Psyllid ID: psy7866

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHccccHHcccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHccEHHHHHccccccccccHHHHHHHHcccccHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mtnfdmylGEHELLEEIQSIANKNEIWRSYIGlgyhnclvPTVIQrnlfenpgwvtqytpyqpeiAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Flexible Loop (DISEMBL)
MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Low Complexity Region (SEG)
MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Disordered region (IsUnstruct)
*****MYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLD**************
Disordered Region (DISOPRED)
******YLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Disordered Region (DISEMBL)
MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Disordered Region (DISPRO)
**N*DMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	109	2.2.26 [Sep-21-2011]
Q91W43	1025	Glycine dehydrogenase [de	yes	N/A	0.917	0.097	0.76	6e-42
P15505	1004	Glycine dehydrogenase [de	yes	N/A	0.981	0.106	0.700	4e-41
P23378	1020	Glycine dehydrogenase [de	yes	N/A	0.917	0.098	0.69	2e-38
P49361	1037	Glycine dehydrogenase [de	N/A	N/A	0.935	0.098	0.663	4e-38
O49852	1034	Glycine dehydrogenase [de	N/A	N/A	0.935	0.098	0.654	6e-38
P49362	1034	Glycine dehydrogenase [de	N/A	N/A	0.935	0.098	0.654	7e-38
O49850	1034	Glycine dehydrogenase [de	N/A	N/A	0.935	0.098	0.654	7e-38
O49954	1035	Glycine dehydrogenase [de	N/A	N/A	0.990	0.104	0.629	3e-37
Q54KM7	994	Glycine dehydrogenase [de	yes	N/A	0.917	0.100	0.67	7e-37
A0M5D4	949	Glycine dehydrogenase [de	yes	N/A	0.972	0.111	0.632	8e-37

>sp|Q91W43|GCSP_MOUSE Glycine dehydrogenase [decarboxylating], mitochondrial OS=Mus musculus GN=Gldc PE=1 SV=1

 Score =  169 bits (427), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 76/100 (76%), Positives = 90/100 (90%)

Query: 10  EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
           E+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQPE++QGR
Sbjct: 118 ENEILETLHAIASKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWVTQYTPYQPEVSQGR 177

Query: 70  LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           LESLLN+QTMVSD+TGL +ANASLLDEATAAAEAM +CHR
Sbjct: 178 LESLLNYQTMVSDITGLDMANASLLDEATAAAEAMQLCHR 217

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 4EC: .EC: 4EC: .EC: 2

>sp|P15505|GCSP_CHICK Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2

 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 91/107 (85%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
             D ++ E+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQ
Sbjct: 96  RMDDHVVENEILETLYNIASKNKIWRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQ 155

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PE++QGRLESLLN+QTMV D+TG+ VANASLLDE TAAAEAM +CHR
Sbjct: 156 PEVSQGRLESLLNYQTMVCDITGMDVANASLLDEGTAAAEAMQLCHR 202

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|P23378|GCSP_HUMAN Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 87/100 (87%)

Query: 10  EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
           E+E+L  + +I++KN+IWRSYIG+GY+NC VP  I RNL EN GW+TQYTPYQPE++QGR
Sbjct: 113 ENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGR 172

Query: 70  LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           LESLLN+QTMV D+TGL +ANASLLDE TAAAEA+ +C+R
Sbjct: 173 LESLLNYQTMVCDITGLDMANASLLDEGTAAAEALQLCYR 212

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|P49361|GCSPA_FLAPR Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1

 Score =  156 bits (394), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/107 (66%), Positives = 91/107 (85%)

Query: 2   TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPY 61
           + FD  L E +++  +Q +A+KN+I++S+IG+GY+N  VPTVI RN+ ENPGW TQYTPY
Sbjct: 122 SKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPY 181

Query: 62  QPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
           Q EIAQGRLESLLNFQTMV+DLTGL ++NASLLDE TAAAEAM++C+
Sbjct: 182 QAEIAQGRLESLLNFQTMVTDLTGLPMSNASLLDEGTAAAEAMAMCN 228

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Flaveria pringlei (taxid: 4226)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|O49852|GCSP_FLATR Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1

 Score =  155 bits (393), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 91/107 (85%)

Query: 2   TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPY 61
           + FD  L E +++  +Q +A+KN+I++S+IG+GY+N  VPTVI RN+ ENPGW TQYTPY
Sbjct: 119 SKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPY 178

Query: 62  QPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
           Q EIAQGRLESLLNFQTM++DLTGL ++NASLLDE TAAAEAM++C+
Sbjct: 179 QAEIAQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCN 225

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Flaveria trinervia (taxid: 4227)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|P49362|GCSPB_FLAPR Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1

 Score =  155 bits (392), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 91/107 (85%)

Query: 2   TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPY 61
           + FD  L E +++  +Q +A+KN+I++S+IG+GY+N  VPTVI RN+ ENPGW TQYTPY
Sbjct: 119 SKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPY 178

Query: 62  QPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
           Q EIAQGRLESLLNFQTM++DLTGL ++NASLLDE TAAAEAM++C+
Sbjct: 179 QAEIAQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCN 225

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Flaveria pringlei (taxid: 4226)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|O49850|GCSP_FLAAN Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1

 Score =  155 bits (392), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 91/107 (85%)

Query: 2   TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPY 61
           + FD  L E +++  +Q +A+KN+I++S+IG+GY+N  VPTVI RN+ ENPGW TQYTPY
Sbjct: 119 SKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPY 178

Query: 62  QPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
           Q EIAQGRLESLLNFQTM++DLTGL ++NASLLDE TAAAEAM++C+
Sbjct: 179 QAEIAQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCN 225

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Flaveria anomala (taxid: 35877)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|O49954|GCSP_SOLTU Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1

 Score =  153 bits (387), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 68/108 (62%), Positives = 91/108 (84%)

Query: 1   MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTP 60
           +  FD  L E +++E +Q++A+KN++++SYIG+GY+N  VP VI RNL ENP W TQYTP
Sbjct: 119 LPKFDSGLTESQMIEHMQNLASKNKVFKSYIGMGYYNTYVPPVILRNLLENPAWYTQYTP 178

Query: 61  YQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
           YQ EI+QGRLESLLN+QTM++DLTGL ++NASLLDE TAAAEAM++C+
Sbjct: 179 YQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCN 226

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|Q54KM7|GCSP_DICDI Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1

 Score =  152 bits (384), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 87/100 (87%)

Query: 8   LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
           +GE++LL++++ IA KN+++RS+IG+GY+  + P VIQRN+ ENPGW T YTPYQ EI+Q
Sbjct: 92  IGENQLLKDLKKIAEKNKVYRSFIGMGYYGTITPHVIQRNILENPGWYTPYTPYQAEISQ 151

Query: 68  GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSIC 107
           GRLESLLNFQTMVS+ TGL ++NASLLDEATAAAEAM +C
Sbjct: 152 GRLESLLNFQTMVSEFTGLPMSNASLLDEATAAAEAMQMC 191

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

>sp|A0M5D4|GCSP_GRAFK Glycine dehydrogenase [decarboxylating] OS=Gramella forsetii (strain KT0803) GN=gcvP PE=3 SV=1

 Score =  152 bits (383), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 86/106 (81%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N    + E++  E I+ ++ KN ++++YIGLGYH  ++P VIQRN+ ENPGW T YTPYQ
Sbjct: 49  NLPKAMSENQYAEHIKKLSEKNRVFKTYIGLGYHQAILPAVIQRNILENPGWYTAYTPYQ 108

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
            EIAQGRLE+LLNFQTMVSDLTG+ +ANASLLDE+TAAAEAM++ H
Sbjct: 109 AEIAQGRLEALLNFQTMVSDLTGMEIANASLLDESTAAAEAMALLH 154

The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

Gramella forsetii (strain KT0803) (taxid: 411154)

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
170034302	1000	glycine dehydrogenase, mitochondrial [Cu	0.981	0.107	0.775	2e-45
157105197	1005	glycine dehydrogenase [Aedes aegypti] gi	0.981	0.106	0.766	4e-45
347969678	227	AGAP003321-PA [Anopheles gambiae str. PE	0.981	0.471	0.766	3e-44
357616647	936	hypothetical protein KGM_17474 [Danaus p	1.0	0.116	0.706	4e-43
242004819	938	glycine dehydrogenase, putative [Pedicul	0.935	0.108	0.764	5e-43
91092464	987	PREDICTED: similar to CG3999 CG3999-PA [	0.935	0.103	0.745	4e-42
198450991	985	GA26699 [Drosophila pseudoobscura pseudo	0.981	0.108	0.747	1e-41
198450985	985	GA26702 [Drosophila pseudoobscura pseudo	0.981	0.108	0.747	1e-41
195143805	985	GL23685 [Drosophila persimilis] gi|19410	0.981	0.108	0.747	1e-41
148227411	1024	glycine dehydrogenase (decarboxylating)	0.981	0.104	0.728	3e-41

>gi|170034302|ref|XP_001845013.1| glycine dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167875646|gb|EDS39029.1| glycine dehydrogenase, mitochondrial [Culex quinquefasciatus]

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 96/107 (89%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N +  L EHEL+E I++IANKNE+WRSYIG+GYHNCLVP  I RN+FENPGW TQYTPYQ
Sbjct: 94  NIEDPLNEHELIERIRAIANKNEVWRSYIGMGYHNCLVPHPILRNIFENPGWTTQYTPYQ 153

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PEI+QGRLESLLNFQT+V++LTGL +ANASLLDE TAAAEAMS+CHR
Sbjct: 154 PEISQGRLESLLNFQTLVTELTGLEIANASLLDEGTAAAEAMSLCHR 200

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157105197|ref|XP_001648761.1| glycine dehydrogenase [Aedes aegypti] gi|108869068|gb|EAT33293.1| AAEL014426-PA [Aedes aegypti]

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 96/107 (89%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N +  L EHEL++ I++IANKNE+WRSYIG+GYHNCLVP  I RN+FENPGW TQYTPYQ
Sbjct: 99  NIEDPLNEHELIDRIRAIANKNEVWRSYIGMGYHNCLVPHPILRNIFENPGWTTQYTPYQ 158

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PEI+QGRLESLLNFQT+V++LTGL +ANASLLDE TAAAEAMS+CHR
Sbjct: 159 PEISQGRLESLLNFQTLVTELTGLEIANASLLDEGTAAAEAMSLCHR 205

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969678|ref|XP_319554.4| AGAP003321-PA [Anopheles gambiae str. PEST] gi|333469681|gb|EAA14630.4| AGAP003321-PA [Anopheles gambiae str. PEST]

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 94/107 (87%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N +  L EHEL+E IQ I+++NEIWRSYIG+GYHNCLVP  I RN+FENPGW TQYTPYQ
Sbjct: 95  NIEDPLNEHELIERIQRISDQNEIWRSYIGMGYHNCLVPHPILRNVFENPGWTTQYTPYQ 154

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PEI+QGRLESLLNFQT+V+DLTGL +ANASLLDE TAAAEAMS+C R
Sbjct: 155 PEISQGRLESLLNFQTLVTDLTGLEIANASLLDEGTAAAEAMSLCFR 201

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357616647|gb|EHJ70304.1| hypothetical protein KGM_17474 [Danaus plexippus]

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/109 (70%), Positives = 91/109 (83%)

Query: 1   MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTP 60
           + N    + E++L++ I+ IA  N+IWRSYIG+GYHNC VP  I RN+FENPGW TQYTP
Sbjct: 27  LMNITEPMSEYDLIKRIRKIAETNQIWRSYIGMGYHNCCVPHSIMRNMFENPGWTTQYTP 86

Query: 61  YQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           YQPE+AQGRLE LLN+QTMVSDLTGL VANASLLDE TAAAEA+S+CHR
Sbjct: 87  YQPEVAQGRLEGLLNYQTMVSDLTGLDVANASLLDEGTAAAEALSLCHR 135

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004819|ref|XP_002423274.1| glycine dehydrogenase, putative [Pediculus humanus corporis] gi|212506276|gb|EEB10536.1| glycine dehydrogenase, putative [Pediculus humanus corporis]

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 78/102 (76%), Positives = 91/102 (89%)

Query: 8   LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
           +GE+ELL+  + +A KN+IWRSYIG+GYHNC VP  I RN+FENPGW TQYTPYQPE+AQ
Sbjct: 34  IGEYELLQRSREMAEKNKIWRSYIGMGYHNCCVPHTILRNIFENPGWTTQYTPYQPEVAQ 93

Query: 68  GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           GRLESLLN+QTM+SDLTGL VANASLLDE TAAAEAM++CHR
Sbjct: 94  GRLESLLNYQTMISDLTGLEVANASLLDEGTAAAEAMTLCHR 135

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91092464|ref|XP_970082.1| PREDICTED: similar to CG3999 CG3999-PA [Tribolium castaneum] gi|270004725|gb|EFA01173.1| hypothetical protein TcasGA2_TC010496 [Tribolium castaneum]

 Score =  174 bits (442), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 76/102 (74%), Positives = 90/102 (88%)

Query: 8   LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
           +GE+EL+  I+ IA +N+IWRSYIG+GYHNC VP  I RN+FENPGW TQYTPYQPE++Q
Sbjct: 87  VGEYELINRIRKIAERNQIWRSYIGMGYHNCCVPHTIMRNIFENPGWTTQYTPYQPEVSQ 146

Query: 68  GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           GRLE LLN+QTMVSDLTGL VANASLLDE TAAAEA+S+C+R
Sbjct: 147 GRLEGLLNYQTMVSDLTGLDVANASLLDEGTAAAEALSLCYR 188

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198450991|ref|XP_002137197.1| GA26699 [Drosophila pseudoobscura pseudoobscura] gi|198131285|gb|EDY67755.1| GA26699 [Drosophila pseudoobscura pseudoobscura]

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 89/107 (83%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N D  L EHEL+  I+ I+ KNE+WRSYIG+GYHNC VP  I RN+FENPGW TQYTPYQ
Sbjct: 80  NLDKPLNEHELIRRIRDISLKNELWRSYIGMGYHNCHVPHTILRNMFENPGWTTQYTPYQ 139

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PEIAQGRLESLLN+QT+VSDLTGL VANASLLDE TAAAEAM +  R
Sbjct: 140 PEIAQGRLESLLNYQTLVSDLTGLDVANASLLDEGTAAAEAMCLSTR 186

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198450985|ref|XP_002137194.1| GA26702 [Drosophila pseudoobscura pseudoobscura] gi|198131282|gb|EDY67752.1| GA26702 [Drosophila pseudoobscura pseudoobscura]

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 89/107 (83%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N D  L EHEL+  I+ I+ KNE+WRSYIG+GYHNC VP  I RN+FENPGW TQYTPYQ
Sbjct: 80  NLDKPLNEHELIRRIRDISLKNELWRSYIGMGYHNCHVPHTILRNMFENPGWTTQYTPYQ 139

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PEIAQGRLESLLN+QT+VSDLTGL VANASLLDE TAAAEAM +  R
Sbjct: 140 PEIAQGRLESLLNYQTLVSDLTGLDVANASLLDEGTAAAEAMCLSTR 186

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195143805|ref|XP_002012887.1| GL23685 [Drosophila persimilis] gi|194101830|gb|EDW23873.1| GL23685 [Drosophila persimilis]

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 89/107 (83%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
           N D  L EHEL+  I+ I+ KNE+WRSYIG+GYHNC VP  I RN+FENPGW TQYTPYQ
Sbjct: 80  NLDKPLNEHELIRRIRDISLKNELWRSYIGMGYHNCHVPHTILRNMFENPGWTTQYTPYQ 139

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PEIAQGRLESLLN+QT+VSDLTGL VANASLLDE TAAAEAM +  R
Sbjct: 140 PEIAQGRLESLLNYQTLVSDLTGLDVANASLLDEGTAAAEAMCLSTR 186

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|148227411|ref|NP_001080141.1| glycine dehydrogenase (decarboxylating) [Xenopus laevis] gi|27503921|gb|AAH42245.1| Gldc-prov protein [Xenopus laevis]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 78/107 (72%), Positives = 91/107 (85%)

Query: 3   NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
             D  + E+E+LE +Q+IANKN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQ
Sbjct: 111 KMDDQVCENEILESLQNIANKNKIWRSYIGMGYYNCSVPQAILRNLLENAGWVTQYTPYQ 170

Query: 63  PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           PE++QGRLESLLN+QTMV DLTG+ VANASLLDE TAAAEAM +CHR
Sbjct: 171 PEVSQGRLESLLNYQTMVCDLTGMDVANASLLDEGTAAAEAMQLCHR 217

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	109
RGD|1308660	884	Gldc "glycine dehydrogenase (d	0.917	0.113	0.76	1.7e-38
MGI|MGI:1341155	1025	Gldc "glycine decarboxylase" [	0.917	0.097	0.76	2.5e-38
ZFIN|ZDB-GENE-030131-340	983	gldc "glycine dehydrogenase (d	0.917	0.101	0.74	7.7e-38
UNIPROTKB|F1NX32	912	GLDC "Glycine dehydrogenase [d	0.926	0.110	0.742	8.1e-38
FB|FBgn0037801	985	CG3999 [Drosophila melanogaste	0.981	0.108	0.719	1.3e-37
UNIPROTKB|P15505	1004	GLDC "Glycine dehydrogenase [d	0.963	0.104	0.714	1.7e-37
UNIPROTKB|F1NS43	906	GLDC "Glycine dehydrogenase [d	0.917	0.110	0.74	2.8e-37
UNIPROTKB|E1BJQ1	1020	GLDC "Uncharacterized protein"	0.917	0.098	0.73	2.9e-37
UNIPROTKB|E2R9Z7	1023	GLDC "Uncharacterized protein"	0.917	0.097	0.7	1.3e-36
UNIPROTKB|P23378	1020	GLDC "Glycine dehydrogenase [d	0.917	0.098	0.69	2.4e-35

RGD|1308660 Gldc "glycine dehydrogenase (decarboxylating)" [Rattus norvegicus (taxid:10116)]

 Score = 421 (153.3 bits), Expect = 1.7e-38, P = 1.7e-38
 Identities = 76/100 (76%), Positives = 90/100 (90%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQPE++QGR
Sbjct:   117 ENEILETLHAIASKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWVTQYTPYQPEVSQGR 176

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMVSD+TGL +ANASLLDEATAAAEAM +CHR
Sbjct:   177 LESLLNYQTMVSDITGLDMANASLLDEATAAAEAMQLCHR 216

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005960 "glycine cleavage complex" evidence=IDA

GO:0016594 "glycine binding" evidence=IDA

GO:0016829 "lyase activity" evidence=IEA

GO:0019464 "glycine decarboxylation via glycine cleavage system" evidence=IDA

GO:0019899 "enzyme binding" evidence=IPI

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IDA

MGI|MGI:1341155 Gldc "glycine decarboxylase" [Mus musculus (taxid:10090)]

 Score = 421 (153.3 bits), Expect = 2.5e-38, P = 2.5e-38
 Identities = 76/100 (76%), Positives = 90/100 (90%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQPE++QGR
Sbjct:   118 ENEILETLHAIASKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWVTQYTPYQPEVSQGR 177

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMVSD+TGL +ANASLLDEATAAAEAM +CHR
Sbjct:   178 LESLLNYQTMVSDITGLDMANASLLDEATAAAEAMQLCHR 217

GO:0003824 "catalytic activity" evidence=IEA

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005960 "glycine cleavage complex" evidence=ISO

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016594 "glycine binding" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0019464 "glycine decarboxylation via glycine cleavage system" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0046983 "protein dimerization activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

ZFIN|ZDB-GENE-030131-340 gldc "glycine dehydrogenase (decarboxylating)" [Danio rerio (taxid:7955)]

 Score = 416 (151.5 bits), Expect = 7.7e-38, P = 7.7e-38
 Identities = 74/100 (74%), Positives = 91/100 (91%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+L+ +Q IA+KN++WRSYIG+GY+NC VP VIQRNL EN GWVTQYTPYQPE++QGR
Sbjct:   120 ENEILDSLQKIASKNKMWRSYIGMGYYNCSVPPVIQRNLLENSGWVTQYTPYQPEVSQGR 179

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMV D+TG++VANASLLDE TAAAEAM +C+R
Sbjct:   180 LESLLNYQTMVCDITGMAVANASLLDEGTAAAEAMQLCNR 219

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

UNIPROTKB|F1NX32 GLDC "Glycine dehydrogenase [decarboxylating], mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 415 (151.1 bits), Expect = 8.1e-38, P = 8.1e-38
 Identities = 75/101 (74%), Positives = 89/101 (88%)

Query:     8 LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
             LGE+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQPE++Q
Sbjct:     2 LGENEILETLYNIASKNKIWRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPEVSQ 61

Query:    68 GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICH 108
             GRLESLLN+QTMV D+TG+ VANASLLDE TAAAEAM +CH
Sbjct:    62 GRLESLLNYQTMVCDITGMDVANASLLDEGTAAAEAMQLCH 102

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

FB|FBgn0037801 CG3999 [Drosophila melanogaster (taxid:7227)]

 Score = 414 (150.8 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 77/107 (71%), Positives = 89/107 (83%)

Query:     3 NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQ 62
             + D  L EHEL+  I+ I+ KN++WRSYIG+GYHNC VP  I RN+FENPGW TQYTPYQ
Sbjct:    80 DLDKPLNEHELIRRIRDISLKNQLWRSYIGMGYHNCHVPHTIIRNMFENPGWTTQYTPYQ 139

Query:    63 PEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             PEIAQGRLESLLN+QT+V+DLTGL VANASLLDE TAAAEAM +  R
Sbjct:   140 PEIAQGRLESLLNYQTLVTDLTGLDVANASLLDEGTAAAEAMCLATR 186

GO:0005960 "glycine cleavage complex" evidence=ISS

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|P15505 GLDC "Glycine dehydrogenase [decarboxylating], mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 413 (150.4 bits), Expect = 1.7e-37, P = 1.7e-37
 Identities = 75/105 (71%), Positives = 91/105 (86%)

Query:     5 DMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPE 64
             D ++ E+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQPE
Sbjct:    98 DDHVVENEILETLYNIASKNKIWRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPE 157

Query:    65 IAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             ++QGRLESLLN+QTMV D+TG+ VANASLLDE TAAAEAM +CHR
Sbjct:   158 VSQGRLESLLNYQTMVCDITGMDVANASLLDEGTAAAEAMQLCHR 202

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1NS43 GLDC "Glycine dehydrogenase [decarboxylating], mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 410 (149.4 bits), Expect = 2.8e-37, P = 2.8e-37
 Identities = 74/100 (74%), Positives = 88/100 (88%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+LE + +IA+KN+IWRSYIG+GY+NC VP  I RNL EN GWVTQYTPYQPE++QGR
Sbjct:     1 ENEILETLYNIASKNKIWRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPEVSQGR 60

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMV D+TG+ VANASLLDE TAAAEAM +CHR
Sbjct:    61 LESLLNYQTMVCDITGMDVANASLLDEGTAAAEAMQLCHR 100

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|E1BJQ1 GLDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 411 (149.7 bits), Expect = 2.9e-37, P = 2.9e-37
 Identities = 73/100 (73%), Positives = 88/100 (88%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+L  + +I+NKN+IWRSYIG+GY+NC VP  I RNL EN GW+TQYTPYQPE++QGR
Sbjct:   113 ENEILATLHAISNKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGR 172

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMV D+TGL +ANASLLDEATAAAEAM +CHR
Sbjct:   173 LESLLNYQTMVCDITGLDMANASLLDEATAAAEAMQLCHR 212

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

UNIPROTKB|E2R9Z7 GLDC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 405 (147.6 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 70/100 (70%), Positives = 89/100 (89%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+L ++ +I++KN+IWRSY+G+GY+NC VP  I RNL EN GW+TQYTPYQPE++QGR
Sbjct:   116 ENEILTKLHAISSKNQIWRSYMGMGYYNCFVPQTILRNLLENAGWITQYTPYQPEVSQGR 175

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMV D+TG+ +ANASLLDEATAAAEAM +CHR
Sbjct:   176 LESLLNYQTMVCDITGMDMANASLLDEATAAAEAMQLCHR 215

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

UNIPROTKB|P23378 GLDC "Glycine dehydrogenase [decarboxylating], mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 393 (143.4 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 69/100 (69%), Positives = 87/100 (87%)

Query:    10 EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
             E+E+L  + +I++KN+IWRSYIG+GY+NC VP  I RNL EN GW+TQYTPYQPE++QGR
Sbjct:   113 ENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGR 172

Query:    70 LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
             LESLLN+QTMV D+TGL +ANASLLDE TAAAEA+ +C+R
Sbjct:   173 LESLLNYQTMVCDITGLDMANASLLDEGTAAAEALQLCYR 212

GO:0006546 "glycine catabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004375 "glycine dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8DII3	GCSP_THEEB	1, ., 4, ., 4, ., 2	0.6931	0.8073	0.0922	yes	N/A
Q46VZ5	GCSP_CUPPJ	1, ., 4, ., 4, ., 2	0.5871	1.0	0.1116	yes	N/A
Q055P8	GCSP_LEPBL	1, ., 4, ., 4, ., 2	0.6565	0.9082	0.1026	yes	N/A
A7FF21	GCSP_YERP3	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q5FRY0	GCSP_GLUOX	1, ., 4, ., 4, ., 2	0.6078	0.9357	0.1072	yes	N/A
A0QGN2	GCSP_MYCA1	1, ., 4, ., 4, ., 2	0.63	0.9174	0.1062	yes	N/A
Q47XG2	GCSP2_COLP3	1, ., 4, ., 4, ., 2	0.67	0.9174	0.1046	yes	N/A
Q1LHM2	GCSP_RALME	1, ., 4, ., 4, ., 2	0.5779	1.0	0.1119	yes	N/A
Q04PM7	GCSP_LEPBJ	1, ., 4, ., 4, ., 2	0.6565	0.9082	0.1026	yes	N/A
Q3AUM0	GCSP_SYNS9	1, ., 4, ., 4, ., 2	0.6476	0.9266	0.1054	yes	N/A
B2K0Q3	GCSP_YERPB	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q3M9G1	GCSP_ANAVT	1, ., 4, ., 4, ., 2	0.6767	0.9082	0.1016	yes	N/A
A4TA90	GCSP_MYCGI	1, ., 4, ., 4, ., 2	0.65	0.9174	0.1050	yes	N/A
A0M5D4	GCSP_GRAFK	1, ., 4, ., 4, ., 2	0.6320	0.9724	0.1116	yes	N/A
B1JNS8	GCSP_YERPY	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q1CEZ9	GCSP_YERPN	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q8F937	GCSP_LEPIN	1, ., 4, ., 4, ., 2	0.6565	0.9082	0.1026	yes	N/A
Q28L73	GCSP_JANSC	1, ., 4, ., 4, ., 2	0.6666	0.9357	0.1081	yes	N/A
B5ZQP8	GCSP_RHILW	1, ., 4, ., 4, ., 2	0.67	0.9174	0.1048	yes	N/A
Q16AX0	GCSP_ROSDO	1, ., 4, ., 4, ., 2	0.6320	0.9724	0.1116	yes	N/A
Q6MPZ6	GCSP_BDEBA	1, ., 4, ., 4, ., 2	0.6336	0.9266	0.1054	yes	N/A
Q4K7Q8	GCSP1_PSEF5	1, ., 4, ., 4, ., 2	0.6372	0.9357	0.1072	yes	N/A
Q666R7	GCSP_YERPS	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
B2J427	GCSP_NOSP7	1, ., 4, ., 4, ., 2	0.6666	0.9082	0.1011	yes	N/A
Q54KM7	GCSP_DICDI	1, ., 4, ., 4, ., 2	0.67	0.9174	0.1006	yes	N/A
Q1CB42	GCSP_YERPA	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q1MG62	GCSP_RHIL3	1, ., 4, ., 4, ., 2	0.65	0.9174	0.1048	yes	N/A
Q7V9K4	GCSP_PROMA	1, ., 4, ., 4, ., 2	0.6868	0.9082	0.1026	yes	N/A
A5FMT0	GCSP_FLAJ1	1, ., 4, ., 4, ., 2	0.6346	0.9541	0.1095	yes	N/A
B2UNH4	GCSP_AKKM8	1, ., 4, ., 4, ., 2	0.6734	0.8990	0.1033	yes	N/A
Q8ZHI8	GCSP_YERPE	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q72VI8	GCSP_LEPIC	1, ., 4, ., 4, ., 2	0.6565	0.9082	0.1026	yes	N/A
Q91W43	GCSP_MOUSE	1, ., 4, ., 4, ., 2	0.76	0.9174	0.0975	yes	N/A
A4TIA7	GCSP_YERPP	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
A9R4K8	GCSP_YERPG	1, ., 4, ., 4, ., 2	0.62	0.9174	0.1042	yes	N/A
Q8YNF9	GCSP_NOSS1	1, ., 4, ., 4, ., 2	0.6767	0.9082	0.1007	yes	N/A
P23378	GCSP_HUMAN	1, ., 4, ., 4, ., 2	0.69	0.9174	0.0980	yes	N/A
P15505	GCSP_CHICK	1, ., 4, ., 4, ., 2	0.7009	0.9816	0.1065	yes	N/A
Q3IFW1	GCSP_PSEHT	1, ., 4, ., 4, ., 2	0.68	0.9174	0.1038	yes	N/A
Q2SFI6	GCSP_HAHCH	1, ., 4, ., 4, ., 2	0.64	0.9174	0.1041	yes	N/A
Q94B78	GCSP2_ARATH	1, ., 4, ., 4, ., 2	0.6074	0.9357	0.0983	yes	N/A
A1SY74	GCSP_PSYIN	1, ., 4, ., 4, ., 2	0.6666	0.8807	0.0993	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	109
PRK05367	954	PRK05367, PRK05367, glycine dehydrogenase; Provisi	1e-69
pfam02347	429	pfam02347, GDC-P, Glycine cleavage system P-protei	2e-62
COG0403	450	COG0403, GcvP, Glycine cleavage system protein P (	3e-60
PLN02414	993	PLN02414, PLN02414, glycine dehydrogenase (decarbo	3e-56
TIGR00461	939	TIGR00461, gcvP, glycine dehydrogenase (decarboxyl	6e-49
PRK12566	954	PRK12566, PRK12566, glycine dehydrogenase; Provisi	6e-45
cd00613	398	cd00613, GDC-P, Glycine cleavage system P-protein,	4e-43
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	1e-28

>gnl|CDD|235432 PRK05367, PRK05367, glycine dehydrogenase; Provisional

 Score =  223 bits (570), Expect = 1e-69
 Identities = 69/102 (67%), Positives = 84/102 (82%)

Query: 8   LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
           L E E L E+++IA+KN+++RSYIG GY+    P VI RN+ ENP W T YTPYQPEI+Q
Sbjct: 58  LSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQ 117

Query: 68  GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           GRLE+LLNFQTMV+DLTGL +ANASLLDEATAAAEAM++  R
Sbjct: 118 GRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR 159

Length = 954

>gnl|CDD|216983 pfam02347, GDC-P, Glycine cleavage system P-protein

 Score =  195 bits (497), Expect = 2e-62
 Identities = 68/100 (68%), Positives = 88/100 (88%)

Query: 10  EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
           E+E+L E+++IA+KN+I++S+IG+GY++ ++P VI RN+ ENP W TQYTPYQPEI+QGR
Sbjct: 49  EYEMLAELEAIASKNKIYKSFIGMGYYDTIIPAVILRNILENPEWYTQYTPYQPEISQGR 108

Query: 70  LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           LE+LLNFQTMV DLTGL VANASLLDE TAAAEAM++  R
Sbjct: 109 LEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAMALAAR 148

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalyzed by this protein is:- Glycine + lipoylprotein <=> S-aminomethyldihydrolipoylprotein + CO2. Length = 429

>gnl|CDD|223480 COG0403, GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

 Score =  190 bits (484), Expect = 3e-60
 Identities = 64/102 (62%), Positives = 81/102 (79%)

Query: 8   LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
           L E+E L E++ IA+KN+++ S+IG GY++   P VI RN+ ENP W T YTPYQPEI+Q
Sbjct: 57  LSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQ 116

Query: 68  GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           GRLE+L  FQT+V+DLTGL VANAS+LDEATAAAEAM +  R
Sbjct: 117 GRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158

Length = 450

>gnl|CDD|178035 PLN02414, PLN02414, glycine dehydrogenase (decarboxylating)

 Score =  186 bits (474), Expect = 3e-56
 Identities = 69/107 (64%), Positives = 92/107 (85%)

Query: 1   MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTP 60
           ++ +D  L E ++LE ++S+A+KN++++SYIG+GY+N  VP VI RN+ ENPGW TQYTP
Sbjct: 78  LSKYDEGLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTP 137

Query: 61  YQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSIC 107
           YQ EIAQGRLESLLN+QTM++DLTGL ++NASLLDE TAAAEAM++C
Sbjct: 138 YQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMC 184

Length = 993

>gnl|CDD|129553 TIGR00461, gcvP, glycine dehydrogenase (decarboxylating)

 Score =  165 bits (420), Expect = 6e-49
 Identities = 68/100 (68%), Positives = 83/100 (83%)

Query: 10  EHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGR 69
           E+E L  ++ IA+KN  ++SYIG+GY+  ++P VIQRNL ENPGW T YTPYQPEI+QGR
Sbjct: 48  EYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGR 107

Query: 70  LESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           LE+LLNFQT+VSDLTGL VANASLLDE TAAAEAM++   
Sbjct: 108 LEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFN 147

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment [Energy metabolism, Amino acids and amines]. Length = 939

>gnl|CDD|171585 PRK12566, PRK12566, glycine dehydrogenase; Provisional

 Score =  154 bits (390), Expect = 6e-45
 Identities = 66/102 (64%), Positives = 78/102 (76%)

Query: 8   LGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQ 67
           L E   L  ++  A +N++W S IG+GYH  + PTVI RN+ ENPGW T YTPYQPEIAQ
Sbjct: 61  LDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQ 120

Query: 68  GRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           GRLE+LLNFQ M  DLTGL +ANASLLDEATAAAEAM++  R
Sbjct: 121 GRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKR 162

Length = 954

>gnl|CDD|99737 cd00613, GDC-P, Glycine cleavage system P-protein, alpha- and beta-subunits

 Score =  144 bits (365), Expect = 4e-43
 Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 4/103 (3%)

Query: 10  EHELLEEIQSIANKNEIWR---SYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIA 66
           E E+L  ++ +A+KN+      S++G G +    P VI+RN+ EN  + T YTPYQPEI+
Sbjct: 1   ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEIS 59

Query: 67  QGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           QGRL++L   QTM+ +LTG+ VANASL DEATAAAEA  +   
Sbjct: 60  QGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAI 102

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <=> S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life. Length = 398

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score =  106 bits (267), Expect = 1e-28
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 12/109 (11%)

Query: 8   LGEHELLEEIQSIANKN---EIWRSYIGLGYHNCLVPTV----IQRNLFENPGWVTQYTP 60
           L E ELL  ++ +A KN   E + S++G G ++  +P V    I R+ F      T YTP
Sbjct: 47  LSEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEF-----YTAYTP 101

Query: 61  YQPEIAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           YQPEI+QG L+++  +QTM+ +LTG+ VANAS+ D ATA AEA  +  R
Sbjct: 102 YQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVR 150

Length = 447

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	109
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	100.0
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	100.0
PRK12566	954	glycine dehydrogenase; Provisional	100.0
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	100.0
PRK05367	954	glycine dehydrogenase; Provisional	100.0
PLN02414	993	glycine dehydrogenase (decarboxylating)	100.0
KOG2040|consensus	1001		99.97
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.97
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.96
PRK12566	954	glycine dehydrogenase; Provisional	99.96
PRK05367	954	glycine dehydrogenase; Provisional	99.95
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.93
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.89
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.73
KOG2040|consensus	1001		99.3
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	98.53
PRK13520	371	L-tyrosine decarboxylase; Provisional	96.39

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=100.00  E-value=1.1e-46  Score=313.40  Aligned_cols=108  Identities=51%  Similarity=0.795  Sum_probs=84.2

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVS   81 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~   81 (109)
                      ++||+++||.|++||+++||+||+.+++|+|+|+|+||+|++|.++|++||||+|+|||||||+|||+||+|||||+|||
T Consensus        41 ~~lp~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~  120 (429)
T PF02347_consen   41 LNLPEPLSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMIC  120 (429)
T ss_dssp             --------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999854449999999999999999999999999999999999


Q ss_pred             HhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          82 DLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        82 eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      ||||||++|+|+||||||++||++||.|
T Consensus       121 eLTGmdvaNaSlyd~atA~aEa~~ma~r  148 (429)
T PF02347_consen  121 ELTGMDVANASLYDGATAAAEAMLMAVR  148 (429)
T ss_dssp             HHHTSSEE-SEBSSCCHHHHHHHHHHHH
T ss_pred             HhhCCCccCCCCCChhHHHHHHHHHHHH
Confidence            9999999999999999999999999875

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=100.00  E-value=4.9e-45  Score=302.89  Aligned_cols=107  Identities=60%  Similarity=0.931  Sum_probs=104.2

Q ss_pred             CCCcCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHHH
Q psy7866           3 NFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSD   82 (109)
Q Consensus         3 ~LPe~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~e   82 (109)
                      .+|+++||.|++++++++++||....+|+|.|.|.||+|.||.++|.+||||||+|||||||+|||+||+|||||+|+||
T Consensus        52 ~~~~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~d  131 (450)
T COG0403          52 PLPKPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVAD  131 (450)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            57888999999999999999999899999999999999999877999999999999999999999999999999999999


Q ss_pred             hhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          83 LTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        83 ltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      |||||++|+|||||+||++||++||.|
T Consensus       132 LTGm~VANASm~DeaTAaAEAm~ma~r  158 (450)
T COG0403         132 LTGLDVANASMLDEATAAAEAMLMAKR  158 (450)
T ss_pred             HhCCCcccchhhhhHHHHHHHHHHHHH
Confidence            999999999999999999999999987

>PRK12566 glycine dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-43  Score=313.89  Aligned_cols=108  Identities=61%  Similarity=0.992  Sum_probs=105.3

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVS   81 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~   81 (109)
                      |+||+++||.|+.+|+++|++||....+|+|+|+|+||+|.||+++|++||||||+|||||||+|||+||+|||||+|||
T Consensus        55 l~lp~~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~  134 (954)
T PRK12566         55 LDLPAALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTI  134 (954)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999877999999999999999999999999999999999999


Q ss_pred             HhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          82 DLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        82 eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      ||||||++|+||||||||++||++||.|
T Consensus       135 ~LtGm~vaNASl~D~atA~aEA~~ma~~  162 (954)
T PRK12566        135 DLTGLDLANASLLDEATAAAEAMALAKR  162 (954)
T ss_pred             HHhCchhhhhhhccchhHHHHHHHHHHH
Confidence            9999999999999999999999999875

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=100.00  E-value=3.2e-41  Score=300.16  Aligned_cols=108  Identities=63%  Similarity=0.968  Sum_probs=104.3

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVS   81 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~   81 (109)
                      ++||+++||.|++||+++||+||+...+|+|.|+|+||+|.+|+++|++||||||+|||||||+|||+||+|||||+|||
T Consensus        40 l~lp~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~  119 (939)
T TIGR00461        40 LQLEAPSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVS  119 (939)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHH
Confidence            67999889999999999999999999999999999999988888899999999999999999999999999999999999


Q ss_pred             HhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          82 DLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        82 eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      ||||||++|+||||+|||++||++||.|
T Consensus       120 eLtGm~~aNaSl~d~atA~aEa~~~a~~  147 (939)
T TIGR00461       120 DLTGLPVANASLLDEGTAAAEAMALSFN  147 (939)
T ss_pred             HHHCCChhhhhccchhhHHHHHHHHHHH
Confidence            9999999999999999999999999864

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK05367 glycine dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-39  Score=289.48  Aligned_cols=108  Identities=64%  Similarity=0.987  Sum_probs=104.9

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVS   81 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~   81 (109)
                      ++||+++||.|++||+++||+||++.++|+|.|+|++|+|+||+++|++||+|||+|||||||+|||+||+|||||+|++
T Consensus        52 l~lp~~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la  131 (954)
T PRK05367         52 LDLPAALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVA  131 (954)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHH
Confidence            67998899999999999999999999999999999999999878999999999999999999999999999999999999


Q ss_pred             HhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          82 DLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        82 eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      +|||||++|+|++|++||.+||++|+.|
T Consensus       132 ~LtG~~~anaSl~d~aTAa~ea~~~a~~  159 (954)
T PRK05367        132 DLTGLEIANASLLDEATAAAEAMALAKR  159 (954)
T ss_pred             HHHCCChhhccccccHHHHHHHHHHhhh
Confidence            9999999999999999999999999864

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=100.00  E-value=1.4e-34  Score=259.08  Aligned_cols=108  Identities=63%  Similarity=1.026  Sum_probs=104.4

Q ss_pred             CCCC---cCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHH
Q psy7866           2 TNFD---MYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQT   78 (109)
Q Consensus         2 l~LP---e~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~   78 (109)
                      ++||   +++||.|++||+++||.+|+...+|+|.|+|+||.|.+|+++++++|+|+|+|||||||+|||+||+|||||+
T Consensus        76 l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt  155 (993)
T PLN02414         76 MKLSKYDEGLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQT  155 (993)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHH
Confidence            6799   7899999999999999999999999999999999999877999999999999999999999999999999999


Q ss_pred             HHHHhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          79 MVSDLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        79 ~l~eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      +||+|||||++|+|+||++||.+||++|+.|
T Consensus       156 ~ia~LtG~~~anaSL~d~aTAaaea~~~a~~  186 (993)
T PLN02414        156 MITDLTGLPMSNASLLDEGTAAAEAMAMCNN  186 (993)
T ss_pred             HHHHHhCCChhhEeecCChHHHHHHHHHHHh
Confidence            9999999999999999999999999999864

>KOG2040|consensus

Probab=99.97  E-value=1.5e-32  Score=238.46  Aligned_cols=109  Identities=65%  Similarity=1.063  Sum_probs=106.0

Q ss_pred             CCCCCcCCCHHHHHHHHHHHHhhccCCCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHH
Q psy7866           1 MTNFDMYLGEHELLEEIQSIANKNEIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMV   80 (109)
Q Consensus         1 ~l~LPe~lsE~ev~rh~~~ls~~N~~~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l   80 (109)
                      ++.+|++++|.|+++|+..+|.||....+|+|.|+|+..+|.+|.++|.++|+|+|.|||||||+|||+||.|.+||+|+
T Consensus        93 ~l~~~~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi  172 (1001)
T KOG2040|consen   93 PLKMDKPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMI  172 (1001)
T ss_pred             hhcCCCCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhh
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          81 SDLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        81 ~eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      ++|||+|++|+|+.|.+||++||+.|+.|
T Consensus       173 ~dlTGL~~aNASLLDEgTAaaEAm~l~~~  201 (1001)
T KOG2040|consen  173 TDLTGLPMANASLLDEGTAAAEAMALCNR  201 (1001)
T ss_pred             hhccCCcccchhhhccchhHHHHHHHHHh
Confidence            99999999999999999999999999875

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.97  E-value=1.1e-30  Score=233.06  Aligned_cols=102  Identities=21%  Similarity=0.274  Sum_probs=90.6

Q ss_pred             CCCcCC-----CHHHHHHHHHHHHhhccC-CCCcccCCCCCcccchhhhHHH-hcCCCccccCCCCCch-hhhhHHHHHH
Q psy7866           3 NFDMYL-----GEHELLEEIQSIANKNEI-WRSYIGLGYHNCLVPTVIQRNL-FENPGWVTQYTPYQPE-IAQGRLESLL   74 (109)
Q Consensus         3 ~LPe~l-----sE~ev~rh~~~ls~~N~~-~~~f~g~G~~~ky~P~vi~~~i-a~~~~f~t~yhPyQpe-~sQG~Lq~l~   74 (109)
                      .+|+ +     ||.|++|||++|++||++ +.+|+|+|+|+||.|.. .+.+ +++|||+| ||||||| .+||.||++|
T Consensus       457 ~~~~-~f~~~~sE~e~~r~~~~L~~kn~~~~~~fi~lGsctmk~na~-v~~l~~s~~ef~t-~hPyqPe~~sqG~lq~i~  533 (939)
T TIGR00461       457 LRNE-VFNMYHSETEMLRYLHRLESKDLALNNSMIPLGSCTMKLNAT-AEMMPITWPEFSN-IHPFQPSNQVEGYQELIA  533 (939)
T ss_pred             cCCc-ccccCCCHHHHHHHHHHHHhcCCCccccCCCCccCCCccCHH-HHHHHhcchhhcC-cCCCCchHHhHHHHHHHH
Confidence            4676 8     999999999999999997 78999999875444443 3566 99999988 9999999 8999999999


Q ss_pred             HHHHHHHHhhCCCccCCCCCChhhHHHHH-HHhhcC
Q psy7866          75 NFQTMVSDLTGLSVANASLLDEATAAAEA-MSICHR  109 (109)
Q Consensus        75 e~q~~l~eltGmd~~n~S~ydga~A~~ea-~~ma~r  109 (109)
                      |||+|||||||||  |+|+||+|+|.+|+ .+|+.|
T Consensus       534 elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~aiR  567 (939)
T TIGR00461       534 QLEKWLCSITGFD--AISLQPNSGAQGEYAGLRVIR  567 (939)
T ss_pred             HHHHHHHHHHCCC--CcccCCchHHHHHHHHHHHHH
Confidence            9999999999999  79999999999997 777765

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.96  E-value=1.4e-29  Score=211.79  Aligned_cols=102  Identities=22%  Similarity=0.301  Sum_probs=92.5

Q ss_pred             CCCcCCCHHHHHHHHHHHHhhccC-CCCcccCCC-CCcccchhhhHHHhcCCCccccCCCCCch-hhhhHHHHHHHHHHH
Q psy7866           3 NFDMYLGEHELLEEIQSIANKNEI-WRSYIGLGY-HNCLVPTVIQRNLFENPGWVTQYTPYQPE-IAQGRLESLLNFQTM   79 (109)
Q Consensus         3 ~LPe~lsE~ev~rh~~~ls~~N~~-~~~f~g~G~-~~ky~P~vi~~~ia~~~~f~t~yhPyQpe-~sQG~Lq~l~e~q~~   79 (109)
                      .+|| +||.|++|||++||+||++ |.++||+|| +|||||++ ++..+..||| ...|||||| .+||.|++|||+|+|
T Consensus        41 ~~Pe-~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~-e~~~~~~p~f-~~iHP~~pe~~vqG~l~li~~Lq~~  117 (496)
T COG1003          41 PLPE-HSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKA-EMKPATWPEF-ANIHPFQPEEQVQGYLELIYELQEW  117 (496)
T ss_pred             CCcc-ccHHHHHHHHHHHHhcccccccCccCCcccccccCchh-hcccccccch-hhcCCCCChHHHHHHHHHHHHHHHH
Confidence            4588 9999999999999999997 899999995 79999996 9999999999 679999999 599999999999999


Q ss_pred             HHHhhCCCccCCCCCChhhHHHHHHHhh
Q psy7866          80 VSDLTGLSVANASLLDEATAAAEAMSIC  107 (109)
Q Consensus        80 l~eltGmd~~n~S~ydga~A~~ea~~ma  107 (109)
                      |++|||||.++.++-.||++...++++.
T Consensus       118 L~~ITG~DavsLQP~AGAqGE~aGll~I  145 (496)
T COG1003         118 LKEITGMDAVSLQPNAGAQGEYAGLLAI  145 (496)
T ss_pred             HHHhcCCceeeccCCCCcchhhHHHHHH
Confidence            9999999997777777777777777663

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-29  Score=224.64  Aligned_cols=99  Identities=23%  Similarity=0.298  Sum_probs=92.7

Q ss_pred             CCCHHHHHHHHHHHHhhccC-CCCcccCC-CCCcccchhhhHHHhcCCCccccCCCCCc-hhhhhHHHHHHHHHHHHHHh
Q psy7866           7 YLGEHELLEEIQSIANKNEI-WRSYIGLG-YHNCLVPTVIQRNLFENPGWVTQYTPYQP-EIAQGRLESLLNFQTMVSDL   83 (109)
Q Consensus         7 ~lsE~ev~rh~~~ls~~N~~-~~~f~g~G-~~~ky~P~vi~~~ia~~~~f~t~yhPyQp-e~sQG~Lq~l~e~q~~l~el   83 (109)
                      .+||.|++|||++|++||++ +.+++++| |+|||||.. ....++||||+|. ||||| |.+||.||++||||+|||||
T Consensus       478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~-~~~p~s~~eF~t~-hPyqp~e~sQG~lq~i~elq~~l~eL  555 (954)
T PRK12566        478 HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATS-EMIPITWPEFAQL-HPFAPREQAEGYRAMIDELEAWLCAI  555 (954)
T ss_pred             CCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHH-hhhcccchhhhcC-CCCCchhhhcCHHHHHHHHHHHHHHH
Confidence            47999999999999999998 77899999 589999996 8889999999986 99999 68999999999999999999


Q ss_pred             hCCCccCCCCCChhhHHHH-HHHhhcC
Q psy7866          84 TGLSVANASLLDEATAAAE-AMSICHR  109 (109)
Q Consensus        84 tGmd~~n~S~ydga~A~~e-a~~ma~r  109 (109)
                      ||||++  |+||+|+|.+| |.+|+.|
T Consensus       556 tGmd~~--Sl~p~sGA~gE~A~Lmair  580 (954)
T PRK12566        556 TGFDAI--CMQPNSGAQGEYAGLLAIR  580 (954)
T ss_pred             HCCCeE--eecCCchHHHHHHHHHHHH
Confidence            999996  99999999999 9999865

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.95  E-value=2e-28  Score=218.83  Aligned_cols=102  Identities=25%  Similarity=0.309  Sum_probs=92.9

Q ss_pred             CCCcCC-----CHHHHHHHHHHHHhhccC-CCCcccCC-CCCcccchhhhHHHhcCCCccccCCCCCc-hhhhhHHHHHH
Q psy7866           3 NFDMYL-----GEHELLEEIQSIANKNEI-WRSYIGLG-YHNCLVPTVIQRNLFENPGWVTQYTPYQP-EIAQGRLESLL   74 (109)
Q Consensus         3 ~LPe~l-----sE~ev~rh~~~ls~~N~~-~~~f~g~G-~~~ky~P~vi~~~ia~~~~f~t~yhPyQp-e~sQG~Lq~l~   74 (109)
                      .+|+ +     ||.|++||+++|++||++ +.+++|+| |||||||++ ++.++++|||++ |||||| |.+||.||+++
T Consensus       469 ~~~~-~f~~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~-~~~~~~~~~f~~-~hP~qp~e~~qG~l~~i~  545 (954)
T PRK05367        469 LTHP-VFNRYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAA-EMIPITWPEFAN-LHPFAPAEQAAGYRELID  545 (954)
T ss_pred             cCCc-ccCCCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHH-HHHHHhCccccc-cCCCChHHHHHHHHHHHH
Confidence            3566 6     999999999999999998 88999999 589999996 899999999955 999999 79999999999


Q ss_pred             HHHHHHHHhhCCCccCCCCCChhhHHHH-HHHhhcC
Q psy7866          75 NFQTMVSDLTGLSVANASLLDEATAAAE-AMSICHR  109 (109)
Q Consensus        75 e~q~~l~eltGmd~~n~S~ydga~A~~e-a~~ma~r  109 (109)
                      |+|+|||||||||  |+|++|+++|.+| +.+|+.|
T Consensus       546 e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~a~r  579 (954)
T PRK05367        546 QLEAWLAEITGYD--AVSLQPNAGAQGEYAGLLAIR  579 (954)
T ss_pred             HHHHHHHHHHCCC--CEEECccHHHHHHHHHHHHHH
Confidence            9999999999999  6999999999999 6666654

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.93  E-value=7e-26  Score=188.33  Aligned_cols=100  Identities=24%  Similarity=0.399  Sum_probs=94.0

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccC-CCCcccCC-CCCcccchhhhHHHhcCCCccccCCCCCch-hhhhHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEI-WRSYIGLG-YHNCLVPTVIQRNLFENPGWVTQYTPYQPE-IAQGRLESLLNFQT   78 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~-~~~f~g~G-~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe-~sQG~Lq~l~e~q~   78 (109)
                      ++||+ +||.|++||+++|+++|.+ +.+|+|.| +++||+|.| ++.++++|+| ++||||||| .+||++|+++++|+
T Consensus        44 ~~~~~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i-~~~~~~~~~~-~~~tpYq~e~~sqG~lel~~~~~~  120 (481)
T PRK04366         44 PELPE-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKI-NEKVARLPGF-AELHPLQPEETVQGALELMYELQE  120 (481)
T ss_pred             CCCCC-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHH-HHHHHhCcch-hcCCCCCChhhhhHHHHHHHHHHH
Confidence            57999 9999999999999999998 78999999 789999996 8999999999 699999999 89999999999999


Q ss_pred             HHHHhhCCCccCCCCCChhhHHHHHHHh
Q psy7866          79 MVSDLTGLSVANASLLDEATAAAEAMSI  106 (109)
Q Consensus        79 ~l~eltGmd~~n~S~ydga~A~~ea~~m  106 (109)
                      ++++++|||  |++++++++|.++++.|
T Consensus       121 ~la~l~G~~--~~~l~~~~GA~a~~~~l  146 (481)
T PRK04366        121 WLKEITGMD--AVTLQPAAGAHGELTGL  146 (481)
T ss_pred             HHHHHhCCC--ceEEEeCcHHHHHHHHH
Confidence            999999999  79999999999887755

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.89  E-value=2.6e-23  Score=186.89  Aligned_cols=96  Identities=30%  Similarity=0.365  Sum_probs=86.4

Q ss_pred             CCHHHHHHHHHHHHhhccC-CCCcccCC-CCCcccchhhhHHHhcCCCccccCCCCCch-hhhhHHHHHHHHHHHHHHhh
Q psy7866           8 LGEHELLEEIQSIANKNEI-WRSYIGLG-YHNCLVPTVIQRNLFENPGWVTQYTPYQPE-IAQGRLESLLNFQTMVSDLT   84 (109)
Q Consensus         8 lsE~ev~rh~~~ls~~N~~-~~~f~g~G-~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe-~sQG~Lq~l~e~q~~l~elt   84 (109)
                      .||.|++|||++|++||++ +.+|||+| |||||||++ ++..++.|+| +..|||||+ .+||.|+.++|++++|++||
T Consensus       504 ~se~~~~r~~~~l~~~~~~~~~~~~plgsctmk~n~~~-~~~~~~~~~~-~~~hp~~p~~~~~g~~~~~~~~r~~la~i~  581 (993)
T PLN02414        504 HSEHELLRYLHRLQNKDLSLVHSMIPLGSCTMKLNATT-EMMPVTWPEF-ANIHPFAPVDQAQGYQEMFEDLGDLLCEIT  581 (993)
T ss_pred             cCHHHHHHHHHHHhhcccccccCCccCcccccccCchh-hhhhhcCcch-hhcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            6999999999999999998 89999999 579999996 9999999999 789999998 69999999999999999999


Q ss_pred             CCCccCCCCCChhhHHHH-HHHhh
Q psy7866          85 GLSVANASLLDEATAAAE-AMSIC  107 (109)
Q Consensus        85 Gmd~~n~S~ydga~A~~e-a~~ma  107 (109)
                      |+|.  +++.+.+||.+| |.+++
T Consensus       582 g~~~--v~f~pnaga~ge~a~~~v  603 (993)
T PLN02414        582 GFDS--FSLQPNAGAAGEYAGLMV  603 (993)
T ss_pred             CCCe--EEEcCCCcHHHHHHHHHH
Confidence            9977  667777777776 44444

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.73  E-value=1.1e-17  Score=136.02  Aligned_cols=106  Identities=41%  Similarity=0.671  Sum_probs=97.8

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccC---CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEI---WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQT   78 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~---~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~   78 (109)
                      ++||++.||.++.+|+++++++|..   +..++|.|++++++|.+ ++.++.+++|+++|+||||+.+||.++++.|+++
T Consensus        41 ~~lp~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~-~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~  119 (447)
T PRK00451         41 LDLPPGLSEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAV-VDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQT  119 (447)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHH-HHHHHhchhHHHhcCCCCCccchHHHHHHHHHHH
Confidence            4699989999999999999988864   56678999999999997 6899999999999999999999999999999999


Q ss_pred             HHHHhhCCCccCCCCCChhhHHHHHHHhhc
Q psy7866          79 MVSDLTGLSVANASLLDEATAAAEAMSICH  108 (109)
Q Consensus        79 ~l~eltGmd~~n~S~ydga~A~~ea~~ma~  108 (109)
                      ++++++|++..+..+.+|+++..+++++++
T Consensus       120 ~la~l~g~~~~~v~~~~g~t~~~~~~~~a~  149 (447)
T PRK00451        120 MICELTGMDVANASMYDGATALAEAALMAV  149 (447)
T ss_pred             HHHHHhCCCcceEEecCcHHHHHHHHHHHH
Confidence            999999999999999999999999998875

>KOG2040|consensus

Probab=99.30  E-value=1e-12  Score=115.50  Aligned_cols=94  Identities=21%  Similarity=0.274  Sum_probs=76.6

Q ss_pred             CHHHHHHHHHHHHhhccC-CCCcccCCC-CCcccchhhhHHHhcCCCccccCCCCCch-hhhhHHHHHHHHHHHHHHhhC
Q psy7866           9 GEHELLEEIQSIANKNEI-WRSYIGLGY-HNCLVPTVIQRNLFENPGWVTQYTPYQPE-IAQGRLESLLNFQTMVSDLTG   85 (109)
Q Consensus         9 sE~ev~rh~~~ls~~N~~-~~~f~g~G~-~~ky~P~vi~~~ia~~~~f~t~yhPyQpe-~sQG~Lq~l~e~q~~l~eltG   85 (109)
                      ||.+++|.+.+|-+|..+ ..+++|+|+ +||-|-.. --.=+..|+| ++.|||+|+ -+||--|.+-|++.+||+|||
T Consensus       519 SEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNstt-EmmPiTwp~f-anIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG  596 (1001)
T KOG2040|consen  519 SETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNSTT-EMMPITWPEF-ANIHPFAPVEQAQGYQQLFTELEKDLCEITG  596 (1001)
T ss_pred             cHHHHHHHHHHhhccchhhhhhcccccceeeeccccc-eeccccchhh-ccCCCCCchHHHhhHHHHHHHHHHHhheeec
Confidence            999999999999888777 678999995 79999874 3334678999 789999997 599999999999999999999


Q ss_pred             CCccCCCCCChhhHHHHHH
Q psy7866          86 LSVANASLLDEATAAAEAM  104 (109)
Q Consensus        86 md~~n~S~ydga~A~~ea~  104 (109)
                      .|.+...+-.||.+...+.
T Consensus       597 ~D~~s~QPNsGA~GEYaGL  615 (1001)
T KOG2040|consen  597 FDSFSLQPNSGAQGEYAGL  615 (1001)
T ss_pred             ccceeecCCCCcccchhhH
Confidence            9995555555554444343

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=98.53  E-value=4.7e-07  Score=71.84  Aligned_cols=96  Identities=48%  Similarity=0.646  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHhhccC-CCCcccCC--CCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHHHhhCC
Q psy7866          10 EHELLEEIQSIANKNEI-WRSYIGLG--YHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGL   86 (109)
Q Consensus        10 E~ev~rh~~~ls~~N~~-~~~f~g~G--~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~eltGm   86 (109)
                      |.||+||+.+++++|.. +.+.+++|  ...|=.|.+ .+.++..-...+.|+||.|..++|..+..-++.+.++++.|.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~   79 (398)
T cd00613           1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAV-IKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGM   79 (398)
T ss_pred             CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHH-HHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence            56999999999999987 44434444  567888887 455443322346799999888999999999999999999999


Q ss_pred             CccCCCCCChhhHHHHHHHh
Q psy7866          87 SVANASLLDEATAAAEAMSI  106 (109)
Q Consensus        87 d~~n~S~ydga~A~~ea~~m  106 (109)
                      +..+..+..+++..++++.+
T Consensus        80 ~~~~v~~~~~g~~~~~~~~~   99 (398)
T cd00613          80 DVANASLQDEATAAAEAAGL   99 (398)
T ss_pred             CccceeccCchHHHHHHHHH
Confidence            86566667766656665544

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=96.39  E-value=0.011  Score=46.18  Aligned_cols=91  Identities=18%  Similarity=0.172  Sum_probs=62.7

Q ss_pred             CCHHHHHHHHHHHHhhccCCCCcccCCC-CCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHHHhhCC
Q psy7866           8 LGEHELLEEIQSIANKNEIWRSYIGLGY-HNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSDLTGL   86 (109)
Q Consensus         8 lsE~ev~rh~~~ls~~N~~~~~f~g~G~-~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~eltGm   86 (109)
                      .||.|++|.++++++++.....|  +|+ +.+-.|.+ .+.+..   ++.. .+..+..-+|..+..-++.++|+++.|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~a~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~g~   74 (371)
T PRK13520          2 LSEEEILEELEEYRSEDLKYERI--LSSMCTEPHPIA-RKAHEM---FLET-NLGDPGLFPGTAKLEEEAVEMLGELLHL   74 (371)
T ss_pred             CCHHHHHHHHHHHHhcCCCHHHe--eeeeecCchHHH-HHHHHH---HHhc-CCCCcccCccHHHHHHHHHHHHHHHhCC
Confidence            68999999999999999885566  554 55567885 455532   2221 1112222357788888999999999999


Q ss_pred             CccCCCCCChhhHHHHHHH
Q psy7866          87 SVANASLLDEATAAAEAMS  105 (109)
Q Consensus        87 d~~n~S~ydga~A~~ea~~  105 (109)
                      +..+.-+..|++....+++
T Consensus        75 ~~~~~~~~~ggt~a~~~a~   93 (371)
T PRK13520         75 PDAYGYITSGGTEANIQAV   93 (371)
T ss_pred             CCCCeEEecCcHHHHHHHH
Confidence            8766666677765555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	109
1wyt_A	438	Crystal Structure Of Glycine Decarboxylase (P-Prote		1e-15

>pdb|1WYT|A Chain A, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of The Glycine Cleavage System, In Apo Form Length = 438

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/103 (40%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 8   LGEHELLEEIQSIANKN-EIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIA 66
           L E ++LEE++ +A +N    ++++G G  +  VP V+Q  L     ++T YTPYQPE++
Sbjct: 45  LPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQA-LAARGEFLTAYTPYQPEVS 103
Query: 67  QGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           QG L++   +QTM+++L GL +ANAS+ D ATA AE + +  R
Sbjct: 104 QGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR 146

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	109
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	2e-59

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A* Length = 438

 Score =  187 bits (476), Expect = 2e-59
 Identities = 41/103 (39%), Positives = 68/103 (66%), Gaps = 2/103 (1%)

Query: 8   LGEHELLEEIQSIANKN-EIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIA 66
           L E ++LEE++ +A +N    ++++G G  +  VP V+ + L     ++T YTPYQPE++
Sbjct: 45  LPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVV-QALAARGEFLTAYTPYQPEVS 103

Query: 67  QGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           QG L++   +QTM+++L GL +ANAS+ D ATA AE + +  R
Sbjct: 104 QGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR 146

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	109
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.84
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.64
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	98.03
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	98.01
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	97.86
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	96.56
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	95.89
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	95.76
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	95.72
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	95.65
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	92.04
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	91.83

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.84  E-value=6.6e-21  Score=151.00  Aligned_cols=106  Identities=38%  Similarity=0.614  Sum_probs=99.6

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccC-CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEI-WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMV   80 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~-~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l   80 (109)
                      ++||+++||.++.+|+.+++++|.. ..+|+|.|.|++++|++ +++++++++|++.|+||||+.+||.++.+.++++++
T Consensus        39 ~~lp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p~~-v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l  117 (438)
T 1wyu_A           39 IDLPEPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPV-VQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMI  117 (438)
T ss_dssp             CCCCCCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHH-HHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCcCccccccCCCccCCcCcHH-HHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHH
Confidence            5799889999999999999999987 67899999999999997 699998999999999999999999999999999999


Q ss_pred             HHhhCCCccCCCCCChhhHHHHHHHhhc
Q psy7866          81 SDLTGLSVANASLLDEATAAAEAMSICH  108 (109)
Q Consensus        81 ~eltGmd~~n~S~ydga~A~~ea~~ma~  108 (109)
                      ++++|++..|+++.+|+|+.+|++.+++
T Consensus       118 a~~~g~~~~~i~~~~g~taa~ea~~~a~  145 (438)
T 1wyu_A          118 AELAGLEIANASMYDGATALAEGVLLAL  145 (438)
T ss_dssp             HHHHTSSEECSCBSSHHHHHHHHHHHHH
T ss_pred             HHHhCCCccceEEeCcHHHHHHHHHHHH
Confidence            9999999999999999999999998874

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.64  E-value=1.2e-15  Score=122.86  Aligned_cols=95  Identities=19%  Similarity=0.263  Sum_probs=80.0

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccC-CCCcccC-CCCCcccchhhhHHHhcCCCccccCCCCCch-hhhhHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEI-WRSYIGL-GYHNCLVPTVIQRNLFENPGWVTQYTPYQPE-IAQGRLESLLNFQT   78 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~-~~~f~g~-G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe-~sQG~Lq~l~e~q~   78 (109)
                      ++|| ++||.|++||+++|+++|.. +.+++++ |+++|++|++ ++.++++  | +.||||||+ .+||.++.+.++++
T Consensus        40 ~~lp-~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v-~~~~~~~--~-~~~~~~~~~~~~~g~~~l~~~l~~  114 (474)
T 1wyu_B           40 PRLP-EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKL-HEEAARL--F-ADLHPYQDPRTAQGALRLMWELGE  114 (474)
T ss_dssp             CCCC-CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHH-HHHHHHT--T-SSCCTTSCGGGCHHHHHHHHHHHH
T ss_pred             CCCC-CCCHHHHHHHHHHHHhCCCCcccCccccccccccCCHHH-HHHHHHH--H-HhcCCCCchhhChHHHHHHHHHHH
Confidence            5799 59999999999999999986 4444433 6899999996 7999987  4 789999998 79999999999999


Q ss_pred             HHHHhhCCCccCCCCCChhhHHHHH
Q psy7866          79 MVSDLTGLSVANASLLDEATAAAEA  103 (109)
Q Consensus        79 ~l~eltGmd~~n~S~ydga~A~~ea  103 (109)
                      ++++++|++.  ..+++++++.+..
T Consensus       115 ~la~~~g~~~--~~~~~~ggt~a~~  137 (474)
T 1wyu_B          115 YLKALTGMDA--ITLEPAAGAHGEL  137 (474)
T ss_dssp             HHHHHHTCSE--EECCCSSHHHHHH
T ss_pred             HHHHHHCCCc--eeecChHHHHHHH
Confidence            9999999997  4667666655543

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=98.03  E-value=4.4e-06  Score=67.63  Aligned_cols=96  Identities=11%  Similarity=0.081  Sum_probs=67.4

Q ss_pred             CCCC-cCCCHHHHHHHHHHHHhhccC--CCCcccCCCCCcccchhhhHHHhcCCCccccC-CCC--CchhhhhHHHHHHH
Q psy7866           2 TNFD-MYLGEHELLEEIQSIANKNEI--WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQY-TPY--QPEIAQGRLESLLN   75 (109)
Q Consensus         2 l~LP-e~lsE~ev~rh~~~ls~~N~~--~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~y-hPy--Qpe~sQG~Lq~l~e   75 (109)
                      .+|| ++.++.++++++.++...|..  ...|++...+. -.|..+..      +|++++ .|+  +.+.+++..+...+
T Consensus        80 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~------~~l~~~~n~~~~~~~~s~~~~~le~~  152 (515)
T 2jis_A           80 LELRSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSG-LDPHALAG------RIITESLNTSQYTYEIAPVFVLMEEE  152 (515)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHHSCCTTSTTEESSSCCC-CCHHHHHH------HHHHHHHCCCTTCTTTCHHHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCeEEEeeCC-CCHHHHHH------HHHHHHhccCCCchhhchHHHHHHHH
Confidence            4678 678999999999999888753  33444332221 12222222      344443 454  56789999999999


Q ss_pred             HHHHHHHhhCCCccCCCCCChhhHHHHHH
Q psy7866          76 FQTMVSDLTGLSVANASLLDEATAAAEAM  104 (109)
Q Consensus        76 ~q~~l~eltGmd~~n~S~ydga~A~~ea~  104 (109)
                      ++++|++++|++..+..+.+|+|.....+
T Consensus       153 ~~~~la~l~g~~~~~~~~t~ggtea~~~a  181 (515)
T 2jis_A          153 VLRKLRALVGWSSGDGIFCPGGSISNMYA  181 (515)
T ss_dssp             HHHHHHHHHTCSSCEEEEESSHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeEEcCCcHHHHHHH
Confidence            99999999999988889999988554433

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=98.01  E-value=1.3e-05  Score=63.86  Aligned_cols=104  Identities=6%  Similarity=-0.026  Sum_probs=70.6

Q ss_pred             CCC-cCCCHHHHHHHHHHHHhh--ccC-CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHH
Q psy7866           3 NFD-MYLGEHELLEEIQSIANK--NEI-WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQT   78 (109)
Q Consensus         3 ~LP-e~lsE~ev~rh~~~ls~~--N~~-~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~   78 (109)
                      +|| +++++.++.+++.++...  +.. ..+.+.++.|... |.+ .+.+.+.-+.+...+|++++.++|..+.-.++++
T Consensus        37 ~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  114 (497)
T 3mc6_A           37 QLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGG-DDL-IHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVS  114 (497)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCC-HHH-HHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCc-hHH-HHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHH
Confidence            466 467999999999999874  322 2223333333221 443 3444332222244678999999999999999999


Q ss_pred             HHHHhhCCC--ccCCCCCChhhHHHHHHHhhc
Q psy7866          79 MVSDLTGLS--VANASLLDEATAAAEAMSICH  108 (109)
Q Consensus        79 ~l~eltGmd--~~n~S~ydga~A~~ea~~ma~  108 (109)
                      +++++.|++  ..+..+..|++.....+++++
T Consensus       115 ~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~  146 (497)
T 3mc6_A          115 MVLRMFNAPSDTGCGTTTSGGTESLLLACLSA  146 (497)
T ss_dssp             HHHHHTTCCTTTCCEEEESSHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence            999999999  566778888887666665543

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=97.86  E-value=8.4e-05  Score=58.66  Aligned_cols=96  Identities=10%  Similarity=0.000  Sum_probs=67.9

Q ss_pred             CCCC-cCCCHHHHHHHHHHHHhhccC----CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHH
Q psy7866           2 TNFD-MYLGEHELLEEIQSIANKNEI----WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNF   76 (109)
Q Consensus         2 l~LP-e~lsE~ev~rh~~~ls~~N~~----~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~   76 (109)
                      ++|| +++++.++.+++.++..+|..    ..+|.+  ++++  |.+ .+.+.+-   +. -.+++++.++|..+...++
T Consensus        16 ~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~--~~v-~e~~~~a---~~-~~~~~~~~~~~~~~l~~~~   86 (452)
T 2dgk_A           16 KRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQ--TWDD--ENV-HKLMDLS---IN-KNWIDKEEYPQSAAIDLRC   86 (452)
T ss_dssp             CSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC--CCCC--HHH-HHHHHHT---TT-CBTTCTTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC--CCch--HHH-HHHHHHH---hc-cCCCChhhChhHHHHHHHH
Confidence            3678 778999999999999876653    223443  3333  454 5665531   11 1356667789999999999


Q ss_pred             HHHHHHhhCCCccC-----CCCCChhhHHHHHHHh
Q psy7866          77 QTMVSDLTGLSVAN-----ASLLDEATAAAEAMSI  106 (109)
Q Consensus        77 q~~l~eltGmd~~n-----~S~ydga~A~~ea~~m  106 (109)
                      +++++++.|++..+     ..+..|++.....+++
T Consensus        87 ~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~  121 (452)
T 2dgk_A           87 VNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGM  121 (452)
T ss_dssp             HHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHH
Confidence            99999999999876     7888888855444433

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=96.56  E-value=0.0022  Score=51.35  Aligned_cols=97  Identities=9%  Similarity=-0.004  Sum_probs=58.4

Q ss_pred             CCC-cCCCHHHHHHHHHHHHhhccC--CCCcccCCCCCcccchhhhHHHhcCCCccccC-CCCC--chhhhhHHHHHHHH
Q psy7866           3 NFD-MYLGEHELLEEIQSIANKNEI--WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQY-TPYQ--PEIAQGRLESLLNF   76 (109)
Q Consensus         3 ~LP-e~lsE~ev~rh~~~ls~~N~~--~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~y-hPyQ--pe~sQG~Lq~l~e~   76 (109)
                      +|| ++.++.++++++.++...+..  ...|++...+. -.|..+..      ++++++ .|.+  .+.+.+.-+.-.+.
T Consensus        65 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~------~~l~~~~n~~~~~~~~~~~~~~le~~~  137 (504)
T 2okj_A           65 ELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTG-LDIIGLAG------EWLTSTANTNMFTYEIAPVFVLMEQIT  137 (504)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHTSCCTTCTTEESSSSCC-CCHHHHHH------HHHHHHHCCBSSCTTTCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhhccCCCCCCCEEEEccCC-CCHHHHHH------HHHHHhhccCCCchhhChHHHHHHHHH
Confidence            577 667999999999998876653  34454332211 11222111      334432 4433  34455554444555


Q ss_pred             HHHHHHhhCCC--ccCCCCCChhhHHHHHHHh
Q psy7866          77 QTMVSDLTGLS--VANASLLDEATAAAEAMSI  106 (109)
Q Consensus        77 q~~l~eltGmd--~~n~S~ydga~A~~ea~~m  106 (109)
                      .++++++.|++  ..+..+..|+|.....++.
T Consensus       138 ~~~la~~~g~~~~~~~~~~t~ggtea~~~al~  169 (504)
T 2okj_A          138 LKKMREIVGWSSKDGDGIFSPGGAISNMYSIM  169 (504)
T ss_dssp             HHHHHHHHTCCSSSCEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHH
Confidence            69999999999  6677888888855544433

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=95.89  E-value=0.0086  Score=48.65  Aligned_cols=99  Identities=7%  Similarity=-0.082  Sum_probs=59.3

Q ss_pred             CCCCc-CCCHHHHHHHHHHHHhhccC--CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCc--hhhhhHHHHHHHH
Q psy7866           2 TNFDM-YLGEHELLEEIQSIANKNEI--WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQP--EIAQGRLESLLNF   76 (109)
Q Consensus         2 l~LPe-~lsE~ev~rh~~~ls~~N~~--~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQp--e~sQG~Lq~l~e~   76 (109)
                      +++|+ +.++.+|++++.++...+..  ..+|+|.-...--.|.++.|.+.+      ++.+.+.  +.+.+.-+.-.+.
T Consensus        67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~f~~~~~~~~~~~~~~~e~l~~------~~~~~~~~~~~~p~~~~le~~~  140 (511)
T 3vp6_A           67 LELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTS------TANTNMFTYEIAPVFVLMEQIT  140 (511)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHTSCCTTSTTEESSSSCCCCHHHHHHHHHHH------HHCCCSSCTTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCceEeecCCCcHHHHHHHHHHH------HhccCCCCcccCchHHHHHHHH
Confidence            35776 67999999999999877753  445655332221223332333332      1122111  2456666666778


Q ss_pred             HHHHHHhhCCCc--cCCCCCChhhHHHHHHHh
Q psy7866          77 QTMVSDLTGLSV--ANASLLDEATAAAEAMSI  106 (109)
Q Consensus        77 q~~l~eltGmd~--~n~S~ydga~A~~ea~~m  106 (109)
                      ..|++++.|++.  ....+..|+|.....+++
T Consensus       141 ~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~  172 (511)
T 3vp6_A          141 LKKMREIVGWSSKDGDGIFSPGGAISNMYSIM  172 (511)
T ss_dssp             HHHHHHHHTCCSSSCEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCceEECCchHHHHHHHHH
Confidence            889999999994  455566676665544433

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=95.76  E-value=0.0083  Score=47.60  Aligned_cols=88  Identities=9%  Similarity=-0.024  Sum_probs=51.2

Q ss_pred             CC-cCCCHHHHHHHHHHHHhhccC---CCCcccCCCCCcccchhhhHHHhcCCCccccC-CCCCchhhhhHHHHHH--HH
Q psy7866           4 FD-MYLGEHELLEEIQSIANKNEI---WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQY-TPYQPEIAQGRLESLL--NF   76 (109)
Q Consensus         4 LP-e~lsE~ev~rh~~~ls~~N~~---~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~y-hPyQpe~sQG~Lq~l~--e~   76 (109)
                      +| ++.++.++++++.++...|..   ...|+|--...--.|.++.+.       ++++ .|++....++.....+  +.
T Consensus        46 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~le~~~  118 (486)
T 1js3_A           46 APQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADM-------LCGAIGCIGFSWAASPACTELETVM  118 (486)
T ss_dssp             CCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHH-------HHHHHCCCCSSGGGCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHH-------HHHHhCcCccccccChhHHHHHHHH
Confidence            45 456999999999997766653   334544211111123332333       3333 5666554444444444  46


Q ss_pred             HHHHHHhhCCCccC---------CCCCChhh
Q psy7866          77 QTMVSDLTGLSVAN---------ASLLDEAT   98 (109)
Q Consensus        77 q~~l~eltGmd~~n---------~S~ydga~   98 (109)
                      ..++++++|++..+         ..+.+|+|
T Consensus       119 ~~~la~l~g~~~~~~~~~~~~~~~v~t~ggT  149 (486)
T 1js3_A          119 MDWLGKMLQLPEAFLAGEAGEGGGVIQGSAS  149 (486)
T ss_dssp             HHHHHHHTTCCGGGCCTTTCSCEEEEESCHH
T ss_pred             HHHHHHHhCCCchhcccCCCCCCeEEcCCcH
Confidence            67999999999643         45677777

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=95.72  E-value=0.087  Score=39.05  Aligned_cols=101  Identities=16%  Similarity=0.125  Sum_probs=66.8

Q ss_pred             CCCCCc-CCCHHHHHHHHHHHHhhccC--CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHH
Q psy7866           1 MTNFDM-YLGEHELLEEIQSIANKNEI--WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQ   77 (109)
Q Consensus         1 ~l~LPe-~lsE~ev~rh~~~ls~~N~~--~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q   77 (109)
                      |=+||+ +.++.++.+++.++...+..  ...++|.+. ..-.|.+ .+.+...   +... ...+...+|.-+..-+++
T Consensus         2 ~~~lp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~v-~~a~~~~---~~~~-~~~~~~~~~~~~~~~~l~   75 (397)
T 3f9t_A            2 MRNMQEKGVSEKEILEELKKYRSLDLKYEDGNIFGSMC-SNVLPIT-RKIVDIF---LETN-LGDPGLFKGTKLLEEKAV   75 (397)
T ss_dssp             CCSCCSSCCCHHHHHHHHHHHHTTSCCGGGTCBCSCSC-CCCCTHH-HHHHHHH---TTCC-TTSGGGBHHHHHHHHHHH
T ss_pred             cccCCCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEec-CCCcHHH-HHHHHHH---Hhhc-CCCcccChhHHHHHHHHH
Confidence            345777 36999999999998866554  234555553 3345775 5666542   1111 112223457888888999


Q ss_pred             HHHHHhhCCCccCCCCCChhhHHHHHHHhh
Q psy7866          78 TMVSDLTGLSVANASLLDEATAAAEAMSIC  107 (109)
Q Consensus        78 ~~l~eltGmd~~n~S~ydga~A~~ea~~ma  107 (109)
                      ++++++.|.+..+.-+-.|++...+.++.+
T Consensus        76 ~~la~~~~~~~~~i~~~~ggt~a~~~~~~~  105 (397)
T 3f9t_A           76 ALLGSLLNNKDAYGHIVSGGTEANLMALRC  105 (397)
T ss_dssp             HHHHHHTTCTTCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCEEEecCcHHHHHHHHHH
Confidence            999999999877666777887777766554

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=95.65  E-value=0.015  Score=46.59  Aligned_cols=98  Identities=14%  Similarity=0.092  Sum_probs=63.9

Q ss_pred             CCCHHHHHHHHHHHHhhccC---CCCcccCCCCC-cccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHHHH
Q psy7866           7 YLGEHELLEEIQSIANKNEI---WRSYIGLGYHN-CLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMVSD   82 (109)
Q Consensus         7 ~lsE~ev~rh~~~ls~~N~~---~~~f~g~G~~~-ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l~e   82 (109)
                      +.++.++.+++.++...+..   ...|.|..... ...+..+.+.+..   + ....++++...+|..+.-.++.+++++
T Consensus        75 g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~p~~~~le~~l~~~la~  150 (514)
T 3mad_A           75 GLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYAL---Q-SQSNPLHPDLWPSTAKFEAEVVAMTAH  150 (514)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHH---H-TTCCTTCTTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHH---H-hhcCCcccccChHHHHHHHHHHHHHHH
Confidence            46899999999999766643   22333322221 2233332333332   2 345566767788888888999999999


Q ss_pred             hhCCCc--cCC--CCCChhhHHHHHHHhhc
Q psy7866          83 LTGLSV--ANA--SLLDEATAAAEAMSICH  108 (109)
Q Consensus        83 ltGmd~--~n~--S~ydga~A~~ea~~ma~  108 (109)
                      +.|++.  -++  -+..|++...+.++.++
T Consensus       151 ~~g~~~~~~~v~~~~t~ggt~a~~~al~a~  180 (514)
T 3mad_A          151 MLGGDAAGGTVCGTVTSGGTESLLLAMKTY  180 (514)
T ss_dssp             HTTGGGGTSCCEEEEESSHHHHHHHHHHHH
T ss_pred             HcCCCCccCCcceEEcCcHHHHHHHHHHHH
Confidence            999984  344  77778887777766554

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=92.04  E-value=0.015  Score=50.27  Aligned_cols=78  Identities=12%  Similarity=0.218  Sum_probs=55.9

Q ss_pred             CcccCCCCCcccchhhhHHHh-c-CC---CccccC--CCCCchhhh-----hHH----HHHHHHHHHHHHhhCCCccCCC
Q psy7866          29 SYIGLGYHNCLVPTVIQRNLF-E-NP---GWVTQY--TPYQPEIAQ-----GRL----ESLLNFQTMVSDLTGLSVANAS   92 (109)
Q Consensus        29 ~f~g~G~~~ky~P~vi~~~ia-~-~~---~f~t~y--hPyQpe~sQ-----G~L----q~l~e~q~~l~eltGmd~~n~S   92 (109)
                      .|...|.|.+|.|.- ...-. . .|   +|++.|  +|||+++++     |.|    +.+.++|+.++++.|.+.+ ..
T Consensus       116 ~~~~~~~~~~~~Pgh-~~g~~~~~~p~g~~~~~~~g~~~~~~di~~~~~~l~~l~~~~~~i~e~e~~lA~~~gae~~-i~  193 (730)
T 1c4k_A          116 EYVSRYLIQFDCPGH-QGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKT-YF  193 (730)
T ss_dssp             HHHTSCCCCCSSSTT-TTTTTGGGSHHHHHHHHHHCSHHHHSCCCTTSGGGCBTTTTBTHHHHHHHHHHHHTTCSEE-EE
T ss_pred             HHHhcCCcccccCcc-ccccccCCcchhhHHHhhcchhhhhHHhhhhhccCCCccCChHHHHHHHHHHHHHHCCCcE-EE
Confidence            466778888888873 21111 1 11   565555  678888777     555    7899999999999999975 56


Q ss_pred             CCChhhHHHHHHHhhc
Q psy7866          93 LLDEATAAAEAMSICH  108 (109)
Q Consensus        93 ~ydga~A~~ea~~ma~  108 (109)
                      +..|+++...++.+++
T Consensus       194 v~nGtt~an~~ai~al  209 (730)
T 1c4k_A          194 VLGGSSNANNTVTSAL  209 (730)
T ss_dssp             ESSHHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHHHHh
Confidence            7788888888777653

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=91.83  E-value=0.82  Score=36.02  Aligned_cols=88  Identities=11%  Similarity=-0.005  Sum_probs=53.5

Q ss_pred             CCC-cCCCHHHHHHHHHHHHhhccC-CCCcccCCCCCcccchhhhHHHh------------cCCCccccCCCCCch--hh
Q psy7866           3 NFD-MYLGEHELLEEIQSIANKNEI-WRSYIGLGYHNCLVPTVIQRNLF------------ENPGWVTQYTPYQPE--IA   66 (109)
Q Consensus         3 ~LP-e~lsE~ev~rh~~~ls~~N~~-~~~f~g~G~~~ky~P~vi~~~ia------------~~~~f~t~yhPyQpe--~s   66 (109)
                      +|| +++++.++.+...++...+.. +...-+.|-   +-++| .+.+.            ...+|++    .||.  .+
T Consensus        57 ~lp~~g~~~~~i~~~~~~~~~~~~~~yld~aa~~~---~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  128 (456)
T 2z67_A           57 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGE---REART-YSKIHEELSSGFCHGIGRSGNLVD----PQPKASGA  128 (456)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECSS---CCCCC-SCHHHHHHTTTCTTCBSBTTBTTS----CCTTBHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcccccccccccccc---ccccc-cccccCccccccCCCccHHHHHHh----hCcccccC
Confidence            578 678999999888887665432 222223232   22222 22222            1123322    3443  34


Q ss_pred             hhHHHHHHHHHHHHHHhhCCCccCCCCCChhhH
Q psy7866          67 QGRLESLLNFQTMVSDLTGLSVANASLLDEATA   99 (109)
Q Consensus        67 QG~Lq~l~e~q~~l~eltGmd~~n~S~ydga~A   99 (109)
                      .+.-+..-+++++++++.|.+.. +.+..|+|.
T Consensus       129 ~~~~~~~~~~~~~la~~~g~~~~-~~~t~g~te  160 (456)
T 2z67_A          129 SIMYALTNKILESFFKQLGLNVH-AIATPISTG  160 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCE-EEEESSCHH
T ss_pred             cHHHHHHHHHHHHHHHHcCCCCC-EEEeCcHHH
Confidence            56778888999999999999865 677778873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	109
d1wyua1	437	c.67.1.7 (A:1-437) Glycine dehydrogenase (decarbox	1e-18
d1wyub1	471	c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2	3e-17
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	2e-07

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]} Length = 437

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

 Score = 77.5 bits (190), Expect = 1e-18
 Identities = 41/103 (39%), Positives = 68/103 (66%), Gaps = 2/103 (1%)

Query: 8   LGEHELLEEIQSIANKN-EIWRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIA 66
           L E ++LEE++ +A +N    ++++G G  +  VP V+ + L     ++T YTPYQPE++
Sbjct: 45  LPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVV-QALAARGEFLTAYTPYQPEVS 103

Query: 67  QGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           QG L++   +QTM+++L GL +ANAS+ D ATA AE + +  R
Sbjct: 104 QGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR 146

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]} Length = 471

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

 Score = 73.3 bits (179), Expect = 3e-17
 Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 7/105 (6%)

Query: 8   LGEHELLEEIQSIANKNE-IWRSYIGLG-YHNCLVPTVIQRNLFENPGWVTQYTPYQP-E 64
           + E  L+     ++ +   +  ++  LG       P + +    E         PYQ   
Sbjct: 44  VDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHE----EAARLFADLHPYQDPR 99

Query: 65  IAQGRLESLLNFQTMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
            AQG L  +      +  LTG+          A      + I   
Sbjct: 100 TAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRA 144

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 45.3 bits (106), Expect = 2e-07
 Identities = 9/109 (8%), Positives = 29/109 (26%), Gaps = 7/109 (6%)

Query: 8   LGEHELLEEIQSIANKN-EIWRSYIGLG--YHNCLVPTVIQR--NLFENPGWVTQYTPYQ 62
           + + ++   ++ ++  + +     + +G            +         G        Q
Sbjct: 43  IDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQ 102

Query: 63  PEIAQGRLESLLNFQ--TMVSDLTGLSVANASLLDEATAAAEAMSICHR 109
           P+ +   +   L  +         GL+V   +       +        R
Sbjct: 103 PKASGASIMYALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAAR 151

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	109
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	100.0
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	100.0
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.63
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	98.54

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-44  Score=297.83  Aligned_cols=103  Identities=17%  Similarity=0.239  Sum_probs=97.0

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccC-CCCcccCC-CCCcccchhhhHHHhcCCCccccCCCCCc-hhhhhHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEI-WRSYIGLG-YHNCLVPTVIQRNLFENPGWVTQYTPYQP-EIAQGRLESLLNFQT   78 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~-~~~f~g~G-~~~ky~P~vi~~~ia~~~~f~t~yhPyQp-e~sQG~Lq~l~e~q~   78 (109)
                      ++||+ +||.|++||+++|++||.+ +.+|+|+| ||+||+|+| ++.+++   |+|+|||||| |+|||+||+||||||
T Consensus        39 l~LP~-~sE~El~r~~~~la~kN~~~~~~~~~lG~~~~hy~P~v-~~~~~~---~~TaYTPYQPaEiSQG~LQalfEfQt  113 (471)
T d1wyub1          39 PRLPE-VDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKL-HEEAAR---LFADLHPYQDPRTAQGALRLMWELGE  113 (471)
T ss_dssp             CCCCC-CCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHH-HHHHHH---TTSSCCTTSCGGGCHHHHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHHHHhCCCCccccccCCccccCccCcch-hhhHHH---HHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            68997 9999999999999999996 78999999 589999996 899986   7899999997 999999999999999


Q ss_pred             HHHHhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          79 MVSDLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        79 ~l~eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      |||||||||++|+|+||||||++||++||.|
T Consensus       114 mi~eLTGMdvaNaS~yDGatA~aeA~~ma~r  144 (471)
T d1wyub1         114 YLKALTGMDAITLEPAAGAHGELTGILIIRA  144 (471)
T ss_dssp             HHHHHHTCSEEECCCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCccccccchHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999864

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-43  Score=291.08  Aligned_cols=107  Identities=38%  Similarity=0.623  Sum_probs=102.0

Q ss_pred             CCCCcCCCHHHHHHHHHHHHhhccC-CCCcccCCCCCcccchhhhHHHhcCCCccccCCCCCchhhhhHHHHHHHHHHHH
Q psy7866           2 TNFDMYLGEHELLEEIQSIANKNEI-WRSYIGLGYHNCLVPTVIQRNLFENPGWVTQYTPYQPEIAQGRLESLLNFQTMV   80 (109)
Q Consensus         2 l~LPe~lsE~ev~rh~~~ls~~N~~-~~~f~g~G~~~ky~P~vi~~~ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~q~~l   80 (109)
                      ++||+++||.||+|||++||+||++ +++|||+|+|+||+|++ ++++++||+|+|+|||||||+|||+||+|||||+||
T Consensus        39 ~~lp~~~sE~e~~r~~~~ls~kN~~~~~~fig~G~~~~~~p~~-i~~~~~~~~~~t~ytPyqpE~sQG~Lq~l~e~q~~l  117 (437)
T d1wyua1          39 IDLPEPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPV-VQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMI  117 (437)
T ss_dssp             CCCCCCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHH-HHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhCCCCcCccccCcccCCceeCHH-HHHHHhChhhhhhCCCcchHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999986 89999999998888886 589999999999999999999999999999999999


Q ss_pred             HHhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          81 SDLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        81 ~eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      |||||||++|+|+||||+|++||++|+.|
T Consensus       118 ~eltGmd~~n~s~~~ga~a~~~~~~~~~~  146 (437)
T d1wyua1         118 AELAGLEIANASMYDGATALAEGVLLALR  146 (437)
T ss_dssp             HHHHTSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred             HHhhCCCccccCchHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999864

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.63  E-value=4.4e-16  Score=121.25  Aligned_cols=107  Identities=8%  Similarity=0.012  Sum_probs=88.5

Q ss_pred             CCCc-CCCHHHHHHHHHHHHhhccC-CCCcccCCCCCcccc-hhhhHH---HhcCCCccccCCCCCchhhhhHHHHHHHH
Q psy7866           3 NFDM-YLGEHELLEEIQSIANKNEI-WRSYIGLGYHNCLVP-TVIQRN---LFENPGWVTQYTPYQPEIAQGRLESLLNF   76 (109)
Q Consensus         3 ~LPe-~lsE~ev~rh~~~ls~~N~~-~~~f~g~G~~~ky~P-~vi~~~---ia~~~~f~t~yhPyQpe~sQG~Lq~l~e~   76 (109)
                      .||+ ++||.++.||+.+++.+|.. ..+|+|.|.+.++.| .+|.+.   +....++.+.|+||||+.+||+++..+|+
T Consensus        37 ~lP~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  116 (434)
T d2z67a1          37 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTN  116 (434)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHhcCcccccccccccceecccchhHHhhcccccccccccccchhhhhhhhhhhHHHHHHHH
Confidence            5897 69999999999999999975 788999998765543 333332   33445677889999999999999887776


Q ss_pred             H--HHHHHhhCCCccCCCCCChhhHHHHHHHhhcC
Q psy7866          77 Q--TMVSDLTGLSVANASLLDEATAAAEAMSICHR  109 (109)
Q Consensus        77 q--~~l~eltGmd~~n~S~ydga~A~~ea~~ma~r  109 (109)
                      |  .++++++|++..++++++|+++..++++||.|
T Consensus       117 ~~~~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r  151 (434)
T d2z67a1         117 KILESFFKQLGLNVHAIATPISTGMSISLCLSAAR  151 (434)
T ss_dssp             HHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCcceeecCcHHHHHHHHHHHHHH
Confidence            6  77999999999999999999999999999864

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=1.5e-07  Score=72.17  Aligned_cols=105  Identities=15%  Similarity=0.135  Sum_probs=66.6

Q ss_pred             CCCc-CCCHHHHHHHHHHHHhhccC-CCCcccCCCCCcccchhhhHHHh----cCCCccccCCCCCchhhhhHHHHHHH-
Q psy7866           3 NFDM-YLGEHELLEEIQSIANKNEI-WRSYIGLGYHNCLVPTVIQRNLF----ENPGWVTQYTPYQPEIAQGRLESLLN-   75 (109)
Q Consensus         3 ~LPe-~lsE~ev~rh~~~ls~~N~~-~~~f~g~G~~~ky~P~vi~~~ia----~~~~f~t~yhPyQpe~sQG~Lq~l~e-   75 (109)
                      .||+ ++||.++.+++.+++..+.. +.+|.+.|.+.++++.-++.+..    ...+...+++|+||+.+|++++..+| 
T Consensus        18 ~lP~~G~~~~~i~~~l~~~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~   97 (445)
T d3bc8a1          18 KCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITN   97 (445)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBCC-------CCSBHHHHHHHHHHH
T ss_pred             CCCcCCCCHHHHHHHHHHHHhccCCcccCcccccccCccccHHHHHHHHHhhccccccCcchhhhhhhhccchHHHHHHH
Confidence            4776 57999999999999988864 67889999876665432233221    11223466789999988888776666 


Q ss_pred             -HHHHHHHhhCCCccCCC-CCChhhH-HHHHHHhh
Q psy7866          76 -FQTMVSDLTGLSVANAS-LLDEATA-AAEAMSIC  107 (109)
Q Consensus        76 -~q~~l~eltGmd~~n~S-~ydga~A-~~ea~~ma  107 (109)
                       +..|+++++|++..... +-.|+|. ...++++|
T Consensus        98 ~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a  132 (445)
T d3bc8a1          98 SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLT  132 (445)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccCccccccchHHHHHHHHHH
Confidence             55999999999975543 3445553 33344444