 (1460)
++++ ..++++.+++++++-+++...+.
T Consensus 367 ~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 367 QDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp HHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 6665 57799999999999998887543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-18 Score=205.02 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=148.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCC------h-hHHHHHHHHHHHHHHHHhccC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD------V-KEYQDLKEEMDQLVGRINGRF 811 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~------~-~~y~~l~~el~~lv~~IN~~~ 811 (1460)
.++++|+++||+.+.||+...++|+.++.+++|+. +.|+.+|... +. . ....++.+++++++.+.+..
T Consensus 260 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~- 334 (499)
T 2r60_A 260 MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR- 334 (499)
T ss_dssp TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-
T ss_pred CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-
Confidence 46788999999999999999999999998877752 4566555421 11 0 22334567788888776543
Q ss_pred CCCCCccEEEEcCCCCHHHHHHHHHHc----cEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhc
Q psy775 812 TTPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALIC 887 (1460)
Q Consensus 812 ~~~~~~pvv~~~g~v~~eel~Aly~~A----Dv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~v 887 (1460)
+.+.|.|.++++++..+|+.| |++|+||..|||+++++||||| +.|+|+|..+|..+.+.
T Consensus 335 ------~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~-----G~PvI~s~~~g~~e~v~----- 398 (499)
T 2r60_A 335 ------GKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS-----GLPAVVTRNGGPAEILD----- 398 (499)
T ss_dssp ------TTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT-----TCCEEEESSBHHHHHTG-----
T ss_pred ------ceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc-----CCCEEEecCCCHHHHhc-----
Confidence 226678999999999999999 9999999999999999999999 78999999887666211
Q ss_pred CcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHH
Q psy775 888 NPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERT 967 (1460)
Q Consensus 888 nP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~ 967 (1460)
.-..+++++|.|++++|++|.++++.+...++
T Consensus 399 ------------------------------------------------~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~ 430 (499)
T 2r60_A 399 ------------------------------------------------GGKYGVLVDPEDPEDIARGLLKAFESEETWSA 430 (499)
T ss_dssp ------------------------------------------------GGTSSEEECTTCHHHHHHHHHHHHSCHHHHHH
T ss_pred ------------------------------------------------CCceEEEeCCCCHHHHHHHHHHHHhCHHHHHH
Confidence 00246899999999999999999996544444
Q ss_pred HHHHHHHhHHHh-cCHHHHHHHHHHHHhhhhhccC
Q psy775 968 LRMNYLRKREKV-HDVNYWMRSFLKGMGTLITEDG 1001 (1460)
Q Consensus 968 ~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~~ 1001 (1460)
... ..++++.+ +++..+++++++-+.+...+..
T Consensus 431 ~~~-~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 464 (499)
T 2r60_A 431 YQE-KGKQRVEERYTWQETARGYLEVIQEIADRKD 464 (499)
T ss_dssp HHH-HHHHHHHHHSBHHHHHHHHHHHHHHHHHC--
T ss_pred HHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 443 44566655 9999999999999888776433
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-17 Score=177.88 Aligned_cols=182 Identities=17% Similarity=0.208 Sum_probs=134.6
Q ss_pred eecccCchhhh--hhhc----cchhhhc----cCCeEEEEecCcc-ccCCHHHHHHHHHHHH--HhCCCCCCcEEEEEEE
Q psy775 317 LPIAIPYERFV--QLAQ----AAPRVID----TKQKIVLGVDRLD-YTKGLVHRLKAFETLL--EKHPEHLEKVTLLQIA 383 (1460)
Q Consensus 317 iPiGID~~~f~--~~~~----~~~~~~~----~~~kvIL~VgRLd-~~KGI~~lL~Af~~lL--~~~P~~~~kvvLvqig 383 (1460)
+|+|||.+.|. +... .....++ .+.++|+++||+. +.||+..+++|+.++. +++|++ .|+.+|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~----~l~i~G 77 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFIIIG 77 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE----EEEEEC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCe----EEEEEC
Confidence 68999999997 5421 0112222 4667999999999 9999999999999997 777764 466565
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccC
Q psy775 384 VPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQIN 463 (1460)
Q Consensus 384 ~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~ 463 (1460)
... + +..+++.+++.+.+ .|++..|.++++++..+|+.||++++||..||||++++|||||
T Consensus 78 ~~~----~---~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~--- 138 (200)
T 2bfw_A 78 KGD----P---ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL--- 138 (200)
T ss_dssp CBC----H---HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT---
T ss_pred CCC----h---HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC---
Confidence 321 1 22344444444433 2444379999999999999999999999999999999999999
Q ss_pred CCCCeEEEcCCCCchhccc--ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 464 EPPGVLIVSPFAGAGEQMH--EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 464 ~~~GvlVlSe~aGaa~~L~--~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
|.|+|+|..+|..+.+. .|++++|.|+++++++|.++++|.+++++...+..++.+.+
T Consensus 139 --G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 139 --GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp --TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred --CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 78889999988888772 38999999999999999999995555554444444554443
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=196.23 Aligned_cols=283 Identities=18% Similarity=0.196 Sum_probs=186.6
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 647 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~r 647 (1460)
|+|.+|+++...+...++ ...++.+..|..++.+.. ...+.+-+.+..+|.+-+.+.++.+.
T Consensus 128 Dvv~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~------- 189 (416)
T 2x6q_A 128 DYVLVHDPQPAALIEFYE-------KKSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP------- 189 (416)
T ss_dssp SEEEEESSTTGGGGGGSC-------CCSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT-------
T ss_pred CEEEEeccchhhHHHHHH-------hcCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh-------
Confidence 799999987655433222 126788888876543210 01111222223444443333322211
Q ss_pred HhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHH
Q psy775 648 RLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFV 727 (1460)
Q Consensus 648 lLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~ 727 (1460)
. +.. .++.++|+|||+..|..... + ....+.+|+.++++
T Consensus 190 ---------~----~~~--~~~~vi~ngvd~~~~~~~~~--~-------------------~~~~~~~r~~~~~~----- 228 (416)
T 2x6q_A 190 ---------E----LDR--NKAVIMPPSIDPLSEKNVEL--K-------------------QTEILRILERFDVD----- 228 (416)
T ss_dssp ---------T----SCT--TTEEECCCCBCTTSTTTSCC--C-------------------HHHHHHHHHHTTCC-----
T ss_pred ---------h----CCc--cceEEeCCCCChhhhccccc--C-------------------hhhHHHHHHHhCCC-----
Confidence 1 011 24668999999866542110 0 01123556655543
Q ss_pred HHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q psy775 728 QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 807 (1460)
Q Consensus 728 ~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I 807 (1460)
.++++|+++||+.+.||+..+++|+..+.+++|++ .|+.+|.+...+ + ...+.+++++.+.
T Consensus 229 -----------~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g~~~~-~---~~~~~l~~~~~~~ 289 (416)
T 2x6q_A 229 -----------PEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGV----QLLLVGVMAHDD-P---EGWIYFEKTLRKI 289 (416)
T ss_dssp -----------TTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTC----EEEEEECCCTTC-H---HHHHHHHHHHHHH
T ss_pred -----------CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEEecCcccc-h---hHHHHHHHHHHHh
Confidence 56789999999999999999999999999999875 577777654222 2 2334566666666
Q ss_pred hccCCCCCCccEEEEcC---CCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhh
Q psy775 808 NGRFTTPNWSPIRYIYG---CISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEA 884 (1460)
Q Consensus 808 N~~~~~~~~~pvv~~~g---~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~ 884 (1460)
+.. +-+.+.| .++++++..+|+.||++|.||..|||+++++||||| +.|+|+|..+|..+.+.
T Consensus 290 ~~~-------~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~-----G~PvI~~~~~g~~e~i~-- 355 (416)
T 2x6q_A 290 GED-------YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK-----GKPVIGRAVGGIKFQIV-- 355 (416)
T ss_dssp TTC-------TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT-----TCCEEEESCHHHHHHCC--
T ss_pred CCC-------CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc-----CCCEEEccCCCChhhee--
Confidence 542 1155555 456899999999999999999999999999999999 78999999887666110
Q ss_pred hhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 885 LICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 885 l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
+ -..+++++ |++++|++|.++++.+..
T Consensus 356 -------------------------------------------~--------~~~g~l~~--d~~~la~~i~~ll~~~~~ 382 (416)
T 2x6q_A 356 -------------------------------------------D--------GETGFLVR--DANEAVEVVLYLLKHPEV 382 (416)
T ss_dssp -------------------------------------------B--------TTTEEEES--SHHHHHHHHHHHHHCHHH
T ss_pred -------------------------------------------c--------CCCeEEEC--CHHHHHHHHHHHHhCHHH
Confidence 0 13467887 999999999999986554
Q ss_pred HHHHHHHHHHhHH-HhcCHHHHHHHHHHHHhhh
Q psy775 965 ERTLRMNYLRKRE-KVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 965 er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 996 (1460)
.++.+.+. ++++ ..+++..+++++++-+++.
T Consensus 383 ~~~~~~~a-~~~~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 383 SKEMGAKA-KERVRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHHHHH-HHHHHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHHHHH-HHHHHHHcCHHHHHHHHHHHHHHh
Confidence 44444444 5555 4789999999888877654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=191.35 Aligned_cols=209 Identities=12% Similarity=-0.016 Sum_probs=155.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|.++..++. .+ ..+.+ .+.+|-.++.+.. +|.|-+.+....+.+.+
T Consensus 84 ~~Dvi~~~~~~~~~~~---~~-----~~~~p-v~~~h~~~~~~~~----------------~d~ii~~S~~~~~~~~~-- 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA---GL-----PPGTA-FISSHHFTTRPVN----------------PVGCTYSSRAQRAHCGG-- 136 (342)
T ss_dssp CCSEEEECSSSSSCST---TC-----CTTCE-EEEEECSSSBCSC----------------CTTEEESCHHHHHHTTC--
T ss_pred CCCEEEECCchhhHHH---Hh-----hcCCC-EEEecCCCCCccc----------------ceEEEEcCHHHHHHHhc--
Confidence 4799999998754432 11 23567 8899988764321 88888888755443322
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
..++.++|+|+|.+.|.+.... ..++++|+++||+.+.||+..+++|++++
T Consensus 137 --------------------~~~~~vi~ngvd~~~~~~~~~~-----~~~~~~i~~vG~~~~~Kg~~~li~a~~~~---- 187 (342)
T 2iuy_A 137 --------------------GDDAPVIPIPVDPARYRSAADQ-----VAKEDFLLFMGRVSPHKGALEAAAFAHAC---- 187 (342)
T ss_dssp --------------------CTTSCBCCCCBCGGGSCCSTTC-----CCCCSCEEEESCCCGGGTHHHHHHHHHHH----
T ss_pred --------------------CCceEEEcCCCChhhcCccccc-----CCCCCEEEEEeccccccCHHHHHHHHHhc----
Confidence 1235678999999887653221 13456899999999999999999999886
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC----
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL---- 446 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl---- 446 (1460)
++ .|+.+|.+ +..+ ++++++.+.+. . +.+.|.++++++..+|+.||++|+||.
T Consensus 188 -~~----~l~i~G~g-----~~~~----~l~~~~~~~~~--------~-v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~ 244 (342)
T 2iuy_A 188 -GR----RLVLAGPA-----WEPE----YFDEITRRYGS--------T-VEPIGEVGGERRLDLLASAHAVLAMSQAVTG 244 (342)
T ss_dssp -TC----CEEEESCC-----CCHH----HHHHHHHHHTT--------T-EEECCCCCHHHHHHHHHHCSEEEECCCCCCC
T ss_pred -Cc----EEEEEeCc-----ccHH----HHHHHHHHhCC--------C-EEEeccCCHHHHHHHHHhCCEEEECCccccc
Confidence 33 35555532 2222 33334444432 2 445799999999999999999999999
Q ss_pred ------CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-----ccEEECCCCHHHHHHHHHHHcC
Q psy775 447 ------RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-----EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 447 ------rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-----~allVNP~D~~elA~AI~~aL~ 504 (1460)
.||||++++||||| |.|+|+|..+|..+.+. .|++++| |+++++++|.++++
T Consensus 245 ~~~~~~~E~~~~~~~EAma~-----G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 245 PWGGIWCEPGATVVSEAAVS-----GTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA 307 (342)
T ss_dssp TTCSCCCCCCCHHHHHHHHT-----TCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC
T ss_pred ccccccccCccHHHHHHHhc-----CCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH
Confidence 89999999999999 67889999988888773 2899999 99999999999987
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=193.24 Aligned_cols=324 Identities=12% Similarity=0.118 Sum_probs=197.6
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcc----cccc--Ccc-------------HHHHHhhcccC
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD----IFRL--FPW-------------SDEILQGMLGC 627 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e----~fr~--lP~-------------r~eIL~~LL~a 627 (1460)
.|+|.+|+++..+++..++.. .....++.+.+|-.++... .+.. ++. ..-.-..+-.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~---~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 207 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYA---ETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTA 207 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHS---SSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHC
T ss_pred CCEEEecccchhHHHHHHhhc---ccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhc
Confidence 379999999877777666521 1245678888887543210 0000 000 01111223447
Q ss_pred ceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccccccc
Q psy775 628 DMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDY 707 (1460)
Q Consensus 628 DlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~ 707 (1460)
|.|-..+....+.+.+.. .|..... .++....++.++|+|||.+.|.+..... .. ...+..+.
T Consensus 208 d~vi~~S~~~~~~~~~~~---~g~~~~~-----~~~~~~~~~~vi~ngvd~~~~~~~~~~~--~~-------~~~~~~~~ 270 (485)
T 1rzu_A 208 TALSTVSPSYAEEILTAE---FGMGLEG-----VIGSRAHVLHGIVNGIDADVWNPATDHL--IH-------DNYSAANL 270 (485)
T ss_dssp SEEEESCHHHHHHTTSHH---HHTTCHH-----HHHTTGGGEEECCCCBCTTTSCTTTCTT--SS-------SCCBTTBC
T ss_pred CEEEecCHhHHHHHhccc---cCcchHH-----HHHhhcCCceEEcCCCcccccCCccccc--cc-------ccccccch
Confidence 777776666555543210 0000000 0000123477899999998876432100 00 00000000
Q ss_pred --chhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcC
Q psy775 708 --TKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 785 (1460)
Q Consensus 708 --~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~p 785 (1460)
..+..+.+|++++++ ..++++|+++||+.+.||+..+++||.++.+ + ++.|+.+|.+
T Consensus 271 ~~~~~~~~~~r~~~~~~---------------~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g 329 (485)
T 1rzu_A 271 KNRALNKKAVAEHFRID---------------DDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--L----GGRLVVLGAG 329 (485)
T ss_dssp TTHHHHHHHHHHHHTCC---------------CSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--T----TCEEEEEECB
T ss_pred hhHHHhHHHHHHhcCCC---------------CCCCeEEEEEccCccccCHHHHHHHHHHHHh--c----CceEEEEeCC
Confidence 001123455555543 1125699999999999999999999999866 3 3567777754
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCC
Q psy775 786 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEP 865 (1460)
Q Consensus 786 sr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~ 865 (1460)
. + .+++++++++.+.+. .|+++.|. +.+++..+|+.||++|+||..||||++++|||||
T Consensus 330 ~----~---~~~~~l~~~~~~~~~--------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~----- 388 (485)
T 1rzu_A 330 D----V---ALEGALLAAASRHHG--------RVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY----- 388 (485)
T ss_dssp C----H---HHHHHHHHHHHHTTT--------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-----
T ss_pred c----h---HHHHHHHHHHHhCCC--------cEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC-----
Confidence 2 1 345667777766532 25557777 8889999999999999999999999999999999
Q ss_pred CceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC
Q psy775 866 PGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP 945 (1460)
Q Consensus 866 ~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP 945 (1460)
+.|+|+|..+|..+.+. +.+.+. +.. ....+++++|
T Consensus 389 G~PvI~s~~gg~~e~v~------~~~~~~-----------------------------------~~~---~~~~G~l~~~ 424 (485)
T 1rzu_A 389 GCIPVVARTGGLADTVI------DANHAA-----------------------------------LAS---KAATGVQFSP 424 (485)
T ss_dssp TCEEEEESSHHHHHHCC------BCCHHH-----------------------------------HHT---TCCCBEEESS
T ss_pred CCCEEEeCCCChhheec------cccccc-----------------------------------ccc---cCCcceEeCC
Confidence 78999999988776211 000000 000 0024689999
Q ss_pred CCHHHHHHHHHHHh---CCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhc
Q psy775 946 YEIDAAAEVIHRAL---TMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 946 ~d~~~iA~ai~~aL---~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
.|++++|++|.+++ +.+...++.+.+. ++ ..++++..++++++-+.+....
T Consensus 425 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~-~~--~~fs~~~~~~~~~~~y~~~~~~ 478 (485)
T 1rzu_A 425 VTLDGLKQAIRRTVRYYHDPKLWTQMQKLG-MK--SDVSWEKSAGLYAALYSQLISK 478 (485)
T ss_dssp CSHHHHHHHHHHHHHHHTCHHHHHHHHHHH-HT--CCCBHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HH--HhCChHHHHHHHHHHHHHhhCC
Confidence 99999999999999 5444333333333 22 6789999999988888776643
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=192.99 Aligned_cols=326 Identities=16% Similarity=0.123 Sum_probs=197.3
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcc----cccc--Cc-------------cHHHHHhhcccC
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD----IFRL--FP-------------WSDEILQGMLGC 627 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e----~fr~--lP-------------~r~eIL~~LL~a 627 (1460)
.|+|.+|+++..+++..+.. .....++.+.+|-.++... .+.. ++ ...-.-..+-.+
T Consensus 130 ~Divh~~~~~~~~~~~~~~~----~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 205 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAA----RGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYA 205 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHH----TTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHC
T ss_pred CCEEEeeccchhHHHHHHhh----ccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhc
Confidence 37999999987776665541 2356788888887532210 0000 00 001111223457
Q ss_pred ceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeE--EEEEEeeCCCChhHHhHHHhcCccccccchhhhcccccc
Q psy775 628 DMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRT--VRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRL 705 (1460)
Q Consensus 628 DlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~--v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~ 705 (1460)
|.|-..+...++.+.+.. .|..... .+ .... .++.++|+|||.+.|.+..... .. .+. +.+..
T Consensus 206 d~vi~~S~~~~~~~~~~~---~~~~~~~---~~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~--~~-~~~----~~~~~ 270 (485)
T 2qzs_A 206 DHITAVSPTYAREITEPQ---FAYGMEG---LL--QQRHREGRLSGVLNGVDEKIWSPETDLL--LA-SRY----TRDTL 270 (485)
T ss_dssp SEEEESSHHHHHHTTSHH---HHTTCHH---HH--HHHHHTTCEEECCCCCCTTTSCTTTCTT--SS-SCC----CTTCG
T ss_pred CeEEecCHHHHHHHhccc---cCcchHH---HH--HhhccCCceEEEecCCCccccCcccccc--cc-ccc----cccch
Confidence 777777766555443210 0100000 00 0011 3477899999998876432100 00 000 00000
Q ss_pred ccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcC
Q psy775 706 DYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 785 (1460)
Q Consensus 706 ~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~p 785 (1460)
.......+.+|++++++ ...++++|+++||+++.||+..+++|++++.+ + ++.|+.+|.+
T Consensus 271 ~~~~~~~~~~r~~~~~~--------------~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g 330 (485)
T 2qzs_A 271 EDKAENKRQLQIAMGLK--------------VDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--Q----GGQLALLGAG 330 (485)
T ss_dssp GGGHHHHHHHHHHHTCC--------------CCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--T----TCEEEEEEEE
T ss_pred hHHHHhHHHHHHHcCCC--------------CCCCCeEEEEeccCccccCHHHHHHHHHHHhh--C----CcEEEEEeCC
Confidence 00011124555555433 00267899999999999999999999999876 3 3567777754
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCC
Q psy775 786 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEP 865 (1460)
Q Consensus 786 sr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~ 865 (1460)
. + .+++++++++.+.+. .|+++.|. +.+++..+|+.||++|+||..||||++++|||||
T Consensus 331 ~----~---~~~~~l~~~~~~~~~--------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~----- 389 (485)
T 2qzs_A 331 D----P---VLQEGFLAAAAEYPG--------QVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY----- 389 (485)
T ss_dssp C----H---HHHHHHHHHHHHSTT--------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-----
T ss_pred c----h---HHHHHHHHHHHhCCC--------cEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC-----
Confidence 2 1 345667777766532 35567777 8889999999999999999999999999999999
Q ss_pred CceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC
Q psy775 866 PGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP 945 (1460)
Q Consensus 866 ~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP 945 (1460)
+.|+|+|..+|..+.+. +...+. +. .....+++++|
T Consensus 390 G~PvI~s~~gg~~e~v~------~~~~~~------------------~~--------------------~~~~~G~l~~~ 425 (485)
T 2qzs_A 390 GTLPLVRRTGGLADTVS------DCSLEN------------------LA--------------------DGVASGFVFED 425 (485)
T ss_dssp TCEEEEESSHHHHHHCC------BCCHHH------------------HH--------------------TTCCCBEEECS
T ss_pred CCCEEECCCCCccceec------cCcccc------------------cc--------------------ccccceEEECC
Confidence 78999999888766211 000000 00 00024689999
Q ss_pred CCHHHHHHHHHHHh---CCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhc
Q psy775 946 YEIDAAAEVIHRAL---TMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 946 ~d~~~iA~ai~~aL---~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
.|++++|++|.+++ +.+...++.+.+. + ...+++...++++++-+.+...+
T Consensus 426 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~-~--~~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 426 SNAWSLLRAIRRAFVLWSRPSLWRFVQRQA-M--AMDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp SSHHHHHHHHHHHHHHHTSHHHHHHHHHHH-H--HCCCCHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH-H--hhcCCHHHHHHHHHHHHHHhhhh
Confidence 99999999999999 4444333333333 2 26789999999998888776643
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=204.25 Aligned_cols=328 Identities=12% Similarity=0.103 Sum_probs=188.6
Q ss_pred cccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCC
Q psy775 160 NGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLK 239 (1460)
Q Consensus 160 n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~ 239 (1460)
+.-||..|+- +...... +|..+..+.-.-+. +++.+..+. ....|++-+||+|-.++|.+||++.+ +
T Consensus 139 ~~~lw~~~~i--~s~~~yg-~~dd~~~F~y~~~a-vl~~l~~~~-----~~~pdIiH~HDW~tg~~~~~Lk~~~~----~ 205 (725)
T 3nb0_A 139 KGDLWSLVGI--PSPENDF-ETNDAILLGYTVAW-FLGEVAHLD-----SQHAIVAHFHEWLAGVALPLCRKRRI----D 205 (725)
T ss_dssp HHHHHHHHCC--CCCSSCH-HHHHHHHHHHHHHH-HHHHHHHHC-----CSEEEEEEEESGGGCTHHHHHHHTTC----S
T ss_pred HHHHHHHhCc--CCCCccc-chhHHHHHHHHHHH-HHHHHHhcC-----CCCCcEEEeCchhhhHHHHHHHHhCC----C
Confidence 4557887763 3332222 23344444333333 333332221 01369999999999999999997644 8
Q ss_pred ceEEEEEecC----C----CCccccccCCC---------------cHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc
Q psy775 240 FKLGFFLHIP----F----PPWDIFRLFPW---------------SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC 296 (1460)
Q Consensus 240 ~~IgfFlHiP----F----Ps~eifr~LP~---------------r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~ 296 (1460)
++..|..|-= + =..+.+..+.. ....-.++..||.|-.-++.|++.-.. +++.
T Consensus 206 i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~----Ll~r 281 (725)
T 3nb0_A 206 VVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEH----LLKR 281 (725)
T ss_dssp CEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH----HTSS
T ss_pred CCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH----HhcC
Confidence 9999999952 0 00111111110 001122333455555555555443222 2211
Q ss_pred eecCCCcEEEECCeEEEEEEeecccCchhhhhhhc------cch-hh---h--------c--cCCeEEEE-ecCcc-ccC
Q psy775 297 RVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQ------AAP-RV---I--------D--TKQKIVLG-VDRLD-YTK 354 (1460)
Q Consensus 297 ~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~------~~~-~~---~--------~--~~~kvIL~-VgRLd-~~K 354 (1460)
+...+ +|+|||++.|.+... ..+ ++ . . .+++++++ +||++ ..|
T Consensus 282 -------------~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nK 346 (725)
T 3nb0_A 282 -------------KPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNK 346 (725)
T ss_dssp -------------CCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTT
T ss_pred -------------CCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccC
Confidence 11123 999999988765311 111 11 1 0 24566666 79999 689
Q ss_pred CHHHHHHHHHHHHHhC--CCCCCcEEEEEEEcCCCCChHH-----HHHHHHHHHHHHHH---------------------
Q psy775 355 GLVHRLKAFETLLEKH--PEHLEKVTLLQIAVPSRTDVKE-----YQDLKEEMDQLVGR--------------------- 406 (1460)
Q Consensus 355 GI~~lL~Af~~lL~~~--P~~~~kvvLvqig~psr~~~~e-----y~~L~~ev~~lv~~--------------------- 406 (1460)
|++.+++|+.++...- -+. .+-|+..+..|.+..... .+...+++...+..
T Consensus 347 GiDl~ieAl~~L~~~l~~~~~-~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (725)
T 3nb0_A 347 GADMFIEALARLNYRLKVSGS-KKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGL 425 (725)
T ss_dssp THHHHHHHHHHHHHHHHHTTC-CCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTC
T ss_pred CHHHHHHHHHHHHHHHhhccC-CCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhccccccc
Confidence 9999999999987541 111 233444455565432211 12121222222111
Q ss_pred --------------------------------------------------------HhcccCCCCcccEEEEcCCCCHH-
Q psy775 407 --------------------------------------------------------INGRFTTPNWSPIRYIYGCISQD- 429 (1460)
Q Consensus 407 --------------------------------------------------------IN~~fg~~~~~pIv~~~g~v~~e- 429 (1460)
++-.=...+-..|+++.+.++..
T Consensus 426 ~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d 505 (725)
T 3nb0_A 426 TTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANN 505 (725)
T ss_dssp CSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTC
T ss_pred CCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCC
Confidence 11000011223567777888876
Q ss_pred -----HHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc----------ccEEEC---CCC
Q psy775 430 -----ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH----------EALICN---PYE 491 (1460)
Q Consensus 430 -----eL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~----------~allVN---P~D 491 (1460)
++..+|+.||+||+||.+||||++++||||| |.|+|+|..+|+.+.+. .|++|. |.|
T Consensus 506 ~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~-----G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d 580 (725)
T 3nb0_A 506 PILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM-----GVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKA 580 (725)
T ss_dssp SSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT-----TCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSC
T ss_pred ccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc-----CCCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCC
Confidence 5899999999999999999999999999999 77889999999877652 378884 567
Q ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhcC
Q psy775 492 IDAAAEVIHRAL----TMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 492 ~~elA~AI~~aL----~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+++++++|.++| .+++.+|+...++.++...+++
T Consensus 581 ~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FS 618 (725)
T 3nb0_A 581 PDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLD 618 (725)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGB
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 777777776665 4566655444444445555666
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=183.21 Aligned_cols=276 Identities=14% Similarity=0.087 Sum_probs=194.7
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHH-hhcccCceeecccHhHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEIL-QGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL-~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
|+|++|.+........+.+ . ...++.+.+|-.++....... ....+ ..+-.+|.|-+.+....+.+.+.
T Consensus 109 Dii~~~~~~~~~~~~~~~~---~--~~~~~i~~~h~~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 178 (406)
T 2gek_A 109 DVLHIHEPNAPSLSMLALQ---A--AEGPIVATFHTSTTKSLTLSV---FQGILRPYHEKIIGRIAVSDLARRWQMEA-- 178 (406)
T ss_dssp SEEEEECCCSSSHHHHHHH---H--EESSEEEEECCCCCSHHHHHH---HHSTTHHHHTTCSEEEESSHHHHHHHHHH--
T ss_pred CEEEECCccchHHHHHHHH---h--cCCCEEEEEcCcchhhhhHHH---HHHHHHHHHhhCCEEEECCHHHHHHHHHh--
Confidence 7999999887665333321 1 246788889987655322111 11111 34567899888887666665541
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
++ .. ++ ++|+|+|.+.|...... .
T Consensus 179 --~~-------------~~--~~-vi~~~v~~~~~~~~~~~----~---------------------------------- 202 (406)
T 2gek_A 179 --LG-------------SD--AV-EIPNGVDVASFADAPLL----D---------------------------------- 202 (406)
T ss_dssp --HS-------------SC--EE-ECCCCBCHHHHHTCCCC----T----------------------------------
T ss_pred --cC-------------CC--cE-EecCCCChhhcCCCchh----h----------------------------------
Confidence 11 11 46 89999998877532100 0
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCc-cccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRL-d~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
.+..++++|+++||+ .+.||+...++|+.++.+++|++ .|+.+|.+ +. +++++++.
T Consensus 203 ---------~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~~-----~~-----~~l~~~~~ 259 (406)
T 2gek_A 203 ---------GYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDV----EILIVGRG-----DE-----DELREQAG 259 (406)
T ss_dssp ---------TCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTC----EEEEESCS-----CH-----HHHHHHTG
T ss_pred ---------hccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCe----EEEEEcCC-----cH-----HHHHHHHH
Confidence 001356789999999 99999999999999999988875 45555543 22 23333333
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhh
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEA 884 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~ 884 (1460)
+.. +.+.+.|.++++|+..+|+.||++|.||. .|||+++++|||+| +.|+|+|..+|..+.+.
T Consensus 260 ~~~---------~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~-- 323 (406)
T 2gek_A 260 DLA---------GHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAA-----GTAVVASDLDAFRRVLA-- 323 (406)
T ss_dssp GGG---------GGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHH-----TCEEEECCCHHHHHHHT--
T ss_pred hcc---------CcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHc-----CCCEEEecCCcHHHHhc--
Confidence 321 22677899999999999999999999997 99999999999999 78999999877665211
Q ss_pred hhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 885 LICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 885 l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
....+++++|.|+++++++|.++++.+..
T Consensus 324 ---------------------------------------------------~~~~g~~~~~~d~~~l~~~i~~l~~~~~~ 352 (406)
T 2gek_A 324 ---------------------------------------------------DGDAGRLVPVDDADGMAAALIGILEDDQL 352 (406)
T ss_dssp ---------------------------------------------------TTTSSEECCTTCHHHHHHHHHHHHHCHHH
T ss_pred ---------------------------------------------------CCCceEEeCCCCHHHHHHHHHHHHcCHHH
Confidence 01346899999999999999999986554
Q ss_pred HHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhcc
Q psy775 965 ERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITED 1000 (1460)
Q Consensus 965 er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 1000 (1460)
.++. .+..++++..+++...++.+++-+++...+.
T Consensus 353 ~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 353 RAGY-VARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp HHHH-HHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred HHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 4443 3445677778999999999999888876543
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=185.19 Aligned_cols=286 Identities=14% Similarity=0.161 Sum_probs=186.3
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHH-hhcccCceeecccHhHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEIL-QGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL-~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
|+|.+|...-...+..+...+ .+...++.+.+|-..+ ......+....+. ..+-.+|.|-..+....+.+.+.
T Consensus 101 Dvv~~~~~~~~~~~~~~~~~~--~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-- 174 (394)
T 2jjm_A 101 DILHVHYAIPHAICAYLAKQM--IGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHEL-- 174 (394)
T ss_dssp SEEEECSSTTHHHHHHHHHHH--TTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHHH--
T ss_pred CEEEEcchhHHHHHHHHHHHh--hcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--
Confidence 689999765332233333211 1235678888886311 0011111122222 23446888888887666555432
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.+ ...++.++|+|+|.+.|.+. . . ..+|+.++++
T Consensus 175 --~~--------------~~~~~~vi~ngv~~~~~~~~----~--~--------------------~~~~~~~~~~---- 208 (394)
T 2jjm_A 175 --VK--------------PNKDIQTVYNFIDERVYFKR----D--M--------------------TQLKKEYGIS---- 208 (394)
T ss_dssp --TC--------------CSSCEEECCCCCCTTTCCCC----C--C--------------------HHHHHHTTCC----
T ss_pred --hC--------------CcccEEEecCCccHHhcCCc----c--h--------------------HHHHHHcCCC----
Confidence 11 11247789999998766431 0 0 2344444432
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
.++++|+++||+.+.||+...++|++++.++ ++ +.|+.+|.+ +.. +++++++.+
T Consensus 209 ------------~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~----~~l~i~G~g-----~~~----~~l~~~~~~ 262 (394)
T 2jjm_A 209 ------------ESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VD----AKLLLVGDG-----PEF----CTILQLVKN 262 (394)
T ss_dssp ---------------CEEEEECCCCGGGTHHHHHHHHHHHHHS-SC----CEEEEECCC-----TTH----HHHHHHHHT
T ss_pred ------------CCCeEEEEeeccccccCHHHHHHHHHHHHhh-CC----CEEEEECCc-----hHH----HHHHHHHHH
Confidence 4567899999999999999999999998776 43 356656532 222 345555544
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 886 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~ 886 (1460)
.+. .+.+.+.|. .+++..+|+.||++|+||..|||+++++|||+| +.|+|+|..+|..+.+.
T Consensus 263 ~~l-------~~~v~~~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-----G~PvI~~~~~~~~e~v~---- 324 (394)
T 2jjm_A 263 LHI-------EDRVLFLGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMAC-----GVPCIGTRVGGIPEVIQ---- 324 (394)
T ss_dssp TTC-------GGGBCCCBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHT-----TCCEEEECCTTSTTTCC----
T ss_pred cCC-------CCeEEEeCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhc-----CCCEEEecCCChHHHhh----
Confidence 432 122445554 578999999999999999999999999999999 78999999888776110
Q ss_pred cCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH
Q psy775 887 CNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER 966 (1460)
Q Consensus 887 vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er 966 (1460)
....+++++|.|++++|++|.++++.+...+
T Consensus 325 -------------------------------------------------~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~ 355 (394)
T 2jjm_A 325 -------------------------------------------------HGDTGYLCEVGDTTGVADQAIQLLKDEELHR 355 (394)
T ss_dssp -------------------------------------------------BTTTEEEECTTCHHHHHHHHHHHHHCHHHHH
T ss_pred -------------------------------------------------cCCceEEeCCCCHHHHHHHHHHHHcCHHHHH
Confidence 1135689999999999999999998654444
Q ss_pred HHHHHHHHhHH-HhcCHHHHHHHHHHHHhhhhhc
Q psy775 967 TLRMNYLRKRE-KVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 967 ~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+.+ +..++++ ..++++.+++++++-+++...+
T Consensus 356 ~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 356 NMG-ERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHH-HHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred HHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 444 4446666 8899999999999998887654
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.3e-16 Score=166.19 Aligned_cols=160 Identities=18% Similarity=0.224 Sum_probs=125.0
Q ss_pred CCEEEEEEcCcc-ccCCHHHHHHHHHHHH--HhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 740 KQKIVLGVDRLD-YTKGLVHRLKAFETLL--EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 740 ~kkiIl~VdRLd-~~KGi~~kL~Afe~fL--~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
++++|+++||+. +.||+...++|+.++. +++|+ +.|+.+|.+. + ++.+++++++.+.+
T Consensus 35 ~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~----~~l~i~G~~~----~---~~~~~l~~~~~~~~-------- 95 (200)
T 2bfw_A 35 EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----P---ELEGWARSLEEKHG-------- 95 (200)
T ss_dssp SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCBC----H---HHHHHHHHHHHHCT--------
T ss_pred CCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC----eEEEEECCCC----h---HHHHHHHHHHHhcC--------
Confidence 456899999999 9999999999999987 77776 4566666432 1 23455666666554
Q ss_pred ccEEEE-cCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhh
Q psy775 817 SPIRYI-YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAA 895 (1460)
Q Consensus 817 ~pvv~~-~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~ 895 (1460)
. +.+ .|.++++++..+|+.||+++.||..|||+++++|||+| +.|+|+|..+|..+.+
T Consensus 96 -~-v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~~-------------- 154 (200)
T 2bfw_A 96 -N-VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAIPIASAVGGLRDII-------------- 154 (200)
T ss_dssp -T-EEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-----TCEEEEESCHHHHHHC--------------
T ss_pred -C-EEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC-----CCCEEEeCCCChHHHc--------------
Confidence 1 556 89999999999999999999999999999999999999 7899999988766510
Q ss_pred hhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 896 AEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 896 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
. | ..+++++|.|+++++++|.++++|.+++++...+..++
T Consensus 155 --------------------------------~---~-----~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~ 194 (200)
T 2bfw_A 155 --------------------------------T---N-----ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKK 194 (200)
T ss_dssp --------------------------------C---T-----TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred --------------------------------C---C-----CceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 0 1 34689999999999999999999666655554444455
Q ss_pred HHHh
Q psy775 976 REKV 979 (1460)
Q Consensus 976 ~v~~ 979 (1460)
++.+
T Consensus 195 ~~~~ 198 (200)
T 2bfw_A 195 RAMS 198 (200)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-16 Score=182.23 Aligned_cols=209 Identities=14% Similarity=0.200 Sum_probs=150.6
Q ss_pred cCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch--hhhc-----cCCeE
Q psy775 271 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP--RVID-----TKQKI 343 (1460)
Q Consensus 271 ~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~--~~~~-----~~~kv 343 (1460)
.+|.|-+.+....+.+.+. +|. ...++.++|+|+|.+.|.+...... ..++ .++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~-------------~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQT-------------EPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNL 198 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCC-------------CGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEE
T ss_pred CCcEEEEcCHHHHHHHHHH----hCC-------------ChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeE
Confidence 5888888888777766542 121 1235678999999998876432211 1111 46789
Q ss_pred EEEecCccccCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEE
Q psy775 344 VLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYI 422 (1460)
Q Consensus 344 IL~VgRLd~~KGI~~lL~Af~~lL~~-~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~ 422 (1460)
++++||+.+.||+..+++|+.++.++ +|+ +.|+.+|.+. . ++++ +++.+.+.. ..|.+
T Consensus 199 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~---~---~~~~----~~~~~~~~~------~~v~~- 257 (374)
T 2iw1_A 199 LLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK---P---RKFE----ALAEKLGVR------SNVHF- 257 (374)
T ss_dssp EEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC---C---HHHH----HHHHHHTCG------GGEEE-
T ss_pred EEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC---H---HHHH----HHHHHcCCC------CcEEE-
Confidence 99999999999999999999988766 454 4566666432 1 2233 333333321 12444
Q ss_pred cCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEEC-CCCHHHHHHH
Q psy775 423 YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICN-PYEIDAAAEV 498 (1460)
Q Consensus 423 ~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVN-P~D~~elA~A 498 (1460)
.|. .+++..+|+.||++|+||.+||||++++||||| |.|+|+|..+|..+.+. .|++++ |.|+++++++
T Consensus 258 ~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~ 330 (374)
T 2iw1_A 258 FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA-----GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 330 (374)
T ss_dssp ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-----TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHH
T ss_pred CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC-----CCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHH
Confidence 465 578999999999999999999999999999999 67789999999888774 389997 9999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 499 IHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 499 I~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|.+++++++..++. .+..++.+.+++
T Consensus 331 i~~l~~~~~~~~~~-~~~~~~~~~~~~ 356 (374)
T 2iw1_A 331 LRKALTQSPLRMAW-AENARHYADTQD 356 (374)
T ss_dssp HHHHHHCHHHHHHH-HHHHHHHHHHSC
T ss_pred HHHHHcChHHHHHH-HHHHHHHHHHhh
Confidence 99999865544444 344455566555
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-16 Score=200.93 Aligned_cols=188 Identities=15% Similarity=0.147 Sum_probs=146.9
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCC--CCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS--RTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~ps--r~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.++++|+++||+++.||+..+++||.++.+++|+ +.|+.+|.+. .....+..+..+++.+++.+.+..
T Consensus 570 ~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~----v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~------ 639 (816)
T 3s28_A 570 KKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL----ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLN------ 639 (816)
T ss_dssp TTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHH----CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCB------
T ss_pred CCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCC----eEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCC------
Confidence 5678999999999999999999999999887776 4677777665 222344455677788888776533
Q ss_pred ccEEEEcC----CCCHHHHHHHHH-HccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCccc
Q psy775 817 SPIRYIYG----CISQDELASFYR-DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE 891 (1460)
Q Consensus 817 ~pvv~~~g----~v~~eel~Aly~-~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~ 891 (1460)
..+.|.| .++.+|++.+|+ +||++|+||..||||++++||||| |.|+|+|..+|..+.+.
T Consensus 640 -~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~-----G~PVIasd~GG~~EiV~--------- 704 (816)
T 3s28_A 640 -GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCKGGPAEIIV--------- 704 (816)
T ss_dssp -BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT-----TCCEEEESSBTHHHHCC---------
T ss_pred -CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc-----CCCEEEeCCCChHHHHc---------
Confidence 2366666 455699999998 689999999999999999999999 78999999999777211
Q ss_pred chhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh----CCCHHHHH
Q psy775 892 IDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL----TMPEDERT 967 (1460)
Q Consensus 892 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL----~m~~~er~ 967 (1460)
++ ..+++++|.|++++|++|.+++ ..+...++
T Consensus 705 ------------------------------------dg--------~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~ 740 (816)
T 3s28_A 705 ------------------------------------HG--------KSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDE 740 (816)
T ss_dssp ------------------------------------BT--------TTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred ------------------------------------cC--------CcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHH
Confidence 11 3469999999999999998877 66665555
Q ss_pred HHHHHHHhHH-HhcCHHHHHHHHHHHHhhh
Q psy775 968 LRMNYLRKRE-KVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 968 ~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 996 (1460)
.+.++ ++++ ..+++..+++++++-+...
T Consensus 741 m~~~a-r~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 741 ISKGG-LQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHH-HHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHhCCHHHHHHHHHHHHHHH
Confidence 55555 5555 8899999999988876654
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.9e-16 Score=159.68 Aligned_cols=155 Identities=12% Similarity=0.119 Sum_probs=114.8
Q ss_pred CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
+.+|+++||+.+.||+..+++|+.++ +++|+ +.|+.+|.+ +....++ +++.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~g-----~~~~~~~----~~~~~~~~---------~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGKG-----PDEKKIK----LLAQKLGV---------KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECCS-----TTHHHHH----HHHHHHTC---------EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeCC-----ccHHHHH----HHHHHcCC---------eE
Confidence 46799999999999999999999986 44454 556666632 2233333 33333332 24
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC-eEEEcC-CCCchhcccc-cEEECCCCHHHHHH
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG-VLIVSP-FAGAGEQMHE-ALICNPYEIDAAAE 497 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G-vlVlSe-~aGaa~~L~~-allVNP~D~~elA~ 497 (1460)
.+ |.++.+++..+|+.||++++||..||||++++||||| |. |+|++. .+|..+.+.+ +.+++|.|++++++
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 132 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-----GIVPVIANSPLSATRQFALDERSLFEPNNAKDLSA 132 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-----TCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHH
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-----CCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHH
Confidence 55 9999999999999999999999999999999999999 55 667745 4444444443 66999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 498 VIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 498 AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+|.++++.+...++.+.+ .++.+.+++
T Consensus 133 ~i~~l~~~~~~~~~~~~~-~~~~~~~~s 159 (166)
T 3qhp_A 133 KIDWWLENKLERERMQNE-YAKSALNYT 159 (166)
T ss_dssp HHHHHHHCHHHHHHHHHH-HHHHHHHHC
T ss_pred HHHHHHhCHHHHHHHHHH-HHHHHHHCC
Confidence 999999965554444443 444556666
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.8e-16 Score=177.90 Aligned_cols=242 Identities=12% Similarity=-0.000 Sum_probs=171.5
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 647 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~r 647 (1460)
|+|++|.++..... ......+ .+.+|-.++.+.. +|.|-+.+....+.+.+
T Consensus 86 Dvi~~~~~~~~~~~--------~~~~~~p-v~~~h~~~~~~~~----------------~d~ii~~S~~~~~~~~~---- 136 (342)
T 2iuy_A 86 DVVHDHSGGVIGPA--------GLPPGTA-FISSHHFTTRPVN----------------PVGCTYSSRAQRAHCGG---- 136 (342)
T ss_dssp SEEEECSSSSSCST--------TCCTTCE-EEEEECSSSBCSC----------------CTTEEESCHHHHHHTTC----
T ss_pred CEEEECCchhhHHH--------HhhcCCC-EEEecCCCCCccc----------------ceEEEEcCHHHHHHHhc----
Confidence 79999988755432 1234567 7888877543321 88887777655444322
Q ss_pred HhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHH
Q psy775 648 RLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFV 727 (1460)
Q Consensus 648 lLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~ 727 (1460)
..++.++|+|||.+.|.+... .
T Consensus 137 ------------------~~~~~vi~ngvd~~~~~~~~~-----~----------------------------------- 158 (342)
T 2iuy_A 137 ------------------GDDAPVIPIPVDPARYRSAAD-----Q----------------------------------- 158 (342)
T ss_dssp ------------------CTTSCBCCCCBCGGGSCCSTT-----C-----------------------------------
T ss_pred ------------------CCceEEEcCCCChhhcCcccc-----c-----------------------------------
Confidence 123567899999876642110 0
Q ss_pred HHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q psy775 728 QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 807 (1460)
Q Consensus 728 ~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I 807 (1460)
..++++|+++||+.+.||+...++|++++ + +.|+.+|.+. .++++++++.++
T Consensus 159 ----------~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~----~~l~i~G~g~---------~~~~l~~~~~~~ 210 (342)
T 2iuy_A 159 ----------VAKEDFLLFMGRVSPHKGALEAAAFAHAC-----G----RRLVLAGPAW---------EPEYFDEITRRY 210 (342)
T ss_dssp ----------CCCCSCEEEESCCCGGGTHHHHHHHHHHH-----T----CCEEEESCCC---------CHHHHHHHHHHH
T ss_pred ----------CCCCCEEEEEeccccccCHHHHHHHHHhc-----C----cEEEEEeCcc---------cHHHHHHHHHHh
Confidence 12345799999999999999999999886 2 3456555432 123455555555
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCC----------ccCCCccceeeeeeccCCCCceEEEcCCCCc
Q psy775 808 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL----------RDGMNLVAKEFVACQINEPPGVLIVSPFAGA 877 (1460)
Q Consensus 808 N~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl----------rEGmnLva~EymAc~~~~~~g~lIlSe~aG~ 877 (1460)
+.. +.+.|.++++|+..+|+.||++|+||. .|||+++++|||+| +.|+|+|..+|.
T Consensus 211 ~~~---------v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~-----G~PvI~s~~~~~ 276 (342)
T 2iuy_A 211 GST---------VEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS-----GTPVVGTGNGCL 276 (342)
T ss_dssp TTT---------EEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT-----TCCEEECCTTTH
T ss_pred CCC---------EEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhc-----CCCEEEcCCCCh
Confidence 422 677999999999999999999999999 89999999999999 789999999887
Q ss_pred chhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHH
Q psy775 878 GEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957 (1460)
Q Consensus 878 ~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~ 957 (1460)
.+.+. + .- -..+++++| |++++|++|.+
T Consensus 277 ~e~~~---------------------------------------------~-~~-----~~~g~~~~~-d~~~l~~~i~~ 304 (342)
T 2iuy_A 277 AEIVP---------------------------------------------S-VG-----EVVGYGTDF-APDEARRTLAG 304 (342)
T ss_dssp HHHGG---------------------------------------------G-GE-----EECCSSSCC-CHHHHHHHHHT
T ss_pred HHHhc---------------------------------------------c-cC-----CCceEEcCC-CHHHHHHHHHH
Confidence 66211 0 00 024588999 99999999999
Q ss_pred HhCCCHHHHHHHHHHHHhHH-HhcCHHHHHHHHHHHHhhhhhc
Q psy775 958 ALTMPEDERTLRMNYLRKRE-KVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 958 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+++ + +..++++ ..+++...++++++-+++...+
T Consensus 305 l~~--------~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 305 LPA--------S-DEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp SCC--------H-HHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred HHH--------H-HHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 887 1 1223333 6779999999998888877654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.1e-16 Score=186.69 Aligned_cols=163 Identities=9% Similarity=0.025 Sum_probs=122.2
Q ss_pred EEEEeecccCchhhhhhhccchhhhccCCeEEEEecCc-cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRL-d~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ 391 (1460)
++.++|+|+|.+.|.... ....+++.++++||+ .+.||+..+|+||+++.+++|+. .++.|+.+|.+...
T Consensus 218 ~~~~i~~g~d~~~~~~~~-----~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG~~~~~--- 288 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIN-----DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVGEKHKD--- 288 (413)
T ss_dssp EEEEECCCCCHHHHTTTT-----SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEESCCCC---
T ss_pred ceEEeCCCcCchhhcccc-----cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEcCCchh---
Confidence 467889999988764320 011345678999996 68999999999999999988862 12457777743211
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
.+.+ ...-+.|.|.++.+++..+|+.||+||+||.+||||++++||||| |.|+|+
T Consensus 289 -----------------~~l~---~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~-----G~PVV~ 343 (413)
T 2x0d_A 289 -----------------IALG---KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF-----GLRVIT 343 (413)
T ss_dssp -----------------EEEE---TTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT-----TCEEEE
T ss_pred -----------------hhcC---CcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC-----CCcEEE
Confidence 0111 112345679999999999999999999999999999999999999 666777
Q ss_pred cCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHH
Q psy775 472 SPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDER 510 (1460)
Q Consensus 472 Se~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er 510 (1460)
+ .+|..+.+. .|++|+|.|++++|++|.++++++...+
T Consensus 344 ~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~ 384 (413)
T 2x0d_A 344 N-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRD 384 (413)
T ss_dssp E-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC---
T ss_pred e-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHH
Confidence 4 457666653 3899999999999999999998665433
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-15 Score=174.31 Aligned_cols=235 Identities=14% Similarity=0.167 Sum_probs=169.3
Q ss_pred cCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccccc
Q psy775 626 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRL 705 (1460)
Q Consensus 626 ~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~ 705 (1460)
.+|.|-+.+....+.|.+. +|. ...++.++|+|+|.+.|.+....
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~-------------~~~~~~vi~ngv~~~~~~~~~~~------------------ 180 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQT-------------EPERFQILPPGIYPDRKYSEQIP------------------ 180 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCC-------------CGGGEEECCCCCCGGGSGGGSCT------------------
T ss_pred CCcEEEEcCHHHHHHHHHH----hCC-------------ChhheEEecCCcCHHhcCcccch------------------
Confidence 5888888888777766542 222 12246789999999887643211
Q ss_pred ccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHh-CCCCCCCEEEEEEEc
Q psy775 706 DYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAV 784 (1460)
Q Consensus 706 ~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~-~P~~~~kVvLvqi~~ 784 (1460)
...+.+|++++++ .++++++++||+.+.||+...++|++++.++ +|+ +.|+.+|.
T Consensus 181 ----~~~~~~~~~~~~~----------------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~ 236 (374)
T 2iw1_A 181 ----NSREIYRQKNGIK----------------EQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQ 236 (374)
T ss_dssp ----THHHHHHHHTTCC----------------TTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESS
T ss_pred ----hHHHHHHHHhCCC----------------CCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcC
Confidence 0113556665543 5678999999999999999999999998776 465 56776665
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCC
Q psy775 785 PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 864 (1460)
Q Consensus 785 psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~ 864 (1460)
+. . +++++++.+.+.. +.+.+.|. .+++..+|+.||++|.||..|||+++.+|||+|
T Consensus 237 g~---~-------~~~~~~~~~~~~~-------~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~---- 293 (374)
T 2iw1_A 237 DK---P-------RKFEALAEKLGVR-------SNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA---- 293 (374)
T ss_dssp SC---C-------HHHHHHHHHHTCG-------GGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH----
T ss_pred CC---H-------HHHHHHHHHcCCC-------CcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC----
Confidence 32 1 2344445444322 12555665 468999999999999999999999999999999
Q ss_pred CCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeC
Q psy775 865 PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN 944 (1460)
Q Consensus 865 ~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVn 944 (1460)
+.|+|+|..+|..+.+. + -..+++++
T Consensus 294 -G~Pvi~~~~~~~~e~i~--------------~---------------------------------------~~~g~~~~ 319 (374)
T 2iw1_A 294 -GLPVLTTAVCGYAHYIA--------------D---------------------------------------ANCGTVIA 319 (374)
T ss_dssp -TCCEEEETTSTTTHHHH--------------H---------------------------------------HTCEEEEC
T ss_pred -CCCEEEecCCCchhhhc--------------c---------------------------------------CCceEEeC
Confidence 78999999988776221 0 03468887
Q ss_pred -CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhh
Q psy775 945 -PYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLI 997 (1460)
Q Consensus 945 -P~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 997 (1460)
|.|+++++++|.++++.+.. ++...+..++++.++++..|.+.+.+-++...
T Consensus 320 ~~~~~~~l~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 320 EPFSQEQLNEVLRKALTQSPL-RMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp SSCCHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred CCCCHHHHHHHHHHHHcChHH-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 99999999999999986544 44444555788888888899998888776543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=180.75 Aligned_cols=130 Identities=10% Similarity=0.095 Sum_probs=94.9
Q ss_pred cEEEEcCCCCHH------HHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCccc
Q psy775 818 PIRYIYGCISQD------ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE 891 (1460)
Q Consensus 818 pvv~~~g~v~~e------el~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~ 891 (1460)
.|+++.+.++.. ++..+|+.||++|+||.+||||++++||||| +.|+|+|..+|+.+.+.
T Consensus 493 KVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~-----G~PvI~s~~gG~~d~V~--------- 558 (725)
T 3nb0_A 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM-----GVPSITTNVSGFGSYME--------- 558 (725)
T ss_dssp EEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT-----TCCEEEETTBHHHHHHH---------
T ss_pred eEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc-----CCCEEEeCCCChhhhhh---------
Confidence 467777788876 5899999999999999999999999999999 78999999999887221
Q ss_pred chhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEe---CCCCHHHHHHHHHHHhC----CCHH
Q psy775 892 IDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALIC---NPYEIDAAAEVIHRALT----MPED 964 (1460)
Q Consensus 892 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allV---nP~d~~~iA~ai~~aL~----m~~~ 964 (1460)
+..+.......+++| +|.|+++++++|.++|. +++.
T Consensus 559 -------------------------------------dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~ 601 (725)
T 3nb0_A 559 -------------------------------------DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRR 601 (725)
T ss_dssp -------------------------------------TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHH
T ss_pred -------------------------------------ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHH
Confidence 000000000134666 46678877777777764 5666
Q ss_pred HHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 965 ERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 965 er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
+|....++.++....+++..-++..++.+..+..
T Consensus 602 ~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 602 QRINQRNATEALSDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp HHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 6555444456667788999999988888877664
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.8e-15 Score=151.73 Aligned_cols=162 Identities=13% Similarity=0.137 Sum_probs=116.7
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+.+|+++||+.+.||+...++|+.++ +++|+ +.|+.+|.+ +. .+++++++.+.+.. +
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~g-----~~----~~~~~~~~~~~~~~---------v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGKG-----PD----EKKIKLLAQKLGVK---------A 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECCS-----TT----HHHHHHHHHHHTCE---------E
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeCC-----cc----HHHHHHHHHHcCCe---------E
Confidence 46799999999999999999999986 55565 567766643 22 24455555555432 5
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCc-eEEEcC-CCCcchhhhhhhhcCcccchhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG-VLIVSP-FAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g-~lIlSe-~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+ |.++.+++..+|+.||+++.||..||||++++|||+| +. |+|++. .+|..+
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~vPvi~~~~~~~~~~------------------- 113 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-----GIVPVIANSPLSATRQ------------------- 113 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-----TCCEEEECCTTCGGGG-------------------
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-----CCCcEEeeCCCCchhh-------------------
Confidence 56 9999999999999999999999999999999999999 66 888844 444333
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+.. +++.+++|.|+++++++|.++++.+...++.+ +..++++.
T Consensus 114 -------------------------------~~~-----~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~-~~~~~~~~ 156 (166)
T 3qhp_A 114 -------------------------------FAL-----DERSLFEPNNAKDLSAKIDWWLENKLERERMQ-NEYAKSAL 156 (166)
T ss_dssp -------------------------------GCS-----SGGGEECTTCHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHH
T ss_pred -------------------------------hcc-----CCceEEcCCCHHHHHHHHHHHHhCHHHHHHHH-HHHHHHHH
Confidence 111 22348899999999999999998554444444 44466777
Q ss_pred hcCHHHHHH
Q psy775 979 VHDVNYWMR 987 (1460)
Q Consensus 979 ~~~~~~W~~ 987 (1460)
++++..+++
T Consensus 157 ~~s~~~~~~ 165 (166)
T 3qhp_A 157 NYTLENSVI 165 (166)
T ss_dssp HHC------
T ss_pred HCChhhhhc
Confidence 777766554
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.55 E-value=5.2e-15 Score=155.71 Aligned_cols=142 Identities=16% Similarity=0.236 Sum_probs=110.3
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCccc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~p 418 (1460)
.++++|+++||+.+.||+..+++|+.++ |++ .|+.+|..... .++++.+.+. +.+.. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~~~-----~~l~~~~~~~--~~~l~------~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSKG-----DHAERYARKI--MKIAP------DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCTT-----STHHHHHHHH--HHHSC------TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCccH-----HHHHHHHHhh--hcccC------Cc
Confidence 5678899999999999999999999886 554 35556643221 1233333311 11111 12
Q ss_pred EEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHH
Q psy775 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAA 495 (1460)
Q Consensus 419 Iv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~el 495 (1460)
| .+.|.++++++..+|+.||++++||..||||++++||||| |.|+|+|..+|..+.+. .|+++ |.|++++
T Consensus 80 v-~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~-----G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l 152 (177)
T 2f9f_A 80 V-KFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-----GKPVIAVNEGGFKETVINEKTGYLV-NADVNEI 152 (177)
T ss_dssp E-EEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-----TCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHH
T ss_pred E-EEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc-----CCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHH
Confidence 3 4469999999999999999999999999999999999999 67789999887777774 38889 9999999
Q ss_pred HHHHHHHcCCCHH
Q psy775 496 AEVIHRALTMPED 508 (1460)
Q Consensus 496 A~AI~~aL~m~~~ 508 (1460)
+++|.++++++..
T Consensus 153 ~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 153 IDAMKKVSKNPDK 165 (177)
T ss_dssp HHHHHHHHHCTTT
T ss_pred HHHHHHHHhCHHH
Confidence 9999999988764
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=173.22 Aligned_cols=149 Identities=10% Similarity=0.081 Sum_probs=113.9
Q ss_pred EEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKE 392 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~e 392 (1460)
++.++|+|+|.+.|.+.... ...++++++++||+.+.||+ ++.+.+++|++ .|+++|.+.
T Consensus 198 ~i~vipngvd~~~f~~~~~~----~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~----~l~ivG~g~------ 257 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS----PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQV----TFHVIGSGM------ 257 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC----SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTE----EEEEESCSS------
T ss_pred CEEEEcCCcChHhcCccccc----ccCCCcEEEEEeccccccCH------HHHHHHhCCCe----EEEEEeCch------
Confidence 78899999999988654221 11234789999999999999 55566677764 466666321
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeee-------eeccCCC
Q psy775 393 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFV-------ACQINEP 465 (1460)
Q Consensus 393 y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEam-------Acq~~~~ 465 (1460)
+.+ .+..+-+.|.|.++++++.++|+.||++|+||..||||++++||| ||
T Consensus 258 -----------~~~-------~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~----- 314 (406)
T 2hy7_A 258 -----------GRH-------PGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFF----- 314 (406)
T ss_dssp -----------CCC-------TTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHH-----
T ss_pred -----------HHh-------cCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhC-----
Confidence 111 122222455699999999999999999999999999999999999 99
Q ss_pred CCeEEEcCCCCchhcccccEE-ECCCCHHHHHHHHHHHcCCCH
Q psy775 466 PGVLIVSPFAGAGEQMHEALI-CNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 466 ~GvlVlSe~aGaa~~L~~all-VNP~D~~elA~AI~~aL~m~~ 507 (1460)
|.|+|+|.. .. .-..|++ |+|.|++++|++|.++++++.
T Consensus 315 G~PVIas~~--v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 315 GLPAVCPNA--VV-GPYKSRFGYTPGNADSVIAAITQALEAPR 354 (406)
T ss_dssp TCCEEEEGG--GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC
T ss_pred CCcEEEehh--cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 677798886 11 1123888 999999999999999998775
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.52 E-value=9.1e-14 Score=160.98 Aligned_cols=240 Identities=12% Similarity=0.136 Sum_probs=152.6
Q ss_pred CCCEEEEeCcchhHHH-HHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhc--cCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAA-NTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML--GCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL--~aDlIgF~t~~yar~FL 287 (1460)
..|+|.+|......++ .++.+.. +.++.+..| .+.+...+. ++...+.+.++ .+|.+-..+....+.+.
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~-----~ip~v~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 166 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYN-----QIPVGHVEA-GLRTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQ 166 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHT-----TCCEEEESC-CCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHH-----CCCEEEEec-ccccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHH
Confidence 3699999975333333 3333221 456665544 332222222 23344444433 28888888876666554
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecc-cCchhhhhhhccchhhhc---cCCeEEEEecCcccc-CCHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIA-IPYERFVQLAQAAPRVID---TKQKIVLGVDRLDYT-KGLVHRLKA 362 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiG-ID~~~f~~~~~~~~~~~~---~~~kvIL~VgRLd~~-KGI~~lL~A 362 (1460)
+ .|.. ..++.++|+| +|...+.+........++ .++.+++++||+.+. ||+..+++|
T Consensus 167 ~-----~g~~-------------~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a 228 (375)
T 3beo_A 167 K-----ENKD-------------ESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRA 228 (375)
T ss_dssp H-----TTCC-------------GGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHH
T ss_pred H-----cCCC-------------cccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHHHH
Confidence 3 1211 1246688999 887766432111112211 234467799999986 999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEE
Q psy775 363 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 442 (1460)
Q Consensus 363 f~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~V 442 (1460)
+.++.+++|+++ ++. +.. .+ + +++++++++.+. . ..| .|.|.++..++..+|+.||++|
T Consensus 229 ~~~l~~~~~~~~----~i~-~~g--~~-~---~~~~~~~~~~~~-------~--~~v-~~~g~~~~~~~~~~~~~ad~~v 287 (375)
T 3beo_A 229 IKRLVDKHEDVQ----VVY-PVH--MN-P---VVRETANDILGD-------Y--GRI-HLIEPLDVIDFHNVAARSYLML 287 (375)
T ss_dssp HHHHHHHCTTEE----EEE-ECC--SC-H---HHHHHHHHHHTT-------C--TTE-EEECCCCHHHHHHHHHTCSEEE
T ss_pred HHHHHhhCCCeE----EEE-eCC--CC-H---HHHHHHHHHhhc-------c--CCE-EEeCCCCHHHHHHHHHhCcEEE
Confidence 999998888753 332 211 11 1 344455444221 0 124 4558899999999999999999
Q ss_pred EccCCCCCCcceeeeeeeccCCCCCeEEEcCC-CCchhccc--ccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 443 VTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-AGAGEQMH--EALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 443 vpSlrEGfnLValEamAcq~~~~~GvlVlSe~-aGaa~~L~--~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
.|| |.+++||||| |.|+|+|.. +|..+.+. .|++|+| |++++|++|.+++++++.
T Consensus 288 ~~s-----g~~~lEA~a~-----G~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~~~ 345 (375)
T 3beo_A 288 TDS-----GGVQEEAPSL-----GVPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDKEA 345 (375)
T ss_dssp ECC-----HHHHHHHHHH-----TCCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCHHH
T ss_pred ECC-----CChHHHHHhc-----CCCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhChHh
Confidence 999 6679999999 667788864 66665553 3888987 999999999999986543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=169.49 Aligned_cols=177 Identities=13% Similarity=0.051 Sum_probs=123.0
Q ss_pred EEEEEeecccCchhhhhhhcc--chhhhc-cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQA--APRVID-TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT 388 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~--~~~~~~-~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~ 388 (1460)
.++.++|+++++....+.... .+.... .+.++++++||+.+ ||++.+++||.++++++|+++ |+++|.
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~---- 414 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEPPSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG---- 414 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCCCCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----
T ss_pred ceeEcCCCcCCCCCCCCCCCCCCCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----
Confidence 467788886554321110011 111111 34457789999999 999999999999999999863 555552
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCe
Q psy775 389 DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 468 (1460)
Q Consensus 389 ~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gv 468 (1460)
+++..+++++ .+.+.+.. ...+.|.|.++++++..+|+.||+||+||.+ |||++++||||| |.|
T Consensus 415 ~g~~~~~l~~----~~~~~~l~------~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~-----G~P 478 (568)
T 2vsy_A 415 PGEADARLRA----FAHAQGVD------AQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT-----GCP 478 (568)
T ss_dssp STTHHHHHHH----HHHHTTCC------GGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT-----TCC
T ss_pred CHHHHHHHHH----HHHHcCCC------hhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC-----CCC
Confidence 3333334444 33333211 0224556999999999999999999999999 999999999999 677
Q ss_pred EEE-------cCCC-------CchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 469 LIV-------SPFA-------GAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 469 lVl-------Se~a-------Gaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
+|+ |..+ |..+.+.+ |+++++++|.++++++...++++.+. ++.+
T Consensus 479 vv~~~g~~~~s~~~~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~~~~~~~~~~~-~~~~ 537 (568)
T 2vsy_A 479 VLTTPGETFAARVAGSLNHHLGLDEMNVA-------DDAAFVAKAVALASDPAALTALHARV-DVLR 537 (568)
T ss_dssp EEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHCHHHHHHHHHHH-HHHH
T ss_pred EEeccCCCchHHHHHHHHHHCCChhhhcC-------CHHHHHHHHHHHhcCHHHHHHHHHHH-HHhh
Confidence 788 8887 77665543 89999999999998766555554444 4444
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.9e-14 Score=169.61 Aligned_cols=142 Identities=9% Similarity=0.057 Sum_probs=108.6
Q ss_pred CCEEEEEEcCc-cccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRL-d~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
+++.|++++|+ .+.||+..+++||+++.+++|+. .++.|+.+|.+... .+.+ ...
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG~~~~~--------------------~~l~---~~~ 295 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVGEKHKD--------------------IALG---KGI 295 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEESCCCC--------------------EEEE---TTE
T ss_pred CCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEcCCchh--------------------hhcC---CcC
Confidence 45578899997 68999999999999998888861 12467777754311 0111 123
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|.++.+|+.++|+.||+||+||..||||++++||||| |.|+|++ .+|..+..
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~-----G~PVV~~-~~g~~e~v----------------- 352 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF-----GLRVITN-KYENKDLS----------------- 352 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT-----TCEEEEE-CBTTBCGG-----------------
T ss_pred cEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC-----CCcEEEe-CCCcchhh-----------------
Confidence 466789999999999999999999999999999999999999 7788875 45544410
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
.+ | .++++|+|.|++++|++|.++++++..
T Consensus 353 ----------------------------~~---~-----~~G~lv~~~d~~~la~ai~~ll~~~~~ 382 (413)
T 2x0d_A 353 ----------------------------NW---H-----SNIVSLEQLNPENIAETLVELCMSFNN 382 (413)
T ss_dssp ----------------------------GT---B-----TTEEEESSCSHHHHHHHHHHHHHHTC-
T ss_pred ----------------------------hc---C-----CCEEEeCCCCHHHHHHHHHHHHcCHHH
Confidence 00 1 356899999999999999999986543
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=144.50 Aligned_cols=147 Identities=16% Similarity=0.232 Sum_probs=110.9
Q ss_pred CCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 737 IDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 737 ~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
+..++++|+++||+.+.||+...++|++++ |++ .|+.+|.+... +++++++.++.....
T Consensus 19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~~~---------~~l~~~~~~~~~~l~---- 77 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSKG---------DHAERYARKIMKIAP---- 77 (177)
T ss_dssp CCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCTT---------STHHHHHHHHHHHSC----
T ss_pred cCCCCCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCccH---------HHHHHHHHhhhcccC----
Confidence 346788999999999999999999999886 554 46666644321 123333331111111
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
+.+.+.|.++.+|+..+|+.||++++||..||++++++|||+| +.|+|+|..+|..+.+.
T Consensus 78 -~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~-----G~PvI~~~~~~~~e~i~-------------- 137 (177)
T 2f9f_A 78 -DNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-----GKPVIAVNEGGFKETVI-------------- 137 (177)
T ss_dssp -TTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-----TCCEEEESSHHHHHHCC--------------
T ss_pred -CcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc-----CCcEEEeCCCCHHHHhc--------------
Confidence 1166779999999999999999999999999999999999999 78999999876555110
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
.-..++++ |.|+++++++|.++++++..
T Consensus 138 ---------------------------------------~~~~g~~~-~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 138 ---------------------------------------NEKTGYLV-NADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp ---------------------------------------BTTTEEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred ---------------------------------------CCCccEEe-CCCHHHHHHHHHHHHhCHHH
Confidence 01346788 99999999999999988764
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-12 Score=151.02 Aligned_cols=242 Identities=11% Similarity=0.089 Sum_probs=150.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhh-c-cCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGM-L-GCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gL-L-~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|+.....++..+..+. .++++.+..|- +.+...+.. +...+.+-+ . .+|.+-..+....+.|.+
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~----~~ip~v~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 158 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFY----QRIPVGHVEAG-LRTGDLYSP--WPEEANRTLTGHLAMYHFSPTETSRQNLLR 158 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHT----TTCCEEEESCC-CCCSCTTSS--TTHHHHHHHHHTTCSEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHH----HCCCEEEEecc-cccccccCC--CchHhhHHHHHhhccEEEcCcHHHHHHHHH
Confidence 36999999853334443333222 24677665553 222222222 222333332 1 389988888776666543
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeeccc-Cchhhhhhhcc--c---hhhhc------cCC-eEEEEecCcccc-C
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAI-PYERFVQLAQA--A---PRVID------TKQ-KIVLGVDRLDYT-K 354 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGI-D~~~f~~~~~~--~---~~~~~------~~~-kvIL~VgRLd~~-K 354 (1460)
.|.. ..++.++|+|+ |...+...... . ....+ .++ .+++++||+.+. |
T Consensus 159 -----~g~~-------------~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k 220 (384)
T 1vgv_A 159 -----ENVA-------------DSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR 220 (384)
T ss_dssp -----TTCC-------------GGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH
T ss_pred -----cCCC-------------hhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch
Confidence 1221 12356788884 44333221100 0 01111 223 467899999987 9
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q psy775 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 434 (1460)
Q Consensus 355 GI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aL 434 (1460)
|+..+++|+.++.+++|++ .++.++.+ .+ +++++++++++. . ..| .+.|.++.+++..+
T Consensus 221 g~~~li~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~-------~--~~v-~~~g~~~~~~~~~~ 279 (384)
T 1vgv_A 221 GFEEICHALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH-------V--KNV-ILIDPQEYLPFVWL 279 (384)
T ss_dssp HHHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT-------C--TTE-EEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc-------C--CCE-EEeCCCCHHHHHHH
Confidence 9999999999999988875 34433211 12 233444444321 0 134 44588889999999
Q ss_pred HHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC-CCchhccc--ccEEECCCCHHHHHHHHHHHcCCCHHH
Q psy775 435 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-AGAGEQMH--EALICNPYEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 435 Y~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~-aGaa~~L~--~allVNP~D~~elA~AI~~aL~m~~~e 509 (1460)
|+.||++|.|| |.+.+||||| |.|+|+|.. +|..+.+. .|++|+| |+++++++|.++|++++..
T Consensus 280 ~~~ad~~v~~S-----g~~~lEA~a~-----G~PvI~~~~~~~~~e~v~~g~g~lv~~-d~~~la~~i~~ll~d~~~~ 346 (384)
T 1vgv_A 280 MNHAWLILTDS-----GGIQEEAPSL-----GKPVLVMRDTTERPEAVTAGTVRLVGT-DKQRIVEEVTRLLKDENEY 346 (384)
T ss_dssp HHHCSEEEESS-----STGGGTGGGG-----TCCEEEESSCCSCHHHHHHTSEEEECS-SHHHHHHHHHHHHHCHHHH
T ss_pred HHhCcEEEECC-----cchHHHHHHc-----CCCEEEccCCCCcchhhhCCceEEeCC-CHHHHHHHHHHHHhChHHH
Confidence 99999999999 4458999999 667799987 66555553 4899988 9999999999999865433
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.39 E-value=6.9e-12 Score=145.89 Aligned_cols=242 Identities=12% Similarity=0.083 Sum_probs=145.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhc--cCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML--GCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL--~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|++....++..+..+. .++++. ..|.++.+...+.. +.....+.++ .+|.+-..+....+.+.+
T Consensus 91 ~pDvv~~~~~~~~~~~~~~~a~~----~~ip~v-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~ 163 (376)
T 1v4v_A 91 GADYVLVHGDTLTTFAVAWAAFL----EGIPVG-HVEAGLRSGNLKEP--FPEEANRRLTDVLTDLDFAPTPLAKANLLK 163 (376)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHH----TTCCEE-EETCCCCCSCTTSS--TTHHHHHHHHHHHCSEEEESSHHHHHHHHT
T ss_pred CCCEEEEeCChHHHHHHHHHHHH----hCCCEE-EEeCCCccccccCC--CchHHHHHHHHHHhceeeCCCHHHHHHHHH
Confidence 36999999876555554443322 146664 45555433222221 2222333222 378877777666555543
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecc-cCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIA-IPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiG-ID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
.|.. ..++.+++++ +|...+.............++.+++++||+...||+..+++|++++.
T Consensus 164 -----~g~~-------------~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~ 225 (376)
T 1v4v_A 164 -----EGKR-------------EEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVA 225 (376)
T ss_dssp -----TTCC-------------GGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHH
T ss_pred -----cCCC-------------cceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHHHHHHHH
Confidence 1211 1235566765 45433322111111101133456778999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|+++ ++.++ ++.+ .++++++++++. . ..| .+.|.++..++..+|+.||++|.||
T Consensus 226 ~~~~~~~----lv~~~----g~~~---~~~~~l~~~~~~-------~--~~v-~~~g~~g~~~~~~~~~~ad~~v~~S-- 282 (376)
T 1v4v_A 226 EAFPHLT----FVYPV----HLNP---VVREAVFPVLKG-------V--RNF-VLLDPLEYGSMAALMRASLLLVTDS-- 282 (376)
T ss_dssp HHCTTSE----EEEEC----CSCH---HHHHHHHHHHTT-------C--TTE-EEECCCCHHHHHHHHHTEEEEEESC--
T ss_pred hhCCCeE----EEEEC----CCCH---HHHHHHHHHhcc-------C--CCE-EEECCCCHHHHHHHHHhCcEEEECC--
Confidence 9898863 33332 1122 233444444321 0 134 4558888889999999999999999
Q ss_pred CCCCcceeeeeeeccCCCCCeEEEcC-CCCchhccc--ccEEECCCCHHHHHHHHHHHcCCCHHH
Q psy775 448 DGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMH--EALICNPYEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 448 EGfnLValEamAcq~~~~~GvlVlSe-~aGaa~~L~--~allVNP~D~~elA~AI~~aL~m~~~e 509 (1460)
+|+ .+||||| |.|+|++. .+|..+.+. .|++++ .|+++++++|.++|++++..
T Consensus 283 ~g~---~lEA~a~-----G~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~~~~ 338 (376)
T 1v4v_A 283 GGL---QEEGAAL-----GVPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENPEEL 338 (376)
T ss_dssp HHH---HHHHHHT-----TCCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCHHHH
T ss_pred cCH---HHHHHHc-----CCCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhChHhh
Confidence 543 7799999 56668774 455554442 378885 49999999999999865433
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2e-12 Score=153.99 Aligned_cols=145 Identities=12% Similarity=0.151 Sum_probs=112.0
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++++|+++||+.+.||+ ++.+.+++|+ +.|+.+|.+. +. ..+..+.
T Consensus 221 ~~~~i~~vGrl~~~Kg~------~~~l~~~~~~----~~l~ivG~g~-----------------~~-------~~~l~~~ 266 (406)
T 2hy7_A 221 EGIHAVAVGSMLFDPEF------FVVASKAFPQ----VTFHVIGSGM-----------------GR-------HPGYGDN 266 (406)
T ss_dssp SSEEEEEECCTTBCHHH------HHHHHHHCTT----EEEEEESCSS-----------------CC-------CTTCCTT
T ss_pred CCcEEEEEeccccccCH------HHHHHHhCCC----eEEEEEeCch-----------------HH-------hcCCCCC
Confidence 34789999999999999 5566677886 4566666331 11 1222333
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeee-------eeccCCCCceEEEcCCCCcchhhhhhhhcCcccc
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFV-------ACQINEPPGVLIVSPFAGAGEQMHEALICNPYEI 892 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~Eym-------Ac~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~ 892 (1460)
+.|.|.++.+|+.++|+.||++|+||..|||+++.+||| || +.|+|+|.. ...
T Consensus 267 V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~-----G~PVIas~~--v~~------------- 326 (406)
T 2hy7_A 267 VIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFF-----GLPAVCPNA--VVG------------- 326 (406)
T ss_dssp EEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHH-----TCCEEEEGG--GTC-------------
T ss_pred EEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhC-----CCcEEEehh--ccc-------------
Confidence 677899999999999999999999999999999999999 99 788999875 111
Q ss_pred hhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEE-eCCCCHHHHHHHHHHHhCCCHHHHHHHHH
Q psy775 893 DAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI-CNPYEIDAAAEVIHRALTMPEDERTLRMN 971 (1460)
Q Consensus 893 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~all-VnP~d~~~iA~ai~~aL~m~~~er~~r~~ 971 (1460)
+ ..+++ ++|.|++++|++|.++++++.
T Consensus 327 ------------------------------------~--------~~G~l~v~~~d~~~la~ai~~ll~~~~-------- 354 (406)
T 2hy7_A 327 ------------------------------------P--------YKSRFGYTPGNADSVIAAITQALEAPR-------- 354 (406)
T ss_dssp ------------------------------------S--------CSSEEEECTTCHHHHHHHHHHHHHCCC--------
T ss_pred ------------------------------------C--------cceEEEeCCCCHHHHHHHHHHHHhCcc--------
Confidence 0 23577 999999999999999998775
Q ss_pred HHHhHHHhcCHHHHHHHHHHH
Q psy775 972 YLRKREKVHDVNYWMRSFLKG 992 (1460)
Q Consensus 972 ~~~~~v~~~~~~~W~~~~l~~ 992 (1460)
.++...++++..++++++-
T Consensus 355 --~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 355 --VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp --CCCSCCCBHHHHHHHHHCG
T ss_pred --hhhhhcCCHHHHHHHHHHh
Confidence 1345667888888777655
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.5e-12 Score=155.15 Aligned_cols=170 Identities=14% Similarity=0.086 Sum_probs=127.5
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
.+++++++|+.+ ||++..++||.++++++|++ .|+.+|. +++ .++++++.+.+.+.. ...+
T Consensus 376 ~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~----~l~i~G~----~g~----~~~~l~~~~~~~~l~------~~~v 436 (568)
T 2vsy_A 376 QGVVLCCFNNSY-KLNPQSMARMLAVLREVPDS----VLWLLSG----PGE----ADARLRAFAHAQGVD------AQRL 436 (568)
T ss_dssp TSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTC----EEEEECC----STT----HHHHHHHHHHHTTCC------GGGE
T ss_pred CCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCc----EEEEecC----CHH----HHHHHHHHHHHcCCC------hhHE
Confidence 446779999999 99999999999999999985 5666662 222 334555555554321 0236
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEE-------cCCC-------Ccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV-------SPFA-------GAGEQMHEALI 886 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIl-------Se~a-------G~~~~L~~~l~ 886 (1460)
.|.|.++.+++..+|+.||++|+||.+ |||++.+|||+| |.|+|+ |..+ |..+
T Consensus 437 ~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~-----G~Pvv~~~g~~~~s~~~~~~l~~~g~~e------- 503 (568)
T 2vsy_A 437 VFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT-----GCPVLTTPGETFAARVAGSLNHHLGLDE------- 503 (568)
T ss_dssp EEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT-----TCCEEBCCCSSGGGSHHHHHHHHHTCGG-------
T ss_pred EeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC-----CCCEEeccCCCchHHHHHHHHHHCCChh-------
Confidence 778999999999999999999999999 999999999999 678888 5544 2222
Q ss_pred cCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH
Q psy775 887 CNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER 966 (1460)
Q Consensus 887 vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er 966 (1460)
++.+ |+++++++|.+.++.+...+
T Consensus 504 ------------------------------------------------------~v~~--~~~~la~~i~~l~~~~~~~~ 527 (568)
T 2vsy_A 504 ------------------------------------------------------MNVA--DDAAFVAKAVALASDPAALT 527 (568)
T ss_dssp ------------------------------------------------------GBCS--SHHHHHHHHHHHHHCHHHHH
T ss_pred ------------------------------------------------------hhcC--CHHHHHHHHHHHhcCHHHHH
Confidence 1111 89999999999998665444
Q ss_pred HHHHHHHHhHH---HhcCHHHHHHHHHHHHhhhhhc
Q psy775 967 TLRMNYLRKRE---KVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 967 ~~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+.+.+ .++.+ ..+++..+++++.+.+.+.+.+
T Consensus 528 ~~~~~-~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 528 ALHAR-VDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHH-HHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHH-HHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44444 45555 6789999999988888777653
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=143.10 Aligned_cols=172 Identities=13% Similarity=0.077 Sum_probs=111.7
Q ss_pred EEEEeecccCchhhhhhhccchhhh-ccCCe-EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCCh
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVI-DTKQK-IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDV 390 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~-~~~~k-vIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~ 390 (1460)
++.++|+|+|.+.|.... ...... ..+++ +++++||+.+.||.+.+++|++++.+ ++.++.++.+ +
T Consensus 155 ~~~~i~n~v~~~~~~~~~-~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~----~ 222 (364)
T 1f0k_A 155 NAEVVGNPVRTDVLALPL-PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGK----G 222 (364)
T ss_dssp SCEECCCCCCHHHHTSCC-HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCT----T
T ss_pred CceEeCCccchhhcccch-hhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCC----c
Confidence 356889999988774321 101111 13445 55567899999999999999998743 2333333311 1
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEE
Q psy775 391 KEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLI 470 (1460)
Q Consensus 391 ~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlV 470 (1460)
+ ++++++. +.+.+. ..|. +.|.+ +++..+|+.||++|+|| | +++++||||| |.|+|
T Consensus 223 ~-~~~l~~~----~~~~~~-------~~v~-~~g~~--~~~~~~~~~ad~~v~~s---g-~~~~~EAma~-----G~Pvi 278 (364)
T 1f0k_A 223 S-QQSVEQA----YAEAGQ-------PQHK-VTEFI--DDMAAAYAWADVVVCRS---G-ALTVSEIAAA-----GLPAL 278 (364)
T ss_dssp C-HHHHHHH----HHHTTC-------TTSE-EESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHH-----TCCEE
T ss_pred h-HHHHHHH----HhhcCC-------CceE-Eecch--hhHHHHHHhCCEEEECC---c-hHHHHHHHHh-----CCCEE
Confidence 2 2334333 333221 1234 45777 78899999999999999 4 9999999999 67789
Q ss_pred EcCCCCch-------hcc---cccEEECCCC--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 471 VSPFAGAG-------EQM---HEALICNPYE--IDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 471 lSe~aGaa-------~~L---~~allVNP~D--~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
+|..+|.. +.+ +.|++++|.| +++++++|.++ + ++.++...+..++....
T Consensus 279 ~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~-~~~~~~~~~~~~~~~~~ 340 (364)
T 1f0k_A 279 FVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RETLLTMAERARAASIP 340 (364)
T ss_dssp ECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HHHHHHHHHHHHHTCCT
T ss_pred EeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--C-HHHHHHHHHHHHHhhcc
Confidence 99988752 233 2389999988 99999999887 3 44433333333444433
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=5.6e-11 Score=138.24 Aligned_cols=164 Identities=9% Similarity=0.079 Sum_probs=113.0
Q ss_pred CEEEEEEcCcccc-CCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 741 QKIVLGVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 741 kkiIl~VdRLd~~-KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
+.+++++||+.+. ||+...++|+.++.+++|++ .++.++.+ .+ +++++++++++ .. +-
T Consensus 206 ~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~---~~-------~~ 264 (384)
T 1vgv_A 206 KMILVTGHRRESFGRGFEEICHALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILG---HV-------KN 264 (384)
T ss_dssp EEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHT---TC-------TT
T ss_pred CEEEEEeCCccccchHHHHHHHHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhh---cC-------CC
Confidence 4578899999987 99999999999999999874 34433222 12 23445554432 11 12
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC-CCcchhhhhhhhcCcccchhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-AGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~-aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
+.+.|.++++++..+|+.||++|.|| |.+.+|||+| +.|+|+|.. +|..+.. +
T Consensus 265 v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~-----G~PvI~~~~~~~~~e~v---------------~- 318 (384)
T 1vgv_A 265 VILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSL-----GKPVLVMRDTTERPEAV---------------T- 318 (384)
T ss_dssp EEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGG-----TCCEEEESSCCSCHHHH---------------H-
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHc-----CCCEEEccCCCCcchhh---------------h-
Confidence 56677888899999999999999999 3458999999 789999987 5544410 1
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
. ..+++++| |++++|++|.++++.+...++++ +..+++..
T Consensus 319 -----------------------------~---------g~g~lv~~-d~~~la~~i~~ll~d~~~~~~~~-~~~~~~~~ 358 (384)
T 1vgv_A 319 -----------------------------A---------GTVRLVGT-DKQRIVEEVTRLLKDENEYQAMS-RAHNPYGD 358 (384)
T ss_dssp -----------------------------H---------TSEEEECS-SHHHHHHHHHHHHHCHHHHHHHH-SSCCTTCC
T ss_pred -----------------------------C---------CceEEeCC-CHHHHHHHHHHHHhChHHHhhhh-hccCCCcC
Confidence 0 13588988 99999999999998654433333 23345555
Q ss_pred hcCHHHHHHHHHH
Q psy775 979 VHDVNYWMRSFLK 991 (1460)
Q Consensus 979 ~~~~~~W~~~~l~ 991 (1460)
.++++..++.+.+
T Consensus 359 ~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 359 GQACSRILEALKN 371 (384)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 5555555554443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=143.07 Aligned_cols=233 Identities=10% Similarity=-0.030 Sum_probs=140.6
Q ss_pred CCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHH
Q psy775 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 291 (1460)
Q Consensus 212 gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~ 291 (1460)
.|+|.++.++++. .++.. .. . ++.+..+ -+.... ..+.+ +-.+|.|-.++....+.|.+
T Consensus 112 pDiv~~~~~~~~~--~~~~~-~~----~-p~~~~~~-~~~~~~------~~~~~---~~~~d~ii~~S~~~~~~l~~--- 170 (374)
T 2xci_A 112 PKALIVVEREFWP--SLIIF-TK----V-PKILVNA-YAKGSL------IEKIL---SKKFDLIIMRTQEDVEKFKT--- 170 (374)
T ss_dssp CSEEEEESCCCCH--HHHHH-CC----S-CEEEEEE-CCCCCH------HHHHH---HTTCSEEEESCHHHHHHHHT---
T ss_pred CCEEEEECccCcH--HHHHH-Hh----C-CEEEEEe-ecCchH------HHHHH---HHhCCEEEECCHHHHHHHHH---
Confidence 6899888888764 34432 11 1 3433322 221100 11222 33589999999988776654
Q ss_pred hhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCC
Q psy775 292 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 371 (1460)
Q Consensus 292 riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P 371 (1460)
+|. . ++.++|+|. |......... -..++++++++. .||+..+++||.++.+++|
T Consensus 171 --~g~--------------~-ki~vi~n~~----f~~~~~~~~~---l~~~vi~~~~~~--~k~~~~ll~A~~~l~~~~p 224 (374)
T 2xci_A 171 --FGA--------------K-RVFSCGNLK----FICQKGKGIK---LKGEFIVAGSIH--TGEVEIILKAFKEIKKTYS 224 (374)
T ss_dssp --TTC--------------C-SEEECCCGG----GCCCCCSCCC---CSSCEEEEEEEC--GGGHHHHHHHHHHHHTTCT
T ss_pred --cCC--------------C-eEEEcCCCc----cCCCcChhhh---hcCCEEEEEeCC--CchHHHHHHHHHHHHhhCC
Confidence 121 1 455667652 2111000000 123677888864 5899999999999998899
Q ss_pred CCCCcEEEEEEEcCCCCChHHH-HHHHHHHHHHHHHHhcccC--CCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-C
Q psy775 372 EHLEKVTLLQIAVPSRTDVKEY-QDLKEEMDQLVGRINGRFT--TPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-R 447 (1460)
Q Consensus 372 ~~~~kvvLvqig~psr~~~~ey-~~L~~ev~~lv~~IN~~fg--~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-r 447 (1460)
+++ |+++|. +++. +++++ ++.+.+..+. ..+. ..+++.+. .+++..+|+.||++++||. .
T Consensus 225 ~~~----lvivG~-----g~~~~~~l~~----~~~~~gl~~~~~~~~~-~~v~~~~~--~~dl~~~y~~aDv~vl~ss~~ 288 (374)
T 2xci_A 225 SLK----LILVPR-----HIENAKIFEK----KARDFGFKTSFFENLE-GDVILVDR--FGILKELYPVGKIAIVGGTFV 288 (374)
T ss_dssp TCE----EEEEES-----SGGGHHHHHH----HHHHTTCCEEETTCCC-SSEEECCS--SSCHHHHGGGEEEEEECSSSS
T ss_pred CcE----EEEECC-----CHHHHHHHHH----HHHHCCCceEEecCCC-CcEEEECC--HHHHHHHHHhCCEEEECCccc
Confidence 863 555552 2332 23443 3333332210 0000 12445453 4789999999999888764 5
Q ss_pred CCCCcceeeeeeeccCCCCCeEEEc-CCCCchhcc----cccEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 448 DGMNLVAKEFVACQINEPPGVLIVS-PFAGAGEQM----HEALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 448 EGfnLValEamAcq~~~~~GvlVlS-e~aGaa~~L----~~allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
|++|++++||||| |.|+|++ ...|+.+.+ ..|.++.|.|++++|++|.++|++ +..+++.
T Consensus 289 e~gg~~~lEAmA~-----G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg 353 (374)
T 2xci_A 289 NIGGHNLLEPTCW-----GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVE 353 (374)
T ss_dssp SSCCCCCHHHHTT-----TCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHH
T ss_pred CCCCcCHHHHHHh-----CCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHH
Confidence 7789999999999 5666765 455555433 247888899999999999999986 4333333
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-11 Score=137.35 Aligned_cols=165 Identities=11% Similarity=0.125 Sum_probs=112.5
Q ss_pred CCEEEEEEcCcccc-CCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~-KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
++.++++++|+.+. ||+...++|++++.+++|++ .++ ++.+. + + +++++++++++ .. +
T Consensus 205 ~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~----~~i-~~~g~--~-~---~~~~~~~~~~~---~~-------~ 263 (375)
T 3beo_A 205 NRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDV----QVV-YPVHM--N-P---VVRETANDILG---DY-------G 263 (375)
T ss_dssp SEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTE----EEE-EECCS--C-H---HHHHHHHHHHT---TC-------T
T ss_pred CCeEEEEecccccchhHHHHHHHHHHHHHhhCCCe----EEE-EeCCC--C-H---HHHHHHHHHhh---cc-------C
Confidence 45677899999986 99999999999998889975 333 23211 1 1 34455554422 11 1
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC-CCcchhhhhhhhcCcccchhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-AGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~-aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
-+.|.|.+++.++..+|+.||++|.|| |.+.+|||+| +.|+|+|.. +|..+.+ +
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~-----G~Pvi~~~~~~~~~e~v---------------~ 318 (375)
T 3beo_A 264 RIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSL-----GVPVLVLRDTTERPEGI---------------E 318 (375)
T ss_dssp TEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHH-----TCCEEECSSCCSCHHHH---------------H
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhc-----CCCEEEecCCCCCceee---------------c
Confidence 256778899999999999999999999 5669999999 789999964 6544310 0
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
+ ..+++++| |++++|++|.++++.+...++++ +..+++.
T Consensus 319 ------------------------------~---------g~g~~v~~-d~~~la~~i~~ll~~~~~~~~~~-~~~~~~~ 357 (375)
T 3beo_A 319 ------------------------------A---------GTLKLAGT-DEETIFSLADELLSDKEAHDKMS-KASNPYG 357 (375)
T ss_dssp ------------------------------T---------TSEEECCS-CHHHHHHHHHHHHHCHHHHHHHC-CCCCTTC
T ss_pred ------------------------------C---------CceEEcCC-CHHHHHHHHHHHHhChHhHhhhh-hcCCCCC
Confidence 0 14588887 99999999999998654333332 2234455
Q ss_pred HhcCHHHHHHHHHH
Q psy775 978 KVHDVNYWMRSFLK 991 (1460)
Q Consensus 978 ~~~~~~~W~~~~l~ 991 (1460)
..++++..++.+.+
T Consensus 358 ~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 358 DGRASERIVEAILK 371 (375)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 45555555544433
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.9e-09 Score=122.55 Aligned_cols=241 Identities=15% Similarity=0.147 Sum_probs=147.3
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhh--ccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGM--LGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gL--L~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|+.-...+|..+..+. .++++.. .|.+..+...+. |+.+++.+-+ -.+|++-..+....++|.+
T Consensus 111 kPDvVi~~g~~~~~~~~~~aa~~----~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l~~ 183 (396)
T 3dzc_A 111 QPDVVLVHGDTATTFAASLAAYY----QQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANLLQ 183 (396)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHT----TTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCchhHHHHHHHHHH----hCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH
Confidence 46999999876666665554432 2577653 333444433322 4445555554 2479998999888888775
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeec-ccCchhhhhhhc-c----chhhhc------cCCeE-EEEecCccc-cC
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPI-AIPYERFVQLAQ-A----APRVID------TKQKI-VLGVDRLDY-TK 354 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPi-GID~~~f~~~~~-~----~~~~~~------~~~kv-IL~VgRLd~-~K 354 (1460)
.|... .+|.++++ ++|...+..... . ...+++ .++++ ++..+|... .|
T Consensus 184 -----~G~~~-------------~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~ 245 (396)
T 3dzc_A 184 -----ENYNA-------------ENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG 245 (396)
T ss_dssp -----TTCCG-------------GGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT
T ss_pred -----cCCCc-------------CcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh
Confidence 23211 12334443 456433322110 0 011111 23454 456767654 48
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q psy775 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 434 (1460)
Q Consensus 355 GI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aL 434 (1460)
|+..+++|+.++.+++|++ .++..+.+ .+ .+++.+++.. +. ...|. +.+++++.++..+
T Consensus 246 ~~~~ll~A~~~l~~~~~~~----~~v~~~g~----~~---~~~~~l~~~~---~~------~~~v~-~~~~lg~~~~~~l 304 (396)
T 3dzc_A 246 GFERICQALITTAEQHPEC----QILYPVHL----NP---NVREPVNKLL---KG------VSNIV-LIEPQQYLPFVYL 304 (396)
T ss_dssp HHHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHT---TT------CTTEE-EECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCc----eEEEEeCC----Ch---HHHHHHHHHH---cC------CCCEE-EeCCCCHHHHHHH
Confidence 8999999999999999875 24433222 12 2334444331 11 12344 4588999999999
Q ss_pred HHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc-CCCCchhcc--cccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 435 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS-PFAGAGEQM--HEALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 435 Y~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS-e~aGaa~~L--~~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
|+.||++|.+| | |++ .||++| +.|+|++ +.++..+.+ +.+++|.+ |+++++++|.++|+++..
T Consensus 305 ~~~ad~vv~~S---G-g~~-~EA~a~-----G~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~~~ 370 (396)
T 3dzc_A 305 MDRAHIILTDS---G-GIQ-EEAPSL-----GKPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDPQA 370 (396)
T ss_dssp HHHCSEEEESC---S-GGG-TTGGGG-----TCCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCHHH
T ss_pred HHhcCEEEECC---c-cHH-HHHHHc-----CCCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCHHH
Confidence 99999999999 6 666 999999 5566877 555544444 23677765 899999999999986443
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=98.99 E-value=5.6e-09 Score=121.36 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=98.5
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++.+++++||+...||+...++|++++.+++|++ .++.++.+ .+ .++++++++++ . . +-
T Consensus 198 ~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~----~lv~~~g~----~~---~~~~~l~~~~~---~---~----~~ 256 (376)
T 1v4v_A 198 GPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHL----TFVYPVHL----NP---VVREAVFPVLK---G---V----RN 256 (376)
T ss_dssp SCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTS----EEEEECCS----CH---HHHHHHHHHHT---T---C----TT
T ss_pred CCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCe----EEEEECCC----CH---HHHHHHHHHhc---c---C----CC
Confidence 4567788999999999999999999998889985 33332221 12 23445555442 1 1 12
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC-CCcchhhhhhhhcCcccchhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-AGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~-aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
+.+.|.+++.++..+|+.||++|.+| +|+ .+||||| +.|+|++.. +|..+ +++
T Consensus 257 v~~~g~~g~~~~~~~~~~ad~~v~~S--~g~---~lEA~a~-----G~PvI~~~~~~~~~~---------------~~~- 310 (376)
T 1v4v_A 257 FVLLDPLEYGSMAALMRASLLLVTDS--GGL---QEEGAAL-----GVPVVVLRNVTERPE---------------GLK- 310 (376)
T ss_dssp EEEECCCCHHHHHHHHHTEEEEEESC--HHH---HHHHHHT-----TCCEEECSSSCSCHH---------------HHH-
T ss_pred EEEECCCCHHHHHHHHHhCcEEEECC--cCH---HHHHHHc-----CCCEEeccCCCcchh---------------hhc-
Confidence 56678888889999999999999999 665 7799999 678888754 44333 101
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
. ..+++++ .|++++|++|.++|+.+..
T Consensus 311 --------------------------------~------g~g~lv~-~d~~~la~~i~~ll~d~~~ 337 (376)
T 1v4v_A 311 --------------------------------A------GILKLAG-TDPEGVYRVVKGLLENPEE 337 (376)
T ss_dssp --------------------------------H------TSEEECC-SCHHHHHHHHHHHHTCHHH
T ss_pred --------------------------------C------CceEECC-CCHHHHHHHHHHHHhChHh
Confidence 0 1357775 4999999999999986543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.2e-08 Score=119.58 Aligned_cols=241 Identities=13% Similarity=0.160 Sum_probs=146.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhcc--CceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLG--CDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~--aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|+.-...++..+..+. .++++. ..|.+..+...++ |+++++.+-++. +|++-..+.++.++|.+
T Consensus 114 kPD~Vi~~gd~~~~l~~~laA~~----~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l~~ 186 (403)
T 3ot5_A 114 NPDIVLVHGDTTTSFAAGLATFY----QQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENLLA 186 (403)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHH----TTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCchhHHHHHHHHHH----hCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH
Confidence 47999999976555654444332 256764 3333443333332 344555544332 78988899988888876
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeec-ccCchhhhhhhccchhhhc--cCC-eEEEEecCccc-cCCHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPI-AIPYERFVQLAQAAPRVID--TKQ-KIVLGVDRLDY-TKGLVHRLKAF 363 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPi-GID~~~f~~~~~~~~~~~~--~~~-kvIL~VgRLd~-~KGI~~lL~Af 363 (1460)
.|... -+|.++++ ++|...+..........++ .++ .+++.++|... -|++..+++|+
T Consensus 187 -----~Gi~~-------------~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~ 248 (403)
T 3ot5_A 187 -----EGKDP-------------ATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQGMFEAV 248 (403)
T ss_dssp -----TTCCG-------------GGEEECCCHHHHHHHHHSCTTCCCHHHHSCTTCEEEEECCCCHHHHTTHHHHHHHHH
T ss_pred -----cCCCc-------------ccEEEeCCchHHHHHhhhhhhcchHHHHhccCCCEEEEEeCcccccCcHHHHHHHHH
Confidence 23211 12334433 5665443221110011111 233 45667888765 37899999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
.++.+++|++ .++..+.|. + .+++.+++.. +. +..|. +.++++..++..+|+.||++|.
T Consensus 249 ~~l~~~~~~~----~~v~~~~~~----~---~~~~~l~~~~---~~------~~~v~-l~~~l~~~~~~~l~~~ad~vv~ 307 (403)
T 3ot5_A 249 REIVESREDT----ELVYPMHLN----P---AVREKAMAIL---GG------HERIH-LIEPLDAIDFHNFLRKSYLVFT 307 (403)
T ss_dssp HHHHHHCTTE----EEEEECCSC----H---HHHHHHHHHH---TT------CTTEE-EECCCCHHHHHHHHHHEEEEEE
T ss_pred HHHHHhCCCc----eEEEecCCC----H---HHHHHHHHHh---CC------CCCEE-EeCCCCHHHHHHHHHhcCEEEE
Confidence 9999999975 244333221 2 2333444321 11 12344 4589999999999999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEc-CCCCchhccc--ccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVS-PFAGAGEQMH--EALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlS-e~aGaa~~L~--~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
+| | |+. +||++| +.|+|++ ..++..+.+. .+++|.+ |+++++++|.++|+++..
T Consensus 308 ~S---G-g~~-~EA~a~-----g~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~~~ 364 (403)
T 3ot5_A 308 DS---G-GVQ-EEAPGM-----GVPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNKES 364 (403)
T ss_dssp CC---H-HHH-HHGGGT-----TCCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCHHH
T ss_pred CC---c-cHH-HHHHHh-----CCCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCHHH
Confidence 88 2 333 999999 5556777 4555444442 3777876 999999999999986443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.91 E-value=4.8e-10 Score=124.20 Aligned_cols=87 Identities=18% Similarity=0.266 Sum_probs=70.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCC---
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS--- 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~--- 116 (1460)
++|+|+||||++...+|+...++++++++|++|+++ | .++|+|||++..+...+... ..++|+||+.+..+|+.
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~ 79 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYN 79 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEEC
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeec
Confidence 789999999999766666678999999999999999 8 99999999999888776543 67899999999886555
Q ss_pred ---ccccCCCccchhh
Q psy775 117 ---RFVHPIPTEFEDK 129 (1460)
Q Consensus 117 ---i~~~pI~ee~vde 129 (1460)
++..+++.+.+..
T Consensus 80 ~~~~~~~~l~~~~~~~ 95 (239)
T 1u02_A 80 NGSDRFLGVFDRIYED 95 (239)
T ss_dssp TTGGGGHHHHHHHHHH
T ss_pred ccccccchhhHHHHHH
Confidence 3445555544433
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.6e-09 Score=123.27 Aligned_cols=172 Identities=15% Similarity=0.084 Sum_probs=112.4
Q ss_pred CCE-EEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEE-EEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 740 KQK-IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTL-LQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 740 ~kk-iIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvL-vqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
+++ +++++||+.+.||....++|++++.+ + +.+ +.+|.+ + + +++++++.+.+..
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~----~~~l~i~G~~-----~-~----~~l~~~~~~~~~~------- 237 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLGD---S----VTIWHQSGKG-----S-Q----QSVEQAYAEAGQP------- 237 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHGG---G----EEEEEECCTT-----C-H----HHHHHHHHHTTCT-------
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhcC---C----cEEEEEcCCc-----h-H----HHHHHHHhhcCCC-------
Confidence 444 56667899999999999999998743 2 343 333322 1 2 2344444443311
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcch-hhhhhhhcCcccchhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE-QMHEALICNPYEIDAAA 896 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~-~L~~~l~vnP~~~~~~~ 896 (1460)
. +.+.|.+ +++..+|+.||++|.|| | +++.+|||+| +.|+|+|..+|... +. . .+
T Consensus 238 ~-v~~~g~~--~~~~~~~~~ad~~v~~s---g-~~~~~EAma~-----G~Pvi~~~~~g~~~~q~--------~----~~ 293 (364)
T 1f0k_A 238 Q-HKVTEFI--DDMAAAYAWADVVVCRS---G-ALTVSEIAAA-----GLPALFVPFQHKDRQQY--------W----NA 293 (364)
T ss_dssp T-SEEESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHH-----TCCEEECCCCCTTCHHH--------H----HH
T ss_pred c-eEEecch--hhHHHHHHhCCEEEECC---c-hHHHHHHHHh-----CCCEEEeeCCCCchhHH--------H----HH
Confidence 1 4556777 68899999999999999 4 8999999999 78999999988632 00 0 00
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE--IDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d--~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
+.++ ....+++++|.| ++++|++|.++ .++.++...+..+
T Consensus 294 --------------~~~~---------------------~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~~~~ 335 (364)
T 1f0k_A 294 --------------LPLE---------------------KAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAERAR 335 (364)
T ss_dssp --------------HHHH---------------------HTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHHHHH
T ss_pred --------------HHHH---------------------hCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHHHHH
Confidence 0110 001368899988 99999999877 4444444444446
Q ss_pred hHHHhcCHHHHHHHHHHHHhhhh
Q psy775 975 KREKVHDVNYWMRSFLKGMGTLI 997 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l~~l~~~~ 997 (1460)
+++..++++.-++.+.+.+.+..
T Consensus 336 ~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 336 AASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HTCCTTHHHHHHHHHHHHHTTC-
T ss_pred HhhccCHHHHHHHHHHHHHHHHH
Confidence 66677777777766666555443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.6e-09 Score=120.78 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=70.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc--ceeEccCCccccc--
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG--LTYAGNHGLEIIH-- 112 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~--~~~ig~hGaei~~-- 112 (1460)
++|||+||||++ ++..++++++++|++|+++ |+.++++|||+...+...+ ++.. ..++++||+.+..
T Consensus 7 li~~DlDGTLl~-----~~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~ 80 (282)
T 1rkq_A 7 LIAIDMDGTLLL-----PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAA 80 (282)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETT
T ss_pred EEEEeCCCCCCC-----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECC
Confidence 799999999997 3456999999999999999 9999999999988876554 3332 2578999999987
Q ss_pred CCCCccccCCCccchhhh
Q psy775 113 PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL 130 (1460)
.++.++..+++.+.+..+
T Consensus 81 ~~~~i~~~~l~~~~~~~i 98 (282)
T 1rkq_A 81 DGSTVAQTALSYDDYRFL 98 (282)
T ss_dssp TCCEEEECCBCHHHHHHH
T ss_pred CCeEEEEecCCHHHHHHH
Confidence 567778888998776665
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=3.3e-09 Score=117.96 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=70.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCccc-ccCCCCcc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEI-IHPDGSRF 118 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei-~~~g~~i~ 118 (1460)
++|||+||||++. +...++++++++|++++++ |+.++++|||+...+.....+....++++||+.+ ...++.++
T Consensus 14 li~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~~~~ 88 (268)
T 3r4c_A 14 VLLLDVDGTLLSF----ETHKVSQSSIDALKKVHDS-GIKIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSVIR 88 (268)
T ss_dssp EEEECSBTTTBCT----TTCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCCGGGTTSCCCEEEEGGGTEEEETTSCEEE
T ss_pred EEEEeCCCCCcCC----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHhHHHHhcCCCcEEEeCCcEEEEcCCeEEE
Confidence 7999999999973 3456999999999999999 9999999999987764433344456789999999 88888888
Q ss_pred ccCCCccchhhh
Q psy775 119 VHPIPTEFEDKV 130 (1460)
Q Consensus 119 ~~pI~ee~vdeL 130 (1460)
..+++.+.+..+
T Consensus 89 ~~~l~~~~~~~i 100 (268)
T 3r4c_A 89 KVAIPAQDFRKS 100 (268)
T ss_dssp ECCCCHHHHHHH
T ss_pred EecCCHHHHHHH
Confidence 888888766655
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.81 E-value=4.2e-09 Score=118.09 Aligned_cols=84 Identities=20% Similarity=0.328 Sum_probs=67.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCccccc-CCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIH-PDG 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~-~g~ 115 (1460)
++|||+||||++ +...++++++++|++ +++ |+.++++|||+...+...+ ++....++++||+.+.. .++
T Consensus 4 li~~DlDGTLl~-----~~~~i~~~~~~al~~-~~~-Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~ 76 (268)
T 1nf2_A 4 VFVFDLDGTLLN-----DNLEISEKDRRNIEK-LSR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (268)
T ss_dssp EEEEECCCCCSC-----TTSCCCHHHHHHHHH-HTT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred EEEEeCCCcCCC-----CCCccCHHHHHHHHH-HhC-CCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCC
Confidence 789999999997 345689999999999 888 9999999999988876655 33332578999999987 566
Q ss_pred CccccCCCccchhhh
Q psy775 116 SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 116 ~i~~~pI~ee~vdeL 130 (1460)
.++..+++.+.+..+
T Consensus 77 ~i~~~~l~~~~~~~i 91 (268)
T 1nf2_A 77 VILNEKIPPEVAKDI 91 (268)
T ss_dssp EEEECCBCHHHHHHH
T ss_pred EEEecCCCHHHHHHH
Confidence 777788888766655
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=4.3e-09 Score=117.48 Aligned_cols=86 Identities=17% Similarity=0.217 Sum_probs=71.3
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc----cceeEccCCcccccCC
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE----GLTYAGNHGLEIIHPD 114 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~----~~~~ig~hGaei~~~g 114 (1460)
-++|||+||||++. ...++++++++|++|+++ |++++|+|||++..+.+.++.. ...++++||+.+...|
T Consensus 5 kli~~DlDGTLl~~-----~~~i~~~~~~~l~~l~~~-g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 5 VLLLFDVDGTLTPP-----RLCQTDEMRALIKRARGA-GFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp EEEEECSBTTTBST-----TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred eEEEEeCcCCcCCC-----CCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 38999999999973 446899999999999999 9999999999998887777642 2467899999999888
Q ss_pred CCccccC----CCccchhhh
Q psy775 115 GSRFVHP----IPTEFEDKV 130 (1460)
Q Consensus 115 ~~i~~~p----I~ee~vdeL 130 (1460)
+.++..+ ++.+.+..+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i 98 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKF 98 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHH
Confidence 8888877 446655555
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.80 E-value=7e-09 Score=117.13 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=73.5
Q ss_pred hcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc--cceeEccCCccc
Q psy775 33 IGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE--GLTYAGNHGLEI 110 (1460)
Q Consensus 33 ~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~--~~~~ig~hGaei 110 (1460)
+....--+++||+||||++.. ...++++++++|++++++ |+.++++|||+...+...+..- ...++++||+.+
T Consensus 16 ~~~~~~kli~~DlDGTLl~~~----~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i 90 (283)
T 3dao_A 16 YFQGMIKLIATDIDGTLVKDG----SLLIDPEYMSVIDRLIDK-GIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVV 90 (283)
T ss_dssp ---CCCCEEEECCBTTTBSTT----CSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEE
T ss_pred hhccCceEEEEeCcCCCCCCC----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEE
Confidence 333444589999999999632 226899999999999999 9999999999988887666432 236899999999
Q ss_pred ccCCCCccccCCCccchhhh
Q psy775 111 IHPDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 111 ~~~g~~i~~~pI~ee~vdeL 130 (1460)
...++.++..+++.+.+..+
T Consensus 91 ~~~~~~i~~~~l~~~~~~~i 110 (283)
T 3dao_A 91 RTPKEILKTYPMDEDIWKGM 110 (283)
T ss_dssp ECSSCEEEECCCCHHHHHHH
T ss_pred EECCEEEEEecCCHHHHHHH
Confidence 99888888889988766655
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.77 E-value=6.1e-09 Score=116.87 Aligned_cols=85 Identities=13% Similarity=0.233 Sum_probs=69.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhH-HHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cc-cceeEccCCcccccCCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEET-KRTLQKLANLPDVHISIISGRNVHNVMEMVG-IE-GLTYAGNHGLEIIHPDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~-~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~-~~~~ig~hGaei~~~g~~ 116 (1460)
++|||+||||++- ...+++.+ +++|++|+++ |+.++|||||++..+...+. +. ...++++||+.+...|+.
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (271)
T 1rlm_A 5 VIVTDMDGTFLND-----AKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 78 (271)
T ss_dssp EEEECCCCCCSCT-----TSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEeCCCCCCCC-----CCcCCHHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeE
Confidence 7999999999972 34688885 9999999998 99999999999888876653 22 246889999999887777
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 79 i~~~~l~~~~~~~i 92 (271)
T 1rlm_A 79 LFHGELTRHESRIV 92 (271)
T ss_dssp EEECCCCHHHHHHH
T ss_pred EEEecCCHHHHHHH
Confidence 78888888766655
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.76 E-value=6.7e-09 Score=114.85 Aligned_cols=87 Identities=22% Similarity=0.248 Sum_probs=69.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc----cceeEccCCccccc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE----GLTYAGNHGLEIIH 112 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~----~~~~ig~hGaei~~ 112 (1460)
+.-++|||+||||++. +..+++++++||++|+++ +.++|||||++..+.+.++.. ...++++||+.+..
T Consensus 5 ~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~--i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~ 77 (246)
T 2amy_A 5 GPALCLFDVDGTLTAP-----RQKITKEMDDFLQKLRQK--IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYK 77 (246)
T ss_dssp CSEEEEEESBTTTBCT-----TSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEE
T ss_pred CceEEEEECCCCcCCC-----CcccCHHHHHHHHHHHhC--CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEe
Confidence 3458999999999973 356999999999999987 899999999988877777642 23578999999988
Q ss_pred CCCCccccCC----Cccchhhh
Q psy775 113 PDGSRFVHPI----PTEFEDKV 130 (1460)
Q Consensus 113 ~g~~i~~~pI----~ee~vdeL 130 (1460)
.++.++..++ +.+.+..+
T Consensus 78 ~~~~i~~~~l~~~l~~~~~~~i 99 (246)
T 2amy_A 78 DGKLLCRQNIQSHLGEALIQDL 99 (246)
T ss_dssp TTEEEEECCHHHHHCHHHHHHH
T ss_pred CCcEEEeeecccccCHHHHHHH
Confidence 7777777764 66655554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=7.5e-09 Score=114.95 Aligned_cols=85 Identities=21% Similarity=0.259 Sum_probs=69.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cccceeEccCCcccccCCCCcc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IEGLTYAGNHGLEIIHPDGSRF 118 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~~~~~ig~hGaei~~~g~~i~ 118 (1460)
+++||+||||++- ...++++++++|++++++ |+.++++|||+...+...+. +....++++||+.+...++.++
T Consensus 7 li~fDlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 80 (274)
T 3fzq_A 7 LLILDIDGTLRDE-----VYGIPESAKHAIRLCQKN-HCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLY 80 (274)
T ss_dssp EEEECSBTTTBBT-----TTBCCHHHHHHHHHHHHT-TCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEE
T ss_pred EEEEECCCCCCCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEE
Confidence 7999999999973 346899999999999999 99999999999887766553 2223478999999988877888
Q ss_pred ccCCCccchhhh
Q psy775 119 VHPIPTEFEDKV 130 (1460)
Q Consensus 119 ~~pI~ee~vdeL 130 (1460)
..+++.+.+..+
T Consensus 81 ~~~l~~~~~~~i 92 (274)
T 3fzq_A 81 NQSFNQRLIKEV 92 (274)
T ss_dssp ECCCCHHHHHHH
T ss_pred EcCCCHHHHHHH
Confidence 888888765555
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.74 E-value=5.4e-09 Score=119.85 Aligned_cols=86 Identities=19% Similarity=0.222 Sum_probs=70.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh--c----ccc--ceeEccCCcccc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV--G----IEG--LTYAGNHGLEII 111 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l--~----~~~--~~~ig~hGaei~ 111 (1460)
++|||+||||++.. ...++++++++|++|+++ |+.++++|||++..+...+ . +.. ..++++||+.+.
T Consensus 29 li~~DlDGTLl~~~----~~~is~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~ 103 (301)
T 2b30_A 29 LLLIDFDGTLFVDK----DIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVY 103 (301)
T ss_dssp EEEEETBTTTBCCT----TTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEE
T ss_pred EEEEECCCCCcCCC----CCccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEE
Confidence 89999999999731 456899999999999999 9999999999988776555 2 321 347899999998
Q ss_pred c-CCCCccccCCCccchhhh
Q psy775 112 H-PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 112 ~-~g~~i~~~pI~ee~vdeL 130 (1460)
. .++.++..+++.+.+..+
T Consensus 104 ~~~~~~i~~~~l~~~~~~~i 123 (301)
T 2b30_A 104 DQIGYTLLDETIETDVYAEL 123 (301)
T ss_dssp CTTCCEEEECCCCHHHHHHH
T ss_pred eCCCCEEEEccCCHHHHHHH
Confidence 7 677788889988766665
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-08 Score=113.39 Aligned_cols=95 Identities=19% Similarity=0.321 Sum_probs=74.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cc--cceeEccCCcccc--c
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IE--GLTYAGNHGLEII--H 112 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~--~~~~ig~hGaei~--~ 112 (1460)
+++||+||||++ +...++++++++|++++++ |+.++++|||+...+...+. +. ...++++||+.+. .
T Consensus 7 li~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 80 (279)
T 4dw8_A 7 LIVLDLDGTLTN-----SKKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWE 80 (279)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETT
T ss_pred EEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECC
Confidence 799999999997 3457999999999999999 99999999999888766553 22 2457899999998 4
Q ss_pred CCCCccccCCCccchhhhhhHHHhhccCce
Q psy775 113 PDGSRFVHPIPTEFEDKVSDLLKTLQEKVM 142 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL~ii~~L~q~~~~ 142 (1460)
.++.++..+++.+.+.++ +..+.++++.
T Consensus 81 ~~~~~~~~~l~~~~~~~i--~~~~~~~~~~ 108 (279)
T 4dw8_A 81 SKEMMYENVLPNEVVPVL--YECARTNHLS 108 (279)
T ss_dssp TCCEEEECCCCGGGHHHH--HHHHHHTTCE
T ss_pred CCeEEEEecCCHHHHHHH--HHHHHHcCCE
Confidence 667778888988876665 3344444433
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-08 Score=114.27 Aligned_cols=87 Identities=22% Similarity=0.264 Sum_probs=68.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc------ccceeEccCCccc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI------EGLTYAGNHGLEI 110 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~------~~~~~ig~hGaei 110 (1460)
..-++|+|+||||++. +..++++++++|++|+++ +.++|||||++..+.+.++. ....++++||+.+
T Consensus 12 ~~kli~~DlDGTLl~~-----~~~is~~~~~al~~l~~~--i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i 84 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPA-----RQKIDPEVAAFLQKLRSR--VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQ 84 (262)
T ss_dssp -CEEEEEESBTTTBST-----TSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEE
T ss_pred CeEEEEEeCccCCCCC-----CCcCCHHHHHHHHHHHhC--CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEE
Confidence 3458999999999972 356899999999999877 89999999998888776653 1235789999999
Q ss_pred ccCCCCccccC----CCccchhhh
Q psy775 111 IHPDGSRFVHP----IPTEFEDKV 130 (1460)
Q Consensus 111 ~~~g~~i~~~p----I~ee~vdeL 130 (1460)
...|+.++..+ ++.+.+..+
T Consensus 85 ~~~~~~i~~~~~~~~l~~~~~~~i 108 (262)
T 2fue_A 85 YKHGRLLSKQTIQNHLGEELLQDL 108 (262)
T ss_dssp EETTEECCCCCHHHHHCHHHHHHH
T ss_pred EeCCeEEEEeeccccCCHHHHHHH
Confidence 88777777776 456555544
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-08 Score=112.94 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=75.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccccc-CCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIH-PDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~-~g~~ 116 (1460)
+++||+||||++ +...++++++++|++++++ |+.++++|||+...+...+...+ ..++++||+.+.. .++.
T Consensus 8 li~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 81 (290)
T 3dnp_A 8 LLALNIDGALLR-----SNGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAP 81 (290)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSC
T ss_pred EEEEcCCCCCCC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCE
Confidence 799999999997 3456999999999999999 99999999999888765553222 1578999999974 4566
Q ss_pred ccccCCCccchhhhhhHHHhhccCceeeecC
Q psy775 117 RFVHPIPTEFEDKVSDLLKTLQEKVMSVHID 147 (1460)
Q Consensus 117 i~~~pI~ee~vdeL~ii~~L~q~~~~pVfLd 147 (1460)
++..+++.+.+..+ +..+.++++.....+
T Consensus 82 ~~~~~l~~~~~~~i--~~~~~~~~~~~~~~~ 110 (290)
T 3dnp_A 82 FFEKRISDDHTFNI--VQVLESYQCNIRLLH 110 (290)
T ss_dssp SEECCCCHHHHHHH--HHHHHTSSCEEEEEC
T ss_pred EEecCCCHHHHHHH--HHHHHHcCceEEEEE
Confidence 77888887765555 444555555444433
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.5e-08 Score=112.30 Aligned_cols=85 Identities=19% Similarity=0.273 Sum_probs=68.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cccceeEccCCcccccCCCCcc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IEGLTYAGNHGLEIIHPDGSRF 118 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~~~~~ig~hGaei~~~g~~i~ 118 (1460)
++|||+||||++. ...++++++++|++++++ |+.++++|||+...+...+. +....++++||+.+...++.++
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~ 78 (258)
T 2pq0_A 5 IVFFDIDGTLLDE-----QKQLPLSTIEAVRRLKQS-GVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLY 78 (258)
T ss_dssp EEEECTBTTTBCT-----TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEE
T ss_pred EEEEeCCCCCcCC-----CCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEE
Confidence 7999999999973 345899999999999999 99999999999877655442 1112367999999988777778
Q ss_pred ccCCCccchhhh
Q psy775 119 VHPIPTEFEDKV 130 (1460)
Q Consensus 119 ~~pI~ee~vdeL 130 (1460)
..+++.+.+..+
T Consensus 79 ~~~~~~~~~~~i 90 (258)
T 2pq0_A 79 KQPLRREKVRAL 90 (258)
T ss_dssp ECCCCHHHHHHH
T ss_pred EecCCHHHHHHH
Confidence 888888766655
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.69 E-value=1.2e-08 Score=113.56 Aligned_cols=84 Identities=23% Similarity=0.322 Sum_probs=67.4
Q ss_pred EEEEecCCCcCCCCCCCCCcc-CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cc----cceeEccCCcccccC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAV-LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IE----GLTYAGNHGLEIIHP 113 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~-ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~----~~~~ig~hGaei~~~ 113 (1460)
++|||+||||++. +.. +++.++++|++|+++ |+.++++|||+ ..+...+. +. ...++++||+.+...
T Consensus 4 li~~DlDGTLl~~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 76 (261)
T 2rbk_A 4 ALFFDIDGTLVSF-----ETHRIPSSTIEALEAAHAK-GLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVG 76 (261)
T ss_dssp EEEECSBTTTBCT-----TTSSCCHHHHHHHHHHHHT-TCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEET
T ss_pred EEEEeCCCCCcCC-----CCCcCCHHHHHHHHHHHHC-CCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEEC
Confidence 7899999999973 234 899999999999999 99999999999 87755442 11 235789999999876
Q ss_pred CCCccccCCCccchhhh
Q psy775 114 DGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 114 g~~i~~~pI~ee~vdeL 130 (1460)
++.++..+++.+.+..+
T Consensus 77 ~~~i~~~~l~~~~~~~i 93 (261)
T 2rbk_A 77 EEVIYKSAIPQEEVKAM 93 (261)
T ss_dssp TEEEEECCCCHHHHHHH
T ss_pred CEEEEecCCCHHHHHHH
Confidence 77778888888766655
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-08 Score=114.44 Aligned_cols=89 Identities=19% Similarity=0.233 Sum_probs=69.3
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccccc-
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIH- 112 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~- 112 (1460)
...-+++||+||||++ +...++++++++|++++++ |+.++++|||+...+...+..-+ ..++++||+.+..
T Consensus 19 ~~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~ 92 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLS-----PDHFLTPYAKETLKLLTAR-GINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDS 92 (285)
T ss_dssp --CCEEEEECCCCCSC-----TTSCCCHHHHHHHHHHHTT-TCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECT
T ss_pred CcceEEEEeCcCCCCC-----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECC
Confidence 3444899999999997 3457999999999999999 99999999999888776653222 3468999999984
Q ss_pred CCCCccccCCCccchhhh
Q psy775 113 PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL 130 (1460)
.++.++..+++.+.+..+
T Consensus 93 ~~~~l~~~~l~~~~~~~i 110 (285)
T 3pgv_A 93 DGQQIFAHNLDRDIAADL 110 (285)
T ss_dssp TSCEEEECCCCHHHHHHH
T ss_pred CCCEEEecCCCHHHHHHH
Confidence 556677788887655544
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.8e-08 Score=118.83 Aligned_cols=146 Identities=11% Similarity=-0.010 Sum_probs=97.8
Q ss_pred EEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCC--CCCCccE
Q psy775 742 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFT--TPNWSPI 819 (1460)
Q Consensus 742 kiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~--~~~~~pv 819 (1460)
++++++++. .||+..+++||.++.+++|++ .|+.+|.+ ++. .+++++++.+.+-.+. ..+. ..
T Consensus 197 ~vi~~~~~~--~k~~~~ll~A~~~l~~~~p~~----~lvivG~g-----~~~---~~~l~~~~~~~gl~~~~~~~~~-~~ 261 (374)
T 2xci_A 197 EFIVAGSIH--TGEVEIILKAFKEIKKTYSSL----KLILVPRH-----IEN---AKIFEKKARDFGFKTSFFENLE-GD 261 (374)
T ss_dssp CEEEEEEEC--GGGHHHHHHHHHHHHTTCTTC----EEEEEESS-----GGG---HHHHHHHHHHTTCCEEETTCCC-SS
T ss_pred CEEEEEeCC--CchHHHHHHHHHHHHhhCCCc----EEEEECCC-----HHH---HHHHHHHHHHCCCceEEecCCC-Cc
Confidence 567777763 589999999999999899986 46666632 222 1234455554432211 0000 22
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECC-CccCCCccceeeeeeccCCCCceEEEc-CCCCcchhhhhhhhcCcccchhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTP-LRDGMNLVAKEFVACQINEPPGVLIVS-PFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtS-lrEGmnLva~EymAc~~~~~~g~lIlS-e~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+++.+. .+|+..+|+.||+++++| ..|++|++++||||| +.|+|++ ...|+.++. +
T Consensus 262 v~~~~~--~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~-----G~PVI~~~~~~~~~e~~---------------~ 319 (374)
T 2xci_A 262 VILVDR--FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCW-----GIPVIYGPYTHKVNDLK---------------E 319 (374)
T ss_dssp EEECCS--SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTT-----TCCEEECSCCTTSHHHH---------------H
T ss_pred EEEECC--HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHh-----CCCEEECCCccChHHHH---------------H
Confidence 555554 368999999999988876 457789999999999 7788876 445555411 1
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM 961 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m 961 (1460)
.+ ..++.++.|.|++++|++|.+.|+.
T Consensus 320 ~~-------------------------------------~~~G~l~~~~d~~~La~ai~~ll~d 346 (374)
T 2xci_A 320 FL-------------------------------------EKEGAGFEVKNETELVTKLTELLSV 346 (374)
T ss_dssp HH-------------------------------------HHTTCEEECCSHHHHHHHHHHHHHS
T ss_pred HH-------------------------------------HHCCCEEEeCCHHHHHHHHHHHHhH
Confidence 00 0123567788999999999999985
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.65 E-value=3.9e-08 Score=111.24 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=68.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccccc-CCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIH-PDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~-~g~~ 116 (1460)
+++||+||||++. +..+++.++++|++++++ |+.++++|||+...+...+..-+ ..++++||+.+.. .++.
T Consensus 6 li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 79 (288)
T 1nrw_A 6 LIAIDLDGTLLNS-----KHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 79 (288)
T ss_dssp EEEEECCCCCSCT-----TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred EEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcE
Confidence 7999999999973 346899999999999998 99999999999888766653212 2478999999887 5667
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 80 ~~~~~~~~~~~~~i 93 (288)
T 1nrw_A 80 YHHETIDKKRAYDI 93 (288)
T ss_dssp EEECCCCHHHHHHH
T ss_pred EEEeeCCHHHHHHH
Confidence 77888887665555
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.9e-06 Score=102.56 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=71.7
Q ss_pred CEEEEEEcCccc-cCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 741 QKIVLGVDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 741 kkiIl~VdRLd~-~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
+.+++...|... -||+...++|++++.+++|++ .++..+.+. + .+++.+++.. +. . +-
T Consensus 231 ~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~----~~v~~~g~~----~---~~~~~l~~~~---~~------~-~~ 289 (396)
T 3dzc_A 231 KLILVTGHRRESFGGGFERICQALITTAEQHPEC----QILYPVHLN----P---NVREPVNKLL---KG------V-SN 289 (396)
T ss_dssp EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTE----EEEEECCBC----H---HHHHHHHHHT---TT------C-TT
T ss_pred CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCc----eEEEEeCCC----h---HHHHHHHHHH---cC------C-CC
Confidence 445556778653 488999999999999999974 333322221 2 2344444331 11 1 22
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEc-CCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS-PFAG 876 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlS-e~aG 876 (1460)
+.+.+++.+.++..+|+.||++|.+| | |+. .|+++| +.|+|++ +.++
T Consensus 290 v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~-----G~PvV~~~~~~~ 337 (396)
T 3dzc_A 290 IVLIEPQQYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSL-----GKPVLVMRETTE 337 (396)
T ss_dssp EEEECCCCHHHHHHHHHHCSEEEESC---S-GGG-TTGGGG-----TCCEEECCSSCS
T ss_pred EEEeCCCCHHHHHHHHHhcCEEEECC---c-cHH-HHHHHc-----CCCEEEccCCCc
Confidence 55667889999999999999999999 6 655 999999 6788887 4444
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-08 Score=111.35 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=64.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cc--cceeEccCCcccc--c
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IE--GLTYAGNHGLEII--H 112 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~--~~~~ig~hGaei~--~ 112 (1460)
+++||+||||++ +...++++++++|++++++ |+.++++|||+...+...+. +. ...++++||+ +. .
T Consensus 7 li~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~~ 79 (279)
T 3mpo_A 7 LIAIDIDGTLLN-----EKNELAQATIDAVQAAKAQ-GIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQTI 79 (279)
T ss_dssp EEEECC----------------CHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEET
T ss_pred EEEEcCcCCCCC-----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEECC
Confidence 799999999997 3456899999999999999 99999999999888766553 32 2358899999 55 4
Q ss_pred CCCCccccCCCccchhhhhhHHHhhccCceeee
Q psy775 113 PDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVH 145 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL~ii~~L~q~~~~pVf 145 (1460)
.++.++..+++.+.+..+ +..+.++++....
T Consensus 80 ~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~ 110 (279)
T 3mpo_A 80 SGKVLTNHSLTYEDYIDL--EAWARKVRAHFQI 110 (279)
T ss_dssp TSCEEEECCCCHHHHHHH--HHHHHHTTCCEEE
T ss_pred CCCEEEecCCCHHHHHHH--HHHHHHcCCeEEE
Confidence 456677788888766555 3444455544333
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.5e-08 Score=112.49 Aligned_cols=85 Identities=21% Similarity=0.244 Sum_probs=70.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChh-HHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEE-TKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s-~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g~~ 116 (1460)
+++||+||||++ +...++++ ++++|++++++ |+.++++|||+...+...+..-+ ..++++||+.+...++.
T Consensus 39 li~fDlDGTLld-----~~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 112 (304)
T 3l7y_A 39 VIATDMDGTFLN-----SKGSYDHNRFQRILKQLQER-DIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQS 112 (304)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEE
T ss_pred EEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEE
Confidence 799999999997 33457888 89999999999 99999999999988877664322 47899999999887777
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 113 i~~~~l~~~~~~~i 126 (304)
T 3l7y_A 113 LIEVFQQREDIASI 126 (304)
T ss_dssp EEECCCCHHHHHHH
T ss_pred EEEecCCHHHHHHH
Confidence 88888888765555
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.61 E-value=4.5e-08 Score=110.47 Aligned_cols=87 Identities=21% Similarity=0.269 Sum_probs=66.3
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccCC
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHPD 114 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~g 114 (1460)
.-++|+|+||||++. ...++++++++|++|+++ |+.++|||||+...+...+ ++....++++||+.+..++
T Consensus 9 ~~li~~DlDGTLl~~-----~~~~~~~~~~~l~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~ 82 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDS-----HSYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE 82 (275)
T ss_dssp CEEEEEECTTTTSCS-----SCCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred ceEEEEeCCCCCCCC-----CCcCCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecC
Confidence 358999999999973 234678899999999998 9999999999988876655 3333258899999997332
Q ss_pred --C-----CccccCCCccchhhh
Q psy775 115 --G-----SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 115 --~-----~i~~~pI~ee~vdeL 130 (1460)
+ .++..+++.+.+..+
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 83 QWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp TCTTSTTTTEEECSSCHHHHHHH
T ss_pred cccccCceEEEecCCCHHHHHHH
Confidence 2 346778887665554
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.7e-08 Score=108.66 Aligned_cols=83 Identities=17% Similarity=0.128 Sum_probs=63.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccC----
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHP---- 113 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~---- 113 (1460)
++|||+||||+ .. ..+ ++++++|++|+++ |+.++|+|||+...+...+..-+ ..++++||+.+...
T Consensus 4 li~~DlDGTLl--~~----~~~-~~~~~~l~~l~~~-g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 75 (249)
T 2zos_A 4 LIFLDIDKTLI--PG----YEP-DPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (249)
T ss_dssp EEEECCSTTTC--TT----SCS-GGGHHHHHHHHHT-TEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCC
T ss_pred EEEEeCCCCcc--CC----CCc-HHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcc
Confidence 78999999999 22 123 4599999999999 99999999999888766553211 25889999999865
Q ss_pred ----------CCCccccCCCccchhhh
Q psy775 114 ----------DGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 114 ----------g~~i~~~pI~ee~vdeL 130 (1460)
++.++..+++.+.+..+
T Consensus 76 ~~~~~~~~~~~~~i~~~~l~~~~~~~i 102 (249)
T 2zos_A 76 PFDVKGKEVGNYIVIELGIRVEKIREE 102 (249)
T ss_dssp C------CCCCCCEEECSCCHHHHHHH
T ss_pred cccccccccCceEEEecCCCHHHHHHH
Confidence 45666777877655544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.4e-08 Score=107.77 Aligned_cols=76 Identities=18% Similarity=0.332 Sum_probs=61.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCccccc-CCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIH-PDG 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~-~g~ 115 (1460)
++|+|+||||++. ...++++++++|++|+++ |+.++++|||+...+...+ ++.. .++++||+.+.. .++
T Consensus 7 li~~DlDGTLl~~-----~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~~~~ 79 (227)
T 1l6r_A 7 LAAIDVDGNLTDR-----DRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGING-PVFGENGGIMFDNDGS 79 (227)
T ss_dssp EEEEEHHHHSBCT-----TSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCS-CEEEGGGTEEECTTSC
T ss_pred EEEEECCCCCcCC-----CCcCCHHHHHHHHHHHHC-CCEEEEECCCCcHHHHHHHHHhCCCC-eEEEeCCcEEEeCCCC
Confidence 7999999999973 346899999999999998 9999999999988876655 3332 378999999986 555
Q ss_pred Cc-cccCC
Q psy775 116 SR-FVHPI 122 (1460)
Q Consensus 116 ~i-~~~pI 122 (1460)
.+ +..++
T Consensus 80 ~i~~~~~l 87 (227)
T 1l6r_A 80 IKKFFSNE 87 (227)
T ss_dssp EEESSCSH
T ss_pred EEEEeccH
Confidence 55 65655
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-07 Score=103.52 Aligned_cols=76 Identities=20% Similarity=0.340 Sum_probs=61.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccCCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHPDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~g~~ 116 (1460)
+++||+||||++. ...++++++++|++++++ |+.++++|||+...+.+.. ++.. .++++||+.+...++.
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~v~i~TGR~~~~~~~~~~~l~~~~-~~i~~nGa~i~~~~~~ 77 (231)
T 1wr8_A 5 AISIDIDGTITYP-----NRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILIGTSG-PVVAEDGGAISYKKKR 77 (231)
T ss_dssp EEEEESTTTTBCT-----TSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHHTCCS-CEEEGGGTEEEETTEE
T ss_pred EEEEECCCCCCCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHcCCCC-eEEEeCCcEEEeCCEE
Confidence 7899999999973 346899999999999999 9999999999987766554 3332 3789999988776656
Q ss_pred ccccCC
Q psy775 117 RFVHPI 122 (1460)
Q Consensus 117 i~~~pI 122 (1460)
++..++
T Consensus 78 ~~~~~l 83 (231)
T 1wr8_A 78 IFLASM 83 (231)
T ss_dssp EESCCC
T ss_pred EEeccH
Confidence 666666
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.8e-07 Score=104.16 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=64.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCC----
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDG---- 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~---- 115 (1460)
++|||+||||++. . .++++++++|++++++ |++++++|||+...+. .+++. ..+++.||+.+...++
T Consensus 2 li~~DlDGTLl~~-----~-~i~~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~-~l~~~-~~~i~~nGa~i~~~~~~~~~ 72 (259)
T 3zx4_A 2 IVFTDLDGTLLDE-----R-GELGPAREALERLRAL-GVPVVPVTAKTRKEVE-ALGLE-PPFIVENGGGLYLPRDWPVR 72 (259)
T ss_dssp EEEECCCCCCSCS-----S-SSCSTTHHHHHHHHHT-TCCEEEBCSSCHHHHH-HTTCC-SSEEEGGGTEEEEETTCSSC
T ss_pred EEEEeCCCCCcCC-----C-cCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHH-HcCCC-CcEEEECCcEEEeCCCCccc
Confidence 7899999999973 3 6899999999999999 9999999999998887 45443 3478999999887654
Q ss_pred --------CccccCCCccchhhh
Q psy775 116 --------SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 116 --------~i~~~pI~ee~vdeL 130 (1460)
.++..+++.+.+..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~ 95 (259)
T 3zx4_A 73 AGRPKGGYRVVSLAWPYRKVRAR 95 (259)
T ss_dssp CSEEETTEEEEECSCCHHHHHHH
T ss_pred ccccCCceEEEEcCCCHHHHHHH
Confidence 245566666544443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.36 E-value=8.1e-06 Score=97.41 Aligned_cols=139 Identities=12% Similarity=0.125 Sum_probs=93.9
Q ss_pred CCEEEEEEcCccc-cCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~-~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
++.+++.++|... -|++...++|+.++.+++|++ .++..+.+. + .+++.+++.. +.. +
T Consensus 224 ~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~----~~v~~~~~~----~---~~~~~l~~~~---~~~-------~ 282 (403)
T 3ot5_A 224 NRLILMTAHRRENLGEPMQGMFEAVREIVESREDT----ELVYPMHLN----P---AVREKAMAIL---GGH-------E 282 (403)
T ss_dssp CEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTE----EEEEECCSC----H---HHHHHHHHHH---TTC-------T
T ss_pred CCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCc----eEEEecCCC----H---HHHHHHHHHh---CCC-------C
Confidence 3456777889765 378999999999999999974 333332221 1 2334444322 111 1
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CCCcchhhhhhhhcCcccchhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
-+.+.+++.+.++..+|+.||++|.+| . | +..|+++| +.|+|++. .++..+ +++
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~vv~~S--G--g-~~~EA~a~-----g~PvV~~~~~~~~~e---------------~v~ 337 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYLVFTDS--G--G-VQEEAPGM-----GVPVLVLRDTTERPE---------------GIE 337 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEEEEECC--H--H-HHHHGGGT-----TCCEEECCSSCSCHH---------------HHH
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC--c--c-HHHHHHHh-----CCCEEEecCCCcchh---------------hee
Confidence 255678999999999999999999888 2 3 33999999 67888874 333222 111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
+ ..+++|.+ |.++++++|.++|+.+..
T Consensus 338 ~---------------------------------------g~~~lv~~-d~~~l~~ai~~ll~~~~~ 364 (403)
T 3ot5_A 338 A---------------------------------------GTLKLIGT-NKENLIKEALDLLDNKES 364 (403)
T ss_dssp H---------------------------------------TSEEECCS-CHHHHHHHHHHHHHCHHH
T ss_pred C---------------------------------------CcEEEcCC-CHHHHHHHHHHHHcCHHH
Confidence 0 23577876 999999999999986543
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.6e-05 Score=93.02 Aligned_cols=212 Identities=12% Similarity=0.046 Sum_probs=125.4
Q ss_pred CCCCEEEEeCcchh--HHHHHHHhhhhccCCCceEEEEEecCCCCccc--cccCCCcHHHHhhhccCceeeeccHHhHHH
Q psy775 210 SGTPLVWIHDYHLM--LAANTIRNIADEQNLKFKLGFFLHIPFPPWDI--FRLFPWSDEILQGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 210 ~~gDvVwIHDYhL~--llP~~LR~~~p~~~~~~~IgfFlHiPFPs~ei--fr~LP~r~eil~gLL~aDlIgF~t~~yar~ 285 (1460)
.++|+|.+|=..+. ..+..+-+++. ..++++.++.|==||-.-. ...++.-..+ +-.||.|..+++...+.
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk--~~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~---y~~aD~Ii~~S~~~~~~ 147 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLK--LYDIKIVLFIHDVVPLMFSGNFYLMDRTIAY---YNKADVVVAPSQKMIDK 147 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHT--TSSCEEEEEESCCHHHHCGGGGGGHHHHHHH---HTTCSEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHH--hcCCEEEEEecccHHhhCccchhhHHHHHHH---HHHCCEEEECCHHHHHH
Confidence 36899999755542 23333333332 1278999999965542210 0001111223 34599999999877666
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeeccc-CchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAI-PYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFE 364 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGI-D~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~ 364 (1460)
+.+ .|.. ..++. +.++ |... +. . .. ...++++|+|+||+....++. ++
T Consensus 148 l~~-----~G~~-------------~~ki~--~~~~~~~~~--~~--~-~~-~~~~~~~i~yaG~l~k~~~L~----~l- 196 (339)
T 3rhz_A 148 LRD-----FGMN-------------VSKTV--VQGMWDHPT--QA--P-MF-PAGLKREIHFPGNPERFSFVK----EW- 196 (339)
T ss_dssp HHH-----TTCC-------------CSEEE--ECCSCCCCC--CC--C-CC-CCEEEEEEEECSCTTTCGGGG----GC-
T ss_pred HHH-----cCCC-------------cCcee--ecCCCCccC--cc--c-cc-ccCCCcEEEEeCCcchhhHHH----hC-
Confidence 554 1321 01221 2222 2110 00 0 00 113457899999998532221 11
Q ss_pred HHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEc
Q psy775 365 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 444 (1460)
Q Consensus 365 ~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vvp 444 (1460)
.|++ .|+.+|.+... + .. .|.| .|.+|.+|++.+|+.||+.++.
T Consensus 197 -----~~~~----~f~ivG~G~~~---------------------~---l~--nV~f-~G~~~~~el~~~l~~~~~~lv~ 240 (339)
T 3rhz_A 197 -----KYDI----PLKVYTWQNVE---------------------L---PQ--NVHK-INYRPDEQLLMEMSQGGFGLVW 240 (339)
T ss_dssp -----CCSS----CEEEEESCCCC---------------------C---CT--TEEE-EECCCHHHHHHHHHTEEEEECC
T ss_pred -----CCCC----eEEEEeCCccc---------------------C---cC--CEEE-eCCCCHHHHHHHHHhCCEEEEE
Confidence 3554 46667754311 0 11 3444 5999999999999999999987
Q ss_pred cCCCC---------CCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHH
Q psy775 445 PLRDG---------MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRA 502 (1460)
Q Consensus 445 SlrEG---------fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~a 502 (1460)
.+| ++.-..||||| |.|+|++..++.++.+.+ |+.++ +.++++++|..+
T Consensus 241 --~~~~~~~y~~~~~P~Kl~eymA~-----G~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l 301 (339)
T 3rhz_A 241 --MDDKDKEYQSLYCSYKLGSFLAA-----GIPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV 301 (339)
T ss_dssp --CCGGGHHHHTTCCCHHHHHHHHH-----TCCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC
T ss_pred --CCCchhHHHHhcChHHHHHHHHc-----CCCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh
Confidence 333 35568999999 677799998888877743 78886 588999999874
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.7e-05 Score=92.57 Aligned_cols=237 Identities=11% Similarity=0.013 Sum_probs=133.9
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhc--cCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML--GCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL--~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|+.--..++ .+..+. .+++|+ ..+.+..+.+. ++.+++.+-+. .+|++-..+..+.++|.+
T Consensus 94 kPD~Vlv~gd~~~~~a-alaA~~----~~IPv~-h~eaglrs~~~----~~pee~nR~~~~~~a~~~~~~te~~~~~l~~ 163 (385)
T 4hwg_A 94 KPDAVLFYGDTNSCLS-AIAAKR----RKIPIF-HMEAGNRCFDQ----RVPEEINRKIIDHISDVNITLTEHARRYLIA 163 (385)
T ss_dssp CCSEEEEESCSGGGGG-HHHHHH----TTCCEE-EESCCCCCSCT----TSTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCcEEEEECCchHHHH-HHHHHH----hCCCEE-EEeCCCccccc----cCcHHHHHHHHHhhhceeecCCHHHHHHHHH
Confidence 4799999986544444 333221 256764 33444433221 23344444432 388888888888888876
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEee-cccCchhhhh-hhccchhhhc-----cCCeEEEEecCcc---ccCCHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLP-IAIPYERFVQ-LAQAAPRVID-----TKQKIVLGVDRLD---YTKGLVH 358 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viP-iGID~~~f~~-~~~~~~~~~~-----~~~kvIL~VgRLd---~~KGI~~ 358 (1460)
.|... -+|.++. .++|.-.+.. .... ..+++ .++.+++..+|.+ ..|++..
T Consensus 164 -----~G~~~-------------~~I~vtGnp~~D~~~~~~~~~~~-~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ 224 (385)
T 4hwg_A 164 -----EGLPA-------------ELTFKSGSHMPEVLDRFMPKILK-SDILDKLSLTPKQYFLISSHREENVDVKNNLKE 224 (385)
T ss_dssp -----TTCCG-------------GGEEECCCSHHHHHHHHHHHHHH-CCHHHHTTCCTTSEEEEEECCC-----CHHHHH
T ss_pred -----cCCCc-------------CcEEEECCchHHHHHHhhhhcch-hHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHH
Confidence 23221 1222332 3556433321 1111 11111 2345666788854 4478999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+++|+.++.+++ ++ .++.... + .+++.+++.. +- .+ ....| ++.+.++..++..+|+.|
T Consensus 225 ll~al~~l~~~~-~~----~vv~p~~------p---~~~~~l~~~~---~~-~~--~~~~v-~l~~~lg~~~~~~l~~~a 283 (385)
T 4hwg_A 225 LLNSLQMLIKEY-NF----LIIFSTH------P---RTKKRLEDLE---GF-KE--LGDKI-RFLPAFSFTDYVKLQMNA 283 (385)
T ss_dssp HHHHHHHHHHHH-CC----EEEEEEC------H---HHHHHHHTSG---GG-GG--TGGGE-EECCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC-Ce----EEEEECC------h---HHHHHHHHHH---HH-hc--CCCCE-EEEcCCCHHHHHHHHHhC
Confidence 999999998766 44 2222221 2 2333333210 10 00 11234 456889999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCC-Cchhcc--cccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQM--HEALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~a-Gaa~~L--~~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
|+++..| |.+..||++++ .|+|+.... +-.+.+ +.+++|.+ |.+++++++.++|+++..
T Consensus 284 dlvvt~S-----Ggv~~EA~alG-----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 284 FCILSDS-----GTITEEASILN-----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEHDN 345 (385)
T ss_dssp SEEEECC-----TTHHHHHHHTT-----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTCBT
T ss_pred cEEEECC-----ccHHHHHHHcC-----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhChHH
Confidence 9999888 44679999994 444554332 223334 23677765 999999999999987643
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.11 E-value=3.1e-06 Score=87.29 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=38.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
++|||+||||+... .+....+.+++++||++|+++ |+.++|+|||+.
T Consensus 5 ~i~~DlDGTL~~~~-~~~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~ 51 (142)
T 2obb_A 5 TIAVDFDGTIVEHR-YPRIGEEIPFAVETLKLLQQE-KHRLILWSVREG 51 (142)
T ss_dssp EEEECCBTTTBCSC-TTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCH
T ss_pred EEEEECcCCCCCCC-CccccccCHHHHHHHHHHHHC-CCEEEEEeCCCc
Confidence 79999999999842 122223567999999999999 999999999984
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=2e-06 Score=95.26 Aligned_cols=66 Identities=23% Similarity=0.223 Sum_probs=51.2
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cc-cceeEccCCccccc
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IE-GLTYAGNHGLEIIH 112 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~-~~~~ig~hGaei~~ 112 (1460)
.++|+|+||||++. ... .+.++++|++++ + |+.++++|||++..+...+. +. ...++++||+.+..
T Consensus 4 ~li~~DlDGTLl~~-----~~~-~~~~~~~l~~~~-~-gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~ 73 (244)
T 1s2o_A 4 LLLISDLDNTWVGD-----QQA-LEHLQEYLGDRR-G-NFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYH 73 (244)
T ss_dssp EEEEECTBTTTBSC-----HHH-HHHHHHHHHTTG-G-GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcCC-----HHH-HHHHHHHHHHhc-C-CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEe
Confidence 48999999999973 122 367889999866 5 79999999999888766543 33 24688999999876
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.77 E-value=6.4e-05 Score=93.71 Aligned_cols=149 Identities=9% Similarity=-0.048 Sum_probs=95.0
Q ss_pred CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
..++.+..| ..|..+..+++|.+++++.|+. +.++... +. ..+... .+.++..+ ..+..+ +
T Consensus 441 ~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~s---~L~l~~~-g~-~~g~~~-~~~~~~~~--~GI~~R---------v 501 (631)
T 3q3e_A 441 VVNIGIAST--TMKLNPYFLEALKAIRDRAKVK---VHFHFAL-GQ-SNGITH-PYVERFIK--SYLGDS---------A 501 (631)
T ss_dssp EEEEEEEEC--STTCCHHHHHHHHHHHHHCSSE---EEEEEEE-SS-CCGGGH-HHHHHHHH--HHHGGG---------E
T ss_pred eEEEEECCc--cccCCHHHHHHHHHHHHhCCCc---EEEEEec-CC-CchhhH-HHHHHHHH--cCCCcc---------E
Confidence 445566777 4799999999999999999974 2222222 21 112221 22233222 123222 3
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-------c--cEEECCCC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-------E--ALICNPYE 491 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-------~--allVNP~D 491 (1460)
.|.|.++.++..++|+.|||++.|+-+.| |++++|||+| |.|+|...-.+.+.-++ | ..+|- .|
T Consensus 502 ~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm-----GVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-~d 574 (631)
T 3q3e_A 502 TAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL-----GLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-NT 574 (631)
T ss_dssp EEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT-----TCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-SS
T ss_pred EEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc-----CCCEEeccCCcHHHHhHHHHHHhcCCCcceec-CC
Confidence 46799999999999999999999998877 9999999999 44445533322222221 1 21232 37
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHH
Q psy775 492 IDAAAEVIHRALTMPEDERTLRMN 515 (1460)
Q Consensus 492 ~~elA~AI~~aL~m~~~er~~R~~ 515 (1460)
.++.+++..++.++++..++.|.+
T Consensus 575 ~eeYv~~Av~La~D~~~l~~LR~~ 598 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQERLELRRY 598 (631)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 889988888888876665555433
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00071 Score=79.20 Aligned_cols=130 Identities=14% Similarity=0.117 Sum_probs=81.5
Q ss_pred CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccE
Q psy775 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419 (1460)
Q Consensus 340 ~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pI 419 (1460)
...+++++|++. .|+...+..+++.+ ++.+ + .++.++.+.. ..+ +++ . +. ..+
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~~-~----~~~~~~g~~~-~~~---~l~----~----~~--------~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGLD-A----DVLVASGPSL-DVS---GLG----E----VP--------ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTSS-S----EEEEECCSSC-CCT---TCC----C----CC--------TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcCC-C----EEEEEECCCC-Chh---hhc----c----CC--------CcE
Confidence 456778999996 66766666666555 3332 2 2333332211 010 010 0 00 123
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECCC--
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNPY-- 490 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP~-- 490 (1460)
.+.+.++ +..+|+.||++|.+| |. .+.+|||+| +.|+|+....+ .++.+ +.|++++|.
T Consensus 295 -~~~~~~~---~~~~l~~ad~~v~~~---g~-~t~~Ea~a~-----G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~ 361 (412)
T 3otg_A 295 -RLESWVP---QAALLPHVDLVVHHG---GS-GTTLGALGA-----GVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNI 361 (412)
T ss_dssp -EEESCCC---HHHHGGGCSEEEESC---CH-HHHHHHHHH-----TCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGC
T ss_pred -EEeCCCC---HHHHHhcCcEEEECC---ch-HHHHHHHHh-----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 4458775 667799999999876 32 588999999 55667755543 44444 238899887
Q ss_pred CHHHHHHHHHHHcCCCHHH
Q psy775 491 EIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 491 D~~elA~AI~~aL~m~~~e 509 (1460)
|+++++++|.++|+++...
T Consensus 362 ~~~~l~~ai~~ll~~~~~~ 380 (412)
T 3otg_A 362 SPDSVSGAAKRLLAEESYR 380 (412)
T ss_dssp CHHHHHHHHHHHHHCHHHH
T ss_pred CHHHHHHHHHHHHhCHHHH
Confidence 8999999999999875433
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.69 E-value=3.2e-05 Score=77.54 Aligned_cols=50 Identities=24% Similarity=0.356 Sum_probs=39.8
Q ss_pred EEEEecCCCcCCCCCCC-CCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPHP-DMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p-~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
++|||+||||++....+ ....+++.+.++|++|+++ |++++++|||+...
T Consensus 3 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARNMRT 53 (126)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTTTTT
T ss_pred EEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhC-CCeEEEEeCCChhh
Confidence 68999999999743210 0124778999999999999 99999999998643
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.69 E-value=3e-05 Score=85.59 Aligned_cols=55 Identities=25% Similarity=0.436 Sum_probs=50.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
++|+|+||||.+...+|+...+++..+++|++|.+. + .++++|||+...+..+++
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~ 57 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLP 57 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSC
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhc
Confidence 689999999999988888889999999999999987 4 899999999999998875
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00022 Score=89.07 Aligned_cols=114 Identities=9% Similarity=-0.107 Sum_probs=79.5
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
..++.+..|+ .|..+..+++|.++|++.|+. +.++...... .+... .+.+++.+ ..|..+ +
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~~--~g~~~-~~~~~~~~--~GI~~R---------v 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQS--NGITH-PYVERFIK--SYLGDS---------A 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESSC--CGGGH-HHHHHHHH--HHHGGG---------E
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCCC--chhhH-HHHHHHHH--cCCCcc---------E
Confidence 5667778885 688999999999999999973 3322222211 11111 22233221 223322 5
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
.|.|.++.++..++|+.||+++.|+.+.| |+++.|||+| |-|||...-.+.++
T Consensus 502 ~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm-----GVPVVTl~G~~~as 554 (631)
T 3q3e_A 502 TAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL-----GLVGVCKTGAEVHE 554 (631)
T ss_dssp EEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT-----TCCEEEECCSSHHH
T ss_pred EEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc-----CCCEEeccCCcHHH
Confidence 67899999999999999999999998877 9999999999 66777766555444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.52 E-value=3.7e-05 Score=85.22 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=40.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeC---Cchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTG---R~~~~l~~~l 95 (1460)
++|||+||||++- . .+.+++++||++|+++ |++++++|| |+...+.+.+
T Consensus 10 li~~DlDGTLl~~-----~-~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~r~~~~~~~~l 61 (268)
T 3qgm_A 10 GYIIDIDGVIGKS-----V-TPIPEGVEGVKKLKEL-GKKIIFVSNNSTRSRRILLERL 61 (268)
T ss_dssp EEEEECBTTTEET-----T-EECHHHHHHHHHHHHT-TCEEEEEECCSSSCHHHHHHHH
T ss_pred EEEEcCcCcEECC-----C-EeCcCHHHHHHHHHHc-CCeEEEEeCcCCCCHHHHHHHH
Confidence 7999999999962 1 2557899999999999 999999999 5666555444
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00052 Score=80.04 Aligned_cols=133 Identities=11% Similarity=0.036 Sum_probs=86.9
Q ss_pred CeEEEEecCccccCCH-HHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccE
Q psy775 341 QKIVLGVDRLDYTKGL-VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI-~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pI 419 (1460)
..++++.|++...|+. ..+++++.+. +++|+++ ++.++.+ .....+. .. -..
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~-----------~~-----~~~- 271 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT-----------DL-----PDN- 271 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT-----------TC-----CTT-
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc-----------cC-----CCC-
Confidence 4577788999887666 8888888888 8887653 4433321 1111111 00 012
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC----CCchhcc---cccEEECC---
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF----AGAGEQM---HEALICNP--- 489 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~----aGaa~~L---~~allVNP--- 489 (1460)
+.+.+.++..++ +..||++|.. |-..+..|||+| |.|+|+.-. .+.+..+ +.|++++|
T Consensus 272 v~~~~~~~~~~l---l~~ad~~v~~----~G~~t~~Ea~~~-----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 339 (391)
T 3tsa_A 272 ARIAESVPLNLF---LRTCELVICA----GGSGTAFTATRL-----GIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA 339 (391)
T ss_dssp EEECCSCCGGGT---GGGCSEEEEC----CCHHHHHHHHHT-----TCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH
T ss_pred EEEeccCCHHHH---HhhCCEEEeC----CCHHHHHHHHHh-----CCCEEecCCcccHHHHHHHHHHcCCEEecCcccc
Confidence 345688887665 5999999964 444578999999 455566433 2233333 23899998
Q ss_pred -CCHHHHHHHHHHHcCCCHHHHHH
Q psy775 490 -YEIDAAAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 490 -~D~~elA~AI~~aL~m~~~er~~ 512 (1460)
.|+++++++|.++|+++...+++
T Consensus 340 ~~~~~~l~~ai~~ll~~~~~~~~~ 363 (391)
T 3tsa_A 340 QSDHEQFTDSIATVLGDTGFAAAA 363 (391)
T ss_dssp HTCHHHHHHHHHHHHTCTHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCHHHHHHH
Confidence 78999999999999987654443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00044 Score=81.03 Aligned_cols=80 Identities=6% Similarity=-0.045 Sum_probs=52.6
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC----CCchhcc---cccEEECCC--
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF----AGAGEQM---HEALICNPY-- 490 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~----aGaa~~L---~~allVNP~-- 490 (1460)
+.+.++++.. .++..||++|. .|-+.+..|||+| |.|+|+.-. .+.++.+ +.|++++|.
T Consensus 286 v~~~~~~~~~---~ll~~ad~~v~----~gG~~t~~Ea~~~-----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VLAAGQFPLS---AIMPACDVVVH----HGGHGTTLTCLSE-----GVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EEEESCCCHH---HHGGGCSEEEE----CCCHHHHHHHHHT-----TCCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EEEeCcCCHH---HHHhhCCEEEe----cCCHHHHHHHHHh-----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 3445888755 45788999995 3446678999999 455677433 3444444 238889887
Q ss_pred CHHHHHHHHHHHcCCCHHHHH
Q psy775 491 EIDAAAEVIHRALTMPEDERT 511 (1460)
Q Consensus 491 D~~elA~AI~~aL~m~~~er~ 511 (1460)
|.++++++|.++|+++...++
T Consensus 354 ~~~~l~~ai~~ll~~~~~~~~ 374 (398)
T 4fzr_A 354 GVESVLAACARIRDDSSYVGN 374 (398)
T ss_dssp ---CHHHHHHHHHHCTHHHHH
T ss_pred CHHHHHHHHHHHHhCHHHHHH
Confidence 788999999999997765443
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00016 Score=81.28 Aligned_cols=67 Identities=19% Similarity=0.388 Sum_probs=50.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHH--------HHhcCCCceEEEEeCCchhhhhhhhc---cc--cceeEc
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQ--------KLANLPDVHISIISGRNVHNVMEMVG---IE--GLTYAG 104 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~--------~L~~~~g~~v~IvTGR~~~~l~~~l~---~~--~~~~ig 104 (1460)
.-+++||+||||++.. +++.+..++. .+++. |+.++++|||+...+...+. +. ...+++
T Consensus 22 ~kliifDlDGTLlds~-------i~~~~~~~l~~~~~~l~~~~~~~-g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~ 93 (289)
T 3gyg_A 22 QYIVFCDFDETYFPHT-------IDEQKQQDIYELEDYLEQKSKDG-ELIIGWVTGSSIESILDKMGRGKFRYFPHFIAS 93 (289)
T ss_dssp SEEEEEETBTTTBCSS-------CCHHHHHHHHHHHHHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEE
T ss_pred CeEEEEECCCCCcCCC-------CCcchHHHHHHHHHHHHHHHhcC-CcEEEEEcCCCHHHHHHHHHhhccCCCCCeEee
Confidence 3589999999999731 6788888888 44555 99999999999888766543 22 234678
Q ss_pred cCCccccc
Q psy775 105 NHGLEIIH 112 (1460)
Q Consensus 105 ~hGaei~~ 112 (1460)
++|.++..
T Consensus 94 ~~g~~i~~ 101 (289)
T 3gyg_A 94 DLGTEITY 101 (289)
T ss_dssp TTTTEEEE
T ss_pred cCCceEEE
Confidence 88887765
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.007 Score=71.81 Aligned_cols=102 Identities=11% Similarity=0.071 Sum_probs=65.6
Q ss_pred CCEEEEEEcCcc---ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH-hccCCCCC
Q psy775 740 KQKIVLGVDRLD---YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI-NGRFTTPN 815 (1460)
Q Consensus 740 ~kkiIl~VdRLd---~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I-N~~~~~~~ 815 (1460)
++.+++..+|.+ ..|++...++|++++.+++ ++ .+|.... + +.++.++ +. +. .+ .
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~----~vv~p~~------p---~~~~~l~----~~~~~-~~--~ 261 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NF----LIIFSTH------P---RTKKRLE----DLEGF-KE--L 261 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CC----EEEEEEC------H---HHHHHHH----TSGGG-GG--T
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-Ce----EEEEECC------h---HHHHHHH----HHHHH-hc--C
Confidence 456777888865 3478999999999988766 53 2222111 1 2233333 22 10 00 0
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 873 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe 873 (1460)
.+-+++.+++++.++..+|+.||+++..| |.+..|++++ +.|+|+..
T Consensus 262 -~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~al-----G~Pvv~~~ 308 (385)
T 4hwg_A 262 -GDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASIL-----NLPALNIR 308 (385)
T ss_dssp -GGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHT-----TCCEEECS
T ss_pred -CCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHc-----CCCEEEcC
Confidence 12256678889999999999999999877 3457999999 56667654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00016 Score=75.32 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=40.7
Q ss_pred EEEEecCCCcCCCC----CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 40 ALLLDYDGTLAPIA----PHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~----~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
++|||+||||+.-. .+++...+.|++.++|++|+++ |++++|+||++.
T Consensus 3 ~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 3 LIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSG 54 (179)
T ss_dssp EEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTT
T ss_pred EEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 68999999999642 2344567889999999999999 999999999873
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.29 E-value=9.8e-05 Score=81.81 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=39.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeC---Cchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTG---R~~~~l~~~l 95 (1460)
++|||+||||++- ..+.+++++||++|+++ |++++++|| |+...+.+.+
T Consensus 8 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r~~~~~~~~l 59 (266)
T 3pdw_A 8 GYLIDLDGTMYNG------TEKIEEACEFVRTLKDR-GVPYLFVTNNSSRTPKQVADKL 59 (266)
T ss_dssp EEEEECSSSTTCH------HHHHHHHHHHHHHHHHT-TCCEEEEESCCSSCHHHHHHHH
T ss_pred EEEEeCcCceEeC------CEeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHH
Confidence 7999999999862 23567899999999999 999999998 5555555444
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00034 Score=75.15 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=43.8
Q ss_pred EEEEecCCCcCCCCCCC--------CCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPHP--------DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p--------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
++|||+||||+++.... ....+-|++.++|+.|+++ |++++|+||++...+.....
T Consensus 8 av~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 8 ALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp CEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred EEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 79999999999843211 1235678999999999999 99999999998776655444
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00051 Score=75.65 Aligned_cols=54 Identities=30% Similarity=0.434 Sum_probs=46.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
+.-++++|+||||..- +..+++..+++|++|.+. +.+++.|||+...+.+.+++
T Consensus 5 ~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~--i~v~iaTGR~~~~~~~~l~~ 58 (246)
T 2amy_A 5 GPALCLFDVDGTLTAP-----RQKITKEMDDFLQKLRQK--IKIGVVGGSDFEKVQEQLGN 58 (246)
T ss_dssp CSEEEEEESBTTTBCT-----TSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHCT
T ss_pred CceEEEEECCCCcCCC-----CcccCHHHHHHHHHHHhC--CeEEEEcCCCHHHHHHHhcc
Confidence 3458999999999862 346899999999999887 69999999999999888875
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00018 Score=79.93 Aligned_cols=49 Identities=22% Similarity=0.419 Sum_probs=41.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+++||+||||++ ++..+ +++++||++++++ |++++++| ||+...+...+
T Consensus 7 li~~DlDGTLl~-----~~~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~~~~~~~~l 58 (264)
T 3epr_A 7 GYLIDLDGTIYK-----GKSRI-PAGERFIERLQEK-GIPYMLVTNNTTRTPESVQEML 58 (264)
T ss_dssp EEEECCBTTTEE-----TTEEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHH
T ss_pred EEEEeCCCceEe-----CCEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHH
Confidence 799999999997 33456 7999999999999 99999999 77777766555
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00078 Score=78.77 Aligned_cols=91 Identities=11% Similarity=-0.031 Sum_probs=65.6
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHh-CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~-~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
++++|+++||+....+ |++ .|+ +.|+.+|.+... +.+ .
T Consensus 177 ~~~~i~yaG~l~k~~~-----------L~~l~~~----~~f~ivG~G~~~---------------------~l~-----n 215 (339)
T 3rhz_A 177 LKREIHFPGNPERFSF-----------VKEWKYD----IPLKVYTWQNVE---------------------LPQ-----N 215 (339)
T ss_dssp EEEEEEECSCTTTCGG-----------GGGCCCS----SCEEEEESCCCC---------------------CCT-----T
T ss_pred CCcEEEEeCCcchhhH-----------HHhCCCC----CeEEEEeCCccc---------------------CcC-----C
Confidence 4678999999985322 222 355 457777765421 011 1
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccC---------CCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDG---------MNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEG---------mnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+.|.|.++.+|+.++|+.||+.++. .+| +....+||||| +.|+|+|..++.++
T Consensus 216 -V~f~G~~~~~el~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~-----G~PVI~~~~~~~~~ 277 (339)
T 3rhz_A 216 -VHKINYRPDEQLLMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA-----GIPVIVQEGIANQE 277 (339)
T ss_dssp -EEEEECCCHHHHHHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH-----TCCEEEETTCTTTH
T ss_pred -EEEeCCCCHHHHHHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHc-----CCCEEEccChhHHH
Confidence 5667999999999999999999997 333 34568999999 78999999887766
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00018 Score=75.81 Aligned_cols=56 Identities=18% Similarity=0.320 Sum_probs=43.0
Q ss_pred EEEEecCCCcCCCCCC-----CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPH-----PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~-----p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++.... .....+++.+.++|++|+++ |++++|+|||+...+...+.
T Consensus 10 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~ 70 (180)
T 1k1e_A 10 FVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRIA 70 (180)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHHH
T ss_pred EEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHHHH
Confidence 7999999999973211 00124667899999999999 99999999999777665553
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00031 Score=74.14 Aligned_cols=55 Identities=22% Similarity=0.219 Sum_probs=43.6
Q ss_pred EEEEecCCCcCCCCCC-------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCc-hhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPH-------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRN-VHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~-------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~-~~~l~~~l 95 (1460)
+++||+||||++.... .....+.|++.++|++|+++ |++++|+||++ ...+...+
T Consensus 29 ~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~~~~~~~~l 103 (187)
T 2wm8_A 29 LAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSEIEGANQLL 103 (187)
T ss_dssp EEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSCHHHHHHHH
T ss_pred EEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCChHHHHHHH
Confidence 7999999999853211 23456789999999999999 99999999998 56665554
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00024 Score=72.90 Aligned_cols=56 Identities=20% Similarity=0.327 Sum_probs=42.3
Q ss_pred EEEEecCCCcCCCCCC-----CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPH-----PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~-----p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++.... .....+++.+.++|+.|+++ |++++|+|||+...+...+.
T Consensus 11 ~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~ 71 (162)
T 2p9j_A 11 LLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRDSAPLITRLK 71 (162)
T ss_dssp EEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCCCHHHHHHHH
T ss_pred EEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCCcHHHHHHHH
Confidence 7999999999963210 00123456788999999999 99999999998777666553
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00034 Score=78.72 Aligned_cols=52 Identities=29% Similarity=0.280 Sum_probs=40.9
Q ss_pred CCcEEEEEecCCCcCCCCC-----------CC---------CCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 36 TNKLALLLDYDGTLAPIAP-----------HP---------DMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~-----------~p---------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
...-+++||+||||++-.+ .+ ....+.|++.++|+.|+++ |++++|+|||+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~ 128 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKT 128 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEG
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCch
Confidence 3445899999999997420 00 0145788999999999999 999999999983
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0031 Score=80.39 Aligned_cols=150 Identities=11% Similarity=0.094 Sum_probs=103.6
Q ss_pred cCCeEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCC
Q psy775 339 TKQKIVLGVDRLDYTKGLVH-RLKAFETLLE--KHPEHL-EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 414 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~-lL~Af~~lL~--~~P~~~-~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~ 414 (1460)
++..++..|.|+..-||... ++..++++++ ++|+.. ..+++|..|.+..+. .....+.+.+..++.-||..=.-.
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 46788999999999999999 8999998875 455421 247777777555443 233466677888888777631111
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccEEEEccC--CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc------ccEE
Q psy775 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH------EALI 486 (1460)
Q Consensus 415 ~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl--rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~------~all 486 (1460)
+.-.|+++ ...+.+--..+|.+||+++.||+ .|.-|+.-.=||. .|+|-+|..-|+..++. .+.+
T Consensus 603 ~~lKVvfl-~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~------NGaL~iGtLDGanvEi~e~vG~~NgF~ 675 (796)
T 1l5w_A 603 DKLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLAL------NGALTVGTLDGANVEIAEKVGEENIFI 675 (796)
T ss_dssp GGEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHH------TTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred CceEEEEE-CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH------cCCeeecCcCCeeeehhhccCCCcEEE
Confidence 11235555 44555544568999999999999 8877777666665 36666688888876652 2788
Q ss_pred ECCCCHHHHHH
Q psy775 487 CNPYEIDAAAE 497 (1460)
Q Consensus 487 VNP~D~~elA~ 497 (1460)
+.. +++++.+
T Consensus 676 FG~-~~~ev~~ 685 (796)
T 1l5w_A 676 FGH-TVEQVKA 685 (796)
T ss_dssp CSC-CHHHHHH
T ss_pred ecC-CHHHHHH
Confidence 877 7777764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00097 Score=74.36 Aligned_cols=53 Identities=32% Similarity=0.499 Sum_probs=45.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
.-++++|+||||.+- +..+++...++|++|.+. +.++|.|||+...+.+.++.
T Consensus 13 ~kli~~DlDGTLl~~-----~~~is~~~~~al~~l~~~--i~v~iaTGR~~~~~~~~l~~ 65 (262)
T 2fue_A 13 RVLCLFDVDGTLTPA-----RQKIDPEVAAFLQKLRSR--VQIGVVGGSDYCKIAEQLGD 65 (262)
T ss_dssp CEEEEEESBTTTBST-----TSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHSS
T ss_pred eEEEEEeCccCCCCC-----CCcCCHHHHHHHHHHHhC--CEEEEEcCCCHHHHHHHHhh
Confidence 458999999999862 346899999999999876 69999999999999888765
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00089 Score=74.46 Aligned_cols=52 Identities=23% Similarity=0.418 Sum_probs=45.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
++++|+||||.+- ...+++.++++|++|.++ |+.++++|||+...+.+.++.
T Consensus 6 li~~DlDGTLl~~-----~~~i~~~~~~~l~~l~~~-g~~~~iaTGR~~~~~~~~l~~ 57 (246)
T 3f9r_A 6 LLLFDVDGTLTPP-----RLCQTDEMRALIKRARGA-GFCVGTVGGSDFAKQVEQLGR 57 (246)
T ss_dssp EEEECSBTTTBST-----TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHCT
T ss_pred EEEEeCcCCcCCC-----CCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHhhh
Confidence 7999999999863 346889999999999986 679999999999999998885
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0019 Score=82.22 Aligned_cols=151 Identities=12% Similarity=0.117 Sum_probs=103.7
Q ss_pred cCCeEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCC
Q psy775 339 TKQKIVLGVDRLDYTKGLVH-RLKAFETLLE--KHPEHL-EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 414 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~-lL~Af~~lL~--~~P~~~-~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~ 414 (1460)
++..++..|.|+..-||... ++..++++++ ++|+.. ..+++|..|.+..+. .....+.+.+..++.-||..=.-.
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 46788999999999999999 8999998875 566521 246777777555443 233466677888888777641112
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccEEEEccC--CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc------ccEE
Q psy775 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH------EALI 486 (1460)
Q Consensus 415 ~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl--rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~------~all 486 (1460)
+.-.|+++. ..+.+--..+|.+||+++.||+ .|.-|+.-.=||. .|+|-+|..-|+..++. .+.+
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~------NGaL~iGtLDGanvEi~e~vG~~NgF~ 665 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMM------NGALTLGTMDGANVEIVDSVGEENAYI 665 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHH------TTCEEEEESSTHHHHHHHHHCGGGSEE
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH------cCCeEEeccCCeEeehhhhcCCCcEEE
Confidence 223466664 4444444468999999999999 8877777666665 36666688888876652 2788
Q ss_pred ECC--CCHHHHHH
Q psy775 487 CNP--YEIDAAAE 497 (1460)
Q Consensus 487 VNP--~D~~elA~ 497 (1460)
+.. .++.++-.
T Consensus 666 FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 666 FGARVEELPALRE 678 (796)
T ss_dssp ESCCTTTHHHHHH
T ss_pred ecCchhhHHHHHH
Confidence 876 55555543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00071 Score=66.37 Aligned_cols=49 Identities=18% Similarity=0.133 Sum_probs=40.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+++||+||||.. ...+.|++.++|++|+++ |++++|+|+++...+...+
T Consensus 4 ~i~~D~DgtL~~------~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l 52 (137)
T 2pr7_A 4 GLIVDYAGVLDG------TDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGAAPI 52 (137)
T ss_dssp EEEECSTTTTSS------CHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGGHHH
T ss_pred EEEEeccceecC------CCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHH
Confidence 689999999942 345778999999999999 9999999999866654443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0012 Score=74.35 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=42.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.+- ...+++..+++|+++.+. ++.++++|||+...+..++
T Consensus 7 li~~DlDGTLl~~-----~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~~~~~~~~~ 56 (282)
T 1rkq_A 7 LIAIDMDGTLLLP-----DHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYL 56 (282)
T ss_dssp EEEECCCCCCSCT-----TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHH
T ss_pred EEEEeCCCCCCCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHH
Confidence 7999999999862 356899999999999876 6799999999998877543
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0026 Score=81.34 Aligned_cols=151 Identities=11% Similarity=0.104 Sum_probs=102.5
Q ss_pred cCCeEEEEecCccccCCHHHH-HHHHHHHH--HhCCCCCC-cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCC
Q psy775 339 TKQKIVLGVDRLDYTKGLVHR-LKAFETLL--EKHPEHLE-KVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 414 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~l-L~Af~~lL--~~~P~~~~-kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~ 414 (1460)
++..++..|.|+..-||.... +..+++++ .++|+..- .+++|..|.+..++ .....+.+.+..++..+|..=.-.
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 467889999999999999998 88998886 35665321 35677666555443 233466677888888886541111
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccEEEEccC--CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc----cc--cEE
Q psy775 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM----HE--ALI 486 (1460)
Q Consensus 415 ~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl--rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L----~~--all 486 (1460)
+.-.|+++ ...+.+--..+|.+||+++.||+ .|.-|+.-.=||. .|+|-+|..-|+..++ ++ +.+
T Consensus 627 ~~lKVvFl-~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKaml------NGaLtigtlDGanvEi~e~vG~~Ngf~ 699 (824)
T 2gj4_A 627 DRLRVIFL-ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFML------NGALTIGTMDGANVEMAEEAGEENFFI 699 (824)
T ss_dssp GGEEEEEE-TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHH------TTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred CceEEEEE-CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH------cCceEEEEecCccchhhhccCCCCEEE
Confidence 22246666 44444444468999999999999 8877777666665 3666777777776444 22 788
Q ss_pred ECCCCHHHHHHHH
Q psy775 487 CNPYEIDAAAEVI 499 (1460)
Q Consensus 487 VNP~D~~elA~AI 499 (1460)
+... .+++ .++
T Consensus 700 FG~~-~~ev-~~l 710 (824)
T 2gj4_A 700 FGMR-VEDV-DRL 710 (824)
T ss_dssp CSCC-HHHH-HHH
T ss_pred eCCc-HHHH-HHH
Confidence 8775 7777 555
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00085 Score=74.23 Aligned_cols=49 Identities=16% Similarity=0.223 Sum_probs=41.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+++||+||||++- ..+.+.++++|++|+++ |++++++| ||+...+.+.+
T Consensus 19 ~v~~DlDGTLl~~------~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~~~~~~~~~ 70 (271)
T 1vjr_A 19 LFILDMDGTFYLD------DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKL 70 (271)
T ss_dssp EEEECCBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHH
T ss_pred EEEEcCcCcEEeC------CEECcCHHHHHHHHHHc-CCeEEEEECCCCCCHHHHHHHH
Confidence 7999999999962 34678999999999999 99999999 88877766555
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0015 Score=67.39 Aligned_cols=53 Identities=21% Similarity=0.279 Sum_probs=39.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC---hhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN---VHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~---~~~l~~~ 1451 (1460)
++|+|+||||..- ..|.-....|.+.++|++|.+. |..++++|||+ +..+.+.
T Consensus 5 ~i~~DlDGTL~~~-~~~~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~~~~~~~~~~ 60 (142)
T 2obb_A 5 TIAVDFDGTIVEH-RYPRIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEW 60 (142)
T ss_dssp EEEECCBTTTBCS-CTTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHH
T ss_pred EEEEECcCCCCCC-CCccccccCHHHHHHHHHHHHC-CCEEEEEeCCCcccHHHHHHH
Confidence 7899999999982 2232234567899999999876 57999999998 4555543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0016 Score=73.22 Aligned_cols=53 Identities=28% Similarity=0.376 Sum_probs=44.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc---CCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIE 1455 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~---~~~ 1455 (1460)
++++|+||||.. +...+++.+.++|+++.+. ++.+++.|||+...+..++ |++
T Consensus 23 li~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 23 VVASDLDGTLLS-----PDHFLTPYAKETLKLLTAR-GINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp EEEEECCCCCSC-----TTSCCCHHHHHHHHHHHTT-TCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred EEEEeCcCCCCC-----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 799999999985 2457899999999999877 7899999999988776554 554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.001 Score=68.75 Aligned_cols=123 Identities=13% Similarity=0.130 Sum_probs=80.9
Q ss_pred CCeEEEEecCcc---ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCc
Q psy775 340 KQKIVLGVDRLD---YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416 (1460)
Q Consensus 340 ~~kvIL~VgRLd---~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~ 416 (1460)
...+++++|++. +.|++..+++|+.++ + + .++.++.+.... .+.
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~~~----------------~~~-------- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNKPD----------------TLG-------- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSCCT----------------TCC--------
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcCcc----------------cCC--------
Confidence 356889999995 778888888887542 2 2 233333221100 010
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECC
Q psy775 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNP 489 (1460)
Q Consensus 417 ~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP 489 (1460)
..+ .+.+.+++.++.++ ..||++|.. .| +.+..|+|+| +.|+|+....+ .+..+ +.|+.+++
T Consensus 68 ~~v-~~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~-----G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~ 136 (170)
T 2o6l_A 68 LNT-RLYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYH-----GIPMVGIPLFADQPDNIAHMKARGAAVRVDF 136 (170)
T ss_dssp TTE-EEESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHH-----TCCEEECCCSTTHHHHHHHHHTTTSEEECCT
T ss_pred CcE-EEecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHc-----CCCEEeccchhhHHHHHHHHHHcCCeEEecc
Confidence 123 44689999777553 999999974 34 4799999999 45567776642 23333 23888888
Q ss_pred C--CHHHHHHHHHHHcCCC
Q psy775 490 Y--EIDAAAEVIHRALTMP 506 (1460)
Q Consensus 490 ~--D~~elA~AI~~aL~m~ 506 (1460)
. +.++++++|.++|+++
T Consensus 137 ~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 137 NTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TTCCHHHHHHHHHHHHHCH
T ss_pred ccCCHHHHHHHHHHHHcCH
Confidence 7 7899999999999754
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0016 Score=71.01 Aligned_cols=54 Identities=22% Similarity=0.441 Sum_probs=43.8
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~~ 1456 (1460)
++++|+||||.+- ...+++...++|+++.++ ++.++++|||+...+.++ +|++.
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~v~i~TGR~~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 5 AISIDIDGTITYP-----NRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILIGTSG 61 (231)
T ss_dssp EEEEESTTTTBCT-----TSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred EEEEECCCCCCCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHcCCCC
Confidence 6899999999963 346889999999999876 679999999999877654 45543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0019 Score=72.03 Aligned_cols=53 Identities=21% Similarity=0.306 Sum_probs=42.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~~ 1456 (1460)
++++|+||||..- ...+++...++|++ .+ .|+.++++|||+...+... +|++.
T Consensus 4 li~~DlDGTLl~~-----~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 4 VFVFDLDGTLLND-----NLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp EEEEECCCCCSCT-----TSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred EEEEeCCCcCCCC-----CCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 6899999999862 35688999999999 54 4789999999999887665 45543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0015 Score=74.61 Aligned_cols=51 Identities=25% Similarity=0.389 Sum_probs=43.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.+-. ...+++..+++|++|.+. |+.++++|||+...+..++
T Consensus 29 li~~DlDGTLl~~~----~~~is~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 29 LLLIDFDGTLFVDK----DIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp EEEEETBTTTBCCT----TTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHH
T ss_pred EEEEECCCCCcCCC----CCccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHh
Confidence 79999999998631 346899999999999876 6799999999999887766
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0043 Score=72.58 Aligned_cols=164 Identities=12% Similarity=0.042 Sum_probs=94.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
....++++.|++. .|+......+++. +++.+ + .++.++.+.. .. ++++. + .+
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~-l~~~~-~----~~~~~~g~~~-~~-------~~l~~----~---------~~ 292 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDG-LAGLD-A----DVLVASGPSL-DV-------SGLGE----V---------PA 292 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHH-HHTSS-S----EEEEECCSSC-CC-------TTCCC----C---------CT
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHH-HHcCC-C----EEEEEECCCC-Ch-------hhhcc----C---------CC
Confidence 3457888999996 5665555555554 44442 2 2333332221 00 11110 1 12
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
-+.+.+.++ +..+|+.||++|..| |. .+.+|+|+| +.|+|+....+--. .+.+.+.+
T Consensus 293 ~v~~~~~~~---~~~~l~~ad~~v~~~---g~-~t~~Ea~a~-----G~P~v~~p~~~~q~----------~~~~~v~~- 349 (412)
T 3otg_A 293 NVRLESWVP---QAALLPHVDLVVHHG---GS-GTTLGALGA-----GVPQLSFPWAGDSF----------ANAQAVAQ- 349 (412)
T ss_dssp TEEEESCCC---HHHHGGGCSEEEESC---CH-HHHHHHHHH-----TCCEEECCCSTTHH----------HHHHHHHH-
T ss_pred cEEEeCCCC---HHHHHhcCcEEEECC---ch-HHHHHHHHh-----CCCEEecCCchhHH----------HHHHHHHH-
Confidence 255667774 667889999999776 32 578999999 67888876653111 00011111
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY--EIDAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~--d~~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
...+++++|. |.++++++|.++|+++...++. .+..+++
T Consensus 350 --------------------------------------~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~-~~~~~~~ 390 (412)
T 3otg_A 350 --------------------------------------AGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGA-RAVAAEI 390 (412)
T ss_dssp --------------------------------------HTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHH-HHHHHHH
T ss_pred --------------------------------------cCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHH-HHHHHHH
Confidence 1235778776 9999999999999875433333 3333555
Q ss_pred HHhcCHHHHHHHHHHH
Q psy775 977 EKVHDVNYWMRSFLKG 992 (1460)
Q Consensus 977 v~~~~~~~W~~~~l~~ 992 (1460)
...++....++.+.+-
T Consensus 391 ~~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 391 AAMPGPDEVVRLLPGF 406 (412)
T ss_dssp HHSCCHHHHHTTHHHH
T ss_pred hcCCCHHHHHHHHHHH
Confidence 5666666655544433
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.001 Score=73.79 Aligned_cols=44 Identities=14% Similarity=0.293 Sum_probs=36.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
+++||+||||++- ...+ +++.++|++|+++ |++++++|||+...
T Consensus 3 ~i~~D~DGtL~~~-----~~~~-~~~~~~l~~l~~~-g~~~~~~T~r~~~~ 46 (263)
T 1zjj_A 3 AIIFDMDGVLYRG-----NRAI-PGVRELIEFLKER-GIPFAFLTNNSTKT 46 (263)
T ss_dssp EEEEECBTTTEET-----TEEC-TTHHHHHHHHHHH-TCCEEEEESCCSSC
T ss_pred EEEEeCcCceEeC-----CEeC-ccHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 6899999999962 2234 6899999999999 99999999998544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0018 Score=72.29 Aligned_cols=51 Identities=16% Similarity=0.242 Sum_probs=42.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChh-HHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEE-TKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~-~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
++++|+||||..= ...+++. ++++|++|.++ |+.+++.|||+...+...++
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~ 56 (271)
T 1rlm_A 5 VIVTDMDGTFLND-----AKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFP 56 (271)
T ss_dssp EEEECCCCCCSCT-----TSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCT
T ss_pred EEEEeCCCCCCCC-----CCcCCHHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHH
Confidence 7899999999862 3467887 59999999775 67999999999999987663
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.002 Score=66.87 Aligned_cols=48 Identities=17% Similarity=0.328 Sum_probs=41.8
Q ss_pred EEEEecCCCCCC----CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCCh
Q psy775 1397 ALLLDYDGTLAP----IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 1445 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~ 1445 (1460)
++|||+||||.. ...+++...+.|++.++|++|.+. +.+++|+|+++.
T Consensus 3 ~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 3 LIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSG 54 (179)
T ss_dssp EEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTT
T ss_pred EEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 689999999985 556777888999999999999876 579999999985
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0014 Score=71.90 Aligned_cols=54 Identities=20% Similarity=0.387 Sum_probs=44.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc---CCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~---~~~~ 1456 (1460)
++++|+||||.+- +..+++...++|++|.++ ++.++++|||+...+.+++ +++.
T Consensus 7 li~~DlDGTLl~~-----~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 7 LAAIDVDGNLTDR-----DRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGING 63 (227)
T ss_dssp EEEEEHHHHSBCT-----TSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred EEEEECCCCCcCC-----CCcCCHHHHHHHHHHHHC-CCEEEEECCCCcHHHHHHHHHhCCCC
Confidence 7999999999873 356899999999999875 6799999999998887653 5553
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0018 Score=76.47 Aligned_cols=75 Identities=19% Similarity=0.117 Sum_probs=56.2
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECCC--C
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNPY--E 491 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP~--D 491 (1460)
.+.+.+++. .+|+.||++|..| |. .+.+|||+| |.|+|+....| .++.+ +.|+.+++. |
T Consensus 286 ~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~-----G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 353 (430)
T 2iyf_A 286 EVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLAT-----ATPMIAVPQAVDQFGNADMLQGLGVARKLATEEAT 353 (430)
T ss_dssp EEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHT-----TCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CC
T ss_pred EEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHh-----CCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCC
Confidence 345888876 5799999998865 43 589999999 56668877654 23333 238889887 8
Q ss_pred HHHHHHHHHHHcCCCH
Q psy775 492 IDAAAEVIHRALTMPE 507 (1460)
Q Consensus 492 ~~elA~AI~~aL~m~~ 507 (1460)
.++++++|.++|+++.
T Consensus 354 ~~~l~~~i~~ll~~~~ 369 (430)
T 2iyf_A 354 ADLLRETALALVDDPE 369 (430)
T ss_dssp HHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHcCHH
Confidence 8999999999998643
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0027 Score=70.64 Aligned_cols=50 Identities=22% Similarity=0.458 Sum_probs=42.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+++||+||||.. ....+++..+++|+++.+. ++.++++|||+...+..++
T Consensus 7 li~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~ 56 (279)
T 4dw8_A 7 LIVLDLDGTLTN-----SKKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLA 56 (279)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred EEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 689999999984 2357899999999999877 6899999999998887654
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0026 Score=71.43 Aligned_cols=52 Identities=19% Similarity=0.339 Sum_probs=43.8
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
++++|+||||.. .+...+++.++++|+++.+. ++.+++.|||+...+..+++
T Consensus 23 li~~DlDGTLl~----~~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~ 74 (283)
T 3dao_A 23 LIATDIDGTLVK----DGSLLIDPEYMSVIDRLIDK-GIIFVVCSGRQFSSEFKLFA 74 (283)
T ss_dssp EEEECCBTTTBS----TTCSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHTG
T ss_pred EEEEeCcCCCCC----CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHH
Confidence 799999999973 22237889999999999877 78999999999999887653
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0024 Score=71.84 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=41.3
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
.-++++|+||||..-. ..+++...++|++|.+. ++.++++|||+...+..++
T Consensus 9 ~~li~~DlDGTLl~~~-----~~~~~~~~~~l~~l~~~-G~~~~iaTGR~~~~~~~~~ 60 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDSH-----SYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQ 60 (275)
T ss_dssp CEEEEEECTTTTSCSS-----CCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHH
T ss_pred ceEEEEeCCCCCCCCC-----CcCCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH
Confidence 3489999999998531 24556789999999875 6799999999998877654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.017 Score=67.16 Aligned_cols=139 Identities=12% Similarity=0.052 Sum_probs=86.2
Q ss_pred CeEEEEecCcccc-------CCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCC
Q psy775 341 QKIVLGVDRLDYT-------KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413 (1460)
Q Consensus 341 ~kvIL~VgRLd~~-------KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~ 413 (1460)
..+++++|++... +.+..+++|+++. ++ .++.++ + .+..+++ .. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~----~~~~~~----g-~~~~~~l----~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DV----ELIVAA----P-DTVAEAL----RA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TC----EEEEEC----C-HHHHHHH----HH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----Cc----EEEEEe----C-CCCHHhh----CC----CCC----
Confidence 5688999999875 6778888887542 22 233222 1 1222222 11 111
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEE
Q psy775 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALI 486 (1460)
Q Consensus 414 ~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~all 486 (1460)
. +.+ +.+++.+ +|+.||++|..+ | ..+..|||+| |.|+|+....+ .++.+ +.|+.
T Consensus 265 ----~-v~~-~~~~~~~---~l~~~d~~v~~~---G-~~t~~Ea~~~-----G~P~v~~p~~~dq~~~a~~~~~~g~g~~ 326 (384)
T 2p6p_A 265 ----Q-ARV-GWTPLDV---VAPTCDLLVHHA---G-GVSTLTGLSA-----GVPQLLIPKGSVLEAPARRVADYGAAIA 326 (384)
T ss_dssp ----T-SEE-ECCCHHH---HGGGCSEEEECS---C-TTHHHHHHHT-----TCCEEECCCSHHHHHHHHHHHHHTSEEE
T ss_pred ----c-eEE-cCCCHHH---HHhhCCEEEeCC---c-HHHHHHHHHh-----CCCEEEccCcccchHHHHHHHHCCCeEe
Confidence 1 234 7787655 579999999863 4 4578999999 55667776643 33333 23788
Q ss_pred ECCC--CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 487 CNPY--EIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 487 VNP~--D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+++. +.++++++|.++|+++. .+.+++.+.+.+....
T Consensus 327 ~~~~~~~~~~l~~~i~~ll~~~~--~~~~~~~~~~~~~~~~ 365 (384)
T 2p6p_A 327 LLPGEDSTEAIADSCQELQAKDT--YARRAQDLSREISGMP 365 (384)
T ss_dssp CCTTCCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHTSC
T ss_pred cCcCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHhCC
Confidence 8875 78999999999998643 3344555555554433
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0022 Score=69.16 Aligned_cols=47 Identities=17% Similarity=0.306 Sum_probs=38.9
Q ss_pred EEEEecCCCcCCCC---CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIA---PHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~---~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||+||||+.-. .+.+...+.|++.++|++|+++ |++++|+|+++
T Consensus 27 ~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~ 76 (211)
T 2gmw_A 27 AIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQS 76 (211)
T ss_dssp EEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECT
T ss_pred EEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHC-CCeEEEEECcC
Confidence 79999999999632 1112346788999999999999 99999999998
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0021 Score=73.14 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=45.8
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 21 TLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+.+++.+.+.. . + +++||+||||++- ..+.+++.++|++|+++ |++++++| ||+...+...+
T Consensus 10 ~~~~~~~~~~~-~----k-~i~~D~DGTL~~~------~~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~~~~~~~~~ 74 (306)
T 2oyc_A 10 RGAALRDVLGR-A----Q-GVLFDCDGVLWNG------ERAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRF 74 (306)
T ss_dssp CHHHHHHHHHH-C----S-EEEECSBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHH
T ss_pred CHHHHHHHHhh-C----C-EEEECCCCcEecC------CccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHH
Confidence 44455555544 1 2 7999999999962 23567899999999999 99999999 57766665444
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.002 Score=68.87 Aligned_cols=49 Identities=12% Similarity=0.272 Sum_probs=39.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+++||+||||++- ...+++. .+++++|+++ |+.+.++| ||+...+.+.+
T Consensus 5 ~i~fDlDGTLl~~-----~~~~~~~-~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~ 56 (250)
T 2c4n_A 5 NVICDIDGVLMHD-----NVAVPGA-AEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRF 56 (250)
T ss_dssp EEEEECBTTTEET-----TEECTTH-HHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHH
T ss_pred EEEEcCcceEEeC-----CEeCcCH-HHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHH
Confidence 7999999999972 3446666 9999999998 99999999 88877765544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0024 Score=70.56 Aligned_cols=50 Identities=30% Similarity=0.490 Sum_probs=42.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+++||+||||.. ++...+++...++|+++.+. ++.+++.|||+...+..+
T Consensus 14 li~~DlDGTLl~----~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~ 63 (268)
T 3r4c_A 14 VLLLDVDGTLLS----FETHKVSQSSIDALKKVHDS-GIKIVIATGRAASDLHEI 63 (268)
T ss_dssp EEEECSBTTTBC----TTTCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCCGGG
T ss_pred EEEEeCCCCCcC----CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHhHHH
Confidence 799999999984 34567899999999999887 689999999998877443
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0072 Score=70.84 Aligned_cols=139 Identities=15% Similarity=0.115 Sum_probs=79.1
Q ss_pred CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
..+++..|++...+.-..+.+|++++ +.-. ++.++.++.. + .++.+++.. ...+.. +.
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~--~---~~~~~~~~~----~~~~~~--------~~ 238 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR--Q---HAEITAERY----RTVAVE--------AD 238 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT--T---THHHHHHHH----HHTTCC--------CE
T ss_pred cEEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc--c---cccccccee----cccccc--------cc
Confidence 34556667877666666666666554 3221 2333333311 1 223333332 222221 22
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch--------hcc---cccEEECC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG--------EQM---HEALICNP 489 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa--------~~L---~~allVNP 489 (1460)
+ .+++ +++..+|+.||++|..| | +.+..|+++|+ -|.|+.-+.++. +.+ +.|++++.
T Consensus 239 v-~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G-----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~ 306 (365)
T 3s2u_A 239 V-APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG-----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQ 306 (365)
T ss_dssp E-ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT-----CCEEECC-----CCHHHHHHHHHHTTTSEEECCT
T ss_pred c-ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC-----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeec
Confidence 2 2544 46788999999998644 5 56778999994 445665554332 223 23788876
Q ss_pred CC--HHHHHHHHHHHcCCCHHHHHHH
Q psy775 490 YE--IDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 490 ~D--~~elA~AI~~aL~m~~~er~~R 513 (1460)
.| +++++++|.++|++|+..++++
T Consensus 307 ~~~~~~~L~~~i~~ll~d~~~~~~m~ 332 (365)
T 3s2u_A 307 KSTGAAELAAQLSEVLMHPETLRSMA 332 (365)
T ss_dssp TTCCHHHHHHHHHHHHHCTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCHHHHHHHH
Confidence 54 7899999999999876554443
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0035 Score=75.10 Aligned_cols=48 Identities=27% Similarity=0.328 Sum_probs=38.2
Q ss_pred EEEEEecCCCcCCCC------CCCCCc-cCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 39 LALLLDYDGTLAPIA------PHPDMA-VLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~------~~p~~a-~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
-++|||+||||+.-. .++..- .+.|++.++|+.|+++ |++++|+|+++
T Consensus 59 k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 59 KVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp SEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred eEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 389999999998532 122222 3679999999999999 99999999965
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.003 Score=70.18 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=34.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+++||+||||..- ...+++...++|+++.+. ++.+++.|||+...+..++
T Consensus 7 li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~ 56 (279)
T 3mpo_A 7 LIAIDIDGTLLNE-----KNELAQATIDAVQAAKAQ-GIKVVLCTGRPLTGVQPYL 56 (279)
T ss_dssp EEEECC----------------CHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred EEEEcCcCCCCCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHH
Confidence 6899999999852 346899999999999877 6899999999998877654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.00019 Score=82.96 Aligned_cols=92 Identities=9% Similarity=-0.053 Sum_probs=57.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCch---hhhh---hhh--cccc--ceeEccCCcc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV---HNVM---EMV--GIEG--LTYAGNHGLE 109 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~---~~l~---~~l--~~~~--~~~ig~hGae 109 (1460)
+++||+||||++. + . .++|.+++++ |+.++++|||+. ..+. ..+ ..-+ ..+++.||+.
T Consensus 23 li~fDlDGTLld~----~------~-~~~l~~~~~~-g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~nGa~ 90 (332)
T 1y8a_A 23 MFFTDWEGPWILT----D------F-ALELCMAVFN-NARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVK 90 (332)
T ss_dssp EEEECSBTTTBCC----C------H-HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCC
T ss_pred EEEEECcCCCcCc----c------H-HHHHHHHHHC-CCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcCCcE
Confidence 7999999999973 1 1 1788899888 889999999998 6554 333 1111 1356889998
Q ss_pred cccCCCCcccc-CCCccchhhhhhHHHhhccCceeeecC
Q psy775 110 IIHPDGSRFVH-PIPTEFEDKVSDLLKTLQEKVMSVHID 147 (1460)
Q Consensus 110 i~~~g~~i~~~-pI~ee~vdeL~ii~~L~q~~~~pVfLd 147 (1460)
+...++. +.. .++.+.+.++ +..+.+ ++....++
T Consensus 91 i~~~~~~-~~~~~~~~~~~~~~--l~~l~~-g~~~~i~t 125 (332)
T 1y8a_A 91 NRDVERI-AELSAKFVPDAEKA--MATLQE-RWTPVVIS 125 (332)
T ss_dssp HHHHHHH-HHHHCCBCTTHHHH--HHHHHT-TCEEEEEE
T ss_pred EEECCeE-eeccCCCHHHHHHH--HHHHHc-CCcEEEEE
Confidence 8644333 333 3444444443 444555 54444443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0032 Score=68.63 Aligned_cols=53 Identities=11% Similarity=0.188 Sum_probs=42.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+++||+||||++-. .....+.+.+.++++.++++ |+.+.++| ||+...+...+
T Consensus 14 ~i~fDlDGTLl~s~--~~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~~~~~~~~l 69 (271)
T 2x4d_A 14 GVLLDISGVLYDSG--AGGGTAIAGSVEAVARLKRS-RLKVRFCTNESAASRAELVGQL 69 (271)
T ss_dssp EEEECCBTTTEECC--TTTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSCHHHHHHHH
T ss_pred EEEEeCCCeEEecC--CCCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCCHHHHHHHH
Confidence 79999999999731 00234678899999999999 99999999 99877765554
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0051 Score=69.84 Aligned_cols=51 Identities=20% Similarity=0.277 Sum_probs=43.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChh-HHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEE-TKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~-~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
+++||+||||..= ...+++. +.++|+++.+. ++.++++|||+...+..++.
T Consensus 39 li~fDlDGTLld~-----~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~ 90 (304)
T 3l7y_A 39 VIATDMDGTFLNS-----KGSYDHNRFQRILKQLQER-DIRFVVASSNPYRQLREHFP 90 (304)
T ss_dssp EEEECCCCCCSCT-----TSCCCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHHTTCT
T ss_pred EEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHH
Confidence 7999999999852 3457777 89999999877 67999999999999988765
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0048 Score=69.00 Aligned_cols=50 Identities=16% Similarity=0.344 Sum_probs=42.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+++||+||||..- ...+++...++|+++.+. ++.+++.|||+...+..++
T Consensus 8 li~fDlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~ 57 (290)
T 3dnp_A 8 LLALNIDGALLRS-----NGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIA 57 (290)
T ss_dssp EEEECCCCCCSCT-----TSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHH
T ss_pred EEEEcCCCCCCCC-----CCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHH
Confidence 6899999999852 346899999999999877 6899999999998876553
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0048 Score=65.13 Aligned_cols=55 Identities=22% Similarity=0.320 Sum_probs=42.0
Q ss_pred EEEEecCCCcCCCCC---------CCCCccCChhHHHHHHHHhcCCCceEEEEeCCch---hhhhhhh
Q psy775 40 ALLLDYDGTLAPIAP---------HPDMAVLPEETKRTLQKLANLPDVHISIISGRNV---HNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~---------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~---~~l~~~l 95 (1460)
++|||+||||..... ......+.|++.++|++|+++ |++++|+|+++. ..+...+
T Consensus 5 ~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l 71 (189)
T 3ib6_A 5 HVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATSDTEVIKRVL 71 (189)
T ss_dssp EEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHH
T ss_pred EEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCccchHHHHHHH
Confidence 789999999966211 112356889999999999999 999999999875 4444444
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0033 Score=64.44 Aligned_cols=56 Identities=14% Similarity=0.164 Sum_probs=38.8
Q ss_pred EEEEecCCCcCCCC-----CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIA-----PHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~-----~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++-. ..............+|+.|+++ |++++|+||++...+...+.
T Consensus 6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~ 66 (164)
T 3e8m_A 6 LILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRRAE 66 (164)
T ss_dssp EEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHHHH
T ss_pred EEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHHHH
Confidence 79999999999832 1111111222234469999999 99999999998777666654
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0031 Score=73.39 Aligned_cols=159 Identities=9% Similarity=-0.014 Sum_probs=96.0
Q ss_pred CCEEEEEEcCccccCCH-HHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDYTKGL-VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi-~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+.|+++.|++...|+. ...++++.+. +++|++ .++.++.+. .. +++. .. .+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~----~~v~~~~~~-----~~----~~l~-------~~------~~ 270 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGV----EAVIAVPPE-----HR----ALLT-------DL------PD 270 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTE----EEEEECCGG-----GG----GGCT-------TC------CT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCe----EEEEEECCc-----ch----hhcc-------cC------CC
Confidence 45778889999876655 7888888888 888864 344333221 11 1111 00 11
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
-+.+.+.+++.++ +..||++|.. |-..+..|+++| +.|+|+....+--. .+.+.+.
T Consensus 271 ~v~~~~~~~~~~l---l~~ad~~v~~----~G~~t~~Ea~~~-----G~P~v~~p~~~~q~----------~~a~~~~-- 326 (391)
T 3tsa_A 271 NARIAESVPLNLF---LRTCELVICA----GGSGTAFTATRL-----GIPQLVLPQYFDQF----------DYARNLA-- 326 (391)
T ss_dssp TEEECCSCCGGGT---GGGCSEEEEC----CCHHHHHHHHHT-----TCCEEECCCSTTHH----------HHHHHHH--
T ss_pred CEEEeccCCHHHH---HhhCCEEEeC----CCHHHHHHHHHh-----CCCEEecCCcccHH----------HHHHHHH--
Confidence 2566778887654 4999999853 334577999999 67778865532111 0001111
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC----CCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP----YEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP----~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
....+++++| .|.++++++|.++|+.+...++.+. ...
T Consensus 327 -------------------------------------~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~-~~~ 368 (391)
T 3tsa_A 327 -------------------------------------AAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIK-LSD 368 (391)
T ss_dssp -------------------------------------HTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHH-HHH
T ss_pred -------------------------------------HcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHH-HHH
Confidence 1124578888 8999999999999998765444332 224
Q ss_pred hHHHhcCHHHHHH
Q psy775 975 KREKVHDVNYWMR 987 (1460)
Q Consensus 975 ~~v~~~~~~~W~~ 987 (1460)
++...+.....++
T Consensus 369 ~~~~~~~~~~~~~ 381 (391)
T 3tsa_A 369 EITAMPHPAALVR 381 (391)
T ss_dssp HHHTSCCHHHHHH
T ss_pred HHHcCCCHHHHHH
Confidence 4444555554444
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0045 Score=61.85 Aligned_cols=49 Identities=24% Similarity=0.344 Sum_probs=38.1
Q ss_pred EEEEecCCCCCCCCCC-CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1397 ALLLDYDGTLAPIAPH-PDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~-P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
++++|+||||..-... .....+++...++|++|.+. ++.++++|||+..
T Consensus 3 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARNMR 52 (126)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTTTT
T ss_pred EEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhC-CCeEEEEeCCChh
Confidence 6899999999974322 11235778999999999876 6799999999864
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0068 Score=77.32 Aligned_cols=141 Identities=11% Similarity=0.112 Sum_probs=95.7
Q ss_pred HhhCCcCCCCCCEEEEEEcCccccCCHHH-HHHHHHHHHH--hCCCC-CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 730 AQAAPRVIDTKQKIVLGVDRLDYTKGLVH-RLKAFETLLE--KHPEH-LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 730 ~~~~~~~~~~~kkiIl~VdRLd~~KGi~~-kL~Afe~fL~--~~P~~-~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
+++....+.++..+++.|-|+..-||..+ .|...+++++ ++|+. ...+++|..|.+..+. .....+.+.+..++.
T Consensus 505 ~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~ 583 (796)
T 2c4m_A 505 LERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIAD 583 (796)
T ss_dssp HHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHH
Confidence 33333344567889999999999999999 8999999875 66652 1257777766665443 333456677888888
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
.||..=.-.+.-.|+++. ..+-+---.+|.+||+++.||+ .|.-|+.-+=||. .|.|-+|-.-|+-
T Consensus 584 ~in~dp~~~~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~------NGaL~iGtLDGan 651 (796)
T 2c4m_A 584 LVNNDPEVSPLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMM------NGALTLGTMDGAN 651 (796)
T ss_dssp HHHTCTTTTTTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHH------TTCEEEEESSTHH
T ss_pred HhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH------cCCeEEeccCCeE
Confidence 888742222222355554 4455444557999999999999 7888887777765 4666665555533
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0049 Score=64.86 Aligned_cols=58 Identities=22% Similarity=0.204 Sum_probs=43.4
Q ss_pred EEEEecCCCCCCCCC-------------------CCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC-hhhHH---HhcC
Q psy775 1397 ALLLDYDGTLAPIAP-------------------HPDMAVLPEETKRTLQKLANLPDVHISIISGRN-VHNVM---EMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~-------------------~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~-~~~l~---~~~~ 1453 (1460)
+++||+||||.+-.. ..+...+.|++.++|++|.+. +++++|+||++ ...+. +.+|
T Consensus 29 ~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~~~~~~~~l~~~g 107 (187)
T 2wm8_A 29 LAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSEIEGANQLLELFD 107 (187)
T ss_dssp EEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSCHHHHHHHHHHTT
T ss_pred EEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCChHHHHHHHHHcC
Confidence 789999999985321 134567889999999999876 56899999998 45544 4445
Q ss_pred CC
Q psy775 1454 IE 1455 (1460)
Q Consensus 1454 ~~ 1455 (1460)
+.
T Consensus 108 l~ 109 (187)
T 2wm8_A 108 LF 109 (187)
T ss_dssp CT
T ss_pred cH
Confidence 54
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0039 Score=69.00 Aligned_cols=49 Identities=29% Similarity=0.474 Sum_probs=40.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||..- +...+++..+++|+++.++ |+.++++|||+ ..+..+
T Consensus 4 li~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~-~~~~~~ 52 (261)
T 2rbk_A 4 ALFFDIDGTLVSF----ETHRIPSSTIEALEAAHAK-GLKIFIATGRP-KAIINN 52 (261)
T ss_dssp EEEECSBTTTBCT----TTSSCCHHHHHHHHHHHHT-TCEEEEECSSC-GGGCCS
T ss_pred EEEEeCCCCCcCC----CCCcCCHHHHHHHHHHHHC-CCEEEEECCCh-HHHHHH
Confidence 6899999999863 2334889999999999876 67999999999 776543
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.015 Score=74.32 Aligned_cols=138 Identities=13% Similarity=0.070 Sum_probs=94.3
Q ss_pred hhCCcCCCCCCEEEEEEcCccccCCHHH-HHHHHHHHHH--hCCCCC-CCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 731 QAAPRVIDTKQKIVLGVDRLDYTKGLVH-RLKAFETLLE--KHPEHL-EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 731 ~~~~~~~~~~kkiIl~VdRLd~~KGi~~-kL~Afe~fL~--~~P~~~-~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
++....+.++..+++.|-|+..-||..+ .|...+++++ ++|+.. ..+++|..|.+..+. .....+.+.+..++..
T Consensus 516 ~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~ 594 (796)
T 1l5w_A 516 VRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADV 594 (796)
T ss_dssp HHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHH
T ss_pred HHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHH
Confidence 3333444567889999999999999999 8999988875 466521 257777767665443 3334566778888888
Q ss_pred HhccCCCCCCcc--EEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 807 INGRFTTPNWSP--IRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 807 IN~~~~~~~~~p--vv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
||.. +.+.. .+.|....+-+---.+|.+||+.+.||+ .|.-|+.-+=||. .|.|-+|-.-|+-
T Consensus 595 in~D---p~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~------NGaL~iGtLDGan 661 (796)
T 1l5w_A 595 INND---PLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLAL------NGALTVGTLDGAN 661 (796)
T ss_dssp HHTC---TTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHH------TTCEEEECSCTTH
T ss_pred hccc---cccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH------cCCeeecCcCCee
Confidence 8864 22233 2444445555555567999999999999 8888888777765 4666666555543
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.014 Score=68.97 Aligned_cols=45 Identities=20% Similarity=0.142 Sum_probs=35.2
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
+.+.+.+++. .+|+.||++|..+ |. .+.+|+|+| +-|+|++...|
T Consensus 285 v~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~-----G~P~i~~p~~~ 329 (430)
T 2iyf_A 285 VEVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLAT-----ATPMIAVPQAV 329 (430)
T ss_dssp EEEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHT-----TCCEEECCCSH
T ss_pred eEEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHh-----CCCEEECCCcc
Confidence 5567888876 5799999988755 44 578999999 67889887754
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0029 Score=71.00 Aligned_cols=51 Identities=14% Similarity=0.395 Sum_probs=38.9
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHH-------HHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQ-------KLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~-------~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
.-+++||+||||.+-. +++....++. +++...++.++++|||+...+.+.+
T Consensus 22 ~kliifDlDGTLlds~-------i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~ 79 (289)
T 3gyg_A 22 QYIVFCDFDETYFPHT-------IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKM 79 (289)
T ss_dssp SEEEEEETBTTTBCSS-------CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHH
T ss_pred CeEEEEECCCCCcCCC-------CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHH
Confidence 3479999999999843 4555555555 4666778899999999999887754
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0043 Score=68.40 Aligned_cols=50 Identities=28% Similarity=0.440 Sum_probs=41.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+++||+||||..= ...+++...++|+++.+. ++.+++.|||+...+...+
T Consensus 7 li~fDlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~ 56 (274)
T 3fzq_A 7 LLILDIDGTLRDE-----VYGIPESAKHAIRLCQKN-HCSVVICTGRSMGTIQDDV 56 (274)
T ss_dssp EEEECSBTTTBBT-----TTBCCHHHHHHHHHHHHT-TCEEEEECSSCTTTSCHHH
T ss_pred EEEEECCCCCCCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHH
Confidence 6899999999843 235899999999999776 6799999999987765543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0045 Score=65.51 Aligned_cols=56 Identities=21% Similarity=0.379 Sum_probs=38.8
Q ss_pred EEEEecCCCcCC----CCCCCC-CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAP----IAPHPD-MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~----~~~~p~-~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++ +..... ..........+|++|+++ |++++|+||++...+...+.
T Consensus 28 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~~~~~~~~l~ 88 (188)
T 2r8e_A 28 LLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTS-DIEVAIITGRKAKLVEDRCA 88 (188)
T ss_dssp EEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTT-TCEEEEECSSCCHHHHHHHH
T ss_pred EEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHC-CCeEEEEeCCChHHHHHHHH
Confidence 799999999997 211111 011222234589999998 99999999998776665553
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0087 Score=67.36 Aligned_cols=50 Identities=22% Similarity=0.373 Sum_probs=42.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||..- ...+++...++|+++.+. |+.++++|||+...+...+
T Consensus 6 li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~ 55 (288)
T 1nrw_A 6 LIAIDLDGTLLNS-----KHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIF 55 (288)
T ss_dssp EEEEECCCCCSCT-----TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred EEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHH
Confidence 7899999999863 245789999999999875 6799999999999887654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0022 Score=72.49 Aligned_cols=53 Identities=13% Similarity=0.143 Sum_probs=42.9
Q ss_pred CCcEEEEEecCCCcCCCCC---------CC------------CCccCChhHHHHHHHHhcCCCceEEEEeCCchh
Q psy775 36 TNKLALLLDYDGTLAPIAP---------HP------------DMAVLPEETKRTLQKLANLPDVHISIISGRNVH 89 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~---------~p------------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~ 89 (1460)
..+.+++|||||||++-.. .+ ..+.+-|++.+.|+.|+++ |+.++|+|||+..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~ 129 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDS 129 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETT
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 5667999999999998642 01 2345667999999999999 9999999999864
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0029 Score=71.31 Aligned_cols=53 Identities=13% Similarity=0.063 Sum_probs=41.7
Q ss_pred CCcEEEEEecCCCcCCCCCC---------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCchh
Q psy775 36 TNKLALLLDYDGTLAPIAPH---------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 89 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~---------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~ 89 (1460)
..+.+++|||||||++-... -..+.+-|++++.|+.|+++ |+.++|+|||+..
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~ 129 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDD 129 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETT
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 45569999999999985311 12356678999999999999 9999999999754
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0087 Score=65.16 Aligned_cols=49 Identities=22% Similarity=0.358 Sum_probs=36.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+++||+||||++- .. +.+.+.++++.++++ |+.++++| ||+...+.+.+
T Consensus 9 ~i~fDlDGTLld~-----~~-~~~~~~~ai~~l~~~-G~~~~~~t~~~~~~~~~~~~~l 60 (259)
T 2ho4_A 9 AVLVDLNGTLHIE-----DA-AVPGAQEALKRLRAT-SVMVRFVTNTTKETKKDLLERL 60 (259)
T ss_dssp EEEEESSSSSCC---------CCTTHHHHHHHHHTS-SCEEEEEECCSSCCHHHHHHHH
T ss_pred EEEEeCcCcEEeC-----CE-eCcCHHHHHHHHHHC-CCeEEEEeCCCCcCHHHHHHHH
Confidence 7999999999972 22 336789999999999 99999999 55554444444
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0055 Score=68.56 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=39.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeC---Cchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTG---R~~~~l~~~l 95 (1460)
+++||+||||++- ..+.+++.++|++|+++ |++++++|| |+...+.+.+
T Consensus 16 ~i~~D~DGtL~~~------~~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r~~~~~~~~l 67 (284)
T 2hx1_A 16 CIFFDAFGVLKTY------NGLLPGIENTFDYLKAQ-GQDYYIVTNDASRSPEQLADSY 67 (284)
T ss_dssp EEEECSBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHH
T ss_pred EEEEcCcCCcCcC------CeeChhHHHHHHHHHHC-CCEEEEEeCCCCcCHHHHHHHH
Confidence 7999999999973 12457899999999999 999999996 6666655554
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.0032 Score=66.16 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=36.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhH-------HHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEET-------KRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~-------~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+++||+||||++- ...-..-.+.. ..+|+.|+++ |++++|+||++...+...+
T Consensus 14 ~vifD~DGTL~d~--~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~ 73 (176)
T 3mmz_A 14 AVVLDFDGTQTDD--RVLIDSDGREFVSVHRGDGLGIAALRKS-GLTMLILSTEQNPVVAARA 73 (176)
T ss_dssp EEEECCTTTTSCS--CCEECTTCCEEEEEEHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHH
T ss_pred EEEEeCCCCcCcC--CEeecCCccHhHhcccccHHHHHHHHHC-CCeEEEEECcChHHHHHHH
Confidence 8999999999982 11100001111 1259999999 9999999999877666555
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0017 Score=70.48 Aligned_cols=52 Identities=19% Similarity=0.317 Sum_probs=38.6
Q ss_pred EEEEEecCCCcCCCCCC---------CC--------------------CccCChhHHHHHHHHhcCCCceEEEEeCCchh
Q psy775 39 LALLLDYDGTLAPIAPH---------PD--------------------MAVLPEETKRTLQKLANLPDVHISIISGRNVH 89 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~---------p~--------------------~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~ 89 (1460)
-+++||+||||++.... +. ...+.+++.++|+.|+++ |++++|+||++..
T Consensus 38 kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~-G~~l~ivTn~~~~ 116 (211)
T 2b82_A 38 MAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR-GDAIFFVTGRSPT 116 (211)
T ss_dssp CEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH-TCEEEEEECSCCC
T ss_pred CEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC-CCEEEEEcCCcHH
Confidence 48999999999984210 00 011345899999999999 9999999999755
Q ss_pred hh
Q psy775 90 NV 91 (1460)
Q Consensus 90 ~l 91 (1460)
.+
T Consensus 117 ~~ 118 (211)
T 2b82_A 117 KT 118 (211)
T ss_dssp SS
T ss_pred HH
Confidence 43
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0045 Score=68.29 Aligned_cols=49 Identities=22% Similarity=0.278 Sum_probs=37.6
Q ss_pred EEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1396 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
.++++|+||||.+- +. . .+..+++|+++.+ ++.++++|||+...+..++
T Consensus 4 ~li~~DlDGTLl~~----~~-~-~~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~ 52 (244)
T 1s2o_A 4 LLLISDLDNTWVGD----QQ-A-LEHLQEYLGDRRG--NFYLAYATGRSYHSARELQ 52 (244)
T ss_dssp EEEEECTBTTTBSC----HH-H-HHHHHHHHHTTGG--GEEEEEECSSCHHHHHHHH
T ss_pred eEEEEeCCCCCcCC----HH-H-HHHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHH
Confidence 48999999999872 11 2 2577788888553 5799999999999887764
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0099 Score=63.91 Aligned_cols=56 Identities=21% Similarity=0.334 Sum_probs=40.3
Q ss_pred EEEEecCCCcCC---CCC--CCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAP---IAP--HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~---~~~--~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++ ... .+...........+|+.|+++ |++++|+||++...+...+.
T Consensus 27 ~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~~~~~~~~l~ 87 (195)
T 3n07_A 27 LLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNA-GIEIAIITGRRSQIVENRMK 87 (195)
T ss_dssp EEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHH
T ss_pred EEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHC-CCEEEEEECcCHHHHHHHHH
Confidence 899999999998 211 112223334445569999999 99999999998777666553
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.0057 Score=65.95 Aligned_cols=48 Identities=21% Similarity=0.337 Sum_probs=39.4
Q ss_pred EEEEecCCCcCCCC---CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 40 ALLLDYDGTLAPIA---PHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~---~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
+++||+||||+.-. .++....+.|++.++|++|+++ |++++|+||++.
T Consensus 33 ~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 33 ALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSG 83 (218)
T ss_dssp CEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHH
T ss_pred EEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCC
Confidence 68999999998631 1122456789999999999999 999999999986
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0067 Score=66.84 Aligned_cols=45 Identities=20% Similarity=0.319 Sum_probs=37.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
+++||+||||++- ...+ +.+.++|+.++++ |+.++++|||+....
T Consensus 7 ~v~fDlDGTL~~~-----~~~~-~~~~~~l~~l~~~-g~~~~~~t~~~~~~~ 51 (264)
T 1yv9_A 7 GYLIDLDGTIYLG-----KEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKSP 51 (264)
T ss_dssp EEEECCBTTTEET-----TEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSCH
T ss_pred EEEEeCCCeEEeC-----CEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCH
Confidence 7999999999972 2234 6899999999999 999999999975443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.011 Score=62.13 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=35.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChh----------HHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEE----------TKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s----------~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+++||+||||++- ...++++ ...+|+.|+++ |++++|+||+ ..+...+
T Consensus 11 liv~D~DGtL~d~-----~~~~~~~g~~~~~f~~~D~~~L~~Lk~~-Gi~~~I~Tg~--~~~~~~l 68 (168)
T 3ewi_A 11 LLVCNIDGCLTNG-----HIYVSGDQKEIISYDVKDAIGISLLKKS-GIEVRLISER--ACSKQTL 68 (168)
T ss_dssp EEEEECCCCCSCS-----CCBCCSSCCCEEEEEHHHHHHHHHHHHT-TCEEEEECSS--CCCHHHH
T ss_pred EEEEeCccceECC-----cEEEcCCCCEEEEEecCcHHHHHHHHHC-CCEEEEEeCc--HHHHHHH
Confidence 8999999999972 2223332 24689999999 9999999999 4444444
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.012 Score=61.83 Aligned_cols=49 Identities=22% Similarity=0.278 Sum_probs=40.2
Q ss_pred CcEEEEEecCCCcCCCC------CCCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 37 NKLALLLDYDGTLAPIA------PHPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~------~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
..-++|||.||||..-. ...+...+.|++.++|+.|+++ |++++|+|+.
T Consensus 13 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 13 SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred cCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 34589999999998642 2233567889999999999999 9999999997
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0062 Score=59.59 Aligned_cols=46 Identities=20% Similarity=0.149 Sum_probs=37.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 1449 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~ 1449 (1460)
++++|+||||. +...+.|++.++|++|.++ +.+++|+|+++...+.
T Consensus 4 ~i~~D~DgtL~------~~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~ 49 (137)
T 2pr7_A 4 GLIVDYAGVLD------GTDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGA 49 (137)
T ss_dssp EEEECSTTTTS------SCHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGG
T ss_pred EEEEeccceec------CCCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHH
Confidence 68999999992 2456778999999999876 6799999999876543
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0063 Score=64.63 Aligned_cols=56 Identities=21% Similarity=0.145 Sum_probs=37.7
Q ss_pred EEEEecCCCcCCCCCCCCC-----ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPHPDM-----AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~-----a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++-...-.. ....-..-.+|+.|+++ |++++|+||++...+...+.
T Consensus 21 ~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~ 81 (189)
T 3mn1_A 21 LAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIAS-GVTTAIISGRKTAIVERRAK 81 (189)
T ss_dssp EEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHH
T ss_pred EEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHC-CCEEEEEECcChHHHHHHHH
Confidence 8999999999973211000 00011112389999999 99999999998777666553
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.013 Score=64.36 Aligned_cols=49 Identities=27% Similarity=0.381 Sum_probs=40.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||..-. -.+++...++|+++.++ |+.+++.|||+...+..+
T Consensus 5 li~~DlDGTLl~~~-----~~i~~~~~~al~~l~~~-G~~~~~aTGR~~~~~~~~ 53 (258)
T 2pq0_A 5 IVFFDIDGTLLDEQ-----KQLPLSTIEAVRRLKQS-GVYVAIATGRAPFMFEHV 53 (258)
T ss_dssp EEEECTBTTTBCTT-----SCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGSHHH
T ss_pred EEEEeCCCCCcCCC-----CccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHH
Confidence 78999999997532 35789999999999876 679999999998876543
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.015 Score=59.97 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=59.9
Q ss_pred CCEEEEEEcCcc---ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 740 KQKIVLGVDRLD---YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 740 ~kkiIl~VdRLd---~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
...++++.|++. +.|++...++|+++ .+ + .++.++.+... + .+ .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~----~~-~----~~~~~~g~~~~--~--------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQ----IP-Q----KVLWRFDGNKP--D--------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTT----SS-S----EEEEECCSSCC--T--------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHh----CC-C----eEEEEECCcCc--c--------------cC----C----
Confidence 467899999995 66777777777643 23 2 23333322110 0 01 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
+-+.+.+.++++++.++ ..||++|.. .| ..+..|+++| +-|+|+....
T Consensus 68 -~~v~~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~-----G~P~i~~p~~ 115 (170)
T 2o6l_A 68 -LNTRLYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYH-----GIPMVGIPLF 115 (170)
T ss_dssp -TTEEEESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHH-----TCCEEECCCS
T ss_pred -CcEEEecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHc-----CCCEEeccch
Confidence 11556789999877654 999999963 34 4789999999 6788888875
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.0079 Score=61.48 Aligned_cols=55 Identities=22% Similarity=0.389 Sum_probs=40.0
Q ss_pred EEEEecCCCCCCCCC----C-CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAP----H-PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~----~-P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||..-.. . ......++...++|+.|.+. +.+++|+|||+...+...+
T Consensus 11 ~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l 70 (162)
T 2p9j_A 11 LLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRDSAPLITRL 70 (162)
T ss_dssp EEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCCCHHHHHHH
T ss_pred EEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCCcHHHHHHH
Confidence 789999999996221 1 11133467788999999876 5799999999877666543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.016 Score=61.72 Aligned_cols=56 Identities=18% Similarity=0.237 Sum_probs=37.7
Q ss_pred EEEEecCCCcCC---CCCC--CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAP---IAPH--PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~---~~~~--p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++ .... +........--.+|+.|+++ |++++|+||++...+...+.
T Consensus 21 ~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~~~~~~~~l~ 81 (191)
T 3n1u_A 21 CLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAA-GIQVAIITTAQNAVVDHRME 81 (191)
T ss_dssp EEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHT-TCEEEEECSCCSHHHHHHHH
T ss_pred EEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHC-CCeEEEEeCcChHHHHHHHH
Confidence 899999999997 2111 11111111222249999999 99999999998777665553
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.13 Score=59.61 Aligned_cols=92 Identities=11% Similarity=0.017 Sum_probs=57.2
Q ss_pred CCEEEEEEcCcccc-------CCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCC
Q psy775 740 KQKIVLGVDRLDYT-------KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFT 812 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~-------KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~ 812 (1460)
...+++++|++... +.+...++|+++. ++ .++.++. .++. ++++ .+...
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~----~~~~~~g-----~~~~----~~l~----~~~~~-- 265 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DV----ELIVAAP-----DTVA----EALR----AEVPQ-- 265 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TC----EEEEECC-----HHHH----HHHH----HHCTT--
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----Cc----EEEEEeC-----CCCH----HhhC----CCCCc--
Confidence 35788999999875 5677777777542 22 2332221 1111 2222 12111
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 813 TPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 813 ~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
+.+ +.+++.+ +|..||++|..+ |. .+..|+++| +-|+|+....
T Consensus 266 -------v~~-~~~~~~~---~l~~~d~~v~~~---G~-~t~~Ea~~~-----G~P~v~~p~~ 308 (384)
T 2p6p_A 266 -------ARV-GWTPLDV---VAPTCDLLVHHA---GG-VSTLTGLSA-----GVPQLLIPKG 308 (384)
T ss_dssp -------SEE-ECCCHHH---HGGGCSEEEECS---CT-THHHHHHHT-----TCCEEECCCS
T ss_pred -------eEE-cCCCHHH---HHhhCCEEEeCC---cH-HHHHHHHHh-----CCCEEEccCc
Confidence 345 7788755 578999999753 44 578999999 6788888774
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.016 Score=61.99 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=43.4
Q ss_pred EEEEecCCCCCCCCCC--C------CCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPH--P------DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~--P------~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
+++||+||||..+-.. + ....+-|++.++|+.|.++ ++++||+||++...+.++.+
T Consensus 8 av~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 8 ALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp CEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred EEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 6999999999874211 1 1236679999999999775 56899999999988766655
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=95.01 E-value=0.011 Score=61.87 Aligned_cols=54 Identities=19% Similarity=0.330 Sum_probs=39.7
Q ss_pred EEEEecCCCCCCCCCC--CC---CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPH--PD---MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~--P~---~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+++||+||||.+-... ++ ....++...++|++|.+. ++.++|+|||+...+...
T Consensus 10 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~ 68 (180)
T 1k1e_A 10 FVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRR 68 (180)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHH
T ss_pred EEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHH
Confidence 7899999999973211 11 124566788999999876 679999999987766544
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.025 Score=59.57 Aligned_cols=38 Identities=11% Similarity=0.067 Sum_probs=29.3
Q ss_pred CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 58 MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 58 ~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
...+.|++.++|+.|+++.|++++|+||++...+...+
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l 108 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG 108 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH
Confidence 34567899999999998647999999999765544333
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=94.93 E-value=0.082 Score=61.85 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=54.8
Q ss_pred cCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhcc
Q psy775 823 YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCP 902 (1460)
Q Consensus 823 ~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~ 902 (1460)
.+++ +++..+|+.||++|.- -| +.+..|++++ +-|.|+..+.++.. -++..-
T Consensus 240 ~~f~--~dm~~~l~~aDlvI~r---aG-~~Tv~E~~a~-----G~P~Ilip~p~~~~------------~~Q~~N----- 291 (365)
T 3s2u_A 240 APFI--SDMAAAYAWADLVICR---AG-ALTVSELTAA-----GLPAFLVPLPHAID------------DHQTRN----- 291 (365)
T ss_dssp ESCC--SCHHHHHHHCSEEEEC---CC-HHHHHHHHHH-----TCCEEECC-----C------------CHHHHH-----
T ss_pred ccch--hhhhhhhccceEEEec---CC-cchHHHHHHh-----CCCeEEeccCCCCC------------cHHHHH-----
Confidence 3444 3688899999999854 35 4677899999 66778877765433 001100
Q ss_pred ccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCC--CHHHHHHHHHHHhCCCHHHHHHH
Q psy775 903 YLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY--EIDAAAEVIHRALTMPEDERTLR 969 (1460)
Q Consensus 903 ~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~--d~~~iA~ai~~aL~m~~~er~~r 969 (1460)
|+.+. ....|++++.. +.++++++|.+.|++++..++++
T Consensus 292 -------A~~l~---------------------~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~ 332 (365)
T 3s2u_A 292 -------AEFLV---------------------RSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMA 332 (365)
T ss_dssp -------HHHHH---------------------TTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHH
T ss_pred -------HHHHH---------------------HCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHH
Confidence 11111 11235666544 58999999999999876544443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.017 Score=67.56 Aligned_cols=105 Identities=7% Similarity=-0.079 Sum_probs=59.7
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
+.+.+.++.. .++..||++|. .|-..+..|+++| +.|+|+....+ ++. .+.+.+.+
T Consensus 286 v~~~~~~~~~---~ll~~ad~~v~----~gG~~t~~Ea~~~-----G~P~v~~p~~~--~q~--------~~a~~~~~-- 341 (398)
T 4fzr_A 286 VLAAGQFPLS---AIMPACDVVVH----HGGHGTTLTCLSE-----GVPQVSVPVIA--EVW--------DSARLLHA-- 341 (398)
T ss_dssp EEEESCCCHH---HHGGGCSEEEE----CCCHHHHHHHHHT-----TCCEEECCCSG--GGH--------HHHHHHHH--
T ss_pred EEEeCcCCHH---HHHhhCCEEEe----cCCHHHHHHHHHh-----CCCEEecCCch--hHH--------HHHHHHHH--
Confidence 5667788754 55667999984 3445678999999 67888866542 111 01111111
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY--EIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~--d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
...++++++. |.++++++|.++|+.+...++.+.. ..++.
T Consensus 342 -------------------------------------~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~-~~~~~ 383 (398)
T 4fzr_A 342 -------------------------------------AGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRL-AAEMA 383 (398)
T ss_dssp -------------------------------------TTSEEECC-------CHHHHHHHHHHCTHHHHHHHHH-HHHHT
T ss_pred -------------------------------------cCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHH-HHHHH
Confidence 1235777776 7899999999999887654433322 23444
Q ss_pred HhcCHHHHH
Q psy775 978 KVHDVNYWM 986 (1460)
Q Consensus 978 ~~~~~~~W~ 986 (1460)
..+.....+
T Consensus 384 ~~~~~~~~~ 392 (398)
T 4fzr_A 384 TLPTPADIV 392 (398)
T ss_dssp TSCCHHHHH
T ss_pred cCCCHHHHH
Confidence 445544433
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.038 Score=65.82 Aligned_cols=140 Identities=9% Similarity=0.054 Sum_probs=81.9
Q ss_pred CeEEEEecCcccc-----CCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCC
Q psy775 341 QKIVLGVDRLDYT-----KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 415 (1460)
Q Consensus 341 ~kvIL~VgRLd~~-----KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~ 415 (1460)
..++++.|++... |++..+++|+.++ ++ .++..+... +. .++ . .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~~--~~---~~l-----------~-~----- 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDAQ--QL---EGV-----------A-N----- 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCTT--TT---SSC-----------S-S-----
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECCc--ch---hhh-----------c-c-----
Confidence 4588899999864 8888889888653 22 233222111 10 001 0 0
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEEC
Q psy775 416 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICN 488 (1460)
Q Consensus 416 ~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVN 488 (1460)
..+-+.+.+.+++.+ +|..||++|. ..| ..+..|+++| +.|+|+.-+.+ .++.+ +.|+.++
T Consensus 317 ~~~~v~~~~~~~~~~---ll~~ad~~V~---~~G-~~t~~Ea~~~-----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~ 384 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHA---LLPTCAATVH---HGG-PGSWHTAAIH-----GVPQVILPDGWDTGVRAQRTQEFGAGIALP 384 (441)
T ss_dssp CCSSEEECCSCCHHH---HGGGCSEEEE---CCC-HHHHHHHHHT-----TCCEEECCCSHHHHHHHHHHHHHTSEEECC
T ss_pred CCCCEEEecCCCHHH---HHhhCCEEEE---CCC-HHHHHHHHHh-----CCCEEEeCCcccHHHHHHHHHHcCCEEEcc
Confidence 111234568899865 4799999997 345 4578999999 55667776643 23333 3388888
Q ss_pred CC--CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 489 PY--EIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 489 P~--D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+. +.++++++|.++|+++. .+.+++.+.+.+...+
T Consensus 385 ~~~~~~~~l~~~i~~ll~~~~--~~~~~~~~~~~~~~~~ 421 (441)
T 2yjn_A 385 VPELTPDQLRESVKRVLDDPA--HRAGAARMRDDMLAEP 421 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHTSC
T ss_pred cccCCHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHcCC
Confidence 76 78999999999998643 3334444444444433
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.024 Score=60.98 Aligned_cols=47 Identities=17% Similarity=0.334 Sum_probs=39.1
Q ss_pred EEEEecCCCCCC---CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap---i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||+||||.. ....++...+.|++.++|++|.+. +++++|+|+++
T Consensus 27 ~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~ 76 (211)
T 2gmw_A 27 AIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQS 76 (211)
T ss_dssp EEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECT
T ss_pred EEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHC-CCeEEEEECcC
Confidence 799999999985 333445567889999999999876 57999999999
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.036 Score=64.29 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=59.2
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC-C----Cchhcc---cccEEECCC--
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-A----GAGEQM---HEALICNPY-- 490 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~-a----Gaa~~L---~~allVNP~-- 490 (1460)
.+.+.+++. .+++.||++|..| |. .+..|++++ |.|+|+.-. . +.+..+ +.|+.+++.
T Consensus 284 ~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~-----G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~ 351 (402)
T 3ia7_A 284 EAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAA-----GVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQL 351 (402)
T ss_dssp EEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHT-----TCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGC
T ss_pred EEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHh-----CCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCC
Confidence 445888887 6799999999765 43 466999999 445564433 2 333333 237888876
Q ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 491 EIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 491 D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
+.++++++|.++|+++.. +.+++.+.+....
T Consensus 352 ~~~~l~~~~~~ll~~~~~--~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 352 EPASIREAVERLAADSAV--RERVRRMQRDILS 382 (402)
T ss_dssp SHHHHHHHHHHHHHCHHH--HHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCHHH--HHHHHHHHHHHhh
Confidence 889999999999986533 3334444444433
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.015 Score=61.94 Aligned_cols=65 Identities=18% Similarity=0.250 Sum_probs=28.8
Q ss_pred ccccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhH-HHHHHHHhcCCCceEEEEeCCc
Q psy775 14 FILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEET-KRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~-~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
+.-|||.+.+....--... ..--+++||+||||++.. ..+++.. .++++++... +..+..++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~m---~~~k~i~fDlDGTL~d~~-----~~~~~~~~~~~~~~~g~~-~~~~~~~~g~~ 69 (231)
T 3kzx_A 4 HHHHHMGTLEAQTQGPGSM---KQPTAVIFDWYNTLIDTS-----INIDRTTFYQVLDQMGYK-NIDLDSIPNST 69 (231)
T ss_dssp -----------------CC---CCCSEEEECTBTTTEETT-----SSCCHHHHHHHHHHTTCC-CCCCTTSCTTT
T ss_pred cccccccchhhcccCCCcc---CCCCEEEECCCCCCcCCc-----hhHHHHHHHHHHHHcCCC-HHHHHHHhCcc
Confidence 4567777766664332221 112378999999999743 2355666 6666666544 34455555655
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=0.021 Score=61.46 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=25.7
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.|++.+.|+.|+++ |++++|+|+++...+...+
T Consensus 107 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l 139 (240)
T 2no4_A 107 YPDAAETLEKLKSA-GYIVAILSNGNDEMLQAAL 139 (240)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHH
Confidence 37788889999988 8999999998765554443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.03 Score=61.72 Aligned_cols=49 Identities=22% Similarity=0.339 Sum_probs=38.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcC---CChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSG---R~~~~l~~~~ 1452 (1460)
+++||.||||..- -.+.|++.++|+++.++ |++++++|| |+...+.+.+
T Consensus 10 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~r~~~~~~~~l 61 (268)
T 3qgm_A 10 GYIIDIDGVIGKS------VTPIPEGVEGVKKLKEL-GKKIIFVSNNSTRSRRILLERL 61 (268)
T ss_dssp EEEEECBTTTEET------TEECHHHHHHHHHHHHT-TCEEEEEECCSSSCHHHHHHHH
T ss_pred EEEEcCcCcEECC------CEeCcCHHHHHHHHHHc-CCeEEEEeCcCCCCHHHHHHHH
Confidence 7999999999851 22567899999999887 689999999 6777665543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.11 Score=60.96 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=58.9
Q ss_pred EcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECCC--CH
Q psy775 422 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNPY--EI 492 (1460)
Q Consensus 422 ~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP~--D~ 492 (1460)
+.+.+++. .+++.||++|..+ |.| +..|++++ |.|+|+--..+ .+..+ +.|+.+++. ++
T Consensus 301 ~~~~~~~~---~ll~~ad~~v~~~---G~~-t~~Ea~~~-----G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~ 368 (415)
T 3rsc_A 301 AHRWVPHV---KVLEQATVCVTHG---GMG-TLMEALYW-----GRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADG 368 (415)
T ss_dssp EESCCCHH---HHHHHEEEEEESC---CHH-HHHHHHHT-----TCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCH
T ss_pred EEecCCHH---HHHhhCCEEEECC---cHH-HHHHHHHh-----CCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCH
Confidence 45888877 5688999998765 443 66899999 44556633322 23333 237888776 88
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 493 DAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 493 ~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
++++++|.++|+++.. +.+++.+.+.....+
T Consensus 369 ~~l~~~i~~ll~~~~~--~~~~~~~~~~~~~~~ 399 (415)
T 3rsc_A 369 DTLLAAVGAVAADPAL--LARVEAMRGHVRRAG 399 (415)
T ss_dssp HHHHHHHHHHHTCHHH--HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCHHH--HHHHHHHHHHHHhcC
Confidence 9999999999987543 333444444444333
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.033 Score=58.79 Aligned_cols=55 Identities=22% Similarity=0.349 Sum_probs=36.9
Q ss_pred EEEEecCCCCCC----CCCCCCCc-CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAP----IAPHPDMA-VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P~~a-~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+++||+||||.+ +.++++.. .....-..+|++|.+. +..++|+||++...+..++
T Consensus 28 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~~~~~~~~l 87 (188)
T 2r8e_A 28 LLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTS-DIEVAIITGRKAKLVEDRC 87 (188)
T ss_dssp EEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTT-TCEEEEECSSCCHHHHHHH
T ss_pred EEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHC-CCeEEEEeCCChHHHHHHH
Confidence 789999999998 44433311 1122223478888765 5799999999877665543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=94.11 E-value=0.05 Score=57.27 Aligned_cols=48 Identities=25% Similarity=0.332 Sum_probs=38.3
Q ss_pred EEEEecCCCCCCC---------CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCCh
Q psy775 1397 ALLLDYDGTLAPI---------APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 1445 (1460)
Q Consensus 1397 ~l~lD~DGTLapi---------~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~ 1445 (1460)
+++||+||||..- ........+.|++.++|++|.+. +.+++|+|+++.
T Consensus 5 ~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~ 61 (189)
T 3ib6_A 5 HVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTAT 61 (189)
T ss_dssp EEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSS
T ss_pred EEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 6899999999652 22234568889999999999886 579999999875
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.05 E-value=0.035 Score=62.34 Aligned_cols=62 Identities=29% Similarity=0.303 Sum_probs=44.3
Q ss_pred CCcEEEEEecCCCCCCCCC-----------CCC---------CcCCChhHHHHHHHHhcCCCceEEEEcCCC---hhhHH
Q psy775 1393 TNKLALLLDYDGTLAPIAP-----------HPD---------MAVLPEETKRTLQKLANLPDVHISIISGRN---VHNVM 1449 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLapi~~-----------~P~---------~a~~~~~~~~~L~~La~~~~~~vAvvSGR~---~~~l~ 1449 (1460)
...-+++||+||||..=.+ -++ ...+.|++.++|+.|.+. |++++|+|||+ ...+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCchhHHHHHH
Confidence 3455899999999986310 010 156778999999999876 57999999999 44444
Q ss_pred ---HhcCCC
Q psy775 1450 ---EMVGIE 1455 (1460)
Q Consensus 1450 ---~~~~~~ 1455 (1460)
+.+|++
T Consensus 136 ~~L~~~Gl~ 144 (258)
T 2i33_A 136 KNLERVGAP 144 (258)
T ss_dssp HHHHHHTCS
T ss_pred HHHHHcCCC
Confidence 344665
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=93.98 E-value=0.048 Score=58.30 Aligned_cols=35 Identities=6% Similarity=0.041 Sum_probs=28.6
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+-|++.+.|+.|+++ |++++|+||.+...+...+
T Consensus 92 ~~~~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~ 126 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIA 126 (232)
T ss_dssp GCCHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHH
Confidence 4578899999999999 9999999998765555544
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=93.67 E-value=0.039 Score=60.01 Aligned_cols=56 Identities=18% Similarity=0.278 Sum_probs=37.5
Q ss_pred EEEEecCCCcCCCCCC----CC-CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPH----PD-MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~----p~-~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++-... .. .....-.--.+|+.|+++ |++++|+||++...+...+.
T Consensus 51 ~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~-G~~l~I~T~~~~~~~~~~l~ 111 (211)
T 3ij5_A 51 LLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITS-DIDVAIITGRRAKLLEDRAN 111 (211)
T ss_dssp EEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHH
T ss_pred EEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHH
Confidence 8999999999973210 00 000111112279999999 99999999998777666654
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=93.27 E-value=0.055 Score=55.24 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=33.9
Q ss_pred EEEEecCCCCCCCC----CCCC-CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIA----PHPD-MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~----~~P~-~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+++||+||||.+-. .... .......-..+|+.|.++ +.+++|+||++...+...
T Consensus 6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~ 64 (164)
T 3e8m_A 6 LILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRR 64 (164)
T ss_dssp EEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHH
T ss_pred EEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHH
Confidence 68999999999821 1111 111111122357777765 568999999997665543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.13 E-value=0.049 Score=60.04 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=38.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcC---CChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSG---R~~~~l~~~~ 1452 (1460)
+++||+||||..- -.+.+++.++|+++.++ |++++++|| |+...+.+.+
T Consensus 8 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r~~~~~~~~l 59 (266)
T 3pdw_A 8 GYLIDLDGTMYNG------TEKIEEACEFVRTLKDR-GVPYLFVTNNSSRTPKQVADKL 59 (266)
T ss_dssp EEEEECSSSTTCH------HHHHHHHHHHHHHHHHT-TCCEEEEESCCSSCHHHHHHHH
T ss_pred EEEEeCcCceEeC------CEeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHH
Confidence 7899999999641 23557899999999887 679999988 7776665543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=93.04 E-value=0.081 Score=56.31 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=28.1
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.++|+.|+++ |++++|+||.+...+...+
T Consensus 86 ~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l 120 (225)
T 1nnl_A 86 HLTPGIRELVSRLQER-NVQVFLISGGFRSIVEHVA 120 (225)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH
T ss_pred CCCccHHHHHHHHHHC-CCcEEEEeCChHHHHHHHH
Confidence 4567889999999998 9999999998766555444
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=93.02 E-value=0.03 Score=58.66 Aligned_cols=52 Identities=21% Similarity=0.193 Sum_probs=33.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhH-------HHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEET-------KRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~-------~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+++||+||||+. ............ ..+|+.|.++ +.+++|+||++...+...
T Consensus 14 ~vifD~DGTL~d--~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~ 72 (176)
T 3mmz_A 14 AVVLDFDGTQTD--DRVLIDSDGREFVSVHRGDGLGIAALRKS-GLTMLILSTEQNPVVAAR 72 (176)
T ss_dssp EEEECCTTTTSC--SCCEECTTCCEEEEEEHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHH
T ss_pred EEEEeCCCCcCc--CCEeecCCccHhHhcccccHHHHHHHHHC-CCeEEEEECcChHHHHHH
Confidence 799999999998 222111111111 1147777665 579999999987666544
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=92.87 E-value=0.07 Score=62.69 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=36.7
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++.-+++||+||||..- . .+-|++.++|+.|+++ |.+++++|+.+
T Consensus 11 ~~~~~~l~D~DGvl~~g-----~-~~~p~a~~~l~~l~~~-g~~~~~vTNn~ 55 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRG-----K-KPIAGASDALKLLNRN-KIPYILLTNGG 55 (352)
T ss_dssp -CCEEEEECCBTTTEET-----T-EECTTHHHHHHHHHHT-TCCEEEECSCC
T ss_pred ccCCEEEEECCCeeEcC-----C-eeCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 35668999999999862 2 2446899999999999 99999999754
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=92.86 E-value=0.51 Score=60.45 Aligned_cols=101 Identities=16% Similarity=0.188 Sum_probs=70.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..++.+.-++.++ -+.-++.+.++|++-|+. +|+....+. ..- +.+.+.+.+- |-. -.
T Consensus 521 ~~~v~f~~fN~~~Ki--~p~~~~~W~~IL~~vP~S----~L~Ll~~~~----~~~----~~l~~~~~~~----gi~-~~- 580 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKI--DPSTLQMWANILKRVPNS----VLWLLRFPA----VGE----PNIQQYAQNM----GLP-QN- 580 (723)
T ss_dssp TTSEEEECCSCGGGC--CHHHHHHHHHHHHHCSSE----EEEEEETTG----GGH----HHHHHHHHHT----TCC-GG-
T ss_pred CCCEEEEeCCccccC--CHHHHHHHHHHHHhCCCC----eEEEEeCcH----HHH----HHHHHHHHhc----CCC-cC-
Confidence 566777777777665 588899999999999985 344444332 111 2233333322 211 12
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
.+.|.+..+.++..+.|+.+||++.|.-+-| +.+..|++.+
T Consensus 581 r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~ 621 (723)
T 4gyw_A 581 RIIFSPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA 621 (723)
T ss_dssp GEEEEECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT
T ss_pred eEEECCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc
Confidence 2455667899999999999999999999988 7888999987
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=92.86 E-value=0.063 Score=59.35 Aligned_cols=50 Identities=22% Similarity=0.386 Sum_probs=40.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~~ 1453 (1460)
+++||.||||..- + -.+ |++.++|+++.+. |++++++| ||+...+...+.
T Consensus 7 li~~DlDGTLl~~----~-~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~~~~~~~~l~ 59 (264)
T 3epr_A 7 GYLIDLDGTIYKG----K-SRI-PAGERFIERLQEK-GIPYMLVTNNTTRTPESVQEMLR 59 (264)
T ss_dssp EEEECCBTTTEET----T-EEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHH
T ss_pred EEEEeCCCceEeC----C-EEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHH
Confidence 7899999999752 2 344 7999999999876 67999999 898888776653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=92.84 E-value=0.034 Score=59.28 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=22.9
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
.|++.+.|+.|+++ |++++|+|+.+...+...
T Consensus 97 ~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~ 128 (232)
T 1zrn_A 97 FSEVPDSLRELKRR-GLKLAILSNGSPQSIDAV 128 (232)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred CccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHH
Confidence 36777888888887 888888888765544433
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=92.74 E-value=0.043 Score=57.63 Aligned_cols=35 Identities=9% Similarity=0.054 Sum_probs=27.7
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.+++.+.|+.|+++ |++++|+|+.+...+...+
T Consensus 70 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l 104 (205)
T 3m9l_A 70 RPAPGAVELVRELAGR-GYRLGILTRNARELAHVTL 104 (205)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred CCCccHHHHHHHHHhc-CCeEEEEeCCchHHHHHHH
Confidence 4566788999999998 8999999998766555444
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=92.59 E-value=1.7 Score=55.88 Aligned_cols=142 Identities=11% Similarity=0.083 Sum_probs=95.9
Q ss_pred HHhhCCcCCCCCCEEEEEEcCccccCCHHHH-HHHHHHHH--HhCCCCCC-CEEEEEEEcCCCCChhHHHHHHHHHHHHH
Q psy775 729 LAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR-LKAFETLL--EKHPEHLE-KVTLLQIAVPSRTDVKEYQDLKEEMDQLV 804 (1460)
Q Consensus 729 l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~k-L~Afe~fL--~~~P~~~~-kVvLvqi~~psr~~~~~y~~l~~el~~lv 804 (1460)
|+++....+.++..+++.|-|+..-||..+. |...++++ .++|+.-= .+++|..|.+..++ .....+.+.+..++
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va 616 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIG 616 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHH
Confidence 3343444455678899999999999999998 89999886 36775311 35677666655443 23345667788888
Q ss_pred HHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 805 GRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 805 ~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
..+|..=.-.+.-.|+++. ..+-+---.+|.+||+.+.||+ .|.-|+.-+=||. .|.+-+|-.-|+.
T Consensus 617 ~~in~Dp~v~~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKaml------NGaLtigtlDGan 685 (824)
T 2gj4_A 617 DVVNHDPVVGDRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFML------NGALTIGTMDGAN 685 (824)
T ss_dssp HHHTTCTTTGGGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHH------TTCEEEECSCTTH
T ss_pred HHhccCcccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH------cCceEEEEecCcc
Confidence 8887642212222355554 4455444557999999999999 8888887777765 4666777655544
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=92.45 E-value=0.092 Score=57.78 Aligned_cols=49 Identities=16% Similarity=0.223 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~ 1452 (1460)
++++|+||||..= ..+.+.+.+++++|.+. |++++++| ||+...+.+.+
T Consensus 19 ~v~~DlDGTLl~~------~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~~~~~~~~~ 70 (271)
T 1vjr_A 19 LFILDMDGTFYLD------DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKL 70 (271)
T ss_dssp EEEECCBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHH
T ss_pred EEEEcCcCcEEeC------CEECcCHHHHHHHHHHc-CCeEEEEECCCCCCHHHHHHHH
Confidence 6999999999852 33567889999998876 67999999 99988876543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=92.42 E-value=0.092 Score=54.91 Aligned_cols=48 Identities=23% Similarity=0.281 Sum_probs=39.7
Q ss_pred cEEEEEecCCCCCC------CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1395 KLALLLDYDGTLAP------IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1395 ~~~l~lD~DGTLap------i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
.-+++||.||||.. ....++...+.|++.++|+.|.+. +.+++|+|+.
T Consensus 14 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 14 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp CEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred CcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 44789999999964 344456788899999999999876 6799999997
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.35 E-value=0.11 Score=55.14 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=37.2
Q ss_pred EEEEecCCCCCC---CCCC--CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCCC
Q psy775 1397 ALLLDYDGTLAP---IAPH--PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLap---i~~~--P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~~ 1456 (1460)
+++||+||||.+ ..+. +........-..+|+.|.+. +.+++|+||++...+... +|++.
T Consensus 21 ~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~~~~~~~~l~~lgl~~ 87 (191)
T 3n1u_A 21 CLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAA-GIQVAIITTAQNAVVDHRMEQLGITH 87 (191)
T ss_dssp EEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHT-TCEEEEECSCCSHHHHHHHHHHTCCE
T ss_pred EEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHC-CCeEEEEeCcChHHHHHHHHHcCCcc
Confidence 788999999998 3322 11122222222248888765 579999999997665544 45543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=92.32 E-value=0.13 Score=54.22 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=22.6
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
.+.+++.++|+.|+++ |++++|+|+.+...+...
T Consensus 96 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~ 129 (230)
T 3um9_A 96 TPFADVPQALQQLRAA-GLKTAILSNGSRHSIRQV 129 (230)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred CCCCCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHH
Confidence 3456677777777777 777788877765444433
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=92.18 E-value=0.12 Score=60.26 Aligned_cols=85 Identities=9% Similarity=0.003 Sum_probs=52.4
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE----cCCCCch--hccc---ccEEECCC
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV----SPFAGAG--EQMH---EALICNPY 490 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl----Se~aGaa--~~L~---~allVNP~ 490 (1460)
+.+.++++..+ +++.||++|.. |-..+..|||+| |.|+|+ .+-.+.+ +.+. .|+.+++.
T Consensus 285 v~~~~~~~~~~---ll~~ad~~v~~----~G~~t~~Eal~~-----G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRAVGWTPLHT---LLRTCTAVVHH----GGGGTVMTAIDA-----GIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEEESSCCHHH---HHTTCSEEEEC----CCHHHHHHHHHH-----TCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEEEccCCHHH---HHhhCCEEEEC----CCHHHHHHHHHh-----CCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 34458887665 47789999853 333578999999 455566 4555666 6663 38888876
Q ss_pred --CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 491 --EIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 491 --D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
+.+.++ ++|+++... .+++...+.+.
T Consensus 353 ~~~~~~l~----~ll~~~~~~--~~~~~~~~~~~ 380 (398)
T 3oti_A 353 KVDADLLR----RLIGDESLR--TAAREVREEMV 380 (398)
T ss_dssp GCCHHHHH----HHHHCHHHH--HHHHHHHHHHH
T ss_pred CCCHHHHH----HHHcCHHHH--HHHHHHHHHHH
Confidence 445554 677654333 33344444443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=92.14 E-value=0.16 Score=54.48 Aligned_cols=54 Identities=22% Similarity=0.359 Sum_probs=37.0
Q ss_pred EEEEecCCCCCC---CCC-C-CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAP---IAP-H-PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLap---i~~-~-P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+++||+||||.. ... + ++.......-..+|+.|.+. +++++|+||++...+..+
T Consensus 27 ~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~~~~~~~~ 85 (195)
T 3n07_A 27 LLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNA-GIEIAIITGRRSQIVENR 85 (195)
T ss_dssp EEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHH
T ss_pred EEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHC-CCEEEEEECcCHHHHHHH
Confidence 799999999998 221 1 22233333444568888765 579999999988766544
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=92.08 E-value=0.11 Score=62.13 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=37.5
Q ss_pred EEEEecCCCCCC------CCCCCCCcC-CChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP------IAPHPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~a~-~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||+||||.. ...++++-. +.|++.++|+.|.+. +.+++|+|+++
T Consensus 60 ~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 60 VAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp EEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred EEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 799999999974 334454433 789999999999876 57999999976
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=91.88 E-value=0.13 Score=59.39 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=29.8
Q ss_pred ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 59 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 59 a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..+.|++.+.|+.|+++ |++++|+||.+...+...+
T Consensus 178 ~~l~pg~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l 213 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAK-GFKTAIISGGLDIFTQRLK 213 (317)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhC-CCEEEEEeCccHHHHHHHH
Confidence 45678899999999999 9999999998766655554
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=91.80 E-value=0.14 Score=56.18 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=28.8
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.++|+.|+++ |++++|+||++...+...+
T Consensus 144 ~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~ 178 (280)
T 3skx_A 144 RIRPESREAISKLKAI-GIKCMMLTGDNRFVAKWVA 178 (280)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred CCCHhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHH
Confidence 4568899999999998 9999999999876665554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=91.65 E-value=0.15 Score=54.02 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=24.3
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+.+++.++|+.|+++ |++++|+|+.+...+...+
T Consensus 100 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l 133 (233)
T 3umb_A 100 AFPENVPVLRQLREM-GLPLGILSNGNPQMLEIAV 133 (233)
T ss_dssp ECTTHHHHHHHHHTT-TCCEEEEESSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHhC-CCcEEEEeCCCHHHHHHHH
Confidence 346677788888887 8888888887765554443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=91.53 E-value=0.34 Score=57.60 Aligned_cols=92 Identities=9% Similarity=0.052 Sum_probs=53.8
Q ss_pred CEEEEEEcCcccc-----CCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 741 QKIVLGVDRLDYT-----KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 741 kkiIl~VdRLd~~-----KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
..|+++.|++... |++...++|+.++ ++ .++.++.+. +. +++. .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~~--~~-------~~l~--------~----- 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDAQ--QL-------EGVA--------N----- 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCTT--TT-------SSCS--------S-----
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECCc--ch-------hhhc--------c-----
Confidence 5688999999764 8888888887542 22 233222211 10 0010 0
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
..+-+.+.+.+++.+ +|..||++|. +.|. .+..|++++ +-|+|+..+.
T Consensus 317 ~~~~v~~~~~~~~~~---ll~~ad~~V~---~~G~-~t~~Ea~~~-----G~P~i~~p~~ 364 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHA---LLPTCAATVH---HGGP-GSWHTAAIH-----GVPQVILPDG 364 (441)
T ss_dssp CCSSEEECCSCCHHH---HGGGCSEEEE---CCCH-HHHHHHHHT-----TCCEEECCCS
T ss_pred CCCCEEEecCCCHHH---HHhhCCEEEE---CCCH-HHHHHHHHh-----CCCEEEeCCc
Confidence 112256778898755 4799999996 4454 578999998 6788888874
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=91.15 E-value=0.13 Score=53.54 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=24.1
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
+.+++.+.|+.|+++ |++++|+||.+...+...
T Consensus 83 ~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~ 115 (219)
T 3kd3_A 83 LTDGIKELVQDLKNK-GFEIWIFSGGLSESIQPF 115 (219)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHH
T ss_pred CChhHHHHHHHHHHC-CCeEEEEcCCcHHHHHHH
Confidence 556778888888888 888888888765544433
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=91.13 E-value=0.064 Score=58.13 Aligned_cols=35 Identities=14% Similarity=-0.150 Sum_probs=27.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceE
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHI 80 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v 80 (1460)
+++||+||||++. ...+.+...++++.+++. |..+
T Consensus 15 ~iifDlDGTL~d~-----~~~~~~~~~~~~~~l~~~-g~~~ 49 (251)
T 2pke_A 15 LVGFDGDDTLWKS-----EDYYRTAEADFEAILSGY-LDLG 49 (251)
T ss_dssp EEEECCBTTTBCC-----HHHHHHHHHHHHHHHTTT-CCC-
T ss_pred EEEEeCCCCCccC-----cHhHHHHHHHHHHHHHHh-CCch
Confidence 7999999999973 334667788888888887 8765
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=91.02 E-value=0.1 Score=55.99 Aligned_cols=48 Identities=21% Similarity=0.335 Sum_probs=39.3
Q ss_pred EEEEecCCCCCCC---CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCCh
Q psy775 1397 ALLLDYDGTLAPI---APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 1445 (1460)
Q Consensus 1397 ~l~lD~DGTLapi---~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~ 1445 (1460)
++++|.||||..- ..+++...+.|++.++|++|.++ +.+++|+|+++.
T Consensus 33 ~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 33 ALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSG 83 (218)
T ss_dssp CEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHH
T ss_pred EEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCC
Confidence 5889999999753 33455677889999999999875 568999999987
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=90.96 E-value=0.097 Score=54.48 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=12.3
Q ss_pred EEEEecCCCcCCCC
Q psy775 40 ALLLDYDGTLAPIA 53 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~ 53 (1460)
+++||+||||++..
T Consensus 9 ~viFDlDGTL~d~~ 22 (206)
T 2b0c_A 9 LYIFDLGNVIVDID 22 (206)
T ss_dssp EEEECCBTTTEEEE
T ss_pred EEEEcCCCeeecCc
Confidence 89999999999753
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=90.94 E-value=0.56 Score=54.18 Aligned_cols=43 Identities=19% Similarity=0.034 Sum_probs=32.3
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
+.+.+.+++. .++..||++|..+ |. .+..|++++ +.|+|+...
T Consensus 283 v~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~-----G~P~v~~p~ 325 (402)
T 3ia7_A 283 VEAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAA-----GVPLVLVPH 325 (402)
T ss_dssp EEEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHT-----TCCEEECGG
T ss_pred EEEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHh-----CCCEEEeCC
Confidence 5567788876 7788999988765 33 456999998 667777654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=90.94 E-value=0.2 Score=54.47 Aligned_cols=13 Identities=46% Similarity=0.744 Sum_probs=11.8
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 16 ~i~fDlDGTL~d~ 28 (277)
T 3iru_A 16 ALILDWAGTTIDF 28 (277)
T ss_dssp EEEEESBTTTBST
T ss_pred EEEEcCCCCcccC
Confidence 7999999999983
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=90.90 E-value=0.22 Score=52.20 Aligned_cols=35 Identities=14% Similarity=0.023 Sum_probs=25.5
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.+.|+.|+++ |++++|+|+.+...+...+
T Consensus 75 ~~~~~~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l 109 (217)
T 3m1y_A 75 PLFEGALELVSALKEK-NYKVVCFSGGFDLATNHYR 109 (217)
T ss_dssp CBCBTHHHHHHHHHTT-TEEEEEEEEEEHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHC-CCEEEEEcCCchhHHHHHH
Confidence 3566788888888888 8888888887654444333
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.61 E-value=0.21 Score=53.00 Aligned_cols=49 Identities=12% Similarity=0.272 Sum_probs=36.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~ 1452 (1460)
+++||+||||..- ....++. .++++.+.++ +.++.++| ||+..++.+.+
T Consensus 5 ~i~fDlDGTLl~~-----~~~~~~~-~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~ 56 (250)
T 2c4n_A 5 NVICDIDGVLMHD-----NVAVPGA-AEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRF 56 (250)
T ss_dssp EEEEECBTTTEET-----TEECTTH-HHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHH
T ss_pred EEEEcCcceEEeC-----CEeCcCH-HHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHH
Confidence 6899999999852 1234445 7778777665 56788999 99988877654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.59 E-value=0.22 Score=53.86 Aligned_cols=53 Identities=11% Similarity=0.188 Sum_probs=39.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~ 1452 (1460)
+++||+||||..=. +..-.+.+....+++.+.++ |+++.++| ||+...+.+.+
T Consensus 14 ~i~fDlDGTLl~s~--~~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~~~~~~~~l 69 (271)
T 2x4d_A 14 GVLLDISGVLYDSG--AGGGTAIAGSVEAVARLKRS-RLKVRFCTNESAASRAELVGQL 69 (271)
T ss_dssp EEEECCBTTTEECC--TTTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSCHHHHHHHH
T ss_pred EEEEeCCCeEEecC--CCCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCCHHHHHHHH
Confidence 78999999998621 11233566788888888775 67999999 99988776654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=90.52 E-value=0.25 Score=54.60 Aligned_cols=34 Identities=6% Similarity=0.054 Sum_probs=23.8
Q ss_pred cCChhHHHHHHHHhcCCCc--eEEEEeCCchhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDV--HISIISGRNVHNVMEM 94 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~--~v~IvTGR~~~~l~~~ 94 (1460)
.+.|++.++|+.|+++ |+ +++|+|+.+...+...
T Consensus 142 ~~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~ 177 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRC 177 (282)
T ss_dssp CCCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHHHH
T ss_pred CcChhHHHHHHHHHhC-CCCceEEEEECCChHHHHHH
Confidence 3566777888888877 77 8888888765544433
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=90.38 E-value=0.59 Score=55.00 Aligned_cols=121 Identities=12% Similarity=0.130 Sum_probs=75.2
Q ss_pred CCeEEEEecCc-cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCccc
Q psy775 340 KQKIVLGVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418 (1460)
Q Consensus 340 ~~kvIL~VgRL-d~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~p 418 (1460)
...++++.|++ ++.|.+..+++|++++ + . ++ +++++... .. . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~--~~-v~~~g~~~-~~------~--------~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-R--RV-ILSRGWAD-LV------L--------PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-C--CE-EECTTCTT-CC------C--------SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-C--eE-EEEeCCCc-cc------c--------cCCC--------CC
Confidence 35688899999 6888888888888664 2 2 22 22222111 00 0 0000 12
Q ss_pred EEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECCC-
Q psy775 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNPY- 490 (1460)
Q Consensus 419 Iv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP~- 490 (1460)
+.+.+.+++.++ +..||++|.. -|. .+..|+++| |.|+|+--..+ .+..+ +.|+.+++.
T Consensus 287 -v~~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~-----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~ 353 (415)
T 1iir_A 287 -CFAIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARA-----GAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (415)
T ss_dssp -EEECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHH-----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred -EEEeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHc-----CCCEEECCCCCccHHHHHHHHHCCCcccCCcCC
Confidence 345688998765 6999999974 354 578999999 45557665543 22333 337888764
Q ss_pred -CHHHHHHHHHHHcCC
Q psy775 491 -EIDAAAEVIHRALTM 505 (1460)
Q Consensus 491 -D~~elA~AI~~aL~m 505 (1460)
+.++++++|.++ ++
T Consensus 354 ~~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 354 PTFDSLSAALATA-LT 368 (415)
T ss_dssp CCHHHHHHHHHHH-TS
T ss_pred CCHHHHHHHHHHH-cC
Confidence 789999999999 65
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=90.37 E-value=0.34 Score=52.42 Aligned_cols=49 Identities=20% Similarity=0.360 Sum_probs=35.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~ 1452 (1460)
+++||+||||..= -...+...++++.+.++ |++++++| ||+...+.+.+
T Consensus 9 ~i~fDlDGTLld~------~~~~~~~~~ai~~l~~~-G~~~~~~t~~~~~~~~~~~~~l 60 (259)
T 2ho4_A 9 AVLVDLNGTLHIE------DAAVPGAQEALKRLRAT-SVMVRFVTNTTKETKKDLLERL 60 (259)
T ss_dssp EEEEESSSSSCC---------CCTTHHHHHHHHHTS-SCEEEEEECCSSCCHHHHHHHH
T ss_pred EEEEeCcCcEEeC------CEeCcCHHHHHHHHHHC-CCeEEEEeCCCCcCHHHHHHHH
Confidence 7999999999961 12235678888888876 57899999 77766665544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=90.27 E-value=0.31 Score=54.83 Aligned_cols=49 Identities=29% Similarity=0.387 Sum_probs=39.4
Q ss_pred EEEEEecCCCcCCCCCCC-------CCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 39 LALLLDYDGTLAPIAPHP-------DMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p-------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
-.+.+|+|||+......- ....+-|++.++|+.|+++ |++++|+|||+.
T Consensus 160 ~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-g~~~~v~T~k~~ 215 (301)
T 1ltq_A 160 KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRES 215 (301)
T ss_dssp EEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSCC
T ss_pred ceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 577899999998764321 1234579999999999999 999999999984
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=90.24 E-value=0.22 Score=52.33 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=27.1
Q ss_pred CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhH
Q psy775 1415 MAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 1448 (1460)
Q Consensus 1415 ~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l 1448 (1460)
...+.|++.++|++|.+..+.+++|+|+++...+
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~ 104 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYH 104 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCT
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhH
Confidence 4456789999999998764579999999976543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=90.21 E-value=0.032 Score=59.14 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+++||+||||++. ...+++...++++.+.++ +..+..+|||....+...+
T Consensus 4 ~i~fDlDGTL~~~-----~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 53 (230)
T 3vay_A 4 LVTFDLDDTLWDT-----APAIVGAEAALRDWLAEQ-APKLGPVPVEHLWEIRSRL 53 (230)
T ss_dssp EEEECCBTTTBCS-----HHHHHHHHHHHHHHHHHH-CTTTCSCCHHHHHHHHHHH
T ss_pred EEEecCcccCcCC-----chHHHHHHHHHHHHHHHh-cCcchhhHHHHHHHHHHHH
Confidence 7899999999973 234667778889999888 6777788888876655443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=90.11 E-value=0.24 Score=53.83 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=12.1
Q ss_pred EEEEecCCCcCCCC
Q psy775 40 ALLLDYDGTLAPIA 53 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~ 53 (1460)
+++||+||||++..
T Consensus 4 ~viFDlDGTL~d~~ 17 (253)
T 1qq5_A 4 AVVFDAYGTLFDVQ 17 (253)
T ss_dssp EEEECTBTTTBCTT
T ss_pred EEEEeCCCCCCccH
Confidence 78999999999753
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=90.07 E-value=0.09 Score=59.30 Aligned_cols=53 Identities=13% Similarity=0.076 Sum_probs=40.4
Q ss_pred CCcEEEEEecCCCCCCCCC------------C---------CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1393 TNKLALLLDYDGTLAPIAP------------H---------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLapi~~------------~---------P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
..+.+++||+||||+.=.+ + -..+.+-|++.+.|+.|.++ |+.++|||||+-.
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~ 129 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDD 129 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETT
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 3456999999999986320 1 13467788999999999876 6799999999754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=89.93 E-value=1.2 Score=51.97 Aligned_cols=43 Identities=19% Similarity=0.113 Sum_probs=31.4
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
+.+.+.+++. .++..||++|..+ |. .+..|++++ +.|+|+-..
T Consensus 299 v~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~-----G~P~v~~p~ 341 (415)
T 3rsc_A 299 VEAHRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYW-----GRPLVVVPQ 341 (415)
T ss_dssp EEEESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHT-----TCCEEECCC
T ss_pred EEEEecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHh-----CCCEEEeCC
Confidence 4556888876 6788899988765 44 356899998 567777554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=89.70 E-value=0.24 Score=55.11 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=38.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcC---CChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSG---R~~~~l~~~~ 1452 (1460)
+++||+||||..- ..+.+++.++|++|.+. +.+++++|| |+...+.+.+
T Consensus 16 ~i~~D~DGtL~~~------~~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r~~~~~~~~l 67 (284)
T 2hx1_A 16 CIFFDAFGVLKTY------NGLLPGIENTFDYLKAQ-GQDYYIVTNDASRSPEQLADSY 67 (284)
T ss_dssp EEEECSBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHH
T ss_pred EEEEcCcCCcCcC------CeeChhHHHHHHHHHHC-CCEEEEEeCCCCcCHHHHHHHH
Confidence 7899999999862 22457888999999876 679999995 8877766543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=89.70 E-value=0.091 Score=59.29 Aligned_cols=53 Identities=11% Similarity=0.084 Sum_probs=42.2
Q ss_pred CCcEEEEEecCCCCCCCCC------------CC---------CCcCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1393 TNKLALLLDYDGTLAPIAP------------HP---------DMAVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLapi~~------------~P---------~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
..+.+++||+||||+.-.+ ++ ..+.+-|++.+.|+.|.++ ++.++|||||+..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~ 129 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDS 129 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETT
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 4577999999999997542 11 2567778999999999876 6799999999864
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=89.63 E-value=0.22 Score=52.57 Aligned_cols=59 Identities=27% Similarity=0.293 Sum_probs=35.3
Q ss_pred EEEEecCCCCCCCCC--CCCCc---CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCCC
Q psy775 1397 ALLLDYDGTLAPIAP--HPDMA---VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~--~P~~a---~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~~ 1456 (1460)
+++||+||||..=.. .+... ...-.-..+|+.|.++ +.+++|+||++...+... +|+..
T Consensus 21 ~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~lgl~~ 87 (189)
T 3mn1_A 21 LAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIAS-GVTTAIISGRKTAIVERRAKSLGIEH 87 (189)
T ss_dssp EEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHHTCSE
T ss_pred EEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHC-CCEEEEEECcChHHHHHHHHHcCCHH
Confidence 789999999986211 11100 0011111277888765 579999999997665544 45543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=89.34 E-value=0.41 Score=49.32 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=19.9
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
+.+++.+.|+.|+++ |++++|+|+.+...+...
T Consensus 90 ~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~ 122 (214)
T 3e58_A 90 IFPDVLKVLNEVKSQ-GLEIGLASSSVKADIFRA 122 (214)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred cCchHHHHHHHHHHC-CCCEEEEeCCcHHHHHHH
Confidence 345566666677666 667777776655444433
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=89.17 E-value=0.47 Score=50.00 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=24.5
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
.+-|++.++|+.|+++.|++++|+|+++...
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~ 105 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMF 105 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccch
Confidence 4557889999999876468999999987544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=88.98 E-value=0.29 Score=55.30 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=43.5
Q ss_pred hhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhc
Q psy775 1380 EDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 1452 (1460)
Q Consensus 1380 ~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~ 1452 (1460)
+++.+++... + ++++|.||||..- ..+.+.+.++|++|.+. +.+++++| ||+...+...+
T Consensus 12 ~~~~~~~~~~-----k-~i~~D~DGTL~~~------~~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~~~~~~~~~ 74 (306)
T 2oyc_A 12 AALRDVLGRA-----Q-GVLFDCDGVLWNG------ERAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRF 74 (306)
T ss_dssp HHHHHHHHHC-----S-EEEECSBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHH
T ss_pred HHHHHHHhhC-----C-EEEECCCCcEecC------CccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHH
Confidence 4455555542 2 7999999999751 23567889999999876 57999999 68887775443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=88.81 E-value=0.22 Score=52.51 Aligned_cols=12 Identities=42% Similarity=0.841 Sum_probs=10.9
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 8 ~i~fDlDGTL~~ 19 (233)
T 3s6j_A 8 SFIFDLDGTLTD 19 (233)
T ss_dssp EEEECCBTTTEE
T ss_pred EEEEcCCCcccc
Confidence 789999999986
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=88.32 E-value=0.2 Score=51.51 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=22.7
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
.+.|++.+.|+.|+++ |++++|+||.+...+
T Consensus 79 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~ 109 (201)
T 4ap9_A 79 NVSPEARELVETLREK-GFKVVLISGSFEEVL 109 (201)
T ss_dssp CCCHHHHHHHHHHHHT-TCEEEEEEEEETTTS
T ss_pred CCChhHHHHHHHHHHC-CCeEEEEeCCcHHHH
Confidence 4566777888888888 888888888654433
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=87.96 E-value=0.024 Score=59.05 Aligned_cols=39 Identities=23% Similarity=0.367 Sum_probs=25.8
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchh
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 89 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~ 89 (1460)
-+++||+||||++. .+.+++.+.... +..+..+|||...
T Consensus 6 k~i~fDlDGTL~d~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~ 44 (211)
T 1l7m_A 6 KLILFDFDSTLVNN-----------ETIDEIAREAGV-EEEVKKITKEAME 44 (211)
T ss_dssp EEEEEECCCCCBSS-----------CHHHHHHHHTTC-HHHHHHHHHHHHT
T ss_pred cEEEEeCCCCCCCc-----------cHHHHHHHHhCc-HHHHHHHHHHHHc
Confidence 37999999999973 123566665554 4455667887543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=87.94 E-value=0.55 Score=49.81 Aligned_cols=13 Identities=54% Similarity=0.797 Sum_probs=11.6
Q ss_pred EEEEEecCCCcCC
Q psy775 39 LALLLDYDGTLAP 51 (1460)
Q Consensus 39 ~~lFfDiDGTL~~ 51 (1460)
-+++||+||||++
T Consensus 20 k~i~fDlDGTL~d 32 (237)
T 4ex6_A 20 RGVILDLDGTLAD 32 (237)
T ss_dssp EEEEECSBTTTBC
T ss_pred CEEEEcCCCCCcC
Confidence 3899999999986
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.83 E-value=0.16 Score=53.82 Aligned_cols=46 Identities=20% Similarity=0.178 Sum_probs=29.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH-hcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL-ANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L-~~~~g~~v~IvTGR~~~~ 90 (1460)
+++||+||||++. .....+...++++++ .......+..++||+...
T Consensus 6 ~iifDlDGTL~d~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 52 (234)
T 2hcf_A 6 LVLFDIDGTLLKV-----ESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGA 52 (234)
T ss_dssp EEEECCBTTTEEE-----CTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHH
T ss_pred EEEEcCCCCcccC-----ccchHHHHHHHHHHHhCCCCccchhhhcCCChHH
Confidence 7899999999973 223456677788774 333223566789998665
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=87.64 E-value=0.2 Score=52.27 Aligned_cols=14 Identities=29% Similarity=0.311 Sum_probs=11.9
Q ss_pred EEEEecCCCcCCCC
Q psy775 40 ALLLDYDGTLAPIA 53 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~ 53 (1460)
+++||+||||++..
T Consensus 3 ~iiFDlDGTL~d~~ 16 (201)
T 2w43_A 3 ILAFDIFGTVLDTS 16 (201)
T ss_dssp EEEECCBTTTEEGG
T ss_pred EEEEeCCCceecch
Confidence 68999999999843
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.54 E-value=0.26 Score=52.02 Aligned_cols=12 Identities=33% Similarity=0.534 Sum_probs=11.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 7 ~i~fDlDGTL~d 18 (240)
T 3qnm_A 7 NLFFDLDDTIWA 18 (240)
T ss_dssp EEEECCBTTTBC
T ss_pred EEEEcCCCCCcC
Confidence 789999999986
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=87.41 E-value=1.6 Score=51.28 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=58.8
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECCC--C
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNPY--E 491 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP~--D 491 (1460)
.+.+.+++. .+|+.||++|.. -|. .+..|++++ |.|+|+.-..+ .+..+ +-|+.+++. +
T Consensus 308 ~~~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~-----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~ 375 (424)
T 2iya_A 308 EVHQWVPQL---DILTKASAFITH---AGM-GSTMEALSN-----AVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVT 375 (424)
T ss_dssp EEESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHT-----TCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCC
T ss_pred EEecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHc-----CCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCC
Confidence 345888876 469999998864 343 578999999 45557766532 12222 237888765 7
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 492 IDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 492 ~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
.++++++|.++|+++. .+.+++.+.+.+..
T Consensus 376 ~~~l~~~i~~ll~~~~--~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 376 AEKLREAVLAVASDPG--VAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHHHHHHHHCHH--HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCHH--HHHHHHHHHHHHHh
Confidence 8999999999998543 33344454444443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.37 E-value=0.49 Score=50.97 Aligned_cols=12 Identities=42% Similarity=0.684 Sum_probs=11.2
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 32 ~i~fDlDGTL~d 43 (250)
T 3l5k_A 32 HLIFDMDGLLLD 43 (250)
T ss_dssp EEEEETBTTTBC
T ss_pred EEEEcCCCCcCC
Confidence 799999999996
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=87.04 E-value=0.24 Score=52.96 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=23.7
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+.|++.+.|+.|+++ |++++|+|+.+...+...+
T Consensus 111 ~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l 144 (240)
T 3sd7_A 111 IYENMKEILEMLYKN-GKILLVATSKPTVFAETIL 144 (240)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH
T ss_pred cCccHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHH
Confidence 455667788888887 8888888887655444433
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=86.78 E-value=0.094 Score=56.76 Aligned_cols=50 Identities=20% Similarity=0.333 Sum_probs=35.4
Q ss_pred EEEEEecCCCCCCCCC---------CCC--------------------CcCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1396 LALLLDYDGTLAPIAP---------HPD--------------------MAVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~---------~P~--------------------~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
-+++||+||||..-.+ .+. ...+.+++.+.|++|.++ +.+++|+||++..
T Consensus 38 kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~-G~~l~ivTn~~~~ 116 (211)
T 2b82_A 38 MAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR-GDAIFFVTGRSPT 116 (211)
T ss_dssp CEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH-TCEEEEEECSCCC
T ss_pred CEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC-CCEEEEEcCCcHH
Confidence 3789999999997321 010 012356888999999765 5799999999743
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=86.46 E-value=0.44 Score=50.83 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=17.5
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
.|++.++|+.|+++ |++++|+|+.+...+
T Consensus 85 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~ 113 (222)
T 2nyv_A 85 YPEIPYTLEALKSK-GFKLAVVSNKLEELS 113 (222)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHH
T ss_pred CCCHHHHHHHHHHC-CCeEEEEcCCCHHHH
Confidence 45556666666666 666666666554333
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=86.34 E-value=0.48 Score=49.66 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=29.7
Q ss_pred EEEEecCCCCCC--CCCCCCCcC---CChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1397 ALLLDYDGTLAP--IAPHPDMAV---LPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1397 ~l~lD~DGTLap--i~~~P~~a~---~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
++++|+||||.. +.-+|+... .+-.-..+|+.|.++ +++++|+||+
T Consensus 11 liv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~-Gi~~~I~Tg~ 61 (168)
T 3ewi_A 11 LLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKKS-GIEVRLISER 61 (168)
T ss_dssp EEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHHC-CCEEEEEeCc
Confidence 799999999987 222222110 111112368888776 6799999999
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=86.25 E-value=2.7 Score=49.32 Aligned_cols=136 Identities=12% Similarity=0.118 Sum_probs=79.7
Q ss_pred cCCeEEEEecCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 339 TKQKIVLGVDRLD-YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 339 ~~~kvIL~VgRLd-~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
....|+++.|++. +.+.+...++|++++ +++ + +++.+.+.... .+. -.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~--v-v~~~g~~~~~~-----------------~~~------~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR--V-VLSSGWAGLGR-----------------IDE------GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC--E-EEECTTTTCCC-----------------SSC------CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE--E-EEEeCCccccc-----------------ccC------CC
Confidence 3456788899998 677777777777653 222 2 22222111100 000 01
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch----hcc---cccEEECCC
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG----EQM---HEALICNPY 490 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa----~~L---~~allVNP~ 490 (1460)
.+. +.+++++.++ +..||++|..+ |.| +..|+++++ -|+|+--+.|-. ..+ +-|+.+++.
T Consensus 269 ~v~-~~~~~~~~~l---l~~~d~~v~~g---G~~-t~~Eal~~G-----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~ 335 (404)
T 3h4t_A 269 DCL-VVGEVNHQVL---FGRVAAVVHHG---GAG-TTTAVTRAG-----APQVVVPQKADQPYYAGRVADLGVGVAHDGP 335 (404)
T ss_dssp TEE-EESSCCHHHH---GGGSSEEEECC---CHH-HHHHHHHHT-----CCEEECCCSTTHHHHHHHHHHHTSEEECSSS
T ss_pred CEE-EecCCCHHHH---HhhCcEEEECC---cHH-HHHHHHHcC-----CCEEEcCCcccHHHHHHHHHHCCCEeccCcC
Confidence 233 4488888665 67999999754 444 567999994 444665544321 112 337777654
Q ss_pred --CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 491 --EIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 491 --D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
+.++++++|.++|+ +. .+.+++.+.+.+
T Consensus 336 ~~~~~~l~~ai~~ll~-~~--~~~~~~~~~~~~ 365 (404)
T 3h4t_A 336 TPTVESLSAALATALT-PG--IRARAAAVAGTI 365 (404)
T ss_dssp SCCHHHHHHHHHHHTS-HH--HHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHhC-HH--HHHHHHHHHHHH
Confidence 68999999999998 32 333444444433
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=86.12 E-value=0.42 Score=50.27 Aligned_cols=33 Identities=6% Similarity=0.166 Sum_probs=23.3
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
+-|++.++|+.|+++ |++++|+|+.+...+...
T Consensus 85 ~~pg~~~~l~~L~~~-g~~~~i~tn~~~~~~~~~ 117 (216)
T 3kbb_A 85 ENPGVREALEFVKSK-RIKLALATSTPQREALER 117 (216)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHH
T ss_pred cCccHHHHHHHHHHc-CCCcccccCCcHHHHHHH
Confidence 345667788888887 888888888775554443
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=85.66 E-value=1.4 Score=51.37 Aligned_cols=43 Identities=9% Similarity=0.030 Sum_probs=30.5
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
+.+.+.++..+ ++..||++|.. .|. .+..|+++| +-|+|+-..
T Consensus 285 v~~~~~~~~~~---ll~~ad~~v~~---~G~-~t~~Eal~~-----G~P~v~~p~ 327 (398)
T 3oti_A 285 VRAVGWTPLHT---LLRTCTAVVHH---GGG-GTVMTAIDA-----GIPQLLAPD 327 (398)
T ss_dssp EEEESSCCHHH---HHTTCSEEEEC---CCH-HHHHHHHHH-----TCCEEECCC
T ss_pred EEEEccCCHHH---HHhhCCEEEEC---CCH-HHHHHHHHh-----CCCEEEcCC
Confidence 56678887655 56679999843 333 477999999 667787544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=85.59 E-value=0.52 Score=50.12 Aligned_cols=38 Identities=8% Similarity=0.117 Sum_probs=29.0
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCChhhHH---HhcCCC
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRNVHNVM---EMVGIE 1455 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~---~~~~~~ 1455 (1460)
.+.|++.+.|+.|.++ +.+++|+||.+...+. +.+|++
T Consensus 92 ~~~~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4578899999999776 5799999999875544 445664
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=85.39 E-value=0.43 Score=50.36 Aligned_cols=12 Identities=42% Similarity=0.623 Sum_probs=11.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 9 ~i~fDlDGTL~d 20 (238)
T 3ed5_A 9 TLLFDVDDTILD 20 (238)
T ss_dssp EEEECCBTTTBC
T ss_pred EEEEcCcCcCcC
Confidence 789999999986
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=85.25 E-value=0.53 Score=50.37 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=25.7
Q ss_pred CChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1418 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1418 ~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+.|++.+.|+.|.+. +.+++|+|+.+...+...
T Consensus 106 ~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~ 138 (240)
T 2no4_A 106 AYPDAAETLEKLKSA-GYIVAILSNGNDEMLQAA 138 (240)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence 347888899999776 579999999987765544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.12 E-value=0.41 Score=52.54 Aligned_cols=13 Identities=31% Similarity=0.314 Sum_probs=11.5
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 3 ~iiFDlDGTL~d~ 15 (263)
T 3k1z_A 3 LLTWDVKDTLLRL 15 (263)
T ss_dssp EEEECCBTTTEEE
T ss_pred EEEEcCCCceeCC
Confidence 6899999999984
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=85.10 E-value=0.57 Score=51.23 Aligned_cols=44 Identities=20% Similarity=0.340 Sum_probs=33.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 1447 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~ 1447 (1460)
+++||+||||..- .... +.+.++|+.+.+. +.+++++|||+...
T Consensus 7 ~v~fDlDGTL~~~-----~~~~-~~~~~~l~~l~~~-g~~~~~~t~~~~~~ 50 (264)
T 1yv9_A 7 GYLIDLDGTIYLG-----KEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKS 50 (264)
T ss_dssp EEEECCBTTTEET-----TEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSC
T ss_pred EEEEeCCCeEEeC-----CEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 7999999999862 1223 6788889888765 57899999997543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=84.76 E-value=0.66 Score=48.47 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=25.1
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.+.|+.|+++ ++++|+|+.+...+...+
T Consensus 69 ~~~~g~~~~l~~l~~~--~~~~i~s~~~~~~~~~~l 102 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLM 102 (206)
T ss_dssp CCCTTHHHHHHHHHTT--SEEEEEEEEEHHHHHHHH
T ss_pred CCCccHHHHHHHHHhc--CcEEEEECChHHHHHHHH
Confidence 4567788888888887 789999997655554444
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=84.45 E-value=0.55 Score=50.92 Aligned_cols=54 Identities=19% Similarity=0.336 Sum_probs=33.6
Q ss_pred EEEEecCCCCCC----CCCCCCCc-CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAP----IAPHPDMA-VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P~~a-~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+++||+||||+. +....... ...-.-..+|+.|.+. +++++|+||++...+.+.
T Consensus 51 ~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~-G~~l~I~T~~~~~~~~~~ 109 (211)
T 3ij5_A 51 LLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITS-DIDVAIITGRRAKLLEDR 109 (211)
T ss_dssp EEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHH
T ss_pred EEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHC-CCEEEEEeCCCHHHHHHH
Confidence 799999999987 22221110 1111111267777765 679999999997665544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=84.43 E-value=0.083 Score=55.28 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=20.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL 72 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L 72 (1460)
+++||+||||++. ...+++...++++++
T Consensus 4 ~i~fDlDGTL~d~-----~~~~~~~~~~~~~~~ 31 (221)
T 2wf7_A 4 AVLFDLDGVITDT-----AEYHFRAWKALAEEI 31 (221)
T ss_dssp EEEECCBTTTBTH-----HHHHHHHHHHHHHHT
T ss_pred EEEECCCCcccCC-----hHHHHHHHHHHHHHc
Confidence 7899999999973 233556667777765
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=84.23 E-value=0.12 Score=54.11 Aligned_cols=29 Identities=24% Similarity=0.265 Sum_probs=21.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLA 73 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~ 73 (1460)
+++||+||||++. ...+++.+.++++++.
T Consensus 8 ~v~fDlDGTL~d~-----~~~~~~~~~~~~~~~g 36 (225)
T 3d6j_A 8 VYLFDFDYTLADS-----SRGIVTCFRSVLERHG 36 (225)
T ss_dssp EEEECCBTTTEEC-----HHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCCCCC-----HHHHHHHHHHHHHHhC
Confidence 7899999999973 2345566777777664
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=84.01 E-value=0.29 Score=58.18 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=28.4
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.+.|+.|+++ |++++|+||.....+...+
T Consensus 256 ~~~pg~~e~l~~Lk~~-G~~~~ivS~~~~~~~~~~~ 290 (415)
T 3p96_A 256 ELMPGARTTLRTLRRL-GYACGVVSGGFRRIIEPLA 290 (415)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH
T ss_pred ccCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHH
Confidence 4677889999999999 9999999997766555444
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=83.88 E-value=3.4 Score=52.86 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=66.7
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHH
Q psy775 352 YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDEL 431 (1460)
Q Consensus 352 ~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL 431 (1460)
..|=-+..++.+.++|++-|+- +|+....+. .....+++..+ + +|-. -.-|+ |.+..+.++.
T Consensus 532 ~~Ki~p~~~~~W~~IL~~vP~S----~L~Ll~~~~----~~~~~l~~~~~----~----~gi~-~~r~~-f~~~~~~~~~ 593 (723)
T 4gyw_A 532 LYKIDPSTLQMWANILKRVPNS----VLWLLRFPA----VGEPNIQQYAQ----N----MGLP-QNRII-FSPVAPKEEH 593 (723)
T ss_dssp GGGCCHHHHHHHHHHHHHCSSE----EEEEEETTG----GGHHHHHHHHH----H----TTCC-GGGEE-EEECCCHHHH
T ss_pred cccCCHHHHHHHHHHHHhCCCC----eEEEEeCcH----HHHHHHHHHHH----h----cCCC-cCeEE-ECCCCCHHHH
Confidence 4456789999999999999985 344444322 11123333322 2 1211 12344 4578899999
Q ss_pred HHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 432 ASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 432 ~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
.+.|+.|||++-|.-+-| +.+..||+.+ |++|++-.
T Consensus 594 l~~~~~~Di~LDt~p~~g-~tT~~eal~~------GvPvvt~~ 629 (723)
T 4gyw_A 594 VRRGQLADVCLDTPLCNG-HTTGMDVLWA------GTPMVTMP 629 (723)
T ss_dssp HHHGGGCSEEECCSSSCC-SHHHHHHHHT------TCCEEBCC
T ss_pred HHHhCCCeEEeCCCCcCC-HHHHHHHHHc------CCCEEEcc
Confidence 999999999999999977 7889999998 55566643
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=83.77 E-value=1.3 Score=52.16 Aligned_cols=73 Identities=8% Similarity=0.107 Sum_probs=50.9
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECC--CC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNP--YE 491 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP--~D 491 (1460)
.+.+.+++.++ |..||++|. .-|.| +..|+++| |.|+|+--..+ .+..+ +.|+.+++ .+
T Consensus 289 ~~~~~~~~~~l---l~~~d~~v~---~~G~~-t~~Ea~~~-----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~ 356 (416)
T 1rrv_A 289 FAIDEVNFQAL---FRRVAAVIH---HGSAG-TEHVATRA-----GVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT 356 (416)
T ss_dssp EEESSCCHHHH---GGGSSEEEE---CCCHH-HHHHHHHH-----TCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCC
T ss_pred EEeccCChHHH---hccCCEEEe---cCChh-HHHHHHHc-----CCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCC
Confidence 34588887664 799999997 45655 89999999 44556654432 22223 33777765 47
Q ss_pred HHHHHHHHHHHcCCC
Q psy775 492 IDAAAEVIHRALTMP 506 (1460)
Q Consensus 492 ~~elA~AI~~aL~m~ 506 (1460)
.++++++|.++ +++
T Consensus 357 ~~~l~~~i~~l-~~~ 370 (416)
T 1rrv_A 357 FESLSAALTTV-LAP 370 (416)
T ss_dssp HHHHHHHHHHH-TSH
T ss_pred HHHHHHHHHHh-hCH
Confidence 89999999998 643
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=83.47 E-value=0.27 Score=51.45 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=25.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPD 77 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g 77 (1460)
+++||+||||++. ...+++.+.++++.+++. |
T Consensus 10 ~i~fDlDGTL~~~-----~~~~~~~~~~~~~~l~~~-g 41 (234)
T 3ddh_A 10 VIAFDADDTLWSN-----EPFFQEVEKQYTDLLKPY-G 41 (234)
T ss_dssp EEEECCBTTTBCC-----HHHHHHHHHHHHHHTGGG-S
T ss_pred EEEEeCCCCCccC-----cchHHHHHHHHHHHHHhc-C
Confidence 7899999999973 335677788888999887 5
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=83.46 E-value=1.4 Score=51.05 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=27.9
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.+.+++.++.|+++ |+.|+||||=+...+..+.
T Consensus 143 ~~~~~~~~l~~~l~~~-G~~v~ivSas~~~~v~~~a 177 (327)
T 4as2_A 143 RVFSGQRELYNKLMEN-GIEVYVISAAHEELVRMVA 177 (327)
T ss_dssp EECHHHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHH
Confidence 3677899999999999 9999999996555554444
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=83.42 E-value=0.83 Score=49.41 Aligned_cols=12 Identities=50% Similarity=0.827 Sum_probs=11.2
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 30 ~i~fDlDGTL~d 41 (259)
T 4eek_A 30 AVLFDLDGVLVE 41 (259)
T ss_dssp EEEEESBTTTEE
T ss_pred EEEECCCCCccc
Confidence 899999999986
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=82.65 E-value=0.31 Score=58.06 Aligned_cols=26 Identities=8% Similarity=0.083 Sum_probs=21.1
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
.+.+++.++|+.|+++ |++++|+|+.
T Consensus 100 ~~~~~~~~~L~~L~~~-g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKK-GFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred CcChhHHHHHHHHHHC-CCEEEEEeCC
Confidence 3556778888889988 8999999985
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=82.43 E-value=0.13 Score=54.47 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=23.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV 78 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~ 78 (1460)
+++||+||||++. ...++.....+++.+++. |.
T Consensus 4 ~i~fDlDGTL~d~-----~~~~~~~~~~~~~~~~~~-g~ 36 (234)
T 3u26_A 4 AVFFDSLGTLNSV-----EGAAKSHLKIMEEVLGDY-PL 36 (234)
T ss_dssp EEEECSTTTTBCH-----HHHHHHHHHHHHHHCSSS-SS
T ss_pred EEEEcCCCccccc-----cchhHHHHHHHHHHHhhc-CC
Confidence 6899999999973 223455666677777665 54
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=82.34 E-value=1.2 Score=47.00 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=28.7
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH---hcCCC
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRNVHNVME---MVGIE 1455 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~---~~~~~ 1455 (1460)
.+.|++.++|+.|.++ +++++|+||.+...+.. .+|+.
T Consensus 86 ~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 86 HLTPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCccHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHcCCC
Confidence 4567889999999876 67999999998765544 44554
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=82.27 E-value=1 Score=47.85 Aligned_cols=29 Identities=21% Similarity=0.177 Sum_probs=18.9
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
++|++.++|+.|+++ ++++|+|+.+...+
T Consensus 113 ~~~~~~~~l~~l~~~--~~~~i~Sn~~~~~~ 141 (229)
T 4dcc_A 113 IPTYKLDLLLKLREK--YVVYLLSNTNDIHW 141 (229)
T ss_dssp CCHHHHHHHHHHTTT--SEEEEEECCCHHHH
T ss_pred ccHHHHHHHHHHHhc--CcEEEEECCChHHH
Confidence 446667777777765 67777777664443
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=82.07 E-value=0.89 Score=51.29 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=28.2
Q ss_pred ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 59 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 59 a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..+.|++.++++.|+++ |+.|+|+||=....+....
T Consensus 140 i~l~~g~~e~i~~l~~~-gi~v~ivSgg~~~~i~~i~ 175 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQH-GIPVFIFSAGIGDVLEEVI 175 (297)
T ss_dssp CCBCBTHHHHHHHHHHT-TCCEEEEEEEEHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHH
Confidence 35778999999999999 9999999995444444433
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=81.69 E-value=3.4 Score=48.47 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=56.0
Q ss_pred CEEEEEEcCc-cccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 741 QKIVLGVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 741 kkiIl~VdRL-d~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
..|+++.|++ +..+.+...++|++++ + . + ++++++... . . . .. ..+-
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~--~-~v~~~g~~~--~-~--------~--------~~-----~~~~ 286 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH----G-R--R-VILSRGWAD--L-V--------L--------PD-----DGAD 286 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT----T-C--C-EEECTTCTT--C-C--------C--------SS-----CGGG
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC----C-C--e-EEEEeCCCc--c-c--------c--------cC-----CCCC
Confidence 5688899999 5777777777777653 2 2 1 223222111 0 0 0 00 0112
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
+.+.+.+++.++ +..||++|.. .|. .+..|++++ +-|+|+-.+.
T Consensus 287 v~~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~-----G~P~i~~p~~ 330 (415)
T 1iir_A 287 CFAIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARA-----GAPQILLPQM 330 (415)
T ss_dssp EEECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHH-----TCCEEECCCS
T ss_pred EEEeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHc-----CCCEEECCCC
Confidence 556789998664 6999999974 455 578999999 6788888764
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=81.27 E-value=0.29 Score=51.02 Aligned_cols=28 Identities=21% Similarity=0.293 Sum_probs=19.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL 72 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L 72 (1460)
+++||+||||++. ...+.+...++++++
T Consensus 11 ~i~fDlDGTL~~~-----~~~~~~~~~~~~~~~ 38 (226)
T 1te2_A 11 AAIFDMDGLLIDS-----EPLWDRAELDVMASL 38 (226)
T ss_dssp EEEECCBTTTBCC-----HHHHHHHHHHHHHHT
T ss_pred EEEECCCCCcCcC-----HHHHHHHHHHHHHHc
Confidence 7899999999973 223445556666654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=80.39 E-value=0.88 Score=48.13 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
.+.|++.+.|+.|.+. +.+++|+|+.+...+...
T Consensus 103 ~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~ 136 (231)
T 3kzx_A 103 MLNDGAIELLDTLKEN-NITMAIVSNKNGERLRSE 136 (231)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHH
T ss_pred eECcCHHHHHHHHHHC-CCeEEEEECCCHHHHHHH
Confidence 4566777778888765 467888888776555443
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=80.27 E-value=1.6 Score=47.58 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=27.7
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
.+.|++.++|+.|.+. +++++|+||++...+...
T Consensus 144 ~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~ 177 (280)
T 3skx_A 144 RIRPESREAISKLKAI-GIKCMMLTGDNRFVAKWV 177 (280)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHH
T ss_pred CCCHhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHH
Confidence 4568899999999876 579999999998776654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1460 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-94 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 3e-69 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-23 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 2e-11 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 2e-08 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 310 bits (795), Expect = 2e-94
Identities = 144/401 (35%), Positives = 203/401 (50%), Gaps = 22/401 (5%)
Query: 127 EDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQ 186
ED+ +K S ++ + D YYN N WP FH D F W Y +
Sbjct: 48 EDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLR 107
Query: 187 VNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFL 246
VN ADK + LQ ++WIHDYHL+ A+ +R ++ + ++GFFL
Sbjct: 108 VNALLADKLLPLLQ----------DDDIIWIHDYHLLPFAHELR----KRGVNNRIGFFL 153
Query: 247 HIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE 306
HIPFP +IF P D +L+ + D++GF E+ L F+DC R
Sbjct: 154 HIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTT-RSAKSHT 212
Query: 307 HGGRTVRIRPLPIAIPYERF-------VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 359
G+ R PI I + + A + + + V+RLDY+KGL R
Sbjct: 213 AWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPER 272
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
A+E LLEK+P+H K+ QIA SR DV+ YQD++ +++ GRING++ W+P+
Sbjct: 273 FLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPL 332
Query: 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 479
Y+ + L +R + V LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA
Sbjct: 333 YYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 392
Query: 480 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
++ ALI NPY+ D A + RALTM ER R +
Sbjct: 393 ELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDV 433
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 238 bits (608), Expect = 3e-69
Identities = 132/455 (29%), Positives = 192/455 (42%), Gaps = 109/455 (23%)
Query: 539 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 598
Y +VN ADK + LQ ++WIHDYHL+ A+ +R ++ + ++G
Sbjct: 105 YLRVNALLADKLLPLLQ----------DDDIIWIHDYHLLPFAHELR----KRGVNNRIG 150
Query: 599 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNL 658
FFLHIPFP +IF P D +L+ + D++GF E+ L F+DC R
Sbjct: 151 FFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTT-RSAK 209
Query: 659 LVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNS 718
G+ R PI I + + A
Sbjct: 210 SHTAWGKAFRTEVYPIGIEPKEIAKQAAGP------------------------------ 239
Query: 719 IAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVT 778
+ A + + + V+RLDY+KGL R A+E LLEK+P+H K+
Sbjct: 240 --------LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIR 291
Query: 779 LLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 838
QIA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L +R +
Sbjct: 292 YTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 351
Query: 839 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898
V LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A
Sbjct: 352 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAA 411
Query: 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRA 958
+ AL
Sbjct: 412 L--------------------------------------DRAL----------------- 416
Query: 959 LTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGM 993
TM ER R + +D+N+W F+ +
Sbjct: 417 -TMSLAERISRHAEMLDVIVKNDINHWQECFISDL 450
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 103 bits (256), Expect = 2e-23
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
++ + ++GFFLHIPFP +IF P D +L+ + D++GF E+ L F+DC
Sbjct: 142 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLT 201
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERF-------VQLAQAAPRVIDTKQKIVLGV 1181
R G+ R PI I + + A + + + V
Sbjct: 202 RVTT-RSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSV 260
Query: 1182 DRLDYTKGLVHRNELF 1197
+RLDY+KGL R +
Sbjct: 261 ERLDYSKGLPERFLAY 276
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 63.0 bits (152), Expect = 2e-11
Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 4/128 (3%)
Query: 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGL 100
+ LDYDGTL PI +P+ + + L I++GR+ + + ++
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDIN 60
Query: 101 TYAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCN 160
+ +G + F + + + V +
Sbjct: 61 MICYHGA--CSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHL 118
Query: 161 GTFWPLFH 168
G
Sbjct: 119 GLMGADMK 126
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 54.6 bits (130), Expect = 2e-08
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 1398 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454
+ LDYDGTL PI +P+ + + L I++GR+ + + +
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPL 57
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1460 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.86 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.85 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.79 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.75 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.74 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.7 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.69 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.68 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.52 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.41 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.85 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.81 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.73 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.7 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.67 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.66 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.47 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.42 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.42 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.32 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.26 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.16 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.15 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.93 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.71 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.27 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 97.08 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 96.99 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 96.97 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.91 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 96.81 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 96.76 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.66 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.66 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.62 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.6 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.51 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.49 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 96.4 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.36 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.16 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.96 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.94 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.94 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 95.63 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.48 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 95.02 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 94.74 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 94.67 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.5 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 94.48 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 93.89 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.03 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 92.98 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.07 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 91.89 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 91.86 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 90.8 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 89.93 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.75 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 88.93 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 88.87 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 88.61 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 86.68 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 85.27 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 84.32 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 83.97 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 83.17 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 82.91 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 82.27 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 82.2 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 81.39 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-80 Score=750.48 Aligned_cols=389 Identities=37% Similarity=0.627 Sum_probs=366.0
Q ss_pred hccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEE
Q psy775 137 LQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVW 216 (1460)
Q Consensus 137 ~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVw 216 (1460)
..+++.||++++++++.||+||||++|||+|||+++...|++++|++|++||+.||++|++.++ ++|+||
T Consensus 58 ~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~~~~~~~Y~~vN~~fA~~l~~~~~----------~~d~iw 127 (456)
T d1uqta_ 58 GNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQ----------DDDIIW 127 (456)
T ss_dssp TTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGCC----------TTCEEE
T ss_pred cCceeEEecCCHHHHHHHHHHhhhccccccccCccccccccHHHHHHHHHHHHHHHHHHHHhcc----------CCCeEE
Confidence 4678999999999999999999999999999999999999999999999999999999998764 699999
Q ss_pred EeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc
Q psy775 217 IHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC 296 (1460)
Q Consensus 217 IHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~ 296 (1460)
||||||+++|.+||++.| +++||||||+|||++++|+++|++++|++|||+||+||||+++|++||+++|+++++.
T Consensus 128 vhDyhl~llp~~lR~~~~----~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~ 203 (456)
T d1uqta_ 128 IHDYHLLPFAHELRKRGV----NNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRV 203 (456)
T ss_dssp EESGGGTTHHHHHHHTTC----CSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCE
T ss_pred EeccchhhhHHHHHHhCC----CCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCc
Confidence 999999999999998755 8999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch-----hhhc--cCCeEEEEecCccccCCHHHHHHHHHHHHHh
Q psy775 297 RVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP-----RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK 369 (1460)
Q Consensus 297 ~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~-----~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~ 369 (1460)
+..... .+.+.|+.+++.++|+|||++.|........ .+.+ .++++|++|||+++.||+..+|+||++|+++
T Consensus 204 ~~~~~~-~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~ 282 (456)
T d1uqta_ 204 TTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEK 282 (456)
T ss_dssp EEETTT-EEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHH
T ss_pred ccccCC-eEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHh
Confidence 765544 5788999999999999999999976543221 1112 7899999999999999999999999999999
Q ss_pred CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCC
Q psy775 370 HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDG 449 (1460)
Q Consensus 370 ~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEG 449 (1460)
||+++++++|+|++.|++++.++|.+++.++.+++++||++|++.+|.|++++++.++++++.++|+.||++++||++||
T Consensus 283 ~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG 362 (456)
T d1uqta_ 283 YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 362 (456)
T ss_dssp CGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBS
T ss_pred CccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCC
Q psy775 450 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQ 529 (1460)
Q Consensus 450 fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~ 529 (1460)
||||++|||||+.|.++|+||+|+++|+++++.+|++|||+|++++|+||.+||+||++||+.|+++++++|.+++
T Consensus 363 ~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~---- 438 (456)
T d1uqta_ 363 MNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKND---- 438 (456)
T ss_dssp CCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTC----
T ss_pred CCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCC----
Confidence 9999999999999977899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHh
Q psy775 530 SSLGGNTSAYAQVNQEFADKTIKALQIL 557 (1460)
Q Consensus 530 ~sl~~~~~~Y~~VNq~fAd~~le~l~~~ 557 (1460)
+.+ |++.+++.+++.
T Consensus 439 ------------~~~-W~~~fl~~l~~~ 453 (456)
T d1uqta_ 439 ------------INH-WQECFISDLKQI 453 (456)
T ss_dssp ------------HHH-HHHHHHHHHHHS
T ss_pred ------------HHH-HHHHHHHHHHhh
Confidence 666 999999998764
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.8e-66 Score=623.40 Aligned_cols=356 Identities=37% Similarity=0.648 Sum_probs=325.8
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|+++|+.||+++.+.++ +.|+||||||||+++|.++| +.+++.+|+||+|+|||+++.|+
T Consensus 99 ~~~~~~Y~~vN~~fA~~l~~~~~----------~~d~iwvhDyhl~llp~~lR----~~~~~~~i~~flH~pfP~~~~fr 164 (456)
T d1uqta_ 99 RPAWDGYLRVNALLADKLLPLLQ----------DDDIIWIHDYHLLPFAHELR----KRGVNNRIGFFLHIPFPTPEIFN 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCC----------TTCEEEEESGGGTTHHHHHH----HTTCCSCEEEECCSCCCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc----------CCCeEEEeccchhhhHHHHH----HhCCCCcEEEEeCCCCCChHHhc
Confidence 56799999999999999887532 23799999999999999999 67889999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++|+++|++||+||||+++|++||+++|.++++....... .+.+.|+.+++.++|+|||++.|...... + ..
T Consensus 165 ~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~-~i~~~gr~v~v~~~p~GID~~~~~~~~~~-~-~~ 241 (456)
T d1uqta_ 165 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAG-P-LP 241 (456)
T ss_dssp TSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT-EEEETTEEEEEEECCCCCCHHHHHHHHHS-C-CC
T ss_pred cCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC-eEEecCceeeeeeecCcccchhhhhhccc-H-HH
Confidence 999999999999999999999999999999999999998776543 58899999999999999999999876543 2 11
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
+.+.+++.. ..++++|++|||+|+.||+..+|+||++||++||+
T Consensus 242 -----------------~~~~~l~~~-------------------~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~ 285 (456)
T d1uqta_ 242 -----------------PKLAQLKAE-------------------LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQ 285 (456)
T ss_dssp -----------------HHHHHHHHH-------------------TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGG
T ss_pred -----------------HHHHHHHHh-------------------cCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCcc
Confidence 112333332 36899999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
++++++|+|++.|++++.++|++++.++.++|++||++|++.+|.|++++++.++++++.++|+.|||+++||++|||||
T Consensus 286 ~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~l 365 (456)
T d1uqta_ 286 HHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNL 365 (456)
T ss_dssp GTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCH
T ss_pred ccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
|++|||||+.+.++|+||+|+++|+++
T Consensus 366 v~~Ea~a~~~p~~~g~lIlS~~~G~~~----------------------------------------------------- 392 (456)
T d1uqta_ 366 VAKEYVAAQDPANPGVLVLSQFAGAAN----------------------------------------------------- 392 (456)
T ss_dssp HHHHHHHHSCTTSCCEEEEETTBGGGG-----------------------------------------------------
T ss_pred HHHHHHHhCCCCCCCcEEEeCCCCCHH-----------------------------------------------------
Confidence 999999999887689999999999887
Q ss_pred CcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhh
Q psy775 933 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLI 997 (1460)
Q Consensus 933 ~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 997 (1460)
++.+|++|||||++++|+||.+||+||++||+.|+++++++|.+||+++|+++||++|++..
T Consensus 393 ---~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 393 ---ELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp ---TCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred ---HhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhhc
Confidence 33467999999999999999999999999999999999999999999999999999998754
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.86 E-value=1.1e-20 Score=219.25 Aligned_cols=313 Identities=18% Similarity=0.216 Sum_probs=208.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc---
Q psy775 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD--- 254 (1460)
Q Consensus 178 ~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e--- 254 (1460)
...|..+.+....|+......++...+. ....|+|++|+++..+++.++++.. +.++.+.+|-.++..-
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~pDiIh~~~~~~~~~~~~~~~~~-----~~~~v~~~h~~~~~~~~~~ 161 (437)
T d2bisa1 90 GPGWDGLIRKAVTFGRASVLLLNDLLRE---EPLPDVVHFHDWHTVFAGALIKKYF-----KIPAVFTIHRLNKSKLPAF 161 (437)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTS---SCCCSEEEEETGGGHHHHHHHHHHH-----CCCEEEEESSCCCCCEEHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhc---CCCCCEEEECChhhhhHhhhhhccc-----cCceeEEEeeccccccchh
Confidence 3445555554445555444444433221 1246999999999988888887643 5789999998765321
Q ss_pred cc------ccC--CCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhh
Q psy775 255 IF------RLF--PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERF 326 (1460)
Q Consensus 255 if------r~L--P~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f 326 (1460)
.+ ... +.......+...+|.+...+..++...... + .....++.++|+|+|++.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~----~-------------~~~~~ki~vi~~g~d~~~~ 224 (437)
T d2bisa1 162 YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGF----F-------------RNFEGKITYVFNGIDCSFW 224 (437)
T ss_dssp HHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHH----H-------------GGGTTTEEECCCCCCTTTS
T ss_pred hhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhh----h-------------ccccCceEEEecccccccc
Confidence 00 001 111223344556788877776555433221 1 1112346789999999888
Q ss_pred hhhhccch------hhhc----cCCeEEEEecCcc-ccCCHHHHHHHHHHHHHh--CCCCCCcEEEEEEEcCCCCChHHH
Q psy775 327 VQLAQAAP------RVID----TKQKIVLGVDRLD-YTKGLVHRLKAFETLLEK--HPEHLEKVTLLQIAVPSRTDVKEY 393 (1460)
Q Consensus 327 ~~~~~~~~------~~~~----~~~kvIL~VgRLd-~~KGI~~lL~Af~~lL~~--~P~~~~kvvLvqig~psr~~~~ey 393 (1460)
.+...... ...+ .++++++++||++ +.||+..+++|++.+..+ .|+ +.|+.+|.. .+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~----~~~~ 296 (437)
T d2bisa1 225 NESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG----DPEL 296 (437)
T ss_dssp CGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB----CHHH
T ss_pred cccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhccccccccccc----ceeeeeccc----cccc
Confidence 65422111 1111 4678999999997 479999999999998654 344 556666632 1223
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC
Q psy775 394 QDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473 (1460)
Q Consensus 394 ~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe 473 (1460)
....+.+.. .. ..++++.+.++.+++..+|++||++++||..||+|++++||||| |.|+|+|.
T Consensus 297 ~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~-----G~Pvi~~~ 359 (437)
T d2bisa1 297 EGWARSLEE-------KH-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAIPIASA 359 (437)
T ss_dssp HHHHHHHHH-------TC-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTT-----TCEEEEES
T ss_pred ccchhhhcc-------cc-----ccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHC-----CCCEEEeC
Confidence 222222221 11 23567789999999999999999999999999999999999999 67789999
Q ss_pred CCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHH
Q psy775 474 FAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTI 551 (1460)
Q Consensus 474 ~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~l 551 (1460)
.+|..+.+.+ |++|+|.|++++|++|.++|+++++.++...++.++..++++ +.+ .|++++
T Consensus 360 ~g~~~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s----------------~~~-~a~~~~ 422 (437)
T d2bisa1 360 VGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS----------------WEK-SAERYV 422 (437)
T ss_dssp CTTHHHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSC----------------HHH-HHHHHH
T ss_pred CCCcHHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC----------------HHH-HHHHHH
Confidence 8887776643 899999999999999999998666555555555566666666 344 777888
Q ss_pred HHHHHh
Q psy775 552 KALQIL 557 (1460)
Q Consensus 552 e~l~~~ 557 (1460)
+.|+.+
T Consensus 423 ~iY~~~ 428 (437)
T d2bisa1 423 KAYTGS 428 (437)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 877653
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.85 E-value=5.6e-21 Score=228.25 Aligned_cols=279 Identities=13% Similarity=0.156 Sum_probs=191.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCC-----CCc
Q psy775 179 EHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPF-----PPW 253 (1460)
Q Consensus 179 ~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPF-----Ps~ 253 (1460)
..|..|...++.+++.+.+... ....|+|.+||+|-.+.+.+++.. ...++++.+.+|... |.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~--------~~~pDIvH~h~~~~~l~~~~~~~~---~~~~ip~V~t~H~~~~~~~~~~- 173 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLP--------GWRPDMVHAHDWQAAMTPVYMRYA---ETPEIPSLLTIHNIAFQGQFGA- 173 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSS--------SCCCSEEEEEHHHHTTHHHHHHHS---SSCCCCEEEEESCTTCCCEECG-
T ss_pred ccHHHHHHHHHHHHhhhhhccc--------CCCCCEEEecchhHHHHHHHHHHh---hCCCCCEEEEEecccccccCCH-
Confidence 3578888888888765543321 124699999999999999888753 235789999999631 21
Q ss_pred cccccCC---------------CcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEee
Q psy775 254 DIFRLFP---------------WSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLP 318 (1460)
Q Consensus 254 eifr~LP---------------~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viP 318 (1460)
..+..+. ....+-.++..+|.+-.-+..|++..+..-.. .+.+.. ...+..++.++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~vi~ 245 (477)
T d1rzua_ 174 NIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFG-MGLEGV-------IGSRAHVLHGIV 245 (477)
T ss_dssp GGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHH-TTCHHH-------HHTTGGGEEECC
T ss_pred HHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcC-cchhhh-------hhhccccEEEEE
Confidence 1111111 01233446677898888888887765442110 111100 112334677899
Q ss_pred cccCchhhhhhhccc-----------------hhhhc------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCC
Q psy775 319 IAIPYERFVQLAQAA-----------------PRVID------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLE 375 (1460)
Q Consensus 319 iGID~~~f~~~~~~~-----------------~~~~~------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~ 375 (1460)
+|+|.+.|.+..... ..... .+.++|+++||+++.||++.+++|+++++++++.
T Consensus 246 ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~--- 322 (477)
T d1rzua_ 246 NGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR--- 322 (477)
T ss_dssp CCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE---
T ss_pred CCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe---
Confidence 999988775421100 00111 4567999999999999999999999999887543
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCccee
Q psy775 376 KVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAK 455 (1460)
Q Consensus 376 kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLVal 455 (1460)
++.+|.+ +... ..++.++..+.+.+ +.+.+..+.+++..+|++||++|+||.+||||+|++
T Consensus 323 ---l~~~G~G---~~~~----~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~l 383 (477)
T d1rzua_ 323 ---LVVLGAG---DVAL----EGALLAAASRHHGR---------VGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQL 383 (477)
T ss_dssp ---EEEEECB---CHHH----HHHHHHHHHHTTTT---------EEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHH
T ss_pred ---EEEEecC---CchH----HHHHHHHHhhcCCe---------EEEEcccChhHHHHHHHhCccccCCccccCCCHHHH
Confidence 3444422 2221 22333333444433 334577889999999999999999999999999999
Q ss_pred eeeeeccCCCCCeEEEcCCCCchhccc------------ccEEECCCCHHHHHHHHHHHcC
Q psy775 456 EFVACQINEPPGVLIVSPFAGAGEQMH------------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 456 EamAcq~~~~~GvlVlSe~aGaa~~L~------------~allVNP~D~~elA~AI~~aL~ 504 (1460)
||||| |.|+|+|..+|..+.+. .|++|+|.|++++|+||.++|+
T Consensus 384 EAma~-----G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 439 (477)
T d1rzua_ 384 YALRY-----GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVR 439 (477)
T ss_dssp HHHHH-----TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHH
T ss_pred HHHHc-----CCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 99999 78889999999888773 3799999999999999999886
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.79 E-value=6.1e-19 Score=210.43 Aligned_cols=323 Identities=12% Similarity=0.111 Sum_probs=197.8
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCC---ccccccC--cc-------------HHHHHhhcccC
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPP---WDIFRLF--PW-------------SDEILQGMLGC 627 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~---~e~fr~l--P~-------------r~eIL~~LL~a 627 (1460)
.|+|.+||+|-.+.+.+++. ......+..+.+|.. +.. ...+..+ ++ ..-.-.++..+
T Consensus 131 pDIvH~h~~~~~l~~~~~~~---~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 207 (477)
T d1rzua_ 131 PDMVHAHDWQAAMTPVYMRY---AETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTA 207 (477)
T ss_dssp CSEEEEEHHHHTTHHHHHHH---SSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHC
T ss_pred CCEEEecchhHHHHHHHHHH---hhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhh
Confidence 48999999999888887762 345667899999963 211 1111100 00 01122345677
Q ss_pred ceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccccccc
Q psy775 628 DMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDY 707 (1460)
Q Consensus 628 DlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~ 707 (1460)
|.+-.-+..|++..+..-.- .+.+.. ...+.-++.++|+|+|.+.|.+.....-... ...+....
T Consensus 208 d~~~~vs~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~-------~~~~~~~~ 272 (477)
T d1rzua_ 208 TALSTVSPSYAEEILTAEFG-MGLEGV-------IGSRAHVLHGIVNGIDADVWNPATDHLIHDN-------YSAANLKN 272 (477)
T ss_dssp SEEEESCHHHHHHTTSHHHH-TTCHHH-------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSC-------CBTTBCTT
T ss_pred hhhhhccHHHHHHHHHHhcC-cchhhh-------hhhccccEEEEECCcchhhcccccccccccc-------chhhhHHH
Confidence 88877777777665432110 111100 1122345778999999988865321100000 00111111
Q ss_pred chhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCC
Q psy775 708 TKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSR 787 (1460)
Q Consensus 708 ~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr 787 (1460)
.+...+.++...+++ .+++++|+++||+++.||++.+++|+++++++++. ++.+|.+.
T Consensus 273 ~~~~~~~~~~~~~~~---------------~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G~G~- 330 (477)
T d1rzua_ 273 RALNKKAVAEHFRID---------------DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLGAGD- 330 (477)
T ss_dssp HHHHHHHHHHHHTCC---------------CSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEECBC-
T ss_pred hhhhHHHHHHhcccc---------------cCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEecCC-
Confidence 111112233322211 24567999999999999999999999999887653 44455432
Q ss_pred CChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCc
Q psy775 788 TDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 867 (1460)
Q Consensus 788 ~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g 867 (1460)
. ....++.++..+.+.+ +.+.+..+.+++..+|+.||++|+||.+||||+|++||||| |.
T Consensus 331 --~----~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~-----G~ 390 (477)
T d1rzua_ 331 --V----ALEGALLAAASRHHGR---------VGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY-----GC 390 (477)
T ss_dssp --H----HHHHHHHHHHHHTTTT---------EEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-----TC
T ss_pred --c----hHHHHHHHHHhhcCCe---------EEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc-----CC
Confidence 1 2234444555555544 55667888999999999999999999999999999999999 78
Q ss_pred eEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCC
Q psy775 868 VLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE 947 (1460)
Q Consensus 868 ~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d 947 (1460)
|+|+|..+|..+.. ... ..|.++..+ ..+++|+|.|
T Consensus 391 PvVas~~GG~~E~v------~d~------------------------------~~~~~~~~~--------~~G~l~~~~d 426 (477)
T d1rzua_ 391 IPVVARTGGLADTV------IDA------------------------------NHAALASKA--------ATGVQFSPVT 426 (477)
T ss_dssp EEEEESSHHHHHHC------CBC------------------------------CHHHHHTTC--------CCBEEESSCS
T ss_pred CEEEcCCCCCccee------ecC------------------------------CccccccCC--------CceEEeCCCC
Confidence 99999999988822 110 111111112 2458999999
Q ss_pred HHHHHHHHHHHhCC---CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 948 IDAAAEVIHRALTM---PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 948 ~~~iA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++++|++|.++|+. ++..++++.+++. ..++++.-+++.++-.+++
T Consensus 427 ~~~la~ai~~~l~~~~~~~~~~~~~~~a~~---~~fsw~~~a~~~~~lY~~l 475 (477)
T d1rzua_ 427 LDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQL 475 (477)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCCHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHH
Confidence 99999999998863 3333333333322 3467777777766554443
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.75 E-value=2.1e-17 Score=191.50 Aligned_cols=301 Identities=17% Similarity=0.171 Sum_probs=201.1
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcc---c--------cccCccHHHHHhhcccCceeecccH
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD---I--------FRLFPWSDEILQGMLGCDMVGFHIE 635 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e---~--------fr~lP~r~eIL~~LL~aDlIGFqt~ 635 (1460)
.|+|.+|+++..+++.++.+ ..+.+..+.+|-.++..- . +...+...........+|.|...+.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~-----~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~ 195 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKK-----YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSR 195 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHH-----HHCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCH
T ss_pred CCEEEECChhhhhHhhhhhc-----cccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccch
Confidence 37999999998777766652 235678888887543210 0 0011111122334455777777666
Q ss_pred hHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHH
Q psy775 636 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESI 715 (1460)
Q Consensus 636 ~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 715 (1460)
.++..... ..+ ....++.++|+|+|++.|.+...... . ......+
T Consensus 196 ~~~~~~~~----~~~-------------~~~~ki~vi~~g~d~~~~~~~~~~~~--~----------------~~~~~~~ 240 (437)
T d2bisa1 196 GYLIDEWG----FFR-------------NFEGKITYVFNGIDCSFWNESYLTGS--R----------------DERKKSL 240 (437)
T ss_dssp HHHHHTHH----HHG-------------GGTTTEEECCCCCCTTTSCGGGCCSC--H----------------HHHHHHH
T ss_pred hhhhhhhh----hhc-------------cccCceEEEecccccccccccccchh--h----------------HHHHHhh
Confidence 55433221 111 11123678899999988865422111 0 0111233
Q ss_pred HhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccc-cCCHHHHHHHHHHHHHh--CCCCCCCEEEEEEEcCCCCChhH
Q psy775 716 RNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDY-TKGLVHRLKAFETLLEK--HPEHLEKVTLLQIAVPSRTDVKE 792 (1460)
Q Consensus 716 r~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~-~KGi~~kL~Afe~fL~~--~P~~~~kVvLvqi~~psr~~~~~ 792 (1460)
+++++ ..++++|+++||++. .||+...++|++.+.++ +|+ +.|+.+|.+. +.
T Consensus 241 ~~~~~-----------------~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~~----~~ 295 (437)
T d2bisa1 241 LSKFG-----------------MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----PE 295 (437)
T ss_dssp HHHTT-----------------CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCBC----HH
T ss_pred hhhhh-----------------ccCCceEEEeecccccchhHHHHHhhhccccccccccc----ceeeeecccc----cc
Confidence 43332 246789999999975 79999999999998654 354 5677666432 22
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEc
Q psy775 793 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS 872 (1460)
Q Consensus 793 y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlS 872 (1460)
++.. ++.+.. .. ..++++.+.++.+++..+|+.||+++.||..||++++++||||| +.|+|+|
T Consensus 296 ~~~~---~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~-----G~Pvi~~ 358 (437)
T d2bisa1 296 LEGW---ARSLEE----KH-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAIPIAS 358 (437)
T ss_dssp HHHH---HHHHHH----TC-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTT-----TCEEEEE
T ss_pred cccc---hhhhcc----cc-----ccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHC-----CCCEEEe
Confidence 2222 222221 11 13477889999999999999999999999999999999999999 7899999
Q ss_pred CCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHH
Q psy775 873 PFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 952 (1460)
Q Consensus 873 e~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA 952 (1460)
..+|..+.+ .+ ..+++|+|.|++++|
T Consensus 359 ~~g~~~e~i---------------------------------------------~~---------~~G~~~~~~d~~~la 384 (437)
T d2bisa1 359 AVGGLRDII---------------------------------------------TN---------ETGILVKAGDPGELA 384 (437)
T ss_dssp SCTTHHHHC---------------------------------------------CT---------TTCEEECTTCHHHHH
T ss_pred CCCCcHHhE---------------------------------------------EC---------CcEEEECCCCHHHHH
Confidence 988866511 00 245899999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccCCC
Q psy775 953 EVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGDD 1003 (1460)
Q Consensus 953 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~ 1003 (1460)
++|.++|+++++.++...+..++++++++++++++++++-.++++++..+.
T Consensus 385 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~~~~ 435 (437)
T d2bisa1 385 NAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDF 435 (437)
T ss_dssp HHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCBCTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHhhh
Confidence 999999987666555545555777888999999999999888887765543
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.74 E-value=9.6e-18 Score=177.33 Aligned_cols=181 Identities=16% Similarity=0.227 Sum_probs=133.4
Q ss_pred ccCchhhhhhhccc------hhhhc----cCCeEEEEecCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCC
Q psy775 320 AIPYERFVQLAQAA------PRVID----TKQKIVLGVDRLD-YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT 388 (1460)
Q Consensus 320 GID~~~f~~~~~~~------~~~~~----~~~kvIL~VgRLd-~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~ 388 (1460)
|||.+.|.+..... ..+++ +++++++++||++ +.||++.+++|++.+.++.+.. ++.|+.+|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC--CeEEEEEeec---
Confidence 89999986542111 11222 6788999999997 5899999999999997653321 3567766632
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCe
Q psy775 389 DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 468 (1460)
Q Consensus 389 ~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gv 468 (1460)
.+.++.+.+.+.. . + ..++++.+.++.+++..+|+.||++++||..||+|++.+|||+| |.|
T Consensus 76 -~~~~~~~~~~~~~---~----~-----~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~-----G~p 137 (196)
T d2bfwa1 76 -DPELEGWARSLEE---K----H-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAI 137 (196)
T ss_dssp -CHHHHHHHHHHHH---H----C-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-----TCE
T ss_pred -ccchhhhhhhhhh---c----c-----ceeEEeeeccccccchhccccccccccccccccccccchhhhhc-----Cce
Confidence 2334433333322 2 1 23567789999999999999999999999999999999999999 678
Q ss_pred EEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 469 LIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 469 lVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
+|+|..+|..+.+.+ |++++|.|+++++++|.++|.+..+.+....+..+++..+
T Consensus 138 vI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 138 PIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp EEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 899988777766643 8999999999999999999998776655444444444443
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=2.3e-17 Score=184.72 Aligned_cols=185 Identities=17% Similarity=0.250 Sum_probs=132.8
Q ss_pred EEEEeecccCchhhhhhhccc-hh-hhc-----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcC
Q psy775 313 RIRPLPIAIPYERFVQLAQAA-PR-VID-----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 385 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~-~~-~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~p 385 (1460)
++.++|+|||++.+....... .. .++ .++++++++||+.+.||+..+++|++++.+++|+.. ++.++..
T Consensus 160 ~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~ii~g~ 235 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQ 235 (370)
T ss_dssp GEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESS
T ss_pred eEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eeecccc
Confidence 466899999998765432211 11 111 578899999999999999999999999988877642 3334422
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCC
Q psy775 386 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEP 465 (1460)
Q Consensus 386 sr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~ 465 (1460)
. ..+ ++++++.+.+.. ..+++ .|.. +++..+|+.||++++||..||||++++|||||
T Consensus 236 ~--~~~-------~~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~----- 292 (370)
T d2iw1a1 236 D--KPR-------KFEALAEKLGVR------SNVHF-FSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITA----- 292 (370)
T ss_dssp S--CCH-------HHHHHHHHHTCG------GGEEE-ESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-----
T ss_pred c--ccc-------cccccccccccc------ccccc-cccc--cccccccccccccccccccccccceeeecccC-----
Confidence 2 111 223334444332 12444 4643 57899999999999999999999999999999
Q ss_pred CCeEEEcCCCCchhcccc---c-EEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 466 PGVLIVSPFAGAGEQMHE---A-LICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 466 ~GvlVlSe~aGaa~~L~~---a-llVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|.|+|+|..+|..+.+.+ | ++++|.|++++|++|.++|++++..+++. +..++.++.++
T Consensus 293 G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~-~~ar~~~~~~~ 355 (370)
T d2iw1a1 293 GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWA-ENARHYADTQD 355 (370)
T ss_dssp TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHHHSC
T ss_pred CeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHHHhC
Confidence 677899999998888743 5 45689999999999999999765544444 34456666665
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=4.4e-17 Score=182.42 Aligned_cols=175 Identities=15% Similarity=0.201 Sum_probs=131.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|++++.+++|+. .++.++.... . +++++++++.+..-
T Consensus 193 ~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~----~~~ii~g~~~--~-------~~~~~~~~~~~~~~------- 252 (370)
T d2iw1a1 193 EQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK--P-------RKFEALAEKLGVRS------- 252 (370)
T ss_dssp TTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC--C-------HHHHHHHHHHTCGG-------
T ss_pred ccceEEEEEeccccccchhhhcccccccccccccc----eeeecccccc--c-------cccccccccccccc-------
Confidence 67899999999999999999999999998888764 3444443321 1 23445555555431
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|+. +++..+|+.||+++.||..|||+++++|||+| +.|+|+|..+|..+.+.
T Consensus 253 ~v~~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~-----G~PvI~s~~~g~~e~i~---------------- 309 (370)
T d2iw1a1 253 NVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITA-----GLPVLTTAVCGYAHYIA---------------- 309 (370)
T ss_dssp GEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-----TCCEEEETTSTTTHHHH----------------
T ss_pred cccccccc--cccccccccccccccccccccccceeeecccC-----CeeEEEeCCCChHHHhc----------------
Confidence 14445554 57899999999999999999999999999999 78999999999877221
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
++. .|.++++|.|++++|++|.++++++...+++. +..++++.
T Consensus 310 -----------------------------~~~-------~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~-~~ar~~~~ 352 (370)
T d2iw1a1 310 -----------------------------DAN-------CGTVIAEPFSQEQLNEVLRKALTQSPLRMAWA-ENARHYAD 352 (370)
T ss_dssp -----------------------------HHT-------CEEEECSSCCHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHH
T ss_pred -----------------------------CCC-------ceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHH
Confidence 111 23466789999999999999998765444444 44578888
Q ss_pred hcCHHHHHHHHHHHH
Q psy775 979 VHDVNYWMRSFLKGM 993 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~l 993 (1460)
+++...|.+...+-+
T Consensus 353 ~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 353 TQDLYSLPEKAADII 367 (370)
T ss_dssp HSCCSCHHHHHHHHH
T ss_pred HhChhHHHHHHHHHH
Confidence 888888987665544
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.68 E-value=1.9e-16 Score=167.20 Aligned_cols=163 Identities=18% Similarity=0.231 Sum_probs=121.2
Q ss_pred CCCEEEEEEcCcc-ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLD-YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd-~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
+++++|+++||++ +.||++..++|++.+.++.+.. ++.|+.+|.+ .+.++.+.+. +...+.
T Consensus 30 ~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G~g----~~~~~~~~~~---~~~~~~--------- 91 (196)
T d2bfwa1 30 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIGKG----DPELEGWARS---LEEKHG--------- 91 (196)
T ss_dssp CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEECCB----CHHHHHHHHH---HHHHCT---------
T ss_pred CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC--CeEEEEEeec----ccchhhhhhh---hhhccc---------
Confidence 4678899999997 5899999999999987654321 3667777643 1334333333 322221
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
-++++.+.++.+++..+|+.||+++.||..||++++.+|||+| +.|+|+|..+|..+.+
T Consensus 92 ~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~-----G~pvI~~~~~~~~e~i---------------- 150 (196)
T d2bfwa1 92 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-----GAIPIASAVGGLRDII---------------- 150 (196)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-----TCEEEEESCHHHHHHC----------------
T ss_pred eeEEeeeccccccchhccccccccccccccccccccchhhhhc-----CceeeecCCCccceee----------------
Confidence 2477889999999999999999999999999999999999999 7899999877655411
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
.+ ..+++++|.|+++++++|.++|.+..+.+....+..+++.
T Consensus 151 ------------------------------~~--------~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a 192 (196)
T d2bfwa1 151 ------------------------------TN--------ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA 192 (196)
T ss_dssp ------------------------------CT--------TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------cC--------CceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 00 2458999999999999999999987766554444444444
Q ss_pred H
Q psy775 978 K 978 (1460)
Q Consensus 978 ~ 978 (1460)
.
T Consensus 193 ~ 193 (196)
T d2bfwa1 193 M 193 (196)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.52 E-value=1.4e-14 Score=148.97 Aligned_cols=140 Identities=17% Similarity=0.282 Sum_probs=108.9
Q ss_pred eEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q psy775 342 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 421 (1460)
Q Consensus 342 kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~ 421 (1460)
.+++++||+.+.||+..+++|++++ |+.+ ++.+|..+ +.+.++.+.+++... .. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~----~~-------~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI----AP-------DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH----SC-------TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc----cc-------CcEEE
Confidence 5688999999999999999999775 5543 44455443 233444455544332 11 13455
Q ss_pred EcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHH
Q psy775 422 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEV 498 (1460)
Q Consensus 422 ~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~A 498 (1460)
.|.++.+++..+|+.||+++.||..||+|++++|||+| +.|+|+|..+|..+.+.+ |+++++ |+++++++
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~-----g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~ 144 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-----GKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDA 144 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-----TCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHH
T ss_pred -eecccccccccccccccccccccccccccccccccccc-----cccceeecCCcceeeecCCcccccCCC-CHHHHHHH
Confidence 59999999999999999999999999999999999999 677899999888877743 676665 99999999
Q ss_pred HHHHcCCCHHH
Q psy775 499 IHRALTMPEDE 509 (1460)
Q Consensus 499 I~~aL~m~~~e 509 (1460)
|.+++++++..
T Consensus 145 i~~l~~~~~~~ 155 (166)
T d2f9fa1 145 MKKVSKNPDKF 155 (166)
T ss_dssp HHHHHHCTTTT
T ss_pred HHHHHhCHHHH
Confidence 99999987543
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.41 E-value=2.3e-13 Score=139.83 Aligned_cols=142 Identities=18% Similarity=0.278 Sum_probs=106.5
Q ss_pred EEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q psy775 742 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 821 (1460)
Q Consensus 742 kiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~ 821 (1460)
..++++||+++.||+...++|++++ |+. .|+.+|.++. .+.++.+.+++.+ .... - +.
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~----~l~ivg~~~~--~~~~~~~~~~~~~----~~~~-------~-v~ 70 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSK--GDHAERYARKIMK----IAPD-------N-VK 70 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCT--TSTHHHHHHHHHH----HSCT-------T-EE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCC----eEEEEEeccc--ccchhhhhhhhcc----cccC-------c-EE
Confidence 4578999999999999999999765 554 3455555432 2334444444432 1111 1 55
Q ss_pred EcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhc
Q psy775 822 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFC 901 (1460)
Q Consensus 822 ~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~ 901 (1460)
+.|.++.+++..+|+.||+++.||..||++++.+|||+| +.|+|+|..+|..+.+
T Consensus 71 ~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~-----g~pvi~s~~~~~~e~i-------------------- 125 (166)
T d2f9fa1 71 FLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-----GKPVIAVNEGGFKETV-------------------- 125 (166)
T ss_dssp EEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-----TCCEEEESSHHHHHHC--------------------
T ss_pred Eeecccccccccccccccccccccccccccccccccccc-----cccceeecCCcceeee--------------------
Confidence 568999999999999999999999999999999999999 7899999998876611
Q ss_pred cccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 902 PYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 902 ~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
.+. ..++++++ |+++++++|.++++++..
T Consensus 126 -------------------------~~~--------~~g~~~~~-d~~~~~~~i~~l~~~~~~ 154 (166)
T d2f9fa1 126 -------------------------INE--------KTGYLVNA-DVNEIIDAMKKVSKNPDK 154 (166)
T ss_dssp -------------------------CBT--------TTEEEECS-CHHHHHHHHHHHHHCTTT
T ss_pred -------------------------cCC--------cccccCCC-CHHHHHHHHHHHHhCHHH
Confidence 111 23466665 999999999999998754
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.00 E-value=1.5e-10 Score=126.20 Aligned_cols=103 Identities=19% Similarity=0.234 Sum_probs=79.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccc-cceeEccCCcccccCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIE-GLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~-~~~~ig~hGaei~~~g~ 115 (1460)
++|||+||||++. +...+|+.+++||++|+++ |+.+++||||+...+.... ... ...++++||+.+..+++
T Consensus 3 ~if~DlDGTL~~~----~~~~i~~~~~~al~~l~~~-gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 3 ALFFDIDGTLVSF----ETHRIPSSTIEALEAAHAK-GLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp EEEECSBTTTBCT----TTSSCCHHHHHHHHHHHHT-TCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred EEEEECCCCCcCC----CCCCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 7899999999973 4556999999999999999 9999999999987765432 333 34678999999999988
Q ss_pred CccccCCCccchhhhhhHHHhhccCceeeecCcc
Q psy775 116 SRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPK 149 (1460)
Q Consensus 116 ~i~~~pI~ee~vdeL~ii~~L~q~~~~pVfLdee 149 (1460)
.++...++.+....+ ...+.++++..++...+
T Consensus 78 ~i~~~~l~~~~~~~i--~~~~~~~~~~~~~~~~~ 109 (260)
T d2rbka1 78 VIYKSAIPQEEVKAM--AAFCEKKGVPCIFVEEH 109 (260)
T ss_dssp EEEECCCCHHHHHHH--HHHHHHHTCCEEEECSS
T ss_pred cccccCCCHHHHHHH--HHHHHHcCCcEEEEecC
Confidence 889999999877665 33445555544444443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.85 E-value=9e-10 Score=115.51 Aligned_cols=78 Identities=21% Similarity=0.339 Sum_probs=66.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCccc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFV 119 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i~~ 119 (1460)
+||||+||||+++..+|+...++++++++|++|+++ +.|+|+|||++..+...... ...++|+||+.+..+++..+.
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~--~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~~~~~~~~~~ 78 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER--FDTYIVTGRSPEEISRFLPL-DINMICYHGACSKINGQIVYN 78 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH--SEEEEECSSCHHHHHHHSCS-SCEEEEGGGTEEEETTEEEEC
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhhC--CCEEEEcCCCHHHhhhhcCc-cccEEecCeEEEecCCceeee
Confidence 799999999999999999999999999999999975 56999999999888766643 345789999998888766544
Q ss_pred c
Q psy775 120 H 120 (1460)
Q Consensus 120 ~ 120 (1460)
.
T Consensus 79 ~ 79 (229)
T d1u02a_ 79 N 79 (229)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.81 E-value=3e-09 Score=116.13 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=73.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCC-CC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPD-GS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g-~~ 116 (1460)
++|||+||||++ ++..+|++++++|++|+++ |+++++||||++..+.+.+..-+ ..+++.||+.+...+ +.
T Consensus 3 li~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~-Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 3 LIAIDLDGTLLN-----SKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp EEEEECCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred EEEEECCccccC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 699999999996 3356899999999999999 99999999999888776664322 357899999998754 56
Q ss_pred ccccCCCccchhhhhhHHHhhccCc
Q psy775 117 RFVHPIPTEFEDKVSDLLKTLQEKV 141 (1460)
Q Consensus 117 i~~~pI~ee~vdeL~ii~~L~q~~~ 141 (1460)
++..+++.+...++ ...+.+++.
T Consensus 77 i~~~~i~~~~~~~i--~~~~~~~~~ 99 (285)
T d1nrwa_ 77 YHHETIDKKRAYDI--LSWLESENY 99 (285)
T ss_dssp EEECCCCHHHHHHH--HHHHHHTTC
T ss_pred eeeccCCHHHHHHH--HHHHHHcCC
Confidence 78888999877666 333444443
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=6.5e-09 Score=109.01 Aligned_cols=73 Identities=21% Similarity=0.307 Sum_probs=60.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccC
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHP 113 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~ 113 (1460)
.+.++|+|+||||++ ....+++.+++||++|+++ |+.+++||||+...+.+.+ ++.+..++++||+.+...
T Consensus 3 ~~~li~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~ 76 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLD-----SHSYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLA 76 (232)
T ss_dssp CCEEEEEECTTTTSC-----SSCCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECC
T ss_pred CCEEEEEECCCCccC-----CcCcCCHHHHHHHHHHHHC-CCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEec
Confidence 356899999999996 2346899999999999999 9999999999988876655 445566899999998866
Q ss_pred CC
Q psy775 114 DG 115 (1460)
Q Consensus 114 g~ 115 (1460)
+.
T Consensus 77 ~~ 78 (232)
T d1xvia_ 77 EQ 78 (232)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=1.2e-08 Score=110.63 Aligned_cols=85 Identities=14% Similarity=0.158 Sum_probs=65.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cc--ccceeEccCCccccc--
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GI--EGLTYAGNHGLEIIH-- 112 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~--~~~~~ig~hGaei~~-- 112 (1460)
++|||+||||++ .+..++++++++|++|+++ |+.+++||||++..+.+.+ ++ +...++++||+.+..
T Consensus 6 li~~DlDGTL~~-----~~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~ 79 (271)
T d1rkqa_ 6 LIAIDMDGTLLL-----PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAA 79 (271)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETT
T ss_pred EEEEeCCccccC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccC
Confidence 589999999986 3456899999999999999 9999999999988876554 23 234578999998863
Q ss_pred CCCCccccCCCccchhhh
Q psy775 113 PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL 130 (1460)
+++.++..+++.+....+
T Consensus 80 ~~~~i~~~~~~~~~~~~i 97 (271)
T d1rkqa_ 80 DGSTVAQTALSYDDYRFL 97 (271)
T ss_dssp TCCEEEECCBCHHHHHHH
T ss_pred CCeEEEeecccHHHHHHH
Confidence 445666677777654444
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=6e-09 Score=113.11 Aligned_cols=82 Identities=12% Similarity=0.187 Sum_probs=64.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc-c-cceeEccCCcccccCCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI-E-GLTYAGNHGLEIIHPDGSR 117 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~-~-~~~~ig~hGaei~~~g~~i 117 (1460)
++|||+||||+.. +...+++.++++|++|+++ |+.+++||||+...+.+.+.- . ...++++||+.+..+++.+
T Consensus 4 li~~DlDGTLl~~----~~~~~~~~~~~~l~~l~~~-gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (269)
T d1rlma_ 4 VIVTDMDGTFLND----AKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQL 78 (269)
T ss_dssp EEEECCCCCCSCT----TSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEE
T ss_pred EEEEeCCccCcCC----CCcCChHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEE
Confidence 6899999999862 2233457899999999999 999999999999888776642 2 2367899999999988776
Q ss_pred cccCCCccc
Q psy775 118 FVHPIPTEF 126 (1460)
Q Consensus 118 ~~~pI~ee~ 126 (1460)
+...+..+.
T Consensus 79 ~~~~~~~~~ 87 (269)
T d1rlma_ 79 FHGELTRHE 87 (269)
T ss_dssp EECCCCHHH
T ss_pred EEeccchHH
Confidence 666665543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.66 E-value=1.5e-08 Score=110.27 Aligned_cols=93 Identities=22% Similarity=0.320 Sum_probs=70.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccCC-C
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHPD-G 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~g-~ 115 (1460)
++|||+||||++ .+..+++.+++||++|++. | .++++|||++..+...+ ......++++||+.+..++ +
T Consensus 4 li~~DlDGTL~~-----~~~~i~~~~~~al~~l~~~-~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~ 76 (267)
T d1nf2a_ 4 VFVFDLDGTLLN-----DNLEISEKDRRNIEKLSRK-C-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (267)
T ss_dssp EEEEECCCCCSC-----TTSCCCHHHHHHHHHHTTT-S-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred EEEEeCCccccC-----CcCccCHHHHHHHHHHHcC-C-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence 689999999996 3456999999999999976 4 79999999987766554 2334457899999988755 4
Q ss_pred CccccCCCccchhhhhhHHHhhccCc
Q psy775 116 SRFVHPIPTEFEDKVSDLLKTLQEKV 141 (1460)
Q Consensus 116 ~i~~~pI~ee~vdeL~ii~~L~q~~~ 141 (1460)
.++..+++.+.+..+ ...+.++++
T Consensus 77 ~i~~~~i~~~~~~~i--~~~~~~~~~ 100 (267)
T d1nf2a_ 77 VILNEKIPPEVAKDI--IEYIKPLNV 100 (267)
T ss_dssp EEEECCBCHHHHHHH--HHHHGGGCC
T ss_pred cccccCCCHHHHHHH--HHHHHhcCc
Confidence 578888988776665 334444444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.47 E-value=5.7e-08 Score=102.75 Aligned_cols=71 Identities=21% Similarity=0.257 Sum_probs=57.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc--cceeEccCCcccccCCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE--GLTYAGNHGLEIIHPDGSR 117 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~--~~~~ig~hGaei~~~g~~i 117 (1460)
++|+|+||||++. ..++.+++||++|+++ |+.+++||||++..+...+..- ...++++||+.+...++..
T Consensus 4 li~~DlDGTLl~~-------~~~~~~~~ai~~l~~~-G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 75 (243)
T d1wzca1 4 LIFLDIDKTLIPG-------YEPDPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (243)
T ss_dssp EEEECCBTTTBSS-------SCSGGGHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCC
T ss_pred EEEEeCCCCCCCC-------CCCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCce
Confidence 7999999999851 2368899999999999 9999999999988877666321 2357899999998877653
Q ss_pred c
Q psy775 118 F 118 (1460)
Q Consensus 118 ~ 118 (1460)
.
T Consensus 76 ~ 76 (243)
T d1wzca1 76 P 76 (243)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.42 E-value=6.2e-08 Score=101.68 Aligned_cols=86 Identities=22% Similarity=0.248 Sum_probs=61.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc----cccceeEccCCcccccC
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG----IEGLTYAGNHGLEIIHP 113 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~----~~~~~~ig~hGaei~~~ 113 (1460)
+-+++||+||||++ ++..+++++++||++|+++ | .++++|||+...+..... ......+.++|+.+...
T Consensus 3 ~kl~~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~-g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T d2amya1 3 PALCLFDVDGTLTA-----PRQKITKEMDDFLQKLRQK-I-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 75 (243)
T ss_dssp SEEEEEESBTTTBC-----TTSCCCHHHHHHHHHHTTT-S-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CEEEEEcCcCCeeC-----CCCcCCHHHHHHHHHHHcC-C-CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecC
Confidence 44667799999996 3467999999999999987 6 588999999777655442 22344445567777777
Q ss_pred CCCccccCCCccchhhh
Q psy775 114 DGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 114 g~~i~~~pI~ee~vdeL 130 (1460)
++.++..+++++.....
T Consensus 76 ~~~~~~~~~~~~~~~~~ 92 (243)
T d2amya1 76 GKLLCRQNIQSHLGEAL 92 (243)
T ss_dssp TEEEEECCHHHHHCHHH
T ss_pred CccceecchhHHHHHHH
Confidence 77777777666554443
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.42 E-value=1.9e-07 Score=100.97 Aligned_cols=86 Identities=21% Similarity=0.274 Sum_probs=65.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc--------cccceeEccCCcccc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG--------IEGLTYAGNHGLEII 111 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~--------~~~~~~ig~hGaei~ 111 (1460)
++|||+||||+.. ....+++.++++|++|+++ |+.+++||||++..+...+. ......++.||+.+.
T Consensus 12 li~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~-Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~ 86 (283)
T d2b30a1 12 LLLIDFDGTLFVD----KDIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVY 86 (283)
T ss_dssp EEEEETBTTTBCC----TTTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEE
T ss_pred EEEEECCCCCcCC----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEE
Confidence 8999999999852 3456999999999999999 99999999999888766552 122345788898877
Q ss_pred cCC-CCccccCCCccchhhh
Q psy775 112 HPD-GSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 112 ~~g-~~i~~~pI~ee~vdeL 130 (1460)
... ..++...++......+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~ 106 (283)
T d2b30a1 87 DQIGYTLLDETIETDVYAEL 106 (283)
T ss_dssp CTTCCEEEECCCCHHHHHHH
T ss_pred cCCCcEeeecccCHHHHHHH
Confidence 544 4566677777665554
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.32 E-value=1.7e-07 Score=97.90 Aligned_cols=77 Identities=17% Similarity=0.253 Sum_probs=61.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc--cceeEccCCcccccCCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE--GLTYAGNHGLEIIHPDGSR 117 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~--~~~~ig~hGaei~~~g~~i 117 (1460)
+++||+||||++ ....++++++++|++|+++ |+.|+++|||+...+....... ...+++.||+.+...+...
T Consensus 4 ~i~~D~DGTL~~-----~~~~i~~~~~~~l~~l~~~-gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~ 77 (230)
T d1wr8a_ 4 AISIDIDGTITY-----PNRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 77 (230)
T ss_dssp EEEEESTTTTBC-----TTSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred EEEEecCCCCcC-----CCCccCHHHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeecccccc
Confidence 789999999985 3556899999999999999 9999999999988877665322 2346789999888777654
Q ss_pred cccCC
Q psy775 118 FVHPI 122 (1460)
Q Consensus 118 ~~~pI 122 (1460)
+....
T Consensus 78 ~~~~~ 82 (230)
T d1wr8a_ 78 FLASM 82 (230)
T ss_dssp ESCCC
T ss_pred ccccc
Confidence 44433
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.26 E-value=3e-07 Score=95.81 Aligned_cols=58 Identities=24% Similarity=0.445 Sum_probs=52.8
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~ 1456 (1460)
++|||+||||++...+|+...+++.+.++|++|.+. +.|+|+|||+...+....+...
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~--~~v~i~TGR~~~~l~~~~~~~~ 59 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER--FDTYIVTGRSPEEISRFLPLDI 59 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH--SEEEEECSSCHHHHHHHSCSSC
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhhC--CCEEEEcCCCHHHhhhhcCccc
Confidence 789999999999999999999999999999999875 5799999999999998876543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.16 E-value=5e-07 Score=95.49 Aligned_cols=71 Identities=23% Similarity=0.394 Sum_probs=56.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccCCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHPDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~g~~ 116 (1460)
+++||+||||++ .+..+++++.++|++|+++ |+.++++|||++..+.... ++.. .+++.||+.+..+++.
T Consensus 5 li~~D~DGTL~~-----~~~~i~~~~~~al~~l~~~-g~~v~~~TGr~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 5 LAAIDVDGNLTD-----RDRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGING-PVFGENGGIMFDNDGS 77 (225)
T ss_dssp EEEEEHHHHSBC-----TTSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCS-CEEEGGGTEEECTTSC
T ss_pred EEEEecCCCCcC-----CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCchhhhHHHHHHcCCCc-eEEeecceEEEeCCcc
Confidence 688999999996 3456899999999999999 9999999999987655443 3333 3678899888776654
Q ss_pred c
Q psy775 117 R 117 (1460)
Q Consensus 117 i 117 (1460)
+
T Consensus 78 ~ 78 (225)
T d1l6ra_ 78 I 78 (225)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=7.8e-07 Score=92.74 Aligned_cols=80 Identities=21% Similarity=0.196 Sum_probs=56.2
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh-cc-----ccceeEccCCccccc
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV-GI-----EGLTYAGNHGLEIIH 112 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l-~~-----~~~~~ig~hGaei~~ 112 (1460)
.+++||+||||++ ++..++++++++|++|+++ |+ ++++|||....+...+ .. .....++++|+.+..
T Consensus 2 ~i~lFDlDGTLl~-----~~~~is~~~~~~i~~l~~~-g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 74 (244)
T d2fuea1 2 VLCLFDVDGTLTP-----ARQKIDPEVAAFLQKLRSR-VQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYK 74 (244)
T ss_dssp EEEEEESBTTTBS-----TTSCCCHHHHHHHHHHTTT-SE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEE
T ss_pred EEEEEccccCccC-----CCCcCCHHHHHHHHHHHhC-CC-EEEEecCChhhhhhhhhhhhccccccceeecccceeecc
Confidence 4566799999996 3457899999999999998 76 5677777655543322 21 234567889998888
Q ss_pred CCCCccccCCCcc
Q psy775 113 PDGSRFVHPIPTE 125 (1460)
Q Consensus 113 ~g~~i~~~pI~ee 125 (1460)
.++..+.+.+...
T Consensus 75 ~~~~~~~~~~~~~ 87 (244)
T d2fuea1 75 HGRLLSKQTIQNH 87 (244)
T ss_dssp TTEECCCCCHHHH
T ss_pred CCccceeechhHH
Confidence 7766665554443
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.93 E-value=1.4e-06 Score=92.98 Aligned_cols=71 Identities=24% Similarity=0.286 Sum_probs=53.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccc-cceeEccCCccccc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIE-GLTYAGNHGLEIIH 112 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~-~~~~ig~hGaei~~ 112 (1460)
++.++|+|+||||++. .. . ++..+++.+++++ |+.++++|||++..+...+ ++. ...++++||+.+..
T Consensus 2 ~~~li~~DlDGTL~~~-----~~-~-~~~~~~~~~~~~~-g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~ 73 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGD-----QQ-A-LEHLQEYLGDRRG-NFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYH 73 (244)
T ss_dssp CSEEEEECTBTTTBSC-----HH-H-HHHHHHHHHTTGG-GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEE
T ss_pred CceEEEEECcccCCCC-----CC-C-HHHHHHHHHHHcC-CCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEE
Confidence 3678999999999862 11 2 2456677778887 9999999999988876665 332 23578999999887
Q ss_pred CCC
Q psy775 113 PDG 115 (1460)
Q Consensus 113 ~g~ 115 (1460)
..+
T Consensus 74 ~~~ 76 (244)
T d1s2oa1 74 PEG 76 (244)
T ss_dssp TTE
T ss_pred ccC
Confidence 654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.71 E-value=1.8e-05 Score=77.83 Aligned_cols=51 Identities=25% Similarity=0.337 Sum_probs=42.4
Q ss_pred CCcEEEEEecCCCcCCCCCCCC-------CccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 36 TNKLALLLDYDGTLAPIAPHPD-------MAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~-------~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
+++-+++||+||||++...... .+.+-|++.++|+.|+++ |+.++++|||+
T Consensus 5 ~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~-G~~Iii~T~R~ 62 (149)
T d1ltqa1 5 GKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRE 62 (149)
T ss_dssp TSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred CCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhc-cCeEEEEecCc
Confidence 4556999999999987644321 356788999999999999 99999999998
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.00012 Score=75.54 Aligned_cols=53 Identities=19% Similarity=0.238 Sum_probs=44.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+++++|+|+||||.. + ...+++.+.++|++|.++ |+.++++|||+...+.+++
T Consensus 3 ~~~li~~DlDGTLl~----~-~~~i~~~~~~al~~l~~~-Gi~~~i~TGR~~~~~~~~~ 55 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLD----S-HSYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQ 55 (232)
T ss_dssp CCEEEEEECTTTTSC----S-SCCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHH
T ss_pred CCEEEEEECCCCccC----C-cCcCCHHHHHHHHHHHHC-CCEEEEEeCCChhhchhHH
Confidence 467899999999983 2 346888999999999876 6899999999998877665
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.00022 Score=76.20 Aligned_cols=50 Identities=20% Similarity=0.309 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.+ ..-.+++.+.++|++|.++ +++++++|||+...+.+++
T Consensus 6 li~~DlDGTL~~-----~~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~ 55 (271)
T d1rkqa_ 6 LIAIDMDGTLLL-----PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYL 55 (271)
T ss_dssp EEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHH
T ss_pred EEEEeCCccccC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHH
Confidence 489999999974 2346889999999999887 7899999999988776543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.99 E-value=0.00032 Score=72.30 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=42.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.. ....+++.+..+|++|.+. ++.++++|||+...+..+.
T Consensus 4 ~i~~D~DGTL~~-----~~~~i~~~~~~~l~~l~~~-gi~v~~~TGR~~~~~~~~~ 53 (230)
T d1wr8a_ 4 AISIDIDGTITY-----PNRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAAS 53 (230)
T ss_dssp EEEEESTTTTBC-----TTSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHH
T ss_pred EEEEecCCCCcC-----CCCccCHHHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHH
Confidence 689999999974 3566889999999999876 6899999999998887654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=96.97 E-value=0.00043 Score=73.88 Aligned_cols=52 Identities=27% Similarity=0.450 Sum_probs=44.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
++++|+||||.. +....+++.++++|++|.+. |+.++++|||+...+..+++
T Consensus 12 li~~DlDGTLl~----~~~~~i~~~~~~al~~l~~~-Gi~v~i~TGR~~~~~~~~~~ 63 (283)
T d2b30a1 12 LLLIDFDGTLFV----DKDIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFG 63 (283)
T ss_dssp EEEEETBTTTBC----CTTTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHC
T ss_pred EEEEECCCCCcC----CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHH
Confidence 899999999973 22467899999999999776 78999999999998877654
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.91 E-value=0.00033 Score=67.99 Aligned_cols=49 Identities=20% Similarity=0.207 Sum_probs=41.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
-+++||||||+... .+..+.+-+++++.|++|.+. |+.++|.|+|+...
T Consensus 2 ti~vDiDGTl~~~~-~~~~~kPi~~~Ie~l~~L~~~-G~~IIi~TaR~~~~ 50 (122)
T d2obba1 2 TIAVDFDGTIVEHR-YPRIGEEIPFAVETLKLLQQE-KHRLILWSVREGEL 50 (122)
T ss_dssp EEEECCBTTTBCSC-TTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHH
T ss_pred EEEEEcCCCcCCCC-CCccccccHHHHHHHHHHHHC-CCeEEEEecCCCcc
Confidence 37899999998753 455667788999999999999 99999999998543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.00039 Score=74.25 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=42.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
++|+|+||||.. +....++|.+.++|++|.++ ++.++++|||+...+..++.
T Consensus 4 li~~DlDGTLl~----~~~~~~~~~~~~~l~~l~~~-gi~~~i~TGR~~~~~~~~~~ 55 (269)
T d1rlma_ 4 VIVTDMDGTFLN----DAKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFP 55 (269)
T ss_dssp EEEECCCCCCSC----TTSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCT
T ss_pred EEEEeCCccCcC----CCCcCChHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHH
Confidence 689999999974 33344567899999999887 67999999999999887664
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.76 E-value=0.00072 Score=72.47 Aligned_cols=50 Identities=22% Similarity=0.388 Sum_probs=43.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.. +.-.+++.+.++|++|.+. |+.++++|||+...+..++
T Consensus 3 li~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~-Gi~~~i~TGR~~~~~~~~~ 52 (285)
T d1nrwa_ 3 LIAIDLDGTLLN-----SKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIF 52 (285)
T ss_dssp EEEEECCCCCSC-----TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred EEEEECCccccC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHH
Confidence 689999999993 2356899999999999887 7899999999999887765
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.0012 Score=67.98 Aligned_cols=50 Identities=32% Similarity=0.509 Sum_probs=40.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
+++||+||||.+ +...+++.++++|++|.+. +.++++|||+...+.....
T Consensus 5 l~~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~--g~~~i~Tgr~~~~~~~~~~ 54 (243)
T d2amya1 5 LCLFDVDGTLTA-----PRQKITKEMDDFLQKLRQK--IKIGVVGGSDFEKVQEQLG 54 (243)
T ss_dssp EEEEESBTTTBC-----TTSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHC
T ss_pred EEEEcCcCCeeC-----CCCcCCHHHHHHHHHHHcC--CCEEEEcCCChHHhHHHHh
Confidence 555699999973 3568899999999999764 3689999999988876543
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.66 E-value=0.00066 Score=65.99 Aligned_cols=48 Identities=25% Similarity=0.347 Sum_probs=40.6
Q ss_pred EEEEecCCCcCCCCCC-CCCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 40 ALLLDYDGTLAPIAPH-PDMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~-p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
.++|||||||+..... ...+.+-+.+++.|+.|.+. |+.++|.|+|..
T Consensus 3 ~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~-G~~Iii~TaR~~ 51 (124)
T d1xpja_ 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARNM 51 (124)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTTT
T ss_pred EEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 3789999999875432 44677889999999999999 999999999963
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.62 E-value=0.0011 Score=71.05 Aligned_cols=49 Identities=27% Similarity=0.464 Sum_probs=40.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.+ ..-.+++.+.++|++|.+. +.++++|||+...+.+.+
T Consensus 4 li~~DlDGTL~~-----~~~~i~~~~~~al~~l~~~--~~~~i~TGR~~~~~~~~~ 52 (267)
T d1nf2a_ 4 VFVFDLDGTLLN-----DNLEISEKDRRNIEKLSRK--CYVVFASGRMLVSTLNVE 52 (267)
T ss_dssp EEEEECCCCCSC-----TTSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHH
T ss_pred EEEEeCCccccC-----CcCccCHHHHHHHHHHHcC--CEEEEECCCChHHHHHHH
Confidence 689999999974 2356899999999999864 579999999987766644
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.60 E-value=0.00077 Score=71.89 Aligned_cols=48 Identities=29% Similarity=0.388 Sum_probs=41.2
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 1449 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~ 1449 (1460)
++|+|+||||.+ ++.-.+++.+.++|++|.+. |+.++++|||+...+.
T Consensus 3 ~if~DlDGTL~~----~~~~~i~~~~~~al~~l~~~-gi~v~~~TGR~~~~~~ 50 (260)
T d2rbka1 3 ALFFDIDGTLVS----FETHRIPSSTIEALEAAHAK-GLKIFIATGRPKAIIN 50 (260)
T ss_dssp EEEECSBTTTBC----TTTSSCCHHHHHHHHHHHHT-TCEEEEECSSCGGGCC
T ss_pred EEEEECCCCCcC----CCCCCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHH
Confidence 689999999974 45667899999999999987 6899999999987654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.51 E-value=0.0016 Score=63.47 Aligned_cols=51 Identities=27% Similarity=0.372 Sum_probs=41.8
Q ss_pred CCcEEEEEecCCCCCCCCCCC-------CCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1393 TNKLALLLDYDGTLAPIAPHP-------DMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLapi~~~P-------~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++-+++||+||||+...... ..+.+.|++.+.|+.|.+. |..++++|||+
T Consensus 5 ~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~-G~~Iii~T~R~ 62 (149)
T d1ltqa1 5 GKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRE 62 (149)
T ss_dssp TSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred CCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhc-cCeEEEEecCc
Confidence 345689999999998765542 2467889999999999876 67999999998
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.00085 Score=68.57 Aligned_cols=48 Identities=17% Similarity=0.311 Sum_probs=40.7
Q ss_pred EEEEEecCCCcCC---CCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 39 LALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 39 ~~lFfDiDGTL~~---~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
.|||||.||||.. ....+++..+-|++.++|+.|+++ |+.++|+|..+
T Consensus 3 ~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~-g~~~~ivTNq~ 53 (182)
T d2gmwa1 3 PAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQS 53 (182)
T ss_dssp CEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECT
T ss_pred CEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhhc-Cchhhhhhccc
Confidence 4899999999964 233455677889999999999999 99999999976
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.40 E-value=0.00092 Score=69.70 Aligned_cols=54 Identities=20% Similarity=0.386 Sum_probs=42.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhH---HHhcCCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV---MEMVGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l---~~~~~~~~ 1456 (1460)
++++|+||||.. + .-.+++++.++|++|.+. +++++++|||+...+ ...+|+..
T Consensus 5 li~~D~DGTL~~----~-~~~i~~~~~~al~~l~~~-g~~v~~~TGr~~~~~~~~~~~~~~~~ 61 (225)
T d1l6ra_ 5 LAAIDVDGNLTD----R-DRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGING 61 (225)
T ss_dssp EEEEEHHHHSBC----T-TSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred EEEEecCCCCcC----C-CCcCCHHHHHHHHHHHHC-CCEEEEEcCCchhhhHHHHHHcCCCc
Confidence 688999999983 2 356789999999999986 679999999998744 44556544
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.36 E-value=0.00076 Score=71.03 Aligned_cols=49 Identities=20% Similarity=0.342 Sum_probs=41.0
Q ss_pred cEEEEEecCCCcCC---CCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 38 KLALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~---~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
..|+|||.||||.. ...++++..+-|++.++|++|+++ |++++|+|..+
T Consensus 23 ~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~-G~~l~IvTNQ~ 74 (209)
T d2o2xa1 23 LPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQS 74 (209)
T ss_dssp CCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECH
T ss_pred CCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhh-CCeEEEecccc
Confidence 35899999999965 334455677889999999999999 99999999754
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.16 E-value=0.002 Score=64.98 Aligned_cols=48 Identities=23% Similarity=0.282 Sum_probs=39.2
Q ss_pred EEEEEecCCCcCCCC------CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 39 LALLLDYDGTLAPIA------PHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~------~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
=++|||.||||..-. ..++...+.|++.++|++|+++ |++++|+|..+
T Consensus 3 K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~i~TNq~ 56 (161)
T d2fpwa1 3 KYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQD 56 (161)
T ss_dssp EEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEECT
T ss_pred cEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHc-CCceeeecccc
Confidence 389999999998632 2234556788999999999999 99999999764
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.96 E-value=0.0021 Score=68.41 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=37.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCC---chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR---NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR---~~~~l~~~l 95 (1460)
++|||+||||.+. ...+ +.+.++|++|+++ |.++++||++ +..++.+.+
T Consensus 4 ~v~fDlDGTL~~~-----~~~i-~~a~~~i~~l~~~-g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 4 GYLIDLDGTIYLG-----KEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EEEECCBTTTEET-----TEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHHH
T ss_pred EEEEcCCCccEeC-----CCcC-ccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHH
Confidence 6999999999862 2234 6789999999999 9999999865 455554444
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.94 E-value=0.0023 Score=68.05 Aligned_cols=49 Identities=10% Similarity=0.222 Sum_probs=39.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
+|+||+||||.+. ...+ +++.++|++|+++ |++++++| +|+..++.+.+
T Consensus 5 ~VifDlDGTL~~~-----~~~i-~~a~e~i~~l~~~-g~~~~~~TN~~~~~~~~~~~~l 56 (250)
T d2c4na1 5 NVICDIDGVLMHD-----NVAV-PGAAEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRF 56 (250)
T ss_dssp EEEEECBTTTEET-----TEEC-TTHHHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHH
T ss_pred EEEEECCCeeEEC-----CCcC-ccHHHHHHHHHHC-CCcEEEEeCCCCCCHHHHHHHH
Confidence 7999999999862 2335 4789999999999 99999998 56777776655
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.94 E-value=0.0027 Score=63.38 Aligned_cols=50 Identities=24% Similarity=0.201 Sum_probs=38.6
Q ss_pred EEEEecCCCcCCCCCC-------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPH-------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~-------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
++.||.||||++.... .....+-|++.++|+.|+++ |+.++|||+.+...
T Consensus 7 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~-G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 7 LAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSL-GVPVAAASRTSEIQ 75 (164)
T ss_dssp EEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHT-TCCEEEEECCSCHH
T ss_pred EEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHC-CCcEEEEeccccch
Confidence 6899999999863211 11235678999999999999 99999999865433
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=95.63 E-value=0.002 Score=67.61 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=34.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++.++++|+||||.+ + .. .++.+++ +.++. ..++.++++|||+..++.+++
T Consensus 2 ~~~li~~DlDGTL~~----~-~~-~~~~~~~-~~~~~-~~g~~v~i~TGR~~~~~~~~~ 52 (244)
T d1s2oa1 2 RQLLLISDLDNTWVG----D-QQ-ALEHLQE-YLGDR-RGNFYLAYATGRSYHSARELQ 52 (244)
T ss_dssp CSEEEEECTBTTTBS----C-HH-HHHHHHH-HHHTT-GGGEEEEEECSSCHHHHHHHH
T ss_pred CceEEEEECcccCCC----C-CC-CHHHHHH-HHHHH-cCCCEEEEECCCCHHHHHHHH
Confidence 367899999999974 1 11 1233333 33333 336789999999999887765
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.48 E-value=0.0044 Score=65.92 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=37.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCC---chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR---NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR---~~~~l~~~l 95 (1460)
+++||+||||.+. ...+ +++.++|++|+++ |.+++++|++ +...+.+.+
T Consensus 9 ~vlFDlDGTL~~~-----~~~i-~~a~e~l~~l~~~-g~~~~~~TN~~~~~~~~~~~~~ 60 (261)
T d1vjra_ 9 LFILDMDGTFYLD-----DSLL-PGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKL 60 (261)
T ss_dssp EEEECCBTTTEET-----TEEC-TTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHH
T ss_pred EEEEeCCCeeEEC-----CccC-chHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHH
Confidence 7999999999863 2234 6888999999999 9999999965 444444433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.02 E-value=0.0014 Score=65.90 Aligned_cols=39 Identities=21% Similarity=0.282 Sum_probs=27.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME 93 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~ 93 (1460)
+++||+||||++ ++ ++++++..|+.++++|||+.-+..+
T Consensus 4 li~fDlDGTLl~------------e~---~~~~a~~~Gi~~~~~tgR~~~~~~~ 42 (206)
T d1rkua_ 4 IACLDLEGVLVP------------EI---WIAFAEKTGIDALKATTRDIPDYDV 42 (206)
T ss_dssp EEEEESBTTTBC------------CH---HHHHHHHHTCGGGGCCTTTCCCHHH
T ss_pred EEEEcCccchHH------------HH---HHHHHHHcCCHHHHHHCCCCCCHHH
Confidence 789999999984 23 3444433399999999997544333
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.74 E-value=0.015 Score=60.40 Aligned_cols=47 Identities=28% Similarity=0.321 Sum_probs=35.8
Q ss_pred EEEEEecCCCcCCC------CCCCCCcc-CChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 39 LALLLDYDGTLAPI------APHPDMAV-LPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~------~~~p~~a~-ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
-++|||.||||.-- ..++.+-. +.|++.++|+.|.++ |+.++|+|.-
T Consensus 22 Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~-gy~iiIvTNQ 75 (195)
T d1yj5a1 22 KVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQ 75 (195)
T ss_dssp CEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH-TCEEEEEEEC
T ss_pred cEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhC-CcEEEEecCc
Confidence 36677999999642 22233322 579999999999999 9999999974
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=94.67 E-value=0.013 Score=56.47 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=40.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
-+++|+||||+. ...|+.+.|-+.+.+.|+.|.+.- ..+.+.|+|+-.
T Consensus 2 ti~vDiDGTl~~-~~~~~~~kPi~~~Ie~l~~L~~~G-~~IIi~TaR~~~ 49 (122)
T d2obba1 2 TIAVDFDGTIVE-HRYPRIGEEIPFAVETLKLLQQEK-HRLILWSVREGE 49 (122)
T ss_dssp EEEECCBTTTBC-SCTTSCCCBCTTHHHHHHHHHHTT-CEEEECCSCCHH
T ss_pred EEEEEcCCCcCC-CCCCccccccHHHHHHHHHHHHCC-CeEEEEecCCCc
Confidence 478999999986 356778889999999999998763 489999999754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.50 E-value=0.0097 Score=63.17 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=38.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCC---chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR---NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR---~~~~l~~~l 95 (1460)
+++||+||||.+. ...+ |.+.++|+.|+++ |.+++++|+. +.+.+.+.+
T Consensus 4 ~vlFDlDGTL~~~-----~~~i-~~a~e~l~~l~~~-g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 4 GYLIDLDGTIYKG-----KDRI-PAGEDFVKRLQER-QLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp EEEEECBTTTEET-----TEEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHH
T ss_pred EEEEcCcCceEEC-----CCcC-ccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHH
Confidence 6899999999862 2224 7889999999999 9999999864 455555544
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.48 E-value=0.018 Score=58.55 Aligned_cols=32 Identities=38% Similarity=0.468 Sum_probs=25.5
Q ss_pred EEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcC
Q psy775 1396 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANL 1432 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~ 1432 (1460)
++++||+||||.+ +...+++++.++|++|.+.
T Consensus 2 ~i~lFDlDGTLl~-----~~~~is~~~~~~i~~l~~~ 33 (244)
T d2fuea1 2 VLCLFDVDGTLTP-----ARQKIDPEVAAFLQKLRSR 33 (244)
T ss_dssp EEEEEESBTTTBS-----TTSCCCHHHHHHHHHHTTT
T ss_pred EEEEEccccCccC-----CCCcCCHHHHHHHHHHHhC
Confidence 4555699999973 2457899999999999775
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=93.89 E-value=0.02 Score=57.90 Aligned_cols=47 Identities=17% Similarity=0.334 Sum_probs=41.3
Q ss_pred EEEEecCCCCCC---CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap---i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
|||||.||||.. ...+|++..+-|++.++|++|.+. +..++|||..+
T Consensus 4 Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~-g~~~~ivTNq~ 53 (182)
T d2gmwa1 4 AIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQS 53 (182)
T ss_dssp EEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECT
T ss_pred EEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhhc-Cchhhhhhccc
Confidence 899999999953 556788899999999999999886 57999999987
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.03 E-value=0.031 Score=55.88 Aligned_cols=47 Identities=23% Similarity=0.307 Sum_probs=40.0
Q ss_pred EEEEecCCCCCC------CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP------IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++|||.||||.. ....++...+.|++.++|+.|.+. +..++|+|..+
T Consensus 4 ~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~i~TNq~ 56 (161)
T d2fpwa1 4 YLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQD 56 (161)
T ss_dssp EEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEECT
T ss_pred EEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHc-CCceeeecccc
Confidence 688999999976 455667788899999999999887 57999999764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.98 E-value=0.041 Score=54.44 Aligned_cols=50 Identities=24% Similarity=0.201 Sum_probs=37.6
Q ss_pred EEEEecCCCCCCCCCC-------------------CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhh
Q psy775 1397 ALLLDYDGTLAPIAPH-------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 1447 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~-------------------P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~ 1447 (1460)
+++||+||||.+-..+ -+...+-|+++++|+.|.++ |.++||+|+.+...
T Consensus 7 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~-G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 7 LAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSL-GVPVAAASRTSEIQ 75 (164)
T ss_dssp EEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHT-TCCEEEEECCSCHH
T ss_pred EEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHC-CCcEEEEeccccch
Confidence 6899999999762111 11246778999999999887 57999999876544
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.07 E-value=0.035 Score=57.85 Aligned_cols=48 Identities=21% Similarity=0.342 Sum_probs=40.5
Q ss_pred cEEEEEecCCCCCC---CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1395 KLALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1395 ~~~l~lD~DGTLap---i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
..|+|||.||||.. ...+|++..+-|++.++|++|.++ |..++|||-.
T Consensus 23 ~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~-G~~l~IvTNQ 73 (209)
T d2o2xa1 23 LPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQ 73 (209)
T ss_dssp CCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEEC
T ss_pred CCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhh-CCeEEEeccc
Confidence 35899999999954 567788889999999999999876 5789999953
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=91.89 E-value=0.068 Score=51.41 Aligned_cols=47 Identities=26% Similarity=0.347 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCCCC-CCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPIAP-HPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~-~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
.+++|+||||+.-.. ++..+.|-+.+.+.|..|-+. |..+.+.|+|.
T Consensus 3 ~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~-G~~Iii~TaR~ 50 (124)
T d1xpja_ 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARN 50 (124)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred EEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 378999999987644 467888999999999999776 45899999996
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=91.86 E-value=0.047 Score=55.27 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=28.6
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+-|++.+.|+.|+++ |++++|+||.+...+...+
T Consensus 95 ~l~~~~~~~L~~L~~~-g~~~~i~tn~~~~~~~~~l 129 (224)
T d2hsza1 95 RLYPNVKETLEALKAQ-GYILAVVTNKPTKHVQPIL 129 (224)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred chHHHHHHHHHHHhcc-CCcccccccccHHHHHHHH
Confidence 3557889999999999 9999999998876665554
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=90.80 E-value=0.083 Score=53.90 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=24.2
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+.|++.+.|+.|+++ |+.++|+||-....+...+
T Consensus 76 l~pg~~~~l~~L~~~-g~~~~ivS~~~~~~i~~~l 109 (226)
T d2feaa1 76 IREGFREFVAFINEH-EIPFYVISGGMDFFVYPLL 109 (226)
T ss_dssp BCTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHH
T ss_pred hhHHHHHHHHHHHhc-ccccccCCcchhhhHHHHH
Confidence 556777778888777 7888888876665555554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=89.93 E-value=0.086 Score=52.98 Aligned_cols=28 Identities=14% Similarity=0.109 Sum_probs=22.7
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
.+-|++.++|+.|+++ |++++|+|+++.
T Consensus 82 ~~~pgv~~~L~~L~~~-g~~~~v~Sn~~~ 109 (204)
T d2go7a1 82 VLMPGAREVLAWADES-GIQQFIYTHKGN 109 (204)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred cccchHHhhhhccccc-ccchhhhcccch
Confidence 3457888899999888 899999998764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.75 E-value=0.14 Score=51.84 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=28.0
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+-|++.+.|++|+++ |++++|+|+.+.......+
T Consensus 128 ~~pg~~e~l~~L~~~-g~~l~i~Tn~~~~~~~~~~ 161 (253)
T d1zs9a1 128 FFADVVPAVRKWREA-GMKVYIYSSGSVEAQKLLF 161 (253)
T ss_dssp CCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred cCCCHHHHHHHHhhc-cCceeecCCCcHHHHHHHH
Confidence 457889999999999 9999999998866655444
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=88.93 E-value=0.18 Score=52.48 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=26.4
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+-|++.++|+.|+++ |++++|+||.+...+...+
T Consensus 100 ~~~g~~~~L~~Lk~~-g~~i~i~Tn~~~~~~~~~l 133 (257)
T d1swva_ 100 PINGVKEVIASLRER-GIKIGSTTGYTREMMDIVA 133 (257)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHH
T ss_pred cCCcHHHHHHHHHhc-ccceeecCCCchhhHHHHH
Confidence 456677789999999 9999999998866655444
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.87 E-value=0.11 Score=53.52 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=26.5
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
+.|++.+.|+.|+++ |++++||||=....+...
T Consensus 83 l~pg~~~~i~~lk~~-G~~~~ivS~~~~~~v~~i 115 (217)
T d1nnla_ 83 LTPGIRELVSRLQER-NVQVFLISGGFRSIVEHV 115 (217)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHH
T ss_pred cCHHHHHHHHHHHhC-CCEEEEECCCchHHHHHH
Confidence 558899999999999 999999999654444443
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=88.61 E-value=0.086 Score=54.99 Aligned_cols=64 Identities=17% Similarity=0.273 Sum_probs=45.7
Q ss_pred hHHHHHHHhhcCCCcEEEEEecCCCcCCCCCC---------C--------------------CCccCChhHHHHHHHHhc
Q psy775 24 DFDEYLSKYIGTTNKLALLLDYDGTLAPIAPH---------P--------------------DMAVLPEETKRTLQKLAN 74 (1460)
Q Consensus 24 ~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~---------p--------------------~~a~ip~s~~~aL~~L~~ 74 (1460)
.+.++.+.+-+ .++.+|.||||=|+++-.+. | ..+.+-|++++.++.+++
T Consensus 22 ~~~~i~~~~~g-~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~ 100 (209)
T d2b82a1 22 SVAQIENSLAG-RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR 100 (209)
T ss_dssp CHHHHHHHTTT-CCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred EHHHHHHhcCC-CCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence 34445555333 44679999999999984321 0 112344689999999999
Q ss_pred CCCceEEEEeCCchh
Q psy775 75 LPDVHISIISGRNVH 89 (1460)
Q Consensus 75 ~~g~~v~IvTGR~~~ 89 (1460)
+ |+.|+.+|||+..
T Consensus 101 ~-Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 101 R-GDAIFFVTGRSPT 114 (209)
T ss_dssp H-TCEEEEEECSCCC
T ss_pred c-CCeEEEEeCCchh
Confidence 9 9999999999743
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=86.68 E-value=0.17 Score=50.97 Aligned_cols=34 Identities=9% Similarity=0.231 Sum_probs=24.0
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+-|++.+.|+.|++ +++++|+||.+...+...+
T Consensus 82 ~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l 115 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGM 115 (207)
T ss_dssp EECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHH
T ss_pred ccccchhhhhhhhcc--ccccccccccccccccccc
Confidence 345677888888864 4778888887766665555
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=85.27 E-value=0.29 Score=51.13 Aligned_cols=48 Identities=21% Similarity=0.276 Sum_probs=35.2
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~ 1451 (1460)
+++||.||||..- ...-|++.++|++|.+. +.+++++| +|+..++.+.
T Consensus 4 ~v~fDlDGTL~~~------~~~i~~a~~~i~~l~~~-g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 4 GYLIDLDGTIYLG------KEPIPAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp EEEECCBTTTEET------TEECHHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHH
T ss_pred EEEEcCCCccEeC------CCcCccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHH
Confidence 6899999999531 12236788899988776 67899997 5667776554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.32 E-value=0.37 Score=52.41 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=27.4
Q ss_pred ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 59 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 59 a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..+.+++.+.++.|+++ |++++|+||=--..+...+
T Consensus 134 i~Lr~G~~e~~~~l~~~-~i~~~IvSgG~~~~ie~vl 169 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQH-GIPVFIFSAGIGDVLEEVI 169 (291)
T ss_dssp CCBCBTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHc-CCeEEEEcCChHHHHHHHH
Confidence 56788999999999999 9999999994333344433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=83.97 E-value=0.38 Score=50.20 Aligned_cols=48 Identities=13% Similarity=0.311 Sum_probs=36.2
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~ 1451 (1460)
+++||.||||.. . +.. . |++.+++++|.++ +.++.++| ||+.+++.++
T Consensus 5 ~VifDlDGTL~~---~-~~~-i-~~a~e~i~~l~~~-g~~~~~~TN~~~~~~~~~~~~ 55 (250)
T d2c4na1 5 NVICDIDGVLMH---D-NVA-V-PGAAEFLHGIMDK-GLPLVLLTNYPSQTGQDLANR 55 (250)
T ss_dssp EEEEECBTTTEE---T-TEE-C-TTHHHHHHHHHHT-TCCEEEEESCCSCCHHHHHHH
T ss_pred EEEEECCCeeEE---C-CCc-C-ccHHHHHHHHHHC-CCcEEEEeCCCCCCHHHHHHH
Confidence 689999999963 1 112 2 4678899988776 57899997 7888888776
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=83.17 E-value=0.43 Score=49.84 Aligned_cols=49 Identities=16% Similarity=0.223 Sum_probs=35.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~~ 1452 (1460)
+++||.||||..- ..+-|++.++|++|.+. +.++.++| +|+..++.+.+
T Consensus 9 ~vlFDlDGTL~~~------~~~i~~a~e~l~~l~~~-g~~~~~~TN~~~~~~~~~~~~~ 60 (261)
T d1vjra_ 9 LFILDMDGTFYLD------DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKL 60 (261)
T ss_dssp EEEECCBTTTEET------TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHH
T ss_pred EEEEeCCCeeEEC------CccCchHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHH
Confidence 7999999999642 12235777899988775 56899997 67777766643
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=82.91 E-value=0.83 Score=44.01 Aligned_cols=51 Identities=27% Similarity=0.490 Sum_probs=41.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.||-+||++--..+ .+-++++++|+.|++. |+.+.++||..........
T Consensus 5 ~~~~d~~~~~~~g~~D----~lr~~a~~~I~~L~~~-Gi~v~ilTGD~~~~a~~ia 55 (135)
T d2b8ea1 5 AVIFDKTGTLTKGKPD----TLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAIS 55 (135)
T ss_dssp EEEEECCCCCBCSCCC----CBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHH
T ss_pred EEEECCceEEEEecCC----CCCccHHHHHHHHHHc-CCEEEEEcCcchhhhhHHH
Confidence 6889999999753333 3789999999999999 9999999999877665544
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=82.27 E-value=0.38 Score=48.47 Aligned_cols=55 Identities=16% Similarity=0.309 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCCC--CCC---CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAP--HPD---MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~--~p~---~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+++||+||+|++=.- .++ .......--.+|..|++. |+.++++||+....+....
T Consensus 7 ~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~-gi~~~iis~~~~~~v~~~~ 66 (177)
T d1k1ea_ 7 FVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRI 66 (177)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHH
T ss_pred EEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhhh-cEEEEEecCCchhHHHHHH
Confidence 789999999997210 011 112233445689999998 9999999999876665554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=82.20 E-value=0.43 Score=47.57 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=24.4
Q ss_pred cCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1416 AVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1416 a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
..+-|++.++|+.|.++ ++++||+|+++..
T Consensus 81 ~~~~pgv~~~L~~L~~~-g~~~~v~Sn~~~~ 110 (204)
T d2go7a1 81 VVLMPGAREVLAWADES-GIQQFIYTHKGNN 110 (204)
T ss_dssp CEECTTHHHHHHHHHHT-TCEEEEECSSCTH
T ss_pred CcccchHHhhhhccccc-ccchhhhcccchh
Confidence 45568899999999876 6799999997654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=81.39 E-value=0.44 Score=47.63 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=30.7
Q ss_pred CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCC
Q psy775 1415 MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE 1455 (1460)
Q Consensus 1415 ~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~ 1455 (1460)
...+-|++.+.|+.|.+. ++++|||+.+...+...+.--
T Consensus 80 ~~~~~~g~~~~L~~l~~~--~~~~ivT~~~~~~~~~~l~~~ 118 (207)
T d2hdoa1 80 QIELYPGITSLFEQLPSE--LRLGIVTSQRRNELESGMRSY 118 (207)
T ss_dssp GCEECTTHHHHHHHSCTT--SEEEEECSSCHHHHHHHHTTS
T ss_pred ccccccchhhhhhhhccc--ccccccccccccccccccccc
Confidence 344667899999999754 689999999999888777543
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