Psyllid ID: psy7811


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
MNKLGVTITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHccccccccccccccc
cccccccccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHcccccHHHHHHHHcc
mnklgvtitshrryhrrrlnpnpsviTFEQLCINYANEHLQYYFNQHVFQYEQEEYNkegirwrhiefsdntlclqlvegkpngllcvlddqak
mnklgvtitshrryhrrrlnpnpsvITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLvegkpngllcvlddqak
MNKLGVTITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK
*****************RLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL*****
*NKLGVTITSH********NPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQA*
MNKLGVTITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK
*****VTITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNKLGVTITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query94 2.2.26 [Sep-21-2011]
Q13459 2157 Unconventional myosin-IXb yes N/A 0.712 0.031 0.582 4e-20
Q9QY06 2114 Unconventional myosin-IXb yes N/A 0.712 0.031 0.567 7e-20
Q63358 1980 Unconventional myosin-IXb yes N/A 0.712 0.033 0.567 1e-19
Q9Z1N3 2626 Unconventional myosin-IXa no N/A 0.712 0.025 0.582 1e-19
Q8C170 2542 Unconventional myosin-IXa no N/A 0.712 0.026 0.582 1e-19
B2RTY4 2548 Unconventional myosin-IXa no N/A 0.712 0.026 0.582 2e-19
Q9QZZ4 3511 Unconventional myosin-XV no N/A 0.702 0.018 0.621 4e-19
Q9UKN7 3530 Unconventional myosin-XV no N/A 0.702 0.018 0.621 5e-19
Q9U1M8 2357 Myosin-I heavy chain OS=D yes N/A 0.723 0.028 0.544 1e-17
Q13402 2215 Unconventional myosin-VII no N/A 0.776 0.032 0.520 2e-17
>sp|Q13459|MYO9B_HUMAN Unconventional myosin-IXb OS=Homo sapiens GN=MYO9B PE=1 SV=3 Back     alignment and function desciption
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 51/67 (76%)

Query: 27  TFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLL 86
           +FEQ CINYANE LQYYFNQH+F+ EQEEY  EGI W +I ++DN  C+ L+  KP GL 
Sbjct: 531 SFEQFCINYANEQLQYYFNQHIFKLEQEEYQGEGITWHNIGYTDNVGCIHLISKKPTGLF 590

Query: 87  CVLDDQA 93
            +LD+++
Sbjct: 591 YLLDEES 597




Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.
Homo sapiens (taxid: 9606)
>sp|Q9QY06|MYO9B_MOUSE Unconventional myosin-IXb OS=Mus musculus GN=Myo9b PE=1 SV=2 Back     alignment and function description
>sp|Q63358|MYO9B_RAT Unconventional myosin-IXb OS=Rattus norvegicus GN=Myo9b PE=1 SV=1 Back     alignment and function description
>sp|Q9Z1N3|MYO9A_RAT Unconventional myosin-IXa OS=Rattus norvegicus GN=Myo9a PE=1 SV=1 Back     alignment and function description
>sp|Q8C170|MYO9A_MOUSE Unconventional myosin-IXa OS=Mus musculus GN=Myo9a PE=1 SV=2 Back     alignment and function description
>sp|B2RTY4|MYO9A_HUMAN Unconventional myosin-IXa OS=Homo sapiens GN=MYO9A PE=1 SV=2 Back     alignment and function description
>sp|Q9QZZ4|MYO15_MOUSE Unconventional myosin-XV OS=Mus musculus GN=Myo15a PE=1 SV=2 Back     alignment and function description
>sp|Q9UKN7|MYO15_HUMAN Unconventional myosin-XV OS=Homo sapiens GN=MYO15A PE=1 SV=2 Back     alignment and function description
>sp|Q9U1M8|MYOI_DICDI Myosin-I heavy chain OS=Dictyostelium discoideum GN=myoI PE=1 SV=1 Back     alignment and function description
>sp|Q13402|MYO7A_HUMAN Unconventional myosin-VIIa OS=Homo sapiens GN=MYO7A PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query94
270002356 2021 hypothetical protein TcasGA2_TC001372 [T 0.702 0.032 0.848 4e-28
189234985 1843 PREDICTED: similar to myosin-rhogap prot 0.702 0.035 0.848 4e-28
328701265 1863 PREDICTED: myosin-IXb isoform 3 [Acyrtho 0.702 0.035 0.833 1e-27
328701269 1847 PREDICTED: myosin-IXb isoform 1 [Acyrtho 0.702 0.035 0.833 1e-27
328701263 1931 PREDICTED: myosin-IXb isoform 2 [Acyrtho 0.702 0.034 0.833 1e-27
328701267 1776 PREDICTED: myosin-IXb isoform 4 [Acyrtho 0.702 0.037 0.833 1e-27
357623270 1062 hypothetical protein KGM_18974 [Danaus p 0.702 0.062 0.833 2e-27
242011074 783 myosin IIIB, putative [Pediculus humanus 0.702 0.084 0.833 9e-27
427791915 1463 Putative myosin class i heavy chain, par 0.691 0.044 0.784 8e-26
322797024 2118 hypothetical protein SINV_09798 [Solenop 0.702 0.031 0.787 2e-25
>gi|270002356|gb|EEZ98803.1| hypothetical protein TcasGA2_TC001372 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 62/66 (93%)

Query: 27  TFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLL 86
           +FEQLCINYANEHLQYYFNQHVF+YEQEEY KEGIRW +I+F DNT CLQL+EGKPNGLL
Sbjct: 523 SFEQLCINYANEHLQYYFNQHVFKYEQEEYRKEGIRWNNIDFMDNTGCLQLIEGKPNGLL 582

Query: 87  CVLDDQ 92
           C+LDDQ
Sbjct: 583 CLLDDQ 588




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234985|ref|XP_968193.2| PREDICTED: similar to myosin-rhogap protein, myr [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328701265|ref|XP_003241547.1| PREDICTED: myosin-IXb isoform 3 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328701269|ref|XP_001944223.2| PREDICTED: myosin-IXb isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328701263|ref|XP_003241546.1| PREDICTED: myosin-IXb isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328701267|ref|XP_003241548.1| PREDICTED: myosin-IXb isoform 4 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|357623270|gb|EHJ74495.1| hypothetical protein KGM_18974 [Danaus plexippus] Back     alignment and taxonomy information
>gi|242011074|ref|XP_002426282.1| myosin IIIB, putative [Pediculus humanus corporis] gi|212510345|gb|EEB13544.1| myosin IIIB, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|427791915|gb|JAA61409.1| Putative myosin class i heavy chain, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|322797024|gb|EFZ19338.1| hypothetical protein SINV_09798 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query94
WB|WBGene00002040 1880 hum-7 [Caenorhabditis elegans 0.712 0.035 0.641 1.1e-19
UNIPROTKB|G3MXH1 1104 Bt.27781 "Uncharacterized prot 0.712 0.060 0.582 1.5e-19
UNIPROTKB|E1BNV7 2159 MYO9B "Uncharacterized protein 0.712 0.031 0.582 2.4e-19
UNIPROTKB|F1S9U2548 F1S9U2 "Uncharacterized protei 0.712 0.122 0.582 3e-19
UNIPROTKB|G3MXE8 1951 Bt.27781 "Uncharacterized prot 0.712 0.034 0.582 6.2e-19
UNIPROTKB|H3BRD5 2396 MYO9A "Unconventional myosin-I 0.712 0.027 0.582 9.9e-19
MGI|MGI:107735 2542 Myo9a "myosin IXa" [Mus muscul 0.712 0.026 0.582 1.1e-18
UNIPROTKB|B2RTY4 2548 MYO9A "Unconventional myosin-I 0.712 0.026 0.582 1.1e-18
UNIPROTKB|J9P187 2560 MYO9A "Uncharacterized protein 0.712 0.026 0.582 1.2e-18
RGD|621395 2626 Myo9a "myosin IXA" [Rattus nor 0.712 0.025 0.582 1.2e-18
WB|WBGene00002040 hum-7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 250 (93.1 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 43/67 (64%), Positives = 57/67 (85%)

Query:    27 TFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLL 86
             +FEQLCINYANE LQ YFNQH+FQ+EQEEY KEGI W +IE++DNT C+QL + KP G+L
Sbjct:   555 SFEQLCINYANEKLQSYFNQHIFQFEQEEYLKEGISWTNIEYTDNTECVQLFQSKPYGIL 614

Query:    87 CVLDDQA 93
              ++D+++
Sbjct:   615 RLVDEES 621




GO:0007165 "signal transduction" evidence=IEA
GO:0005622 "intracellular" evidence=IEA
GO:0003774 "motor activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0016459 "myosin complex" evidence=IEA
GO:0060002 "plus-end directed microfilament motor activity" evidence=IDA
GO:0005516 "calmodulin binding" evidence=IPI
GO:0033275 "actin-myosin filament sliding" evidence=IDA
UNIPROTKB|G3MXH1 Bt.27781 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BNV7 MYO9B "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S9U2 F1S9U2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|G3MXE8 Bt.27781 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|H3BRD5 MYO9A "Unconventional myosin-IXa" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:107735 Myo9a "myosin IXa" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|B2RTY4 MYO9A "Unconventional myosin-IXa" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9P187 MYO9A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|621395 Myo9a "myosin IXA" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9U1M8MYOI_DICDINo assigned EC number0.54410.72340.0288yesN/A
P32492MYO4_YEASTNo assigned EC number0.60290.71270.0455yesN/A
Q13459MYO9B_HUMANNo assigned EC number0.58200.71270.0310yesN/A
O74805MYO51_SCHPONo assigned EC number0.57350.71270.0455yesN/A
Q875X3MYO2A_NAUCCNo assigned EC number0.58820.71270.0427yesN/A
Q9V3Z6MYO7A_DROMENo assigned EC number0.52940.72340.0313yesN/A
Q29P71MYO7A_DROPSNo assigned EC number0.52940.72340.0313yesN/A
Q63358MYO9B_RATNo assigned EC number0.56710.71270.0338yesN/A
Q9QY06MYO9B_MOUSENo assigned EC number0.56710.71270.0316yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query94
smart00242 677 smart00242, MYSc, Myosin 3e-33
cd01385 692 cd01385, MYSc_type_IX, Myosin motor domain, type I 6e-33
cd00124 679 cd00124, MYSc, Myosin motor domain 3e-30
pfam00063 679 pfam00063, Myosin_head, Myosin head (motor domain) 2e-28
cd01384 674 cd01384, MYSc_type_XI, Myosin motor domain, plant- 2e-28
cd01381 671 cd01381, MYSc_type_VII, Myosin motor domain, type 9e-28
cd01380 691 cd01380, MYSc_type_V, Myosin motor domain, type V 2e-27
cd01387 677 cd01387, MYSc_type_XV, Myosin motor domain, type X 2e-25
COG5022 1463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 9e-25
cd01383 677 cd01383, MYSc_type_VIII, Myosin motor domain, plan 1e-24
cd01377 693 cd01377, MYSc_type_II, Myosin motor domain, type I 4e-22
cd01379 653 cd01379, MYSc_type_III, Myosin motor domain, type 5e-22
cd01378 674 cd01378, MYSc_type_I, Myosin motor domain, type I 1e-21
cd01382 717 cd01382, MYSc_type_VI, Myosin motor domain, type V 1e-20
PTZ00014 821 PTZ00014, PTZ00014, myosin-A; Provisional 2e-11
cd01386 767 cd01386, MYSc_type_XVIII, Myosin motor domain, typ 1e-05
>gnl|CDD|214580 smart00242, MYSc, Myosin Back     alignment and domain information
 Score =  119 bits (302), Expect = 3e-33
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 27  TFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLL 86
           +FEQLCINYANE LQ +FNQHVF+ EQEEY +EGI W  I+F DN  C+ L+E KP G+L
Sbjct: 386 SFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGIL 445

Query: 87  CVLDDQAK 94
            +LD++ +
Sbjct: 446 SLLDEECR 453


Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin. Length = 677

>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins Back     alignment and domain information
>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain Back     alignment and domain information
>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) Back     alignment and domain information
>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins Back     alignment and domain information
>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins Back     alignment and domain information
>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins Back     alignment and domain information
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins Back     alignment and domain information
>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins Back     alignment and domain information
>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins Back     alignment and domain information
>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins Back     alignment and domain information
>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional Back     alignment and domain information
>gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 94
COG5022 1463 Myosin heavy chain [Cytoskeleton] 99.95
cd01387 677 MYSc_type_XV Myosin motor domain, type XV myosins. 99.95
PTZ00014 821 myosin-A; Provisional 99.95
cd01382 717 MYSc_type_VI Myosin motor domain, type VI myosins. 99.95
cd01383 677 MYSc_type_VIII Myosin motor domain, plant-specific 99.95
cd01384 674 MYSc_type_XI Myosin motor domain, plant-specific t 99.95
cd01381 671 MYSc_type_VII Myosin motor domain, type VII myosin 99.95
cd01378 674 MYSc_type_I Myosin motor domain, type I myosins. M 99.95
cd01379 653 MYSc_type_III Myosin motor domain, type III myosin 99.95
cd01385 692 MYSc_type_IX Myosin motor domain, type IX myosins. 99.94
cd01377 693 MYSc_type_II Myosin motor domain, type II myosins. 99.94
cd01380 691 MYSc_type_V Myosin motor domain, type V myosins. M 99.94
smart00242 677 MYSc Myosin. Large ATPases. ATPase; molecular moto 99.94
cd00124 679 MYSc Myosin motor domain. This catalytic (head) do 99.93
PF00063 689 Myosin_head: Myosin head (motor domain); InterPro: 99.92
KOG0164|consensus 1001 99.91
cd01386 767 MYSc_type_XVIII Myosin motor domain, type XVIII my 99.91
KOG0161|consensus 1930 99.88
KOG0163|consensus 1259 99.88
KOG0162|consensus 1106 99.84
KOG0160|consensus 862 99.84
KOG4229|consensus 1062 99.76
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
Probab=99.95  E-value=2.7e-29  Score=203.88  Aligned_cols=91  Identities=42%  Similarity=0.740  Sum_probs=80.0

Q ss_pred             cceeeccCCC-ccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHHH
Q psy7811           4 LGVTITSHRR-YHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQL   77 (94)
Q Consensus         4 ~~~~i~~~~~-~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ldl   77 (94)
                      ||-.+...++ +..++++     |-|+.||||||||||+||+||++|++|+|+.+|++|.+|||.|.+|+|.||++|+||
T Consensus       416 IN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDL  495 (1463)
T COG5022         416 INKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDL  495 (1463)
T ss_pred             HHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHH
Confidence            4444444444 3445555     999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhc-CCCccccccchhcC
Q psy7811          78 VEG-KPNGLLCVLDDQAK   94 (94)
Q Consensus        78 i~~-~p~Gll~lLDee~~   94 (94)
                      |++ +|.|||++|||||+
T Consensus       496 IE~~~p~GIlslLDEE~~  513 (1463)
T COG5022         496 IEKKNPLGILSLLDEECV  513 (1463)
T ss_pred             HhccCCCchHhhhcHHhc
Confidence            997 47799999999996



>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins Back     alignment and domain information
>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins Back     alignment and domain information
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins Back     alignment and domain information
>cd01378 MYSc_type_I Myosin motor domain, type I myosins Back     alignment and domain information
>cd01379 MYSc_type_III Myosin motor domain, type III myosins Back     alignment and domain information
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins Back     alignment and domain information
>cd01377 MYSc_type_II Myosin motor domain, type II myosins Back     alignment and domain information
>cd01380 MYSc_type_V Myosin motor domain, type V myosins Back     alignment and domain information
>smart00242 MYSc Myosin Back     alignment and domain information
>cd00124 MYSc Myosin motor domain Back     alignment and domain information
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG0164|consensus Back     alignment and domain information
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins Back     alignment and domain information
>KOG0161|consensus Back     alignment and domain information
>KOG0163|consensus Back     alignment and domain information
>KOG0162|consensus Back     alignment and domain information
>KOG0160|consensus Back     alignment and domain information
>KOG4229|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query94
1qvi_A 840 Crystal Structure Of Scallop Myosin S1 In The Pre-P 2e-16
1kk7_A 837 Scallop Myosin In The Near Rigor Conformation Lengt 2e-16
1b7t_A 835 Myosin Digested By Papain Length = 835 2e-16
1dfl_A 831 Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra 2e-16
1dfk_A 830 Nucleotide-Free Scallop Myosin S1-Near Rigor State 2e-16
2os8_A 840 Rigor-Like Structures Of Muscle Myosins Reveal Key 2e-16
2ec6_A 838 Placopecten Striated Muscle Myosin Ii Length = 838 3e-16
1oe9_A 795 Crystal Structure Of Myosin V Motor With Essential 3e-16
2dfs_A 1080 3-D Structure Of Myosin-V Inhibited State Length = 7e-16
1w8j_A 766 Crystal Structure Of Myosin V Motor Domain - Nucleo 7e-16
3i5g_A 839 Crystal Structure Of Rigor-Like Squid Myosin S1 Len 8e-16
2w4g_M 840 Isometrically Contracting Insect Asynchronous Fligh 1e-15
1g8x_A 1010 Structure Of A Genetically Engineered Molecular Mot 1e-15
1mma_A 762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-15
3myh_X 762 Insights Into The Importance Of Hydrogen Bonding In 1e-15
1mmn_A 762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-15
1yv3_A 762 The Structural Basis Of Blebbistatin Inhibition And 2e-15
2jhr_A 788 Crystal Structure Of Myosin-2 Motor Domain In Compl 2e-15
1d0x_A 761 Dictyostelium Myosin S1dc (Motor Domain Fragment) C 2e-15
2y0r_X 758 Structural Basis For The Allosteric Interference Of 2e-15
1mmd_A 762 Truncated Head Of Myosin From Dictyostelium Discoid 2e-15
1fmv_A 761 Crystal Structure Of The Apo Motor Domain Of Dictyo 2e-15
2y9e_X 758 Structural Basis For The Allosteric Interference Of 2e-15
1w9l_A 770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 2e-15
2xel_A 776 Molecular Mechanism Of Pentachloropseudilin Mediate 2e-15
1jwy_A 776 Crystal Structure Of The Dynamin A Gtpase Domain Co 2e-15
4db1_A 783 Cardiac Human Myosin S1dc, Beta Isoform Complexed W 2e-15
2x9h_A 695 Crystal Structure Of Myosin-2 Motor Domain In Compl 2e-15
3mkd_A 692 Crystal Structure Of Myosin-2 Dictyostelium Discoid 2e-15
1w9i_A 770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 2e-15
1w9j_A 770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 2e-15
2aka_A 776 Structure Of The Nucleotide-Free Myosin Ii Motor Do 2e-15
1w9k_A 770 Dictyostelium Discoideum Myosin Ii Motor Domain S45 3e-15
2xo8_A 776 Crystal Structure Of Myosin-2 In Complex With Tribr 3e-15
3mnq_A 788 Crystal Structure Of Myosin-2 Motor Domain In Compl 3e-15
1mmg_A 762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 3e-15
1lvk_A 762 X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N 9e-15
2mys_A 843 Myosin Subfragment-1, Alpha Carbon Coordinates Only 2e-14
1m8q_A 840 Molecular Models Of Averaged Rigor Crossbridges Fro 2e-14
1br1_A 820 Smooth Muscle Myosin Motor Domain-Essential Light C 1e-13
1br2_A 791 Smooth Muscle Myosin Motor Domain Complexed With Mg 1e-13
2ycu_A 995 Crystal Structure Of Human Non Muscle Myosin 2c In 2e-13
3dtp_A 971 Tarantula Heavy Meromyosin Obtained By Flexible Doc 2e-13
3dtp_B 973 Tarantula Heavy Meromyosin Obtained By Flexible Doc 2e-13
3j04_A 909 Em Structure Of The Heavy Meromyosin Subfragment Of 2e-13
1i84_S 1184 Cryo-Em Structure Of The Heavy Meromyosin Subfragme 4e-13
1lkx_A 697 Motor Domain Of Myoe, A Class-I Myosin Length = 697 2e-12
4a7f_C 697 Structure Of The Actin-Tropomyosin-Myosin Complex ( 2e-12
2bki_A 858 Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St 2e-12
2v26_A 784 Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L 2e-12
4e7s_A 798 Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat 2e-12
2x51_A 789 M6 Delta Insert1 Length = 789 2e-12
4dbr_A 786 Myosin Vi D179y (md) Pre-powerstroke State Length = 2e-12
4e7z_A 798 Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F 2e-12
2vas_A 788 Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo 2e-12
3l9i_A 814 Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant 2e-12
4dbq_A 788 Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos 2e-12
2bkh_A 814 Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc 2e-12
4dbp_A 814 Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal 2e-12
4anj_A 1052 Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St 2e-12
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 Back     alignment and structure

Iteration: 1

Score = 80.9 bits (198), Expect = 2e-16, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Query: 27 TFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGKPNGL 85 +FEQLCINY NE LQ +FN H+F EQEEY KEGI W I+F D +C+ L+E KP G+ Sbjct: 471 SFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGI 529 Query: 86 LCVLDDQ 92 L +L+++ Sbjct: 530 LSILEEE 536
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 Back     alignment and structure
>pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 Back     alignment and structure
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 Back     alignment and structure
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 Back     alignment and structure
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 Back     alignment and structure
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 Back     alignment and structure
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 Back     alignment and structure
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 Back     alignment and structure
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 Back     alignment and structure
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 Back     alignment and structure
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 Back     alignment and structure
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 Back     alignment and structure
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 Back     alignment and structure
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 Back     alignment and structure
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 Back     alignment and structure
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 Back     alignment and structure
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 Back     alignment and structure
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 Back     alignment and structure
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 Back     alignment and structure
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 Back     alignment and structure
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 Back     alignment and structure
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 Back     alignment and structure
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 Back     alignment and structure
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 Back     alignment and structure
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 Back     alignment and structure
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 Back     alignment and structure
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 Back     alignment and structure
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 Back     alignment and structure
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 Back     alignment and structure
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 Back     alignment and structure
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 Back     alignment and structure
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 Back     alignment and structure
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 Back     alignment and structure
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 Back     alignment and structure
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 Back     alignment and structure
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 Back     alignment and structure
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 Back     alignment and structure
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 Back     alignment and structure
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 Back     alignment and structure
>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 Back     alignment and structure
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 Back     alignment and structure
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 Back     alignment and structure
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 Back     alignment and structure
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 Back     alignment and structure
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 Back     alignment and structure
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 Back     alignment and structure
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 Back     alignment and structure
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query94
2v26_A 784 Myosin VI; calmodulin-binding, nucleotide-binding, 1e-35
1lkx_A 697 Myosin IE heavy chain; myosin motor domain, lever 7e-35
2dfs_A 1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-33
1w7j_A 795 Myosin VA; motor protein, unconventional myosin, m 2e-33
1w9i_A 770 Myosin II heavy chain; molecular motor, ATPase, mo 1e-31
2ycu_A 995 Non muscle myosin 2C, alpha-actinin; motor protein 2e-31
4db1_A 783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 2e-31
1g8x_A 1010 Myosin II heavy chain fused to alpha-actinin 3; mo 2e-31
1kk8_A 837 Myosin heavy chain, striated muscle; actin-detache 4e-31
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 3e-30
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 Back     alignment and structure
 Score =  126 bits (318), Expect = 1e-35
 Identities = 29/67 (43%), Positives = 44/67 (65%)

Query: 28  FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 87
           FEQ CINY NE LQ +FN+ + + EQE Y KEG+    + + DN  C+ L+E +  G+L 
Sbjct: 464 FEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILD 523

Query: 88  VLDDQAK 94
           +LD++ +
Sbjct: 524 ILDEENR 530


>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query94
2v26_A 784 Myosin VI; calmodulin-binding, nucleotide-binding, 99.96
4anj_A 1052 Unconventional myosin-VI, green fluorescent prote; 99.96
1lkx_A 697 Myosin IE heavy chain; myosin motor domain, lever 99.95
1w7j_A 795 Myosin VA; motor protein, unconventional myosin, m 99.95
1w9i_A 770 Myosin II heavy chain; molecular motor, ATPase, mo 99.95
4db1_A 783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 99.95
1kk8_A 837 Myosin heavy chain, striated muscle; actin-detache 99.94
2ycu_A 995 Non muscle myosin 2C, alpha-actinin; motor protein 99.94
2dfs_A 1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 99.94
1g8x_A 1010 Myosin II heavy chain fused to alpha-actinin 3; mo 99.94
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 99.93
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Back     alignment and structure
Probab=99.96  E-value=2.6e-30  Score=203.52  Aligned_cols=92  Identities=32%  Similarity=0.555  Sum_probs=81.1

Q ss_pred             ccceeeccCCCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHHH
Q psy7811           3 KLGVTITSHRRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQL   77 (94)
Q Consensus         3 ~~~~~i~~~~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ldl   77 (94)
                      +||-.|........++|+     |+|+.|+|||||||||||+||++|++++|..+|++|.+|||.|.+++|.||++|+||
T Consensus       434 ~IN~~l~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idL  513 (784)
T 2v26_A          434 RVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL  513 (784)
T ss_dssp             HHHTTSCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHH
T ss_pred             HHHHhcCcccccceeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHH
Confidence            345445433333445555     999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCccccccchhcC
Q psy7811          78 VEGKPNGLLCVLDDQAK   94 (94)
Q Consensus        78 i~~~p~Gll~lLDee~~   94 (94)
                      |+++|+|||++|||||+
T Consensus       514 ie~kp~GIlslLDEe~~  530 (784)
T 2v26_A          514 IEARLVGILDILDEENR  530 (784)
T ss_dssp             HHCTTTSHHHHHHHHHH
T ss_pred             HhhccccHHHHHHHHhc
Confidence            99999999999999994



>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa} Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 94
d1lkxa_ 684 c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli 8e-17
d2mysa2 794 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain 2e-15
d1br2a2 710 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick 2e-15
d1kk8a2 789 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain 3e-15
d1w7ja2 730 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick 4e-15
d1d0xa2 712 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain 9e-14
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]
 Score = 71.3 bits (174), Expect = 8e-17
 Identities = 31/72 (43%), Positives = 45/72 (62%)

Query: 21  PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG 80
                 +FEQL IN+ NE LQ  F +   + EQEEY +EGI W++IE+ +N    +L+E 
Sbjct: 383 EVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEK 442

Query: 81  KPNGLLCVLDDQ 92
           KP GL+ +LD+ 
Sbjct: 443 KPIGLISLLDEA 454


>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query94
d1d0xa2 712 Myosin S1, motor domain {Dictyostelium discoideum 99.92
d1lkxa_ 684 Myosin S1, motor domain {Dictyostelium discoideum, 99.91
d1br2a2 710 Myosin S1, motor domain {Chicken (Gallus gallus), 99.91
d1w7ja2 730 Myosin S1, motor domain {Chicken (Gallus gallus), 99.91
d2mysa2 794 Myosin S1, motor domain {Chicken (Gallus gallus), 99.9
d1kk8a2 789 Myosin S1, motor domain {Bay scallop (Aequipecten 99.9
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.92  E-value=1.9e-26  Score=178.36  Aligned_cols=92  Identities=42%  Similarity=0.738  Sum_probs=74.0

Q ss_pred             ccceeeccCCCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHHHH
Q psy7811           3 KLGVTITSHRRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQ   76 (94)
Q Consensus         3 ~~~~~i~~~~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~ld   76 (94)
                      +||..|.+......++|+     |+|+.|+|||||||||||+||++|++++|..++++|.+|||.|..++| .||++|++
T Consensus       389 ~IN~~l~~~~~~~~IgiLDifGFE~f~~NsfEQLcINyaNEkLQ~~f~~~~f~~eq~eY~~EgI~~~~i~~~~dn~~~~~  468 (712)
T d1d0xa2         389 KINNVLCQERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID  468 (712)
T ss_dssp             HHHHHHCCSCCSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--------CHHHHHH
T ss_pred             HHhhhcccCcccceeeeeecccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccCCCcHHHHH
Confidence            455555554444445555     999999999999999999999999999999999999999999999999 59999999


Q ss_pred             HHhc-CCCccccccchhcC
Q psy7811          77 LVEG-KPNGLLCVLDDQAK   94 (94)
Q Consensus        77 li~~-~p~Gll~lLDee~~   94 (94)
                      ||++ +|.|||++|||||+
T Consensus       469 Li~~k~p~Gll~lLdee~~  487 (712)
T d1d0xa2         469 LIDGRQPPGILALLDEQSV  487 (712)
T ss_dssp             HHHCTTTTCHHHHHHHHHT
T ss_pred             HHhccCCCcHHHHhHHHhc
Confidence            9985 58999999999995



>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure