Psyllid ID: psy7828

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500---
Protein Sequence
MGHIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIVL
Secondary Structure (PSIPRED)
cccccccHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccHHccccccccHHHHHHHHHHcccccccccccccccEEEEEcccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccEHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHEEEEEccccccEcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHccccccEEcc
Coil and Loop (DISEMBL)
mghivycpllfshhsmtLFQRLvvspcikesdfkSTLLESIKNVGIETQIRNTVFHWMRShkidldsnswaepLTYLRKAQFQWEKRIQKSLNSMCNEIGIQlsrfrlpsdrddmkDKWTELSTYEvdltqyrpvyapkDFLEVLISLKssnyrsvegegswdftqiplKIKSLSELRQLYKELARgesvigtnsynnpnpyfnaLESERITLGEkvlnskhapVAQEFlkkgsprclrgkiwcqvlgseatpdnskYFEQLKSSVLTYDLLIDkltikdvqltasnddqyFVFEDLLYQILLCFSRDTEILSIfehssasplygplknkntntenlvvyppsgiipfhgftmyatpfcylyDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRyepqlflhfktihihpIKIVFKWIMRcfsghlppdqILYLWDLILAYDSLEIISILAVAILSFRRenlmqvdtlqNVEVGYEILygryipaprwivl
Flexible Loop (DISEMBL)
MGHIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIqlsrfrlpsdrDDMKDKWTElstyevdltqyrpvyAPKDFLEVLISLKSSNYRSvegegswdftqipLKIKSLSELRQLYKELARgesvigtnsynnpnPYFNALESERITLGEKVLNSKHAPVAQeflkkgsprclRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILygryipaprwivl
Low Complexity Region (SEG)
MGHIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIVL
Disordered region (IsUnstruct)
**HIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLP*****MKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIV*
Disordered Region (DISOPRED)
*****YC*LLFSHHSMTLFQRLVVS******DFKSTLLESIKNVGIETQIRNTVFH******************TYLRKAQFQWEKRIQKSLNSMCN********************************TQYRPVYAPKDFLEVLISL*****************************************************YFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILS******************TNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIVL
Disordered Region (DISEMBL)
MGHIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIVL
Disordered Region (DISPRO)
**HIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIVL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGHIVYCPLLFSHHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPRWIVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	503	2.2.26 [Sep-21-2011]
Q8N5T2	526	TBC1 domain family member	yes	N/A	0.906	0.866	0.460	1e-112
Q55G97	1033	TBC domain-containing pro	yes	N/A	0.240	0.117	0.272	5e-05
Q10496	1031	GTPase activating protein	yes	N/A	0.208	0.101	0.288	9e-05
Q5ZJ17	816	Rab GTPase-activating pro	no	N/A	0.413	0.254	0.210	0.0004
Q54TA5	1016	TBC1 domain family member	no	N/A	0.192	0.095	0.262	0.0004
A6H6A9	815	Rab GTPase-activating pro	no	N/A	0.411	0.253	0.217	0.0004

>sp|Q8N5T2|TBC19_HUMAN TBC1 domain family member 19 OS=Homo sapiens GN=TBC1D19 PE=2 SV=2

 Score =  406 bits (1043), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/469 (46%), Positives = 302/469 (64%), Gaps = 13/469 (2%)

Query: 26  PCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWA------EPLTYLRK 79
           P IK    K  + E  K  G E +++N V+  +      L S+  A      EPL Y+RK
Sbjct: 39  PEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSV--FPLPSHPAAPPEHLKEPLVYMRK 96

Query: 80  AQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPK 139
           AQ  WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYAPK
Sbjct: 97  AQGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPK 156

Query: 140 DFLEVLISLKSSNYR---SVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSY 196
           DFLEVLI+L++ NY    S+         Q+PLK+K + EL++ + EL      +G +  
Sbjct: 157 DFLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDS 216

Query: 197 NNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNS 256
               P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P++ 
Sbjct: 217 TQVPP--ELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPEDV 274

Query: 257 KYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFE 316
            Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +LS F 
Sbjct: 275 LYYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFA 334

Query: 317 HSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFY 376
            +SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR  Y
Sbjct: 335 FNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMY 394

Query: 377 LRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSG 436
           +R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R FSG
Sbjct: 395 VRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSG 454

Query: 437 HLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           +L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E 
Sbjct: 455 YLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAEA 503

May act as a GTPase-activating protein for Rab family protein(s).
Homo sapiens (taxid: 9606)

>sp|Q55G97|TBCK_DICDI TBC domain-containing protein kinase-like protein OS=Dictyostelium discoideum GN=tbck PE=3 SV=1

 Score = 50.1 bits (118), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 348 FHGFTMYATPFC--YLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQ 405
           + G    A+PF   + +++ I+ + + +AF  +Y   L+ V +N   +  + +++ +LL 
Sbjct: 738 WQGLDNVASPFLVHHFFNEPIA-FASLKAFVDKYLSILY-VPNNHAALSEIMLIYQQLLA 795

Query: 406 RYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVA 465
            ++P+L  H   I + P      W +  F+  LP D++  LWD IL   S     I A  
Sbjct: 796 YHDPELLNHLMDIQLDPNLYSIPWFITVFAHILPIDKLEILWDSILLCPSSLPNFIAASM 855

Query: 466 ILSFR 470
           I+ FR
Sbjct: 856 IIQFR 860

Dictyostelium discoideum (taxid: 44689)

>sp|Q10496|GYP51_SCHPO GTPase activating protein Gyp51 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gyp51 PE=3 SV=1

 Score = 48.9 bits (115), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 373 RAFYLRYF----YHLHQVSSNE-QGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVF 427
           +AF L  F    YHL  + S+E +G+  +   F RL++ Y P L +HFK   I       
Sbjct: 720 QAFALLVFLFKNYHLQNIFSSEMRGLSRVLHQFTRLVEDYMPSLAIHFKRQDIKTCSYAS 779

Query: 428 KWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVD 478
           +W +  F+   P + + +L+D++  Y    I+    +A+LS  +E+L++++
Sbjct: 780 EWFLTLFAYKFPLEVVAHLYDILFLY-GPGILFNFGLALLSHSQESLLKLN 829

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5ZJ17|RBG1L_CHICK Rab GTPase-activating protein 1-like OS=Gallus gallus GN=RABGAP1L PE=2 SV=1

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 104/256 (40%), Gaps = 48/256 (18%)

Query: 229 FLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASND 288
            +K+G P  LR ++W  + G     DN    ++ +  ++T D   + +  +D+  T    
Sbjct: 535 LVKRGVPEALRAEVWQLLAGCH---DNEAMLDKYRI-LITMDSAQENVITRDIHRTFPAH 590

Query: 289 DQYFVFE----DLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSG 344
           D +   E    + LY+I   +S   E +            G  + ++     L+++ P  
Sbjct: 591 DYFKDTEGDGQESLYKICKAYSVYDEDI------------GYCQGQSFLAAVLLLHMPEE 638

Query: 345 IIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFH--R 402
                 F ++      +YD      +  R  Y   F  LH            C  F   +
Sbjct: 639 ----QAFCVFVK---IMYD------YGLRDLYRNNFEDLH------------CKFFQLEK 673

Query: 403 LLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISIL 462
           L+Q   P L+ HF  +++       +W +  F+   P   + ++ DL+L  + + II  +
Sbjct: 674 LMQEQLPDLYSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLC-EGMNIIFHV 732

Query: 463 AVAILSFRRENLMQVD 478
           A+A+L   +E+L+Q D
Sbjct: 733 ALALLKTSKEDLLQAD 748

Gallus gallus (taxid: 9031)

>sp|Q54TA5|TBC5B_DICDI TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum GN=tbc1d5B PE=3 SV=1

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 384 HQVSSNEQGILSLCILFHR-LLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQ 442
            ++SS    ++  C   H  LL++ + +L+ H  ++ I P   + +WI   F      D 
Sbjct: 565 EELSSKCNDVVLKCKYIHSILLKQKDFELYQHLDSLDIEPQIYLLRWIRLLFGREFHFDD 624

Query: 443 ILYLWDLILAY-DSLEIISILAVAILSFRRENLMQVDTL 480
           +L +WD + AY ++L +I    +++L++ RE+L++ D++
Sbjct: 625 VLNIWDALFAYGENLILIDYFCISMLTYIREHLLKSDSI 663

May act as a GTPase-activating protein for Rab family protein(s).

Dictyostelium discoideum (taxid: 44689)

>sp|A6H6A9|RBG1L_MOUSE Rab GTPase-activating protein 1-like OS=Mus musculus GN=Rabgap1l PE=1 SV=1

 Score = 46.6 bits (109), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 50/257 (19%)

Query: 229 FLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASND 288
            +K G P  LR ++W  + G     DN +  ++ +  ++T D   + +  +D+  T    
Sbjct: 534 LVKSGVPEALRAEVWQLLAGCH---DNQEMLDKYRI-LITKDSAQESVITRDIHRTFPAH 589

Query: 289 DQYFV-----FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPS 343
           D YF       ++ LY+I   +S       +F+        G  + ++     L+++ P 
Sbjct: 590 D-YFKDTGGDGQESLYKICKAYS-------VFDED-----IGYCQGQSFLAAVLLLHMPE 636

Query: 344 GIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFH-- 401
                         FC L    I   +  R  Y   F  LH            C  +   
Sbjct: 637 -----------EQAFCVLV--TIMYGYKLRDLYRNNFEDLH------------CKFYQLE 671

Query: 402 RLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISI 461
           +L+Q   P L+ HF  +++       +W +  F+   P   + ++ DL+L  + L II  
Sbjct: 672 KLMQEQLPDLYSHFCDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLC-EGLNIIFH 730

Query: 462 LAVAILSFRRENLMQVD 478
           +A+A+L   +E+L+Q D
Sbjct: 731 VALALLKTSKEDLLQAD 747

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	503
345480759	601	PREDICTED: TBC1 domain family member 19-	0.926	0.775	0.584	1e-168
307177060	528	TBC1 domain family member 19 [Camponotus	0.924	0.880	0.583	1e-165
383856342	529	PREDICTED: TBC1 domain family member 19-	0.926	0.880	0.581	1e-165
380030719	536	PREDICTED: TBC1 domain family member 19-	0.932	0.875	0.581	1e-165
340717591	530	PREDICTED: TBC1 domain family member 19-	0.926	0.879	0.580	1e-165
242024697	486	conserved hypothetical protein [Pediculu	0.866	0.897	0.600	1e-165
350407670	530	PREDICTED: TBC1 domain family member 19-	0.926	0.879	0.578	1e-165
332031448	524	TBC1 domain family member 19 [Acromyrmex	0.924	0.887	0.591	1e-164
110765123	536	PREDICTED: TBC1 domain family member 19-	0.932	0.875	0.578	1e-164
307204884	528	TBC1 domain family member 19 [Harpegnath	0.924	0.880	0.575	1e-161

>gi|345480759|ref|XP_001605444.2| PREDICTED: TBC1 domain family member 19-like [Nasonia vitripennis]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/472 (58%), Positives = 369/472 (78%), Gaps = 6/472 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDL---DSNSWAEPLTY 76
           QRLV S  +K+ DFK+TL E++KN G+ET++RNTVFHW RS ++     + N +   L+Y
Sbjct: 109 QRLVASSAVKKEDFKNTLFEALKNEGLETELRNTVFHWSRSQRLSESKENVNEYQTDLSY 168

Query: 77  LRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVY 136
           L+KAQ QWE+RIQKSLNSMCNE+ + L+R R  +DR+++ +KW ELST + D++QYRP+Y
Sbjct: 169 LKKAQIQWERRIQKSLNSMCNELNVPLARIRPNADREELSEKWNELSTCDFDISQYRPLY 228

Query: 137 APKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSY 196
           APKDFLEVL S++   ++    E +W+F+ I +++K+L++LR+ YKEL++G +++G N  
Sbjct: 229 APKDFLEVLFSVRDPAFKKQPNEPNWEFSHIQIRVKTLAQLRETYKELSQGVALLGVNGN 288

Query: 197 NNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNS 256
                 +  LE+ER  LGEKVL S HAP+AQEFLK+G+PR LRGK+W  VLGS     + 
Sbjct: 289 IPSAGNYPNLEAERTHLGEKVLISNHAPIAQEFLKRGAPRALRGKLWSLVLGSIIRESDV 348

Query: 257 KYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILS--- 313
           +Y+E+LK  VL YD+++DKL IKDVQLTASNDDQYFVFED+LY+ +L FSRD+E+L+   
Sbjct: 349 EYYEELKGMVLQYDIMVDKLIIKDVQLTASNDDQYFVFEDVLYKTMLSFSRDSEVLAPVT 408

Query: 314 IFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFR 373
           + + +    ++  L+ K+   EN +V+PPSG+IPFHGFTMYATPFCYLYDD  ++YFTFR
Sbjct: 409 MDKSAGGQVIHAVLQGKSATLENTLVFPPSGVIPFHGFTMYATPFCYLYDDPCAMYFTFR 468

Query: 374 AFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRC 433
           AFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EPQL+ HF+ +HI PIKIVFKW+MR 
Sbjct: 469 AFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPQLWAHFRNLHIQPIKIVFKWLMRG 528

Query: 434 FSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           FSGHLPP+Q+LYLWDL+L YDSLEII +LAV ILSFR+ENLMQV TL NVE 
Sbjct: 529 FSGHLPPEQLLYLWDLVLGYDSLEIIPLLAVTILSFRKENLMQVKTLHNVEA 580

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177060|gb|EFN66328.1| TBC1 domain family member 19 [Camponotus floridanus]

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 276/473 (58%), Positives = 369/473 (78%), Gaps = 8/473 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAE----PLT 75
           QR+V SP + + DFK++L+ ++KN G+ET+IRNTVFHW RS +  L S S +      L+
Sbjct: 36  QRIVASPIVDKDDFKNSLITALKNNGLETEIRNTVFHWARS-RGSLHSRSVSHIQVTDLS 94

Query: 76  YLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPV 135
           YL+K Q QWE+RIQKSLNS C+E+ I L+R RL +DRD++ +KW ELSTY++DL+QYRP+
Sbjct: 95  YLKKTQIQWERRIQKSLNSTCSELNIPLARIRLTTDRDELAEKWNELSTYDIDLSQYRPL 154

Query: 136 YAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNS 195
           YAPKDFL+VL S++  +++    E +WDF+ I + +K+L++LR++Y  LA+G  ++G N 
Sbjct: 155 YAPKDFLDVLFSIRDPSFKKQLDELNWDFSHIQINVKTLAQLRRMYSGLAQGMPLLGINP 214

Query: 196 YNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN 255
                  F  LE+ER  +GEKVLNS HAP+AQEFLK+GSPR LRG++W  VLGS    ++
Sbjct: 215 DMPATENFPNLEAERTHIGEKVLNSNHAPIAQEFLKRGSPRALRGRLWSLVLGSVIKDND 274

Query: 256 SKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIF 315
            +Y+E+LK+ VL YD+++DKL I DVQLTA NDDQYFVFED+LY+ +LCFSRD+EIL+  
Sbjct: 275 IEYYEELKNMVLQYDIVVDKLIIMDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEILAPV 334

Query: 316 ---EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTF 372
                +    ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYD+  ++Y+TF
Sbjct: 335 TTDRSAGGQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDNPCAMYYTF 394

Query: 373 RAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMR 432
           RAFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EPQL++HFK +HI PI+IVFKW+MR
Sbjct: 395 RAFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPQLWIHFKNLHIQPIRIVFKWLMR 454

Query: 433 CFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
            FSGHLPP+Q+LYLWDLIL YDSLEII +LAV ILSFR+ENL+QV+T QNVE 
Sbjct: 455 GFSGHLPPEQLLYLWDLILGYDSLEIIPLLAVTILSFRKENLLQVNTQQNVEA 507

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856342|ref|XP_003703668.1| PREDICTED: TBC1 domain family member 19-like [Megachile rotundata]

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 274/471 (58%), Positives = 367/471 (77%), Gaps = 5/471 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEP--LTYL 77
           Q+LV S  +K  DFK+TL++++KN  +ET+IRNTVFHW RS    + S    E   L+YL
Sbjct: 38  QKLVASTAVKREDFKNTLIDALKNNSLETEIRNTVFHWARSQGSLITSVPSTEEVDLSYL 97

Query: 78  RKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYA 137
           +KAQ QWE+RIQKSLNS CNE+ + L+R R   DRD+  +KW ELSTY++DL+QYRP+YA
Sbjct: 98  KKAQIQWERRIQKSLNSTCNELNVPLARIRPSIDRDEFTEKWNELSTYDIDLSQYRPLYA 157

Query: 138 PKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYN 197
           PKDFL+VL+++++ +++    E +W+F+ I +++K+L++LR+LY ELA G  ++G N   
Sbjct: 158 PKDFLDVLLAIRNPSFKKQPDELNWEFSHIQIRVKTLTQLRRLYVELASGMPLLGVNPDM 217

Query: 198 NPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSK 257
             +  F  LE ERI LGEKVL + HAP+AQEFLK+G+PR LRG++W  VLG+    ++ +
Sbjct: 218 PSSENFANLEEERIHLGEKVLKTNHAPIAQEFLKRGAPRGLRGRLWSLVLGTVVKENDVE 277

Query: 258 YFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIF-- 315
           Y+E+LK+ VL YD++IDKL IKDVQLTA NDDQYFVFED+LY+ +LCFSRD+E+L+    
Sbjct: 278 YYEELKNMVLQYDIVIDKLIIKDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEVLAPVTT 337

Query: 316 -EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA 374
            + +    ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYDD  + Y+TFRA
Sbjct: 338 DKSAGGQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDDSCATYYTFRA 397

Query: 375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCF 434
           FYLRY++ LH VSS+EQGI++LC+LF RLLQ +EPQL+ HF+ IHI P+K+VFKWIMR F
Sbjct: 398 FYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPQLWFHFRNIHIQPVKVVFKWIMRGF 457

Query: 435 SGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           SGHLPP+Q+LYLWDLIL YDSLEIIS+LAV ILSFR+ENL+QV+  Q+VE 
Sbjct: 458 SGHLPPEQLLYLWDLILGYDSLEIISLLAVTILSFRKENLLQVNNQQSVEA 508

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030719|ref|XP_003698990.1| PREDICTED: TBC1 domain family member 19-like [Apis florea]

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 276/475 (58%), Positives = 368/475 (77%), Gaps = 6/475 (1%)

Query: 17  TLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSH---KIDLDSNSWAEP 73
           T  Q+LV S  +K  DFK+TLL+++K+ G+ET+IRNTVFHW+RS        +S +    
Sbjct: 41  TEIQKLVASTAVKREDFKNTLLDALKSNGLETEIRNTVFHWVRSQGSLSTASESTTNEVD 100

Query: 74  LTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYR 133
           LTYL+KAQ QWE+RIQKSLNS CNE+ + L+R R  +DR+++ +KW ELSTY++DL+QYR
Sbjct: 101 LTYLKKAQIQWERRIQKSLNSTCNELNVPLARIRPNADREELAEKWNELSTYDIDLSQYR 160

Query: 134 PVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGT 193
           P+YAPKDFL+VL S+++  ++    E +W+F+ I +++K+L +LR LY ELA+G  ++G 
Sbjct: 161 PLYAPKDFLDVLFSIRNPFFKKQPDELNWEFSHIEIRVKTLMQLRCLYVELAKGMPLLGV 220

Query: 194 NSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATP 253
           N     +  F  LE ERI +GEK+L S HAP+AQEFLK+G+PR LRG++W  VLGS    
Sbjct: 221 NPDMPSSENFANLEEERIYIGEKILKSNHAPIAQEFLKRGAPRALRGRLWSLVLGSAVKQ 280

Query: 254 DNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILS 313
           ++S+Y+E+LK+ VL YD++IDKL IKDVQLTA NDDQYFVFED+LY+ +LCFSRD+E+L+
Sbjct: 281 NDSEYYEELKNMVLQYDIVIDKLIIKDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEVLA 340

Query: 314 IF---EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYF 370
                  +    ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYDD  ++Y+
Sbjct: 341 PVTTDRSAGGQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDDPCAMYY 400

Query: 371 TFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWI 430
           TFRAFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EP L++HF+ IHI PI+IVFKWI
Sbjct: 401 TFRAFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPLLWIHFRNIHIQPIRIVFKWI 460

Query: 431 MRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           MR FSGHLPP+Q+L LWDLIL YDSLEII +LAV ILSFR+ENLMQV+  Q+VE 
Sbjct: 461 MRGFSGHLPPEQLLCLWDLILGYDSLEIIPLLAVTILSFRKENLMQVNNQQSVEA 515

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717591|ref|XP_003397264.1| PREDICTED: TBC1 domain family member 19-like [Bombus terrestris]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 274/472 (58%), Positives = 367/472 (77%), Gaps = 6/472 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSH---KIDLDSNSWAEPLTY 76
           Q+LV S  +K  DFK+TLLE++K+ G+ET+IRNTVFHW+RS        + +     LTY
Sbjct: 38  QKLVASTAVKREDFKNTLLEALKSNGLETEIRNTVFHWVRSQGSLSTATEISMEEVDLTY 97

Query: 77  LRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVY 136
           L+KAQ QWE+RIQKSLNS CNE+ + L+R R  +DR++  +KW ELSTY++DL+QYRP+Y
Sbjct: 98  LKKAQIQWERRIQKSLNSTCNELNVPLARIRPNADREEFAEKWNELSTYDIDLSQYRPLY 157

Query: 137 APKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSY 196
           APKDFL+VL S+++  ++    E +W+F+ I +++K+L++LR++Y ELA+G S++G N  
Sbjct: 158 APKDFLDVLFSIRNPAFKKHSDELNWEFSHIQIRVKTLTQLRRVYLELAKGMSLLGVNPD 217

Query: 197 NNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNS 256
              +  F  LE ERI +GEKVL S HAP+AQ+FLK+G+PR LRG +W  VLGS    ++ 
Sbjct: 218 MPSSENFGNLEEERIFIGEKVLKSNHAPIAQQFLKRGAPRALRGSLWSLVLGSTVKQNDI 277

Query: 257 KYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIF- 315
           +Y+E+LK+ VL YD++IDKL IKDVQLTA NDDQYFVFED+LY+ +LCFSRD+E+L+   
Sbjct: 278 EYYEELKNMVLQYDIVIDKLIIKDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEVLAPVT 337

Query: 316 --EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFR 373
               +    ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYDD  ++Y+TFR
Sbjct: 338 TDRSAGGQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDDPCAMYYTFR 397

Query: 374 AFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRC 433
           AFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EP L++HF+ IHI P++IVFKWIMR 
Sbjct: 398 AFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPLLWIHFRNIHIQPVRIVFKWIMRG 457

Query: 434 FSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           FSGHLPP+Q+L LWDLILAYDSLEII +LAV ILSFR+ENLMQV+  Q+VE 
Sbjct: 458 FSGHLPPEQLLCLWDLILAYDSLEIIPLLAVTILSFRKENLMQVNNQQSVEA 509

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242024697|ref|XP_002432763.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518248|gb|EEB20025.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/473 (60%), Positives = 364/473 (76%), Gaps = 37/473 (7%)

Query: 13  HHSMTLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAE 72
           H+  T  Q+LV S  +K+ DF+++L++++++ G+ T++RN++FHW+R+H   L +    E
Sbjct: 27  HNFYTDLQKLVSSSSVKKGDFRNSLMDALRHSGMGTELRNSIFHWIRAHSNHLHNQHAKE 86

Query: 73  PLTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQY 132
           PL YLRKAQ QWEKRI KSLNSM N++G+ LSRFRL SDRD++++KWTELSTY+VDL+QY
Sbjct: 87  PLAYLRKAQMQWEKRIHKSLNSMSNDLGVPLSRFRLASDRDEIQEKWTELSTYDVDLSQY 146

Query: 133 RPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIG 192
           RPVYAPKDFL+VL+S++S NY  +   G+WDFTQIPLK+K+LS+LR LY EL+RGE  +G
Sbjct: 147 RPVYAPKDFLDVLMSIRSPNYNLIRTGGNWDFTQIPLKVKTLSDLRVLYNELSRGEPFLG 206

Query: 193 TNSYNNPNPYFNALESERIT-LGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEA 251
                        LE   I  +  KVL+SKHAP AQEFLKKG P+ +RG+IW QVLGSE 
Sbjct: 207 -------------LEPTLIMKIIFKVLSSKHAPTAQEFLKKGCPKSIRGRIWSQVLGSEP 253

Query: 252 TPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEI 311
              +++YF +LKS VL YDL+IDKL IKDVQLTASNDDQYFVFED+LYQ++LCFSRD ++
Sbjct: 254 KAQHTEYFSELKSLVLQYDLMIDKLVIKDVQLTASNDDQYFVFEDVLYQVMLCFSRDADV 313

Query: 312 LSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFT 371
           LS+  HSS S             EN V YPPSG+IPFHGFTMY           ++LY T
Sbjct: 314 LSVVPHSSIS------------IENTVAYPPSGVIPFHGFTMY-----------VNLYHT 350

Query: 372 FRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIM 431
           FRAFYLRY++ LH+VSS+EQ IL LC+LF RLLQ+ EPQL+LH K I++ PI+IVFKWIM
Sbjct: 351 FRAFYLRYWFRLHEVSSHEQSILPLCLLFERLLQKQEPQLWLHLKLINVQPIRIVFKWIM 410

Query: 432 RCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
           R FSGHLPP+Q+LYLWDLILAYDSLE++ +LAVAI+SFR+ NL++VDTL N+E
Sbjct: 411 RAFSGHLPPEQLLYLWDLILAYDSLEVLPLLAVAIISFRKNNLLKVDTLHNIE 463

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407670|ref|XP_003488155.1| PREDICTED: TBC1 domain family member 19-like [Bombus impatiens]

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 273/472 (57%), Positives = 367/472 (77%), Gaps = 6/472 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSH---KIDLDSNSWAEPLTY 76
           Q+LV S  +K  DFK+TLLE++K+ G+ET+IRNTVFHW+RS        + +     LTY
Sbjct: 38  QKLVASTAVKREDFKNTLLEALKSNGLETEIRNTVFHWVRSQGSLSTATEISMEEVDLTY 97

Query: 77  LRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVY 136
           L+KAQ QWE+RIQKSLNS CNE+ + L+R R  +DR++  +KW ELSTY++DL+QYRP+Y
Sbjct: 98  LKKAQIQWERRIQKSLNSTCNELNVPLARIRPNADREEFAEKWNELSTYDIDLSQYRPLY 157

Query: 137 APKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSY 196
           APKDFL+VL S+++  ++    E +W+F+ I +++K+L++LR++Y ELA+G S++G N  
Sbjct: 158 APKDFLDVLFSIRNPAFKKHSDELNWEFSHIQIRVKTLTQLRRVYLELAKGMSLLGVNPD 217

Query: 197 NNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNS 256
              +  F  LE ERI +GEKVL + HAP+AQ+FLK+G+PR LRG +W  VLGS    ++ 
Sbjct: 218 MPSSENFGNLEEERIFIGEKVLKTNHAPIAQQFLKRGAPRALRGSLWSLVLGSTVKQNDI 277

Query: 257 KYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIF- 315
           +Y+E+LK+ VL YD++IDKL IKDVQLTA NDDQYFVFED+LY+ +LCFSRD+E+L+   
Sbjct: 278 EYYEELKNMVLQYDIVIDKLIIKDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEVLAPVT 337

Query: 316 --EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFR 373
               +    ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYDD  ++Y+TFR
Sbjct: 338 TDRSAGGQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDDPCAMYYTFR 397

Query: 374 AFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRC 433
           AFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EP L++HF+ IHI P++IVFKWIMR 
Sbjct: 398 AFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPLLWIHFRNIHIQPVRIVFKWIMRG 457

Query: 434 FSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           FSGHLPP+Q+L LWDLILAYDSLEII +LAV ILSFR+ENLMQV+  Q+VE 
Sbjct: 458 FSGHLPPEQLLCLWDLILAYDSLEIIPLLAVTILSFRKENLMQVNNQQSVEA 509

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031448|gb|EGI70942.1| TBC1 domain family member 19 [Acromyrmex echinatior]

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/473 (59%), Positives = 369/473 (78%), Gaps = 8/473 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAE----PLT 75
           QRLV S  + + DFK++L+ ++K+ G+ET+IRNTVFHW RS +  L S S +      L+
Sbjct: 32  QRLVASSVVNKDDFKNSLIAALKDNGLETEIRNTVFHWARS-RGSLHSRSVSHIQTADLS 90

Query: 76  YLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPV 135
           YL+K Q QWE+RIQKSLNS C+E+ I L+R R  +DRD++ +KW ELSTY++DL+QYRP+
Sbjct: 91  YLKKTQIQWERRIQKSLNSTCSELNIPLARIRSTADRDELAEKWNELSTYDMDLSQYRPL 150

Query: 136 YAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNS 195
           YAPKDFL+VL S++  +++    E +WDF+ I + +K+L++LR +Y EL++G  ++G N 
Sbjct: 151 YAPKDFLDVLFSIRDPSFKKQLDELNWDFSHIQISVKTLAQLRHMYSELSQGLPLLGINP 210

Query: 196 YNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN 255
                  F  LE+ER  +GEKVLNS HAP+AQEFLK+GSPR LRG+IW  VLGS    ++
Sbjct: 211 DMPATEGFPNLEAERTHIGEKVLNSNHAPIAQEFLKRGSPRALRGRIWSLVLGSVIKDND 270

Query: 256 SKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILS-- 313
            +Y+E+LK+ VL YD++IDKL I DVQLTA NDDQYFVFED+LY+ +LCFSRD+EIL+  
Sbjct: 271 IEYYEELKNMVLQYDIVIDKLIIMDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEILAPV 330

Query: 314 IFEHSSASP-LYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTF 372
             + S+ S  ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYD+  + Y+TF
Sbjct: 331 TTDRSAGSQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDNPCTTYYTF 390

Query: 373 RAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMR 432
           RAFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EPQL++HFK IHI PIKIVFKW+MR
Sbjct: 391 RAFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPQLWVHFKNIHIQPIKIVFKWLMR 450

Query: 433 CFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
            FSGHLPP+Q+LYLWDLIL YDSLEII +LAV ILSFR+ENL+QV+T QNVE 
Sbjct: 451 GFSGHLPPEQLLYLWDLILGYDSLEIIPLLAVTILSFRKENLLQVNTQQNVEA 503

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110765123|ref|XP_623591.2| PREDICTED: TBC1 domain family member 19-like isoform 2 [Apis mellifera]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/475 (57%), Positives = 367/475 (77%), Gaps = 6/475 (1%)

Query: 17  TLFQRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSH---KIDLDSNSWAEP 73
           T  Q+LV S  +K  DFK+TLL+++K+ G+ET+IRNTVFHW+RS        +S +    
Sbjct: 41  TEIQKLVASTAVKREDFKNTLLDALKSNGLETEIRNTVFHWVRSQGSLSAASESTTNDVD 100

Query: 74  LTYLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYR 133
           LTYL+KAQ QWE+RIQKSLNS CNE+ + L+R R  +DR+++ +KW ELSTY++DL+QYR
Sbjct: 101 LTYLKKAQIQWERRIQKSLNSTCNELNVPLARIRPNADREELAEKWNELSTYDIDLSQYR 160

Query: 134 PVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGT 193
           P+YAPKDFL+VL S+++  ++    E +W+F+ I +++K+L +LR LY ELA+G  ++G 
Sbjct: 161 PLYAPKDFLDVLFSIRNPFFKKQPDELNWEFSHIEIRVKTLMQLRCLYVELAKGMPLLGV 220

Query: 194 NSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATP 253
           N     +  F  LE ERI +GEK+L S HAP+AQEFLK+G+PR LRG++W  VLGS    
Sbjct: 221 NPDMPSSENFANLEEERIYIGEKILKSNHAPIAQEFLKRGAPRALRGRLWSLVLGSAVKQ 280

Query: 254 DNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILS 313
           ++ +Y+E+LK+ VL YD++IDKL IKDVQLTA NDDQYFVFED+LY+ +LCFSRD+E+L+
Sbjct: 281 NDLEYYEELKNMVLQYDIVIDKLIIKDVQLTARNDDQYFVFEDVLYKTMLCFSRDSEVLA 340

Query: 314 IF---EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYF 370
                  +    ++  L+ K    EN +V+PPSG+IPFHGFTMYATPFCYLYDD  ++Y+
Sbjct: 341 PVTTDRSAGGQVIHAVLQGKPATLENTLVFPPSGVIPFHGFTMYATPFCYLYDDPCAMYY 400

Query: 371 TFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWI 430
           TFRAFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EP L++HF+ IHI PI+IVFKWI
Sbjct: 401 TFRAFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPLLWIHFRNIHIQPIRIVFKWI 460

Query: 431 MRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
           MR FSGHLPP+Q+L LWDLIL YDSLEII +LAV ILSFR+ENLMQV+  Q+VE 
Sbjct: 461 MRGFSGHLPPEQLLCLWDLILGYDSLEIIPLLAVTILSFRKENLMQVNNQQSVEA 515

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204884|gb|EFN83439.1| TBC1 domain family member 19 [Harpegnathos saltator]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/473 (57%), Positives = 363/473 (76%), Gaps = 8/473 (1%)

Query: 20  QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAE----PLT 75
           Q+LV S  + + DF ++L  ++K+ G+ET+IRNTVFHW+RS +  L S S +      L 
Sbjct: 36  QKLVASSAVNKEDFNNSLATALKSNGLETEIRNTVFHWVRS-RGSLHSQSVSHIEVTDLG 94

Query: 76  YLRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPV 135
           YL+K Q QWE+RIQKSLNS C+E+ I L+R R  SDR+++ +KW ELSTY++DL+QYRP+
Sbjct: 95  YLKKTQIQWERRIQKSLNSTCSELNIPLARIRPTSDREELAEKWNELSTYDIDLSQYRPL 154

Query: 136 YAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNS 195
           YAPKDFL+VL S++  +++    E +WDF+ I + +K+L++LR++Y ELA+G  ++G N+
Sbjct: 155 YAPKDFLDVLFSIRDPSFKKQPDELNWDFSHIQISVKTLTQLRRMYSELAQGVLLLGVNT 214

Query: 196 YNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN 255
                  F  LE+ER  +GEKVLN   AP+AQEFLK+GSPR LRG+IW  VLGS    ++
Sbjct: 215 DMPATENFPNLEAERTYIGEKVLNLNQAPIAQEFLKRGSPRSLRGRIWSFVLGSVIKDND 274

Query: 256 SKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIF 315
            +Y+ +LK+ VL YD+++DKL I DVQLTA NDDQYFVFED+LY+ +LCFSRD+EIL+  
Sbjct: 275 VEYYNELKNLVLQYDIVVDKLIIMDVQLTARNDDQYFVFEDILYKTMLCFSRDSEILAPV 334

Query: 316 ---EHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTF 372
                +    ++  L+ K    EN +V+PPSG++PFHGFTMYATPFCYLYDD  ++Y+TF
Sbjct: 335 TTDRSAGGQVIHAVLQGKPATLENTLVFPPSGVVPFHGFTMYATPFCYLYDDPCAMYYTF 394

Query: 373 RAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMR 432
           RAFYLRY++ LH VSS+EQGI++LC+LF RLLQ +EPQL+ HFK IHI PI+IVFKW+MR
Sbjct: 395 RAFYLRYWFRLHTVSSHEQGIVALCLLFERLLQCHEPQLWTHFKNIHIQPIRIVFKWLMR 454

Query: 433 CFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEV 485
            FSGHLPP+Q+LYLWDLIL YDSLEII +LAV ILSFR+ENL+QV+T QNVE 
Sbjct: 455 GFSGHLPPEQLLYLWDLILGYDSLEIIPLLAVTILSFRKENLLQVNTQQNVEA 507

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	503
UNIPROTKB|Q08DJ1	526	TBC1D19 "TBC1 domain family, m	0.906	0.866	0.460	1.8e-110
UNIPROTKB|Q8N5T2	526	TBC1D19 "TBC1 domain family me	0.906	0.866	0.460	7.8e-110
RGD|1304958	526	Tbc1d19 "TBC1 domain family, m	0.906	0.866	0.456	7.8e-110
ZFIN|ZDB-GENE-040426-1265	526	tbc1d19 "TBC1 domain family, m	0.904	0.865	0.450	1.6e-109
UNIPROTKB|F1NIK6	527	TBC1D19 "Uncharacterized prote	0.908	0.867	0.450	2.4e-108
UNIPROTKB|F1PW95	433	TBC1D19 "Uncharacterized prote	0.807	0.937	0.481	6.5e-106
UNIPROTKB|F1S5A2	493	TBC1D19 "Uncharacterized prote	0.858	0.876	0.460	7.5e-105
UNIPROTKB|B9A6M0	461	TBC1D19 "TBC1 domain family, m	0.805	0.878	0.480	1.6e-104
FB|FBgn0031690	509	CG7742 [Drosophila melanogaste	0.866	0.856	0.403	2.4e-85
UNIPROTKB|D6RA74	223	TBC1D19 "TBC1 domain family me	0.379	0.856	0.397	8e-37

UNIPROTKB|Q08DJ1 TBC1D19 "TBC1 domain family, member 19" [Bos taurus (taxid:9913)]

 Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
 Identities = 215/467 (46%), Positives = 301/467 (64%)

Query:    26 PCIKESDFKSTLLESIKNVGIETQIRNTVFHWMR-----SHKIDLDSNSWAEPLTYLRKA 80
             P IK    K  + E  K  G E +++N V+  +      SH          EPL Y+RKA
Sbjct:    39 PEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSVFPLPSHPA-APPEHLKEPLVYMRKA 97

Query:    81 QFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKD 140
             Q  WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYAPKD
Sbjct:    98 QGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKD 157

Query:   141 FLEVLISLKSSNYRSVEG---EGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYN 197
             FLEVLI+L++ NY S +           Q+PLK+K + EL++ + EL      +G +   
Sbjct:   158 FLEVLINLRNPNYESGDSLSFRTHLGLIQVPLKVKDIPELKEFFVELGLTTGQLGIDDST 217

Query:   198 NPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSK 257
                P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P++  
Sbjct:   218 QVPP--ELFENEHVRIGQKVLTQQDSAAAQQYIRQGSPTALRAELWALILNISSHPEDIL 275

Query:   258 YFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEH 317
             Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +LS F +
Sbjct:   276 YYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAY 335

Query:   318 SSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYL 377
             +SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR  Y+
Sbjct:   336 NSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYV 395

Query:   378 RYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGH 437
             R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R FSG+
Sbjct:   396 RFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGY 455

Query:   438 LPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E
Sbjct:   456 LATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAE 502

GO:0005622 "intracellular" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|Q8N5T2 TBC1D19 "TBC1 domain family member 19" [Homo sapiens (taxid:9606)]

 Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
 Identities = 215/467 (46%), Positives = 300/467 (64%)

Query:    26 PCIKESDFKSTLLESIKNVGIETQIRNTVFHWMR-----SHKIDLDSNSWAEPLTYLRKA 80
             P IK    K  + E  K  G E +++N V+  +      SH          EPL Y+RKA
Sbjct:    39 PEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSVFPLPSHPA-APPEHLKEPLVYMRKA 97

Query:    81 QFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKD 140
             Q  WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYAPKD
Sbjct:    98 QGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKD 157

Query:   141 FLEVLISLKSSNYR---SVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYN 197
             FLEVLI+L++ NY    S+         Q+PLK+K + EL++ + EL      +G +   
Sbjct:   158 FLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDST 217

Query:   198 NPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSK 257
                P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P++  
Sbjct:   218 QVPP--ELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPEDVL 275

Query:   258 YFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEH 317
             Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +LS F  
Sbjct:   276 YYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAF 335

Query:   318 SSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYL 377
             +SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR  Y+
Sbjct:   336 NSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYV 395

Query:   378 RYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGH 437
             R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R FSG+
Sbjct:   396 RFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGY 455

Query:   438 LPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E
Sbjct:   456 LATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAE 502

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1304958 Tbc1d19 "TBC1 domain family, member 19" [Rattus norvegicus (taxid:10116)]

 Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
 Identities = 213/467 (45%), Positives = 300/467 (64%)

Query:    26 PCIKESDFKSTLLESIKNVGIETQIRNTVFHWMR-----SHKIDLDSNSWAEPLTYLRKA 80
             P I+    K  + E  K  G E +++N V+  +      SH          EPL Y+RKA
Sbjct:    39 PEIRLESLKEDIKEFFKISGWEKKLQNAVYSELNVFPLPSHP-SAPPEHLKEPLVYMRKA 97

Query:    81 QFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKD 140
             Q  WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYAPKD
Sbjct:    98 QGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKD 157

Query:   141 FLEVLISLKSSNYR---SVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYN 197
             FLEVLI+L++ NY    S+         Q+PLK+K + EL++ + EL      +G +   
Sbjct:   158 FLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNTGQLGIDDST 217

Query:   198 NPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSK 257
                P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P++  
Sbjct:   218 QVPP--ELFENEHVRIGQKVLAQQDSAAAQQYVRQGSPTALRAELWALILNISSQPEDIL 275

Query:   258 YFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEH 317
             Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +L  F +
Sbjct:   276 YYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLGHFAY 335

Query:   318 SSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYL 377
             +SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR  Y+
Sbjct:   336 NSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPYKLYQIFREMYV 395

Query:   378 RYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGH 437
             R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R FSG+
Sbjct:   396 RFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGY 455

Query:   438 LPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E
Sbjct:   456 LATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAE 502

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-040426-1265 tbc1d19 "TBC1 domain family, member 19" [Danio rerio (taxid:7955)]

 Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
 Identities = 211/468 (45%), Positives = 308/468 (65%)

Query:    26 PCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWA------EPLTYLRK 79
             P IK    K  +   +K  G E +++N V+  +  H +    +  A      EPL Y+ K
Sbjct:    39 PEIKLETLKDDVRRVLKASGWERKLQNAVYREL--HVLPPPGHPRAPPEHTKEPLAYMLK 96

Query:    80 AQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPK 139
             AQ  WEKRI KSLNSMC E+GI L+R R   ++ ++ +KW E+ T E DL+ +RPVYAPK
Sbjct:    97 AQASWEKRILKSLNSMCTELGIPLARKRPVMEQKELTNKWNEMGTDEPDLSNFRPVYAPK 156

Query:   140 DFLEVLISLKSSNY-RS--VEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSY 196
             DFLEVLI L++ N  RS  +  +  W   Q+ L +  + ++R+ Y EL      +G + +
Sbjct:   157 DFLEVLIGLRNPNTERSDDLTVKSHWGLIQVSLNVHDIPQMRETYAELGLSYGQLGIDDH 216

Query:   197 NNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNS 256
              +  P  +  ESE I +G+KV++ + +  AQ++ ++G P  LR ++W  +L +   P++ 
Sbjct:   217 THVPP--DLFESEHIHIGKKVVSEQDSAAAQQYSRQGCPTGLRAQLWSLILNTTNDPEDI 274

Query:   257 KYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFE 316
              ++EQLK+ V+ ++LL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +L  F 
Sbjct:   275 THYEQLKARVIHHNLLVDNLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTAVLEHFN 334

Query:   317 HSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFY 376
             ++SASP    +++K+ + +  VVYPP+G+IPFHGF+MY  P C+LY++   LY  FR  Y
Sbjct:   335 YNSASPPKSSIQSKSGSEQCAVVYPPNGVIPFHGFSMYVAPLCFLYNEPSKLYSVFREMY 394

Query:   377 LRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSG 436
             +RYF+ LH +SS+  GI+SLC+ F RLLQ + PQLF H + I   P++I FKWI+R FSG
Sbjct:   395 IRYFFRLHSISSHPSGIVSLCLQFERLLQAHLPQLFYHLREIGAQPLRIAFKWIVRAFSG 454

Query:   437 HLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             +L  DQ+L LWD IL Y+SLEI+++LA A+ +FR ENLM+V +L + E
Sbjct:   455 YLSTDQLLLLWDRILGYNSLEIVAVLATAVFAFRAENLMEVTSLASAE 502

GO:0005622 "intracellular" evidence=IEA

GO:0032313 "regulation of Rab GTPase activity" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|F1NIK6 TBC1D19 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
 Identities = 211/468 (45%), Positives = 300/468 (64%)

Query:    25 SPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMR-----SHKIDLDSNSWAEPLTYLRK 79
             +P IK    K  + + +K  G E +++N V+  +       H          EPL Y+RK
Sbjct:    39 NPEIKLESLKEDIKDFLKTSGWEKKLQNAVYSELNVFPSPCHPA-APPEHMKEPLAYMRK 97

Query:    80 AQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPK 139
             AQ  WEKRI KSLNSMC E+ I L++ R  S++ ++ +KW E+ T E DL+ +RPVYAPK
Sbjct:    98 AQGSWEKRILKSLNSMCTELSIPLAQKRPASEQKELLNKWNEMGTDEPDLSLFRPVYAPK 157

Query:   140 DFLEVLISLKSSNYRSVEG---EGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSY 196
             DFLEVL++L++ NY + E           Q+PLK+K + EL++ + EL      +G +  
Sbjct:   158 DFLEVLMNLRNPNYENGEQLSFRNHLGLIQVPLKVKDIPELKEDFSELDLNVGQLGIDDS 217

Query:   197 NNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNS 256
                 P F   E+E + +G+KVL  + +  AQ+++++G P  LR  +W  +L     P++ 
Sbjct:   218 AQVPPEF--FENEHVRIGQKVLAEQDSAAAQQYVRQGCPTALRADLWALILNISNQPEDI 275

Query:   257 KYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFE 316
              Y+EQLKS+V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +L  F 
Sbjct:   276 LYYEQLKSNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLEHFA 335

Query:   317 HSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFY 376
             +SSA+P    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR  Y
Sbjct:   336 YSSATPPKSYIRGKLGIEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMY 395

Query:   377 LRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSG 436
             +R+F+ LH +SS+  GI+SLC+LF  LLQ + PQLF H + I   P++I FKW++R FSG
Sbjct:   396 VRFFFRLHSISSHPSGIVSLCLLFETLLQTHLPQLFYHLREIGAQPLRISFKWMVRAFSG 455

Query:   437 HLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             +L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E
Sbjct:   456 YLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAE 503

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1PW95 TBC1D19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
 Identities = 198/411 (48%), Positives = 278/411 (67%)

Query:    77 LRKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVY 136
             +RKAQ  WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVY
Sbjct:     1 MRKAQGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVY 60

Query:   137 APKDFLEVLISLKSSNYR---SVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGT 193
             APKDFLEVLI+L++ NY    S+         Q+PLK+K + EL++ + EL      +G 
Sbjct:    61 APKDFLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKEFFVELGLTTGQLGI 120

Query:   194 NSYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATP 253
             +      P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P
Sbjct:   121 DDSTQVPP--ELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQP 178

Query:   254 DNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILS 313
             ++  Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +L 
Sbjct:   179 EDILYYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLG 238

Query:   314 IFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFR 373
              F ++SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR
Sbjct:   239 HFAYNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFR 298

Query:   374 AFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRC 433
               Y+R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R 
Sbjct:   299 EMYVRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRA 358

Query:   434 FSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             FSG+L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E
Sbjct:   359 FSGYLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAE 409

GO:0005622 "intracellular" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|F1S5A2 TBC1D19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
 Identities = 204/443 (46%), Positives = 285/443 (64%)

Query:    26 PCIKESDFKSTLLESIKNVGIETQIRNTVFHWMR-----SHKIDLDSNSWAEPLTYLRKA 80
             P IK    K  + E  K  G E +++N V+  +      SH          EPL Y+RKA
Sbjct:    40 PEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSVFPLPSHPA-APPEHLKEPLVYMRKA 98

Query:    81 QFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPKD 140
             Q  WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYAPKD
Sbjct:    99 QGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKD 158

Query:   141 FLEVLISLKSSNYRSVEG---EGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTNSYN 197
             FLEVLI+L++ NY S +           Q+PLK+K + EL++ + EL      +G +   
Sbjct:   159 FLEVLINLRNPNYESGDSLSFRTHLGLIQVPLKVKDIPELKEFFVELGLSTGQLGIDDST 218

Query:   198 NPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSK 257
                P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P++  
Sbjct:   219 QVPP--ELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPEDIL 276

Query:   258 YFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEH 317
             Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +LS F +
Sbjct:   277 YYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAY 336

Query:   318 SSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYL 377
             +SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR  Y+
Sbjct:   337 NSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYV 396

Query:   378 RYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGH 437
             R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R FSG+
Sbjct:   397 RFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGY 456

Query:   438 LPPDQILYLWDLILAYDSLEIIS 460
             L  DQ+L LWD IL Y+SLEI++
Sbjct:   457 LATDQLLLLWDRILGYNSLEILA 479

GO:0005622 "intracellular" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|B9A6M0 TBC1D19 "TBC1 domain family, member 19" [Homo sapiens (taxid:9606)]

 Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
 Identities = 197/410 (48%), Positives = 276/410 (67%)

Query:    78 RKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYA 137
             R+A   WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYA
Sbjct:    30 RQAWGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYA 89

Query:   138 PKDFLEVLISLKSSNYR---SVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTN 194
             PKDFLEVLI+L++ NY    S+         Q+PLK+K + EL++ + EL      +G +
Sbjct:    90 PKDFLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNIGQLGID 149

Query:   195 SYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPD 254
                   P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P+
Sbjct:   150 DSTQVPP--ELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPE 207

Query:   255 NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSI 314
             +  Y+EQLK++V+ +DLL+D L  KDV+LTASNDD YFVFED LYQ+LLCFSRDT +LS 
Sbjct:   208 DVLYYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSH 267

Query:   315 FEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA 374
             F  +SASP    ++ K    E  V YPP+G+IPFHGF+MY  P C+LY +   LY  FR 
Sbjct:   268 FAFNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFRE 327

Query:   375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCF 434
              Y+R+F+ LH +SS+  GI+SLC+LF  LLQ Y PQLF H + I   P++I FKW++R F
Sbjct:   328 MYVRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAF 387

Query:   435 SGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVE 484
             SG+L  DQ+L LWD IL Y+SLEI+++LA A+ +FR  NLM+V +L   E
Sbjct:   388 SGYLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAE 437

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0031690 CG7742 [Drosophila melanogaster (taxid:7227)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 195/483 (40%), Positives = 292/483 (60%)

Query:    20 QRLVVSPCIKESDFKSTLLESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYLRK 79
             Q+LV +P +   D ++TL ++IK+ G+ET+IRN V++ +R+     D  + A        
Sbjct:    34 QKLVCNPSVDTHDMRNTLEDAIKSAGLETEIRNIVYNLVRTRLSKTDDKNLANK------ 87

Query:    80 AQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYAPK 139
                Q  K             G+   R R+   R  +    TEL   +V L     + A +
Sbjct:    88 ---QGAKPTVSDPLGYLKRAGVLWDR-RV---RKSLNAMCTEL---KVPLHGQPRISADR 137

Query:   140 -DFLEVLISLKS-----SNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGE-SVIG 192
              DF+     L +     +NYR V      D  ++ L +K  ++  +   ++ + E S I 
Sbjct:   138 EDFMAKWNELSNYNMDLANYRPVYAPK--DLLEVLLSLKGPAKTTENTDQIPQWEFSHIA 195

Query:   193 T---NSYNNPNPYFNALESER------ITLG-EKVLNSKHAPVAQEFLKKG-SPRCLRGK 241
                 N +     Y + L S+       +T+  +++L ++HAP+ Q+FLKKG +P   RG 
Sbjct:   196 LPVKNLFELRAHYADLLRSDSYLGVPDLTVQCQRILEARHAPMCQQFLKKGCTPAPYRGA 255

Query:   242 IWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQI 301
             +W  VL S+    + +Y+++L+++V T D ++DKL  KD+QLTASNDDQYFVFED+LYQ+
Sbjct:   256 LWASVLDSKLHDYDIEYWQKLRNAVWTTDHIVDKLVFKDIQLTASNDDQYFVFEDVLYQV 315

Query:   302 LLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYL 361
             LLCFSRDT+I    E+ +      P+K K          PPSG++PFHG  M+A PFCYL
Sbjct:   316 LLCFSRDTDIGGCVEYETF-----PVKGKTYEG------PPSGVVPFHGICMFAAPFCYL 364

Query:   362 YDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIH 421
             YD  +SLY+TFRAFY+RY + L  ++++ QGI+SLC+LF +LLQ YEPQL+ HF+ + I 
Sbjct:   365 YDSPVSLYYTFRAFYIRYCHRLTTINTHPQGIVSLCLLFEKLLQTYEPQLWSHFRELQIQ 424

Query:   422 PIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQ 481
             P+++VFKW+MR FSGHLPPDQ+L LWDLIL +DSLEI+ + A+ ILSFR+E++MQV +L 
Sbjct:   425 PLRVVFKWLMRAFSGHLPPDQLLVLWDLILGFDSLEILPLFAIIILSFRKESIMQVASLD 484

Query:   482 NVE 484
             ++E
Sbjct:   485 SIE 487

GO:0032313 "regulation of Rab GTPase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005097 "Rab GTPase activator activity" evidence=IEA

UNIPROTKB|D6RA74 TBC1D19 "TBC1 domain family member 19" [Homo sapiens (taxid:9606)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 78/196 (39%), Positives = 123/196 (62%)

Query:    78 RKAQFQWEKRIQKSLNSMCNEIGIQLSRFRLPSDRDDMKDKWTELSTYEVDLTQYRPVYA 137
             R+A   WEKRI KSLNSMC E+ I L+R R   ++ ++ +KW E+ T E DL+ +RPVYA
Sbjct:    30 RQAWGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYA 89

Query:   138 PKDFLEVLISLKSSNYR---SVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGTN 194
             PKDFLEVLI+L++ NY    S+         Q+PLK+K + EL++ + EL      +G +
Sbjct:    90 PKDFLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNIGQLGID 149

Query:   195 SYNNPNPYFNALESERITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPD 254
                   P     E+E + +G+KVL  + +  AQ+++++GSP  LR ++W  +L   + P+
Sbjct:   150 DSTQVPP--ELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPE 207

Query:   255 NSKYFEQLKSSVLTYD 270
             +  Y+EQLK++V+ +D
Sbjct:   208 DVLYYEQLKTNVIQHD 223

GO:0005097 "Rab GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8N5T2	TBC19_HUMAN	No assigned EC number	0.4605	0.9065	0.8669	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	503
pfam00566	206	pfam00566, RabGAP-TBC, Rab-GTPase-TBC domain	7e-16
smart00164	216	smart00164, TBC, Domain in Tre-2, BUB2p, and Cdc16	3e-12
COG5210	496	COG5210, COG5210, GTPase-activating protein [Gener	5e-07

>gnl|CDD|215997 pfam00566, RabGAP-TBC, Rab-GTPase-TBC domain

 Score = 75.9 bits (187), Expect = 7e-16
 Identities = 53/244 (21%), Positives = 93/244 (38%), Gaps = 46/244 (18%)

Query: 238 LRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFE-- 295
           LRG++W  +LG+ +         Q    +   D   ++   KDV  T  +   +F     
Sbjct: 3   LRGEVWKLLLGNLSESKQRDSVSQYSKLLKLEDSPDEEQIEKDVPRTFPHHF-FFKNGEG 61

Query: 296 -DLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMY 354
              L +IL  +S                          N +  V Y         G    
Sbjct: 62  QQQLRRILKAYS------------------------IYNPD--VGY-------CQGMNFI 88

Query: 355 ATPFCYLYDDVISLYFTFRA---FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQL 411
           A P   +  D    ++ F +   + LR F+       +  G+     +F  LL++++P+L
Sbjct: 89  AAPLLLVVLDEEEAFWCFVSLLEYLLRDFF-----LPSFPGLQRDLYVFEELLKKHDPEL 143

Query: 412 FLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRR 471
           + H + + + P     KW +  F+  LP + +L LWDL L      +  + A+AIL   R
Sbjct: 144 YKHLQKLGLDPSLFASKWFLTLFARELPLETVLRLWDLFLEGGKFFLFRV-ALAILKRFR 202

Query: 472 ENLM 475
           + L+
Sbjct: 203 KELL 206

Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, implies that these domains are GTPase activator proteins of Rab-like small GTPases. Length = 206

>gnl|CDD|214540 smart00164, TBC, Domain in Tre-2, BUB2p, and Cdc16p

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 51/251 (20%), Positives = 95/251 (37%), Gaps = 42/251 (16%)

Query: 231 KKGSPRCLRGKIWCQVLG--SEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASND 288
           +KG P  LRG +W  +L      T  +   + +L       D  I     KD++ T    
Sbjct: 2   RKGVPPSLRGVVWKLLLNAQPMDTSADKDLYSRLLKETAPDDKSIVHQIEKDLRRTFPEH 61

Query: 289 ----DQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSG 344
               D+    ++ L ++L  ++                    L N        V Y    
Sbjct: 62  SFFQDKEGPGQESLRRVLKAYA--------------------LYNPE------VGYCQ-- 93

Query: 345 IIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLL 404
                G    A P   + +D    ++       RY  + +    +  G+    +   RL+
Sbjct: 94  -----GMNFLAAPLLLVMEDEEDAFWCLVKLMERYGPNFY--LPDMSGLQLDLLQLDRLV 146

Query: 405 QRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAV 464
           + Y+P L+ H K + I P     +W +  F+  LP + +L +WD +L  +  + +  +A+
Sbjct: 147 KEYDPDLYKHLKDLGITPSLYALRWFLTLFARELPLEIVLRIWD-VLFAEGSDFLFRVAL 205

Query: 465 AILSFRRENLM 475
           A+L   R+ L+
Sbjct: 206 ALLKLHRDVLL 216

Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases. Length = 216

>gnl|CDD|227535 COG5210, COG5210, GTPase-activating protein [General function prediction only]

 Score = 51.7 bits (124), Expect = 5e-07
 Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 53/270 (19%)

Query: 227 QEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTI-------K 279
           +E ++KG P  LRG +W  +LG     D +    +     L         T        K
Sbjct: 206 RELIRKGIPNELRGDVWEFLLGIGFDLDKNPGLYERL---LNLHREAKIPTQEIISQIEK 262

Query: 280 DVQLTASNDDQYFVFE----DLLYQILLCFS-RDTEILSIFEHSS-ASPLYGPLKNKNTN 333
           D+  T  ++  +        + L ++L  +S  + E+  +   +  A+PL   L+++   
Sbjct: 263 DLSRTFPDNSLFQTEISIRAENLRRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQA 322

Query: 334 TENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGI 393
              LV                                  + + L   Y L  +S    G+
Sbjct: 323 FWCLV-------------------------------KLLKNYGLP-GYFLKNLS----GL 346

Query: 394 LSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAY 453
                +   L++  +P+L+ H     +  +   F+W +  F    P +  L +WD +   
Sbjct: 347 HRDLKVLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLE 406

Query: 454 DSLEIISILAVAILSFRRENLMQVDTLQNV 483
            S  ++  LA+AIL   R+ L+++D+ + +
Sbjct: 407 GS-SMLFQLALAILKLLRDKLLKLDSDELL 435

Length = 496

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	503
KOG2058|consensus	436		100.0
smart00164	199	TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable R	100.0
COG5210	496	GTPase-activating protein [General function predic	99.97
KOG4567|consensus	370		99.97
KOG1092|consensus	484		99.97
PF00566	214	RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR00	99.96
KOG2223|consensus	586		99.94
KOG2222|consensus	848		99.94
KOG1093|consensus	725		99.93
KOG4347|consensus	671		99.93
KOG4436|consensus	948		99.88
KOG1102|consensus	397		99.87
KOG2224|consensus	781		99.77
KOG2221|consensus	267		99.67
KOG2197|consensus	488		99.66
KOG3636|consensus	669		99.62
KOG2595|consensus	395		99.61
KOG1091|consensus	625		99.5
KOG4436|consensus	948		99.35
KOG2801|consensus	559		97.76
PF14961	1296	BROMI: Broad-minded protein	97.32
KOG2224|consensus	781		94.76
KOG1648|consensus	813		89.93

>KOG2058|consensus

Probab=100.00  E-value=1.2e-43  Score=370.42  Aligned_cols=320  Identities=19%  Similarity=0.259  Sum_probs=251.2

Q ss_pred             hhhhhhhhcccccCCCcccccccCchhHHHHHHhhcCCCCcCCCCCCCCcccccccCCCChHHHHHHHHHHhccCCcccc
Q psy7828         114 DMKDKWTELSTYEVDLTQYRPVYAPKDFLEVLISLKSSNYRSVEGEGSWDFTQIPLKIKSLSELRQLYKELARGESVIGT  193 (503)
Q Consensus       114 ~~~~kw~e~~~~~~d~~~~~~~y~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lr~~y~~l~~~~~~~g~  193 (503)
                      .+.++|+|.-... |+.+-++.++   .-+.++++..+.. .....+.|++-+..-..+ ..++-+.++.......    
T Consensus        51 ~~~~~~~e~~~~~-~~~~~~~~~~---~~e~l~a~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~k~~s~~~~~~~----  120 (436)
T KOG2058|consen   51 TLGNKYEESKEDL-KLVQKVISWA---IRELLQAIEDLMS-KNNGFDQYSLQKLIGLPP-SDGYLKWLSSYLAYEE----  120 (436)
T ss_pred             ccccchhccccch-hcccccchhh---hhhhhhhhhhhhh-ccCcccccchhhcccCCc-chhhhHHHHHhhhhhh----
Confidence            4678888776666 6666677777   4444556666665 233457888876665444 4444455544433221    


Q ss_pred             cCCCCCCcchhhhHHHHHHHHHHHhcC-----------CChHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHH
Q psy7828         194 NSYNNPNPYFNALESERITLGEKVLNS-----------KHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQL  262 (503)
Q Consensus       194 ~d~~~~~~~~~~~~~er~~~~~~vl~~-----------~~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L  262 (503)
                                     .|...++..+..           ..++++++++|+|||+++||.||..++|.......+++|+.|
T Consensus       121 ---------------r~~~~~~l~~~~~~~~~~~~~~~~~s~elk~liRkGiP~~~R~~VW~~~~g~~~~~~~~~~yq~l  185 (436)
T KOG2058|consen  121 ---------------RRQLRWELELQSNIKLHSPNDFPPRSDELKRLIRKGIPPELRGEVWWVLSGARRQLNYPGYYQEL  185 (436)
T ss_pred             ---------------hHHHHHHHHhhhhhcccccccccCCcHHHHHHHHcCCChhhhhHHHHHHhcchhhccCchhHHHH
Confidence                           111112222222           227899999999999999999999999944333337899999


Q ss_pred             HHcccccchHHHHHhhhccCCcCCCCCCCch-----hhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccc
Q psy7828         263 KSSVLTYDLLIDKLTIKDVQLTASNDDQYFV-----FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENL  337 (503)
Q Consensus       263 ~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~-----f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~  337 (503)
                      .+..........++|+.|+.||||++..+|.     +.+.+++||.||++.+                            
T Consensus       186 l~~~~~~~~~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya~hN----------------------------  237 (436)
T KOG2058|consen  186 LRKGDEKKSPVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYARHN----------------------------  237 (436)
T ss_pred             HhcCCCccchHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHHhhC----------------------------
Confidence            8876655545667999999999998844443     2457899999998754                            


Q ss_pred             cccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHh
Q psy7828         338 VVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKT  417 (503)
Q Consensus       338 ~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~  417 (503)
                         |..|  ||||||.+||++|+++++||+|||||+.++++|+++  |+.+.-.|.+..+.+|+.||+..+|+|+.||+.
T Consensus       238 ---p~vG--YCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~--Yyt~nL~g~qvDQ~VL~~llre~lPkl~~~l~~  310 (436)
T KOG2058|consen  238 ---PSVG--YCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPR--YYTPNLIGSQVDQKVLRELLREKLPKLSLHLEG  310 (436)
T ss_pred             ---CCCc--chhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchh--hcCchhhhhhccHHHHHHHHHHHCHHHHHhhhh
Confidence               2235  899999999999999999999999999999999997  555455799999999999999999999999999


Q ss_pred             cCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCC
Q psy7828         418 IHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRY  494 (503)
Q Consensus       418 ~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~  494 (503)
                      ++++..+++++||+|+|++.+|.+++|||||++|+ +|.+++|++|+|+++..+++|+++++..++.++|+++..-.
T Consensus       311 ~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~-eGskvlfr~Alai~k~~ee~il~~~~~~~i~~~~~~~~~~~  386 (436)
T KOG2058|consen  311 NGVDASLETLPWFLTLFVDILPSETVLRIWDCLFY-EGSKVLFRVALAILKKHEEEILKEDSSKEILRVLPDLTKRS  386 (436)
T ss_pred             cCCCeeeeehhhhHHHhcccccHHHHHHHHHHHHh-cccHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999 77899999999999999999999999999999998776543

>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p

Probab=100.00  E-value=2.7e-33  Score=267.10  Aligned_cols=190  Identities=22%  Similarity=0.438  Sum_probs=158.8

Q ss_pred             hhcCCCcchHHHHHHHhhCCCCCCC--ChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc----hhhHHHHHHHH
Q psy7828         230 LKKGSPRCLRGKIWCQVLGSEATPD--NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF----VFEDLLYQILL  303 (503)
Q Consensus       230 ~r~GIP~~lR~~VW~~LLg~~~~~~--~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf----~f~d~l~qvl~  303 (503)
                      .++|||+++|+.+|+.++|+.....  ....|+++++.....+....++|.+||+||++++..|.    +.++.+.+|+.
T Consensus         1 ~~~Gip~~~R~~vW~~ll~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~   80 (199)
T smart00164        1 VRKGVPPSLRGVVWKLLLNAQPMDTSADKDLYSRLLKETAPKDKSIVHQIEKDLRRTFPEHSFFQDKEGPGQESLRRVLK   80 (199)
T ss_pred             CCCCCCHHHHHHHHHHHhCCchhhhcccchHHHHHHHhhcCCChhhHHHHhcccCCCCCCchhhcCCCcccHHHHHHHHH
Confidence            3789999999999999999998743  36899999887554443345799999999998765442    35667777777


Q ss_pred             hhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhccc
Q psy7828         304 CFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHL  383 (503)
Q Consensus       304 afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l  383 (503)
                      ||+..                               .|..|  |+|||+.+||++++++.+|++|||||.++++++.+  
T Consensus        81 ~~~~~-------------------------------~p~~g--Y~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~--  125 (199)
T smart00164       81 AYALY-------------------------------NPEVG--YCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGP--  125 (199)
T ss_pred             HHHHH-------------------------------CCCCc--eeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCc--
Confidence            77542                               23335  88999999999999988899999999999999854  


Q ss_pred             CCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHh-cCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828         384 HQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKT-IHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD  454 (503)
Q Consensus       384 ~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~-~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~  454 (503)
                      .++....+|+...+.+|+.++++++|+|++||++ .|+.+..|+++||+|+|++++|++.++||||.|+.+|
T Consensus       126 ~~~~~~~~~~~~~~~~~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG  197 (199)
T smart00164      126 NFYLPDMSGLQLDLLQLDRLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEG  197 (199)
T ss_pred             ccCCCChHHHHHHHHHHHHHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcC
Confidence            4334344688899999999999999999999996 9999999999999999999999999999999999954

Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.

>COG5210 GTPase-activating protein [General function prediction only]

Probab=99.97  E-value=2.7e-31  Score=287.86  Aligned_cols=234  Identities=20%  Similarity=0.362  Sum_probs=192.3

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCCCCC-CChHHHHHHHHcccccch---HHHHHhhhccCCcCCCCCCCch--hhH
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATP-DNSKYFEQLKSSVLTYDL---LIDKLTIKDVQLTASNDDQYFV--FED  296 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~-~~~~~Ye~L~~~~~~~~~---~~d~lI~kDv~RT~~~d~~yf~--f~d  296 (503)
                      ..+++.+++.|||+.+|+.+|..++|..... ...+.|+.+.+...++..   ....+|++|+.||++.+..|.-  ...
T Consensus       202 ~~~~~~~i~~gip~~~r~~vw~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~Dl~rt~~~~~~f~~~~s~~  281 (496)
T COG5210         202 LSKLRELIRKGIPNELRGDVWEFLLGIGFDLDKNPGLYERLLNLHREAKIPTQEIISQIEKDLSRTFPDNSLFQTEISIR  281 (496)
T ss_pred             HHHHHHHHHhcCChHhhhhhHHHHhccchhhccCchHHHHHHHHHHhcCCCcHHHHHHHHccccccccccccccCccccc
Confidence            5679999999999999999999999998763 345677777664332222   2467999999999987665421  111


Q ss_pred             --HHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHH
Q psy7828         297 --LLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA  374 (503)
Q Consensus       297 --~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~  374 (503)
                        .+.+|+.||+..                               .|..|  |+|||+.++|||++++.+|++|||||+.
T Consensus       282 ~~~L~rvL~ays~~-------------------------------~p~vg--Y~QgMn~l~a~ll~~~~~Ee~AF~~l~~  328 (496)
T COG5210         282 AENLRRVLKAYSLY-------------------------------NPEVG--YVQGMNFLAAPLLLVLESEEQAFWCLVK  328 (496)
T ss_pred             HHHHHHHHHHHHhc-------------------------------CCCCc--eeccHHHHHHHHHHHhhhhHHHHHHHHH
Confidence              255555555432                               24446  7899999999999999889999999999


Q ss_pred             HHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828         375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD  454 (503)
Q Consensus       375 L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~  454 (503)
                      |+++++....+..+ .+|+...+.+|+.+++..+|+||+||...|+...+|+++||+|+|++++|++.++||||++|. +
T Consensus       329 L~~~~~l~~~~~~~-~~G~~~~~~~l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~-e  406 (496)
T COG5210         329 LLKNYGLPGYFLKN-LSGLHRDLKVLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFL-E  406 (496)
T ss_pred             HHHhccchhhcccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHH-h
Confidence            99966444445554 389999999999999999999999999999999999999999999999999999999999999 6


Q ss_pred             CchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhccc
Q psy7828         455 SLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILY  491 (503)
Q Consensus       455 ~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls  491 (503)
                      |..+++.+++|++...+..++.+++...+..++.++.
T Consensus       407 g~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~  443 (496)
T COG5210         407 GSSMLFQLALAILKLLRDKLLKLDSDELLDLLLKQLF  443 (496)
T ss_pred             ccHHHHHHHHHHHHhhhhhhhccCchhHHHHHHHhhh
Confidence            6889999999999999999999998887777776553

>KOG4567|consensus

Probab=99.97  E-value=4.4e-30  Score=253.40  Aligned_cols=279  Identities=20%  Similarity=0.299  Sum_probs=192.1

Q ss_pred             hHHHHHHHHHHHhcCCC----hHHHHhhhhcCCC--cchHHHHHHHhhCCCCCCCC---------hHHHHHHHHccccc-
Q psy7828         206 LESERITLGEKVLNSKH----APVAQEFLKKGSP--RCLRGKIWCQVLGSEATPDN---------SKYFEQLKSSVLTY-  269 (503)
Q Consensus       206 ~~~er~~~~~~vl~~~~----~~~l~~l~r~GIP--~~lR~~VW~~LLg~~~~~~~---------~~~Ye~L~~~~~~~-  269 (503)
                      +-.+|++..+.+++..+    ..++++++..|+|  .++|+.+|+++||+.+....         +..|.+...+.... 
T Consensus         4 ~~~~r~~~~edvl~~~~~~id~kelr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~~w~s~La~~R~~Y~q~i~e~v~ep   83 (370)
T KOG4567|consen    4 LYKERIKSIEDVLNPADDTIDLKELRKLCFYGVPDDASLRPLVWKLLLGYLPPERSKWTSFLAKKRSLYKQFIEEIVDEP   83 (370)
T ss_pred             hhhhhhhhHHHhhccccchhhHHHHHHHhhcCCCCccchhHhHHHHHHhhcChhhhhhHHHHHHHHHHHHHHHHHhccCc
Confidence            44567777888887766    4689999999999  69999999999999886432         35566555442100 


Q ss_pred             --ch-------------------------------HHHHHhhhccCCcCCCCCCCchhhHHHHHHHHhhc-c-chhhhhh
Q psy7828         270 --DL-------------------------------LIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFS-R-DTEILSI  314 (503)
Q Consensus       270 --~~-------------------------------~~d~lI~kDv~RT~~~d~~yf~f~d~l~qvl~afs-r-d~~vl~~  314 (503)
                        ..                               ..-.+|++|+.||.| +..||.-.-       .|. + .....+.
T Consensus        84 g~~~~~~~v~~~D~~~dhPls~~~~sdwn~ff~d~e~l~QIdrDvrr~~p-di~ff~~~~-------~~p~~~~~~~~~~  155 (370)
T KOG4567|consen   84 GKKDNSKKVDSNDTDEDHPLSLGPTSDWNTFFKDCEVLLQIDRDVRRTHP-DISFFQLAS-------SYPCRQGMDSRRR  155 (370)
T ss_pred             cccccccccccCcccccCCCCCCchhhHHHHhhhhHHHHHHHHHHHHhCc-chHhhhhcc-------ccccccchhhHhh
Confidence              00                               011356666666632 222221100       000 0 0000000


Q ss_pred             hhcc-CCCCCCccccc---cccccccccccCCCCCccccchHHHHHHHHHhccC----------hhHHHHHHHHHHHHhh
Q psy7828         315 FEHS-SASPLYGPLKN---KNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDD----------VISLYFTFRAFYLRYF  380 (503)
Q Consensus       315 i~~~-s~~~~~~~l~~---~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~d----------EedaFw~f~~L~~~~~  380 (503)
                      +..+ .+-+.+..+.+   .+.+-.++.+.|  |+-|+||||.|+||+.||+.+          |+|||+||++||... 
T Consensus       156 i~~~q~~~~n~~gl~~~~~erilfiyAKLNp--Gi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMsei-  232 (370)
T KOG4567|consen  156 INASQEAGRNRLGLTRFAAERILFIYAKLNP--GIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEI-  232 (370)
T ss_pred             hhhhhHhhhcccchhhhHHHHHHHHHhhcCC--cchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHH-
Confidence            1000 00000000000   000001123344  445999999999999999743          589999999999765 


Q ss_pred             cccCC---CCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC-Cc
Q psy7828         381 YHLHQ---VSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD-SL  456 (503)
Q Consensus       381 ~~l~~---~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~-~~  456 (503)
                       +.+|   +.+...||...+.-|..+|+++|-+||.||++.+|.|..|+|+|+.++++.+||++.++||||.+|+.. ..
T Consensus       233 -rDnf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~rf  311 (370)
T KOG4567|consen  233 -RDNFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQRF  311 (370)
T ss_pred             -HHHHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhhh
Confidence             3333   333347999889999999999999999999999999999999999999999999999999999999932 57


Q ss_pred             hHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCCC
Q psy7828         457 EIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPA  497 (503)
Q Consensus       457 ~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~~  497 (503)
                      +++..+|+|++...|+.|++ .++..-+.+|++-|...+++
T Consensus       312 d~Ll~iCcsmlil~Re~il~-~DF~~nmkLLQ~yp~tdi~~  351 (370)
T KOG4567|consen  312 DFLLYICCSMLILVRERILE-GDFTVNMKLLQNYPTTDISK  351 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cchHHHHHHHhcCCCCCHHH
Confidence            89999999999999999998 56899999999988887753

>KOG1092|consensus

Probab=99.97  E-value=2.6e-30  Score=263.35  Aligned_cols=234  Identities=18%  Similarity=0.241  Sum_probs=183.3

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCC---------hHHHHHHHHccc------ccchHHHHHhhhccCCcCCC
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN---------SKYFEQLKSSVL------TYDLLIDKLTIKDVQLTASN  287 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~---------~~~Ye~L~~~~~------~~~~~~d~lI~kDv~RT~~~  287 (503)
                      ..+++++++.|||..+|+.+|++++|+.+...+         ...|-.+..+.-      ..+..+..+|.-|+.||-+ 
T Consensus       178 ~~~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~~rr~~~l~~Kr~eY~~~v~~~~~~~~~~~~~~d~~rQI~id~prm~p-  256 (484)
T KOG1092|consen  178 LEKLRKLCWNGVPSKMRPIVWKLLSGYLPPNSDRREGTLQRKRKEYVDSVVQYFDSLTNGDEDQDTWRQIPIDIPRMNP-  256 (484)
T ss_pred             HHHHHHHccCCCCccccCccceeeecccCcchhhhhhhHHHHHHHHHHHHHHHhccCCCccccCccccccccCCCCCCc-
Confidence            567999999999999999999999999886432         233444443311      1122345799999999943 


Q ss_pred             CCCCch---hhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhcc-
Q psy7828         288 DDQYFV---FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYD-  363 (503)
Q Consensus       288 d~~yf~---f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~-  363 (503)
                      +...|+   .+..+.+|+.-                           |    +..+|.+|  |.||.++++.|++.++. 
T Consensus       257 ~~~l~q~~~vq~~lerIl~i---------------------------w----airhpAsG--yvqgindlvtpf~vvfl~  303 (484)
T KOG1092|consen  257 HIPLFQQKIVQEMLERILYI---------------------------W----AIRHPASG--YVQGINDLVTPFFVVFLS  303 (484)
T ss_pred             cccchhhHHHHHHHHHHHHH---------------------------H----HHhccccc--ccccceeeechhhhhhhH
Confidence            332233   22223322211                           1    12356677  77888888877764421 


Q ss_pred             ------------------------ChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcC
Q psy7828         364 ------------------------DVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIH  419 (503)
Q Consensus       364 ------------------------dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~  419 (503)
                                              -|+|+|||+.+|++..  +.||+.. ++||++..+.++.|+++.|+.+++||+++|
T Consensus       304 e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskLLD~I--QDNYtfa-QpGIq~kV~~L~eLv~RID~~~hkHlq~~g  380 (484)
T KOG1092|consen  304 EYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKLLDGI--QDNYTFA-QPGIQRKVKNLKELVQRIDEPLHKHLQEHG  380 (484)
T ss_pred             hhcCccccccccchhhccHHHHhhhhhhHHHHHHHHHHHh--hhhhhhc-ChhHHHHHHHHHHHHHHhcHHHHHHHHHhc
Confidence                                    1489999999999998  7788875 489999999999999999999999999999


Q ss_pred             CCcccchHHHHHHHhcCCCChhhHHHHHHHHHhc-CC-chHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCC
Q psy7828         420 IHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAY-DS-LEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRY  494 (503)
Q Consensus       420 i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~-~~-~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~  494 (503)
                      ++..+|||+||.|+|.++||+.+++|+||.|++. +| .+++.+||+|+|...+++|++ +++++++.+|++|++..
T Consensus       381 veylQFAFRWmNcLLmRE~pl~~~iRlWDTY~aE~dgf~~FhvYvcAAFL~kW~~eL~e-~DFQ~~ilfLQnlPT~~  456 (484)
T KOG1092|consen  381 VEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLAEPDGFNEFHVYVCAAFLLKWSSELME-NDFQELILFLQNLPTHN  456 (484)
T ss_pred             hHHHHHHHHHHHHHHHhhccchhHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhcCCCCC
Confidence            9999999999999999999999999999999995 33 479999999999999999994 78999999999998764

>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases []

Probab=99.96  E-value=3.7e-29  Score=239.76  Aligned_cols=202  Identities=27%  Similarity=0.487  Sum_probs=150.3

Q ss_pred             cchHHHHHHHhhCCCCC--------CCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc---hhhHHHHHHHHh
Q psy7828         236 RCLRGKIWCQVLGSEAT--------PDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF---VFEDLLYQILLC  304 (503)
Q Consensus       236 ~~lR~~VW~~LLg~~~~--------~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf---~f~d~l~qvl~a  304 (503)
                      +++|+.+|+.++|..+.        ......++.........+....++|.+|+.||++++ ..+   ..+..+.+|+.+
T Consensus         1 ~~~R~~vW~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~Dv~rt~~~~-~~~~~~~~~~~l~~iL~~   79 (214)
T PF00566_consen    1 HSLRGQVWKILLGIEPNYSNNYQDEKNQWEQIESKSSNSNKLDNKIFEQIDKDVNRTFPNS-FLFKNEQNQKSLERILSA   79 (214)
T ss_dssp             -CCHHHHHHHHCTCSCHHHHHHHHHHHHHHHHHHHHHHCTSTCHTCHHHHHHHHCTSSTSC-CCSTTHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHccchhhhhhHHHHhhhhhhhhHHHHHhccccchHHHHHHHhhhhhcccc-hhhhhcchHHHHHHHHHH
Confidence            46899999999999861        001111112222222333445689999999998733 222   234455565555


Q ss_pred             hccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccC
Q psy7828         305 FSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLH  384 (503)
Q Consensus       305 fsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~  384 (503)
                      |+..                               +|..|  |+|||+.+++++++++.+|++|||||+.++...++  .
T Consensus        80 ~~~~-------------------------------~~~~~--Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~--~  124 (214)
T PF00566_consen   80 YAKY-------------------------------NPDVG--YCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLP--D  124 (214)
T ss_dssp             HHHH-------------------------------TTTTS--S-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGG--G
T ss_pred             hccc-------------------------------ccccc--ccchhhhhhhhhhhhcccccchhccccchhccccc--c
Confidence            5432                               22234  78999999999999999999999999999944443  3


Q ss_pred             CCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchH-HHHHH
Q psy7828         385 QVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEI-ISILA  463 (503)
Q Consensus       385 ~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~i-l~~vA  463 (503)
                      +..+..+|+...+..++.+++.++|+|++||++.|+++..|+.+||+|+|++.+|.+.++|||| ++. +|.++ ++++|
T Consensus       125 ~~~~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~-~g~~~~l~~~~  202 (214)
T PF00566_consen  125 FFQPNFKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLL-EGYKFFLFFIA  202 (214)
T ss_dssp             GTSTTHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHH-HCTTHHHHHHH
T ss_pred             cccccccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHH-cCCCcHHHHHH
Confidence            4443447888999999999999999999999999999999999999999999999999999999 666 44556 99999


Q ss_pred             HHHHHHhHHHhh
Q psy7828         464 VAILSFRRENLM  475 (503)
Q Consensus       464 lAIL~~~~~~LL  475 (503)
                      +||++..|++||
T Consensus       203 lail~~~~~~il  214 (214)
T PF00566_consen  203 LAILKYLRDQIL  214 (214)
T ss_dssp             HHHHHHTHHHHH
T ss_pred             HHHHHHHHHHhC
Confidence            999999999987

; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.

>KOG2223|consensus

Probab=99.94  E-value=9.1e-27  Score=237.53  Aligned_cols=239  Identities=21%  Similarity=0.324  Sum_probs=186.1

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHHHHccccc----------chHH-----HHHhhhccCCcCCC
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTY----------DLLI-----DKLTIKDVQLTASN  287 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~----------~~~~-----d~lI~kDv~RT~~~  287 (503)
                      +...+.+=|.|||+++||.||....|-..... .+.|+.+.....+.          ....     -.+|..|+.||||+
T Consensus       291 SrR~relWwQGiP~~VRGkvW~laIGNel~it-~elfd~~la~Aker~ak~~aeq~~~sa~~re~sv~~i~LDisrTfps  369 (586)
T KOG2223|consen  291 SRRVRELWWQGIPPSVRGKVWSLAIGNELNIT-YELFDIALARAKEREAKSLAEQMSNSAADREASVELIKLDISRTFPS  369 (586)
T ss_pred             hHHHHHHHHccCChhhcchhhHhhhCcccccC-HHHHHHHHHHHHHHHHHHHHhhcccchhhhhcchhheeechhccCcc
Confidence            56688889999999999999999999876532 24455443321110          0111     15899999999986


Q ss_pred             CCCCc---hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccC
Q psy7828         288 DDQYF---VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDD  364 (503)
Q Consensus       288 d~~yf---~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~d  364 (503)
                      -.-|.   |++|.++.++.||+-.                               -|..|  |+|||++|+|.|+ +-++
T Consensus       370 l~iFqk~GPy~d~L~~lL~AYt~y-------------------------------RpDvg--YVqgmSFIaAvLl-lnmd  415 (586)
T KOG2223|consen  370 LSIFQKGGPYHDDLHSLLGAYTCY-------------------------------RPDVG--YVQGMSFIAAVLL-LNMD  415 (586)
T ss_pred             eeeeccCCchHHHHHHHhhhheee-------------------------------cCccc--cccchHHHHHHHH-HcCC
Confidence            44332   5778887766665421                               13336  8899999988765 4577


Q ss_pred             hhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHH
Q psy7828         365 VISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQIL  444 (503)
Q Consensus       365 EedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vL  444 (503)
                      +.+||-+|.+|+++-+..--|.-++ +.+......|+..+++.+|+|+.||+++++.|..|...|+.++|+-.+|++...
T Consensus       416 ~~~AFiafANLLdkp~q~Aff~~d~-s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlac  494 (586)
T KOG2223|consen  416 LADAFIAFANLLDKPCQQAFFRVDH-SSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLAC  494 (586)
T ss_pred             cHHHHHHHHHHhccHHHHHHHhcCc-HHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhh
Confidence            9999999999999864321222233 455667778999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCCCCC
Q psy7828         445 YLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIPAPR  499 (503)
Q Consensus       445 rIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~~~~  499 (503)
                      ||||+|+- +|.+++|+.|++||+.+++.|+.+ ++..+.++|-.++....|++.
T Consensus       495 RIwDvy~r-dgeeFlfr~~lgIlklyepkLl~m-Df~~~~qfLtklp~dL~~eel  547 (586)
T KOG2223|consen  495 RIWDVYCR-DGEEFLFRTALGILKLYEPKLLVM-DFIHVAQFLTKLPEDLTPEEL  547 (586)
T ss_pred             hhhheeee-cchHHHHHHHHHHHHHccchHhhh-hHHHHHHHHHhCcccCCHHHH
Confidence            99999998 889999999999999999999985 588899999888876666543

>KOG2222|consensus

Probab=99.94  E-value=6.9e-27  Score=240.04  Aligned_cols=235  Identities=18%  Similarity=0.295  Sum_probs=195.7

Q ss_pred             hHHHHhhhhcC-CCcchHHHHHHHhhCCCCCCC-ChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCch----hhH
Q psy7828         223 APVAQEFLKKG-SPRCLRGKIWCQVLGSEATPD-NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFV----FED  296 (503)
Q Consensus       223 ~~~l~~l~r~G-IP~~lR~~VW~~LLg~~~~~~-~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~----f~d  296 (503)
                      ..+++++++.| ||.++|+.+|..|+|+..+.+ ....|+...+.+.+...++.++|++|+-|+.||+.-|..    .-+
T Consensus       159 tdk~~~llkeggiphslr~~lw~rlsga~~kkk~ae~sy~~ilk~~andk~~~~~qiekdllr~lpnn~cf~k~n~~gi~  238 (848)
T KOG2222|consen  159 TDKFEELLKEGGIPHSLRAFLWMRLSGALAKKKDAETSYEDILKACANDKLMIGKQIEKDLLRILPNNACFSKKNGEGIE  238 (848)
T ss_pred             hHHHHHHHHcCCCCcchhHHHHHHhhhhhhhhccccccHHHHHHHhcccccchhHHHHHHHHHhCCCcceeeCCCCcchH
Confidence            56788888876 999999999999999987643 446788888888877788889999999999998754321    112


Q ss_pred             HHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHH
Q psy7828         297 LLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFY  376 (503)
Q Consensus       297 ~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~  376 (503)
                      .+++|+.|-                         +|      +||..|  |||||..|||.|++ |.+||.|||++.+++
T Consensus       239 ~lrrilk~i-------------------------a~------ifpdig--ycqg~gviva~lll-f~~ee~afwmmaaii  284 (848)
T KOG2222|consen  239 ALRRILKCI-------------------------AF------IFPDIG--YCQGMGVIVACLLL-FCEEENAFWMMAAII  284 (848)
T ss_pred             HHHHHHhhh-------------------------ee------ecCCcc--cccCccHHHHHHHH-HhcchhHHHHHHHHH
Confidence            233322221                         12      478778  99999999998654 567899999999999


Q ss_pred             HHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCc
Q psy7828         377 LRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSL  456 (503)
Q Consensus       377 ~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~  456 (503)
                      ++.+|. +|++...-||++...+...|++.+.|.|-+.|++++|..++++..||+|+|.+.+-...++||||.||+.|| 
T Consensus       285 edilp~-nfysqtllgiqaderv~~~li~~~l~~ldeal~~~dielslitl~w~ltlf~nv~~~killriwd~~fy~g~-  362 (848)
T KOG2222|consen  285 EDILPA-NFYSQTLLGIQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFLTLFANVFHMKILLRIWDFFFYEGG-  362 (848)
T ss_pred             HHhcCc-hhhhhhHhccchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHHHHHHHHHHHHHHHHHHHhheecCc-
Confidence            999887 666655579999999999999999999999999999999999999999999999999999999999998554 


Q ss_pred             hHHHHHHHHHHHHhHHHhhCC----CCHHHHHHHHhcccCC
Q psy7828         457 EIISILAVAILSFRRENLMQV----DTLQNVEVGYEILYGR  493 (503)
Q Consensus       457 ~il~~vAlAIL~~~~~~LL~~----~~~~~i~~~L~~ls~~  493 (503)
                      -.+|.+.++||+..+.+|-..    .+.++|.+.|++||+-
T Consensus       363 i~ifql~i~ilkmkeqdi~~iaettensa~if~als~ip~~  403 (848)
T KOG2222|consen  363 INIFQLIIGILKMKEQDIKEIAETTENSADIFNALSDIPAE  403 (848)
T ss_pred             chhHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHhCCch
Confidence            577999999999999998866    7788899999988763

>KOG1093|consensus

Probab=99.93  E-value=1.3e-25  Score=235.71  Aligned_cols=244  Identities=21%  Similarity=0.327  Sum_probs=192.7

Q ss_pred             HHHHHHHhcCCC--hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCC
Q psy7828         211 ITLGEKVLNSKH--APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASND  288 (503)
Q Consensus       211 ~~~~~~vl~~~~--~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d  288 (503)
                      ..+..+++++..  ...+.+..+.|+|+.+|+.+|+.|||....+.  ..|..+-+.   .+..+|.+|+.||+|...-|
T Consensus       331 ~~~~d~Ll~g~~~k~~qI~r~a~vdvpp~~R~~iW~aLL~l~e~~~--a~y~~IDk~---Ts~~tdrqievdiprchQyd  405 (725)
T KOG1093|consen  331 MLLFDRLLDGYPKKRLQILREAYVDVPPLYRGFIWAALLQLEENHT--AFYTLIDKG---TSHSTDRQIEVDIPRCHQYD  405 (725)
T ss_pred             HHHHHHhhccchHHHHHHHHHhccCCChhHhHHHHHHHhcCccccc--hhhhhhhcC---CCCcchhhhhcccchhhhcc
Confidence            445566666543  44577788899999999999999999987754  346655443   23456789999999984221


Q ss_pred             CCCc---hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhc-cC
Q psy7828         289 DQYF---VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLY-DD  364 (503)
Q Consensus       289 ~~yf---~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~-~d  364 (503)
                       ++-   ..+..++++++|+..                        |       .|  -++|.||+-.+++||+|+. ++
T Consensus       406 -~~lsSp~~~r~lrRvLkawv~------------------------~-------s~--~fvywqgldsLa~PFl~ln~Nn  451 (725)
T KOG1093|consen  406 -ELLSSPKGHRKLRRVLKAWVT------------------------W-------SP--IFVYWQGLDSLAAPFLYLNFNN  451 (725)
T ss_pred             -cccCCHHHHHHHHHHHHHHHh------------------------c-------Cc--ceeecCCChhhhhhHHHHhcCc
Confidence             111   134455555555421                        1       01  1247889999999999885 57


Q ss_pred             hhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHH
Q psy7828         365 VISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQIL  444 (503)
Q Consensus       365 EedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vL  444 (503)
                      |.-||.|+.++.-+|+.. .|..+.+.-+...+.+|++++..|||+|++||..+|+.|.+||.+||+|+|+.+||.+.++
T Consensus       452 e~laF~~~~~fi~kycq~-fflkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil  530 (725)
T KOG1093|consen  452 ELLAFACIATFIPKYCQH-FFLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKIL  530 (725)
T ss_pred             hHHHHHHHHHHHHHHHHH-HHhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHH
Confidence            899999999999998542 3444566667888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCC
Q psy7828         445 YLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIP  496 (503)
Q Consensus       445 rIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~  496 (503)
                      .+||.++. |+..+.+++++||+...|+.||.|+ +.|...+|++++.+.|+
T Consensus       531 ~LwD~lml-~~~SFplmi~vAil~~lR~~LLa~n-fne~illf~d~pdldId  580 (725)
T KOG1093|consen  531 HLWDNLML-GHSSFPLMIGVAILIQLRDPLLACN-FNECILLFSDLPDLDID  580 (725)
T ss_pred             HHHHHHhc-CCCccHHHHHHHHHHHhhhhhhhCC-chhheeeeccCCcccHH
Confidence            99999999 7778999999999999999999975 88888999999987664

>KOG4347|consensus

Probab=99.93  E-value=3.8e-25  Score=235.85  Aligned_cols=229  Identities=16%  Similarity=0.224  Sum_probs=191.8

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCCCC-CCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc--hhhHHHH
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSEAT-PDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF--VFEDLLY  299 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~-~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf--~f~d~l~  299 (503)
                      ..+++++++.|+|.+.|+++|....|+... -.+.++|+++.+.........-+-|++|++|..|.|+.|.  +.-..+.
T Consensus       192 t~~~~Klv~~gipe~~rgeiW~l~sGav~~~l~~~Geygkll~~~~G~~~~a~eEIE~Dl~rsLpEhpA~Q~e~gi~aLR  271 (671)
T KOG4347|consen  192 TILLRKLLYNGFPEDPRGEIWYLASGAVASLLLNPGEYGKLLHSVTGKRSVATEEIEPDLGRSLPEHPAFQSEPGIAALR  271 (671)
T ss_pred             HHHHHHHHHHhcCCChHHHHHHhhhHHHHHhhcCcHHhhhhhhcccCCcccccccccCCCCCCCCcchhhhCCCchhhHH
Confidence            568999999999999999999999999765 4567999999877554334444689999999998887753  2334566


Q ss_pred             HHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHh
Q psy7828         300 QILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRY  379 (503)
Q Consensus       300 qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~  379 (503)
                      +||.||+..+                               |.-|  |||-||-+++. ++++..||+|||+++++.++|
T Consensus       272 ~vL~Aya~~N-------------------------------p~vG--YcQaMNIV~s~-lll~~~EEeafwll~~lce~~  317 (671)
T KOG4347|consen  272 RVLTAYAWSN-------------------------------PEVG--YCQAMNIVGSE-LLLFCKEEEAFWLLSKLCEIY  317 (671)
T ss_pred             HHHHhhhccC-------------------------------Cchh--HHHHHHHHHHh-hhhhhccchHHHHHHHHHHHh
Confidence            6666665422                               2335  78899865554 556778999999999999999


Q ss_pred             hcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHH
Q psy7828         380 FYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEII  459 (503)
Q Consensus       380 ~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il  459 (503)
                      .+.  |.+....|...++.+|+.|++.+.|.|+.|+..+| ...++..+||+|+|...+|++..+||-|+||. +|..++
T Consensus       318 ip~--yys~~vvGtliDQ~vfe~lve~~lP~l~~~~~~l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~-eG~rvl  393 (671)
T KOG4347|consen  318 IPD--YYSKTVVGTLIDQSVFEELVEDTLPVLGEHLAVLG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFY-EGPRVL  393 (671)
T ss_pred             ccc--ccchhhhhhHHHHHHHHHHHHHhhhHHHHHhhhhc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhh-cccHHH
Confidence            874  55544578888899999999999999999999999 88999999999999999999999999999998 889999


Q ss_pred             HHHHHHHHHHhHHHhhCCCCHHHHHHHHhc
Q psy7828         460 SILAVAILSFRRENLMQVDTLQNVEVGYEI  489 (503)
Q Consensus       460 ~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~  489 (503)
                      |.||+||++.+.+.|+++++..+++.++++
T Consensus       394 FqiaLail~~N~~~il~~~dDge~~~vl~~  423 (671)
T KOG4347|consen  394 FQIALAILKQNAERILSATDDGEAMMVLGN  423 (671)
T ss_pred             HHHHHHHHHhhHHHhcccCCchHHHHHHHH
Confidence            999999999999999999999999988763

>KOG4436|consensus

Probab=99.88  E-value=8.2e-22  Score=213.34  Aligned_cols=233  Identities=17%  Similarity=0.274  Sum_probs=175.7

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCC------CCC--CChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchh
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSE------ATP--DNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVF  294 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~------~~~--~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f  294 (503)
                      ...+-..++.|||.+-||+||.++.--.      +..  ...--|+.|.++...+    ...|..|+.||||+|.+|   
T Consensus       567 ~ed~~~~l~~gvprsrrgeiwtflA~q~~~~~~l~~~kr~~~~p~~~llkqLte~----qhAi~idlgrtfp~h~~~---  639 (948)
T KOG4436|consen  567 MEDLHSALRTGVPRSRRGEIWTFLAEQHSLNHALPDKKRPPDFPYKELLKQLTEQ----QHAILIDLGRTFPTHPYF---  639 (948)
T ss_pred             HHHHHHHHHccCchhhhHHHHHHHHHHHHHhccCCcccCCCCCChHHHHHHHHHH----HHHHHHhhccccCCCHHH---
Confidence            4457778999999999999999987332      111  1223456666554322    347889999999998754   


Q ss_pred             hHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHH
Q psy7828         295 EDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA  374 (503)
Q Consensus       295 ~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~  374 (503)
                      .+.++-.      ..+..+.++.++                  .+-|.-|  ||||.+++++.|+ +.++|+.||-++..
T Consensus       640 ~~qlg~g------qlsl~n~Lkays------------------lld~e~g--ycqg~~fv~gvll-lh~~e~~afellk~  692 (948)
T KOG4436|consen  640 SDQLGLG------QLSLFNLLKAYS------------------LLDPEVG--YCQGLSFVAGVLL-LHMSEENAFELLKF  692 (948)
T ss_pred             Hhhcccc------HHHHHHHHHHhc------------------ccCcccc--ccCcchhhhhhhH-hhcchhhHHHHHHH
Confidence            2322210      012223332221                  0112224  8899998877655 45779999999999


Q ss_pred             HHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828         375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD  454 (503)
Q Consensus       375 L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~  454 (503)
                      ||-+-..+-.|..+. ..++..+..++++++.+.|+||+|++++.|.|..||.+||+|+|+..||...+-|++|.++. .
T Consensus       693 LM~~r~~r~qy~pdm-~~lq~qmyqLsrl~hd~hrdlyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~fl-q  770 (948)
T KOG4436|consen  693 LMFDRGMRKQYRPDM-KKLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFL-Q  770 (948)
T ss_pred             HHHHHhhHhhhchHH-HHHHHHHHHHHHHHHHHhHHHHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHh-h
Confidence            987654454565543 34455567899999999999999999999999999999999999999999999999999999 7


Q ss_pred             CchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhccc
Q psy7828         455 SLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILY  491 (503)
Q Consensus       455 ~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls  491 (503)
                      |.+++|-+|+++|..++..|++++++++|..+++++-
T Consensus       771 ~tevifK~a~~llsv~k~~l~e~dn~e~i~d~~k~~~  807 (948)
T KOG4436|consen  771 GTEVIFKVALSLLSVHKQLLLEKDNFEEIVDFLKTTL  807 (948)
T ss_pred             ccchhhhhHHHHHHhhHHHHHhhhhHHHHHHHHHHhh
Confidence            7899999999999999999999999999999998753

>KOG1102|consensus

Probab=99.87  E-value=7.1e-22  Score=208.21  Aligned_cols=237  Identities=16%  Similarity=0.278  Sum_probs=175.4

Q ss_pred             CCChHHHHhhhhcCCCcchHHHHHHHhhCCCCCCC---ChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhH
Q psy7828         220 SKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPD---NSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFED  296 (503)
Q Consensus       220 ~~~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~---~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d  296 (503)
                      ..+..++...+..|||.++|+.+|..+++......   ....|......   ...-..++| +|+.||++.+..   |..
T Consensus       132 ~~~~~~l~~~~~~gip~~~r~~~W~l~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~d~~Rt~~~~~~---f~~  204 (397)
T KOG1102|consen  132 LRRPLKLSRRVLVGIPDELRGLVWQLLLYAVEESLFDSLDELYRLQLDE---PEPHESEII-RDLSRTFPAHLL---FRK  204 (397)
T ss_pred             cccHHHHHHHhhccccHHHHHHHHHHhcccHhhhhhhhHHHHHHHhhcc---CCCchhHHH-hhccCcCcchhh---hhh
Confidence            34467888999999999999999999999833211   11222222111   111223456 999999877543   222


Q ss_pred             HHHHHHHhhccc-hhhhhhhhccCCCCCCcccccccccccccccc-CCCCCccccchHHHHHHHHHhccChhHHHHHHHH
Q psy7828         297 LLYQILLCFSRD-TEILSIFEHSSASPLYGPLKNKNTNTENLVVY-PPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRA  374 (503)
Q Consensus       297 ~l~qvl~afsrd-~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~-p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~  374 (503)
                      ..+       .. .++.+.+.        +|           .+| |..|  |+|||..+++|++..+ .||+|||+++.
T Consensus       205 ~~~-------~~q~sl~~vl~--------a~-----------s~~~~~~g--y~q~m~~~a~~ll~~~-~ee~af~~lv~  255 (397)
T KOG1102|consen  205 RYG-------VGQRSLYNVLK--------AY-----------SLYDPEVG--YCQGMSSIAAPLLLYL-PEEEAFPLLVK  255 (397)
T ss_pred             hcC-------cccccccccch--------hh-----------cccCCCcc--cccchhhHhhhhhccC-chhhhhhhhhh
Confidence            111       11 11111111        11           123 3346  7889999999876654 49999999999


Q ss_pred             HHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC
Q psy7828         375 FYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD  454 (503)
Q Consensus       375 L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~  454 (503)
                      +|..+-  .+.+.....|+......++.+++...|+++.|+...++...+|+.+||+|+|+..+|++.++||||.++. +
T Consensus       256 l~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~-~  332 (397)
T KOG1102|consen  256 LMKNYG--LDLLSPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFV-E  332 (397)
T ss_pred             hhhccc--hhcccccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHH-h
Confidence            999884  3333333478888899999999999999999999999999999999999999999999999999999999 5


Q ss_pred             CchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCCCC
Q psy7828         455 SLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRYIP  496 (503)
Q Consensus       455 ~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~~~  496 (503)
                      |..+++.+++++++...+.+++.+ ++.++.++.+-......
T Consensus       333 g~~i~~~~~~~l~~~~~~~~~~~~-~e~~~~~l~~~~~~~~~  373 (397)
T KOG1102|consen  333 GVSILFRFSLALLKHKADDLLDLD-FESLLSYLRVDLPKSYD  373 (397)
T ss_pred             chHHHHHHHHHHhhhhhHHHhhcc-HHHHHHHHhcccHhhcC
Confidence            589999999999999999999977 88888888765554443

>KOG2224|consensus

Probab=99.77  E-value=1.8e-18  Score=176.78  Aligned_cols=236  Identities=15%  Similarity=0.257  Sum_probs=164.3

Q ss_pred             HHHhhh-hcCCCcchHHHHHHHhhCCCCCCC-----------ChHHHHHHHHcccccchH---------HHHHhhhccCC
Q psy7828         225 VAQEFL-KKGSPRCLRGKIWCQVLGSEATPD-----------NSKYFEQLKSSVLTYDLL---------IDKLTIKDVQL  283 (503)
Q Consensus       225 ~l~~l~-r~GIP~~lR~~VW~~LLg~~~~~~-----------~~~~Ye~L~~~~~~~~~~---------~d~lI~kDv~R  283 (503)
                      ++++.+ -+||-.++|++||.+||..+.-..           .+..|++..++..-.-++         ++=.++|||-|
T Consensus       426 ~lrk~iffggid~sir~evwpfllk~ys~est~edr~al~~~krkey~eiqqkrlysmspeeh~~fwknvq~tvdkdvvr  505 (781)
T KOG2224|consen  426 KLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKRKEYEEIQQKRLYSMSPEEHIAFWKNVQFTVDKDVVR  505 (781)
T ss_pred             HhhhhheeccchhhhhcchhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHhheEEEEecceee
Confidence            455544 478999999999999998865421           245676665543211111         11135799999


Q ss_pred             cCCCCCCCc-----hhhHHHHHHHHhhccchhhhhhhhccCCCCCCcccccccccccccccc--------CCCCCccccc
Q psy7828         284 TASNDDQYF-----VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVY--------PPSGIIPFHG  350 (503)
Q Consensus       284 T~~~d~~yf-----~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~--------p~~G~i~~qG  350 (503)
                      |-.|+. ||     |.-+..++|++.|+..+..+++            .+|...++. .+++        --|-+--+||
T Consensus       506 tdrnn~-ff~gddnpn~e~mk~illn~avyn~~m~y------------sqgmsdlla-pvlcevqnesetfwcfvglmqg  571 (781)
T KOG2224|consen  506 TDRNNP-FFCGDDNPNTESMKNILLNFAVYNPAMGY------------SQGMSDLLA-PVLCEVQNESETFWCFVGLMQG  571 (781)
T ss_pred             ccCCCC-cccCCCCCcHHHHHHHHHhheeecccccc------------cccchhhcc-hhhhhhccccchhhhhhhhhcc
Confidence            976654 45     3445678888888776554432            222211110 0110        0110113589


Q ss_pred             hHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCc--ccchHH
Q psy7828         351 FTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHP--IKIVFK  428 (503)
Q Consensus       351 m~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~--~~~a~~  428 (503)
                      |+++|||++.-..||.|+||||+.+|.+-++- ..-.+  ..+...+.-++.|++...|..|+||+++|-+.  .+|+.+
T Consensus       572 msdlvapilaevldesdtfwcfvglmqna~fv-~sp~d--~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchr  648 (781)
T KOG2224|consen  572 MSDLVAPILAEVLDESDTFWCFVGLMQNAFFV-CSPRD--EDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHR  648 (781)
T ss_pred             chhhhhhHHHhhhccccchhhhhhhhcceEEE-eCCcc--hhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHH
Confidence            99999999988889999999999999875432 01111  23344456789999999999999999998654  579999


Q ss_pred             HHHHHhcCCCChhhHHHHHHHHHhcC-CchHHHHHHHHHHHHhHHHhhCC
Q psy7828         429 WIMRCFSGHLPPDQILYLWDLILAYD-SLEIISILAVAILSFRRENLMQV  477 (503)
Q Consensus       429 WfltlFs~~lp~~~vLrIWD~~l~~~-~~~il~~vAlAIL~~~~~~LL~~  477 (503)
                      |++.||.++||...++|||...+++- ...++.++|+||+..+.+.+++-
T Consensus       649 wlllcfkref~ea~airiweacwa~y~tdyfhlficlaiiaiy~ddvi~q  698 (781)
T KOG2224|consen  649 WLLLCFKREFPEAEAIRIWEACWAHYLTDYFHLFICLAIIAIYADDVIAQ  698 (781)
T ss_pred             HHHHHhhhcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHh
Confidence            99999999999999999999999832 34689999999999999988753

>KOG2221|consensus

Probab=99.67  E-value=3.4e-17  Score=155.33  Aligned_cols=174  Identities=17%  Similarity=0.258  Sum_probs=128.5

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCCCC-CCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhHHHHHH
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSEAT-PDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQI  301 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~-~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d~l~qv  301 (503)
                      .+.++..|++|||+++|+..|+.|.|+... ..++..|+.+.......  ..-+-|++|++|.||+|..| ......++ 
T Consensus        93 ~~~ir~rcrkgippslr~Raw~ylsGa~~~~~~np~~~~~~~~~pG~p--~t~e~i~kdl~rqfp~hemf-~s~~k~gk-  168 (267)
T KOG2221|consen   93 QKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPPKNPVVFDELGPAPGDP--KTAEGIHKDLHRQFPFHEMF-GSSGKTGK-  168 (267)
T ss_pred             cccccchhhcCCCcccchhHHHhhcCCCCCCCCCcchhhhccCCCCCC--cchhhhccccccCCCccccc-ccccccch-
Confidence            446888999999999999999999999876 45778899887664432  23357999999998887653 22221221 


Q ss_pred             HHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhc
Q psy7828         302 LLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFY  381 (503)
Q Consensus       302 l~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~  381 (503)
                             ++..++++.++                  ...|..|  |||+=.-|+|.++ +-+.++||||||+.++++|.+
T Consensus       169 -------qelfr~lka~t------------------i~~pe~g--~cq~qapiaa~ll-mhmp~rdaf~~~vqicekylq  220 (267)
T KOG2221|consen  169 -------QELFRVLKAYT------------------IYKPEEG--YCQAQAPIAAVLL-MHMPARDAFWCFVQICEKYLQ  220 (267)
T ss_pred             -------HHHHHHHHHHH------------------HhCchhh--hhhhhchHHHHHH-hcccHHHHHHHHHHHHHHHcc
Confidence                   33333333222                  0124446  7788777887654 556789999999999999976


Q ss_pred             ccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHH
Q psy7828         382 HLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWI  430 (503)
Q Consensus       382 ~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~Wf  430 (503)
                      .  |.++....|+.+-.+++.|+++.+|-.|.||...+++|.+|...||
T Consensus       221 g--y~~sgleaiq~dg~il~~Llkk~~~p~~rH~~~~kvdp~lym~ewF  267 (267)
T KOG2221|consen  221 G--YYSSGLEAIQNDGGILEGLLKKASPPPYRHLGGDKVDPLLYMTEWF  267 (267)
T ss_pred             c--ccccchhhhhcccHHHHHHHHhcCCCCCcccccCCCCHHHhhhccC
Confidence            4  4443334555566799999999999999999999999999999997

>KOG2197|consensus

Probab=99.66  E-value=1.9e-16  Score=170.49  Aligned_cols=218  Identities=18%  Similarity=0.233  Sum_probs=161.0

Q ss_pred             hhhhcCCCcchHHHHHHHhhCCCCCCCCh----------HHHHHHHHccccc----ch------HHHHHhhhccCCcCCC
Q psy7828         228 EFLKKGSPRCLRGKIWCQVLGSEATPDNS----------KYFEQLKSSVLTY----DL------LIDKLTIKDVQLTASN  287 (503)
Q Consensus       228 ~l~r~GIP~~lR~~VW~~LLg~~~~~~~~----------~~Ye~L~~~~~~~----~~------~~d~lI~kDv~RT~~~  287 (503)
                      ...+.|+=..+|+.+|+.+.++.+.....          ..|..++.+....    +.      .....|.+|+.||-..
T Consensus       172 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~  251 (488)
T KOG2197|consen  172 RIFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKLTDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRS  251 (488)
T ss_pred             eecccccccchhhhhhhhhhcccCcccccccccccccccccHhhhhhhheeccccccccccchhhhhhhhhhhccccchh
Confidence            55556675599999999999998764322          1466666553211    11      2236799999999544


Q ss_pred             CCCCchhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhH
Q psy7828         288 DDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVIS  367 (503)
Q Consensus       288 d~~yf~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEed  367 (503)
                      +..| .+.+.-         +.+.+..+..       .|          ....+..|  |+|||+++.+|++.++.+|.+
T Consensus       252 ~~~~-~~~~n~---------~~~~l~~iL~-------ty----------~~~~~d~G--Y~QgmSDllspi~~v~~de~~  302 (488)
T KOG2197|consen  252 LEFY-EGEENP---------HLARLVDILL-------TY----------AVYDFDLG--YCQGMSDLLSPILIVMEDEVE  302 (488)
T ss_pred             hhhh-hccccc---------CHHHHHHHHh-------hc----------ccccCccc--cccCchhhcCcceeeecCchH
Confidence            3322 111110         0111111110       11          11224446  889999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHH
Q psy7828         368 LYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLW  447 (503)
Q Consensus       368 aFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIW  447 (503)
                      |||||+.+|++.  +-+|-.+. .|+......+..+++..+|.+++||++.+.....++++|++..|-++|.++.++++|
T Consensus       303 aFwcFv~fm~~~--~~nF~~d~-~~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LW  379 (488)
T KOG2197|consen  303 AFWCFVGFMDRL--RHNFRIDQ-SGMQTQLAQLSSLIQELDPRLYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLW  379 (488)
T ss_pred             HHHHHHHHHHHH--hhcCcccc-ccHHHHhhhhhhhccccCHHHHhhccccCCCccceeeehhhcccccccccccHHHHH
Confidence            999999999996  32454443 688888888889999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcC-CchHHHHHHHHHHHHhHHHhhCC
Q psy7828         448 DLILAYD-SLEIISILAVAILSFRRENLMQV  477 (503)
Q Consensus       448 D~~l~~~-~~~il~~vAlAIL~~~~~~LL~~  477 (503)
                      .+++... ...+.++++.|++......|+..
T Consensus       380 Evlw~~~~~~~f~~~~~~~~l~~~~~~l~~~  410 (488)
T KOG2197|consen  380 EVLWTDLPSPHFHLYVAPAILNKDPQTLMEQ  410 (488)
T ss_pred             HHHHhcCccchHHHHHHHhhhhcchHHHHhc
Confidence            9999843 56899999999999988888864

>KOG3636|consensus

Probab=99.62  E-value=4.1e-15  Score=153.09  Aligned_cols=216  Identities=23%  Similarity=0.301  Sum_probs=160.1

Q ss_pred             CCCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhHHHHHHHHhhccchhhh
Q psy7828         233 GSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEIL  312 (503)
Q Consensus       233 GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d~l~qvl~afsrd~~vl  312 (503)
                      |=|.++    |+.+||+.-+......|+++      ++.+.+.+|++|..|-. + .---+.+|... ++...   .+++
T Consensus        36 G~~~~~----W~~~L~V~~K~d~l~~wd~i------ydLp~Q~~lr~DC~~~~-d-~l~n~ee~~v~-vv~dl---ES~i   99 (669)
T KOG3636|consen   36 GNDKSD----WMRLLGVSMKPNPLDDWDQI------YDLPNQCALRNDCRKLA-D-GLKNKEEDKVP-VVSDL---ESFI   99 (669)
T ss_pred             CCCHHH----HHHHhcccCCCCchhhHHHH------hCCchhhHHHHHHHHHH-h-hcCCchhhccc-hhHhh---hhHh
Confidence            557666    99999998887666677776      56667778889987642 1 00001111110 00000   0111


Q ss_pred             hhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHh
Q psy7828         313 SIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQG  392 (503)
Q Consensus       313 ~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~G  392 (503)
                                 ..|.+.+.      ..|-     +--|+..++-||+.+-.+-.+.|.||.+++++|.|+. +.   |.|
T Consensus       100 -----------TfYCK~Rn------~~Y~-----~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkd-cr---pkg  153 (669)
T KOG3636|consen  100 -----------TFYCKKRN------MDYI-----KDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKD-CR---PKG  153 (669)
T ss_pred             -----------hhhhhccC------Cccc-----ccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCC-CC---CCC
Confidence                       12222110      0121     1238999999999988888999999999999999873 32   223


Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHH
Q psy7828         393 ILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRE  472 (503)
Q Consensus       393 i~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~  472 (503)
                        +...+|+.||+.|+|+|++||+...|.|.+|+..||-++|+.+.+.+.+.-+||.|+-...+.++|++|+-||..-++
T Consensus       154 --~~Fh~FRLLlqYHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF~vffLaliiLiNake  231 (669)
T KOG3636|consen  154 --QIFHLFRLLLQYHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPFLVFFLALIILINAKE  231 (669)
T ss_pred             --ccchHHHHHHHhcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCceehHHHHHHHhcccHH
Confidence              346789999999999999999999999999999999999999999999999999999977888999999999999999


Q ss_pred             HhhCC--CCHHHHHHHHhcccC
Q psy7828         473 NLMQV--DTLQNVEVGYEILYG  492 (503)
Q Consensus       473 ~LL~~--~~~~~i~~~L~~ls~  492 (503)
                      +||+.  ++-+++..+|++.+.
T Consensus       232 ~ILq~~sdsKEe~ikfLenmp~  253 (669)
T KOG3636|consen  232 EILQVKSDSKEEAIKFLENMPA  253 (669)
T ss_pred             HHhhhccccHHHHHHHHHcCch
Confidence            99976  556899999987653

>KOG2595|consensus

Probab=99.61  E-value=1.5e-14  Score=145.22  Aligned_cols=234  Identities=12%  Similarity=0.174  Sum_probs=154.5

Q ss_pred             ChHHHHhhhhc--C-CCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCchhhHHH
Q psy7828         222 HAPVAQEFLKK--G-SPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYFVFEDLL  298 (503)
Q Consensus       222 ~~~~l~~l~r~--G-IP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf~f~d~l  298 (503)
                      +.+.++.+...  | +-+++|..+|..|+|..-...+...+....+.     ..-..|+..|++|++..   |-|..+..
T Consensus        47 dv~~Lr~i~l~p~Glv~dslRk~vWp~L~~~~~n~~~~~~~~~~~q~-----hkd~nQV~LDv~RSl~r---fppg~p~~  118 (395)
T KOG2595|consen   47 DVDALRYIGLSPGGLVNDSLRKDVWPELLALNINHLDATSTLTPVQK-----HKDYNQVILDVERSLGR---FPPGIPKE  118 (395)
T ss_pred             cHHHHHHhccCCCccccHHHHHHHHHHHhccccCCCcccccCChhhh-----CcccceEEEehhhhhcc---CCCCCCHH
Confidence            35556665554  3 57899999999999987665432222222221     11125789999999854   21111111


Q ss_pred             HHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHH
Q psy7828         299 YQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLR  378 (503)
Q Consensus       299 ~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~  378 (503)
                      .+..+    ..++...+.        ..+          ..||.-  .||||+.+||..|++++. |.+|+-+..++-.-
T Consensus       119 ~R~~L----q~qL~~LI~--------rVl----------~~yP~L--~YYQGyHDI~~tfLLv~g-E~~Al~l~E~L~~~  173 (395)
T KOG2595|consen  119 LRLQL----QKQLTELIL--------RVL----------RKYPTL--NYYQGYHDIVVTFLLVVG-ELEALSLMEELSTL  173 (395)
T ss_pred             HHHHH----HHHHHHHHH--------HHH----------HHCCCc--chhcchhHHHHHHHHhhh-hHhhhHHHHHHHHH
Confidence            11000    011111111        000          114432  399999999999998876 78888766666543


Q ss_pred             hhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCC-ChhhHHHHHHHHHhcCCch
Q psy7828         379 YFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHL-PPDQILYLWDLILAYDSLE  457 (503)
Q Consensus       379 ~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~l-p~~~vLrIWD~~l~~~~~~  457 (503)
                      ++ + .|+...-.+..+.+..+--+++..+|+||+.|++-.+.+ +|+..|.+|.|+..+ +...++|++|.|++.... 
T Consensus       174 ~l-r-dfM~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas~pl-  249 (395)
T KOG2595|consen  174 HL-R-DFMLPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLASHPL-  249 (395)
T ss_pred             HH-H-HHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhcCcc-
Confidence            33 2 233322245666777888899999999999999999876 499999999999998 999999999999995544 


Q ss_pred             HHHHHHHHHHHHhHHHhhCCCCH-HHHHHHHhcccC
Q psy7828         458 IISILAVAILSFRRENLMQVDTL-QNVEVGYEILYG  492 (503)
Q Consensus       458 il~~vAlAIL~~~~~~LL~~~~~-~~i~~~L~~ls~  492 (503)
                      .-.+++++++..++.+|++|.-. .-+-..|+.++.
T Consensus       250 ~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq  285 (395)
T KOG2595|consen  250 LPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQ  285 (395)
T ss_pred             hhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCcc
Confidence            77788999999999999987422 334455555543

>KOG1091|consensus

Probab=99.50  E-value=2.5e-13  Score=143.80  Aligned_cols=179  Identities=20%  Similarity=0.322  Sum_probs=124.5

Q ss_pred             HHhhhccCCcCCCCCCCchh---hHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccch
Q psy7828         275 KLTIKDVQLTASNDDQYFVF---EDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGF  351 (503)
Q Consensus       275 ~lI~kDv~RT~~~d~~yf~f---~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm  351 (503)
                      +.|..|+.||||.+..||+-   +..+.+||.+|.++.+-                               .|  |=|||
T Consensus       106 ~~i~qDvsRtfPe~~~fFqs~~~q~mLr~iLl~~~lehp~-------------------------------i~--YrQGM  152 (625)
T KOG1091|consen  106 KTIDQDVSRTFPEHSLFFQSPEVQGMLRRILLLYALEHPE-------------------------------IG--YRQGM  152 (625)
T ss_pred             HhhcchhhccCcchhhhhcCchhhHHHHHHHHHHHhhchh-------------------------------hh--HHhhh
Confidence            68999999999998777764   34577777777664321                               11  44688


Q ss_pred             HHHHHHHHHhccCh------------------------------hHHH--HHHHHHHH--HhhcccC-------------
Q psy7828         352 TMYATPFCYLYDDV------------------------------ISLY--FTFRAFYL--RYFYHLH-------------  384 (503)
Q Consensus       352 ~~iaapLl~l~~dE------------------------------edaF--w~f~~L~~--~~~~~l~-------------  384 (503)
                      -.+.||++|+..-.                              .+++  -+|..+|.  .|+...+             
T Consensus       153 HElLAPl~fVl~~D~q~l~h~se~~~~~l~f~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~d  232 (625)
T KOG1091|consen  153 HELLAPLLFVLHVDNQALLHVSESLFDKLGFEERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHD  232 (625)
T ss_pred             hhhhhhhhhheehhHHHHHHHHHhhhhhcCcchhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcC
Confidence            88888877663211                              2222  23333332  2221100             


Q ss_pred             -C--CCcChHhHHH---HHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCc--
Q psy7828         385 -Q--VSSNEQGILS---LCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSL--  456 (503)
Q Consensus       385 -~--~~~~~~Gi~~---l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~--  456 (503)
                       |  .....+|+..   .+..+..++..+|+.|+.||.+.||.|..|..+|.-.+|.++||+..+|.+||.++.++++  
T Consensus       233 ay~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr~  312 (625)
T KOG1091|consen  233 AYVMFDALMPGLPPVFEANFAQYHLLAKVDKSLHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPRG  312 (625)
T ss_pred             cccchhhhcccchhHHHHhhhhhhhhhhccHHHHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCchH
Confidence             1  0111134333   3446789999999999999999999999999999999999999999999999944444654  


Q ss_pred             hHHHHHHHHHHHHhHHHhhCCCCHHHHHHHH
Q psy7828         457 EIISILAVAILSFRRENLMQVDTLQNVEVGY  487 (503)
Q Consensus       457 ~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L  487 (503)
                      .++.++++|+|...++.|+..++.. .++.+
T Consensus       313 ~Lv~~m~VsmLL~IRd~Llss~~~t-cL~~L  342 (625)
T KOG1091|consen  313 ILVACMFVSMLLYIRDSLLSSEYQT-CLQYL  342 (625)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchh-HHHHH
Confidence            4677888999999999999877655 44444

>KOG4436|consensus

Probab=99.35  E-value=4.4e-12  Score=138.61  Aligned_cols=239  Identities=16%  Similarity=0.145  Sum_probs=166.8

Q ss_pred             hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCC--hHHHHHHHHcccccch-HHHHHhhhccCCcCCCCCCCchhhHHHH
Q psy7828         223 APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN--SKYFEQLKSSVLTYDL-LIDKLTIKDVQLTASNDDQYFVFEDLLY  299 (503)
Q Consensus       223 ~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~--~~~Ye~L~~~~~~~~~-~~d~lI~kDv~RT~~~d~~yf~f~d~l~  299 (503)
                      ...++.++.+|+|+..|-.+|+.++.+....+.  ...|.++.....+.+. ..-..|.+|+.||.+.|.. |.-.+..-
T Consensus       174 ~~~l~e~Ve~~~p~~frli~~qlLssatd~~q~~I~e~~sdl~~~s~~~Ek~~~~~~Irrdi~~~~~eh~~-fke~~s~~  252 (948)
T KOG4436|consen  174 LHKLKELVEGGIPMHFRLIRWQLLSSATDREQALIFEDYSDLAPCSSQQEKELHIGIIRRDIERTYPEHYF-FKEQSSTV  252 (948)
T ss_pred             hhhhHHHHhcCCchHHHHHHHHHhcccccchhhHHHHHHHHHhhhcchhhhhHHHHHHHHHhhccCcceee-eccCccCC
Confidence            456999999999999999999999988877643  2556666665444332 1224899999999887653 32222110


Q ss_pred             HHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHh
Q psy7828         300 QILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRY  379 (503)
Q Consensus       300 qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~  379 (503)
                      --...|.. .-+.+.++.++        .           ..- -++++||-+.+++- +.+.+++|.+|-+++.+|..|
T Consensus       253 ~~~~~~~~-d~LfN~~K~~~--------~-----------~~~-E~ifsqGs~~m~Gl-l~l~~~~E~assv~~~lm~~~  310 (948)
T KOG4436|consen  253 CSDIRFAQ-DQLFNVAKAYS--------T-----------KDL-EVIFSQGSAFMVGL-LLLQMPVEEASSVKVQLMILY  310 (948)
T ss_pred             cchhHHHH-HHHHHHHHHHh--------h-----------hhh-hhhhccchHHHHHH-HHhcCcHHHHHHHHHHHHHhh
Confidence            00000000 00111121111        0           000 12478898888875 455678999999999999988


Q ss_pred             hcccCCCCcChHhHHH-HHHHHHHHHHhhch-HHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCch
Q psy7828         380 FYHLHQVSSNEQGILS-LCILFHRLLQRYEP-QLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLE  457 (503)
Q Consensus       380 ~~~l~~~~~~~~Gi~~-l~~~fe~LL~~~~P-~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~  457 (503)
                        ++...+..+..... ....++...+...| .++.||.+.+++.++|+..||++.|.+.+|+...-|+-|.+.+ +|..
T Consensus       311 --rl~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~-egll  387 (948)
T KOG4436|consen  311 --RLRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSS-EGLL  387 (948)
T ss_pred             --cccccCCcccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHHHHHHhhcccCchhhcccccccccc-ccHH
Confidence              76666644434444 34578999999999 9999999999999999999999999999999999999999998 8888


Q ss_pred             HHHHHHHHHH-HHhHHHhhCCCCHHHHHHHHh
Q psy7828         458 IISILAVAIL-SFRRENLMQVDTLQNVEVGYE  488 (503)
Q Consensus       458 il~~vAlAIL-~~~~~~LL~~~~~~~i~~~L~  488 (503)
                      ..|++.+|++ ..+.-.+++ .++++....++
T Consensus       388 k~fr~~ia~~~~~~d~~~~s-~D~EG~~~~~q  418 (948)
T KOG4436|consen  388 KRFRDSIAYLHQLRDIELES-LDMEGMLSYFQ  418 (948)
T ss_pred             HHHhhhHHHHHHHhhhhhhc-cCccccccchh
Confidence            8899999999 444444444 44666554444

>KOG2801|consensus

Probab=97.76  E-value=0.00022  Score=71.45  Aligned_cols=232  Identities=16%  Similarity=0.219  Sum_probs=133.7

Q ss_pred             hHHHHhhhhcCC---CcchHHHHHHHhhCCCCCC---CChHHHHHHHHc-ccccchHHHHHhh-hccCCcCCCCCCCc--
Q psy7828         223 APVAQEFLKKGS---PRCLRGKIWCQVLGSEATP---DNSKYFEQLKSS-VLTYDLLIDKLTI-KDVQLTASNDDQYF--  292 (503)
Q Consensus       223 ~~~l~~l~r~GI---P~~lR~~VW~~LLg~~~~~---~~~~~Ye~L~~~-~~~~~~~~d~lI~-kDv~RT~~~d~~yf--  292 (503)
                      ..+++++.|.|.   ...+||.|++.+..-.+..   .+...|.....+ +..+.+.+-.+-+ .|-...    +.|.  
T Consensus        32 lqelkqlarqgywaqshalrgkvyqrlirdipcrtvtpdasvysdivgkivgkhsssclplpefvdntqv----psycln  107 (559)
T KOG2801|consen   32 LQELKQLARQGYWAQSHALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGKHSSSCLPLPEFVDNTQV----PSYCLN  107 (559)
T ss_pred             HHHHHHHHhcchHHhhhhhhhHHHHHHHhcCCccccCCchhHHHHHHHHHhccCCcccccchhhcccCcC----chhhhc
Confidence            557899999996   6679999999998766642   244566655443 2222211000000 000000    0111  


Q ss_pred             -hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCcccc-chHHHHHHHHHhccChhHHHH
Q psy7828         293 -VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFH-GFTMYATPFCYLYDDVISLYF  370 (503)
Q Consensus       293 -~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~q-Gm~~iaapLl~l~~dEedaFw  370 (503)
                       ..+..++.|++|.+.                               .+|..   .|+ .+-.++|.++-..-||+++|-
T Consensus       108 argegavrkilKOGan-------------------------------qfpdi---sfcpalpavvalllhysideaecfe  153 (559)
T KOG2801|consen  108 ARGEGAVRKILLCLAN-------------------------------QFPDI---SFCPALPAVVALLLHYSIDEAECFE  153 (559)
T ss_pred             CcCchhHHHHHHHHhc-------------------------------cCCCc---ccCcchHHHHHHHHHhcccHHHHHH
Confidence             012223333333321                               12322   233 566667766555568888776


Q ss_pred             HHHHHHHHhhcccCCCC-cChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHH
Q psy7828         371 TFRAFYLRYFYHLHQVS-SNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDL  449 (503)
Q Consensus       371 ~f~~L~~~~~~~l~~~~-~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~  449 (503)
                      --+.++.-.-+.-..+. ++ -.+.+-|..|-.|+.++...-++-+....-+.......|---+| +++|+-..-|++|.
T Consensus       154 kacrilacndpgrrlidqsf-lafesscmtfgdlvnkycqaahklmvavsedvlqvyadwqrwlf-gelplcyfarvfdv  231 (559)
T KOG2801|consen  154 KACRILACNDPGRRLIDQSF-LAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLF-GELPLCYFARVFDV  231 (559)
T ss_pred             HhheeeeecCcchhhhhhHH-HHHHhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-ccchHHHHHHHhhh
Confidence            54444321101000111 11 23445577888899988877777666655555556667776666 78999999999999


Q ss_pred             HHhcCCchHHHHHHHHHHHHhHHH----hhCCCCH-HHHHHHHhcccCCCC
Q psy7828         450 ILAYDSLEIISILAVAILSFRREN----LMQVDTL-QNVEVGYEILYGRYI  495 (503)
Q Consensus       450 ~l~~~~~~il~~vAlAIL~~~~~~----LL~~~~~-~~i~~~L~~ls~~~~  495 (503)
                      |+. +|.+++.++|+||+++..+.    -++.++. ++|-.+..+|..--.
T Consensus       232 flv-egykvlyrvalailkffhkvragqplesdsvkqdirtfvrdiaktvs  281 (559)
T KOG2801|consen  232 FLV-EGYKVLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVS  281 (559)
T ss_pred             eee-cchHHHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhhCC
Confidence            999 88999999999999987653    2333333 567677766654433

>PF14961 BROMI: Broad-minded protein

Probab=97.32  E-value=0.0017  Score=75.62  Aligned_cols=142  Identities=20%  Similarity=0.322  Sum_probs=106.6

Q ss_pred             cccchHHHHHHHHHhc-cChhHHHHHHHHH---HH-Hh--hcccCCCCcCh-----HhHHHH----HHHHHHHHHhhchH
Q psy7828         347 PFHGFTMYATPFCYLY-DDVISLYFTFRAF---YL-RY--FYHLHQVSSNE-----QGILSL----CILFHRLLQRYEPQ  410 (503)
Q Consensus       347 ~~qGm~~iaapLl~l~-~dEedaFw~f~~L---~~-~~--~~~l~~~~~~~-----~Gi~~l----~~~fe~LL~~~~P~  410 (503)
                      .|.|.-=+|+.+.+++ .|.+.+.-++..|   +. .|  ++|+|.....+     +||...    +..+|.+|+...|.
T Consensus      1101 ~y~g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~~~~~~vE~ll~~E~P~ 1180 (1296)
T PF14961_consen 1101 SYPGHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYFCSCHYVEMLLKAELPL 1180 (1296)
T ss_pred             CCCCchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhhhHHHHHHHHHHhhccH
Confidence            6778887787776666 4555555444433   22 22  35666532221     444443    46799999999999


Q ss_pred             HHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhc
Q psy7828         411 LFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEI  489 (503)
Q Consensus       411 L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~  489 (503)
                      ++.-|.-.|..|..++.+|+.-||=+.+++..+..--=..+.+| .++-.++++|||+..+++||+.....++..+|+.
T Consensus      1181 V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G-~dyqvY~~VailkHlq~~ilq~~q~q~L~~flke 1258 (1296)
T PF14961_consen 1181 VFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYG-PDYQVYICVAILKHLQPEILQHTQTQDLQVFLKE 1258 (1296)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcC-ccceeehhHHHHHHhhHHHHHhhhhchHHHHhhh
Confidence            99999999999999999999999999999988876655555534 6788899999999999999988766777777764

>KOG2224|consensus

Probab=94.76  E-value=0.0083  Score=63.02  Aligned_cols=46  Identities=13%  Similarity=0.146  Sum_probs=34.1

Q ss_pred             cccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHh
Q psy7828         332 TNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRY  379 (503)
Q Consensus       332 ~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~  379 (503)
                      .++.+++..|.-|  |-|||++++||.+--..+|.++||||+.+|...
T Consensus       527 illn~avyn~~m~--ysqgmsdllapvlcevqnesetfwcfvglmqgm  572 (781)
T KOG2224|consen  527 ILLNFAVYNPAMG--YSQGMSDLLAPVLCEVQNESETFWCFVGLMQGM  572 (781)
T ss_pred             HHHhheeeccccc--ccccchhhcchhhhhhccccchhhhhhhhhccc
Confidence            3344443334434  778999999998777788999999999998643

>KOG1648|consensus

Probab=89.93  E-value=0.047  Score=58.51  Aligned_cols=193  Identities=17%  Similarity=0.224  Sum_probs=110.5

Q ss_pred             HHHHHhcCCC---hHHHHhhhhcCCCcchHHHHHHHhhCCCCCC--------C---ChHHHHHHHHcccccchHHHHHhh
Q psy7828         213 LGEKVLNSKH---APVAQEFLKKGSPRCLRGKIWCQVLGSEATP--------D---NSKYFEQLKSSVLTYDLLIDKLTI  278 (503)
Q Consensus       213 ~~~~vl~~~~---~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~--------~---~~~~Ye~L~~~~~~~~~~~d~lI~  278 (503)
                      .+++..+...   -..++.-.++|+-...|...|..+++-....        .   -.++|++-....-.-+.   ..|.
T Consensus       535 ~W~qy~~d~t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l~~~~~~~~---~~~~  611 (813)
T KOG1648|consen  535 FWKQYRADPTIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNLITLFRANL---HRID  611 (813)
T ss_pred             HHHHHhcCCchHHHHHHHHHHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHHHHHHhhhe---eeec
Confidence            3444444433   3347778899999999999999998764311        1   13667653222111111   2467


Q ss_pred             hccCCcCCCCCCCchhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHH
Q psy7828         279 KDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPF  358 (503)
Q Consensus       279 kDv~RT~~~d~~yf~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapL  358 (503)
                      +|+.|.- ..-.||...|.+..      |  .+ .+          .|...          .-.+|  |+|||.++.+|+
T Consensus       612 kd~e~~~-~~~~~fs~~~~les------~--~~-~~----------~~~~~----------~l~~~--~~~~~~dl~~p~  659 (813)
T KOG1648|consen  612 KDVERCD-RNLMFFSNKDNLES------R--RV-MY----------TYVRR----------NLEEG--YTQGMCDLLAPL  659 (813)
T ss_pred             chhhhCc-chheeecCCcchhh------h--ee-ee----------eeecc----------ccccc--cccchhhccCCc
Confidence            8887763 33344555554432      0  00 00          01100          01235  789999999999


Q ss_pred             HHhccChhHHHHHHHHHHHHhhcccCCCC--cChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcC
Q psy7828         359 CYLYDDVISLYFTFRAFYLRYFYHLHQVS--SNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSG  436 (503)
Q Consensus       359 l~l~~dEedaFw~f~~L~~~~~~~l~~~~--~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~  436 (503)
                      +.-+.||.-.--||.-+|-+-  +.++..  +...|+..+     ++.+-.+| |-.-++    ..+...|+||..-|-+
T Consensus       660 ~~~~ed~~~~~e~~s~~~~~q--~~~~~q~~~~~~~l~~~-----r~~~v~~~-l~s~id----~~qa~~f~~~~~~~~~  727 (813)
T KOG1648|consen  660 LVTFEDEALTLECFSLLMLRQ--RGKFPQRPGMSKCLLNL-----RLIQVVDP-LISDID----YAQALSFRWFLLDFKR  727 (813)
T ss_pred             CCChhhcccccCCCcHHHHHh--cccCCCCCCcccccccc-----cchhhhcc-hhcchh----hhhhcceeeeccCccc
Confidence            887777755555666565544  334432  111233222     25566666 211111    1234569999999999


Q ss_pred             CCChhhHHHHHHHHHh
Q psy7828         437 HLPPDQILYLWDLILA  452 (503)
Q Consensus       437 ~lp~~~vLrIWD~~l~  452 (503)
                      .+.-+....+|.+++.
T Consensus       728 ~~s~~~~~~~~~~~~~  743 (813)
T KOG1648|consen  728 ELSYECTYKVWEVIWA  743 (813)
T ss_pred             ccCCCCcceeeEeecc
Confidence            9999999999998887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	503
3hzj_A	310	Crystal Structure Of The Rabgap Domain Of The Rabga		3e-04

>pdb|3HZJ|A Chain A, Crystal Structure Of The Rabgap Domain Of The Rabgap1l Protein Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 50/257 (19%)
Query: 229 FLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASND 288
            +K G P  LR ++W  + G     DN    ++ +  ++T D   + +  +D+  T    
Sbjct: 29  LVKSGVPEALRAEVWQLLAGCH---DNQAXLDRYRI-LITKDSAQESVITRDIHRTFPAH 84
Query: 289 DQYFV-----FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPS 343
           D YF       ++ LY+I   +S   E +            G  + ++     L+++ P 
Sbjct: 85  D-YFKDTGGDGQESLYKICKAYSVYDEDI------------GYCQGQSFLAAVLLLHXPE 131
Query: 344 GIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFH-- 401
                         FC L    I   +  R  Y   F  LH            C  +   
Sbjct: 132 -----------EQAFCVLVK--IXYDYGLRDLYRNNFEDLH------------CKFYQLE 166
Query: 402 RLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISI 461
           RL Q   P L  HF  +++       +W +  F+   P   + ++ DL+L  + L II  
Sbjct: 167 RLXQEQLPDLHSHFSDLNLEAHXYASQWFLTLFTAKFPLCXVFHIIDLLLC-EGLNIIFH 225
Query: 462 LAVAILSFRRENLMQVD 478
           +A+A+L   +E+L+Q D
Sbjct: 226 VALALLKTSKEDLLQAD 242

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	503
3qwl_A	294	TBC1 domain family member 7; RAB GTPase activation	1e-21
2qq8_A	334	TBC1 domain family member 14; structural genomics	2e-12
3hzj_A	310	Rabgap1L, RAB GTPase-activating protein 1-like; st	1e-11
3qye_A	331	TBC1 domain family member 1; rabgap, RAB, myocytes	2e-11
1fkm_A	396	Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein	7e-11
2qfz_A	345	TBC1 domain family member 22A; RAB-GAP, GTPase act	7e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08

>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens} Length = 294

 Score = 94.3 bits (234), Expect = 1e-21
 Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 43/273 (15%)

Query: 211 ITLGEKVLNSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYD 270
           I L +  L+++   +     +   P   R  +W +VL     P +  + + +      Y 
Sbjct: 31  ILLKDDRLDTEK--LCTFSQRFPLPSMYRALVW-KVLLGILPPHHESHAKVMMYRKEQYL 87

Query: 271 LLIDKLTIKDVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNK 330
            ++  L +      A+   + ++    L    L  S    +    E              
Sbjct: 88  DVLHALKVVRFVSDATPQAEVYLRMYQLESGKLPRSPSFPLEPDDE-------------- 133

Query: 331 NTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNE 390
                               F   A     + +D +  Y+  R F  +            
Sbjct: 134 -------------------VFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRD----- 169

Query: 391 QGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLI 450
             +  L   F + L   + +L  H +     P      W  RCF+G LP   +  +WD +
Sbjct: 170 -SLPQLPKAFEQYLNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKV 228

Query: 451 LAYDSLEIISILAVAILSFRRENLMQVDTLQNV 483
           ++  S +I+  +AV IL   +  +M +++ + +
Sbjct: 229 VS-GSCKILVFVAVEILLTFKIKVMALNSAEKI 260

>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens} Length = 334

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 2/99 (2%)

Query: 381 YHLHQVSSNEQGILSLCI-LFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLP 439
                    + G++      F    +   P+LF HFK  ++ P   +  WI   +S  LP
Sbjct: 184 PCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLP 243

Query: 440 PDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVD 478
            D    +WD+    D  E +   A+ IL    + L ++D
Sbjct: 244 LDLACRIWDVFC-RDGEEFLFRTALGILKLFEDILTKMD 281

>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens} Length = 310

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 400 FHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEII 459
             RL+Q   P L  HF  +++       +W +  F+   P   + ++ DL+L  + L II
Sbjct: 165 LERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLL-CEGLNII 223

Query: 460 SILAVAILSFRRENLMQVD 478
             +A+A+L   +E+L+Q D
Sbjct: 224 FHVALALLKTSKEDLLQAD 242

>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A Length = 331

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 400 FHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEII 459
             RLL  Y   L+ H +   I P      W +  F+   P   +  ++D+I      E+I
Sbjct: 199 LSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIF-LQGTEVI 257

Query: 460 SILAVAILSFRRENLMQVDTLQNV 483
             +A+++L   +  ++Q + L+ +
Sbjct: 258 FKVALSLLGSHKPLILQHENLETI 281

>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A* Length = 396

 Score = 63.1 bits (153), Expect = 7e-11
 Identities = 39/274 (14%), Positives = 85/274 (31%), Gaps = 51/274 (18%)

Query: 232 KGSPRCLRGKIWCQVLG----------SEATPDNSKYFEQLKSSV---LTYDLLIDKLTI 278
            G P+  R  +W  ++G                  +Y + LK +     + D+       
Sbjct: 32  NGIPKIHRPVVWKLLIGYLPVNTKRQEGFLQRKRKEYRDSLKHTFSDQHSRDIPTWHQIE 91

Query: 279 KDVQLTASNDD--QYFVFEDLLYQILLCFSRDTEILSIFEHSSA------SPLYGPLKNK 330
            D+  T  +    Q+   ++ L +IL  ++          H ++      + L  P    
Sbjct: 92  IDIPRTNPHIPLYQFKSVQNSLQRILYLWAI--------RHPASGYVQGINDLVTPF--- 140

Query: 331 NTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISL------YFTFRAF--YLRYFYH 382
                    +    + P     +          D          ++        +   Y 
Sbjct: 141 ------FETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQITDNY- 193

Query: 383 LHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQ 442
                  + GIL       +L++R +  L+ HF+  H+  I+  F+W+            
Sbjct: 194 ----IHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGT 249

Query: 443 ILYLWDLILAYDSLEIISILAVAILSFRRENLMQ 476
           ++ +WD  L+  S E+ S  +++    +      
Sbjct: 250 VIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPT 283

>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A Length = 345

 Score = 59.6 bits (144), Expect = 7e-10
 Identities = 36/295 (12%), Positives = 87/295 (29%), Gaps = 43/295 (14%)

Query: 207 ESERITLGEKVLNSKHAPVA--QEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKS 264
           E+ R+   +++L   +  +   +     G P+ +R   W  + G     +  +    L+ 
Sbjct: 22  EASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGY-LPANVDRRPATLQR 80

Query: 265 SVLTYDLLIDKLTI---------------KDVQLTASNDDQYFVFE--DLLYQILLCFSR 307
               Y   I+                    D+    S +      +  ++  +IL  ++ 
Sbjct: 81  KQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRM-SPEALILQPKVTEIFERILFIWAI 139

Query: 308 DTEILSIFE--HSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDV 365
                   +  +   +P +     +    E +     S                    + 
Sbjct: 140 RHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVS----------GVPAEVLCNIEA 189

Query: 366 ISLYFTFRAF--YLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPI 423
            + Y+        ++  Y   Q      GI     +   L+ R + Q+  H     +  +
Sbjct: 190 DT-YWCMSKLLDGIQDNYTFAQ-----PGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYL 243

Query: 424 KIVFKWIMRCFSGHLPPDQILYLWDLILA--YDSLEIISILAVAILSFRRENLMQ 476
           +  F+W+       +P    + LWD   +           +  A L   R+ +++
Sbjct: 244 QFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILE 298

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 3e-08
 Identities = 63/468 (13%), Positives = 129/468 (27%), Gaps = 136/468 (29%)

Query: 34  KSTL-LESIKNVGIETQIRNTVFHWMRSHKIDLDSNSWAEPLTYL-RKAQFQWEKRIQKS 91
           K+ + L+   +  ++ ++   +F W+     +    +  E L  L  +    W  R   S
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIF-WLNLKNCN-SPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 92  LN--SMCNEIGIQLSRFRLPSDR-------DDMKDKWT---------------------- 120
            N     + I  +L R               ++++                         
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280

Query: 121 --ELSTYEVDLTQYRPVYAPKDFLEVL----------------------ISLKSSNYRSV 156
               +T  + L  +     P +   +L                      +S+ + + R  
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR-- 338

Query: 157 EGEGSWDFTQ----------IPLKIKSLS--ELRQLYKELARGESVIGTNSYNNPNPYFN 204
           +G  +WD  +          I   +  L   E R+++  L+     +           F 
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-----V-----------FP 382

Query: 205 ALESERITLGEKVL----NSKHAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFE 260
              S  I     +L               + K     L  K   +   S      S Y E
Sbjct: 383 --PSAHIP--TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS----IPSIYLE 434

Query: 261 QLKSSVLTYDL---LIDKLTIKDV----QLTASNDDQYFVFEDLLYQILLCFSRDTEILS 313
                   Y L   ++D   I        L     DQYF +  + +   L      E ++
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-YSHIGHH--LKNIEHPERMT 491

Query: 314 IFEHSSASPLY---GPLKNKNTNTENLVVYPPSGIIPFHGFTMYA---TPFCYLYDDVIS 367
           +F       ++     L+ K  +         S +        Y          Y+ +++
Sbjct: 492 LFRM-----VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546

Query: 368 LYFTFRAFYLRYFYHLHQVSSNEQGILSLCILF---------HRLLQR 406
                  F  +   +L  + S    +L + ++          H+ +QR
Sbjct: 547 AILD---FLPKIEENL--ICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	503
3qye_A	331	TBC1 domain family member 1; rabgap, RAB, myocytes	100.0
2qfz_A	345	TBC1 domain family member 22A; RAB-GAP, GTPase act	100.0
2qq8_A	334	TBC1 domain family member 14; structural genomics	100.0
3hzj_A	310	Rabgap1L, RAB GTPase-activating protein 1-like; st	100.0
1fkm_A	396	Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein	100.0
4hl4_A	292	TBC1 domain family member 20; rabgap, RAB1B, hydro	100.0
3qwl_A	294	TBC1 domain family member 7; RAB GTPase activation	100.0

>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A

Probab=100.00  E-value=7.2e-41  Score=343.07  Aligned_cols=244  Identities=17%  Similarity=0.223  Sum_probs=201.6

Q ss_pred             HHHHHHHHhcCC-------ChHHHHhhhhcCCCcchHHHHHHHhhCCCCC--------CCChHHHHHHHHcccccchHHH
Q psy7828         210 RITLGEKVLNSK-------HAPVAQEFLKKGSPRCLRGKIWCQVLGSEAT--------PDNSKYFEQLKSSVLTYDLLID  274 (503)
Q Consensus       210 r~~~~~~vl~~~-------~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~--------~~~~~~Ye~L~~~~~~~~~~~d  274 (503)
                      +.+.+++++...       +..++++++++|||+++|+.||+.++|+.+.        ....+.|++|.++...    ..
T Consensus        29 ~~~~W~~~l~~~~~~~~~~~~~~l~~~~~~GIP~~lR~~vW~~Llg~~~~~~~~~~~~~~~~~~Y~~l~~~~~~----~~  104 (331)
T 3qye_A           29 VTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQFHLKHQFPSKQQPKDVPYKELLKQLTS----QQ  104 (331)
T ss_dssp             HHHHHHHHHTCTTGGGCCCCHHHHHHHHHTCCCGGGHHHHHHHHHHHHHHHCCCCSSSCCCCCCHHHHTTSCCT----TH
T ss_pred             HHHHHHHHhccCCCCcccCCHHHHHHHHHcCCCHHHHHHHHHHHhCcchhhhcchhhhhhchHHHHHHHHhcCC----ch
Confidence            445556666543       3678999999999999999999999998541        1234679888775432    24


Q ss_pred             HHhhhccCCcCCCCCCCc----hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccc
Q psy7828         275 KLTIKDVQLTASNDDQYF----VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHG  350 (503)
Q Consensus       275 ~lI~kDv~RT~~~d~~yf----~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qG  350 (503)
                      ++|.+|++||++++..|.    +.++.+.+|+.||+..                               .|..|  ||||
T Consensus       105 ~~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~ay~~~-------------------------------~p~ig--Y~QG  151 (331)
T 3qye_A          105 HAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLL-------------------------------DQEVG--YCQG  151 (331)
T ss_dssp             HHHHHHHTTSSTTSTTTCSTTCHHHHHHHHHHHHHHHH-------------------------------CTTTS--SCTT
T ss_pred             hHHHHhhcccCCCchhhcCCCcccHHHHHHHHHHHHHH-------------------------------CCCcc--cccc
Confidence            689999999998877653    3455677777777531                               23346  8999


Q ss_pred             hHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHH
Q psy7828         351 FTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWI  430 (503)
Q Consensus       351 m~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~Wf  430 (503)
                      |+.+||+|+++ .+|++|||||+.+|+++..+..|..+. +|+...+.+|+.||+.++|+|++||++.|+.+..|+++||
T Consensus       152 m~~i~a~ll~~-~~E~~aF~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~ll~~~~p~L~~hL~~~~i~~~~~~~~W~  229 (331)
T 3qye_A          152 LSFVAGILLLH-MSEEEAFKMLKFLMFDMGLRKQYRPDM-IILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWF  229 (331)
T ss_dssp             HHHHHHHHHTT-SCHHHHHHHHHHHHTTTCGGGGGSTTC-HHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCGGGTSHHHH
T ss_pred             HHHHHHHHHHH-hhHHHHHHHHHHHHHhcCchhcCCCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence            99999988765 579999999999998874444565554 7888889999999999999999999999999999999999


Q ss_pred             HHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhc-ccCC
Q psy7828         431 MRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEI-LYGR  493 (503)
Q Consensus       431 ltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~-ls~~  493 (503)
                      +|+|++.+|++.++||||.||+ +|..+++++|+|||+.+++.||++++.++++.+|++ ++++
T Consensus       230 l~lF~~~lp~~~~lrlwD~~l~-~g~~~l~~valaiL~~~~~~ll~~~~~~~il~~l~~~~p~~  292 (331)
T 3qye_A          230 LTMFASQFPLGFVARVFDMIFL-QGTEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNL  292 (331)
T ss_dssp             HSTTTTTSCHHHHHHHHHHHHH-HCTTHHHHHHHHHHHHTHHHHHTCCSHHHHHHHHHHTTTCC
T ss_pred             HHHhhhhCCHHHHHHHHHHHHH-CCcHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCC
Confidence            9999999999999999999999 667899999999999999999999999999999987 5543

>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A

Probab=100.00  E-value=7.7e-41  Score=344.83  Aligned_cols=251  Identities=15%  Similarity=0.216  Sum_probs=204.4

Q ss_pred             hhHHHHHHHHHHHhcCC--ChHHHHhhhhcCCCcchHHHHHHHhhCCCCCCC---------ChHHHHHHHHcccc-----
Q psy7828         205 ALESERITLGEKVLNSK--HAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPD---------NSKYFEQLKSSVLT-----  268 (503)
Q Consensus       205 ~~~~er~~~~~~vl~~~--~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~---------~~~~Ye~L~~~~~~-----  268 (503)
                      .-+.+|.+.+++++++.  +..++++++++|||+++|+.||+.++|+.+...         .++.|+.|+++...     
T Consensus        20 ~~e~~r~~kw~~~l~~~~~d~~~Lr~l~~~GiP~~~R~~vW~~llg~~p~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~   99 (345)
T 2qfz_A           20 EREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHYYDSRNDE   99 (345)
T ss_dssp             ----CHHHHHHHHHHCSBCCHHHHHHHHTTCCCGGGHHHHHHHHTTSSCSBGGGHHHHHHHHHHHHHHHHHHC-------
T ss_pred             chhHHHHHHHHHHHcCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Confidence            35667888889998864  478999999999999999999999999976532         24688888876321     


Q ss_pred             cchHHHHHhhhccCCcCCCCCCCchh---hHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCC
Q psy7828         269 YDLLIDKLTIKDVQLTASNDDQYFVF---EDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGI  345 (503)
Q Consensus       269 ~~~~~d~lI~kDv~RT~~~d~~yf~f---~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~  345 (503)
                      .+....++|.+||.||+|+  .||..   ++.+.+||.||+..                               .|..| 
T Consensus       100 ~~~~~~~~I~~Dv~RT~p~--~~F~~~~~~~~L~rIL~~ya~~-------------------------------~p~vg-  145 (345)
T 2qfz_A          100 VHQDTYRQIHIDIPRMSPE--ALILQPKVTEIFERILFIWAIR-------------------------------HPASG-  145 (345)
T ss_dssp             -CHHHHHHHHHHGGGCSCH--HHHTSHHHHHHHHHHHHHHHHH-------------------------------CTTTC-
T ss_pred             chHHHHHHHHHhCcccCCc--cccCCchHHHHHHHHHHHHHHH-------------------------------CCCCC-
Confidence            1334557999999999876  44543   24455566555431                               24446 


Q ss_pred             ccccchHHHHHHHHHhccC------------------------hhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHH
Q psy7828         346 IPFHGFTMYATPFCYLYDD------------------------VISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFH  401 (503)
Q Consensus       346 i~~qGm~~iaapLl~l~~d------------------------EedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe  401 (503)
                       |||||+++||||++++.+                        |++|||||+++|+++  +.+|..+ .+|+...+.+|+
T Consensus       146 -Y~QGm~~i~a~ll~v~~~~~~~~~~~~~~~~~~l~~~~~~~~E~daF~~f~~lm~~~--~~~y~~~-~~~i~~~~~~l~  221 (345)
T 2qfz_A          146 -YVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGI--QDNYTFA-QPGIQMKVKMLE  221 (345)
T ss_dssp             -CCTTHHHHHHHHHHHHHGGGCC-----CCCCTTSCHHHHHHHHHHHHHHHHHHHHTS--GGGSSTT-CHHHHHHHHHHH
T ss_pred             -cccChHHHHHHHHHHHHhhhcccccccccchhhhhhhhhhhHHHHHHHHHHHHHHcc--ccccccC-cHHHHHHHHHHH
Confidence             899999999999988742                        899999999999987  5456554 479999999999


Q ss_pred             HHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCch---HHHHHHHHHHHHhHHHhhCCC
Q psy7828         402 RLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLE---IISILAVAILSFRRENLMQVD  478 (503)
Q Consensus       402 ~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~---il~~vAlAIL~~~~~~LL~~~  478 (503)
                      .||++++|+|++||++.|+.+..|+++||+|+|+++||++.++||||.+|++ |..   +++++|+|+|...+++||++.
T Consensus       222 ~ll~~~dP~L~~hL~~~~i~~~~f~~~W~~~lF~~~~p~~~~lrlWD~~l~~-g~~~~~~~~~v~~AiL~~~~~~ll~~~  300 (345)
T 2qfz_A          222 ELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSE-PDGFSHFHLYVCAAFLVRWRKEILEEK  300 (345)
T ss_dssp             HHHHHHCHHHHHHHHHTTCCHHHHHHHHHHTTTTTTSCHHHHHHHHHHHTTS-TTTTTTHHHHHHHHHHHHTHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHcCCchhhHHHHHHHHHHcccCCHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999999999999999999994 433   789999999999999999888


Q ss_pred             CHHHHHHHHhcccCCC
Q psy7828         479 TLQNVEVGYEILYGRY  494 (503)
Q Consensus       479 ~~~~i~~~L~~ls~~~  494 (503)
                      ++++++.+|++++...
T Consensus       301 d~~~il~~L~~~p~~~  316 (345)
T 2qfz_A          301 DFQELLLFLQNLPTAH  316 (345)
T ss_dssp             CHHHHHHHHTSCSCTT
T ss_pred             CHHHHHHHHHcCCCcC
Confidence            9999999999988754

>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=342.90  Aligned_cols=246  Identities=20%  Similarity=0.292  Sum_probs=199.2

Q ss_pred             HHHHHH-HHhcCCC----hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHHHHccc-cc--------------
Q psy7828         210 RITLGE-KVLNSKH----APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVL-TY--------------  269 (503)
Q Consensus       210 r~~~~~-~vl~~~~----~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~-~~--------------  269 (503)
                      |..++. .++.+..    ..++++++++|||+++|+.||+.++|+.. ..+.+.|+.+.+... ++              
T Consensus        20 ~~~~W~~~il~~w~~~~~~~~lr~l~~~GIP~~lR~~vW~~llg~~~-~~~~~~y~~ll~~~~~~~~~~~~~~~~~~~~d   98 (334)
T 2qq8_A           20 AVLTWNNEILPNWETMWCSRKVRDLWWQGIPPSVRGKVWSLAIGNEL-NITHELFDICLARAKERWRSLSTGGSEVENED   98 (334)
T ss_dssp             HHHHHHHTTGGGCC--CCCHHHHHHHHTCCCHHHHHHHHHHHHCCTT-CCCHHHHHHHHHHHHHHC--------------
T ss_pred             HHHHHHHHHHHhHHhccChHHHHHHHHCCCCHHHHHHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHhccccccCcccc
Confidence            444454 3555433    57899999999999999999999999864 345678887754311 00              


Q ss_pred             -------chHHHHHhhhccCCcCCCCCCCc---hhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccc
Q psy7828         270 -------DLLIDKLTIKDVQLTASNDDQYF---VFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVV  339 (503)
Q Consensus       270 -------~~~~d~lI~kDv~RT~~~d~~yf---~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~  339 (503)
                             .....++|++||+||+|++..|.   +.++.+.+||.||+..                               
T Consensus        99 ~~~~~~~~~~~~~~I~~Dv~RT~p~~~~F~~~~~~~~~L~rIL~aya~~-------------------------------  147 (334)
T 2qq8_A           99 AGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCY-------------------------------  147 (334)
T ss_dssp             --------CCHHHHHHHHHHTSSGGGCSSSTTSTTHHHHHHHHHHHHHH-------------------------------
T ss_pred             cccccccchhHHHHHHHHHhhcCCCchhhcCCCchHHHHHHHHHHHHHh-------------------------------
Confidence                   01234799999999998876553   3467788888877642                               


Q ss_pred             cCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcC
Q psy7828         340 YPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIH  419 (503)
Q Consensus       340 ~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~  419 (503)
                      .|..|  ||||||++||||++. .+|++|||||+++|+++.++..|..+ .+|+...+.+|+.||+.++|+|++||++.|
T Consensus       148 ~p~vg--Y~QGm~~iaa~lLl~-~~E~~aF~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~~P~L~~hL~~~~  223 (334)
T 2qq8_A          148 RPDVG--YVQGMSFIAAVLILN-LDTADAFIAFSNLLNKPCQMAFFRVD-HGLMLTYFAAFEVFFEENLPKLFAHFKKNN  223 (334)
T ss_dssp             CTTTC--CCTTHHHHHHHHHHH-SCHHHHHHHHHHHHTSHHHHHHHSSC-CHHHHHHHHHHHHHHHHHCHHHHHHHHHTT
T ss_pred             CCCCC--cchhHHHHHHHHHhc-CCHHHHHHHHHHHHHhhhHHhccCCC-hHHHHHHHHHHHHHHHHHCHHHHHHHHHcC
Confidence            23345  899999999998865 57999999999999876443223333 478888899999999999999999999999


Q ss_pred             CCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCC
Q psy7828         420 IHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGR  493 (503)
Q Consensus       420 i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~  493 (503)
                      +.+.+|+++||+|+|++++|++.++||||.+|+ +|..+++++|+|||+..++.|+++ +.++++.+|+++|..
T Consensus       224 i~~~~~~~~W~ltlF~~~lp~~~~lriWD~~l~-eg~~~l~~valaiL~~~~~~Ll~~-d~~~il~~L~~lp~~  295 (334)
T 2qq8_A          224 LTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCR-DGEEFLFRTALGILKLFEDILTKM-DFIHMAQFLTRLPED  295 (334)
T ss_dssp             CCGGGTHHHHHHTTTTTTSCHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHTHHHHHTC-CHHHHHHHHHSCCTT
T ss_pred             CCccchHHHHHHHHhcccCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHhCCCc
Confidence            999999999999999999999999999999999 678999999999999999999997 588999999998763

>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.9e-40  Score=335.78  Aligned_cols=230  Identities=18%  Similarity=0.276  Sum_probs=193.4

Q ss_pred             ChHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhhhccCCcCCCCCCCc----hhhHH
Q psy7828         222 HAPVAQEFLKKGSPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTIKDVQLTASNDDQYF----VFEDL  297 (503)
Q Consensus       222 ~~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~kDv~RT~~~d~~yf----~f~d~  297 (503)
                      ...++++++++|||+++|+.||+.++|+.+.....+.|..|.++.    ...+++|.+|++||+|++..|.    +.++.
T Consensus        22 ~~~~l~~l~~~GIP~~lR~~vW~~llg~~~~~~~~~~Y~~l~~~~----~~~~~~I~~Dv~Rt~p~~~~f~~~~~~~~~~   97 (310)
T 3hzj_A           22 RPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYRILITKD----SAQESVITRDIHRTFPAHDYFKDTGGDGQES   97 (310)
T ss_dssp             CCTTHHHHHHHCCCGGGHHHHHHHHTTCCCCHHHHHHHHHHTTSC----CTTHHHHHHHHTTSSTTSTTTSSTTSHHHHH
T ss_pred             CHHHHHHHHHCCCCHHHHHHHHHHHHCCCcchhHHHHHHHHHhcc----CCcHHHHHHHHHhhCCCchhhcCCCchhHHH
Confidence            357899999999999999999999999987644457788876543    2345799999999999876553    24566


Q ss_pred             HHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHHHhccChhHHHHHHHHHHH
Q psy7828         298 LYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFCYLYDDVISLYFTFRAFYL  377 (503)
Q Consensus       298 l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl~l~~dEedaFw~f~~L~~  377 (503)
                      +.+|+.||+..                               .|..|  |||||+.+||||++++ +|++|||||+++|.
T Consensus        98 L~~IL~ay~~~-------------------------------~p~ig--Y~QGm~~iaa~lL~~~-~e~~aF~~l~~l~~  143 (310)
T 3hzj_A           98 LYKICKAYSVY-------------------------------DEDIG--YCQGQSFLAAVLLLHM-PEEQAFCVLVKIMY  143 (310)
T ss_dssp             HHHHHHHHHHH-------------------------------CTTTC--SCTTHHHHHHHHHHHS-CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-------------------------------CCCCC--ccCCHHHHHHHHHHhC-CHHHHHHHHHHHHh
Confidence            77777777542                               23346  8999999999988776 79999999999999


Q ss_pred             HhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCCch
Q psy7828         378 RYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDSLE  457 (503)
Q Consensus       378 ~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~~~  457 (503)
                      ++..+..|..+ .+|+...+.+|+.||+.++|+|++||++.|+.+..|+++||+|+|++++|++.++||||.+++ +|.+
T Consensus       144 ~~~~~~~~~~~-~~~~~~~~~~l~~ll~~~~p~L~~hL~~~~i~~~~~~~~W~ltlF~~~lp~~~~~riwD~~l~-~g~~  221 (310)
T 3hzj_A          144 DYGLRDLYRNN-FEDLHCKFYQLERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLC-EGLN  221 (310)
T ss_dssp             TSCGGGGTHHH-HHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGTSHHHHHHTTTTTSCHHHHHHHHHHHHH-HCTT
T ss_pred             ccccccccccc-HHHHHHHHHHHHHHHHHhChHHHHHHHHcCCChHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-CCcH
Confidence            87444344332 368888889999999999999999999999999999999999999999999999999999999 6678


Q ss_pred             HHHHHHHHHHHHhHHHhhCCCCHHHHHHHHh-cccC
Q psy7828         458 IISILAVAILSFRRENLMQVDTLQNVEVGYE-ILYG  492 (503)
Q Consensus       458 il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~-~ls~  492 (503)
                      +++++|+||++.++++|+++ +.++++.+|+ +++.
T Consensus       222 ~l~~v~lail~~~~~~Ll~~-d~~~~l~~l~~~lp~  256 (310)
T 3hzj_A          222 IIFHVALALLKTSKEDLLQA-DFEGALKFFRVQLPK  256 (310)
T ss_dssp             HHHHHHHHHHHHTHHHHHTC-CHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHhCcc
Confidence            99999999999999999998 7999999985 5554

>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A*

Probab=100.00  E-value=9.7e-40  Score=342.99  Aligned_cols=248  Identities=18%  Similarity=0.287  Sum_probs=206.1

Q ss_pred             HHHHHHHHHHhcCCC---hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCC---------ChHHHHHHHHccc----ccch
Q psy7828         208 SERITLGEKVLNSKH---APVAQEFLKKGSPRCLRGKIWCQVLGSEATPD---------NSKYFEQLKSSVL----TYDL  271 (503)
Q Consensus       208 ~er~~~~~~vl~~~~---~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~---------~~~~Ye~L~~~~~----~~~~  271 (503)
                      .+|..+++++|++..   ..++++++++|||+++|+.||+.++|+.+...         .++.|+.|+++..    ..+.
T Consensus         5 ~~R~~kw~~lL~~~~~~d~~~Lr~l~~~GIP~~lR~~vW~~LLg~~~~~~~~~~~~l~~~~~~Y~~l~~~~~~~~~~~~~   84 (396)
T 1fkm_A            5 IQRISKFDNILKDKTIINQQDLRQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGFLQRKRKEYRDSLKHTFSDQHSRDI   84 (396)
T ss_dssp             HHHHHHHHHHHSSCSBCCHHHHHHHHTTCCCGGGHHHHHHHHTTCSCSBGGGHHHHHHHHHHHHHHHHHHTSSSSCSTHH
T ss_pred             HHHHHHHHHHHcCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCChhHHHHHHHHHHHHHHHHHHHHhhccCcccH
Confidence            578889999998754   67899999999999999999999999987642         2478998887632    2334


Q ss_pred             HHHHHhhhccCCcCCCCCCCch---hhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccc
Q psy7828         272 LIDKLTIKDVQLTASNDDQYFV---FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPF  348 (503)
Q Consensus       272 ~~d~lI~kDv~RT~~~d~~yf~---f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~  348 (503)
                      ...++|++||.||++++.. |.   .++.+.+||.+|+..                               .|..|  ||
T Consensus        85 ~~~~qI~~Dv~RT~p~~~~-F~~~~~~~~L~rIL~aya~~-------------------------------np~iG--Y~  130 (396)
T 1fkm_A           85 PTWHQIEIDIPRTNPHIPL-YQFKSVQNSLQRILYLWAIR-------------------------------HPASG--YV  130 (396)
T ss_dssp             HHHHHHHHHGGGSSTTSGG-GGSHHHHHHHHHHHHHHHHH-------------------------------CTTTC--SC
T ss_pred             HHHHHHHHHhhhhCCCccc-ccCchHHHHHHHHHHHHHHH-------------------------------CCCCC--cc
Confidence            4557999999999987654 43   234566666665431                               34446  89


Q ss_pred             cchHHHHHHHHHhcc---------------------C-------hhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHH
Q psy7828         349 HGFTMYATPFCYLYD---------------------D-------VISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILF  400 (503)
Q Consensus       349 qGm~~iaapLl~l~~---------------------d-------EedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~f  400 (503)
                      |||+++||||++++.                     +       |++|||||+++|+++  +.+|..+. +|+...+.+|
T Consensus       131 QGmn~i~a~ll~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~E~daF~~f~~lm~~~--~~~f~~~~-~~i~~~~~~l  207 (396)
T 1fkm_A          131 QGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQI--TDNYIHGQ-PGILRQVKNL  207 (396)
T ss_dssp             TTHHHHHHHHHHHHHGGGSCGGGGGGTTTSCGGGTCCHHHHHHHHHHHHHHHHHHHGGG--GGGSSTTC-HHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHHhhccccccccccccchhhccchhhhhhhHHHHHHHHHHHHHHH--HHHHhhcH-HHHHHHHHHH
Confidence            999999999998752                     2       899999999999987  54565544 7999999999


Q ss_pred             HHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcC--------------------------
Q psy7828         401 HRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYD--------------------------  454 (503)
Q Consensus       401 e~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~--------------------------  454 (503)
                      +.||++++|+|++||+++|+.+.+|+++||+|+|+++||++.++||||.||++|                          
T Consensus       208 ~~LL~~~dP~L~~hL~~~~i~~~~f~~rW~l~LF~~~~p~~~vlrlWD~~l~eg~~~~~~~~~~~~~~~~~p~~~~~~~~  287 (396)
T 1fkm_A          208 SQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPTEPRV  287 (396)
T ss_dssp             HHHHHHHCHHHHHHHHHTTCCTHHHHHHHHHTTTGGGSCHHHHHHHHHHHHHHHC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHCCCccccchhhhhcccccCCcccccccc
Confidence            999999999999999999999999999999999999999999999999999965                          


Q ss_pred             -----------------------------------C-chHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCC
Q psy7828         455 -----------------------------------S-LEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGR  493 (503)
Q Consensus       455 -----------------------------------~-~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~  493 (503)
                                                         + .++++++|+|+|...+++||++ ++++++.+|++++..
T Consensus       288 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~AlL~~~r~~Ll~~-df~~~l~~L~~~p~~  361 (396)
T 1fkm_A          288 ASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLMEM-DFQETITFLQNPPTK  361 (396)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHTHHHHTTC-CHHHHHHHHTSCSCT
T ss_pred             ccccccccccccccccccccccccccccchhccccchHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHhcCCCC
Confidence                                               1 3789999999999999999985 689999999997764

>4hl4_A TBC1 domain family member 20; rabgap, RAB1B, hydrolase activator, catalytic domain, F GTPase-activating proteins, RAB GTP-binding protein, GTP HY; 2.20A {Homo sapiens} PDB: 4hlq_A*

Probab=100.00  E-value=1.1e-37  Score=314.64  Aligned_cols=246  Identities=13%  Similarity=0.160  Sum_probs=193.3

Q ss_pred             hhhHHHHHHHHHHHhcCC--ChHHHHhhhhcC---CCcchHHHHHHHhhCCCCCCCChHHHHHHHHcccccchHHHHHhh
Q psy7828         204 NALESERITLGEKVLNSK--HAPVAQEFLKKG---SPRCLRGKIWCQVLGSEATPDNSKYFEQLKSSVLTYDLLIDKLTI  278 (503)
Q Consensus       204 ~~~~~er~~~~~~vl~~~--~~~~l~~l~r~G---IP~~lR~~VW~~LLg~~~~~~~~~~Ye~L~~~~~~~~~~~d~lI~  278 (503)
                      +..+..|.+..+++++..  +..+++++++.|   +|+++|+.||+.++|+.+...+. +|..+...    +....++|+
T Consensus        13 ~~~~~~k~~~i~~~l~~~~~dl~~Lr~l~~~~~g~~p~~lR~~vW~~Llg~~~~~~~~-~~~~~~~~----~~~~~~qI~   87 (292)
T 4hl4_A           13 NAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNANDPPP-ISGKNLRQ----MSKDYQQVL   87 (292)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHSTTCSCCHHHHHHHHHHHTTCCSCSCCS-CCCTTHHH----HCTTHHHHH
T ss_pred             cchhHHHHHHHHHHHcCCcccHHHHHHHHcCCCCCCChhHHHHHHHHHhCCCcccCCC-chhhhhcc----cchhHHHHH
Confidence            457778888888898774  478999998854   89999999999999999875432 23222111    223357999


Q ss_pred             hccCCcCCCCCCCch-h-----hHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchH
Q psy7828         279 KDVQLTASNDDQYFV-F-----EDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFT  352 (503)
Q Consensus       279 kDv~RT~~~d~~yf~-f-----~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~  352 (503)
                      +||+||++++..|.. +     ++.+.+|+.||++.                               +|..|  ||||||
T Consensus        88 ~Dv~RT~~~~~~~~~~~~~~~~~~~L~~iL~ay~~~-------------------------------~p~vg--Y~QGm~  134 (292)
T 4hl4_A           88 LDVRRSLRRFPPGMPEEQREGLQEELIDIILLILER-------------------------------NPQLH--YYQGYH  134 (292)
T ss_dssp             HHHHTTGGGSCTTSCHHHHHHHHHHHHHHHHHHHHH-------------------------------CTTCC--CCTTHH
T ss_pred             HhhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHHHH-------------------------------CCCCC--eeccHH
Confidence            999999987654421 1     23344555555431                               34446  899999


Q ss_pred             HHHHHHHHhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHH
Q psy7828         353 MYATPFCYLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMR  432 (503)
Q Consensus       353 ~iaapLl~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~Wflt  432 (503)
                      ++||||+++ .+|++|||||+++++++++. .|..+ ..|+...+.+|+.+|+.++|+|++||++.++ ..+|+++||+|
T Consensus       135 ~iaa~lLl~-~~e~~aF~~l~~l~~~~l~~-~~~~~-~~~~~~~~~~l~~ll~~~~P~L~~hL~~~~i-~~~~~~~W~lt  210 (292)
T 4hl4_A          135 DIVVTFLLV-VGERLATSLVEKLSTHHLRD-FMDPT-MDNTKHILNYLMPIIDQVNPELHDFMQSAEV-GTIFALSWLIT  210 (292)
T ss_dssp             HHHHHHHHH-HCHHHHHHHHHHHHHTTTTG-GGCSS-SCTTTGGGGGHHHHHHHHCHHHHHHHC-CCC-CSGGGHHHHHT
T ss_pred             HHHHHHHHH-cCHHHHHHHHHHHHHHHHHH-hcccc-hHHHHHHHHHHHHHHHHHCHHHHHHHHHcCC-CcchHHHHHHH
Confidence            999999855 57999999999999976542 33333 3577778889999999999999999999999 57999999999


Q ss_pred             HhcCCCC-hhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCC-CHHHHHHHHhcccC
Q psy7828         433 CFSGHLP-PDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVD-TLQNVEVGYEILYG  492 (503)
Q Consensus       433 lFs~~lp-~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~-~~~~i~~~L~~ls~  492 (503)
                      +|++++| ++.++||||.+++ +|..+++++|+||+..++++||+++ +++.+..+++++++
T Consensus       211 lF~~~l~~~~~~~rlWD~~l~-~g~~~~~~v~~ail~~~~~~Ll~~~~d~~~l~~~l~~lp~  271 (292)
T 4hl4_A          211 WFGHVLSDFRHVVRLYDFFLA-CHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQ  271 (292)
T ss_dssp             TTTTTSCCHHHHHHHHHHHHH-SCTTHHHHHHHHHHHHTHHHHHTSCCSTTHHHHHHHSCCS
T ss_pred             HHhhhcCcHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCC
Confidence            9999996 9999999999999 6688999999999999999999974 67888899999984

>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens}

Probab=100.00  E-value=3.9e-35  Score=296.27  Aligned_cols=233  Identities=17%  Similarity=0.250  Sum_probs=179.3

Q ss_pred             HHHHHHhcCCC--hHHHHhhhhcC-CCcchHHHHHHHhhCCCCCCCC---------hHHHHHHHHcccccchHHHHHhhh
Q psy7828         212 TLGEKVLNSKH--APVAQEFLKKG-SPRCLRGKIWCQVLGSEATPDN---------SKYFEQLKSSVLTYDLLIDKLTIK  279 (503)
Q Consensus       212 ~~~~~vl~~~~--~~~l~~l~r~G-IP~~lR~~VW~~LLg~~~~~~~---------~~~Ye~L~~~~~~~~~~~d~lI~k  279 (503)
                      +..+++|++..  ..++++++++| ||+.+|+.||++|+|+.+...+         ++.|+.|.++         ..+.+
T Consensus        27 ~~~~~ll~~~~~d~~~L~~~~~~g~IP~~~R~~vWklLlGylP~~~~~~~~~l~~kr~eY~~l~~~---------~~~~r   97 (294)
T 3qwl_A           27 KSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHA---------LKVVR   97 (294)
T ss_dssp             HHHHHHTTSSBCCHHHHHHHHHHSCCCHHHHHHHHHHHTTSSCSBGGGHHHHHHHHHHHHHHHHHH---------HHHTT
T ss_pred             HHHHHHhcCCCCCHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHHHHHHh---------hhhhh
Confidence            34566777654  78999999999 9999999999999999887543         2556555543         12234


Q ss_pred             ccCCcCCCCCCCchhhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCccccchHHHHHHHH
Q psy7828         280 DVQLTASNDDQYFVFEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFHGFTMYATPFC  359 (503)
Q Consensus       280 Dv~RT~~~d~~yf~f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~qGm~~iaapLl  359 (503)
                      +|++..       |+...+.+   .|     +.+.-         ....+        ..+++..  ++|||+.|||+++
T Consensus        98 ~I~~~t-------P~~~vfl~---~~-----~~~~~---------~l~~~--------~~~~~~~--~~~~~~~Iaa~ll  143 (294)
T 3qwl_A           98 FVSDAT-------PQAEVYLR---MY-----QLESG---------KLPRS--------PSFPLEP--DDEVFLAIAKAME  143 (294)
T ss_dssp             SCCTTS-------CHHHHHHH---HH-----HHHHT---------CCCSS--------TTSCCCH--HHHHHHHHHHHHH
T ss_pred             hhhccC-------chHHHHHH---HH-----Hcccc---------ccccc--------ccCCccc--chhhHHHHHHHHH
Confidence            444431       23222221   11     01100         00000        0123332  5689999999999


Q ss_pred             HhccChhHHHHHHHHHHHHhhcccCCCCcChHhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCC
Q psy7828         360 YLYDDVISLYFTFRAFYLRYFYHLHQVSSNEQGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLP  439 (503)
Q Consensus       360 ~l~~dEedaFw~f~~L~~~~~~~l~~~~~~~~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp  439 (503)
                      +++++|+||||||+++|++.  +.+|..+. +|+..   .++.||+.++|+|++||+++|+.+.+++.+||+|+|++++|
T Consensus       144 ~l~~~E~dAFW~f~~Lm~~l--~~~f~~~~-~gl~~---~l~~LL~~~dP~L~~HL~~~~i~~~~~~~rWfl~lF~~~~p  217 (294)
T 3qwl_A          144 EMVEDSVDCYWITRRFVNQL--NTKYRDSL-PQLPK---AFEQYLNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLP  217 (294)
T ss_dssp             HHCCSHHHHHHHHHHHHHHH--HTTTTTTG-GGHHH---HHHHHHHHHCHHHHHHHHHTTCGGGSCHHHHHTSTTTTTSC
T ss_pred             HHhCCHHHHHHHHHHHHHHH--HHhhCCCh-hHHHH---HHHHHHHHHHHHHHHHHHHCCCCchhHHHHHHHHHhccCCC
Confidence            99999999999999999996  44666554 67654   46999999999999999999999888888999999999999


Q ss_pred             hhhHHHHHHHHHhcCCchHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHhcccCCC
Q psy7828         440 PDQILYLWDLILAYDSLEIISILAVAILSFRRENLMQVDTLQNVEVGYEILYGRY  494 (503)
Q Consensus       440 ~~~vLrIWD~~l~~~~~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~~ls~~~  494 (503)
                      ++.++||||.+|+ +|.++++++|+|||+.++++||++++.++++.+|+++|...
T Consensus       218 ~~~vlRlWD~~~~-~~~~~l~~valAiL~~~r~~Ll~~~~~~~il~~Lq~lp~~d  271 (294)
T 3qwl_A          218 ESSLQRVWDKVVS-GSCKILVFVAVEILLTFKIKVMALNSAEKITKFLENIPQDS  271 (294)
T ss_dssp             HHHHHHHHHHHHT-TCSTHHHHHHHHHHHHTHHHHHHCCSHHHHHHHHTTCCSTT
T ss_pred             HHHHHHHHHHHHh-CCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHcCCccc
Confidence            9999999999999 88899999999999999999999998899999999999765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	503
d1fkma2	188	a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {	6e-12

>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 188

class: All alpha proteins
fold: Left-handed superhelix
superfamily: Ypt/Rab-GAP domain of gyp1p
family: Ypt/Rab-GAP domain of gyp1p
domain: Ypt/Rab-GAP domain of gyp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.1 bits (150), Expect = 6e-12
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 392 GILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLIL 451
           GIL       +L++R +  L+ HF+  H+  I+  F+W+            ++ +WD  L
Sbjct: 4   GILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYL 63

Query: 452 AYDSLEII 459
           +  S E+ 
Sbjct: 64  SETSQEVT 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	503
d1fkma1	194	Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccha	99.83
d1fkma2	188	Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccha	99.71

>d1fkma1 a.69.2.1 (A:249-442) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: Left-handed superhelix
superfamily: Ypt/Rab-GAP domain of gyp1p
family: Ypt/Rab-GAP domain of gyp1p
domain: Ypt/Rab-GAP domain of gyp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=9.1e-21  Score=177.60  Aligned_cols=142  Identities=16%  Similarity=0.239  Sum_probs=101.7

Q ss_pred             HHHHHHHHHhcCCC---hHHHHhhhhcCCCcchHHHHHHHhhCCCCCCCC---------hHHHHHHHHccc----ccchH
Q psy7828         209 ERITLGEKVLNSKH---APVAQEFLKKGSPRCLRGKIWCQVLGSEATPDN---------SKYFEQLKSSVL----TYDLL  272 (503)
Q Consensus       209 er~~~~~~vl~~~~---~~~l~~l~r~GIP~~lR~~VW~~LLg~~~~~~~---------~~~Ye~L~~~~~----~~~~~  272 (503)
                      +|+..++.++....   ..++++++++|||+++|+.||+.++|+.+....         ...|..+.....    ..+..
T Consensus         5 ~~i~~~~~~l~~~~~i~~~~lr~l~~~Gip~~lR~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~   84 (194)
T d1fkma1           5 QRISKFDNILKDKTIINQQDLRQISWNGIPKIHRPVVWKLLIGYLPVNTKRQEGFLQRKRKEYRDSLKHTFSDQHSRDIP   84 (194)
T ss_dssp             HHHHHHHHHHSSCSBCCHHHHHHHHTTCCCGGGHHHHHHHHTTCSCSBGGGHHHHHHHHHHHHHHHHHHTSSSSCSTHHH
T ss_pred             HHHHHHHHHhcccCCCCHHHHHHHHHcCCChHHHHHHHHHHHhhcCCchhhHHHHHHHHhhhhhhhhhhhhhcccccchH
Confidence            57777888887654   578999999999999999999999999876432         133333333211    11223


Q ss_pred             HHHHhhhccCCcCCCCCCCch---hhHHHHHHHHhhccchhhhhhhhccCCCCCCccccccccccccccccCCCCCcccc
Q psy7828         273 IDKLTIKDVQLTASNDDQYFV---FEDLLYQILLCFSRDTEILSIFEHSSASPLYGPLKNKNTNTENLVVYPPSGIIPFH  349 (503)
Q Consensus       273 ~d~lI~kDv~RT~~~d~~yf~---f~d~l~qvl~afsrd~~vl~~i~~~s~~~~~~~l~~~~~~~~~~~~~p~~G~i~~q  349 (503)
                      ..++|++||.||+|++.. |.   ..+.+.+||.||+..                               .|..|  |+|
T Consensus        85 ~~~~I~~Dv~RT~~~~~~-f~~~~~~~~L~rIL~~ya~~-------------------------------np~~g--Y~Q  130 (194)
T d1fkma1          85 TWHQIEIDIPRTNPHIPL-YQFKSVQNSLQRILYLWAIR-------------------------------HPASG--YVQ  130 (194)
T ss_dssp             HHHHHHHHGGGSSTTSGG-GGSHHHHHHHHHHHHHHHHH-------------------------------CTTTC--SCT
T ss_pred             HHHHHHHHHHhcCCcccc-cccchhHHHHHHHHHHHHHH-------------------------------CCCCC--eee
Confidence            447899999999987653 43   344566666666532                               23346  899


Q ss_pred             chHHHHHHHHHhccC----------------------------hhHHHHHHHHHHHHhhcccCCC
Q psy7828         350 GFTMYATPFCYLYDD----------------------------VISLYFTFRAFYLRYFYHLHQV  386 (503)
Q Consensus       350 Gm~~iaapLl~l~~d----------------------------EedaFw~f~~L~~~~~~~l~~~  386 (503)
                      ||+++||||++++.+                            |+||||||.++|++.  +.+|+
T Consensus       131 Gmn~i~a~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ead~F~~f~~lm~~i--~d~y~  193 (194)
T d1fkma1         131 GINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQI--TDNYI  193 (194)
T ss_dssp             THHHHHHHHHHHHHGGGSCGGGGGGTTTSCGGGTCCHHHHHHHHHHHHHHHHHHHGGG--GGGSS
T ss_pred             cchHHHHHHHHHHhhhhhhhhhhhhhhhcchhhhhhhhhhhhHHHHHHHHHHHHHHhh--hccCC
Confidence            999999999987633                            789999999999987  44553

>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: Left-handed superhelix
superfamily: Ypt/Rab-GAP domain of gyp1p
family: Ypt/Rab-GAP domain of gyp1p
domain: Ypt/Rab-GAP domain of gyp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=1.3e-17  Score=155.34  Aligned_cols=102  Identities=22%  Similarity=0.363  Sum_probs=94.1

Q ss_pred             HhHHHHHHHHHHHHHhhchHHHHHHHhcCCCcccchHHHHHHHhcCCCChhhHHHHHHHHHhcCC---------------
Q psy7828         391 QGILSLCILFHRLLQRYEPQLFLHFKTIHIHPIKIVFKWIMRCFSGHLPPDQILYLWDLILAYDS---------------  455 (503)
Q Consensus       391 ~Gi~~l~~~fe~LL~~~~P~L~~HL~~~~i~~~~~a~~WfltlFs~~lp~~~vLrIWD~~l~~~~---------------  455 (503)
                      |||...+..|+.+++.++|+||+||++.|+++..|+++||+|+|+++||++.++||||.||++++               
T Consensus         3 pGi~~~~~~l~~ll~~~dp~L~~hl~~~~i~~~~~~~rW~~~lf~~~~~~~~~~rlWD~~~~~~~~~~~~~~~~~l~~~~   82 (188)
T d1fkma2           3 PGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIK   82 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCTHHHHHHHHHTTTGGGSCHHHHHHHHHHHHHHHC---------------
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeeeHHHHHHHhhccCCHHHHHHHHHHHHhCCchhhhhhhhhhhhhhc
Confidence            79999999999999999999999999999999999999999999999999999999999998432               


Q ss_pred             -----------------------------------------------chHHHHHHHHHHHHhHHHhhCCCCHHHHHHHHh
Q psy7828         456 -----------------------------------------------LEIISILAVAILSFRRENLMQVDTLQNVEVGYE  488 (503)
Q Consensus       456 -----------------------------------------------~~il~~vAlAIL~~~~~~LL~~~~~~~i~~~L~  488 (503)
                                                                     .+++.++|+|++...|++|++ .+.++++.+|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~A~L~~~r~~Ll~-~df~~~l~~Lq  161 (188)
T d1fkma2          83 PPVTPTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLME-MDFQETITFLQ  161 (188)
T ss_dssp             ---------------------------------------------CHHHHHHHHHHHHHHHTHHHHTT-CCHHHHHHHHT
T ss_pred             cccccccccchhhhhhccccccccccccccchhhhhhcccccccccchHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHh
Confidence                                                           257889999999999999997 57899999999


Q ss_pred             cccCC
Q psy7828         489 ILYGR  493 (503)
Q Consensus       489 ~ls~~  493 (503)
                      ++|..
T Consensus       162 ~~P~~  166 (188)
T d1fkma2         162 NPPTK  166 (188)
T ss_dssp             SCSCT
T ss_pred             cCCCC
Confidence            87754