Psyllid ID: psy7882

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MDTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLTGKNSSNTLKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTAAAKLADERDTLRSTNPSDPKLKELNYTIRKMVYEYKKNKWLEHLKEASFNKGPKNLWKTTSQ
Secondary Structure (PSIPRED)
cccccEEcccccccccccccccccccccccccccHHHHHHHcccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccccHHHHHHHHHHHHHccEEEEcccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccHHHHHHHcccccccEEcccccccEEcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEcccccccccEEEEEcccHHHHHHHHHcccccccEEEEccccHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccEEEEEEEcccccccEccHHHHHHHHHHHHHccEEEEcccccccEEEEcccEEEEHccHHHcccEEcHHHcccEEEEEccEcEEccccccccHHHHHHcccccHHHHHHHHHHHHcccccEEEEccccccEEccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
mdttyyrdcgvvvsavdfgsgdngtylgFQCLQICRFVQkdfkgsfwDKLIVHTSTCTFENFIKIKYQILKtpahklkisdtvrphvQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDlvqdketkvplnsrhmtHILDSCKehglllgrgglsgntltALQPKLLNYwtdfvgtpcldceskgtfqSYAGSInkltgknssntLKNAFRKNRLQLLPLREKIFCRNlnngrirfvpagripiirpnfSTAAAKLAderdtlrstnpsdpklkeLNYTIRKMVYEYKKNKWLEHLKEAsfnkgpknlwkttsq
Flexible Loop (DISEMBL)
MDTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPahklkisdtvrpHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINkltgknssntlKNAFRknrlqllplrEKIFcrnlnngrirfvpagripiirpNFSTAAakladerdtlrstnpsdpklkelnyTIRKMVYEYKKNKWLEHLkeasfnkgpknlwkttsq
Low Complexity Region (SEG)
MDTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHglllgrgglsgntlTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLTGKNSSNTLKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTAAAKLADERDTLRSTNPSDPKLKELNYTIRKMVYEYKKNKWLEHLKEASFNKGPKNLWKTTSQ
Disordered region (IsUnstruct)
***TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLT*******LKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTA**********************ELNYTIRKMVYEYKKNKWLEHLKE****************
Disordered Region (DISOPRED)
*DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY********************************KIFCRNLNNGRIRFVPAGRIPIIRPNFSTAAAKLA***************LKELNYTIRKMVYEYKKNKWLEHLKEASFNKGP***W*****
Disordered Region (DISEMBL)
MDTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLTGKNSSNTLKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTAAAKLADERDTLRSTNPSDPKLKELNYTIRKMVYEYKKNKWLEHLKEASFNKGPKNLWKTTSQ
Disordered Region (DISPRO)
***TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLTGKNSSNTLKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTAAAKLADERDTLRSTNPSDPKLKELNYTIRKMVYEYKKNKWLEHLKEASFNKGPK**W*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLTGKNSSNTLKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTAAAKLADERDTLRSTNPSDPKLKELNYTIRKMVYEYKKNKWLEHLKEASFNKGPKNLWKTTSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
Q17QF0	514	Alanine--glyoxylate amino	yes	N/A	0.218	0.140	0.555	7e-16
Q3UEG6	513	Alanine--glyoxylate amino	yes	N/A	0.234	0.150	0.493	3e-15
Q64565	512	Alanine--glyoxylate amino	yes	N/A	0.234	0.150	0.493	5e-15
Q5RFA3	514	Alanine--glyoxylate amino	yes	N/A	0.218	0.140	0.513	7e-15
Q9BYV1	514	Alanine--glyoxylate amino	yes	N/A	0.218	0.140	0.513	4e-14
Q94AL9	477	Alanine--glyoxylate amino	yes	N/A	0.234	0.161	0.448	6e-13
Q9SR86	481	Alanine--glyoxylate amino	no	N/A	0.234	0.160	0.397	5e-11
P33189	450	Uncharacterized aminotran	yes	N/A	0.197	0.144	0.5	2e-10
Q940M2	476	Alanine--glyoxylate amino	no	N/A	0.255	0.176	0.364	2e-09
Q8R1K4	467	5-phosphohydroxy-L-lysine	no	N/A	0.258	0.182	0.372	4e-08

>sp|Q17QF0|AGT2_BOVIN Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Bos taurus GN=AGXT2 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 52/72 (72%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG ++L  L+KLR+EF IVGDVRGKGLMIG+++V+DKE++ PL    +  I   CK  GL
Sbjct: 410 VGTYMLLKLAKLRDEFEIVGDVRGKGLMIGIEMVKDKESRQPLPREEVNQIHHDCKCMGL 469

Query: 163 LLGRGGLSGNTL 174
           L+GRGGL   T 
Sbjct: 470 LIGRGGLFSQTF 481

Bos taurus (taxid: 9913)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 0

>sp|Q3UEG6|AGT2_MOUSE Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Mus musculus GN=Agxt2 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 53/77 (68%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG ++L   +KLR+EF IVGDVRGKGLM+G+++VQDK ++ PL    +  I + CK+ GL
Sbjct: 409 VGTYMLLKFAKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKTEVNQIHEDCKDMGL 468

Query: 163 LLGRGGLSGNTLTALQP 179
           L+GRGG    T   + P
Sbjct: 469 LVGRGGNFSQTFRIVPP 485

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q64565|AGT2_RAT Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Rattus norvegicus GN=Agxt2 PE=1 SV=2

 Score = 82.0 bits (201), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 52/77 (67%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG ++L   +KLR+EF IVGDVRGKGLM+G+++VQDK ++ PL    +  I + CK+ GL
Sbjct: 408 VGTYMLLKFAKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKTEVNQIHEDCKDMGL 467

Query: 163 LLGRGGLSGNTLTALQP 179
           L+GRGG    T     P
Sbjct: 468 LVGRGGNFSQTFRIAPP 484

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q5RFA3|AGT2_PONAB Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Pongo abelii GN=AGXT2 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 50/72 (69%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG ++L   +KLR+EF IVGDVRGKGLMIG+++VQDK ++ PL    +  I + CK  GL
Sbjct: 410 VGTYMLLQFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISRRPLPREEVNQIHEDCKHMGL 469

Query: 163 LLGRGGLSGNTL 174
           L+GRG +   T 
Sbjct: 470 LVGRGSIFSQTF 481

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q9BYV1|AGT2_HUMAN Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens GN=AGXT2 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 49/72 (68%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG ++L   +KLR+EF IVGDVRGKGLMIG+++VQDK +  PL    +  I + CK  GL
Sbjct: 410 VGTYMLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGL 469

Query: 163 LLGRGGLSGNTL 174
           L+GRG +   T 
Sbjct: 470 LVGRGSIFSQTF 481

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 0

>sp|Q94AL9|AGT22_ARATH Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial OS=Arabidopsis thaliana GN=AGT3 PE=2 SV=2

 Score = 75.1 bits (183), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
           +VG++L   L++L+E+  I+GDVRG+GLM+GV+LV D++ K P  +  + HI+D  KE G
Sbjct: 379 MVGSYLKEKLTQLKEKHEIIGDVRGRGLMLGVELVSDRKLKTPATAETL-HIMDQMKELG 437

Query: 162 LLLGRGGLSGNTLTALQP 179
           +L+G+GG  GN      P
Sbjct: 438 VLIGKGGYFGNVFRITPP 455

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At3g08860 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
           +VG+ L   L+ L+ ++ ++GDVRG+GLM+GV+ V+D++ K P  +  + H++D  KE G
Sbjct: 383 LVGSHLKRRLTLLKNKYELIGDVRGRGLMLGVEFVKDRDLKTPAKAETL-HLMDQMKEMG 441

Query: 162 LLLGRGGLSGNTLTALQP 179
           +L+G+GG  GN      P
Sbjct: 442 VLVGKGGFYGNVFRITPP 459

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|P33189|YHXA_BACSU Uncharacterized aminotransferase YhxA OS=Bacillus subtilis (strain 168) GN=yhxA PE=3 SV=4

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  LL  L  LRE  A VGDVRGKGL+IG++LV+DK TK P ++  +  ++ +CKE GL
Sbjct: 349 LGAKLLGELQALREHPA-VGDVRGKGLLIGIELVKDKLTKEPADAAKVNQVVAACKEKGL 407

Query: 163 LLGRGG 168
           ++G+ G
Sbjct: 408 IIGKNG 413

Essential for glycerol catabolism.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 6

EC: .

EC: -

EC: .

EC: -

>sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial OS=Arabidopsis thaliana GN=AGT2 PE=1 SV=1

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 95  ERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154
           +R  H   VG+ L+  L  +++   I+GDVRG+GLM+G++LV D++ K P  +   + + 
Sbjct: 371 KRQEHCAEVGSHLIQRLKDVQKRHDIIGDVRGRGLMVGIELVSDRKDKTPAKAE-TSVLF 429

Query: 155 DSCKEHGLLLGRGGLSGNTLTALQP 179
           +  +E G+L+G+GGL GN      P
Sbjct: 430 EQLRELGILVGKGGLHGNVFRIKPP 454

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q8R1K4|AT2L2_MOUSE 5-phosphohydroxy-L-lysine phospho-lyase OS=Mus musculus GN=Agxt2l2 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 98  VHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC 157
            H   VG+FLL HL++ + +  I+GDVRG GL IGVDL++D+  + P  +    +++   
Sbjct: 334 AHATNVGSFLLEHLTQQKAKHPIIGDVRGTGLFIGVDLIKDETLRTPA-TEEAEYLVSRL 392

Query: 158 KEHGLLLGRGGLSGNTLTALQPKLLN 183
           KE+ +LL   G   N L    P   N
Sbjct: 393 KENYILLSIDGPGKNILKFKPPMCFN 418

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
195377816	503	GJ13565 [Drosophila virilis] gi|19415484	0.294	0.192	0.450	7e-17
242012679	473	alanine/glyoxylate aminotransferase 2, p	0.246	0.171	0.543	1e-16
345305751	715	PREDICTED: alanine--glyoxylate aminotran	0.234	0.107	0.545	3e-16
195019225	503	GH14768 [Drosophila grimshawi] gi|193898	0.328	0.214	0.408	7e-16
289743451	515	alanine-glyoxylate transaminase 1 [Gloss	0.258	0.165	0.489	9e-16
195127744	491	GI11871 [Drosophila mojavensis] gi|19391	0.270	0.181	0.447	1e-15
161085790	518	CG11241, isoform B [Drosophila melanogas	0.279	0.177	0.468	2e-15
346468057	493	hypothetical protein [Amblyomma maculatu	0.237	0.158	0.538	2e-15
124248458	237	IP18234p [Drosophila melanogaster]	0.279	0.388	0.468	2e-15
198462402	509	GA10859 [Drosophila pseudoobscura pseudo	0.270	0.174	0.458	2e-15

>gi|195377816|ref|XP_002047683.1| GJ13565 [Drosophila virilis] gi|194154841|gb|EDW70025.1| GJ13565 [Drosophila virilis]

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 5/102 (4%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VGN+ L  L +L++ F ++GDVRGKGLMIGV+LV D+ET+ PL + H+  I ++CK+ G+
Sbjct: 400 VGNYFLKCLEELQQRFELIGDVRGKGLMIGVELVNDRETRAPLAAPHVLDIWETCKDMGV 459

Query: 163 LLGRGGLSGNTLTALQPKLLN-----YWTDFVGTPCLDCESK 199
           L GRGGL+GN L    P  +N     +  D +G    D  +K
Sbjct: 460 LFGRGGLNGNVLRIKPPMCINRTDVRFAVDVLGRAIADTLAK 501

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012679|ref|XP_002427055.1| alanine/glyoxylate aminotransferase 2, putative [Pediculus humanus corporis] gi|212511313|gb|EEB14317.1| alanine/glyoxylate aminotransferase 2, putative [Pediculus humanus corporis]

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 56/81 (69%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG +LL  L+KLR+E+ IVGDVRGKG+MIGV+ V+DK+TK PLN     +IL+ CK  G+
Sbjct: 370 VGTYLLQKLAKLRDEYEIVGDVRGKGMMIGVEFVEDKKTKQPLNPNAFGNILEQCKNSGV 429

Query: 163 LLGRGGLSGNTLTALQPKLLN 183
           L G GG  GN L    P  +N
Sbjct: 430 LFGIGGFKGNVLRVKPPMCIN 450

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345305751|ref|XP_001509172.2| PREDICTED: alanine--glyoxylate aminotransferase 2, mitochondrial-like [Ornithorhynchus anatinus]

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 56/77 (72%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           VG +LL  L+KLR++F IVGDVRGKGLM+GV++V D+E++ PL ++ M  I D CK  GL
Sbjct: 609 VGTYLLLELAKLRDKFEIVGDVRGKGLMVGVEMVTDQESRQPLPAKEMNAIHDDCKNMGL 668

Query: 163 LLGRGGLSGNTLTALQP 179
           L+G+GGL G T     P
Sbjct: 669 LIGKGGLYGQTFRVKPP 685

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195019225|ref|XP_001984936.1| GH14768 [Drosophila grimshawi] gi|193898418|gb|EDV97284.1| GH14768 [Drosophila grimshawi]

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 7/115 (6%)

Query: 88  QIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           Q++++ LE       VG + L  L +L++ + ++GDVRGKGLMIGV+LV D+ET+ PL +
Sbjct: 392 QLQRNSLE-------VGTYFLKCLEELQKRYELIGDVRGKGLMIGVELVNDRETRAPLAA 444

Query: 148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTF 202
            HM  I ++CK+ G+L GRGGL GN L    P  +N          L C    T 
Sbjct: 445 PHMLDIWETCKDLGVLFGRGGLHGNVLRIKPPMCINRADAKFAVDVLGCAIANTL 499

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289743451|gb|ADD20473.1| alanine-glyoxylate transaminase 1 [Glossina morsitans morsitans]

 Score = 90.5 bits (223), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 7/92 (7%)

Query: 88  QIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           Q++K+ LE       VG + L  LS+LR+ + IVGDVRGKGLMIG++LV D+ETK PL++
Sbjct: 398 QLQKNSLE-------VGTYFLKCLSELRDRYEIVGDVRGKGLMIGIELVNDRETKTPLST 450

Query: 148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQP 179
            ++  I + CK+ G+LLG+GGL+GN      P
Sbjct: 451 MNVMEIWEQCKDMGVLLGKGGLNGNIFRIKPP 482

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195127744|ref|XP_002008328.1| GI11871 [Drosophila mojavensis] gi|193919937|gb|EDW18804.1| GI11871 [Drosophila mojavensis]

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 7/96 (7%)

Query: 88  QIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           Q++++ LE       VG + L  L +L++ + ++GDVRGKGLMIGV+LV D+ET+ PL +
Sbjct: 380 QLQRNSLE-------VGTYFLNCLEELQQRYELIGDVRGKGLMIGVELVSDRETRAPLAA 432

Query: 148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLN 183
            H+  I ++CK+ G+L GRGGL GN L    P  +N
Sbjct: 433 PHVLDIWETCKDMGVLFGRGGLHGNVLRIKPPMCIN 468

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161085790|ref|NP_730741.2| CG11241, isoform B [Drosophila melanogaster] gi|157816486|gb|ABV82236.1| IP18034p [Drosophila melanogaster] gi|158028607|gb|AAN12201.2| CG11241, isoform B [Drosophila melanogaster]

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 89  IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
           I++  L+R  ++  VG + L  L++L++ F I+GDVRGKGLMIGV+LV ++E + PL + 
Sbjct: 393 IEEEQLQR--NSLEVGTYFLKGLAELQQRFEIIGDVRGKGLMIGVELVGNREKRTPLATP 450

Query: 149 HMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLL 182
           H+  I + CK+ G+LLGRGGL GN L+   P  L
Sbjct: 451 HVLDIWEKCKDQGVLLGRGGLHGNVLSMRPPLCL 484

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346468057|gb|AEO33873.1| hypothetical protein [Amblyomma maculatum]

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 56/78 (71%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
           V+GN LL  L  LR+EF ++GDVRGKGLM+GV+ V+ KETKVPL +  +  IL+ C+E G
Sbjct: 391 VLGNRLLQALESLRKEFPVIGDVRGKGLMLGVEFVKSKETKVPLGAEKVNAILEHCREMG 450

Query: 162 LLLGRGGLSGNTLTALQP 179
           LL+G+GG  G+ L    P
Sbjct: 451 LLIGKGGQYGHVLRIKPP 468

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|124248458|gb|ABM92849.1| IP18234p [Drosophila melanogaster]

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 89  IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
           I++  L+R  ++  VG + L  L++L++ F I+GDVRGKGLMIGV+LV ++E + PL + 
Sbjct: 127 IEEEQLQR--NSLEVGTYFLKGLAELQQRFEIIGDVRGKGLMIGVELVGNREKRTPLATP 184

Query: 149 HMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLL 182
           H+  I + CK+ G+LLGRGGL GN L+   P  L
Sbjct: 185 HVLDIWEKCKDQGVLLGRGGLHGNVLSMRPPLCL 218

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198462402|ref|XP_001352400.2| GA10859 [Drosophila pseudoobscura pseudoobscura] gi|198150810|gb|EAL29896.2| GA10859 [Drosophila pseudoobscura pseudoobscura]

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 7/96 (7%)

Query: 88  QIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           Q++++ LE       VG + L  L +L++ F IVGDVRGKGLMIGV+LV+D+E + PL +
Sbjct: 398 QLQRNSLE-------VGTYFLKCLEELQQRFEIVGDVRGKGLMIGVELVEDREKRTPLAT 450

Query: 148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLN 183
            H+  I ++CK+ G+L GRGGL GN L    P  ++
Sbjct: 451 PHVLEIWETCKDLGVLFGRGGLHGNVLRIKPPMCID 486

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
UNIPROTKB|Q17QF0	514	AGXT2 "Alanine--glyoxylate ami	0.206	0.132	0.485	1.5e-09
UNIPROTKB|F1SND2	515	AGXT2 "Uncharacterized protein	0.170	0.108	0.571	1.5e-09
UNIPROTKB|F1NQJ1	479	AGXT2 "Uncharacterized protein	0.173	0.118	0.508	2.2e-09
UNIPROTKB|F1MLG7	514	AGXT2 "Alanine--glyoxylate ami	0.206	0.132	0.485	3.3e-09
RGD|621767	512	Agxt2 "alanine-glyoxylate amin	0.209	0.134	0.450	4.2e-09
UNIPROTKB|Q64565	512	Agxt2 "Alanine--glyoxylate ami	0.209	0.134	0.450	4.2e-09
MGI|MGI:2146052	513	Agxt2 "alanine-glyoxylate amin	0.209	0.134	0.450	4.2e-09
UNIPROTKB|E2QZD7	514	AGXT2 "Uncharacterized protein	0.206	0.132	0.457	9.2e-09
UNIPROTKB|E9PDL7	439	AGXT2 "Alanine--glyoxylate ami	0.276	0.207	0.383	1.2e-08
ZFIN|ZDB-GENE-050913-100	517	agxt2 "alanine-glyoxylate amin	0.173	0.110	0.491	2e-08

UNIPROTKB|Q17QF0 AGXT2 "Alanine--glyoxylate aminotransferase 2, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 34/70 (48%), Positives = 49/70 (70%)

Query:    89 IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
             IK+  L+   ++  VG ++L  L+KLR+EF IVGDVRGKGLMIG+++V+DKE++ PL   
Sbjct:   398 IKEENLQE--NSQEVGTYMLLKLAKLRDEFEIVGDVRGKGLMIGIEMVKDKESRQPLPRE 455

Query:   149 HMTHILDSCK 158
              +  I   CK
Sbjct:   456 EVNQIHHDCK 465

GO:0005739 "mitochondrion" evidence=IEA

GO:0047305 "(R)-3-amino-2-methylpropionate-pyruvate transaminase activity" evidence=IEA

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|F1SND2 AGXT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 32/56 (57%), Positives = 42/56 (75%)

Query:   103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158
             VG +LL  L+KLR+EF IVGDVRGKGLMIG+++V+DK ++ PL    +  IL  CK
Sbjct:   411 VGTYLLLKLAKLRDEFDIVGDVRGKGLMIGIEMVKDKTSRQPLPGEEVNQILMDCK 466

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0019481 "L-alanine catabolic process, by transamination" evidence=IEA

GO:0019265 "glycine biosynthetic process, by transamination of glyoxylate" evidence=IEA

GO:0009436 "glyoxylate catabolic process" evidence=IEA

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|F1NQJ1 AGXT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 29/57 (50%), Positives = 44/57 (77%)

Query:   103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE 159
             VG ++L  L+KLR++F IVGDVRGKGLMIG+++V DK+++ PL +  +  I + CK+
Sbjct:   376 VGTYMLLELAKLRDKFEIVGDVRGKGLMIGIEMVTDKDSRHPLPAEEINQIWEDCKD 432

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=IEA

GO:0009436 "glyoxylate catabolic process" evidence=IEA

GO:0019265 "glycine biosynthetic process, by transamination of glyoxylate" evidence=IEA

GO:0019481 "L-alanine catabolic process, by transamination" evidence=IEA

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA

UNIPROTKB|F1MLG7 AGXT2 "Alanine--glyoxylate aminotransferase 2, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 34/70 (48%), Positives = 48/70 (68%)

Query:    89 IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
             IK+  L+   ++  VG ++L  L+KLR+EF IVGDVRGKGLMIG+++V+DKE+  PL   
Sbjct:   398 IKEENLQE--NSQEVGTYMLLKLAKLRDEFEIVGDVRGKGLMIGIEMVKDKESHQPLPRE 455

Query:   149 HMTHILDSCK 158
              +  I   CK
Sbjct:   456 EVNQIHHDCK 465

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0019481 "L-alanine catabolic process, by transamination" evidence=IEA

GO:0019265 "glycine biosynthetic process, by transamination of glyoxylate" evidence=IEA

GO:0009436 "glyoxylate catabolic process" evidence=IEA

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

RGD|621767 Agxt2 "alanine-glyoxylate aminotransferase 2" [Rattus norvegicus (taxid:10116)]

 Score = 162 (62.1 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 32/71 (45%), Positives = 50/71 (70%)

Query:    89 IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
             I++  L+R  ++  VG ++L   +KLR+EF IVGDVRGKGLM+G+++VQDK ++ PL   
Sbjct:   396 IEEENLQR--NSQEVGTYMLLKFAKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKT 453

Query:   149 HMTHILDSCKE 159
              +  I + CK+
Sbjct:   454 EVNQIHEDCKD 464

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=IEA;ISO

GO:0008483 "transaminase activity" evidence=IEA

GO:0009436 "glyoxylate catabolic process" evidence=IEA;ISO

GO:0016223 "beta-alanine-pyruvate transaminase activity" evidence=EXP

GO:0019265 "glycine biosynthetic process, by transamination of glyoxylate" evidence=IEA;ISO

GO:0019481 "L-alanine catabolic process, by transamination" evidence=IEA;ISO

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA;ISO

GO:0047305 "(R)-3-amino-2-methylpropionate-pyruvate transaminase activity" evidence=EXP

UNIPROTKB|Q64565 Agxt2 "Alanine--glyoxylate aminotransferase 2, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 162 (62.1 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 32/71 (45%), Positives = 50/71 (70%)

Query:    89 IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
             I++  L+R  ++  VG ++L   +KLR+EF IVGDVRGKGLM+G+++VQDK ++ PL   
Sbjct:   396 IEEENLQR--NSQEVGTYMLLKFAKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKT 453

Query:   149 HMTHILDSCKE 159
              +  I + CK+
Sbjct:   454 EVNQIHEDCKD 464

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

MGI|MGI:2146052 Agxt2 "alanine-glyoxylate aminotransferase 2" [Mus musculus (taxid:10090)]

 Score = 162 (62.1 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 32/71 (45%), Positives = 50/71 (70%)

Query:    89 IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
             I++  L+R  ++  VG ++L   +KLR+EF IVGDVRGKGLM+G+++VQDK ++ PL   
Sbjct:   397 IEEENLQR--NSQEVGTYMLLKFAKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKT 454

Query:   149 HMTHILDSCKE 159
              +  I + CK+
Sbjct:   455 EVNQIHEDCKD 465

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=ISO

GO:0008483 "transaminase activity" evidence=IEA

GO:0009436 "glyoxylate catabolic process" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0019265 "glycine biosynthetic process, by transamination of glyoxylate" evidence=ISO

GO:0019481 "L-alanine catabolic process, by transamination" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=ISO

GO:0047305 "(R)-3-amino-2-methylpropionate-pyruvate transaminase activity" evidence=IEA

UNIPROTKB|E2QZD7 AGXT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 159 (61.0 bits), Expect = 9.2e-09, P = 9.2e-09
 Identities = 32/70 (45%), Positives = 49/70 (70%)

Query:    89 IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
             IK+  L+   ++  VG ++L   ++LR+EF IVGDVRGKGLMIG+++V+DK ++ PL   
Sbjct:   398 IKEENLQE--NSQEVGTYMLQKFAELRDEFEIVGDVRGKGLMIGIEMVKDKMSRQPLPRE 455

Query:   149 HMTHILDSCK 158
              +  I D+CK
Sbjct:   456 EVNEIHDNCK 465

GO:0045429 "positive regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0019481 "L-alanine catabolic process, by transamination" evidence=IEA

GO:0019265 "glycine biosynthetic process, by transamination of glyoxylate" evidence=IEA

GO:0009436 "glyoxylate catabolic process" evidence=IEA

GO:0008453 "alanine-glyoxylate transaminase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|E9PDL7 AGXT2 "Alanine--glyoxylate aminotransferase 2, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 38/99 (38%), Positives = 61/99 (61%)

Query:    60 ENFIKIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFA 119
             + F+K  +++++     + I+D V     IK+  L+   ++  VG ++L   +KLR+EF 
Sbjct:   300 KGFLKEAFELVRARGG-VCIADEV-----IKEENLQE--NSQEVGTYMLLKFAKLRDEFE 351

Query:   120 IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158
             IVGDVRGKGLMIG+++VQDK +  PL    +  I + CK
Sbjct:   352 IVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCK 390

GO:0008483 "transaminase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

ZFIN|ZDB-GENE-050913-100 agxt2 "alanine-glyoxylate aminotransferase 2" [Danio rerio (taxid:7955)]

 Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 28/57 (49%), Positives = 42/57 (73%)

Query:   103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE 159
             +G +LLT L+KLR+++ I+GDVRGKGL IGV++V+DK ++ PL    M  I +  K+
Sbjct:   415 LGTYLLTELAKLRDKYEIIGDVRGKGLQIGVEMVKDKASRTPLPQEAMNEIFEDTKD 471

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	329
COG0160	447	COG0160, GabT, 4-aminobutyrate aminotransferase an	7e-19
PRK07678	451	PRK07678, PRK07678, aminotransferase; Validated	5e-17
cd00610	413	cd00610, OAT_like, Acetyl ornithine aminotransfera	5e-15
COG0161	449	COG0161, BioA, Adenosylmethionine-8-amino-7-oxonon	3e-13
PRK06917	447	PRK06917, PRK06917, hypothetical protein; Provisio	2e-12
PRK07481	449	PRK07481, PRK07481, hypothetical protein; Provisio	3e-12
PRK06148	1013	PRK06148, PRK06148, hypothetical protein; Provisio	3e-12
PRK08360	443	PRK08360, PRK08360, 4-aminobutyrate aminotransfera	4e-12
PRK06931	459	PRK06931, PRK06931, diaminobutyrate--2-oxoglutarat	7e-12
PRK05769	441	PRK05769, PRK05769, 4-aminobutyrate aminotransfera	5e-10
PRK06938	464	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarat	5e-10
PRK08117	433	PRK08117, PRK08117, 4-aminobutyrate aminotransfera	5e-10
PRK05639	457	PRK05639, PRK05639, 4-aminobutyrate aminotransfera	2e-09
PRK06082	459	PRK06082, PRK06082, 4-aminobutyrate aminotransfera	1e-08
PRK07483	443	PRK07483, PRK07483, hypothetical protein; Provisio	2e-08
PRK06062	451	PRK06062, PRK06062, hypothetical protein; Provisio	2e-08
TIGR00709	442	TIGR00709, dat, 2,4-diaminobutyrate 4-transaminase	3e-08
PRK06918	451	PRK06918, PRK06918, 4-aminobutyrate aminotransfera	4e-08
PRK06058	443	PRK06058, PRK06058, 4-aminobutyrate aminotransfera	4e-08
PRK08593	445	PRK08593, PRK08593, 4-aminobutyrate aminotransfera	6e-08
PRK07036	466	PRK07036, PRK07036, hypothetical protein; Provisio	1e-07
COG4992	404	COG4992, ArgD, Ornithine/acetylornithine aminotran	9e-07
PRK08088	425	PRK08088, PRK08088, 4-aminobutyrate aminotransfera	1e-06
PRK02627	396	PRK02627, PRK02627, acetylornithine aminotransfera	2e-06
PRK06916	460	PRK06916, PRK06916, adenosylmethionine--8-amino-7-	1e-05
PRK06105	460	PRK06105, PRK06105, aminotransferase; Provisional	3e-05
PRK06149	972	PRK06149, PRK06149, hypothetical protein; Provisio	4e-05
PRK04612	408	PRK04612, argD, acetylornithine transaminase prote	7e-05
PRK08297	443	PRK08297, PRK08297, L-lysine aminotransferase; Pro	9e-05
PRK05965	459	PRK05965, PRK05965, hypothetical protein; Provisio	4e-04
PRK07482	461	PRK07482, PRK07482, hypothetical protein; Provisio	4e-04
TIGR00700	420	TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransf	4e-04
PRK06541	460	PRK06541, PRK06541, hypothetical protein; Provisio	0.001
TIGR03251	431	TIGR03251, LAT_fam, L-lysine 6-transaminase	0.001
PRK07480	456	PRK07480, PRK07480, putative aminotransferase; Val	0.002
pfam00202	338	pfam00202, Aminotran_3, Aminotransferase class-III	0.002

>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

 Score = 86.5 bits (215), Expect = 7e-19
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
            +G +L   L +L+E+  ++GDVRG GLMIGV+LV+D++TK P ++     I+    E G
Sbjct: 348 ELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEP-DAELAAKIVARAFERG 406

Query: 162 LLLGRGGLSGNTL 174
           LLL   G  GN L
Sbjct: 407 LLLLTCGPHGNVL 419

Length = 447

>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated

 Score = 81.2 bits (201), Expect = 5e-17
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  LL  L +   E  +VGD+RGKGL++G++LV DKETK P ++  +  ++ +CKE GL
Sbjct: 348 LGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGL 407

Query: 163 LLGRGGLS---GNTLTALQPKL 181
           ++G+ G +    N +  L P L
Sbjct: 408 IIGKNGDTVAGYNNVLTLSPPL 429

Length = 451

>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family

 Score = 74.9 bits (185), Expect = 5e-15
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
            +G +L   L +L E+  +VGDVRG+GLMIG++LV+D+ TK P +      I+ +  E G
Sbjct: 320 ELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATK-PPDKELAAKIIKAALERG 378

Query: 162 LLLGRGGLSGNTL 174
           LLL   G  GN +
Sbjct: 379 LLLRPSG--GNVI 389

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation. Length = 413

>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

 Score = 69.9 bits (172), Expect = 3e-13
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G +L   L     +  +VGDVRG GL+  ++LV DK TK P  +R    +  +  E GL
Sbjct: 349 IGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGL 408

Query: 163 LL 164
           L+
Sbjct: 409 LI 410

Length = 449

>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 10/90 (11%)

Query: 77  LKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV 136
           L + + +  H   +K+  +        G +L+  L K++++  I+GDVRGKGL+IGV+ V
Sbjct: 315 LAVLEYMEKHNLPEKAAEK--------GEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFV 366

Query: 137 QDKETKVPLNSRH-MTH-ILDSCKEHGLLL 164
            DK+TK P +    +   ++    ++GLLL
Sbjct: 367 ADKKTKQPFSKSQAVASELISVAAKNGLLL 396

Length = 447

>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHILDSCKEH 160
            G +LL  L  L+E F +VGDVRGKGLM+ +DLV DK T+ P++    +   + D  +E+
Sbjct: 349 RGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAREN 408

Query: 161 GLLLGRGG 168
           G+L+   G
Sbjct: 409 GVLVRPSG 416

Length = 449

>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional

 Score = 67.4 bits (165), Expect = 3e-12
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 9/77 (11%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL----DSC 157
            +GN+LL  L +L++ F I+GDVRG GL +G++LV D++TK P      T I     +  
Sbjct: 913 EIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP-----ATAIARYVKNGA 967

Query: 158 KEHGLLLGRGGLSGNTL 174
           +E G+L+G  G   N L
Sbjct: 968 RERGILIGTEGPHDNVL 984

Length = 1013

>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional

 Score = 66.3 bits (162), Expect = 4e-12
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +GN+    L +++++  ++GDVRG GLMIGVDLV+D+ETK          ++    E GL
Sbjct: 332 LGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETK-ERAYEEAAKVVWRAWELGL 390

Query: 163 LLGRGGLSGNTLTALQPKL 181
           ++     SGN L  +QP L
Sbjct: 391 IVTF--FSGNVLR-IQPPL 406

Length = 443

>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

 Score = 65.5 bits (160), Expect = 7e-12
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 5/85 (5%)

Query: 104 GNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHMTHILDSCK 158
           G +L   L++L++ +  +G+VRG+GLMIG+++V +++        P +      I  +C 
Sbjct: 353 GEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF 412

Query: 159 EHGLLLGRGGLSGNTLTALQPKLLN 183
           E+GLLL RGG +GN +  L P L+ 
Sbjct: 413 ENGLLLERGGRNGNVVRLLPPLLIT 437

Length = 459

>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 89  IKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR 148
           +++ +LE   +   +G +L   L +L+E++  +GDVRG GLMIGV+LV+D++     + +
Sbjct: 336 LEEGLLE---NAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEP---DPK 389

Query: 149 HMTHILDSCKEHGLLL 164
               +L    + GLLL
Sbjct: 390 LRDKVLYEAFKRGLLL 405

Length = 441

>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

 Score = 60.0 bits (146), Expect = 5e-10
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV-----QDKETKVPLNSRHMTHI 153
           H   +G  L  HL +L+ ++  +GDVRG+GLM+GV++V      D     P N    + I
Sbjct: 354 HAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLI 413

Query: 154 LDSCKEHGLLLGRGGLSGNTLTALQP 179
              C   GL+L  GG  G+ +  L P
Sbjct: 414 QRECLRRGLILELGGRHGSVVRFLPP 439

Length = 464

>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
            +G + L  L  L+E+  ++GDVRG GLMIG+++V         +   +  ILD C E G
Sbjct: 334 EMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEP---DGDAVEKILDKCLEKG 390

Query: 162 LLLGRGGLSGNTLTALQP 179
           LL    G +GN L  + P
Sbjct: 391 LLFYLCGNAGNVLRMIPP 408

Length = 433

>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 8/115 (6%)

Query: 70  LKTPAHKLKISDTVRPHVQI--KKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGK 127
           L TPA    IS      ++I  ++++L+  +    VG F+   L +++E F ++GDVRGK
Sbjct: 317 LLTPAANPVISAAAEATLEIIEEENLLKNALK---VGEFIKKRLLEMKESFEVIGDVRGK 373

Query: 128 GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLL 182
           GLMIGV++V  KE   P +      I     E GL+L   G+ GN +    P ++
Sbjct: 374 GLMIGVEIV--KENGKP-DPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVI 425

Length = 457

>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 104 GNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLL 163
             F+   L +++ ++ ++GDVRG GL+ GV+LV D+ TK          +L  C  +GL 
Sbjct: 358 SQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKER-AYDEAEAVLYRCLNNGLS 416

Query: 164 LGRGGLSGNTLTALQPKLL 182
                  GN +  L P L+
Sbjct: 417 FKVSQ--GNVIQ-LSPPLI 432

Length = 459

>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 112 SKLREEFA---IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH--ILDSCKEHGLL 163
           ++LRE       VGD+RG+GL +GV+LV D+ TK P +     H  I       GL+
Sbjct: 339 ARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLM 395

Length = 443

>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)

Query: 111 LSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH-----MTHILDSCKEHGLL 163
           L +L E    VG+VRG G+   ++LV D+ET+ PL         M  +  +CKE GLL
Sbjct: 354 LRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLL 411

Length = 451

>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 104 GNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHMTHILDSCK 158
           G  + + L  + +E   +G+VRG+GLM G+ +V ++++K      P +      I  +C 
Sbjct: 334 GERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF 393

Query: 159 EHGLLLGRGGLSGNTLTALQPKLLN 183
           E+GLLL  GG  G     L P  ++
Sbjct: 394 ENGLLLETGGREGEVFRLLCPITID 418

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase [Central intermediary metabolism, Other]. Length = 442

>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  ++    +++ ++  +GDVRG G M   +LVQD++TK P +     +I     + GL
Sbjct: 347 LGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEP-DKTLTANICKEANKRGL 405

Query: 163 LLGRGGLSGNTLTALQP 179
           LL   G  GN +  L P
Sbjct: 406 LLLSAGTYGNVIRVLMP 422

Length = 451

>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +   +   L  L  E   +GDVRG+G MI ++LV+   T  P ++     +  +    G+
Sbjct: 347 IEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPG-TTEP-DAELTKALAAAAHAAGV 404

Query: 163 LLGRGGLSGNTLTALQP 179
           ++   G  GN +  L P
Sbjct: 405 IVLTCGTYGNVIRLLPP 421

Length = 443

>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional

 Score = 53.6 bits (129), Expect = 6e-08
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 104 GNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLL 163
           G +      +   ++  VGDVRG GL IG+D+V DK+ K   ++     I + C EHG++
Sbjct: 336 GEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTR-DNEAALKICNYCFEHGVV 394

Query: 164 LGRGGLSGNTLTALQPKL 181
           +    ++GN L   QP L
Sbjct: 395 I--IAVAGNVLR-FQPPL 409

Length = 445

>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK--VPLNSRHMTHILDS 156
           H   VG +    L+ LRE   +VGDVRG  LM  V+ V DK +K  +P +      I   
Sbjct: 353 HVREVGPYFEERLASLRE-LPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRH 411

Query: 157 CKEHGLL 163
           C+E GLL
Sbjct: 412 CQERGLL 418

Length = 466

>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

 Score = 49.9 bits (120), Expect = 9e-07
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 9/62 (14%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
            G +LL  L +L+  + +V +VRG+GLMIG++L +    +          I+ + +E G+
Sbjct: 312 KGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRAR---------DIVRALREEGV 362

Query: 163 LL 164
           L+
Sbjct: 363 LV 364

Length = 404

>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  L   L  + E+   +GDVRG G MI ++L +D +   P N++    I+   ++ GL
Sbjct: 327 LGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKP-NAKLTAQIVARARDKGL 385

Query: 163 LLGRGGLSGNTLTALQP 179
           +L   G   N L  L P
Sbjct: 386 ILLSCGPYYNVLRILVP 402

Length = 425

>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158
           +   VG +L   L +L E++  + +VRG GLMIG++L        P        I+    
Sbjct: 306 NAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIEL------DRPAAE-----IVKKAL 354

Query: 159 EHGLLL 164
           E GLL+
Sbjct: 355 EKGLLI 360

Length = 396

>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 106 FLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144
           ++ T L  L      VGD+R  GLM+G++LV++KETK P
Sbjct: 363 YVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKETKEP 400

Length = 460

>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL 145
           +    G  L   L  L +   +VG+VRG GL+  V+LV DK TK P 
Sbjct: 350 NAAERGARLQARLRALADH-PLVGEVRGVGLIAAVELVADKATKTPF 395

Length = 460

>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional

 Score = 45.0 bits (107), Expect = 4e-05
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144
            VG+ L   L  L +   ++G V G GL +GV+LV+D++T  P
Sbjct: 873 RVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP 915

Length = 972

>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional

 Score = 43.8 bits (103), Expect = 7e-05
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 111 LSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG 168
           L  L  EF +   VRG+GLM+G  L        P ++     ILD   EHGLLL + G
Sbjct: 323 LEALNAEFGVFAQVRGRGLMLGAVL-------APAHAGQAGAILDLAAEHGLLLLQAG 373

Length = 408

>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 102 VVGNFLLTHLSKLREEF-AIVGDVRGKGLMIGVDL 135
             G +LL  L +L  EF A+V +VRG+GLM   DL
Sbjct: 353 RQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDL 387

Length = 443

>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 107 LLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH--ILDSCKEHGL 162
               L  LR    +VGDVRG+GL+  ++LV DK TK P ++       I D    +GL
Sbjct: 355 FAAGLDALRAH-PLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGL 411

Length = 459

>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           VG +    L     +  +VG+VRG G++  V+ V D++ + P + 
Sbjct: 356 VGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDP 400

Length = 461

>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase, prokaryotic type

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  +   L+ L+     +GDVRG G MI V+LV D  T  P ++     I  +    GL
Sbjct: 325 IGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV-DPGTTEP-DAGLAERIATAAHAAGL 382

Query: 163 LLGRGGLSGNTLTALQP 179
           LL   G+ GN +  L P
Sbjct: 383 LLLTCGMFGNIIRFLPP 399

This enzyme is a class III pyridoxal-phosphate-dependent aminotransferase. This model describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. The degree of sequence difference between this set and known eukaryotic (mitochondrial) examples is greater than the distance to some proteins known to have different functions, and so separate models are built for prokaryotic and eukaryotic sets. E. coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase [Central intermediary metabolism, Other]. Length = 420

>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 111 LSKLREEFAIVGDVRGKGLMIGVDLVQDKETK 142
           L KL +   IVGDVRG G   G++LV+DK TK
Sbjct: 362 LEKLLD-LPIVGDVRGDGYFYGIELVKDKATK 392

Length = 460

>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 93  VLER---FVHTYVVGNFLLTHLSKLREEF-AIVGDVRGKGLMIGVDL 135
           ++E      +  V G  LL  L +L  EF  +V + RG+GLM   DL
Sbjct: 334 IIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDL 380

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites. Length = 431

>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 93  VLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP 144
           ++ER V     G +L   L +L  +  +VG+VRG GL+  ++LV+DK T+  
Sbjct: 345 IVER-VRD-DTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRER 393

Length = 456

>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 15/35 (42%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ 137
            G++L   L  L+++  ++GDVRGKGLMI +++V+
Sbjct: 305 KGDYLRKGLLALQDK-PVIGDVRGKGLMIAIEIVK 338

Length = 338

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	100.0
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	100.0
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	100.0
KOG1404|consensus	442		100.0
PRK07483	443	hypothetical protein; Provisional	100.0
PRK05965	459	hypothetical protein; Provisional	100.0
PRK07482	461	hypothetical protein; Provisional	100.0
PRK07678	451	aminotransferase; Validated	100.0
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07481	449	hypothetical protein; Provisional	100.0
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PLN02760	504	4-aminobutyrate:pyruvate transaminase	100.0
PRK06917	447	hypothetical protein; Provisional	100.0
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	100.0
PRK07480	456	putative aminotransferase; Validated	100.0
PRK07036	466	hypothetical protein; Provisional	100.0
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	100.0
PRK06105	460	aminotransferase; Provisional	100.0
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06062	451	hypothetical protein; Provisional	100.0
PRK12403	460	putative aminotransferase; Provisional	100.0
KOG1402|consensus	427		100.0
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	100.0
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06148	1013	hypothetical protein; Provisional	100.0
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	100.0
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	100.0
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	100.0
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06149	972	hypothetical protein; Provisional	100.0
PRK06541	460	hypothetical protein; Provisional	100.0
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	100.0
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	100.0
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	100.0
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	100.0
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.97
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.97
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.97
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.97
KOG1403|consensus	452		99.97
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.97
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.97
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.97
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.97
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.97
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.97
PRK08297	443	L-lysine aminotransferase; Provisional	99.97
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.97
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.97
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.96
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.96
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.96
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.96
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.96
PLN00144	382	acetylornithine transaminase	99.96
KOG1401|consensus	433		99.96
PRK07046	453	aminotransferase; Validated	99.96
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.96
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.96
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.95
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.95
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.95
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.95
PLN02624	474	ornithine-delta-aminotransferase	99.95
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.94
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.93
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.93
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.93
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.92
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.92
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.92
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.92
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.9
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.9
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.9
PRK04260	375	acetylornithine aminotransferase; Provisional	99.9
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.89
PRK02627	396	acetylornithine aminotransferase; Provisional	99.88
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.87
KOG1405|consensus	484		99.78
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.71
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.71
PRK07505	402	hypothetical protein; Provisional	99.53
PLN02822	481	serine palmitoyltransferase	99.39
PRK13393	406	5-aminolevulinate synthase; Provisional	99.34
PRK09064	407	5-aminolevulinate synthase; Validated	99.24
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.21
PRK07179	407	hypothetical protein; Provisional	99.18
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	98.9
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	98.85
PLN02955	476	8-amino-7-oxononanoate synthase	98.83
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	98.73
PRK13392	410	5-aminolevulinate synthase; Provisional	98.72
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	98.67
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	98.65
PLN02483	489	serine palmitoyltransferase	98.64
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	98.62
cd00609	350	AAT_like Aspartate aminotransferase family. This f	98.6
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	98.39
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	98.36
PRK06225	380	aspartate aminotransferase; Provisional	98.35
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	98.31
PRK13520	371	L-tyrosine decarboxylase; Provisional	98.25
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	98.1
PRK02731	367	histidinol-phosphate aminotransferase; Validated	98.08
KOG1359|consensus	417		98.05
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	98.03
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	98.02
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	97.96
TIGR01814	406	kynureninase kynureninase. This model describes ky	97.92
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	97.9
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	97.89
PRK06108	382	aspartate aminotransferase; Provisional	97.79
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	97.71
PLN02721	353	threonine aldolase	97.7
PRK07324	373	transaminase; Validated	97.69
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	97.68
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	97.55
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	97.49
PRK03321	352	putative aminotransferase; Provisional	97.49
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	97.47
PRK07682	378	hypothetical protein; Validated	97.43
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	97.39
PRK13034	416	serine hydroxymethyltransferase; Reviewed	97.37
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	97.35
PRK00950	361	histidinol-phosphate aminotransferase; Validated	97.34
PRK13580	493	serine hydroxymethyltransferase; Provisional	97.32
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	97.31
PRK05764	393	aspartate aminotransferase; Provisional	97.25
PRK07550	386	hypothetical protein; Provisional	97.22
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	97.22
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	97.18
PRK06425	332	histidinol-phosphate aminotransferase; Validated	97.1
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	97.07
PRK09105	370	putative aminotransferase; Provisional	97.03
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	97.01
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	97.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	96.99
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	96.96
PRK10874	401	cysteine sulfinate desulfinase; Provisional	96.94
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	96.88
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	96.88
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	96.87
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	96.84
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	96.83
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	96.81
PRK06358	354	threonine-phosphate decarboxylase; Provisional	96.69
PTZ00094	452	serine hydroxymethyltransferase; Provisional	96.68
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	96.66
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	96.66
PRK07908	349	hypothetical protein; Provisional	96.64
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	96.62
PRK07568	397	aspartate aminotransferase; Provisional	96.58
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	96.56
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	96.54
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	96.49
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	96.47
PRK10534	333	L-threonine aldolase; Provisional	96.47
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	96.45
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	96.44
PRK06348	384	aspartate aminotransferase; Provisional	96.4
PRK06290	410	aspartate aminotransferase; Provisional	96.36
PRK06207	405	aspartate aminotransferase; Provisional	96.34
PRK02948	381	cysteine desulfurase; Provisional	96.31
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	96.25
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	96.23
PRK08960	387	hypothetical protein; Provisional	96.22
PLN00175	413	aminotransferase family protein; Provisional	96.21
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	96.16
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	96.14
PRK07777	387	aminotransferase; Validated	96.11
PRK07681	399	aspartate aminotransferase; Provisional	96.1
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	96.09
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	96.07
PRK08056	356	threonine-phosphate decarboxylase; Provisional	95.94
PRK09082	386	methionine aminotransferase; Validated	95.92
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	95.83
PRK08912	387	hypothetical protein; Provisional	95.81
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	95.71
PRK03080	378	phosphoserine aminotransferase; Provisional	95.69
PLN02409	401	serine--glyoxylate aminotransaminase	95.68
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	95.66
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	95.66
PRK07392	360	threonine-phosphate decarboxylase; Validated	95.66
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	95.64
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	95.58
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	95.57
PRK08175	395	aminotransferase; Validated	95.53
PRK08068	389	transaminase; Reviewed	95.51
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	95.42
PRK08361	391	aspartate aminotransferase; Provisional	95.39
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	95.39
PRK01533	366	histidinol-phosphate aminotransferase; Validated	95.37
PRK07366	388	succinyldiaminopimelate transaminase; Validated	95.36
PRK07582	366	cystathionine gamma-lyase; Validated	95.23
PRK05942	394	aspartate aminotransferase; Provisional	95.1
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	95.04
PRK09148	405	aminotransferase; Validated	94.93
PRK07309	391	aromatic amino acid aminotransferase; Validated	94.93
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	94.92
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	94.91
PRK06767	386	methionine gamma-lyase; Provisional	94.81
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	94.8
PRK12414	384	putative aminotransferase; Provisional	94.77
PRK05957	389	aspartate aminotransferase; Provisional	94.76
KOG1357|consensus	519		94.7
PLN03226	475	serine hydroxymethyltransferase; Provisional	94.64
PRK08636	403	aspartate aminotransferase; Provisional	94.59
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	94.59
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	94.52
PRK07683	387	aminotransferase A; Validated	94.51
PRK08354	311	putative aminotransferase; Provisional	94.46
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	94.42
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	94.37
PLN02651	364	cysteine desulfurase	94.34
PRK08363	398	alanine aminotransferase; Validated	94.22
KOG1360|consensus	570		94.17
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	94.14
KOG1358|consensus	467		93.94
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	93.93
PRK06460	376	hypothetical protein; Provisional	93.73
PRK05839	374	hypothetical protein; Provisional	93.72
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	93.65
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	93.6
PRK06836	394	aspartate aminotransferase; Provisional	93.36
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	93.25
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	92.9
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	92.88
PRK05968	389	hypothetical protein; Provisional	92.85
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	92.63
PRK04366	481	glycine dehydrogenase subunit 2; Validated	92.54
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	92.42
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	92.32
PTZ00433	412	tyrosine aminotransferase; Provisional	92.28
PLN02242	418	methionine gamma-lyase	92.05
PRK07337	388	aminotransferase; Validated	92.03
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	91.8
PRK07049	427	methionine gamma-lyase; Validated	91.55
PRK08249	398	cystathionine gamma-synthase; Provisional	91.22
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	91.16
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	90.93
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	90.82
PLN02452	365	phosphoserine transaminase	89.99
PTZ00376	404	aspartate aminotransferase; Provisional	89.43
PRK08045	386	cystathionine gamma-synthase; Provisional	88.64
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	88.62
PRK09265	404	aminotransferase AlaT; Validated	88.47
PRK06107	402	aspartate aminotransferase; Provisional	88.44
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	88.2
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	88.11
PRK08776	405	cystathionine gamma-synthase; Provisional	87.99
PRK06855	433	aminotransferase; Validated	87.63
PRK07811	388	cystathionine gamma-synthase; Provisional	87.55
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	87.36
PLN02724	805	Molybdenum cofactor sulfurase	86.82
PRK14012	404	cysteine desulfurase; Provisional	86.69
PLN02187	462	rooty/superroot1	86.15
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	85.14
PRK07269	364	cystathionine gamma-synthase; Reviewed	84.77
PLN02656	409	tyrosine transaminase	84.6
PRK07050	394	cystathionine beta-lyase; Provisional	84.39
KOG1368|consensus	384		84.14
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	84.09
PRK05367	954	glycine dehydrogenase; Provisional	83.92
PTZ00377	481	alanine aminotransferase; Provisional	82.57
PRK08637	388	hypothetical protein; Provisional	82.18
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	82.0
PRK08574	385	cystathionine gamma-synthase; Provisional	81.78
PRK00451	447	glycine dehydrogenase subunit 1; Validated	81.62
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	81.61
KOG2862|consensus	385		81.51
PRK08247	366	cystathionine gamma-synthase; Reviewed	80.57

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-44  Score=359.09  Aligned_cols=181  Identities=27%  Similarity=0.392  Sum_probs=168.0

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ++-+||+|||+|||||||||||+|||+||+||+||   ++|+|+||+ |+|+|++++++|+ +.        +..|++||
T Consensus       251 ~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~-Pl~avv~r~ei~~-~~--------~g~~~~Tf  320 (447)
T COG0160         251 LCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGL-PLSAVVGRAEIMD-WP--------PGGHGGTF  320 (447)
T ss_pred             HHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCC-ceeEEeccHHhcc-cC--------CcccCCCC
Confidence            45679999999999999999999999999999999   689999995 9999999999998 43        36899999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +|| ++|++++++ +++++   ++|++++|++|+++|++|+++||.|++|||+|+|+||||..++.+++| +.+.+.+++
T Consensus       321 ~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p-~~~~~~~i~  399 (447)
T COG0160         321 GGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEP-DAELAAKIV  399 (447)
T ss_pred             CcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCC-CHHHHHHHH
Confidence            999 999999999 98876   899999999999999999999999999999999999999987766655 457889999


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++..||..+|++||.|||+|   +++++|+.++++
T Consensus       400 ~~~~~~Glil~~~G~~~nviRi~PPL~i---s~e~~d~~l~il  439 (447)
T COG0160         400 ARAFERGLLLLTCGPHGNVLRILPPLTI---SDEELDEGLDIL  439 (447)
T ss_pred             HHHHHcCCEEeccCCCCcEEEEeCCccc---CHHHHHHHHHHH
Confidence            9999999999999999999999999999   589999999986

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=2.2e-43  Score=350.58  Aligned_cols=185  Identities=23%  Similarity=0.312  Sum_probs=170.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||||||+|||+|||||||++||+|++||+||   ++|+|+|||+|+||++++++|++.|....   ...+.||.||+
T Consensus       245 C~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~---~~~f~HG~TYs  321 (449)
T COG0161         245 CDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD---AGAFMHGHTYS  321 (449)
T ss_pred             HHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc---CCeeccCCccc
Confidence            4578999999999999999999999999999999   68999999999999999999999998521   44689999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      || +|||+|+++ +++++   ++|++++|.+|.++|+++..+||.|++|||.|+|.+|||..++.++.||+.....++..
T Consensus       322 ghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~  401 (449)
T COG0161         322 GNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRA  401 (449)
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHH
Confidence            99 999999999 99986   89999999999999999777889999999999999999999988888885556788899


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++++||+++|.   ++++.++|||+|   |++|||+++++.
T Consensus       402 ~~~e~Gl~iRp~---g~~i~~~PPlii---t~~eid~l~~~l  437 (449)
T COG0161         402 AALERGLLIRPL---GDVIYLMPPLII---TREEIDELVDAL  437 (449)
T ss_pred             HHHHCCeEEeec---CCEEEEcCCccC---CHHHHHHHHHHH
Confidence            999999999995   689999999999   589999999985

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.6e-42  Score=338.74  Aligned_cols=172  Identities=22%  Similarity=0.343  Sum_probs=156.6

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-.||+|||+||||||+||||++||+||+||+||   ++|+|||| +|+||+++++++++.+.        ++.||+||
T Consensus       213 lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG-~PigA~la~~~~~~~~~--------~G~HgSTf  283 (404)
T COG4992         213 LCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGG-FPIGAMLATEEIASAFT--------PGDHGSTF  283 (404)
T ss_pred             HHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCC-ccceeeEEchhhhhcCC--------CCcccCCC
Confidence            45678999999999999999999999999999999   68999999 59999999977777665        37999999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +|| +||++++++ +++.+   +++++++|++|+++|+++..+||.+.+|||+|||+|++|..+.         .+..++
T Consensus       284 GGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~---------~a~~~~  354 (404)
T COG4992         284 GGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY---------RARDIV  354 (404)
T ss_pred             CcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc---------cHHHHH
Confidence            999 999999999 88765   8999999999999999999999999999999999999997531         356799


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.+++  +|+|||+|||+|   +++|||+.++++
T Consensus       355 ~~~~~~gvL~~~a~--~~ViR~~PpL~i---~~eei~~~~~~l  392 (404)
T COG4992         355 RALREEGVLVLPAG--PNVIRFLPPLVI---TEEEIDEALDAL  392 (404)
T ss_pred             HHHHHCCeEEecCC--CCeEEecCCccC---CHHHHHHHHHHH
Confidence            99999999999875  689999999999   589999999975

>KOG1404|consensus

Probab=100.00  E-value=8.2e-40  Score=315.81  Aligned_cols=181  Identities=27%  Similarity=0.409  Sum_probs=161.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .++|.|+|+|||||||||||.||++|..||.||   |+|+|||| +|+|||++++||++.+.+       ...|..||+|
T Consensus       243 ~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~-------~~~~fnTygg  314 (442)
T KOG1404|consen  243 RKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQ-------KSSHFNTYGG  314 (442)
T ss_pred             HHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHh-------ccccccccCC
Confidence            468999999999999999999999999999999   68999999 599999999999999875       1348999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|++++++ +++++   .+++++.|++|+++|.++.++||+|++|||+|||+|+||.+++....|-.......+...
T Consensus       315 nP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~  394 (442)
T KOG1404|consen  315 NPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQ  394 (442)
T ss_pred             CchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHH
Confidence            9 999999999 99977   899999999999999999999999999999999999999987742222123456778999


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      |.++|+++...+..++++|+.|||||   |++|||.+.+.
T Consensus       395 cke~Gvlvg~g~i~G~vfriaPPlci---T~edi~f~~~~  431 (442)
T KOG1404|consen  395 CKELGVLVGKGGIHGNVFRIAPPLCI---TKEDIDFAVEY  431 (442)
T ss_pred             HHHhCeeeecccccceEEEecCCeec---cHHHHHHHHHH
Confidence            99999999887778999999999999   58999777664

>PRK07483 hypothetical protein; Provisional

Probab=100.00  E-value=9.9e-39  Score=320.26  Aligned_cols=187  Identities=19%  Similarity=0.239  Sum_probs=163.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++++.+..   . ...+.|++||+
T Consensus       230 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~---~-~~~~~h~~T~~  305 (443)
T PRK07483        230 CDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIAD---G-SGFFQHGHTYL  305 (443)
T ss_pred             HHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhc---C-CCccccCCCCC
Confidence            4578999999999999999999999999999999   689999998899999999999998863   1 01257999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|++++++||.+.+|||.|+|++|+|..++..+.|++.  .....+
T Consensus       306 gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~  385 (443)
T PRK07483        306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARI  385 (443)
T ss_pred             CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHH
Confidence            99 999999999 99876   899999999999999999989999999999999999999765444444432  356778


Q ss_pred             HHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++.|+++||++.+++.     .+++++|.|||++   |++|||++++++
T Consensus       386 ~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~i---t~~eid~~~~~l  431 (443)
T PRK07483        386 KREAMARGLMVYPMGGTIDGVRGDHVLLAPPFII---TAAQIDEIVERL  431 (443)
T ss_pred             HHHHHHCCcEEEecCccccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            9999999999987642     3689999999999   589999999985

>PRK05965 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-38  Score=321.27  Aligned_cols=187  Identities=21%  Similarity=0.232  Sum_probs=161.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++|+.+.+. ......+.|++||+
T Consensus       245 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~  323 (459)
T PRK05965        245 CRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADG-AGAAAPVGHGYTYS  323 (459)
T ss_pred             HHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhcc-ccccccccccCCCC
Confidence            3468999999999999999999999999999999   6899999988999999999999988631 11111257999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. +||.+.+|||.|+|++|+|..++..+.+++.  .....+
T Consensus       324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i  402 (459)
T PRK05965        324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRI  402 (459)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHH
Confidence            99 999999999 99976   8999999999999999986 5999999999999999999765433334332  356788


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++.++|  .++|++.|||++   |++|||++++++
T Consensus       403 ~~~~~~~Gll~~~~g--~~~i~~~PpL~i---t~~ei~~~~~~l  441 (459)
T PRK05965        403 FDRAYANGLVFRAFG--DGVLGFAPALCC---TEGEFDLIFERT  441 (459)
T ss_pred             HHHHHhCCeEEEecC--CcEEEEECCCcC---CHHHHHHHHHHH
Confidence            999999999998764  589999999999   589999999986

>PRK07482 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-38  Score=319.29  Aligned_cols=189  Identities=18%  Similarity=0.232  Sum_probs=162.8

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++|+.+... ......+.|++||+
T Consensus       250 c~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~  328 (461)
T PRK07482        250 LKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQG-SDEHGAIGHGWTYS  328 (461)
T ss_pred             HHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcc-cccCCccccCCCCC
Confidence            4578999999999999999999999999999999   6899999988999999999999987631 11011357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH--HHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR--HMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~--~~~~~  153 (329)
                      || ++|++++++ +++++   +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..++..+.|++..  ....+
T Consensus       329 gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i  408 (461)
T PRK07482        329 GHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQV  408 (461)
T ss_pred             cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHH
Confidence            99 999999999 98876   8999999999999999999999999999999999999998654444555432  45788


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +..|+++||++.+. +.+++++|.|||++   |++|||++++++
T Consensus       409 ~~~~~~~Gvl~~~~-~~~~~i~~~Ppl~i---t~~ei~~~~~~l  448 (461)
T PRK07482        409 SAAALERGVIARAM-PHGDILGFAPPLVL---TRAEADEIVAIA  448 (461)
T ss_pred             HHHHHHCCcEEecC-CCCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            99999999998653 23689999999999   589999999986

>PRK07678 aminotransferase; Validated

Probab=100.00  E-value=3.6e-38  Score=316.75  Aligned_cols=189  Identities=24%  Similarity=0.380  Sum_probs=163.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|++|++||+||   ++|+|+||++|+||++++++||+.+.+  ......+.|++||+
T Consensus       243 c~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~--~~~~~~~~h~~T~~  320 (451)
T PRK07678        243 CQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKG--KGEYEHFRHVNTFG  320 (451)
T ss_pred             HHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhc--cCcccccccCCCCC
Confidence            4578999999999999999999999999999999   689999998899999999999998863  11111357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..+.....|.+.+....++.
T Consensus       321 gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~  400 (451)
T PRK07678        321 GNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVA  400 (451)
T ss_pred             cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHH
Confidence            99 999999999 98876   89999999999999999888899999999999999999976543333434456778999


Q ss_pred             HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.++    .+++++|.|||++   |++|||++++++
T Consensus       401 ~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~i---t~~eid~~~~~l  443 (451)
T PRK07678        401 ACKEKGLIIGKNGDTVAGYNNVLTLSPPLVI---SSEEIAFIVGTL  443 (451)
T ss_pred             HHHHCCcEEeecCccccCCCCEEEEECCCcC---CHHHHHHHHHHH
Confidence            99999999987542    2589999999999   589999999986

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=4.3e-38  Score=318.04  Aligned_cols=185  Identities=14%  Similarity=0.216  Sum_probs=159.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||++++++||+.+..  ......+.|++||+
T Consensus       267 c~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~--~~~~~~~~h~~T~~  344 (472)
T PRK08742        267 CDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLD--DSRERAFLHSHSYT  344 (472)
T ss_pred             HHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhc--cCccCccCcCCCCC
Confidence            3468999999999999999999999999999999   689999998899999999999998753  11112367999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      || ++|++++++ +++++   +++++++|++|++.++.+ ++||.+.+|||.|+|++|+|..++..+.++..  .....+
T Consensus       345 gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~  423 (472)
T PRK08742        345 GNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHA  423 (472)
T ss_pred             ccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHH
Confidence            99 999999999 99876   799999999999877776 56999999999999999999765544444432  245778


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|+++||++.++   +|+|+|.|||+++   ++|||++++++
T Consensus       424 ~~~~~~~Gll~~~~---g~vi~~~PpL~it---~~ei~~~~~~l  461 (472)
T PRK08742        424 YRAALARGVVLRPL---GDVLYWMPPYCVD---EAQLALLADTT  461 (472)
T ss_pred             HHHHHHCCeEEEec---CCEEEEECCCCCC---HHHHHHHHHHH
Confidence            89999999999875   4899999999994   79999999985

>PRK07481 hypothetical protein; Provisional

Probab=100.00  E-value=6.4e-38  Score=314.80  Aligned_cols=187  Identities=22%  Similarity=0.313  Sum_probs=161.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++|+.+.+. ......+.|++||+
T Consensus       243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~  321 (449)
T PRK07481        243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEAN-ADFGGAIMHGYTYS  321 (449)
T ss_pred             HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhcc-CccccccccCCCCC
Confidence            4568999999999999999999999999999999   6899999988999999999999988631 11112357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|++++++||.+.+|||.|+|++|+|..+...+.+++  ......+
T Consensus       322 gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~  401 (449)
T PRK07481        322 GHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAV  401 (449)
T ss_pred             CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHH
Confidence            99 999999999 88876   89999999999999999999999999999999999999975543333433  2456788


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|+++||++.++   +++++|.|||++   |++|||++++++
T Consensus       402 ~~~~~~~Gvl~~~~---g~~i~l~Ppl~i---t~~eid~~~~~l  439 (449)
T PRK07481        402 ADVARENGVLVRPS---GTKIILSPPLVI---QREDVDRIVDAL  439 (449)
T ss_pred             HHHHHhCCeEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            89999999999885   367999999999   589999999985

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=6.9e-38  Score=315.92  Aligned_cols=181  Identities=24%  Similarity=0.359  Sum_probs=157.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||+|||+|||||||||||.+|+++++||+||   ++|+|+|| +|+||+++++++ +.+.        ...|++||+
T Consensus       261 c~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~--------~~~~~~T~~  330 (464)
T PRK06938        261 TEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQ--------PGAHAGTFR  330 (464)
T ss_pred             HHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCC-CceEEEeehhHh-hccC--------CCCCCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999999885 6553        256999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~  150 (329)
                      || ++|++++++ +++++   +++++++|++|+++|++++++||.+.+|||.|+|++|+|..++...     .+.+....
T Consensus       331 gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~  410 (464)
T PRK06938        331 GNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELA  410 (464)
T ss_pred             cCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHH
Confidence            99 999999999 88866   8999999999999999999999999999999999999997543221     12123456


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++..|+++||++.+++..+++|+|.|||++   |++|||++++++
T Consensus       411 ~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~i---t~~eid~~~~~l  454 (464)
T PRK06938        411 SLIQRECLRRGLILELGGRHGSVVRFLPPLII---TAEQIDEVAEIF  454 (464)
T ss_pred             HHHHHHHHHCCeEEeecCCCCCEEEEECCCcc---CHHHHHHHHHHH
Confidence            77899999999999876655799999999999   589999999986

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.5e-37  Score=313.66  Aligned_cols=186  Identities=18%  Similarity=0.273  Sum_probs=160.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||++++++||+.+... ......+.|++||+
T Consensus       245 c~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~-~~~~~~~~h~~T~~  323 (466)
T PRK07030        245 CDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDD-YPTLRAFLHSHSYT  323 (466)
T ss_pred             HHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcc-cccccccccCCCCC
Confidence            3468999999999999999999999999999999   6899999988999999999999988531 11112357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. +||.+.+|||+|+|++|+|..++..+.|+..  .....+
T Consensus       324 gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i  402 (466)
T PRK07030        324 GNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKV  402 (466)
T ss_pred             CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHH
Confidence            99 999999999 98876   8999999999999999995 6999999999999999999765544444432  234678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|+++||++.++   +++++|.|||++   |++|||++++++
T Consensus       403 ~~~~~~~Gvl~~~~---g~~i~~~Ppl~i---t~~eid~~~~~l  440 (466)
T PRK07030        403 YQHALERGALLRPL---GSVVYFLPPYVI---TPEQIDFLAEVA  440 (466)
T ss_pred             HHHHHHCCeEEEec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence            99999999999875   479999999999   589999999986

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=2.6e-37  Score=310.89  Aligned_cols=181  Identities=15%  Similarity=0.221  Sum_probs=157.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++|+.+..  ......+.|++||+
T Consensus       252 c~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~--~~~~~~~~~~~T~~  329 (453)
T PRK06943        252 CDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYD--DDVTRGFLHSHSYT  329 (453)
T ss_pred             HHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcc--cCccCCccCCCCCC
Confidence            3468999999999999999999999999999999   689999998899999999999998863  11111257999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      || ++|++++++ +++++   +++++++|++|+++|+++. +++.+.+|||.|+|++|+|..+..   + +......++.
T Consensus       330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~~---~-~~~~~~~i~~  404 (453)
T PRK06943        330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDGD---A-ARTFSRRFFE  404 (453)
T ss_pred             CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCCC---c-chHHHHHHHH
Confidence            99 999999999 99876   8999999999999999995 588899999999999999974321   1 1245678899


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.++   +++++|.|||++   |++|||++++++
T Consensus       405 ~~~~~Gll~~~~---g~~l~~~Ppl~i---t~~eid~~~~~l  440 (453)
T PRK06943        405 AALERELLLRPI---GTTVYLMPPYVL---DDDEIAWLAERT  440 (453)
T ss_pred             HHHHCCcEEEec---CCEEEEeCCCcC---CHHHHHHHHHHH
Confidence            999999999875   478999999999   589999999985

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=3.1e-37  Score=310.74  Aligned_cols=181  Identities=24%  Similarity=0.401  Sum_probs=157.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||.+|+++++||+||   ++|+|+|| +|+||+++++++ +.+.+        ..|++||+
T Consensus       255 c~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~~--------~~~~~T~~  324 (459)
T PRK06931        255 TQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQP--------GGHTGTFR  324 (459)
T ss_pred             HHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCC-cceeeeeeHHHH-hhccC--------CCCCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999998874 65532        56999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~  150 (329)
                      || ++|++++++ +++++   +++++++|++|+++|++++++||.+.+|||.|+|++|+|.+++..+     .+.+.+..
T Consensus       325 gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~  404 (459)
T PRK06931        325 GNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELA  404 (459)
T ss_pred             CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHH
Confidence            99 999999999 98876   8999999999999999999999999999999999999997543221     11123456


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++..|+++||++.+.+..+|+++|.|||++   |++|||++++++
T Consensus       405 ~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~i---t~~eid~~~~~l  448 (459)
T PRK06931        405 AAIQKACFENGLLLERGGRNGNVVRLLPPLLI---TQAECEEFIDRF  448 (459)
T ss_pred             HHHHHHHHHCCcEEeecCCCCCEEEEECCCCc---CHHHHHHHHHHH
Confidence            78899999999999887656799999999999   589999999986

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=100.00  E-value=7.6e-37  Score=311.18  Aligned_cols=186  Identities=18%  Similarity=0.218  Sum_probs=160.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||+|||+|||||||||||.+|+++++||+||   ++|+|+|||+|+||++++++||+.+... ......+.|++||+
T Consensus       290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~-~~~~~~~~h~~T~~  368 (504)
T PLN02760        290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQ-SNKLGSFAHGFTYS  368 (504)
T ss_pred             HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcc-cccccCcccCCCCC
Confidence            4578999999999999999999999999999999   6899999988999999999999988631 11111357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++ .++|.+.+|||.|+|++|+|..++..+.++.  .+....+
T Consensus       369 gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i  447 (504)
T PLN02760        369 GHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYF  447 (504)
T ss_pred             CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHH
Confidence            99 999999999 88876   899999999999999998 6789999999999999999976544333432  2356778


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++.+.   +++++|.|||++   |++|||++++++
T Consensus       448 ~~~~~~~Gvl~~~~---g~~lrl~Ppl~i---t~eeid~~~~~l  485 (504)
T PLN02760        448 GAECKKRGMLVRVA---GDNIMMSPPLII---TPEEVDELISIY  485 (504)
T ss_pred             HHHHHhCCcEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            99999999999874   478999999999   589999999986

>PRK06917 hypothetical protein; Provisional

Probab=100.00  E-value=8.2e-37  Score=306.72  Aligned_cols=188  Identities=21%  Similarity=0.294  Sum_probs=163.8

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-+||++||+|||||||||||.+|+++++||+||   ++|+|+|||+|+||+++++++|+.+..   . ...+.|++||
T Consensus       229 lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~---~-~~~~~~~~T~  304 (447)
T PRK06917        229 ICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILR---G-SRSIMSGHTL  304 (447)
T ss_pred             HHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhc---c-CcccccccCC
Confidence            34568999999999999999999999999999999   689999998899999999999998863   1 1135799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTH  152 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~  152 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++.+++|.+.+|||.|+|++|+|..++..+.++.  .+....
T Consensus       305 ~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~  384 (447)
T PRK06917        305 SANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASE  384 (447)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHH
Confidence            999 999999999 88865   89999999999999999999999999999999999999986544444442  246778


Q ss_pred             HHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +++.|+++||++.+++     ..+|+++|.|||++   |++|||++++++
T Consensus       385 ~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~i---t~~eid~~~~~l  431 (447)
T PRK06917        385 LISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTI---TYSELDELLSIF  431 (447)
T ss_pred             HHHHHHhCCcEEEecccccCCCCCCEEEEECCCcC---CHHHHHHHHHHH
Confidence            9999999999998753     23689999999999   589999999986

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=8.3e-37  Score=307.65  Aligned_cols=187  Identities=20%  Similarity=0.288  Sum_probs=160.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||+|||+|||||||||||.+|+++++||+||   ++|+|+||++|+||+++++++++.+..       .+.| +||+
T Consensus       258 c~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~-------~~~~-~T~~  329 (459)
T PRK06082        258 CDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQI-------SLGH-YTHE  329 (459)
T ss_pred             HHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccC-------CCCC-CCCC
Confidence            3478999999999999999999999999999999   689999998899999999999865431       2457 8999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..+...+.+ +.+....++.
T Consensus       330 gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~-~~~~~~~~~~  408 (459)
T PRK06082        330 KSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKER-AYDEAEAVLY  408 (459)
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCc-cHHHHHHHHH
Confidence            99 999999999 98876   899999999999999999999999999999999999999754432222 2245677889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY  205 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~  205 (329)
                      .|+++||++.+++  +++++|.|||++   |++|||++++++. .++.++
T Consensus       409 ~~~~~Gvl~~~~~--~~~i~~~Ppl~i---t~~eid~~~~~l~-~~l~~~  452 (459)
T PRK06082        409 RCLNNGLSFKVSQ--GNVIQLSPPLII---TREELTQALAILE-EAIAKI  452 (459)
T ss_pred             HHHhCCCEEEecC--CCEEEEeCCCcc---CHHHHHHHHHHHH-HHHHHH
Confidence            9999999998753  699999999999   5899999999863 344444

>PRK07480 putative aminotransferase; Validated

Probab=100.00  E-value=1.4e-36  Score=305.89  Aligned_cols=182  Identities=23%  Similarity=0.298  Sum_probs=157.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      -+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||++++++||+.+..  ..  ..+.|++||++
T Consensus       250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~--~~--~~~~~~~T~~g  325 (456)
T PRK07480        250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIE--EG--GEFNHGFTYSG  325 (456)
T ss_pred             HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhc--CC--CCcccCCCCCc
Confidence            368999999999999999999999999999999   689999998899999999999998831  01  12579999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHH-HHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHT-YVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v-~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      | ++|++++++ +++++   ++++ +++|++|+++|+++ .+||.+.+|||.|+|++|+|..+...+.++..  .....+
T Consensus       326 npl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~  404 (456)
T PRK07480        326 HPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTIC  404 (456)
T ss_pred             CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHH
Confidence            9 999999999 98876   8999 69999999999996 57999999999999999999765443444422  234668


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|+++||++.++   +++++|.|||+|   |++|||++++++
T Consensus       405 ~~~~~~~Gll~~~~---~~~l~~~Ppl~i---t~~eid~~~~~l  442 (456)
T PRK07480        405 RDHCFANGLIMRAV---GDRMIISPPLVI---THAEIDELVEKA  442 (456)
T ss_pred             HHHHHHCCcEEeec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            88999999999874   489999999999   589999999986

>PRK07036 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-36  Score=306.29  Aligned_cols=185  Identities=23%  Similarity=0.230  Sum_probs=158.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhc-ccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQ-CLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e-~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      -+||+|||+|||||||||||++|+++ ++||+||   ++|+|+|||+|+||++++++||+.+... ......+.|++||+
T Consensus       251 ~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~-~~~~~~~~~~~T~~  329 (466)
T PRK07036        251 RRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGP-NAKGNVFTHGFTYS  329 (466)
T ss_pred             HHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcc-cCcCcccccCCCCC
Confidence            46899999999999999999999998 7999999   6899999988999999999999988631 01111357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++ ++||.+.+|||.|+|++|+|..++..+.++.  ......+
T Consensus       330 gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~  408 (466)
T PRK07036        330 GHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRI  408 (466)
T ss_pred             CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHH
Confidence            99 999999999 98866   899999999999999988 5799999999999999999986554443432  2356788


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|+++||++.+.   +++++|.|||++   |++|||++++++
T Consensus       409 ~~~~~~~Gvl~~~~---~~~~~l~Ppl~i---t~~~id~~~~~l  446 (466)
T PRK07036        409 DRHCQERGLLVRPL---EHLCVLSPPLII---TRAQIDEIVAIL  446 (466)
T ss_pred             HHHHHHCCcEEeec---CCEEEEeCCCcC---CHHHHHHHHHHH
Confidence            99999999999875   478999999999   489999999985

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=100.00  E-value=1.2e-36  Score=305.40  Aligned_cols=176  Identities=13%  Similarity=0.186  Sum_probs=158.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||||||||||++|+++++||+||   ++|+|+||++|+||+++++++++.+..      .++.|++||+
T Consensus       254 c~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~------~~~~~~~T~~  327 (442)
T TIGR03372       254 CDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD------NPFLHTTTFG  327 (442)
T ss_pred             HHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhc------cCccccCCCC
Confidence            3478999999999999999999999999999999   689999998899999999999998742      1367999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      || ++|++++++ +++++   +++++++|++|+++|+++..+|| .+.+|||.|+|++|+|.++         .....++
T Consensus       328 gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~---------~~~~~i~  398 (442)
T TIGR03372       328 GNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN---------EIGYAFA  398 (442)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh---------HHHHHHH
Confidence            99 999999999 98875   89999999999999999999998 7899999999999999742         3456789


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.++++.++++||.|||++   |++|||++++++
T Consensus       399 ~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~---t~~~id~~~~~l  438 (442)
T TIGR03372       399 KELFQQNILVAGTLNNAKSIRIEPPLTI---TIEQCALVIKAA  438 (442)
T ss_pred             HHHHHCCcEEeecCCCCCEEEEECCccc---CHHHHHHHHHHH
Confidence            9999999999876655799999999999   589999999985

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK06105 aminotransferase; Provisional

Probab=100.00  E-value=2.2e-36  Score=304.55  Aligned_cols=186  Identities=24%  Similarity=0.310  Sum_probs=160.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+||++|+||+++++++++.+... ......+.|++||+
T Consensus       248 c~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~-~~~~~~~~h~~T~~  326 (460)
T PRK06105        248 LRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADE-SGKIGTFGHGFTAS  326 (460)
T ss_pred             HHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcc-cccCcccccCCCCC
Confidence            4578999999999999999999999999999999   6899999988999999999999987631 11111356999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++ ++||.+.+|||+|+|++|+|..+...+.+++.  .....+
T Consensus       327 gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i  405 (460)
T PRK06105        327 GHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARA  405 (460)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHH
Confidence            99 999999999 88876   899999999999999999 78999999999999999999765444445432  345678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|+++||++.++   +++++|.|||++   |++|||++++++
T Consensus       406 ~~~~~~~Gvl~~~~---g~~i~l~Ppl~i---t~~eid~~~~~l  443 (460)
T PRK06105        406 NAAAHEHGVISRAM---GDTLAFCPPLII---TAAQVDEMVDRF  443 (460)
T ss_pred             HHHHHHCCeEEEec---CCEEEEECCCcc---CHHHHHHHHHHH
Confidence            89999999999875   479999999999   479999999986

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=2.2e-36  Score=304.62  Aligned_cols=186  Identities=23%  Similarity=0.283  Sum_probs=160.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++++.+.+. ......+.|++||+
T Consensus       254 c~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~-~~~~~~~~~~~T~~  332 (460)
T PRK06916        254 CTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGD-YEEQKTFFHGHSYT  332 (460)
T ss_pred             HHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhcc-ccccCccccCCCCC
Confidence            4468999999999999999999999999999999   6899999988999999999999987631 11112357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.+ ++.+.+|||.|+|++|+|..++..+.++..  .....+
T Consensus       333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i  411 (460)
T PRK06916        333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQV  411 (460)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhHHHHH
Confidence            99 999999999 88876   89999999999999999975 899999999999999999865544444422  245678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +..|+++||++.+.   +++++|.|||++   |++|||++++++
T Consensus       412 ~~~~~~~Gvl~~~~---g~~l~~~Ppl~i---t~~~id~~~~~l  449 (460)
T PRK06916        412 CKRSRELGMLTRPL---GNTIVFMPPLAS---TIDELDEMLRIL  449 (460)
T ss_pred             HHHHHHCCeEEEec---CCEEEEeCCccc---CHHHHHHHHHHH
Confidence            99999999999875   489999999999   589999999986

>PRK06062 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-36  Score=304.48  Aligned_cols=182  Identities=23%  Similarity=0.297  Sum_probs=159.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||.+|+++++||+||   ++|+|+|||+|+||+++++++|+.+..   .   .+.|++||+
T Consensus       244 c~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~---~---~~~~~~T~~  317 (451)
T PRK06062        244 CDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD---R---PYPGGLTYS  317 (451)
T ss_pred             HHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc---C---CCCCCCCCC
Confidence            4578999999999999999999999999999999   689999998899999999999998752   1   257999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHH-HHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh-----HH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVG-NFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS-----RH  149 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG-~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~-----~~  149 (329)
                      +| ++|++++++ +++++   +++++++| ++|+++|+++.+++|.+.+|||.|+|++|+|..++..+.|++.     ..
T Consensus       318 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~  397 (451)
T PRK06062        318 GHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAA  397 (451)
T ss_pred             CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHH
Confidence            99 999999999 98876   89999999 6999999999999999999999999999999754433333322     25


Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+++.|+++||++.+.   +++++|.|||++   |++|||++++++
T Consensus       398 ~~~~~~~l~~~Gvl~~~~---~~~lrl~ppl~~---t~~eid~~~~~l  439 (451)
T PRK06062        398 MAAVKAACKERGLLPFVN---GNRIHVVPPCTV---TEDEVREGLAIL  439 (451)
T ss_pred             HHHHHHHHHHCCcEEeec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence            678899999999998763   589999999998   589999999986

>PRK12403 putative aminotransferase; Provisional

Probab=100.00  E-value=3.6e-36  Score=303.04  Aligned_cols=191  Identities=16%  Similarity=0.146  Sum_probs=161.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++++.+..  .  ...+.|++||+
T Consensus       252 c~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~--~--~~~~~~~~T~~  327 (460)
T PRK12403        252 CRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVE--Q--GGVFAHGLTYS  327 (460)
T ss_pred             HHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhc--C--CCccccCCCCC
Confidence            4468999999999999999999999999999999   689999998899999999999998753  1  12356999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHH-HHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTY-VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTH  152 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~-~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~  152 (329)
                      +| ++|++++++ +++++   +++++ ++|++|+++|+++.++||.+.+|||.|+|++++|..++..+.++..  .....
T Consensus       328 gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~  407 (460)
T PRK12403        328 GHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWR  407 (460)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHH
Confidence            99 999999999 99876   79996 9999999999999999999999999999999999765443333321  23455


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY  205 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~  205 (329)
                      +...|+++||++.+.   +++++|+|||+|   |++|||++++++. .+..++
T Consensus       408 ~~~~~~~~Gll~~~~---~~~~~l~Ppl~i---t~~eid~~~~~l~-~al~~~  453 (460)
T PRK12403        408 CRTIGFEEGVIIRST---LGRMIMAPALVA---GRAEIDELVDKTR-IAVDRT  453 (460)
T ss_pred             HHHHHHhCCEEEEec---CCEEEEECCCCC---CHHHHHHHHHHHH-HHHHHH
Confidence            778899999999864   367999999999   5899999999863 344443

>KOG1402|consensus

Probab=100.00  E-value=2.1e-36  Score=287.04  Aligned_cols=175  Identities=19%  Similarity=0.240  Sum_probs=156.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      -+|++|||+||||||+||||++||++|..|.||   ++|+|+||++|+|||+++++||..+.+        +.||+||+|
T Consensus       238 tkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~p--------geHgsTygg  309 (427)
T KOG1402|consen  238 TKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKP--------GEHGSTYGG  309 (427)
T ss_pred             HhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCC--------CccccccCC
Confidence            467899999999999999999999999999999   689999999999999999999988763        789999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      | ++|++++++ +++.+   +++++.+|+.|+..|.++..+.|. +.+|||+|++.+|+|.+.+..     ..-+..++-
T Consensus       310 NpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~-----~~~aw~~cl  384 (427)
T KOG1402|consen  310 NPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS-----GQDAWDVCL  384 (427)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc-----chhHHHHHH
Confidence            9 999999999 88865   899999999999999999999985 799999999999999754321     123556788


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.++|++.-|.  ++|+|||+|||+|+   ++|+++.+++.
T Consensus       385 ~lk~~g~LAkpt--H~~IiRfaPPL~I~---e~dl~eg~e~i  421 (427)
T KOG1402|consen  385 ALKENGLLAKPT--HGNIIRFAPPLVIS---EEDLREGIEAI  421 (427)
T ss_pred             cccccccccCCC--CCCeEEecCCcccC---HHHHHHHHHHH
Confidence            889999999884  68999999999995   79999999985

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=9e-36  Score=300.20  Aligned_cols=176  Identities=15%  Similarity=0.201  Sum_probs=158.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||+|||+|||||||||||++|+++++||+||   ++|+|+||++|+||+++++++++.+..   .   ++.|++||+
T Consensus       261 c~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~---~---~~~~~~T~~  334 (459)
T PRK11522        261 CDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD---N---PFLHTTTFG  334 (459)
T ss_pred             HHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc---C---CcccCCCCC
Confidence            3468999999999999999999999999999999   689999998899999999999987752   1   367999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      || ++|++++++ +++++   +++++++|++|+++|+++.++|| .+.+|||.|+|++|+|..+         +....+.
T Consensus       335 gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~---------~~~~~i~  405 (459)
T PRK11522        335 GNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN---------EIGYNFA  405 (459)
T ss_pred             CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc---------hHHHHHH
Confidence            99 999999999 88875   89999999999999999999998 7899999999999999742         3456789


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.+.+..++++||.||+++   |++|||++++++
T Consensus       406 ~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~---t~~~id~~l~~l  445 (459)
T PRK11522        406 SEMFRQRVLVAGTLNNAKTIRIEPPLTL---TIEQCEQVLKAA  445 (459)
T ss_pred             HHHHHCCeEEEecCCCCCEEEEECCccC---CHHHHHHHHHHH
Confidence            9999999999876556799999999999   589999999986

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-35  Score=296.59  Aligned_cols=180  Identities=18%  Similarity=0.228  Sum_probs=160.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||.+|+++++||+||   ++|+|+|| +|+||+++++++++.+..        ..|++||+
T Consensus       249 c~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~~--------~~~~~T~~  319 (443)
T PRK06058        249 CRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHP--------GGLGGTYG  319 (443)
T ss_pred             HHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCC-CccEEEEEcHHHHhhccC--------CCCCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999999999988753        46899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.++|+.+.+|||.|+|++++|..++. ..+ +.+....+..
T Consensus       320 gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~~-~~~~~~~l~~  397 (443)
T PRK06058        320 GNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT-TEP-DAELTKALAA  397 (443)
T ss_pred             CCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC-CCC-cHHHHHHHHH
Confidence            99 999999999 88866   89999999999999999999999999999999999999975432 122 3456788999


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++..+++|||.|||++   |++|||++++++
T Consensus       398 ~~~~~Gv~~~~~~~~~~~lr~~Ppl~~---t~~~i~~~~~~l  436 (443)
T PRK06058        398 AAHAAGVIVLTCGTYGNVIRLLPPLVI---GDELLREGLDVL  436 (443)
T ss_pred             HHHHCCeEEeccCCCCCEEEEECCCcc---CHHHHHHHHHHH
Confidence            999999999887656799999999999   589999999986

>PRK06148 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-35  Score=323.43  Aligned_cols=182  Identities=23%  Similarity=0.371  Sum_probs=161.9

Q ss_pred             cccccceEEehhHhhchhccch-hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      .-+||+|||+|||||||||||. +|+++++||+||   ++|+||||+ |+|||+++++||+.+..   +    ..|++||
T Consensus       814 c~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~-Plgav~~~~ei~~~~~~---g----~~~~~Tf  885 (1013)
T PRK06148        814 VRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIADSFDN---G----MEYFNTF  885 (1013)
T ss_pred             HHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCc-ceEEEEEcHHHHhhccC---C----CccccCC
Confidence            3468999999999999999996 999999999999   689999995 99999999999998753   1    2488999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +|| ++|++++++ +++++   +++++++|++|+++|++++++||.+.+|||.|+|++|+|..++..+.| +.+.+..++
T Consensus       886 ~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~-~~~~~~~i~  964 (1013)
T PRK06148        886 GGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP-ATAIARYVK  964 (1013)
T ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCc-cHHHHHHHH
Confidence            999 999999999 98876   899999999999999999999999999999999999999865443333 234677899


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.++|+.+++++|.|||++   |++|||++++++
T Consensus       965 ~~~~~~Gvl~~~~g~~~~vlr~~Ppl~i---t~~~id~~l~~l 1004 (1013)
T PRK06148        965 NGARERGILIGTEGPHDNVLKIRPPLIF---SRADADHLLEVL 1004 (1013)
T ss_pred             HHHHhCCeEEeccCCCCCEEEEeCCccC---CHHHHHHHHHHH
Confidence            9999999999988777899999999999   589999999986

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=100.00  E-value=1.5e-35  Score=296.86  Aligned_cols=180  Identities=21%  Similarity=0.321  Sum_probs=157.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      -+||+|||+|||||||||||++|+++++||+||   ++|+|+|| +|+|+++++++ ++.+..        ..|++||++
T Consensus       237 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~~--------~~~~~T~~g  306 (442)
T TIGR00709       237 RKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQP--------AGHTGTFRG  306 (442)
T ss_pred             HHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCC-cccEEEEEchH-HhccCC--------CcCCCCCCc
Confidence            468999999999999999999999999999999   68999999 59999999998 555532        468999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC---CC--ChHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV---PL--NSRHMT  151 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~---p~--~~~~~~  151 (329)
                      | ++|++++++ +++++   +++++++|++|+++|++++++||.+.+|||.|+|++|+|.+++.++.   ++  +.+...
T Consensus       307 npla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~  386 (442)
T TIGR00709       307 NQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAA  386 (442)
T ss_pred             CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHH
Confidence            9 999999999 88866   89999999999999999999999999999999999999975433221   11  224567


Q ss_pred             HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++..|+++||++.+.+..+++|++.|||++   |++|||++++++
T Consensus       387 ~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~i---t~~ei~~~~~~l  429 (442)
T TIGR00709       387 AIQGACFENGLLLETGGREGEVFRLLCPITI---DQEECEEGISRF  429 (442)
T ss_pred             HHHHHHHHCCeEEeecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            8899999999999887666899999999999   589999999986

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=1.9e-35  Score=314.24  Aligned_cols=185  Identities=14%  Similarity=0.050  Sum_probs=155.7

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||++++++||+.|..  ......+.|++||+
T Consensus       615 c~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~--~~~~~~~~hg~Ty~  692 (817)
T PLN02974        615 CRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRG--PSKLDALLHGHSYT  692 (817)
T ss_pred             HHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhcc--ccccCCcccCCCCC
Confidence            3468999999999999999999999999999999   689999999999999999999999863  11112467999999


Q ss_pred             cc-HHHHHHHHh-hHHhH-------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER-------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        81 gn-lA~aaala~-~ile~-------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      || ++|++++++ +++++       .++.++++++|.+.|.+...+||.|.+|||+|+|++|+|.++... .+|....+.
T Consensus       693 gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~~~~~a~  771 (817)
T PLN02974        693 AHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGYSSLYAR  771 (817)
T ss_pred             cCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-cccchHHHH
Confidence            99 999999999 88865       345666777777788544467999999999999999999865433 355445677


Q ss_pred             HHHHHHH-HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCK-EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~-e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|+ ++||++++.   +|+|+++||+++   +++|++++++++
T Consensus       772 ~v~~~~~~~~Gl~~r~~---Gnvi~l~pP~~i---~~e~l~~~~~~l  812 (817)
T PLN02974        772 SVVRRLRREDGIYARPL---GNVVYLMCGPTT---SPETCTRLLRKV  812 (817)
T ss_pred             HHHHHHHHhCCEEEEec---CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            8889999 999999985   589999999999   489999999975

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-34  Score=290.76  Aligned_cols=178  Identities=23%  Similarity=0.338  Sum_probs=156.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||+|||+|||||||||||.+|+++++||+||   ++|+|+||+ |+|++++++++++. ..        ..|.+||+
T Consensus       252 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~-pi~av~~~~~i~~~-~~--------~~~~~T~~  321 (457)
T PRK05639        252 LDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGM-GLSGVIGRKELMDL-TS--------GSALLTPA  321 (457)
T ss_pred             HHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCC-cceeEEehHHHHhh-cC--------CCcccCCC
Confidence            3468999999999999999999999999999999   689999995 99999999999983 21        34778999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++..+||.+.+|||.|+|++++|..+..  .+ +.+....+.+
T Consensus       322 g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~--~~-~~~~~~~~~~  398 (457)
T PRK05639        322 ANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG--KP-DPELTGKICW  398 (457)
T ss_pred             cCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC--CC-CHHHHHHHHH
Confidence            99 999999999 88876   89999999999999999999999999999999999999975322  12 2346678999


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.+..++++||.|||++   |++|||++++++
T Consensus       399 ~~~~~Gv~~~~~g~~~~~lr~~Ppl~i---t~~~id~~~~~l  437 (457)
T PRK05639        399 RAFELGLILPSYGMFGNVIRITPPLVI---TKEIAEKGLEIM  437 (457)
T ss_pred             HHHhCCeEEeecCCCCCEEEEeCCCcc---CHHHHHHHHHHH
Confidence            999999999887655799999999999   589999999986

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.4e-34  Score=288.70  Aligned_cols=176  Identities=16%  Similarity=0.111  Sum_probs=153.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||||||||||++|+++++||.||   ++|+|+|||+|+||+++++++++.+..  ......+.|++||+
T Consensus       231 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~--~~~~~~~~h~~T~~  308 (422)
T PRK05630        231 CDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLIST--PNGGGALMHGPTFM  308 (422)
T ss_pred             HHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhc--cCCCCccccCCCCc
Confidence            4568999999999999999999999999999999   689999998899999999999998853  11111357999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   .++++++|++|+++|+++. ++|.+.+|||+|+|++|+|..+.         ....+..
T Consensus       309 g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~---------~~~~~~~  378 (422)
T PRK05630        309 ANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV---------DMEEATQ  378 (422)
T ss_pred             CCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc---------cHHHHHH
Confidence            99 999999999 88876   7899999999999999875 48899999999999999996421         1346888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.   +++++|.|||++   |++|||++++++
T Consensus       379 ~~~~~Gl~~~~~---g~~l~~~PpL~i---t~~~i~~~~~~l  414 (422)
T PRK05630        379 AAVDHGVWLRPF---GRLVYVMPPYIT---TSEQIAQICAAL  414 (422)
T ss_pred             HHHHCCeEEEec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence            999999999875   489999999999   489999999985

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=100.00  E-value=1.2e-34  Score=289.71  Aligned_cols=176  Identities=16%  Similarity=0.109  Sum_probs=154.4

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||+|||+|||||||||||++|+++++||+||   ++|+|+|||+|+||+++++++++.+..   .....+.|++||
T Consensus       234 lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~---~~~~~~~~~~T~  310 (428)
T PRK07986        234 LCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISN---GEAGCFMHGPTF  310 (428)
T ss_pred             HHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhc---CCCCccccCCCC
Confidence            34578999999999999999999999999999999   689999998899999999999998863   111135699999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++. +|+.+.+|||.|+|+++++..+.         ....+.
T Consensus       311 ~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~---------~~~~~~  380 (428)
T PRK07986        311 MGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLR-DAPMVADVRVLGAIGVVETTRPV---------NMAALQ  380 (428)
T ss_pred             CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcc---------cHHHHH
Confidence            999 999999999 88876   8999999999999999986 48999999999999999996421         134688


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.++   +++++|.|||++   |++||+++++++
T Consensus       381 ~~l~~~Gl~~~~~---g~~i~~~Ppl~i---t~~ei~~~~~~l  417 (428)
T PRK07986        381 RFFVEQGVWIRPF---GKLIYLMPPYII---LPEQLQRLTAAV  417 (428)
T ss_pred             HHHHHCCcEEEec---CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            9999999999875   489999999999   589999999985

>PRK06149 hypothetical protein; Provisional

Probab=100.00  E-value=2.5e-34  Score=312.07  Aligned_cols=181  Identities=23%  Similarity=0.268  Sum_probs=160.1

Q ss_pred             ccccceEEehhHhhchhccch-hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      -+||+|||+|||||||||||. +|+++++||+||   ++|+|||| +|+|||+++++|++.|..   .    ..|.+||+
T Consensus       775 ~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~---~----~~~~sT~~  846 (972)
T PRK06149        775 RARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNG-HPLGAVITRREIAEALEA---E----GYFFSSTG  846 (972)
T ss_pred             HHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCC-eeeEEEEEcHHHHhhhcc---C----CcccCCCC
Confidence            468999999999999999997 789999999999   68999999 599999999999998752   1    24568899


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.++||.+.+|||.|+|+||||..+..++.+ +.+....++.
T Consensus       847 gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~-~~~~~~~i~~  925 (972)
T PRK06149        847 GSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP-ATEETAAICD  925 (972)
T ss_pred             CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCC-ChHHHHHHHH
Confidence            99 999999999 99876   899999999999999999999999999999999999999755433333 2355778999


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.++|..+|+|+|.|||++   |++|||++++++
T Consensus       926 ~l~~~Gvl~~~~g~~~~vl~~~Ppl~i---t~~~id~~~~~l  964 (972)
T PRK06149        926 RLLELGVIMQPTGDHLNILKIKPPLCL---DRESADFFVDML  964 (972)
T ss_pred             HHHhCCeEEeecCCCCCEEEEECCCcC---CHHHHHHHHHHH
Confidence            999999999998877799999999999   589999999986

>PRK06541 hypothetical protein; Provisional

Probab=100.00  E-value=9.1e-34  Score=285.68  Aligned_cols=186  Identities=21%  Similarity=0.204  Sum_probs=159.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||||||||||.+|+++++||+||   ++|+|+||++|+|++++++++++.+..  . . ..+.|++||+
T Consensus       251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~--~-~-~~~~~~~T~~  326 (460)
T PRK06541        251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLD--G-P-TMFLHGYTFG  326 (460)
T ss_pred             HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhc--C-C-CccccCCCCC
Confidence            3468999999999999999999999999999999   689999998899999999999998763  1 1 2467999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH-----HH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR-----HM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~-----~~  150 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.+ +|.+.+|||.|+|++|+|..++..+.|+...     ..
T Consensus       327 gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~  405 (460)
T PRK06541        327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLR  405 (460)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHH
Confidence            99 999999999 88765   89999999999999999976 8999999999999999997654444454322     22


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|+++||++.+.+...++|||.|||++   |++|||++++++
T Consensus       406 ~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~---t~~~id~~~~~l  449 (460)
T PRK06541        406 GFLSPALFEAGLYCRADDRGDPVVQLAPPLIS---GQEEFDEIEQIL  449 (460)
T ss_pred             HHHHHHHHhCCeEEEecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            46788999999999875334589999999999   589999999986

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.1e-33  Score=282.81  Aligned_cols=176  Identities=14%  Similarity=0.128  Sum_probs=153.9

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||++||+|||||||||||++|+++++||+||   ++|+|+|||+|+|+++++++|++.+.+   .....+.|++||
T Consensus       236 lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~---~~~~~~~~~~T~  312 (429)
T PRK06173        236 LCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICS---GEAKCFMHGPTF  312 (429)
T ss_pred             HHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhc---CCCCccccCCCC
Confidence            34578999999999999999999999999999999   689999998899999999999998752   111235799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++ .+++.+.+|||.|+|++|+|..+         .....+.
T Consensus       313 ~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~---------~~~~~i~  382 (429)
T PRK06173        313 MANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEP---------VNMATLQ  382 (429)
T ss_pred             CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCc---------ccHHHHH
Confidence            999 999999999 88875   899999999999999987 56888999999999999999642         1135688


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.+.   +++|+|.|||++   |++|||++++++
T Consensus       383 ~~l~e~Gi~v~~~---g~~l~~~Ppl~i---t~~ei~~~~~~l  419 (429)
T PRK06173        383 PRFVEHGIWVRPF---GKLVYIMPPFII---SPDELSQLTSGL  419 (429)
T ss_pred             HHHHHCCeEEEec---CCEEEEeCCccC---CHHHHHHHHHHH
Confidence            9999999999875   479999999999   489999999986

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=100.00  E-value=2.2e-33  Score=281.51  Aligned_cols=182  Identities=17%  Similarity=0.175  Sum_probs=155.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||||||||||.+|+++++||+||   ++|+|+||++|+||++++++|++.+... ......+.|++||+
T Consensus       245 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~-~~~~~~~~~~~T~~  323 (442)
T PRK13360        245 CDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQG-PEAGIEFFHGYTYS  323 (442)
T ss_pred             HHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcC-CccccccccCCCCC
Confidence            4578999999999999999999999999999999   6899999988999999999999987631 11111246999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. +++.+.+|||.|+|++++|......    +......+..
T Consensus       324 g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~~----~~~~~~~~~~  398 (442)
T PRK13360        324 GHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDGK----PGKRAYEVFL  398 (442)
T ss_pred             CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCCC----cchhHHHHHH
Confidence            99 999999999 98876   8999999999999999985 4888999999999999999743211    1234567888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.++   ++++||.|||++   |++|||++++++
T Consensus       399 ~l~~~Gvl~~~~---~~~lr~~Ppl~~---t~~eid~~~~~l  434 (442)
T PRK13360        399 KCFEKGLMIRYT---GDILALSPPLII---EEAQIDELFDIL  434 (442)
T ss_pred             HHHHCCcEEEec---CCEEEEeCCCcc---CHHHHHHHHHHH
Confidence            999999999874   479999999999   589999999986

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=100.00  E-value=3.6e-33  Score=280.26  Aligned_cols=182  Identities=16%  Similarity=0.200  Sum_probs=154.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||||||||||.+|+++++||+||   ++|+|+||++|+|+++++++|++.+.. .......+.|++||+
T Consensus       248 c~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~-~~~~~~~~~~~~T~~  326 (445)
T PRK09221        248 CDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQ-GPEYAIEFFHGYTYS  326 (445)
T ss_pred             HHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhcc-CcccccccccccCCC
Confidence            4568999999999999999999999999999999   689999998899999999999998753 001011246999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. ++|.+.+|||.|+|++++|......  +  ......+.+
T Consensus       327 ~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~~--~--~~~~~~~~~  401 (445)
T PRK09221        327 AHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPGA--P--GARGYEAFM  401 (445)
T ss_pred             cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEeccccc--c--cchHHHHHH
Confidence            99 999999999 88865   8999999999999999984 5888999999999999999742211  1  123456889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.   ++++||.|||++   |++|||++++++
T Consensus       402 ~~~~~Gv~~~~~---~~~lr~~Ppl~~---t~~eid~~~~~l  437 (445)
T PRK09221        402 KCFEKGLLVRYT---GDTIALSPPLII---EKAQIDELVDAL  437 (445)
T ss_pred             HHHHCCeEEeec---CCEEEEECCccC---CHHHHHHHHHHH
Confidence            999999999764   589999999999   589999999986

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=7.6e-33  Score=276.34  Aligned_cols=180  Identities=20%  Similarity=0.252  Sum_probs=159.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||+|||||||.+|+++++|++||   ++|+|+||+ |+|++++++++++.+..        ..|++||+
T Consensus       228 ~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~-pigav~~~~~i~~~~~~--------~~~~~T~~  298 (425)
T PRK07495        228 CDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPGP--------GGLGGTYG  298 (425)
T ss_pred             HHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCc-cceEEEEcHHHHhccCC--------CCcCCCCC
Confidence            3468999999999999999999999999999999   689999995 99999999999987753        46889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   .++++++|++|+++|+++.+++|.+.+|||.|+|++++|.++. ...| +.+....++.
T Consensus       299 ~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~-~~~~-~~~~~~~~~~  376 (425)
T PRK07495        299 GNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDAD-SGLP-SAEFANRVRL  376 (425)
T ss_pred             CCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCC-CCCc-cHHHHHHHHH
Confidence            99 999999999 88876   7899999999999999999999999999999999999997532 2222 2345678899


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.++|..+|+++|.|||++   |++|+|++++++
T Consensus       377 ~~~~~Gvl~~~~g~~~~~~r~~Ppl~i---t~~~id~~~~~l  415 (425)
T PRK07495        377 KALEKGLILLTCGVHGNVIRFLAPITI---QDDVFAEALDIL  415 (425)
T ss_pred             HHHHCCeEEeecCCCCCEEEEeCCCcc---CHHHHHHHHHHH
Confidence            999999999887766799999999999   589999999985

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=6.9e-33  Score=278.14  Aligned_cols=179  Identities=22%  Similarity=0.331  Sum_probs=157.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||++||+|||+|||||||.+|+++++||+||   ++|+++|| +|+|++++++++++.+..        ..|.+||+
T Consensus       237 c~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~--------~~~~~T~~  307 (445)
T PRK08593        237 CREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA--------PAHLFTTG  307 (445)
T ss_pred             HHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCC-cccEEEEEcHHHHhhhcc--------CCCCCCCC
Confidence            4468999999999999999999999999999999   68999999 599999999999988752        35788999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++.++||.+.+|||.|+|++++|..+.....+ +......+++
T Consensus       308 ~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~-~~~~~~~~~~  386 (445)
T PRK08593        308 ANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTR-DNEAALKICN  386 (445)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCC-cHHHHHHHHH
Confidence            99 999999999 88866   899999999999999999999999999999999999999754332222 2346678999


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.  .++++||.||+++   |++|||++++++
T Consensus       387 ~~~~~Gv~~~~~--~~~~lr~~p~l~~---t~~~id~~~~~l  423 (445)
T PRK08593        387 YCFEHGVVIIAV--AGNVLRFQPPLVI---TYEQLDTALNTI  423 (445)
T ss_pred             HHHHCCeEEecc--CCCEEEEECCCcc---CHHHHHHHHHHH
Confidence            999999999764  3689999999999   589999999986

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.97  E-value=1.1e-31  Score=265.41  Aligned_cols=168  Identities=20%  Similarity=0.189  Sum_probs=144.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...||++||+|||||||||||++|+++++||+||   ++|+|+|| +|+|+++++++++. +..        ..|++||+
T Consensus       209 ~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G-~p~~av~~~~~i~~-~~~--------~~~~~T~~  278 (395)
T PRK03715        209 TKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVAV-FEA--------GDQGGTYN  278 (395)
T ss_pred             HHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCC-cceEEEEEcccccc-ccC--------CCcCCCCC
Confidence            4468999999999999999999999999999999   68999999 59999999999962 321        46899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++..+++ +.+|||.|+|++|+|..+          ....+..
T Consensus       279 g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~----------~~~~~~~  347 (395)
T PRK03715        279 GNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKD----------IGPQIVE  347 (395)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCc----------hHHHHHH
Confidence            99 999999999 88876   89999999999999999988887 678999999999999642          1233555


Q ss_pred             HHHHC---CceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEH---GLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~---GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+++.   ||++.+.  .++++||.||+++   |++|||++++++
T Consensus       348 ~~~~~~~~Gi~~~~~--~~~~lR~~p~l~~---t~~ei~~~~~~l  387 (395)
T PRK03715        348 KARDMQPDGLLLNAP--RPNLLRFMPALNV---TTEEIDQMIAML  387 (395)
T ss_pred             HHHhccCCCEEEeec--CCCEEEEeCCccc---CHHHHHHHHHHH
Confidence            55555   9998765  3689999999999   589999999986

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.97  E-value=2.8e-31  Score=264.50  Aligned_cols=179  Identities=16%  Similarity=0.167  Sum_probs=157.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      -+||++||+|||+|||||||.+|+++++|+.||   ++|+|+||+ |+|++++++++++.+..        ..|++||++
T Consensus       229 ~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~-pigav~~~~~i~~~~~~--------~~~~~T~~g  299 (421)
T PRK09792        229 DEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM-PLSGVVGNANIMDAPAP--------GGLGGTYAG  299 (421)
T ss_pred             HHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCC-ceEEEEEcHHHHhccCC--------CCcCCCCCC
Confidence            468999999999999999999999999999999   689999995 99999999999987753        468999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|++++++ +++++   +++++++|++++++|+++.+++|.+.+|||.|+|++|+|.++. ...+ +......+++.
T Consensus       300 npl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~-~~~~-~~~~~~~l~~~  377 (421)
T PRK09792        300 NPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQ-TGEP-SAAIAQKIQQR  377 (421)
T ss_pred             CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCc-cCCc-chHHHHHHHHH
Confidence            9 999999999 88865   8899999999999999999999999999999999999997432 1122 12456789999


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+++..+++|||.|||++   +++||+++++++
T Consensus       378 ~~~~Gv~i~~~g~~~~~irl~P~l~i---~~~ei~~~~~~l  415 (421)
T PRK09792        378 ALAQGLLLLTCGAYGNVIRFLYPLTI---PDAQFDAAMKIL  415 (421)
T ss_pred             HHHCCcEEeecCCCCCEEEEeCCCcC---CHHHHHHHHHHH
Confidence            99999999876666799999999999   589999999875

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.97  E-value=5e-31  Score=264.42  Aligned_cols=176  Identities=23%  Similarity=0.335  Sum_probs=154.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||||.+|+++++|+.||   ++|+++|| +|+|++++++++++.+.         ..|++||+
T Consensus       251 ~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~~---------~~~~~T~~  320 (441)
T PRK05769        251 ADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLPP---------GSHANTFG  320 (441)
T ss_pred             HHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCC-cccEEEEEehhhhhcCC---------CCCCCCCC
Confidence            4468999999999999999999999999999999   68999999 59999999999985321         46999999


Q ss_pred             cc-HHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        81 gn-lA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      +| ++|++++++ +++++  +++++++|++|+++|+++.++||.+.+|||.|+|++|+|..++  ..+ +......+.+.
T Consensus       321 g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--~~~-~~~~~~~~~~~  397 (441)
T PRK05769        321 GNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEP-DPKLRDKVLYE  397 (441)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC--ccc-cHHHHHHHHHH
Confidence            99 999999999 88875  7899999999999999999999999999999999999997543  112 23466778999


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+.+  .++++|.||+++   |++|||++++++
T Consensus       398 ~~~~Gil~~~~~--~~~lr~~p~l~~---t~~~id~~~~~l  433 (441)
T PRK05769        398 AFKRGLLLLGAG--KSAIRIIPPLII---TEEEADIGLEIL  433 (441)
T ss_pred             HHhCCcEEecCC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            999999998754  589999999999   589999999986

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.97  E-value=1.1e-30  Score=260.24  Aligned_cols=180  Identities=17%  Similarity=0.218  Sum_probs=157.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||++||+|||+|||||||.+|+++++++.||   ++|+++|| +|+|++++++++++.+..        ..|++||+
T Consensus       228 c~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~--------~~~~~T~~  298 (421)
T PRK06777        228 CDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP--------GGLGGTYA  298 (421)
T ss_pred             HHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC--------CCCCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999999999987753        46889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++..++|.+.+|||.|+|++++|..+. ...+ +.++...+..
T Consensus       299 ~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~-~~~~~~~l~~  376 (421)
T PRK06777        299 GNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQ-TGKP-SPEFTRQYQR  376 (421)
T ss_pred             cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCc-cCCc-cHHHHHHHHH
Confidence            99 999999999 88765   8899999999999999999889999999999999999996432 1112 2356778889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++..++++||.|||++   +++++|+++++.
T Consensus       377 ~~~~~Gv~i~~~~~~g~~lr~~ppl~i---~~~~i~~~~~~l  415 (421)
T PRK06777        377 QALEEGLLLLSCGVHGNVIRFLYPLTI---PDAQFSKALNIL  415 (421)
T ss_pred             HHHhCCeEEeecCCCCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            999999999987656789999999999   589999999875

>KOG1403|consensus

Probab=99.97  E-value=6.5e-31  Score=247.55  Aligned_cols=179  Identities=25%  Similarity=0.325  Sum_probs=157.0

Q ss_pred             ccceEEehhHhhchhccch-hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhcc
Q psy7882           7 RDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDT   82 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn   82 (329)
                      +|-++|+||||+||||.|+ +|++|.|++.||   ++|.+|||+ |+++|+++++|.++|..  .+    ...-.||+||
T Consensus       242 aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGh-PVa~VattkeIA~Af~a--tg----v~YFNTyGGn  314 (452)
T KOG1403|consen  242 AGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGH-PVAAVATTKEIAQAFHA--TG----VEYFNTYGGN  314 (452)
T ss_pred             CCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCC-eeeEEeccHHHHHHhcc--cc----ceehhccCCC
Confidence            4779999999999999994 999999999999   679999997 99999999999999863  11    2345899999


Q ss_pred             -HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882          83 -VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC  157 (329)
Q Consensus        83 -lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l  157 (329)
                       ++||+++++ +++++   .+|+.++|++|...|+++..+|++|++|||.||++||++.+|..++.| +...+..++.+|
T Consensus       315 PVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP-~tk~A~~~v~rl  393 (452)
T KOG1403|consen  315 PVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTP-DTKEAHWVVNRL  393 (452)
T ss_pred             chhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCC-cHHHHHHHHHHH
Confidence             999999999 88876   889999999999999999999999999999999999999998877777 344566677788


Q ss_pred             HH-CCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         158 KE-HGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       158 ~e-~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      .+ +||++...|++.|+++|-||++.+   ++.+++++..
T Consensus       394 ke~y~VLlsaDGPh~NilKiKPPmCFn---eena~e~v~~  430 (452)
T KOG1403|consen  394 KELYRVLLSADGPHRNILKIKPPMCFN---EENADEFVLG  430 (452)
T ss_pred             HHhhhEEEecCCCCCceeecCCCcccC---hhhHHHHHHH
Confidence            76 689999999999999999999996   5666666654

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.97  E-value=6.9e-31  Score=261.07  Aligned_cols=172  Identities=17%  Similarity=0.245  Sum_probs=152.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcC-CccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKG-SFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgG-G~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      .-.||++||+|||||||||||++|++++++|.||   ++|+|+| | +|+|++++++++ +.+.        ...|++||
T Consensus       224 c~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~--------~~~~~~T~  293 (412)
T TIGR02407       224 CRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWK--------PGEHNGTF  293 (412)
T ss_pred             HHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCc-cceeEEEEchhh-hccC--------CCccCCCC
Confidence            4578999999999999999999999999999999   6899999 7 599999999986 5543        25689999


Q ss_pred             hcc-HHHHHHHHh-hH-HhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SV-LER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        80 agn-lA~aaala~-~i-le~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++| ++|++++++ ++ +++   .++++++|++|+++|+++.++++ .+.+|||.|+|++++|.+         ......
T Consensus       294 ~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~---------~~~~~~  364 (412)
T TIGR02407       294 RGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGD---------GDLAGK  364 (412)
T ss_pred             CccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecC---------hHHHHH
Confidence            999 999999998 74 655   78999999999999999999998 689999999999999953         134567


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++..|+++||++.+++..+++|||.||+++   |++|+|++++++
T Consensus       365 ~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~---t~~~i~~~~~~l  406 (412)
T TIGR02407       365 IAKAAFENGLIIETSGPNDEVIKLLPPLTI---DEETLQQGLDIL  406 (412)
T ss_pred             HHHHHHHCCCEEeccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            899999999999887766799999999999   589999999985

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.97  E-value=1.4e-30  Score=259.90  Aligned_cols=180  Identities=25%  Similarity=0.374  Sum_probs=157.5

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||++||+|||+|||||||.+|+++++||+||   ++|+|+|| +|+|++++++++++.+..        ..|++||
T Consensus       236 lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~~--------~~~~~T~  306 (433)
T PRK08117        236 ICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPL--------GSHGTTF  306 (433)
T ss_pred             HHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCC-CcceeEEEcHHHHhhccC--------CCCCCCC
Confidence            34578999999999999999999999999999999   68999999 599999999999987742        4689999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++..+|+.+.+|||.|+|++++|..+.  ..+ +......+.
T Consensus       307 ~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~--~~~-~~~~~~~~~  383 (433)
T PRK08117        307 GGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD--GEP-DGDAVEKIL  383 (433)
T ss_pred             CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC--CCc-chHHHHHHH
Confidence            999 999999999 88854   8999999999999999998889999999999999999997543  112 224566788


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.+.+..++++||.||+++   |++||+++++++
T Consensus       384 ~~l~~~Gv~~~~~g~~~~~lRl~p~~~~---t~~~i~~~~~~l  423 (433)
T PRK08117        384 DKCLEKGLLFYLCGNAGNVLRMIPPLTV---TKEEIDEGLDIL  423 (433)
T ss_pred             HHHHHCCCEEeecCCCCCEEEEeCCccC---CHHHHHHHHHHH
Confidence            9999999999876655789999999998   589999999986

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.97  E-value=5.7e-31  Score=258.34  Aligned_cols=155  Identities=15%  Similarity=0.181  Sum_probs=133.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...||++||+||||||| |||++|+++++||.||   ++|+|+|| +|+||++.+.++.            ...|++||+
T Consensus       192 c~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lggG-~P~~a~~~~~~~~------------~~~~~~T~~  257 (364)
T PRK04013        192 TEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVE------------RGKHGSTFG  257 (364)
T ss_pred             HHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccccCC-ceeEEEEeccccc------------CCCcCCCCC
Confidence            45689999999999999 9999999999999999   68999999 5999999988762            146999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   ++|++++       |+++.  ++.+.+|||+|+|+||||..+           ...+.+
T Consensus       258 gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~--~~~v~~vRG~Gl~~gve~~~~-----------~~~i~~  317 (364)
T PRK04013        258 GNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK--GERVVTTRGRGLMIGIVLKKP-----------VGKYVE  317 (364)
T ss_pred             cCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc--cCcceeeeeCcEEEEEEeCCc-----------HHHHHH
Confidence            99 999999999 98876   6777764       34442  378999999999999999631           245889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.++|  .|+++|.|||++   |++|+|++++++
T Consensus       318 ~~~~~Gll~~~~g--~~vlr~~Ppl~i---t~~~i~~~~~~l  354 (364)
T PRK04013        318 ELQNRGYLVHTAG--QRVIRLLPPLII---SKDTMEEAKSAI  354 (364)
T ss_pred             HHHhCCcEEeeCC--CCEEEEeCCccc---CHHHHHHHHHHH
Confidence            9999999998864  599999999999   489999999986

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.97  E-value=2.3e-30  Score=257.35  Aligned_cols=173  Identities=24%  Similarity=0.259  Sum_probs=154.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||+|||||||.+|+++++++.||   ++|+++|| +|+|++++++++++.+..        ..|++||+
T Consensus       217 ~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G-~piga~~~~~~~~~~~~~--------~~~~~t~~  287 (408)
T PRK04612        217 CDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQF--------GAHGTTFG  287 (408)
T ss_pred             HHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCC-CceEEEEECHHHHhhhcC--------CCcCCCCC
Confidence            4478999999999999999999999999999999   68999999 599999999999887752        46899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|++++++ +++++   +++++++|++|+++|+++.++|+.+.+|||.|+|++|+|..+.       .+....++.
T Consensus       288 ~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~-------~~~a~~i~~  360 (408)
T PRK04612        288 GNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH-------AGQAGAILD  360 (408)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch-------hhHHHHHHH
Confidence            99 999999999 88865   8999999999999999999999999999999999999997421       134567889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.|  .+++|+.|||++   +++|||++++++
T Consensus       361 ~l~~~Gvlv~~~g--~~~lRl~Ppl~i---t~eeid~~l~~l  397 (408)
T PRK04612        361 LAAEHGLLLLQAG--PDVLRFVPALNL---TDAELADGLARL  397 (408)
T ss_pred             HHHHCCeEEeeCC--CCEEEEcCCccC---CHHHHHHHHHHH
Confidence            9999999998764  599999999999   479999999985

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.97  E-value=4e-30  Score=255.83  Aligned_cols=179  Identities=18%  Similarity=0.180  Sum_probs=153.8

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||||||||||.+|+++++|+.||   ++|+|+||++|+|++++++++++.+..  ......+.|++||+
T Consensus       230 c~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~--~~~~~~~~~~~T~~  307 (423)
T PRK05964        230 CDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYS--DDRAKAFMHSPSYT  307 (423)
T ss_pred             HHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhc--CCcccccccCCCCC
Confidence            4578999999999999999999999999999999   589999998899999999999998752  11112356999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. ++|.+.++||.|+|++++|..+..      ......+.+
T Consensus       308 ~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~------~~~~~~l~~  380 (423)
T PRK05964        308 ANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL------ERDGPALRA  380 (423)
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc------hhHHHHHHH
Confidence            99 999999999 88865   8999999999999999985 588888999999999999964321      124567889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.   ++++||.|||++   |++|||++++++
T Consensus       381 ~l~~~Gv~v~~~---~~~lR~~p~l~~---t~edId~~v~~l  416 (423)
T PRK05964        381 FALERGVLLRPL---GNTIYLMPPYII---TAEELDRITDAI  416 (423)
T ss_pred             HHHHCCeEEEec---CCEEEEeCCccc---CHHHHHHHHHHH
Confidence            999999999874   479999999999   589999999986

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.97  E-value=7.9e-30  Score=255.99  Aligned_cols=179  Identities=25%  Similarity=0.331  Sum_probs=156.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||++||+|||+|||||||.+|+++++|+.||   ++|+++|| +|+|++++++++++.+..        ..|.+||+
T Consensus       234 ~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G-~pigav~~~~~i~~~~~~--------~~~~~T~~  304 (443)
T PRK08360        234 LDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLPP--------LAHAFTLS  304 (443)
T ss_pred             HHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCC-ceeEEEEEcHHHHhhhcC--------CCCCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999999999988753        46889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|++++++ +++++   +++++++|++|+++|+++..++|.+.+|||.|+|++|+|..++..+.+ +...+..+..
T Consensus       305 ~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~-~~~~~~~~~~  383 (443)
T PRK08360        305 GNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKER-AYEEAAKVVW  383 (443)
T ss_pred             cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCc-cHHHHHHHHH
Confidence            99 999999999 88765   899999999999999999989999999999999999999865433222 2344667889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++|+++.+.  .++++||.|||++   |++|||++++++
T Consensus       384 ~l~~~Gi~~~~~--~~~~lr~~P~l~~---t~~~id~~~~~l  420 (443)
T PRK08360        384 RAWELGLIVTFF--SGNVLRIQPPLTI---EKEVLDEGLDIL  420 (443)
T ss_pred             HHHHCCeEEeec--CCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            999999998764  3699999999999   589999999986

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.97  E-value=5.6e-30  Score=257.06  Aligned_cols=173  Identities=20%  Similarity=0.192  Sum_probs=145.8

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-+||+|||+|||||||||||++|+++++||+||   ++|++     |++++++++++++.+.. ...  ....|++||
T Consensus       254 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l-----~~~a~l~~~~i~~~~~~-~~~--~~~~~~~T~  325 (443)
T PRK08297        254 LCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKT-----QVCGIMAGRRVDEVEDN-VFA--VSSRINSTW  325 (443)
T ss_pred             HHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEecccc-----cccceecchHHHHhhhh-hcc--CccccCCCC
Confidence            34578999999999999999999999999999999   67985     67777777777654321 000  123599999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++.+++|.+. +|||.|+|++++|.+         ......+
T Consensus       326 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~---------~~~~~~~  396 (443)
T PRK08297        326 GGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT---------TADRDEV  396 (443)
T ss_pred             CccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC---------HHHHHHH
Confidence            999 999999999 88866   89999999999999999999999765 999999999999953         1345678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++.|+++||++.+++  .++++|.|||++   |++|||++++++
T Consensus       397 ~~~l~~~Gvl~~~~~--~~~lr~~P~l~~---t~~eid~~l~~l  435 (443)
T PRK08297        397 IRRLWEEGVLVLPCG--ERSIRFRPALTV---TTEEIDAAIDAL  435 (443)
T ss_pred             HHHHHHCCEEEecCC--CCeEEEECCccC---CHHHHHHHHHHH
Confidence            999999999998864  479999999999   589999999985

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.97  E-value=6e-30  Score=255.62  Aligned_cols=175  Identities=16%  Similarity=0.140  Sum_probs=152.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||+|||||||++|+++++||.||   ++|+|+||++|++++++++++++.+..   .....+.|++||+
T Consensus       238 c~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~---~~~~~~~~~~T~~  314 (427)
T TIGR00508       238 CKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISS---GEAGCFMHGPTFM  314 (427)
T ss_pred             HHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhc---CCCCccccCCCCC
Confidence            4578999999999999999999999999999999   689999998899999999999998863   1111256999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. .++.+.+|||.|+|++|+|..+.         ....+..
T Consensus       315 g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~-~~~~i~~vrg~G~~~~i~~~~~~---------~~~~~~~  384 (427)
T TIGR00508       315 GNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR-KNPVVKDVRVLGAIGVVEMYKPV---------NVEELQK  384 (427)
T ss_pred             cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCEEeEeccccEEEEEECCcc---------CHHHHHH
Confidence            99 999999999 88865   8999999999999999985 47778899999999999996321         1356889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.   ++++++.||+++   |++|||++++++
T Consensus       385 ~l~~~Gv~~~~~---~~~l~~~ppl~~---t~~~id~~~~~l  420 (427)
T TIGR00508       385 KFVEQGVWIRPF---GKLIYVMPPYII---TTEQLQKLTAAL  420 (427)
T ss_pred             HHHHCCeEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            999999999875   479999999998   589999999985

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.97  E-value=3.8e-30  Score=259.59  Aligned_cols=167  Identities=17%  Similarity=0.266  Sum_probs=141.6

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCc--ch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC--RF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~--PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      +.-+||+|||+|||||||||||.+|+++++||+  ||   ++|+|+ ||+ +++    + +.++..        ..+.|+
T Consensus       280 lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-~~~----~-~~~~~~--------~~~~~~  345 (464)
T TIGR00699       280 ITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-FFH----D-PAFRPN--------KPYRQF  345 (464)
T ss_pred             HHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-ccc----c-hhccCC--------CCcccc
Confidence            345789999999999999999999999999997  99   689995 675 332    2 222111        135799


Q ss_pred             hhhhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEE--eeceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVR--GKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VR--G~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +||++| ++|++++++ +++++   +++++++|++|+++|+++.++|| .|.+||  |.|+|++|+|..         ..
T Consensus       346 ~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~---------~~  416 (464)
T TIGR00699       346 NTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD---------EA  416 (464)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC---------HH
Confidence            999999 999999999 88876   89999999999999999998999 799999  999999999842         23


Q ss_pred             HHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|+++||++.++|  .++|||.|||++   |++|||++++++
T Consensus       417 ~~~~i~~~~~~~Gvl~~~~g--~~~ir~~Ppl~i---t~~eid~~~~~l  460 (464)
T TIGR00699       417 KRDKLLKKARNNGVNIGGCG--VKAIRLRPMLVF---QKHHADIFLEII  460 (464)
T ss_pred             HHHHHHHHHHHCCcEEecCC--CCeEEEeCCCCC---CHHHHHHHHHHH
Confidence            46779999999999998764  489999999999   589999999985

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.96  E-value=1.6e-29  Score=251.56  Aligned_cols=180  Identities=19%  Similarity=0.208  Sum_probs=157.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||++||+|||+|||||+|.+|+++++|+.||   ++|+++|| +|+|++++++++++.+..        ..|++||+
T Consensus       227 c~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~~--------~~~~~T~~  297 (420)
T TIGR00700       227 CREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP--------GGLGGTYA  297 (420)
T ss_pred             HHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCC-cceEEEEecHHHHhhcCC--------CCcCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999999999987753        46899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   .++++++|++|+++|+++.+++|.+.+|||.|+|++++|.++ ....| +......+.+
T Consensus       298 ~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~-~~~~~-~~~~~~~l~~  375 (420)
T TIGR00700       298 GNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDP-GTTEP-DAGLAERIAT  375 (420)
T ss_pred             cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecC-CCCCc-cHHHHHHHHH
Confidence            99 999999999 88765   889999999999999999999999999999999999999642 11122 2356778899


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++..++++||.||+++   ++++|+++++++
T Consensus       376 ~~~~~Gv~i~p~~~f~~~lRl~p~l~~---~~~~l~~~~~~l  414 (420)
T TIGR00700       376 AAHAAGLLLLTCGMFGNIIRFLPPLTI---GDELLSEGLDIL  414 (420)
T ss_pred             HHHHCCeEEeccCCCCCEEEEECCCCc---CHHHHHHHHHHH
Confidence            999999999987655799999999988   479999999875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.96  E-value=8.7e-30  Score=254.31  Aligned_cols=179  Identities=13%  Similarity=0.013  Sum_probs=148.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.+|+|||+||||||| |||.+|+++++||+||   ++|+|+|| +|+||+++++++++.+..  .   ....|++||+
T Consensus       230 c~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~--~---~~~~~~~T~~  302 (428)
T PRK12389        230 AHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAP--L---GPAYQAGTMA  302 (428)
T ss_pred             HHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhcc--C---CCcccccCCc
Confidence            34689999999999999 9998899999999999   68999999 599999999999998752  1   1257999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCC----CCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETK----VPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~----~p~~~~~~  150 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|++++++||.+.++ ||.| |++++|..++...    .+-+....
T Consensus       303 gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~  381 (428)
T PRK12389        303 GNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAF  381 (428)
T ss_pred             cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHH
Confidence            99 999999999 88865   8999999999999999999999988887 7777 8899997543210    00122456


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++..|+++||++.+.+  .++  +.||+++   |++|||++++++
T Consensus       382 ~~~~~~l~~~Gv~~~~~~--~~~--~~~~l~~---t~e~id~~~~~l  421 (428)
T PRK12389        382 GKFFKLMLNQGINLAPSK--YEA--WFLTTAH---TEEDIEETLEAV  421 (428)
T ss_pred             HHHHHHHHHCCcEeecCC--CCC--eeecCCC---CHHHHHHHHHHH
Confidence            788999999999998764  233  3589988   589999999985

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.96  E-value=1.7e-29  Score=249.23  Aligned_cols=173  Identities=16%  Similarity=0.209  Sum_probs=152.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...||++||+|||+|||||||.+|+++++||+||   ++|+++|| +|+|++++++++++.+..        ..|++||+
T Consensus       209 c~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG-~pigav~~~~~i~~~~~~--------~~~~~t~~  279 (397)
T TIGR03246       209 CDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGG-FPIGAMLTTTEIAAHLKV--------GTHGTTYG  279 (397)
T ss_pred             HHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCC-cceeEEEEcHHHHHhccC--------CCcCCCCC
Confidence            4578999999999999999999999999999999   68999999 599999999999988752        46889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   ++++++++++|+++|+++..+++.+.+|||.|+|++++|.++.       ......++.
T Consensus       280 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~~~  352 (397)
T TIGR03246       280 GNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY-------QGKAKQFVN  352 (397)
T ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch-------hhHHHHHHH
Confidence            99 999999998 77754   7999999999999999998889989999999999999996421       134567889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++|+++.+.|  .+++|+.||+++   |++|||++++++
T Consensus       353 ~l~~~Gv~~~~~g--~~~lR~~p~~~~---t~~~i~~~~~~l  389 (397)
T TIGR03246       353 AAAEEGVIALIAG--PNVVRFAPSLVI---SDDDIDEGLARF  389 (397)
T ss_pred             HHHHCCeEEeecC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            9999999998764  489999999998   589999999985

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.96  E-value=3.5e-29  Score=251.37  Aligned_cols=182  Identities=20%  Similarity=0.285  Sum_probs=158.2

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-+||++||+|||+|||||+|.+|+++++++.||   ++|+++|| +|+|++++++++++.+..        ..|++||
T Consensus       248 l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~--------~~~~~T~  318 (451)
T PRK06918        248 ICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAP--------GELGGTY  318 (451)
T ss_pred             HHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCC-CccEEEEEcHHHHhccCC--------CCcCcCC
Confidence            34568999999999999999999999999999999   68999999 599999999999987753        4689999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   .++++++|++|+++|+++.++|+.+.+|||.|+|+++++..++..+.| +......+.
T Consensus       319 ~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~-~~~~~~~l~  397 (451)
T PRK06918        319 AGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEP-DKTLTANIC  397 (451)
T ss_pred             CcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCC-cHHHHHHHH
Confidence            999 999999999 88865   789999999999999999888998999999999999999744322222 234677889


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.+++..++++||.||+++   ++++||++++++
T Consensus       398 ~~~~~~Gvlv~~~~~~~~~lrl~p~l~~---t~~~id~~l~~l  437 (451)
T PRK06918        398 KEANKRGLLLLSAGTYGNVIRVLMPLVI---TDEQLEEGLTII  437 (451)
T ss_pred             HHHHHCCeEEeecCCCCCEEEEECCCcc---CHHHHHHHHHHH
Confidence            9999999999986555699999999988   589999999985

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.96  E-value=4.3e-29  Score=249.01  Aligned_cols=172  Identities=17%  Similarity=0.234  Sum_probs=149.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcC-CccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKG-SFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgG-G~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      .-+||++||+|||||||||||.+|+++++|+.||   ++|+|+| | +|+|++++++++. .+.        ...|++||
T Consensus       228 c~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G-~pigav~~~~~i~-~~~--------~~~~~~T~  297 (425)
T PRK09264        228 CRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYG-LPMALVLIKPELD-VWK--------PGEHNGTF  297 (425)
T ss_pred             HHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCCc-cceEEEEEchhhh-ccC--------CCccCCCC
Confidence            4568999999999999999999999999999999   6899999 7 6999999999874 443        24689999


Q ss_pred             hcc-HHHHHHHHh--hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          80 SDT-VRPHVQIKK--SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        80 agn-lA~aaala~--~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++| ++|++++++  +++++   +++++++|++|+++|+++.+++|. +.+|||.|+|++++|.+         ......
T Consensus       298 ~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~---------~~~~~~  368 (425)
T PRK09264        298 RGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD---------GELAGK  368 (425)
T ss_pred             CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC---------hHHHHH
Confidence            999 999998887  45544   789999999999999999888985 58999999999999953         234667


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|+++||++.+++..+++|+|.|||++   |++||+++++++
T Consensus       369 l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~---t~~ei~~~~~~l  410 (425)
T PRK09264        369 IAAEAFENGLIIETSGPEDEVVKLLPPLTI---DEEELEEGLDIL  410 (425)
T ss_pred             HHHHHHHCCCEEeccCCCCCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            899999999999887666789999999999   489999999985

>PLN00144 acetylornithine transaminase

Probab=99.96  E-value=9.6e-29  Score=243.39  Aligned_cols=170  Identities=16%  Similarity=0.239  Sum_probs=151.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||+|||||+|.+|+++++++.||   ++|+|+|| +|+|++++++++++.+..        ..|++||+
T Consensus       197 ~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~~--------~~~~~T~~  267 (382)
T PLN00144        197 CDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINP--------GDHGSTFA  267 (382)
T ss_pred             HHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhccCC--------CCCCCCCC
Confidence            4468999999999999999999999999999999   68999999 599999999999988753        46899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   .++++++|++|++.|+++..+||.+.+|||.|+|++++|.. .          ...+..
T Consensus       268 ~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~-~----------~~~~~~  336 (382)
T PLN00144        268 GGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDV-P----------AGPLVD  336 (382)
T ss_pred             CCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecC-c----------cHHHHH
Confidence            99 999999999 88876   78999999999999999988999899999999999999931 1          245888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++. +++|||.||++++   ++||+++++++
T Consensus       337 ~~~~~Gv~i~~~~~-~~~lrl~p~~~~~---~~~i~~~~~~l  374 (382)
T PLN00144        337 ACRDSGLLVLTAGK-GDVVRLVPPLVIS---EAELEQAVEIL  374 (382)
T ss_pred             HHHHCCeEEeecCC-CCEEEEeCCCccC---HHHHHHHHHHH
Confidence            99999999988653 5999999999884   79999999985

>KOG1401|consensus

Probab=99.96  E-value=8.3e-29  Score=240.87  Aligned_cols=176  Identities=17%  Similarity=0.072  Sum_probs=141.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...+|++||+|||||||||+|..||++++|++||   ++|.|+|| +|+||++++++||+.+.+   +  .+..||+||+
T Consensus       236 C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~---~--~~l~hg~Tf~  309 (433)
T KOG1401|consen  236 CDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISP---G--DHLYHGGTFS  309 (433)
T ss_pred             HhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCC-ceeEEEeehHHHHhhcCC---C--CccccCcccC
Confidence            3468999999999999999999999999999999   68999999 699999999999999875   1  1378999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      || ++|.++..+ +.+.+   ++++..+|+.|++.|.+...+++.... .+|+|+++|++|..+..           .+.
T Consensus       310 gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~-----------~~~  378 (433)
T KOG1401|consen  310 GNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVY-----------KFA  378 (433)
T ss_pred             CChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechh-----------hhh
Confidence            99 999999998 76655   899999999999999999988886444 49999999999975321           133


Q ss_pred             HHHHHCCceeeccCC--CCCEEEEeC--ccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL--SGNTLTALQ--PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~--~~nvIrl~P--PL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|++....+.  ..+.+++.|  ++++ +|++|++...+++.
T Consensus       379 d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~-~~~~E~i~~~l~i~  424 (433)
T KOG1401|consen  379 DAAREQGLLILTLGKGLLEEGVRIAPIYLLTV-EHTPEVIQRLLTIL  424 (433)
T ss_pred             hhhhhhhHHHHHHhcccccceEEEeccccccc-cCcHHHHHHHHHHH
Confidence            333444444433221  135688888  5555 45789999999874

>PRK07046 aminotransferase; Validated

Probab=99.96  E-value=3.3e-28  Score=244.97  Aligned_cols=183  Identities=11%  Similarity=-0.024  Sum_probs=148.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhh-ccCCCCccchhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKY-QILKTPAHKLKI   79 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~-~~~~~~~hg~T~   79 (329)
                      .-+||+|||+||||| | |+|..++++++||+||   ++|+|+|| +|+||+++++++|+.+.+... .....+.|++||
T Consensus       248 c~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~  324 (453)
T PRK07046        248 TRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTL  324 (453)
T ss_pred             HHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCC
Confidence            446899999999999 5 5666667888999999   68999999 599999999999998853100 001124689999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRH  149 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~  149 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++..+++.+.+|||.|+|++++|..++...     .+.+...
T Consensus       325 ~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~  404 (453)
T PRK07046        325 SANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPEL  404 (453)
T ss_pred             cccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHH
Confidence            999 999999999 88865   8999999999999999999999999999999999999996432210     1112345


Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...++..|+++||++.+.   ++.+++.||     ||++|||++++++
T Consensus       405 ~~~~~~~~~~~Gv~~~~~---~~~~~~~p~-----~t~~did~~~~~~  444 (453)
T PRK07046        405 EAALHLYLLNRGVLITPF---HNMMLVCPA-----TTAADVDRLVAAF  444 (453)
T ss_pred             HHHHHHHHHHCCCEEecc---cCcEEEeCC-----CCHHHHHHHHHHH
Confidence            677889999999999873   467788886     4789999999986

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.96  E-value=1.9e-28  Score=244.94  Aligned_cols=173  Identities=20%  Similarity=0.211  Sum_probs=145.0

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-+||+|||+|||||||||||.+|+++++||+||   ++|++     |+++++.++++++.... ...  ....|++||
T Consensus       247 lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~-~~~--~~~~~~~T~  318 (431)
T TIGR03251       247 LCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADN-VFA--VPSRLNSTW  318 (431)
T ss_pred             HHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhh-ccc--CccccCCCC
Confidence            34578999999999999999999999999999999   56874     77777777776543321 000  123589999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|++++++++ .+.+|||.|+|++++|..         ......+
T Consensus       319 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~---------~~~~~~~  389 (431)
T TIGR03251       319 GGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS---------TADRDEV  389 (431)
T ss_pred             CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC---------HHHHHHH
Confidence            999 999999999 88866   68999999999999999988999 899999999999999952         1345678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++.+.+  .+++||.|||++   |++|||++++++
T Consensus       390 ~~~l~~~Gvl~~~~g--~~~lr~~P~l~~---t~~eid~~l~~l  428 (431)
T TIGR03251       390 IRQLYREGVLLLGCG--ERSIRFRPPLTV---TREEIDAAIDAI  428 (431)
T ss_pred             HHHHHhCCeEEecCC--CCeEEEECCccC---CHHHHHHHHHHH
Confidence            899999999998754  489999999998   589999999985

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.96  E-value=5.3e-29  Score=241.75  Aligned_cols=123  Identities=23%  Similarity=0.344  Sum_probs=113.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      -+||+|||+|||||||||||++|+++++||+||   ++|+|+|| +|+||+++++++++.+.+        ..|++||++
T Consensus       208 ~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG-~p~sav~~~~~i~~~~~~--------~~~~~T~~g  278 (339)
T PF00202_consen  208 REHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGG-LPISAVLGSEEIMEAFQP--------GSHGSTFGG  278 (339)
T ss_dssp             HHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT--------TSSTCTTTT
T ss_pred             cccccceecccccccccccCCccceecccccCcccccccchhhh-hhcccccccchhhccccc--------ccccccccc
Confidence            468999999999999999999999999999999   68999999 799999999999987753        459999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV  136 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~  136 (329)
                      | ++|++++++ +++++   +++++++|++|+++|++|+++|+.+.+|||.|+|++|+|.
T Consensus       279 ~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~  338 (339)
T PF00202_consen  279 NPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRGIGLMIGIELV  338 (339)
T ss_dssp             -HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred             chHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence            9 999999999 88877   8999999999999999999999999999999999999996

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.95  E-value=2.8e-28  Score=240.83  Aligned_cols=180  Identities=12%  Similarity=0.030  Sum_probs=153.6

Q ss_pred             CccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           2 DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         2 ~~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+|..+|+|||||||+||| |.+..+||++|||+||   ++|.||||+ |+||+.++++||+.+.+  .+   +..+++|
T Consensus       228 ~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGl-P~ga~gGr~eiM~~~~p--~g---~vyqaGT  300 (432)
T COG0001         228 ELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAP--LG---PVYQAGT  300 (432)
T ss_pred             HHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCc-ceeeeccHHHHHhhhCC--CC---CccccCC
Confidence            4688999999999999999 7777889999999999   689999996 99999999999998875  22   4688999


Q ss_pred             hhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC------C
Q psy7882          79 ISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL------N  146 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~------~  146 (329)
                      |+|| ++|+|++++ +.+.+    ++++.++|++|+++|+++.++|+....|.+.|.|++|.|++.+..  .|      +
T Consensus       301 ~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~--n~~da~~sd  378 (432)
T COG0001         301 LSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVR--NYADAKRSD  378 (432)
T ss_pred             CCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCC--CHHHHHhhc
Confidence            9999 999999999 66653    899999999999999999999999999999999999999864321  12      1


Q ss_pred             hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...++.+.|+++||++.|+.       +.-.++++.|+++|||.++++.
T Consensus       379 ~~~~~~~~~~~l~~GV~l~ps~-------~ea~flS~ahte~di~~~~~a~  422 (432)
T COG0001         379 VERFAKFFHHLLNRGVYLAPSQ-------FEAGFLSTAHTEEDIDRTLEAA  422 (432)
T ss_pred             hHHHHHHHHHHHhCCcccCCcc-------ccceeeecccCHHHHHHHHHHH
Confidence            2345667779999999998863       2234788899999999999986

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.95  E-value=1.1e-27  Score=237.08  Aligned_cols=174  Identities=14%  Similarity=0.193  Sum_probs=152.0

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||++||+|||+|||||+|.+|+++++++.||   ++|+|+|| +|+|++++++++++.+..        ..|++||
T Consensus       212 l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG-~~ig~~~~~~~~~~~~~~--------~~~~~t~  282 (406)
T PRK12381        212 LCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGG-FPIGAMLTTEKCASVMTV--------GTHGTTY  282 (406)
T ss_pred             HHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCC-CceEEEEEcHHHHhhcCC--------CCCCCCC
Confidence            34578999999999999999999999999999999   68999999 599999999999987753        5688999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +++ ++|++++++ +++++   .+++++++++|.++|+++..+++.+.++||.|+|+++++.++.       ......+.
T Consensus       283 ~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~-------~~~~~~~~  355 (406)
T PRK12381        283 GGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY-------AGKAKQIS  355 (406)
T ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch-------hhHHHHHH
Confidence            999 999999998 77765   7899999999999999998788888999999999999996421       12456788


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.+.+  .+++||.||+++   |++|||++++++
T Consensus       356 ~~l~~~Gv~v~~~g--~~~lRl~p~~~~---t~~~i~~~~~~l  393 (406)
T PRK12381        356 QEAAKAGVMVLIAG--PNVVRFAPALNI---SEEEITTGLDRF  393 (406)
T ss_pred             HHHHHCCcEEeeCC--CCEEEEeCCccC---CHHHHHHHHHHH
Confidence            99999999998754  579999999998   479999999985

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.95  E-value=1.2e-27  Score=239.70  Aligned_cols=185  Identities=9%  Similarity=0.015  Sum_probs=149.9

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+|||+|||+||| |||.+|+++++||+||   ++|+|+|| +|+|++++++++++.+..  .   ....|++||+
T Consensus       231 c~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~--~---~~~~~~~T~~  303 (433)
T PRK00615        231 CRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAP--E---GTIFQAGTLS  303 (433)
T ss_pred             HHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcC--C---CCcccCCCCc
Confidence            34689999999999999 9999999999999999   68999999 599999999999998752  1   1256899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCC--CCCC--ChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKET--KVPL--NSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~--~~p~--~~~~~  150 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++..+++. +..+| .|+|++|+|..++.+  +.+.  +.+..
T Consensus       304 g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~  382 (433)
T PRK00615        304 GNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAF  382 (433)
T ss_pred             ccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHH
Confidence            99 999999999 98865   899999999999999999877543 77888 999999999854321  0010  23456


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhh
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQS  204 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~  204 (329)
                      ..+...|+++||++.+..+ +.      .++...||++|||++++++. ..+.+
T Consensus       383 ~~~~~~l~~~Gv~~~~~~~-~~------~~ls~~ht~~did~~~~a~~-~~~~~  428 (433)
T PRK00615        383 QTFYQSAFSKGVYLSPSPF-EA------SFLSSAHSMENLDYAQNVLI-DSLEK  428 (433)
T ss_pred             HHHHHHHHHCCeeecCccc-cc------cceecCCCHHHHHHHHHHHH-HHHHH
Confidence            7899999999999987431 11      25677899999999999863 34443

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.95  E-value=1.5e-27  Score=241.56  Aligned_cols=177  Identities=12%  Similarity=0.022  Sum_probs=143.9

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ++-.||+|||+|||+||| |+|.+|+++++||+||   ++|+|+|| +|+||+++++++|+.+..  .   ..+.|++||
T Consensus       275 lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~--~---~~~~~~~T~  347 (474)
T PLN02482        275 ITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAP--A---GPMYQAGTL  347 (474)
T ss_pred             HHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhcc--C---CCcccccCc
Confidence            345789999999999999 9999999999999999   68999999 599999999999998752  1   135799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc--e-eeEEeeceeeEEEeecCCCC-----CCCCC
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI--V-GDVRGKGLMIGVDLVQDKET-----KVPLN  146 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~--v-~~VRG~GLm~gIef~~d~~~-----~~p~~  146 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++..+++.  + .++||   |++++|..++..     ..+ +
T Consensus       348 ~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g---~~gi~f~~~~~~~~~~~~~~-d  423 (474)
T PLN02482        348 SGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG---MFGFFFTEGPVYNFADAKKS-D  423 (474)
T ss_pred             chhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce---EEEEEEecCCccChhhhccC-C
Confidence            999 999999999 88865   899999999999999999888653  2 34444   999999764321     011 2


Q ss_pred             hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ......+.+.|+++||++.+.+. +.  . .||+++   |++|||++++++
T Consensus       424 ~~~~~~~~~~l~~~Gv~~~~~~~-~~--~-~psl~h---t~~dId~~l~al  467 (474)
T PLN02482        424 TAKFARFHRGMLEEGVYLAPSQF-EA--G-FTSLAH---TEEDIDFTIAAA  467 (474)
T ss_pred             HHHHHHHHHHHHHCCeEEeccCC-CC--C-cCCCCC---CHHHHHHHHHHH
Confidence            34567789999999999987542 11  1 388887   689999999986

>PLN02624 ornithine-delta-aminotransferase

Probab=99.95  E-value=6.3e-27  Score=236.77  Aligned_cols=177  Identities=16%  Similarity=0.195  Sum_probs=153.2

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||++||+|||||||||||.+|+++++++.||   ++|+++||++|+|++++++++++.+.+        ..|++||
T Consensus       253 lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~--------~~~~~T~  324 (474)
T PLN02624        253 LCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKP--------GEHGSTF  324 (474)
T ss_pred             HHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhcc--------CCcCCCC
Confidence            34578999999999999999999999999999999   689999998899999999999887653        5689999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      +++ ++|++++++ +++++   .+++.+++++|+++|+++..+++ .+.+|||.|+|++|+|..+..     +......+
T Consensus       325 ~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~-----~~~~a~~~  399 (474)
T PLN02624        325 GGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKL-----GPVSAYDV  399 (474)
T ss_pred             CCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCc-----ChHHHHHH
Confidence            999 999999998 87765   67899999999999999988898 478899999999999953210     12345678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++.+.+  +++|||.||+++   |++||+++++++
T Consensus       400 ~~~L~e~GV~v~p~~--~~~lR~~p~l~~---t~e~id~~l~~L  438 (474)
T PLN02624        400 CLKLKERGLLAKPTH--DTIIRLAPPLSI---SEDELQECSKAL  438 (474)
T ss_pred             HHHHHhCCeEEecCC--CCEEEEECCccC---CHHHHHHHHHHH
Confidence            888999999998864  689999999998   589999999975

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.94  E-value=5e-26  Score=223.35  Aligned_cols=167  Identities=16%  Similarity=0.215  Sum_probs=146.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      -.||++||+|||+|||||+|.+|+++++++.||   ++|+++|| +|+|++++++++++.+..        ..|++||++
T Consensus       214 ~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~--------~~~~~t~~~  284 (398)
T PRK03244        214 DRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADLLTP--------GLHGSTFGG  284 (398)
T ss_pred             HHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCC-cccEEEEEcHHHHhhccC--------CCCcCCCCC
Confidence            467999999999999999999999999999999   68999999 599999999999887752        468899999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|+++++. +++++   .+++++++++|+++|+++  .+|.+.++||.|+|++++|..+          ....+.+.
T Consensus       285 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~v~g~g~~~~i~~~~~----------~~~~~~~~  352 (398)
T PRK03244        285 NPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL--GHPLVDHVRGRGLLLGIVLTAP----------VAKAVEAA  352 (398)
T ss_pred             CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--CCCceeeEeeccEEEEEEEecc----------HHHHHHHH
Confidence            9 999999998 87754   789999999999999987  4788889999999999999531          24568899


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+.+  .++||+.||+++   +++||+++++++
T Consensus       353 l~~~Gv~~~~~~--~~~iR~~p~~~~---t~~~i~~~~~~l  388 (398)
T PRK03244        353 AREAGFLVNAVA--PDVIRLAPPLII---TDAQVDAFVAAL  388 (398)
T ss_pred             HHHCCeEEeecC--CCEEEEECCCcC---CHHHHHHHHHHH
Confidence            999999998753  589999999988   489999999986

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.93  E-value=1.9e-25  Score=218.90  Aligned_cols=169  Identities=19%  Similarity=0.274  Sum_probs=148.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++|+.||   ++|++++| +|+|++++++++++.+..        ..|++||+
T Consensus       205 ~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~--------~~~~~t~~  275 (389)
T PRK01278        205 CDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGG-FPLGACLATEEAAKGMTP--------GTHGSTYG  275 (389)
T ss_pred             HHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCC-cceEEEEEcHHHHhccCC--------CCCCCCCC
Confidence            4578999999999999999999999999999999   68999999 599999999999887753        56889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +| ++|++++++ +++++   .+++++++++++++|+++.++++ .+.++||.|+|+++++..+           ...+.
T Consensus       276 ~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~-----------~~~~~  344 (389)
T PRK01278        276 GNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP-----------NRDLV  344 (389)
T ss_pred             ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC-----------HHHHH
Confidence            99 999999888 77754   68899999999999999988888 7889999999999998531           34688


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.|.+  .+.+||.||+++   +++||+++++++
T Consensus       345 ~~l~~~GV~~~p~~--~~~lR~~p~~~~---~~~~i~~~l~~l  382 (389)
T PRK01278        345 QALRDEGLLTVGAG--DNVVRLLPPLII---TEEEIDEALERL  382 (389)
T ss_pred             HHHHHCCeEEeecC--CCEEEEeCCccc---CHHHHHHHHHHH
Confidence            89999999998864  589999999988   479999999975

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.93  E-value=1.7e-25  Score=223.79  Aligned_cols=176  Identities=10%  Similarity=-0.014  Sum_probs=141.8

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHh--hhhhhhccCCCCccchh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFEN--FIKIKYQILKTPAHKLK   78 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~--~~~~~~~~~~~~~hg~T   78 (329)
                      .-+||++||+|||+|||++++ +++++++||.||   ++|+|||| +|+|++++++++++.  +..  ......+.|++|
T Consensus       213 c~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~PDi~t~gK~lggG-~p~~av~~~~~i~~~~~~~~--~~~~~~~~~~~T  288 (431)
T PRK06209        213 CHENGALFILDEMITGFRWHM-RGAQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYMELGGLEH--TDRERVFLLSTT  288 (431)
T ss_pred             HHHcCCEEEEEcccccCCcCc-chhhHHhCCCcceeeehhhhcCC-cccEEEEEHHHHHhhhcccc--cCCCCceeeccC
Confidence            446899999999999998864 455667999999   68999999 599999999999987  311  111123569999


Q ss_pred             hhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          79 ISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      |++| ++|++++++ +++++   +++++++|++|+++|+++..+++.+.+|||.|+++++++..+...+.+ .......+
T Consensus       289 ~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~-~~~~~~~~  367 (431)
T PRK06209        289 HGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQP-SQAFRTLF  367 (431)
T ss_pred             CCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCC-cHHHHHHH
Confidence            9999 999999999 88876   899999999999999999989999999999999999999643211122 12345578


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCcccc-CcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLL-NYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~I-t~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++             ||+++ ..||++|||++++++
T Consensus       368 ~~~l~~~Gi~~-------------p~l~is~~ht~~dId~~l~~l  399 (431)
T PRK06209        368 LQETIRRGVLM-------------PSLVVSYAHGDADIERTIDAV  399 (431)
T ss_pred             HHHHHHCCccc-------------ccccccccCCHHHHHHHHHHH
Confidence            88999999974             45533 578899999999986

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.93  E-value=6.3e-25  Score=219.04  Aligned_cols=179  Identities=12%  Similarity=0.036  Sum_probs=149.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-.||++||+|||+||| |+|.+|+++++|+.||   ++|+++|| +|+|++++++++++.+..  .   ....|++||+
T Consensus       227 ~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~--~---~~~~~~~T~~  299 (426)
T PRK00062        227 CDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAP--L---GPVYQAGTLS  299 (426)
T ss_pred             HHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhcc--C---CCceecccCc
Confidence            34689999999999999 9999999999999999   68999999 599999999999998852  1   1246889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~  150 (329)
                      ++ ++|++++++ +++++   ++++++++++++++|+++..+++.+.++||.|+|++++|..++..     +.+ +...+
T Consensus       300 ~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~-~~~~~  378 (426)
T PRK00062        300 GNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKS-DTERF  378 (426)
T ss_pred             CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccc-cHHHH
Confidence            99 999999999 88765   899999999999999999999999999999999999999754221     111 22456


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++..|+++||++.+.+  .+++++  ++++   |++|||++++++
T Consensus       379 ~~i~~~l~~~Gv~v~~~~--~~~~~~--~~~~---t~~ei~~~~~~l  418 (426)
T PRK00062        379 ARFFHAMLDEGVYLAPSQ--FEAGFV--SAAH---TDEDIEKTLEAA  418 (426)
T ss_pred             HHHHHHHHHCCeEeecCC--cCceee--eccC---CHHHHHHHHHHH
Confidence            779999999999998864  355554  4666   689999999985

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.92  E-value=6.1e-25  Score=216.31  Aligned_cols=167  Identities=19%  Similarity=0.266  Sum_probs=145.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..||++||+|||+|||||+|.+|+++++++.||   ++|++++|++|+|++++++++++.+..        ..|++||++
T Consensus       217 ~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~--------~~~~~t~~~  288 (396)
T PRK04073        217 KEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP--------GSHGSTFGG  288 (396)
T ss_pred             HHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC--------CCCCCCCCC
Confidence            457999999999999999999999999999999   689999998899999999999987752        468899999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|++++++ +++++   .+++++++++|.++|+++  .++.+..+||.|+|+++++..+           ...+.+.
T Consensus       289 ~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l--~~~~i~~~~~~g~~~~~~~~~~-----------~~~~~~~  355 (396)
T PRK04073        289 NPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI--DNPMIKEVRGRGLFIGVELNEP-----------ARPYCEA  355 (396)
T ss_pred             CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh--cCCcccceecceEEEEEEecch-----------HHHHHHH
Confidence            9 999999998 87754   689999999999999987  3567889999999999998521           3457888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+.+  +++|||.||+++   |++|||++++++
T Consensus       356 l~~~Gv~~~~~~--~~~iRi~p~l~~---t~e~i~~~~~~l  391 (396)
T PRK04073        356 LKEEGLLCKETH--ETVIRFAPPLVI---TKEELDWAFEKI  391 (396)
T ss_pred             HHHCCeEEecCC--CCEEEEECCccc---CHHHHHHHHHHH
Confidence            999999998753  589999999998   589999999975

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.92  E-value=1.1e-24  Score=214.76  Aligned_cols=173  Identities=20%  Similarity=0.237  Sum_probs=147.7

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...||++||+|||+|||||||.+++++++++.||   ++|+++||++|+|++++++++++.+..        ..|++||+
T Consensus       216 ~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~--------~~~~~t~~  287 (401)
T TIGR01885       216 CTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP--------GEHGSTYG  287 (401)
T ss_pred             HHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC--------CCCCCCCC
Confidence            4568999999999999999999999999999999   689999998899999999999987642        35778999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|+++++. +++++   .+++++++++|+++|+++  .++.+.++||.|+|+++++..+..      ......+..
T Consensus       288 ~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l--~~~~~~~~~g~g~~~~i~~~~~~~------~~~~~~l~~  359 (401)
T TIGR01885       288 GNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKL--PKPIITEVRGRGLLNAIVIDESKT------GRTAWDLCL  359 (401)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--cCCceeEEeecCeeEEEEeccCcc------hhHHHHHHH
Confidence            99 999999988 87765   678999999999999988  357778999999999999954211      123567889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.+.+  ++++||.||+++   +++||+++++++
T Consensus       360 ~l~~~Gv~v~~~~--~~~lRi~p~l~~---t~~~i~~~l~~l  396 (401)
T TIGR01885       360 KLKEKGLLAKPTH--GNIIRLAPPLVI---TEEQLDEGLEII  396 (401)
T ss_pred             HHHhCCEEEEecC--CCEEEEeCCccC---CHHHHHHHHHHH
Confidence            9999999998753  689999999988   589999999985

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.92  E-value=2.6e-24  Score=214.29  Aligned_cols=181  Identities=20%  Similarity=0.288  Sum_probs=155.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||+++|+|||+||+||+|.+++++++++.||   ++|++++| +|+|++++++++++.+..        ..|++||+
T Consensus       229 ~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~--------~~~~~t~~  299 (425)
T PRK08088        229 CDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP--------GGLGGTYA  299 (425)
T ss_pred             HHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCC-CcceeeEecHHHHhhcCC--------CCCCCCCC
Confidence            3468999999999999999999999999999999   68999999 599999999999987753        45789999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|+++++. +.++.   +++++++++++++.|+++..++|.+.+|||.|+|++++|.++...+.| +......+.+
T Consensus       300 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p-~~~~~~~l~~  378 (425)
T PRK08088        300 GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKP-NAKLTAQIVA  378 (425)
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCC-CHHHHHHHHH
Confidence            99 999888888 66543   889999999999999999999999999999999999999654322222 2345678999


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++..++++||.||+++   +++||++.++++
T Consensus       379 ~~~~~Gv~~~~~~~~~~~iRl~~~~~~---t~~ei~~~i~~l  417 (425)
T PRK08088        379 RARDKGLILLSCGPYYNVLRILVPLTI---EDAQIRQGLEII  417 (425)
T ss_pred             HHHhCCCEEecCCCCCCEEEEECCCCc---CHHHHHHHHHHH
Confidence            999999998876655799999999988   479999999975

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.92  E-value=2.1e-24  Score=214.11  Aligned_cols=179  Identities=11%  Similarity=0.037  Sum_probs=148.8

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+||| |+|.+|+++++++.||   ++|++++| +|+|++++++++++.+..  .   ....|++||+
T Consensus       225 ~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~--~---~~~~~~~T~~  297 (423)
T TIGR00713       225 TEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAP--E---GPVYQAGTLS  297 (423)
T ss_pred             HHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCc--C---CCeeeccCCC
Confidence            44689999999999999 9999999999999999   68999999 599999999999988752  1   1246889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~  150 (329)
                      +| ++|++++++ +++++   ++++++++++++++|+++.++++.+.++||.|+|++++|..++...     .+ +....
T Consensus       298 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~-~~~~~  376 (423)
T TIGR00713       298 GNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKS-DTELF  376 (423)
T ss_pred             CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcc-cHHHH
Confidence            99 999999999 87765   7899999999999999999899999999999999999997532110     01 12345


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|+++||++.+.+  .+++++.||  +   |++||+++++++
T Consensus       377 ~~~~~~l~~~Gv~v~~~~--~~~~~l~~~--~---t~~~i~~~~~~l  416 (423)
T TIGR00713       377 AKFFHEMLDKGVFLPPSQ--FEACFLSAA--H---TEEDIENTIEAA  416 (423)
T ss_pred             HHHHHHHHHCCeEEecCC--ccceeeECC--C---CHHHHHHHHHHH
Confidence            678889999999987653  357888887  2   689999999975

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.90  E-value=1.9e-23  Score=204.85  Aligned_cols=174  Identities=17%  Similarity=0.189  Sum_probs=148.7

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+||+||+|.+++.+++++.||   ++|+++||++|+|++++++++++.+..        ..+++||+
T Consensus       208 ~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~--------~~~~~t~~  279 (400)
T PTZ00125        208 CKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP--------GEHGSTYG  279 (400)
T ss_pred             HHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC--------CCCCCCCC
Confidence            4578999999999999999999999999999999   689999997799999999999987652        35678999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ +++++++++ +.+++   .+++++++++++++|+++...++.+..+||.|+|.+++|..+.       ......+.+
T Consensus       280 ~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~-------~~~~~~~~~  352 (400)
T PTZ00125        280 GNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSD-------GVNAWDLCL  352 (400)
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCc-------chHHHHHHH
Confidence            99 889888887 77654   6789999999999999997778888889999999999985321       123456888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.+  ++++||.||+++   +++||+++++++
T Consensus       353 ~l~~~Gv~v~~~~--~~~lRi~~~~~~---~~~~i~~~l~~l  389 (400)
T PTZ00125        353 KLKENGLLAKPTH--DNIIRFAPPLVI---TKEQLDQALEII  389 (400)
T ss_pred             HHHHCCeEEeecC--CCEEEEECCccC---CHHHHHHHHHHH
Confidence            9999999998753  689999999988   589999999986

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.90  E-value=2.7e-23  Score=202.39  Aligned_cols=169  Identities=19%  Similarity=0.266  Sum_probs=146.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||+++|+|||+|||||+|.+++++++++.||   ++|++++| +|+|++++++++++.+..        ..|.+||+
T Consensus       197 ~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G-~~ig~v~~~~~~~~~~~~--------~~~~~t~~  267 (377)
T PRK02936        197 CKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGTAFGP--------GSHGSTFG  267 (377)
T ss_pred             HHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCC-CccEEEEEcHHHHhhccC--------CCCCCCCC
Confidence            4578999999999999999999889899999999   68999999 599999999999987752        45788999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|+++++. +.++.   +++++++++++++.|+++..+++.+..++|.|+|+++++.++           ...+..
T Consensus       268 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~-----------~~~~~~  336 (377)
T PRK02936        268 GNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE-----------VAPVIE  336 (377)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch-----------HHHHHH
Confidence            99 999999888 76633   889999999999999997777888889999999999998631           345788


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.+.+  .+.+||.||+++   ++++|++++++.
T Consensus       337 ~l~~~gv~v~~~g--~~~lRi~p~~~~---~~~~i~~~i~~l  373 (377)
T PRK02936        337 QLREEGLLVLSAG--PNVIRLLPPLVV---TKEELDQAVYLL  373 (377)
T ss_pred             HHHHCCeEEecCC--CCEEEEECCccc---CHHHHHHHHHHH
Confidence            8999999998864  579999999998   589999999875

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.90  E-value=4.4e-23  Score=202.68  Aligned_cols=171  Identities=21%  Similarity=0.280  Sum_probs=145.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...||++||+|||+|||||+|.+|+.+++|+.||   ++|+|+||++|+|++++++++++.+..        ..|+.||+
T Consensus       217 ~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~--------~~~~~t~~  288 (401)
T PRK00854        217 CTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP--------GQHGSTFG  288 (401)
T ss_pred             HHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccC--------CCCCCCCC
Confidence            3568999999999999999999888889999999   689999998899999999999987642        46788999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|+++++. +.+++   .+++++++++|.++|+++.  .+.+.+++|.|+|+.+++..+.        .....+.+
T Consensus       289 ~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~g~~~~i~~~~~~--------~~~~~~~~  358 (401)
T PRK00854        289 GNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR--SNIVREVRGRGLMLAVELEPEA--------GGARQYCE  358 (401)
T ss_pred             cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhc--cCceEEEeccceEEEEEEecCc--------hhHHHHHH
Confidence            99 999998888 77654   7899999999999999873  3456789999999999986421        12456889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.+  ++.+|+.||+++   +++||+++++++
T Consensus       359 ~L~~~GV~v~~~~--~~~lR~~p~~~~---t~e~i~~~i~~l  395 (401)
T PRK00854        359 ALKERGLLAKDTH--DHTIRLAPPLVI---TREQVDWALEQI  395 (401)
T ss_pred             HHHHCCeEEecCC--CCEEEEeCCccc---CHHHHHHHHHHH
Confidence            9999999997653  589999999998   589999999985

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.90  E-value=4.9e-23  Score=201.07  Aligned_cols=169  Identities=19%  Similarity=0.253  Sum_probs=146.9

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ...+|+++|+|||+|||||+|.+++++.+|+.||   ++|+|++| +|+|++++++++++.+..        ..|.+||+
T Consensus       195 ~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~--------~~~~~t~~  265 (375)
T PRK04260        195 CQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANG-VPVGAMLAKSSLGGAFGY--------GSHGSTFG  265 (375)
T ss_pred             HHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC--------CCCCCCCC
Confidence            3458999999999999999999889999999999   68999999 599999999999877652        45889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++|+++++. +.+++   ++++++.++++++.|+++..+++.+..++|.|+|++++|..+           ...+.+
T Consensus       266 ~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~  334 (375)
T PRK04260        266 GNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTAD-----------LSQLVE  334 (375)
T ss_pred             cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCc-----------HHHHHH
Confidence            99 999988888 77653   789999999999999998888888889999999999999421           245889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.+  .+.+|+.||+++   +++||+++++++
T Consensus       335 ~l~~~Gi~v~~~~--~~~lR~~~~~~~---t~~~i~~~l~~l  371 (375)
T PRK04260        335 AARDKGLIVLTAG--TNVIRLLPPLTL---TKEEIEQGIAIL  371 (375)
T ss_pred             HHHhCCCEEecCC--CCEEEEcCCCcc---CHHHHHHHHHHH
Confidence            9999999998764  489999999999   489999999875

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.89  E-value=2.1e-22  Score=198.79  Aligned_cols=174  Identities=14%  Similarity=0.213  Sum_probs=148.1

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||+++|+|||++||||+|.+++++++++.||   ++|++++| +|+|++++++++++.+..        ..|++||
T Consensus       213 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~vv~~~~i~~~l~~--------~~~~~t~  283 (403)
T PRK05093        213 LCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFKV--------GTHGSTY  283 (403)
T ss_pred             HHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC--------CCCCCCC
Confidence            34578999999999999999999888899999999   68999999 599999999999987753        4678899


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +++ ++|++++++ +++++   .+++++++++|.++|+++..+++.+.+++|.|+|+++++..+.       ......++
T Consensus       284 ~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~-------~~~~~~~~  356 (403)
T PRK05093        284 GGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY-------KGRARDFL  356 (403)
T ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc-------hhHHHHHH
Confidence            988 888888887 66654   7889999999999999987777888899999999999995321       12356788


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.+.|  .+.+|+.||+++   +++||+++++++
T Consensus       357 ~~l~~~Gv~v~~~g--~~~lRl~~~~~~---~~~~i~~~~~~l  394 (403)
T PRK05093        357 NAAAEEGVMVLVAG--PDVLRFAPSLVI---EEADIDEGLARF  394 (403)
T ss_pred             HHHHHCCeEEecCC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            99999999998754  489999999997   589999999975

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.88  E-value=3.4e-22  Score=195.20  Aligned_cols=168  Identities=23%  Similarity=0.323  Sum_probs=145.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..||++||+|||++||||+|.+++++++++.||   ++|++++| +|+|++++++++++.+..        ..|.+||++
T Consensus       213 ~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~~--------~~~~~t~~~  283 (396)
T PRK02627        213 DENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTP--------GDHGSTFGG  283 (396)
T ss_pred             HHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccCC--------CCCCCCCCC
Confidence            357999999999999999999889999999999   68999999 599999999999887652        457889999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++|+++++. +.+++   .+++++++++++++|+++..++|.+..++|.|+|+++++..           ....+...
T Consensus       284 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-----------~~~~~~~~  352 (396)
T PRK02627        284 NPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR-----------PAAEIVKK  352 (396)
T ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC-----------cHHHHHHH
Confidence            9 999998888 76644   78999999999999999988888888999999999999831           13568889


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+++  .+.+|+.||+.+   +++|+++++++.
T Consensus       353 l~~~Gv~v~~~~--~~~lRi~~~~~~---~~~~i~~~~~~l  388 (396)
T PRK02627        353 ALEKGLLINVTG--DNVLRLLPPLII---SKEEIDEAVDRL  388 (396)
T ss_pred             HHHCCeEEeecC--CCEEEEECCccc---CHHHHHHHHHHH
Confidence            999999998864  578999999987   589999999975

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.87  E-value=1.4e-21  Score=191.35  Aligned_cols=181  Identities=27%  Similarity=0.407  Sum_probs=150.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||+++|+|||++||||+|..++++++++.||   ++|++++| +|+|++++++++++.+..      ....|++||+
T Consensus       221 ~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~~------~~~~~~~t~~  293 (413)
T cd00610         221 CRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFPA------GPGLHGGTFG  293 (413)
T ss_pred             HHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhcc------CCCCCCCCCC
Confidence            3468999999999999999999889999999999   68999999 699999999999987610      1256789999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++ ++++++++. +++++   .+++++++++++++|+++...++.+..+++.|+|+++++..+.....+ +......+.+
T Consensus       294 ~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~  372 (413)
T cd00610         294 GNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPP-DKELAAKIIK  372 (413)
T ss_pred             cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCc-chHHHHHHHH
Confidence            99 888888888 77754   789999999999999998877788888999999999999754221111 1234567889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+.+  ++.+|+.|++..   |++||+++++++
T Consensus       373 ~l~~~gv~v~~~~--~~~lR~~~~~~~---t~~~i~~~~~~l  409 (413)
T cd00610         373 AALERGLLLRPSG--GNVIRLLPPLII---TEEEIDEGLDAL  409 (413)
T ss_pred             HHHHCCeEEeecC--CCEEEEECCCcC---CHHHHHHHHHHH
Confidence            9999999998854  689999999887   589999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>KOG1405|consensus

Probab=99.78  E-value=4.2e-19  Score=170.81  Aligned_cols=167  Identities=18%  Similarity=0.232  Sum_probs=129.7

Q ss_pred             CccccccceEEehhHhhchhccchhhhhcccCC--cch---HH-HhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           2 DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF---VQ-KDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         2 ~~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD---i~-KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      |+|.+||+.+|+||||||-|-||++||+|||++  .||   ++ |-++|||+-       .   +.|.+  +   .++.|
T Consensus       299 di~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGffh-------~---~~frp--n---~pYri  363 (484)
T KOG1405|consen  299 DITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGFFH-------D---EEFRP--N---EPYRI  363 (484)
T ss_pred             HHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcccc-------C---cccCC--C---chHHH
Confidence            678899999999999999999999999999998  468   34 788898731       1   11221  1   12445


Q ss_pred             chhhhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      -.||-|. --+.-.-+. +++++   +++++..|+.|.++|.+|+++||. +..+||+|.++++++..         ...
T Consensus       364 fNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps---------~~~  434 (484)
T KOG1405|consen  364 FNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS---------GSI  434 (484)
T ss_pred             hhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC---------hHH
Confidence            5778777 222222222 55544   889999999999999999999995 78999999999999964         245


Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...++..++-+||-+..||  ...|||.|.|+..+   ...+-+++++
T Consensus       435 Rdk~i~~~~~nGv~~GGCg--~~siRfRPsLvf~~---~Ha~i~l~~~  477 (484)
T KOG1405|consen  435 RDKLILIARLNGVNLGGCG--DKSIRFRPSLVFRK---HHADIFLDIF  477 (484)
T ss_pred             HHHHHHHHHHcCceecccc--cceeeeccceeehh---hhHHHHHHHH
Confidence            7789999999999999887  57899999999964   4666677664

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.71  E-value=3.3e-17  Score=162.10  Aligned_cols=182  Identities=11%  Similarity=0.028  Sum_probs=126.9

Q ss_pred             cccccceEEehhHhh--chhccchhhhhcccCCcc----hH-HHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           4 TYYRDCGVVVSAVDF--GSGDNGTYLGFQCLQICR----FV-QKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         4 ~~~~giLLI~DEVqT--GfGRTG~~fA~e~~GV~P----Di-~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+||++||+||+++  ++|++|. |+++++|+.|    |+ .=++++|+.|+ |++++++++++.+..        ..|
T Consensus       164 ~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~--------~~~  234 (392)
T PLN03227        164 KEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRL--------SGS  234 (392)
T ss_pred             HHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHH--------hCc
Confidence            346899999999998  5667776 6899999999    82 11233332255 556789998876642        457


Q ss_pred             chhhhcc---HHHHHHHHh--hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEee--------ceeeEEEeecCC
Q psy7882          76 KLKISDT---VRPHVQIKK--SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK--------GLMIGVDLVQDK  139 (329)
Q Consensus        76 g~T~agn---lA~aaala~--~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~--------GLm~gIef~~d~  139 (329)
                      +.||+++   ..|+++++.  .++++   ++++++++++|+++|++  ..+|.+.+|||.        |+|++|++.+++
T Consensus       235 ~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~  312 (392)
T PLN03227        235 GYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--SSHPYALKLRNRLVITSDPISPIIYLRLSDQE  312 (392)
T ss_pred             CccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--cCCccccccccccccCCCCCCCEEEEEeCCHH
Confidence            7888886   345555544  33322   78899999999999987  467889999984        457999996432


Q ss_pred             CCCCCCC-hHHHHHHHHHHHHCCceeeccCCC-CCEEEEeCcccc-----CcCCHHHHHHHHhcc
Q psy7882         140 ETKVPLN-SRHMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLL-----NYWTDFVGTPCLDCE  197 (329)
Q Consensus       140 ~~~~p~~-~~~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~I-----t~~t~eeId~~l~~~  197 (329)
                      ... +++ ......+.+.|+++|+++.+.+.. ...+++.||+++     ..||++|||++++++
T Consensus       313 ~~~-~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l  376 (392)
T PLN03227        313 ATR-RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVL  376 (392)
T ss_pred             Hhh-hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            211 111 123467899999999999765411 123467788876     456789999999986

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.71  E-value=1.5e-16  Score=154.33  Aligned_cols=167  Identities=21%  Similarity=0.327  Sum_probs=135.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..+|+++|+||+++|||++|..++++.+++.||   ++|++++| +|+|++++++++++.+..        ..++.+|++
T Consensus       201 ~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G-~riG~~~~~~~~~~~~~~--------~~~~~~~~~  271 (379)
T TIGR00707       201 KDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTP--------GDHGSTFGG  271 (379)
T ss_pred             HHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCC-cccEEEEEcHHHHhhhcC--------CCCCCCCCC
Confidence            357999999999999999998777778899999   68999988 599999999999887753        346677888


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++.+. +.+++   .+++++++++++++|+++...++. ..+++.|.++.+++..+           ...+.+.
T Consensus       272 ~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~~-----------~~~~~~~  339 (379)
T TIGR00707       272 NPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPN-KEVRGKGLMLGIELEAP-----------CKDIVKK  339 (379)
T ss_pred             CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCC-CccccCceEEEEEecCc-----------HHHHHHH
Confidence            8 888777766 65543   678999999999999987555543 56778899999987531           2457888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+.+  .+.+|+.|+++.   +++++++++++.
T Consensus       340 l~~~Gv~v~~~~--~~~lRi~~~~~~---t~~~i~~~~~~l  375 (379)
T TIGR00707       340 ALEKGLLVNCAG--PKVLRFLPPLII---TKEEIDEAVSAL  375 (379)
T ss_pred             HHHCCcEEeeCC--CCEEEEECCCcC---CHHHHHHHHHHH
Confidence            999999999854  478999999887   589999999875

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK07505 hypothetical protein; Provisional

Probab=99.53  E-value=8.8e-14  Score=137.29  Aligned_cols=168  Identities=12%  Similarity=-0.029  Sum_probs=117.3

Q ss_pred             ccccceEEehhHh--hchhccchhhhhcccCC-cch-------HHHhhcCCccccceee-echhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVD--FGSGDNGTYLGFQCLQI-CRF-------VQKDFKGSFWDKLIVH-TSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVq--TGfGRTG~~fA~e~~GV-~PD-------i~KaLgGG~~PigAv~-~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|++||+||++  +|+||+|.+++.+++++ .||       ++|++++|.   |.++ .++++.+.+..        .
T Consensus       206 ~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~--------~  274 (402)
T PRK07505        206 EKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILR--------Y  274 (402)
T ss_pred             HHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHH--------h
Confidence            4579999999997  89999999888899998 888       479988642   3344 46788877753        4


Q ss_pred             ccchhhhcc---HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          74 AHKLKISDT---VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        74 ~hg~T~agn---lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .|+.||+++   ++|+++++. +++.+ +.+.++.+++++.+..+...  ....++|.|+++......+        ...
T Consensus       275 ~~~~t~~~~~~~~a~aa~~a~l~~~~~-~~~~~~~~~l~~~~~~~~~~--~~~~~~g~~~~i~~~~~~~--------~~~  343 (402)
T PRK07505        275 AGPLAFSQSLNVAALGAILASAEIHLS-EELDQLQQKLQNNIALFDSL--IPTEQSGSFLPIRLIYIGD--------EDT  343 (402)
T ss_pred             CCCceeCCCCCHHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHH--HHhcCCCCCCCEEEEEeCC--------HHH
Confidence            577888776   578887777 65432 22334455566655543221  1234688888764432221        123


Q ss_pred             HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|+++||++.++.     ...+.|||+||+++   |++|++++++++
T Consensus       344 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~---t~eei~~~~~~l  393 (402)
T PRK07505        344 AIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASH---TNDEIKRLCSLL  393 (402)
T ss_pred             HHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccC---CHHHHHHHHHHH
Confidence            5678899999999998752     12379999999998   589999999985

>PLN02822 serine palmitoyltransferase

Probab=99.39  E-value=2.9e-12  Score=130.37  Aligned_cols=174  Identities=12%  Similarity=0.021  Sum_probs=119.1

Q ss_pred             ccccccceEEehhHhh--chhccchhhhhcccCC---cch-----HHHhhc--CCccccceeeechhHHHhhhhhhhccC
Q psy7882           3 TTYYRDCGVVVSAVDF--GSGDNGTYLGFQCLQI---CRF-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQIL   70 (329)
Q Consensus         3 ~~~~~giLLI~DEVqT--GfGRTG~~fA~e~~GV---~PD-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~   70 (329)
                      +..+||++||+||+++  .+|++|.. .++++|+   .||     ++|+++  ||+     +++++++++.+..      
T Consensus       270 l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~~GG~-----i~g~~~ii~~~~~------  337 (481)
T PLN02822        270 LKEKYRFRVLLDESNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALATEGGF-----CTGSARVVDHQRL------  337 (481)
T ss_pred             HHHHcCCEEEEECCccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhhCCeE-----EEcCHHHHHHHHh------
Confidence            3457899999999999  67888875 6899999   678     569998  764     6689999987652      


Q ss_pred             CCCccchhhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC
Q psy7882          71 KTPAHKLKISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK  142 (329)
Q Consensus        71 ~~~~hg~T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~  142 (329)
                        ..|+.||+++   ..+++++++ +.+++    .+++++++++|+++|+++.   +.....-+.+.++.+.+.......
T Consensus       338 --~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~  412 (481)
T PLN02822        338 --SSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSA  412 (481)
T ss_pred             --cCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccc
Confidence              4678899886   455666666 55533    7788999999999998752   211111245677777774311100


Q ss_pred             CCCChHHHHHHHHHHH-HCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHILDSCK-EHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~-e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . -+......+.+.|+ ++||++.+...       .+..+|++   +...||++||++++++.
T Consensus       413 ~-~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~---is~~~t~edI~~~~~~l  471 (481)
T PLN02822        413 K-EDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLF---VSAGHTESDILKASESL  471 (481)
T ss_pred             c-chHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEE---ECCCCCHHHHHHHHHHH
Confidence            0 01234567889988 88999986421       12346664   23456899999999985

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.34  E-value=1.4e-11  Score=121.76  Aligned_cols=162  Identities=14%  Similarity=0.044  Sum_probs=113.8

Q ss_pred             ccccceEEehhHhh-ch-hccchhhhhcccCCc--ch-----HHHhhc--CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDF-GS-GDNGTYLGFQCLQIC--RF-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqT-Gf-GRTG~~fA~e~~GV~--PD-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|+++|+||+|+ |+ |++|..+ .+++++.  ||     ++|+++  ||+     +++++++.+.+..        .
T Consensus       204 ~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~~GG~-----~~~~~~~~~~l~~--------~  269 (406)
T PRK13393        204 EKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGVMGGY-----ITGSAALCDFIRS--------F  269 (406)
T ss_pred             HHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcccCce-----eeCCHHHHHHHHH--------h
Confidence            35799999999998 88 8998765 4778876  46     469998  443     5678888877653        1


Q ss_pred             ccc--hhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882          74 AHK--LKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        74 ~hg--~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~  145 (329)
                      .++  .|.+.+ .+++++++. +.+++    .++..+++++|++.|+++  .++   .+++.|.|+.+.+..        
T Consensus       270 ~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~~~~i~~v~~~~--------  336 (406)
T PRK13393        270 ASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA--GIP---HLPNPSHIVPVMVGD--------  336 (406)
T ss_pred             CcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCC---cCCCCCCeEEEEeCC--------
Confidence            222  345556 667777666 65543    345567888888888764  233   346788898886632        


Q ss_pred             ChHHHHHHHHHHHH-CCceeeccC----C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKE-HGLLLGRGG----L-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e-~GVLl~~~G----~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ......+.+.|++ +||++.+..    + ..+.+|+.|++.+   |++|+|++++++
T Consensus       337 -~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~---t~edid~l~~~l  390 (406)
T PRK13393        337 -PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLH---TDADIEHLVQAL  390 (406)
T ss_pred             -HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence             1234568888887 599997632    1 2378999999998   589999999985

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.24  E-value=1.1e-10  Score=115.11  Aligned_cols=164  Identities=13%  Similarity=0.088  Sum_probs=111.6

Q ss_pred             ccccceEEehhHhh-c-hhccchhhhhcccCC--cch-----HHHhhc--CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQI--CRF-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV--~PD-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|++||+||+++ | ||++|..+ .++.++  .||     ++|++|  ||     .+++++++++.+..  ..    .
T Consensus       205 ~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~GG-----~~~~~~~~~~~l~~--~~----~  272 (407)
T PRK09064        205 DKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGVMGG-----YIAGSAALVDAVRS--YA----P  272 (407)
T ss_pred             HHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhccCc-----eEecCHHHHHHHHH--hC----c
Confidence            35799999999998 7 58998765 567776  467     579997  54     36678888887653  11    0


Q ss_pred             ccchhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          74 AHKLKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        74 ~hg~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      .+..|.+.+ .+++++++. +.+++    .+++++++++|.+.|+++  .++.+.   ..+.++.+.+..         .
T Consensus       273 ~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~iv~i~~~~---------~  338 (407)
T PRK09064        273 GFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA--GIPVMP---NESHIVPVMVGD---------P  338 (407)
T ss_pred             cccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCCC---CCCCEEEEEeCC---------H
Confidence            112244555 677777776 66654    467888889999988875  233322   335666666532         1


Q ss_pred             HHHHHHHHHHHH-CCceeeccC----C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKE-HGLLLGRGG----L-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e-~GVLl~~~G----~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+.+.|++ +||++.+..    + ..+.+|+.|++.+   |++|++++++++
T Consensus       339 ~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~---t~edi~~l~~~l  391 (407)
T PRK09064        339 EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFH---TDEMIDHLVEAL  391 (407)
T ss_pred             HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence            234567888875 699997632    1 2368999999887   589999999985

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.21  E-value=2.3e-10  Score=112.84  Aligned_cols=166  Identities=13%  Similarity=0.007  Sum_probs=109.0

Q ss_pred             ccccceEEehhHhh-c-hhccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||++||+||+++ | +|.+|.. ..+++++  .||     ++|++++   +-|.+++++++++.+..  ..    ..+
T Consensus       204 ~~~~~~livDea~~~G~~g~~g~g-~~~~~~~~~~~div~~t~sKa~g~---~GG~i~~~~~~~~~l~~--~~----~~~  273 (402)
T TIGR01821       204 DKYGALTYLDEVHAVGLYGPRGGG-IAERDGLMHRIDIIEGTLAKAFGV---VGGYIAASRKLIDAIRS--YA----PGF  273 (402)
T ss_pred             HHcCCEEEEeCcccccccCCCCCc-cchhccCCCCCeEEEEechhhhcc---CCceeecCHHHHHHHHH--hC----cCc
Confidence            35799999999999 5 3566653 3467776  467     5799972   11346788888887753  11    011


Q ss_pred             chhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      ..|.+.+ .+|+++++. +.+++    .++..+++++|.++|+++  .++.+   ...|.++.+.+..         ...
T Consensus       274 ~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~i~~i~~~~---------~~~  339 (402)
T TIGR01821       274 IFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL--GIPVI---PNPSHIVPVIIGD---------AAL  339 (402)
T ss_pred             eecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc--CCCcC---CCCCCEEEEEeCC---------HHH
Confidence            1244556 677777776 66543    345567788888888764  23322   2356777776532         123


Q ss_pred             HHHHHHHHHH-CCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKE-HGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e-~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|++ +||++.+..     ...+.+|+.|++..   |++|||++++++
T Consensus       340 a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~---t~edi~~~~~~l  390 (402)
T TIGR01821       340 CKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAH---TDKMIDDLVEAL  390 (402)
T ss_pred             HHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence            4568888875 699997642     12368999999987   589999999985

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK07179 hypothetical protein; Provisional

Probab=99.18  E-value=2.6e-10  Score=112.68  Aligned_cols=167  Identities=16%  Similarity=0.123  Sum_probs=112.2

Q ss_pred             ccccceEEehhHhhc--hhccchhhhhcccCCcc--h-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFG--SGDNGTYLGFQCLQICR--F-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTG--fGRTG~~fA~e~~GV~P--D-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|++||+||+++.  +|++|..+ ++++|+.+  |     ++|++++   ++|++++++++++.+..  .  ..+..|
T Consensus       208 ~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~--~--~~~~~~  279 (407)
T PRK07179        208 EEFGCVLVVDESHSLGTHGPQGAGL-VAELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPF--V--SYPAIF  279 (407)
T ss_pred             HHcCCEEEEECcccccCcCCCCCch-HHhcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHH--h--CcCeee
Confidence            457999999999984  45566533 45778765  7     3699974   58999999988776642  1  112346


Q ss_pred             chhhhcc-HH-HHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDT-VR-PHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agn-lA-~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      ++|+... ++ ..++++. +..++ .++++++.++|+++|+++  .+    ++++.|.++.+++..+         ....
T Consensus       280 ~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~----~v~~~~~i~~l~~~~~---------~~~~  344 (407)
T PRK07179        280 SSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL--GY----NIRSESQIIALETGSE---------RNTE  344 (407)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CC----CCCCCCCEEEEEeCCH---------HHHH
Confidence            6666655 32 2233332 11122 678889999999999875  22    4557788988887421         1245


Q ss_pred             HHHHHHHHCCceee----ccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLG----RGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~----~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|.++||+..    +... ..+.+||.|+..+   |++||+++++++
T Consensus       345 ~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~---t~edi~~~~~~l  392 (407)
T PRK07179        345 VLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADL---TASDLDRVLEVC  392 (407)
T ss_pred             HHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence            57788999999743    2111 2479999999877   589999999985

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=98.90  E-value=2.7e-08  Score=96.86  Aligned_cols=166  Identities=10%  Similarity=-0.022  Sum_probs=103.2

Q ss_pred             ccccceEEehhHhh-c-hhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++. | ++++|. ++..++++.||       ++|++++   +.|.+++++++++.+..  ..  ..+ +
T Consensus       190 ~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~--~~--~~~-~  260 (385)
T TIGR01825       190 ERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKN--RA--RPF-L  260 (385)
T ss_pred             HHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHH--hC--ccc-c
Confidence            46899999999995 4 555664 34566777776       4699953   34667788888887753  11  011 1


Q ss_pred             chhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .++ ..+ ..++++.+. +.++   + .+++.++++++.++|+++  ..+..   ...+.++++.+..         ...
T Consensus       261 ~~~-~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~~~~~~~---------~~~  325 (385)
T TIGR01825       261 FST-AQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL--GYDTG---GSETPITPVVIGD---------EKA  325 (385)
T ss_pred             ccC-CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCC---CCCCCEEEEEECC---------HHH
Confidence            111 122 333333333 3322   2 567788888898888775  22221   1223455555421         112


Q ss_pred             HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|+++||++.+.+     ...+.+|++|++.+   +++||++++++.
T Consensus       326 ~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~---~~e~i~~~~~~l  375 (385)
T TIGR01825       326 AQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEH---TKDDLDQALDAY  375 (385)
T ss_pred             HHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCC---CHHHHHHHHHHH
Confidence            4568889999999885321     12378999999988   589999999985

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=98.85  E-value=5.6e-08  Score=94.06  Aligned_cols=166  Identities=12%  Similarity=0.019  Sum_probs=105.7

Q ss_pred             ccccceEEehhHhh-c-hhccchhhhhcccC--Ccch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQ--ICRF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~G--V~PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|+||++. | ++++|..+ ....+  ..||      ++|+++.   +-|.+++++++++.+..  ..    ..
T Consensus       195 ~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~--~~----~~  264 (385)
T PRK05958        195 RRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLIN--RA----RP  264 (385)
T ss_pred             HHhCCEEEEECcccccccCCCCCch-HHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHH--hC----cc
Confidence            45799999999995 4 45555433 22233  3455      4699964   33777888888877642  10    11


Q ss_pred             cchhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          75 HKLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +..+.+.+ ++++++.+. +.++   + .+++.++++++.+.|+++  ..+   -+.+.|.++.+.+..         ..
T Consensus       265 ~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~---~~~~~~~~~~~~~~~---------~~  330 (385)
T PRK05958        265 FIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL--GFQ---LMDSQSAIQPLIVGD---------NE  330 (385)
T ss_pred             ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCC---cCCCCCCEEEEEeCC---------HH
Confidence            22233344 555444443 3332   2 577888888888888875  122   234567788777632         12


Q ss_pred             HHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|.++||++.+.+.     ..+.+|+.|++.+   +++|++++++++
T Consensus       331 ~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~---~~~~i~~~l~~l  381 (385)
T PRK05958        331 RALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAH---TEADIDRLLEAL  381 (385)
T ss_pred             HHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCC---CHHHHHHHHHHH
Confidence            345688899999999976321     2478999999876   589999999875

>PLN02955 8-amino-7-oxononanoate synthase

Probab=98.83  E-value=3.4e-08  Score=100.49  Aligned_cols=157  Identities=9%  Similarity=-0.097  Sum_probs=96.8

Q ss_pred             cccccceEEehhHhhchhccch--hhhhcccCCcch-------HHHhhc--CCccccceeeechhHHHhhhhhhhccCCC
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF-------VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQILKT   72 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD-------i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~~~   72 (329)
                      ...||++||+||+.+ +|+.|.  .+.++++|+.||       ++|++|  |||     +++++++++.+..        
T Consensus       275 ~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~GGf-----i~gs~~~~~~l~~--------  340 (476)
T PLN02955        275 RKKYGFLLVIDDAHG-TFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHGGF-----IACSKKWKQLIQS--------  340 (476)
T ss_pred             HHHcCcEEEEccccc-CceecCCCCcHHHHhCCCCCCcEEEEeCccchhccCce-----eecHHHHHHHHHH--------
Confidence            345799999999997 445554  567889999988       479998  775     7888888887763        


Q ss_pred             Cccchhhhcc--HHHH-HHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882          73 PAHKLKISDT--VRPH-VQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        73 ~~hg~T~agn--lA~a-aala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p  144 (329)
                      ...+..|+++  .+++ ++++. +++.+    .+++.+..++|++.       .+..  +  ...++.|.+..       
T Consensus       341 ~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~-------~G~~--~--~sPI~pI~ig~-------  402 (476)
T PLN02955        341 RGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL-------SGVD--I--SSPIISLVVGN-------  402 (476)
T ss_pred             hCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-------cCCC--C--CCCEEEEEeCC-------
Confidence            1122233333  3443 33444 55532    23333333333331       1111  1  13455555542       


Q ss_pred             CChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        +..+..+.+.|+++|+++.+..+     ....+|+.   +...||++||+.+++++
T Consensus       403 --~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~---lsA~Ht~edId~lv~~L  455 (476)
T PLN02955        403 --QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVT---LSAAHTTEDVKKLITAL  455 (476)
T ss_pred             --HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEe---eCCCCCHHHHHHHHHHH
Confidence              34566789999999999875321     12346664   34568999999999985

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=98.73  E-value=2.3e-07  Score=90.30  Aligned_cols=169  Identities=13%  Similarity=0.056  Sum_probs=102.5

Q ss_pred             cccccceEEehhHhh-ch-hccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           4 TYYRDCGVVVSAVDF-GS-GDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         4 ~~~~giLLI~DEVqT-Gf-GRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      -.+||+++|.||++. |+ +++|. +....+++.  +|     ++|+++|+  ++|.+++++++++.+..  ..  .++.
T Consensus       200 a~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~g~--r~G~v~~~~~~~~~l~~--~~--~~~~  272 (397)
T PRK06939        200 ADKYDALVMVDDSHAVGFVGENGR-GTVEHFGVMDRVDIITGTLGKALGGA--SGGYTAGRKEVIDWLRQ--RS--RPYL  272 (397)
T ss_pred             HHHhCCEEEEECcccccCcCCCCC-CHHHHcCCCCCCcEEEEECHHHhCcc--CceEEEeCHHHHHHHHH--hC--cccc
Confidence            346799999999994 54 34443 234556663  46     47999654  68888899999887753  10  1112


Q ss_pred             cchhhhccHHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          75 HKLKISDTVRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        75 hg~T~agnlA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      ++++... ..++++++. +.++   + .++.+++.+++.+.|+++    +. ..+.+.|.++.+.+..         ...
T Consensus       273 ~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~---------~~~  337 (397)
T PRK06939        273 FSNSLAP-AIVAASIKVLELLEESDELRDRLWENARYFREGMTAA----GF-TLGPGEHPIIPVMLGD---------AKL  337 (397)
T ss_pred             ccCCCCH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CC-CcCCCCCCEEEEEECC---------HHH
Confidence            2222111 223333333 3332   2 456777777787877664    21 1123456666554421         112


Q ss_pred             HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||.+.+..     ...+.+|+.+++..   +++||+++++.+
T Consensus       338 ~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~l~~L  387 (397)
T PRK06939        338 AQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAH---TKEQLDRAIDAF  387 (397)
T ss_pred             HHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence            4568889999999887531     12367999988776   579999999975

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=98.72  E-value=1.8e-07  Score=92.58  Aligned_cols=166  Identities=12%  Similarity=-0.017  Sum_probs=101.4

Q ss_pred             ccccceEEehhHhh-ch-hccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDF-GS-GDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqT-Gf-GRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|+||+++ |+ |+.|..+ .++.++  .+|     ++|+++.   +-|.+++++++++.+..  ..   ...+
T Consensus       205 ~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~--~~---~~~~  275 (410)
T PRK13392        205 DRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRS--FA---PGFI  275 (410)
T ss_pred             HHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHH--hC---cchh
Confidence            45799999999999 65 6776544 455665  456     5799864   22456678888876543  11   0111


Q ss_pred             chhhhcc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                       .|.+.+ .+++++.+. +.++.    .+++++..++|++.|+++  ..+.   +.+.+.++.+.+..         ...
T Consensus       276 -~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~~~~---------~~~  340 (410)
T PRK13392        276 -FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN--GIPV---MPSPSHIVPVMVGD---------PTL  340 (410)
T ss_pred             -ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC---CCCCCCEEEEEeCC---------HHH
Confidence             223333 445554444 44432    345667777777777664  1222   12345555554431         123


Q ss_pred             HHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|+ ++||++.+...     ....+|+.|++..   |++|+|.+++++
T Consensus       341 ~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~---t~edid~l~~aL  391 (410)
T PRK13392        341 CKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLH---DDEDIDALVAAL  391 (410)
T ss_pred             HHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence            456888886 68999986421     2368999999877   589999999986

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=98.67  E-value=5.1e-07  Score=86.32  Aligned_cols=166  Identities=10%  Similarity=0.017  Sum_probs=101.9

Q ss_pred             ccccceEEehhHhhchhccch--hhhhcccCCcch--------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF--------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD--------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..+|+++|.||+++ +|..+.  ......+++.||        ++|++++   +-|.+++++++++.+..  ..    ..
T Consensus       173 ~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~--~~----~~  242 (360)
T TIGR00858       173 ERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLIN--RA----RT  242 (360)
T ss_pred             HHcCcEEEEECccc-ccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHH--hC----cc
Confidence            45799999999997 444332  123456777765        4699865   33778888888877643  00    01


Q ss_pred             cchhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          75 HKLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +..+.+.+ .+++++++. +.++   + .+++++..++|.++|+++  ....   ....|.++.+.+..         ..
T Consensus       243 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~---~~~~~~~~~~~~~~---------~~  308 (360)
T TIGR00858       243 LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL--GFTL---MPSCTPIVPVIIGD---------NA  308 (360)
T ss_pred             ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCcc---CCCCCCEEEEEeCC---------HH
Confidence            11112223 334333333 3322   2 567888888888888764  1211   12346677777632         11


Q ss_pred             HHHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      -...+.+.|.++||++.+..     ..++.+|+.|+...   +++|++++++++
T Consensus       309 ~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~---~~~~i~~~l~~l  359 (360)
T TIGR00858       309 SALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAH---TPGDIDRLAEAL  359 (360)
T ss_pred             HHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCC---CHHHHHHHHHhh
Confidence            24568889999999997521     12468999999876   579999999864

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=98.65  E-value=3.2e-07  Score=89.33  Aligned_cols=158  Identities=11%  Similarity=0.007  Sum_probs=93.8

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ++++|.||+.++|++.|...+.+..+..|+      ++|+++ .| +++|.+++++++++.+..  ..        .+|.
T Consensus       190 ~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~--~~--------~~~~  258 (368)
T PRK03317        190 PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRL--VR--------LPYH  258 (368)
T ss_pred             CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHh--cC--------CCCC
Confidence            689999999999987775555555565677      579997 68 599999999999988763  11        1233


Q ss_pred             cc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEE-EeecCCCCCCCCChHHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGV-DLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        81 gn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gI-ef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      .+ ++++++.+. +..+. .++++++.+. ++.+.+...+++. .-....|.++-+ .+.            ....+.+.
T Consensus       259 ~s~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~------------~~~~~~~~  324 (368)
T PRK03317        259 LSAVTQAAARAALRHADELLASVAALRAE-RDRVVAWLRELGL-RVAPSDANFVLFGRFA------------DRHAVWQG  324 (368)
T ss_pred             CCHHHHHHHHHHhhCHHHHHHHHHHHHHH-HHHHHHHHHHCCC-EeCCCCCcEEEEeccC------------CHHHHHHH
Confidence            33 444333332 21111 2233333222 2223333333432 112233333222 110            13458888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+.+ ..+.+|+.-      ++.++++.+++++
T Consensus       325 l~~~Gv~v~~~~-~~~~iRi~~------~~~~~~~~~~~~l  358 (368)
T PRK03317        325 LLDRGVLIRDVG-IPGWLRVTI------GTPEENDAFLAAL  358 (368)
T ss_pred             HHHCCEEEEeCC-CCCeEEEec------CCHHHHHHHHHHH
Confidence            999999998765 357888862      1568899998875

>PLN02483 serine palmitoyltransferase

Probab=98.64  E-value=6e-07  Score=91.81  Aligned_cols=165  Identities=12%  Similarity=0.082  Sum_probs=102.3

Q ss_pred             ccccceEEehhHhh--chhccchhhhhcccCCcc---h-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDF--GSGDNGTYLGFQCLQICR---F-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqT--GfGRTG~~fA~e~~GV~P---D-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      .++|+++|+||+++  .+|++|.. ..+++++.|   |     ++|+++.   +-|.+++++++.+.+..        ..
T Consensus       267 ~~~~~~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l~~--------~~  334 (489)
T PLN02483        267 KKYKAYVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKR--------TC  334 (489)
T ss_pred             HHcCCEEEEECcCccCccCCCCCc-hHHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHHHH--------hC
Confidence            45799999999996  25667754 567889876   3     4699863   22557788999887763        22


Q ss_pred             cchhhhc--c-HHHHHHHHh-hHHh---------H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC
Q psy7882          75 HKLKISD--T-VRPHVQIKK-SVLE---------R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE  140 (329)
Q Consensus        75 hg~T~ag--n-lA~aaala~-~ile---------~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~  140 (329)
                      ++.+|++  + .+++++++. +++.         + .++.++..++|+++|+++  ..+....  ..+.++++.+..   
T Consensus       335 ~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~--G~~v~~~--~~sp~~~l~l~~---  407 (489)
T PLN02483        335 PAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM--GFEVLGD--NDSPVMPIMLYN---  407 (489)
T ss_pred             ccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC--CCcccCC--CCCCEEEEEECC---
Confidence            3333332  2 333333333 3221         1 456667777777777764  1211111  123555665532   


Q ss_pred             CCCCCChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                            ......+.+.|+++||.+.+.+.     ....+||+.+...   +++||+++++++
T Consensus       408 ------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~---t~edId~~l~~L  460 (489)
T PLN02483        408 ------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASH---SREDLIKALEVI  460 (489)
T ss_pred             ------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence                  12345688899999999986432     1257888776654   689999999985

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=98.62  E-value=7e-07  Score=87.29  Aligned_cols=168  Identities=12%  Similarity=0.038  Sum_probs=100.5

Q ss_pred             ccccceEEehhHh-hch-hccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||++||.||++ .|+ |..|. +..+..++.  +|     ++|+++|+  ..|.+.+++++++.+..  ..  .++..
T Consensus       197 ~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~di~~~s~sK~l~g~--r~G~~~~~~~~~~~l~~--~~--~~~~~  269 (393)
T TIGR01822       197 DKYDALVMVDECHATGFLGPTGR-GSHELCGVMGRVDIITGTLGKALGGA--SGGFTTARKEVVELLRQ--RS--RPYLF  269 (393)
T ss_pred             HHcCCEEEEECCccccCcCCCCC-chHHhcCCCCCCeEEEEEChHHhhCC--CcEEEEeCHHHHHHHHH--hC--cccee
Confidence            4689999999998 343 33433 233455654  45     46999763  68888999999887653  00  11112


Q ss_pred             chhhhccHHHHHHHHh-hHH---hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          76 KLKISDTVRPHVQIKK-SVL---ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        76 g~T~agnlA~aaala~-~il---e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      ++|... ..++++++. +.+   ++ .++++++.+++.++|+++  .....   .+.+.+..+.+..         ....
T Consensus       270 ~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~~i~~~~---------~~~~  334 (393)
T TIGR01822       270 SNSLPP-AVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA--GFDIK---PADHPIIPVMLYD---------AVLA  334 (393)
T ss_pred             cCCCCH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCCC---CCCCCEEEEEeCC---------HHHH
Confidence            222111 222233333 333   22 567788888888888763  22211   1234555555432         1234


Q ss_pred             HHHHHHHHHCCceeeccC----C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGG----L-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G----~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++....    . ....+|+.+.+..   +++||+++++++
T Consensus       335 ~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~---t~edi~~~~~~l  383 (393)
T TIGR01822       335 QRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAH---TEEQLDRAVEAF  383 (393)
T ss_pred             HHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence            568888999999886321    1 2246899888765   689999999985

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd00609 AAT_like Aspartate aminotransferase family

Probab=98.60  E-value=5.7e-07  Score=84.83  Aligned_cols=166  Identities=11%  Similarity=0.010  Sum_probs=100.3

Q ss_pred             ccccceEEehhHhhchhccchhhh----hcccCCcch---HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLG----FQCLQICRF---VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA----~e~~GV~PD---i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|+||+++++...|....    ....+....   ++|.++ +| .++|++++++ ++.+.+..  .      ..
T Consensus       162 ~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~--~------~~  232 (350)
T cd00609         162 KKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKK--L------LP  232 (350)
T ss_pred             HhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHH--H------HH
Confidence            467999999999999877665431    111121111   569998 77 4899999999 78887764  1      11


Q ss_pred             chhhhcc-H---HHHHHHHhh--HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          76 KLKISDT-V---RPHVQIKKS--VLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        76 g~T~agn-l---A~aaala~~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      ..++..+ .   +...+++..  .+++ .+++.+..+++.+.|++.    +... .....|.+..+.+...         
T Consensus       233 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~g~~~~~~~~~~---------  299 (350)
T cd00609         233 YTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL----GPLVVVKPSGGFFLWLDLPEG---------  299 (350)
T ss_pred             hcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCccEEEEEecCCC---------
Confidence            1223333 2   222333331  1222 344555556666655543    3221 3445577777776431         


Q ss_pred             HHHHHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+.+.+.++|+.+.+++.    .++.+|+.|...     ++|++.+++++
T Consensus       300 ~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-----~~~i~~~~~al  348 (350)
T cd00609         300 DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-----EEELEEALERL  348 (350)
T ss_pred             ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-----HHHHHHHHHHh
Confidence            1234466777788999987531    367999998866     58999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=98.39  E-value=2.3e-06  Score=83.65  Aligned_cols=170  Identities=10%  Similarity=-0.074  Sum_probs=95.1

Q ss_pred             ccccceEEehhHhhc---hhccchhhhhcccCCcch-----HHHhh---cCCcccc-ceeeechhHHHhhhhhhhccC--
Q psy7882           5 YYRDCGVVVSAVDFG---SGDNGTYLGFQCLQICRF-----VQKDF---KGSFWDK-LIVHTSTCTFENFIKIKYQIL--   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTG---fGRTG~~fA~e~~GV~PD-----i~KaL---gGG~~Pi-gAv~~~~eI~d~~~~~~~~~~--   70 (329)
                      ..||+++|+|+++++   ++++|.      +  .+|     ..|.+   ++|. |. |.+.+++++.+.+.....+..  
T Consensus       186 ~~~g~~livD~~~~~~~~~~~~~~------~--~~d~~~~s~~K~~~p~g~Gg-p~~g~l~~~~~~~~~~~~~~~~~~~~  256 (398)
T cd00613         186 HSAGALVYVDGDNLNLTGLKPPGE------Y--GADIVVGNLQKTGVPHGGGG-PGAGFFAVKKELVRFLPGRLVGVTKD  256 (398)
T ss_pred             HhcCCEEEEEeccccccCCCChHH------c--CCCEEEeeccccCCCCCCCC-CceeEEEEhhhhHhhCCCCeeccccc
Confidence            467999999998753   333332      2  366     34654   4453 65 555566666665321000000  


Q ss_pred             -----------C--------CCccchhhhcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceee
Q psy7882          71 -----------K--------TPAHKLKISDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGD  123 (329)
Q Consensus        71 -----------~--------~~~hg~T~agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~  123 (329)
                                 .        -..++.+++++ +.++++... ..+     ++ .++..+++++|+++|+++.... ....
T Consensus       257 ~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~  335 (398)
T cd00613         257 AEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNG  335 (398)
T ss_pred             cCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCC
Confidence                       0        01234566666 555444433 222     22 5678889999999888753211 1111


Q ss_pred             EEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         124 VRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       124 VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      .+..  ...+.+...       .......+.+.|.++|+++.... ...+++|+.|++..   |++|||+++++
T Consensus       336 ~~~~--~v~~~~~~~-------~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~---t~edid~~~~~  397 (398)
T cd00613         336 PFFH--EFVLRLPPL-------YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETE---TKEELDALLEA  397 (398)
T ss_pred             CeeE--EEEEEcCCc-------chHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCC---CHHHHHHHHHh
Confidence            2221  123333210       01234568888999999875421 13579999999988   58999999976

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=98.36  E-value=5.2e-06  Score=81.29  Aligned_cols=158  Identities=11%  Similarity=0.037  Sum_probs=88.4

Q ss_pred             cccceEEehhHhh-c-hhccchhhhhcccCC---cch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           6 YRDCGVVVSAVDF-G-SGDNGTYLGFQCLQI---CRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         6 ~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV---~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+|++||+||+|+ | +|++|..++ ..++.   .+|   ++|++|+.   -+++++.+++.+.+..  ..  .+...  
T Consensus       171 ~~~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~~~~~tlsK~~g~~---G~~vl~~~~~~~~~~~--~~--~~~~~--  240 (370)
T PRK05937        171 KYHAHLIVDEAHAMGIFGDDGKGFC-HSLGYENFYAVLVTYSKALGSM---GAALLSSSEVKQDLML--NS--PPLRY--  240 (370)
T ss_pred             HcCCEEEEECCccccccCCCCCchH-HhhCCCCCcEEEEechhhhhcC---ceEEEcCHHHHHHHHH--hC--CCCee--
Confidence            5699999999998 5 777775432 23343   256   67998652   1445666776655442  00  11221  


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +.+.+ .++++..+. +.+++     .++++++.++|.+.|..           ++.|....+.+..          ...
T Consensus       241 s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~-----------~~~~~~~~i~~~~----------~~~  299 (370)
T PRK05937        241 STGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS-----------AAPGCVQPIFLPG----------ISE  299 (370)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC-----------CCCCCEEEEEeCC----------hhH
Confidence            22233 333333233 44432     23344444444443321           1223333444421          113


Q ss_pred             HHHHHHHHHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++... .+....+|+.+....   |++|||++++++
T Consensus       300 ~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~---t~edid~l~~~L  344 (370)
T PRK05937        300 QELYSKLVETGIRVGVVCFPTGPFLRVNLHAFN---TEDEVDILVSVL  344 (370)
T ss_pred             HHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCC---CHHHHHHHHHHH
Confidence            46788889999988742 223468999998776   689999999985

>PRK06225 aspartate aminotransferase; Provisional

Probab=98.35  E-value=1.1e-05  Score=78.84  Aligned_cols=166  Identities=8%  Similarity=-0.017  Sum_probs=97.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|.||++.+|.. +....   ..+.||       ++|.++ .| +.+|++++++++++.+..  .       +.
T Consensus       187 ~~~~~~ii~De~y~~~~~-~~~~~---~~~~~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~--~-------~~  252 (380)
T PRK06225        187 RDNDAFLLHDCTYRDFAR-EHTLA---AEYAPEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKS--I-------VI  252 (380)
T ss_pred             HHCCcEEEEehhHHHHhc-cCCch---hhcCCCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHH--H-------Hh
Confidence            357999999999987732 22111   123444       579997 67 589999999999887653  1       11


Q ss_pred             hhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCc--eeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          77 LKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAI--VGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~--v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      ++++.+ ++++++.+. +..++ ++++++.-+..++.+.+..++++.  +......|.++.++|....     .+   ..
T Consensus       253 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~---~~  324 (380)
T PRK06225        253 NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG-----ID---PE  324 (380)
T ss_pred             cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc-----CC---HH
Confidence            234445 444433322 11111 344544444444444444444332  2223445778888874311     11   34


Q ss_pred             HHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...|.++||.+.+..     ...+.+|+.  +..   +++|++++++++
T Consensus       325 ~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~---~~e~l~~~~~~l  370 (380)
T PRK06225        325 DLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSI---PREQVEVFCEEF  370 (380)
T ss_pred             HHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCC---CHHHHHHHHHHH
Confidence            57788889999988731     123577875  332   589999999975

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=98.31  E-value=8.4e-06  Score=81.32  Aligned_cols=166  Identities=13%  Similarity=0.015  Sum_probs=102.1

Q ss_pred             ccccccceEEehhHhhchhccc--hhhhhcccCCcch--------HHHhhcCCccccceeeechhHHHhhhhhhhccCCC
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNG--TYLGFQCLQICRF--------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT   72 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG--~~fA~e~~GV~PD--------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~   72 (329)
                      +-.+|++.|++||... +|-.|  ..+..+++|+.|+        ++|++|+-   =|.+.+++.+.|.+..        
T Consensus       196 L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~---Gg~v~g~~~~~d~L~~--------  263 (388)
T COG0156         196 LAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSS---GGYIAGSAALIDYLRN--------  263 (388)
T ss_pred             HHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCCCccceEEEEEchhhhccc---CceeeCcHHHHHHHHH--------
Confidence            4457889999999986 44444  2346788899876        57999843   2567778877776653        


Q ss_pred             Cccchhhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882          73 PAHKLKISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        73 ~~hg~T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p  144 (329)
                      ...+.-|+.+   ..+++++++ +++++    .++++++..+++..+...    +... ....-.++-+.+.+       
T Consensus       264 ~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~----~~~~-~~s~s~I~pv~~gd-------  331 (388)
T COG0156         264 RARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL----GLVL-LPSESPIIPVILGD-------  331 (388)
T ss_pred             hCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCcc-CCCCCCeeeeEeCC-------
Confidence            2333444444   333444555 66654    456666666666433322    1110 11112233344432       


Q ss_pred             CChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        +..+..+...|+++||++.+-.+     ....+|+.|..   .||++||+.+++++
T Consensus       332 --~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta---~ht~~~I~~l~~~l  384 (388)
T COG0156         332 --EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTA---AHTEEDIDRLAEAL  384 (388)
T ss_pred             --HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecC---CCCHHHHHHHHHHH
Confidence              35577788899999999976321     23568887754   45799999999875

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=98.25  E-value=1.3e-05  Score=77.52  Aligned_cols=170  Identities=12%  Similarity=-0.033  Sum_probs=94.7

Q ss_pred             ccccceEEehhHhhchh----ccchhhhhcccCCcch-H----HHhhcCCccccceeeech-hHHHhhhhhh-hc-cCCC
Q psy7882           5 YYRDCGVVVSAVDFGSG----DNGTYLGFQCLQICRF-V----QKDFKGSFWDKLIVHTST-CTFENFIKIK-YQ-ILKT   72 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfG----RTG~~fA~e~~GV~PD-i----~KaLgGG~~PigAv~~~~-eI~d~~~~~~-~~-~~~~   72 (329)
                      ..+|+++|+||+|+|+.    +.+..+.....+  .| +    -|.+.+| .|+|+++++. ++.+.+.... +. ....
T Consensus       178 ~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~--vd~~~~s~~K~~~a~-~~~G~~~~~~~~~~~~l~~~~~~~~~~~~  254 (371)
T PRK13520        178 LENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPG--VDSITIDPHKMGLAP-IPAGGILFRDESYLDALAVDTPYLTSKKQ  254 (371)
T ss_pred             HHcCCCEEEEecchhHHHHhhcCCCCccccCCC--CceEEECCccccCcc-CCceEEEEcCHHHHHhhcccCccccCCCC
Confidence            45799999999998763    111112222223  24 2    2654445 4898777644 4665543100 00 0001


Q ss_pred             Cccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          73 PAHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        73 ~~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      ..+++|.++.  .+..++++.   +-+++ .++..++.++|.+.|+++  ....+  +.....++.+.+..         
T Consensus       255 ~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~~v~~~~~~---------  321 (371)
T PRK13520        255 ATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER--GFEPV--IEPVLNIVAFDDPN---------  321 (371)
T ss_pred             cceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC--CCEEe--cCCCceEEEEecCC---------
Confidence            1233455444  333333332   11222 667788888888888764  22211  11123355555421         


Q ss_pred             hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+.+.|.++|+++..++ .++++|+.++...   |++||+.+++++
T Consensus       322 ---~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~---t~edi~~~~~~l  365 (371)
T PRK13520        322 ---PDEVREKLRERGWRVSVTR-CPEALRIVCMPHV---TREHIENFLEDL  365 (371)
T ss_pred             ---HHHHHHHHHHCCceeccCC-CCCEEEEEEECCC---CHHHHHHHHHHH
Confidence               3468888999999998764 3678999654433   689999999985

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=98.10  E-value=6.7e-05  Score=73.49  Aligned_cols=160  Identities=8%  Similarity=0.021  Sum_probs=98.0

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +++++|.||+...|+..|......  ...|+      ++|.++ .| +.+|.+++++++++.+..  ..        .++
T Consensus       186 ~~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~--~~--------~~~  252 (369)
T PRK08153        186 ETTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAG-ARVGYAIGAPGTIKAFDK--VR--------NHF  252 (369)
T ss_pred             CCcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcc-hheeeeecCHHHHHHHHH--hh--------cCC
Confidence            489999999999886544322111  12233      679998 78 499999999999987763  11        123


Q ss_pred             hcc-HHHHH---HHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHV---QIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aa---ala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +.+ ++.++   +++. +.   +++.++..+..++.+.+..++++.. .+-..|.++-+.+..+        ...+..+.
T Consensus       253 ~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~~--------~~~a~~l~  320 (369)
T PRK08153        253 GMNRIAQAAALAALKDQAY---LAEVVGKIAAARDRIAAIARANGLT-PLPSATNFVAIDCGRD--------GAFARAVL  320 (369)
T ss_pred             CCCHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCCC--------cccHHHHH
Confidence            334 33333   2322 22   4456666666666666655555531 2233455555554311        12456788


Q ss_pred             HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++|.++||+++..+.  ..+.+|+.-    .  +++|++.+++++
T Consensus       321 ~~l~~~Gi~v~~p~~~~~~~~iRis~----~--~~~~~~~~~~al  359 (369)
T PRK08153        321 DGLIARDIFVRMPGVAPLDRCIRVSC----G--PDEELDLFAEAL  359 (369)
T ss_pred             HHHHHCCeEEeeCCCCCCCCeEEEec----C--CHHHHHHHHHHH
Confidence            999999999964331  235677652    2  589999999985

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=98.08  E-value=8e-05  Score=72.26  Aligned_cols=161  Identities=11%  Similarity=0.038  Sum_probs=93.9

Q ss_pred             ccceEEehhHhhchhccch-hhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      +++++|.||+...+...+. ..+....+..++      ++|.++ .| +.+|.+++++++.+.+..  ..        .+
T Consensus       185 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~--~~--------~~  253 (367)
T PRK02731        185 PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNR--VR--------QP  253 (367)
T ss_pred             CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHH--cc--------CC
Confidence            4899999999887754332 122222333344      579986 67 499999999998887763  11        11


Q ss_pred             hhcc-HHH---HHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          79 ISDT-VRP---HVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        79 ~agn-lA~---aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      +..+ ++.   .++++. +.+   +++.+.-...++.+.+..++++.. .....|.++.+.+....         -...+
T Consensus       254 ~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~g~~~~i~~~~~~---------~~~~~  320 (367)
T PRK02731        254 FNVNSLALAAAVAALDDDAFV---EKSRALNAEGMAWLTEFLAELGLE-YIPSVGNFILVDFDDGK---------DAAEA  320 (367)
T ss_pred             CCCCHHHHHHHHHHhCCHHHH---HHHHHHHHHHHHHHHHHHHHCCCc-cCCCCceEEEEECCCCC---------CHHHH
Confidence            2223 332   233333 333   333333333344444444444432 12345778888773211         13457


Q ss_pred             HHHHHHCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|.++||++.+....  .+.+|+...      +.+|++.+++++
T Consensus       321 ~~~L~~~gI~v~~~~~~~~~~~iRis~~------~~~e~~~l~~aL  360 (367)
T PRK02731        321 YQALLKRGVIVRPVAGYGLPNALRITIG------TEEENRRFLAAL  360 (367)
T ss_pred             HHHHHHCCEEEEeCCCCCCCCeEEEecC------CHHHHHHHHHHH
Confidence            88888999999885422  367888752      578999999875

>KOG1359|consensus

Probab=98.05  E-value=4.1e-05  Score=73.51  Aligned_cols=169  Identities=8%  Similarity=-0.012  Sum_probs=99.6

Q ss_pred             cccccceEEehhHh-hch-hccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           4 TYYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         4 ~~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..++|+|+.+||-. ||| |-||. +.-|.+||.-|       ++|++||-  -=|-+.++.++.+.+..    ..+++.
T Consensus       219 a~kYgaLlfiDecHaTgf~G~tGr-Gt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrq----r~Rpyl  291 (417)
T KOG1359|consen  219 AKKYGALLFIDECHATGFFGETGR-GTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQ----RSRPYL  291 (417)
T ss_pred             HHhcCcEEEEeecccceeecCCCC-ChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHh----cCCcee
Confidence            34689999999985 554 55665 45688897554       68999842  12335677777766653    223455


Q ss_pred             cchhhhcc-HHHHHHHHhhHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHH
Q psy7882          75 HKLKISDT-VRPHVQIKKSVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        75 hg~T~agn-lA~aaala~~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .+.+..-+ ++|++..-.-++..   +.+.+..-+++++.++.-    +  ..|.|. -.++-+-+.         +...
T Consensus       292 FSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a----G--ftIsg~~hPI~pv~lG---------da~l  356 (417)
T KOG1359|consen  292 FSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA----G--FTISGASHPICPVMLG---------DARL  356 (417)
T ss_pred             ecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc----C--ceecCCCCCccceecc---------cHHH
Confidence            55555544 55544321111211   455666677777665532    1  112221 122333332         2467


Q ss_pred             HHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.++.++|+++|+++..-.     ++...||+.   ++..||++|||++++++
T Consensus       357 A~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVq---iSAaHt~edid~~i~Af  406 (417)
T KOG1359|consen  357 ASKMADELLKRGIYVIGFSYPVVPKGKARIRVQ---ISAAHTEEDIDRLIEAF  406 (417)
T ss_pred             HHHHHHHHHhcCceEEeecCCcCCCCceEEEEE---EehhcCHHHHHHHHHHH
Confidence            8889999999999986321     123344442   45678999999999985

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=98.03  E-value=0.00012  Score=69.86  Aligned_cols=167  Identities=13%  Similarity=0.014  Sum_probs=92.8

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCC---cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQI---CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV---~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|+||++. +|..+..+ +...+.+   .+|     ++|.++.   +.|.+++++++++.+...  .  ..+..
T Consensus       159 ~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~--~--~~~~~  230 (349)
T cd06454         159 KKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSY--A--RGFIF  230 (349)
T ss_pred             HHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHh--c--hhhhc
Confidence            35799999999985 33332111 1112222   234     4598864   446677888888776531  0  01111


Q ss_pred             chhhhcc-HHHHHHHHh-hHH---hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVL---ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~il---e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                        +.+.+ ..++++.+. +.+   ++ .+++.++.+++.+.|+++  ..+.+..  +.+.+..+ +..+        ...
T Consensus       231 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~~--~~~~~~~~-~~~~--------~~~  295 (349)
T cd06454         231 --STSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL--GFPVGGS--PSHIIPPL-IGDD--------PAK  295 (349)
T ss_pred             --cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCcccCC--CCCcEEEE-eCCC--------hHH
Confidence              11223 333333333 322   22 567777888888877664  2222111  11222222 2111        122


Q ss_pred             HHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++.+.|.++||.+.+.+.     .++.+|+.|+...   +++|++++++++
T Consensus       296 ~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  345 (349)
T cd06454         296 AVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAH---TKEDIDRLLEAL  345 (349)
T ss_pred             HHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCC---CHHHHHHHHHHH
Confidence            45688889999999876321     2478999998766   579999999875

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=98.02  E-value=0.00011  Score=70.60  Aligned_cols=157  Identities=12%  Similarity=0.055  Sum_probs=92.0

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +++++|+||++.++...+....  ...-.|+      ++|.++ .| +.+|.+++++++.+.+..  ..        .++
T Consensus       173 ~~~~ii~D~~y~~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~--~~--------~~~  239 (346)
T TIGR01141       173 EDALVVVDEAYGEFSGEPSTLP--LLAEYPNLIVLRTLSKAFGLAG-LRIGYAIANAEIIDALNK--VR--------APF  239 (346)
T ss_pred             CCcEEEEECchhhhcCCccHHH--HHhhCCCEEEEehhhHhhhchh-hhceeeecCHHHHHHHHh--cc--------CCC
Confidence            5899999999997754322211  1111234      579995 56 489999999998887653  11        112


Q ss_pred             hcc-HHHH---HHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          80 SDT-VRPH---VQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        80 agn-lA~a---aala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      +.+ .++.   +++.. +.+++ .+++++.-+++.+.|++    ++.+.-+...|.++.+++..           -..++
T Consensus       240 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g~~~~~~~~~-----------~~~~~  304 (346)
T TIGR01141       240 NLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK----LPGLEVYPSDANFVLIRFPR-----------DADAL  304 (346)
T ss_pred             CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEECCCcCCEEEEecCC-----------CHHHH
Confidence            223 3332   23333 32332 34445555555555543    33222222346777777642           13457


Q ss_pred             HHHHHHCCceeeccCCC---CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLS---GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~---~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...|.++||++.+....   .+.+|+...      +++|++++++++
T Consensus       305 ~~~L~~~gI~v~~g~~f~~~~~~iRls~~------~~~~i~~~~~~l  345 (346)
T TIGR01141       305 FEALLEKGIIVRDLNSYPGLPNCLRITVG------TREENDRFLAAL  345 (346)
T ss_pred             HHHHHHCCeEEEeCCCcCCCCCeEEEecC------CHHHHHHHHHHh
Confidence            88889999999875321   578888743      578999998763

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=97.96  E-value=8.5e-05  Score=70.72  Aligned_cols=164  Identities=10%  Similarity=-0.005  Sum_probs=90.3

Q ss_pred             ccccceEEehhHhhchh--ccchhhhhcccCCcch-----HHHhhcCCcccccee-eechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSG--DNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIV-HTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfG--RTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv-~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .++|+++|+||.+.-+.  -.|.  ....+...+|     +.|.++.   |.|++ ++++++.+.+..  ..    ..++
T Consensus       156 ~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~--~~----~~~~  224 (338)
T cd06502         156 KENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA---PVGAVVVGNRDFIARARR--RR----KQAG  224 (338)
T ss_pred             HHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC---ccceEEECCHHHHHHHHH--HH----HHhC
Confidence            35789999999763111  1121  1112223456     4588752   55554 568888877653  10    1123


Q ss_pred             hhhhcc-HHHHHHHHh----hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          77 LKISDT-VRPHVQIKK----SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        77 ~T~agn-lA~aaala~----~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .+++.+ ++++++++.    ...+..++..++.+++.+.|+++    +.. -....+-+..+.+...        .....
T Consensus       225 ~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~v~~~~~--------~~~~~  291 (338)
T cd06502         225 GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GGL-ESEVQTNIVLLDPVEA--------NAVFV  291 (338)
T ss_pred             CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CCC-cccccCCeEEEecCCc--------cHHHH
Confidence            344433 443444332    12222567777778888888764    221 0011222333333210        12333


Q ss_pred             HHHHHHH---HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCK---EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~---e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...+.   ++|+++.+.+  .+.+|+.|++.+   +++|+++++++.
T Consensus       292 ~l~~~l~~~~~~gi~~~~~~--~~~lRi~~~~~~---~~~~i~~~~~~l  335 (338)
T cd06502         292 ELSKEAIERRGEGVLFYAWG--EGGVRFVTHWDT---TEEDVDELLSAL  335 (338)
T ss_pred             HHHHHHHHhhhCCEEEEecC--CCeEEEEeecCC---CHHHHHHHHHHH
Confidence            4444443   7899998764  389999999988   579999999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR01814 kynureninase kynureninase

Probab=97.92  E-value=0.00018  Score=71.29  Aligned_cols=172  Identities=6%  Similarity=-0.053  Sum_probs=89.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhc---cCC--CCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ---ILK--TPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~---~~~--~~~hg   76 (329)
                      ..+|+++|+|++|+. |..  -+..+.+|+...   ..|.|.||. . +++..+++..+.+.+...+   ...  .+.+.
T Consensus       198 ~~~g~~~~vD~aq~~-G~~--~id~~~~gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~  272 (406)
T TIGR01814       198 HAKGALVGFDLAHAV-GNV--PLDLHDWGVDFACWCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMD  272 (406)
T ss_pred             HHcCCEEEEEccccc-CCc--ccccccCCCCEEEEcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccc
Confidence            357999999999994 433  123344454333   239998873 3 4444444333222210000   000  00000


Q ss_pred             hh----------hhcc-HHHHHHHHh-hHHhH------HHHHHHHHHHHHHHHHHHHHhCC---ce--eeEEeeceeeEE
Q psy7882          77 LK----------ISDT-VRPHVQIKK-SVLER------FVHTYVVGNFLLTHLSKLREEFA---IV--GDVRGKGLMIGV  133 (329)
Q Consensus        77 ~T----------~agn-lA~aaala~-~ile~------le~v~~lG~~L~~gL~eL~~~~p---~v--~~VRG~GLm~gI  133 (329)
                      .+          .+-| .++++..+. +++++      .++.+.+.+++++.|+++....+   .+  .+.+.++.++++
T Consensus       273 ~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~  352 (406)
T TIGR01814       273 NTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSL  352 (406)
T ss_pred             cccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEE
Confidence            01          1123 233322223 44433      44556666666666655311011   11  122334556677


Q ss_pred             EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      .+. ..          ...+.+.|.++||++...  .+..||+.| ++..   |++|||++++++
T Consensus       353 ~~~-~~----------~~~~~~~L~~~gi~v~~~--~~~~iRiS~~~~~n---t~~did~l~~~l  401 (406)
T TIGR01814       353 THP-VP----------GKAVFQALIKRGVIGDKR--EPSVIRVAPVPLYN---TFVDVYDAVNVL  401 (406)
T ss_pred             Eec-CC----------HHHHHHHHHHCCEEEecc--CCCeEEEechhccC---CHHHHHHHHHHH
Confidence            653 11          245778888999987643  247999999 6665   579999999985

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=97.90  E-value=0.00025  Score=68.34  Aligned_cols=161  Identities=11%  Similarity=-0.015  Sum_probs=90.1

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .||+++|+||+..+|.........  .+-.++      ++|.++ .| +.+|.+++++++++.+..  ..   .....++
T Consensus       156 ~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--~~---~~~~~s~  227 (330)
T TIGR01140       156 ARGGWLVVDEAFIDFTPDASLAPQ--AARFPGLVVLRSLTKFFGLAG-LRLGFVVAHPALLARLRE--AL---GPWTVNG  227 (330)
T ss_pred             hcCCEEEEECcccccCCccchhhH--hccCCCEEEEEecchhhcCch-hhhhheeCCHHHHHHHHh--cC---CCCCchH
Confidence            469999999999888543222211  111122      579998 77 489999999999888764  11   0111111


Q ss_pred             hhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC  157 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l  157 (329)
                      .+. .++...+.. +..   +++++.-+..++.+.+..++++.+.-..+.|++..+.+..            ...+.+.|
T Consensus       228 ~~q-~~~~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~------------~~~l~~~l  291 (330)
T TIGR01140       228 PAR-AAGRAALADTAWQ---AATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD------------AAALHEAL  291 (330)
T ss_pred             HHH-HHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC------------HHHHHHHH
Confidence            110 222233333 332   2334444444555555445556433233456666666531            23588999


Q ss_pred             HHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         158 KEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       158 ~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      .++||++.+...    ..+.+|+...  .   ..++ +.++++
T Consensus       292 ~~~gi~v~pg~~f~~~~~~~iRi~~~--~---~~~~-~~~~~~  328 (330)
T TIGR01140       292 ARRGILIRDFDNFPGLDPRYLRFALP--T---DEEN-DRLEEA  328 (330)
T ss_pred             HHCCEEEEECCCCCCCCCCEEEEEec--C---HHHH-HHHHHh
Confidence            999999988532    2367888542  1   2244 776655

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=97.89  E-value=0.00023  Score=68.03  Aligned_cols=171  Identities=12%  Similarity=0.041  Sum_probs=97.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH----   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h----   75 (329)
                      ..||+++|+|++++ +|..  .+....+  ..|     ..|.++|+- -+|.+.+++++.+.+... .   .++.+    
T Consensus       152 ~~~~~~livD~~~s-~g~~--~~~~~~~--~~d~~~~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~-~---~~~~~~~~~  221 (355)
T TIGR03301       152 RSHGAVLIVDAMSS-FGAI--PIDIEEL--DVDALIASANKCLEGVP-GFGFVIARRDLLEASAGN-A---RSLYLDLYD  221 (355)
T ss_pred             HHcCCEEEEEeccc-cCCc--ccchhhc--CccEEEecCCcccccCC-ceeEEEECHHHHHHhhCC-C---CCceeeHHH
Confidence            46799999999876 5422  2222333  345     359987652 368999999988776420 0   00000    


Q ss_pred             ---------chhhhcc-HHHH---HHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEee
Q psy7882          76 ---------KLKISDT-VRPH---VQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLV  136 (329)
Q Consensus        76 ---------g~T~agn-lA~a---aala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~  136 (329)
                               ...|+.+ .++.   ++++.    ..+++ .++.++..+++.+.|+++  ....+. ..+..|+++.+.+.
T Consensus       222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~--g~~~~~~~~~~~~~~~~~~~~  299 (355)
T TIGR03301       222 QWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL--GFQPLLPERWQSPIIVSFLYP  299 (355)
T ss_pred             HHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc--CCeeecCCCCCCCcEEEEECC
Confidence                     0112233 2222   22221    11222 456677777777777654  122221 12344556666653


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....       .....+.+.|.++||++.+++. ..+.+|+.+...+   +++|++++++++
T Consensus       300 ~~~~-------~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~---~~~~i~~~~~~l  351 (355)
T TIGR03301       300 DDPD-------FDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEI---DAADIERLLEAI  351 (355)
T ss_pred             CCCc-------chHHHHHHHHHHCCEEEECCccccccEEEEecCCCC---CHHHHHHHHHHH
Confidence            2110       1235688899999999987531 2368999986555   589999999975

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK06108 aspartate aminotransferase; Provisional

Probab=97.79  E-value=0.00053  Score=66.70  Aligned_cols=165  Identities=11%  Similarity=-0.026  Sum_probs=92.5

Q ss_pred             ccccceEEehhHhhchhcc-chhhhhcccCC-cc-h-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDN-GTYLGFQCLQI-CR-F-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRT-G~~fA~e~~GV-~P-D-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|+++|.||+..++... +... .....+ .+ |       ++|.++ .| +.+|.+++++++.+.+..  .      
T Consensus       188 ~~~~~~li~De~y~~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~--~------  257 (382)
T PRK06108        188 RRHGLWIVADEVYERLYYAPGGRA-PSFLDIAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEK--L------  257 (382)
T ss_pred             HHCCcEEEEehhhhhhccCCCCCC-CCHhhcCCCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHH--H------
Confidence            3579999999999988442 1111 011122 11 2       679986 56 599999999998887653  1      


Q ss_pred             ccchhhhcc-H---HHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCC
Q psy7882          74 AHKLKISDT-V---RPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        74 ~hg~T~agn-l---A~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~  145 (329)
                      ...++++.+ +   ++..++..  +.+++ .+++++.-+++.+.|+++    +.+.-+... |+++.+.+....      
T Consensus       258 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p~~g~~~~~~l~~~~------  327 (382)
T PRK06108        258 IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL----PGVEVAKPDGAMYAFFRIPGVT------  327 (382)
T ss_pred             HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccCCCeeEEEEEeCCCCC------
Confidence            111122233 3   33334433  23333 445555555565555543    322222233 444455653210      


Q ss_pred             ChHHHHHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ....+...++ ++||++.+..    ...+.+|+....     +++++++.++.+
T Consensus       328 ---~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-----~~~~l~~~l~~l  376 (382)
T PRK06108        328 ---DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-----DPARLDEAVERL  376 (382)
T ss_pred             ---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-----CHHHHHHHHHHH
Confidence               1245777765 5899997742    124689987654     478899888864

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=97.71  E-value=0.00067  Score=65.72  Aligned_cols=159  Identities=10%  Similarity=0.048  Sum_probs=92.1

Q ss_pred             ccceEEehhHhhchhccchh-hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      +|+++|.||+...|-.-+.. .......-.+.      ++|.++ .| +.+|.+++++++.+.+..  ..        .+
T Consensus       182 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~--~~--------~~  250 (359)
T PRK03158        182 SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAA-LRVGYGIASEELIEKLNI--AR--------PP  250 (359)
T ss_pred             CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcc-hhhehhcCCHHHHHHHHH--hc--------CC
Confidence            58999999998776322110 01111111111      679998 67 599999999999887763  11        12


Q ss_pred             hhcc-HHHHHH---HHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          79 ISDT-VRPHVQ---IKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        79 ~agn-lA~aaa---la~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      ++.+ ++..++   ++. +.   ++++.+.-...++.+.+..++++. ..+.+.|.++.+.+..+           ...+
T Consensus       251 ~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~g~~i~~~~~~~-----------~~~~  315 (359)
T PRK03158        251 FNTTRIAQYAAIAALEDQAF---LKECVEKNAEGLEQYYAFCKEYGL-FYYPSQTNFIFVDTGRD-----------ANEL  315 (359)
T ss_pred             CCCCHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHHHHCCC-eeCCCcCcEEEEECCCC-----------HHHH
Confidence            3344 444333   333 33   333444444444445444445542 22445577777766310           2457


Q ss_pred             HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|.++||++.++..  .++.+||.    +.  +.+|.+.++++.
T Consensus       316 ~~~l~~~gv~v~~g~~f~~~~~iRi~----~~--~~~~~~~l~~al  355 (359)
T PRK03158        316 FEALLKKGYIVRSGAALGFPTGVRIT----IG--LKEQNDKIIELL  355 (359)
T ss_pred             HHHHHHCCeEEeeCCCCCCCCeEEEe----cC--CHHHHHHHHHHH
Confidence            7888899999988421  24678875    22  578999999875

>PLN02721 threonine aldolase

Probab=97.70  E-value=0.00058  Score=65.37  Aligned_cols=162  Identities=11%  Similarity=0.077  Sum_probs=88.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCc-------ch-----HHHhhcCCccccce-eeechhHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-------RF-----VQKDFKGSFWDKLI-VHTSTCTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-------PD-----i~KaLgGG~~PigA-v~~~~eI~d~~~~~~~~~~~   71 (329)
                      ..+|+++|+||.+. ++-..      ..++.       .|     ++|++++   |+|+ +++++++.+.+.....    
T Consensus       168 ~~~g~~livD~a~~-~~~~~------~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~----  233 (353)
T PLN02721        168 KRHGLKLHIDGARI-FNASV------ALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRK----  233 (353)
T ss_pred             HHcCCEEEEEchhh-hcchh------hhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHH----
Confidence            45799999999875 32110      11222       23     4698863   6775 5677887776542000    


Q ss_pred             CCccchhhhccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCcee-eE-EeeceeeEEEeecCCCCCCCCCh
Q psy7882          72 TPAHKLKISDTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVG-DV-RGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        72 ~~~hg~T~agnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~-~V-RG~GLm~gIef~~d~~~~~p~~~  147 (329)
                       ..+++.......+++++..  +.++++++..++.+++.+.|+++    +.+. .+ ...+.++.+.+....    +   
T Consensus       234 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~----~---  301 (353)
T PLN02721        234 -TLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQI----KGLRVNVAAVETNIVYFDITDGS----R---  301 (353)
T ss_pred             -hcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEecCCccceEEEEEccCCc----c---
Confidence             0111111111122222222  22222344455566666666543    2221 11 122445666663210    0   


Q ss_pred             HHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+.+.|.++||.+.+.+  .+.+|+.+.+..   +++|++++++++
T Consensus       302 ~~~~~~~~~L~~~gi~v~~~~--~~~lR~~~~~~~---~~~~i~~~~~~l  346 (353)
T PLN02721        302 ITAEKLCKSLEEHGVLLMPGN--SSRIRVVTHHQI---SDSDVQYTLSCF  346 (353)
T ss_pred             ccHHHHHHHHHhCCcEEecCC--CceEEEEecCcC---CHHHHHHHHHHH
Confidence            113568888899999999853  578999987665   589999999985

>PRK07324 transaminase; Validated

Probab=97.69  E-value=0.0011  Score=65.18  Aligned_cols=170  Identities=13%  Similarity=-0.029  Sum_probs=92.0

Q ss_pred             ccccceEEehhHhhchhccchhhhh-ccc--CCcch-HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCL--QICRF-VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~--GV~PD-i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      .+||+++|.||+..++...+..... +.+  +|.-. ++|.++ .| +-+|.+++++++.+.+..        ..+.+++
T Consensus       183 ~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~--------~~~~~~~  253 (373)
T PRK07324        183 RSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPG-IRVGWIAANEEVIDILRK--------YRDYTMI  253 (373)
T ss_pred             HHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCcc-ceeEEEecCHHHHHHHHH--------HhCcEEe
Confidence            3579999999999887554322111 111  12223 789998 66 489999999888887764        1122233


Q ss_pred             hcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeecee-eEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLM-IGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        80 agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm-~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +.+ ++..++... +..++ +++.++.-+.-++.+.+..++++.+..++..|.+ .-+.+..+.         -...+..
T Consensus       254 ~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~---------~~~~~~~  324 (373)
T PRK07324        254 CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM---------PSEDFCL  324 (373)
T ss_pred             cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC---------CHHHHHH
Confidence            333 333222221 11111 3333333333334444444455555455555543 333342110         1234666


Q ss_pred             HHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+ ++||++.|+..  ..+.+|+.  +..   +++.+.+.++..
T Consensus       325 ~ll~~~gv~v~pg~~F~~~~~iRis--~~~---~~~~l~~~l~rl  364 (373)
T PRK07324        325 KLLKETGVLLVPGNRFDLEGHVRIG--YCC---DTETLKKGLKKL  364 (373)
T ss_pred             HHHHhcCEEEECccccCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            665 67999998532  24678875  332   478888888764

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=97.68  E-value=0.001  Score=64.10  Aligned_cols=172  Identities=12%  Similarity=-0.005  Sum_probs=93.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCC-------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT-------   72 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~-------   72 (329)
                      ..+|+++|+|+++. +|..  .+....++  +|     ..|.++++. .+|++.++++.++.+.. .......       
T Consensus       151 ~~~~~~li~D~~~~-~g~~--~~~~~~~~--~d~~~~s~~K~l~~p~-g~G~l~~~~~~~~~~~~-~~~~~~~~~~~~~~  223 (356)
T cd06451         151 KKHDALLIVDAVSS-LGGE--PFRMDEWG--VDVAYTGSQKALGAPP-GLGPIAFSERALERIKK-KTKPKGFYFDLLLL  223 (356)
T ss_pred             HhcCCEEEEeeehh-ccCc--cccccccC--ccEEEecCchhccCCC-CcceeEECHHHHHHHHh-cCCCCceeecHHHH
Confidence            35799999999876 5432  22222233  46     349999864 68999999988766541 0000000       


Q ss_pred             --C-----ccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecC
Q psy7882          73 --P-----AHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQD  138 (329)
Q Consensus        73 --~-----~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d  138 (329)
                        +     ...+|.+-.  .+..++++.   .-+++ .++..++.+++.+.|+++  .......-.+.+ .+..+.+.. 
T Consensus       224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~-  300 (356)
T cd06451         224 LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL--GLKLLAKPELRSPTVTAVLVPE-  300 (356)
T ss_pred             HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCCCceEEEECCC-
Confidence              0     011111111  122222222   11222 556677777777777764  222222112222 222233321 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .        .....+.+.|.++ ||.+.+..  ..++.+|+.|....   +++|++++++++
T Consensus       301 ~--------~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~---~~e~v~~~~~~l  351 (356)
T cd06451         301 G--------VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEA---TREDVLGVLSAL  351 (356)
T ss_pred             C--------CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCC---CHHHHHHHHHHH
Confidence            1        0135688899998 99987632  13578999997765   689999999985

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=97.55  E-value=0.0025  Score=61.73  Aligned_cols=170  Identities=12%  Similarity=0.019  Sum_probs=92.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHHhhhhhhhcc---CC-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQI---LK-----   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~---~~-----   71 (329)
                      ..+|+++|.|+.++ +|..    ........+|   ++  |.+++  ..+|++++++++.+.+.+...+.   ..     
T Consensus       166 ~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  238 (373)
T cd06453         166 HEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEE  238 (373)
T ss_pred             HHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccc
Confidence            46899999999886 3332    1111123467   23  99876  35788889988876654200000   00     


Q ss_pred             --------CCccchhhhc-c-HHHHHHHHh-h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec
Q psy7882          72 --------TPAHKLKISD-T-VRPHVQIKK-S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ  137 (329)
Q Consensus        72 --------~~~hg~T~ag-n-lA~aaala~-~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~  137 (329)
                              .+. ++|... + ++..++++. +  -+++ .++.+++.+++.+.|+++- ....+.+....+.++.|.+..
T Consensus       239 ~~~~~~~~~~~-~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~  316 (373)
T cd06453         239 TTYADLPHKFE-AGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP-GVRVYGDAEDRAGVVSFNLEG  316 (373)
T ss_pred             cccCCCccccC-CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC-CeEEeCCccccCCeEEEEECC
Confidence                    000 111111 1 333333332 1  1122 4455566666666665431 111222223346677777632


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         138 DKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                       .         ....+.+.|.++||.+.+...          .++.+|+.+....   |++|+|+++++
T Consensus       317 -~---------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~---t~~di~~~~~~  372 (373)
T cd06453         317 -I---------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYN---TEEEIDALVEA  372 (373)
T ss_pred             -c---------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCC---CHHHHHHHHhh
Confidence             1         134688888999998864221          1468999998776   68999999876

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=97.49  E-value=0.0017  Score=62.11  Aligned_cols=147  Identities=10%  Similarity=0.024  Sum_probs=77.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcCCccccceeeec-hhHHHhhhhhhhccCC-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTS-TCTFENFIKIKYQILK-----   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~-----   71 (329)
                      ..+|+++|.|++|+ +|...   .-...|...|   ++    |.+++|  +.|+++++ +++.+.+.........     
T Consensus       130 ~~~~i~li~D~a~~-~g~~~---~~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (352)
T cd00616         130 KRHGLPVIEDAAQA-LGATY---KGRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFK  203 (352)
T ss_pred             HHcCCeEEEECCCC-CCCeE---CCEEcccCcceeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCc
Confidence            35799999999998 33221   1112333345   33    999655  45667665 4666654320011000     


Q ss_pred             --CCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---EeeceeeEEEeecCCCCCC
Q psy7882          72 --TPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---RGKGLMIGVDLVQDKETKV  143 (329)
Q Consensus        72 --~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---RG~GLm~gIef~~d~~~~~  143 (329)
                        ....+.++... +.++.++.. +.+++ .++.+++.+++++.|+++. ....+...   .....++.+.+.....   
T Consensus       204 ~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---  279 (352)
T cd00616         204 YEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPEAG---  279 (352)
T ss_pred             cccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCcCC---
Confidence              01122334444 566666554 44444 6677888888888887641 11111111   1233456666532100   


Q ss_pred             CCChHHHHHHHHHHHHCCceee
Q psy7882         144 PLNSRHMTHILDSCKEHGLLLG  165 (329)
Q Consensus       144 p~~~~~~~~~~~~l~e~GVLl~  165 (329)
                          .....+.+.|.++||.+.
T Consensus       280 ----~~~~~v~~~L~~~gI~~~  297 (352)
T cd00616         280 ----ESRDELIEALKEAGIETR  297 (352)
T ss_pred             ----CCHHHHHHHHHHCCCCee
Confidence                124568888889999765

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK03321 putative aminotransferase; Provisional

Probab=97.49  E-value=0.0015  Score=63.12  Aligned_cols=156  Identities=10%  Similarity=0.023  Sum_probs=89.1

Q ss_pred             ccceEEehhHhhchhccchh-hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      +++++|.||+...|...+.. .+.+...-.|+      ++|.++ .| +-+|.+++++++++.+..  .        ..+
T Consensus       176 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~--~--------~~~  244 (352)
T PRK03321        176 ADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRK--V--------AVP  244 (352)
T ss_pred             CCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHH--h--------cCC
Confidence            58999999999887554321 11222222344      579997 67 488999999999988764  1        112


Q ss_pred             hhcc-HHHHH---HHHh-hHH-hHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          79 ISDT-VRPHV---QIKK-SVL-ERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        79 ~agn-lA~aa---ala~-~il-e~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++.+ ++..+   ++.. +.+ ++..++.+.-+.+.+.|+    .++.. .....|.++.+.+..           ....
T Consensus       245 ~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~----~~~~~-~~~~~g~~i~i~l~~-----------~~~~  308 (352)
T PRK03321        245 FSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALR----AAGWT-VPPSQANFVWLPLGE-----------RTAD  308 (352)
T ss_pred             CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH----HCCCc-cCCCCCCEEEEeCCC-----------CHHH
Confidence            2333 33332   3322 222 112222222223333333    33321 122347777666531           0345


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||++.+.+  .+.+|+..      .+.++.++++++.
T Consensus       309 ~~~~l~~~gI~v~~~~--~~~iRi~~------~~~~~~~~~~~al  345 (352)
T PRK03321        309 FAAAAAEAGVVVRPFA--GEGVRVTI------GAPEENDAFLRAA  345 (352)
T ss_pred             HHHHHHHCCEEEEccC--CCcEEEee------CCHHHHHHHHHHH
Confidence            7888899999998864  34588873      2578999999875

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=97.47  E-value=0.0026  Score=61.59  Aligned_cols=81  Identities=11%  Similarity=0.069  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEE
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTA  176 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl  176 (329)
                      .++..++.++|+++|+++  .+..+.  .....++.+.+..            ...+.+.|.++|+++..+. .++.+|+
T Consensus       290 ~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~v~~~~~~------------~~~v~~~L~~~gi~v~~~~-~~~~iRi  352 (373)
T TIGR03812       290 VAECMENTRYLVEELKKI--GFEPVI--EPVLNIVAFEVDD------------PEEVRKKLRDRGWYVSVTR-CPKALRI  352 (373)
T ss_pred             HHHHHHHHHHHHHHHHhC--CCeEEc--CCCceEEEEEeCC------------HHHHHHHHHHCCceeccCC-CCCEEEE
Confidence            567778888888888765  222121  1122223333210            1358888999999997753 3678999


Q ss_pred             eCccccCcCCHHHHHHHHhcc
Q psy7882         177 LQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       177 ~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+....   |++|+|++++++
T Consensus       353 s~~~~~---t~edid~l~~~L  370 (373)
T TIGR03812       353 VVMPHV---TREHIEEFLEDL  370 (373)
T ss_pred             EEECCC---CHHHHHHHHHHH
Confidence            887654   689999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK07682 hypothetical protein; Validated

Probab=97.43  E-value=0.0021  Score=62.70  Aligned_cols=166  Identities=10%  Similarity=0.043  Sum_probs=90.9

Q ss_pred             ccccceEEehhHhhchhccchhhhh-cccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..||+++|.||+...|...+...+. ...+..+.      ++|.++ .| +.+|.+++++++.+.+..  ..      ..
T Consensus       184 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~--~~------~~  254 (378)
T PRK07682        184 EKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLK--IH------QY  254 (378)
T ss_pred             HHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHH--HH------Hh
Confidence            3579999999999988665432211 11222222      579997 67 489999999999887763  11      01


Q ss_pred             hhhhcc----HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT----VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn----lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~  148 (329)
                      ++++.+    .+++++++.  ..+++ .++.++.-+.+.+.|+++    +. .-....| +++-+.+....     .+  
T Consensus       255 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~-~~~~p~g~~~~~~~~~~~~-----~~--  322 (378)
T PRK07682        255 SMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI----GL-TCHVPGGAFYAFPSISSTG-----LS--  322 (378)
T ss_pred             hccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC----CC-ccCCCCeeEEEEEeccCCC-----CC--
Confidence            112222    233334433  12222 333445555555555543    22 1122323 34444442211     11  


Q ss_pred             HHHHHHHHHH-HCCceeeccC---C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGG---L-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G---~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+...++ ++||++.++.   . ..+.+|+.-  ..   +++++++.++..
T Consensus       323 -~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~--~~---~~~~l~~~l~~l  370 (378)
T PRK07682        323 -SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSY--AT---SLEQLQEAMKRM  370 (378)
T ss_pred             -HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence             245777765 6899998742   1 246788852  22   478999999874

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=97.39  E-value=0.0038  Score=61.12  Aligned_cols=170  Identities=14%  Similarity=0.042  Sum_probs=88.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc----cCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ----ILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~----~~~~~~h   75 (329)
                      ..||+++|+||++. .| .+. .....  ..+|     ..|.+  | .++|.+.+++++.+.+.+....    .......
T Consensus       183 ~~~~~~~ivD~a~~-~~-~~~-~~~~~--~~~d~~~~s~~K~~--g-~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~  254 (397)
T TIGR01976       183 HAAGALVVVDAVHY-AP-HGL-IDVQA--TGADFLTCSAYKFF--G-PHMGILWGRPELLMNLPPYKLTFSYDTGPERFE  254 (397)
T ss_pred             HHcCCEEEEehhhh-cc-ccC-CCHHH--cCCCEEEEechhhc--C-CceEEEEEcHHHHhhCCCccccCccCCCcchhc
Confidence            45799999999985 22 111 11222  2356     35987  3 2689999999887765430000    0000011


Q ss_pred             chhhhcc--HHHHHHHHh-h-H---------------HhH-HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEE
Q psy7882          76 KLKISDT--VRPHVQIKK-S-V---------------LER-FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGV  133 (329)
Q Consensus        76 g~T~agn--lA~aaala~-~-i---------------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gI  133 (329)
                      ++|-.-.  .++.++++- . +               +++ .++..++.++++++|+++- ....+..  -.-.+-++.+
T Consensus       255 ~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~  333 (397)
T TIGR01976       255 LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLP-GVTLYGVARLAARVPTVSF  333 (397)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCccCCCceEEE
Confidence            1222211  333333332 1 1               222 3455666666666665531 0111111  0112334444


Q ss_pred             EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-------------CCCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-------------LSGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-------------~~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      .+.. .         ....+.+.|.++||++..+.             ..+..+|+.+....   |++|++.++++
T Consensus       334 ~~~~-~---------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~---t~~di~~l~~~  396 (397)
T TIGR01976       334 TVHG-L---------PPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYN---TAEEVDRLLEA  396 (397)
T ss_pred             EeCC-c---------CHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccC---CHHHHHHHHHh
Confidence            4421 0         12457888899999998641             12468999987754   68999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=97.37  E-value=0.0025  Score=63.86  Aligned_cols=170  Identities=9%  Similarity=0.002  Sum_probs=89.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechh-HHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..||++||+|+.+. +|-.|........+ ..|     +.|+|+|+.  -|+++++++ +.+.+..   .    ..++. 
T Consensus       193 ~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~~--GG~v~~~~~~~~~~~~~---~----~~~~~-  260 (416)
T PRK13034        193 DEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGPR--GGMILTNDEEIAKKINS---A----VFPGL-  260 (416)
T ss_pred             HHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCCC--CeEEEECcHHHHHHHHh---h----cCCcc-
Confidence            46799999999876 44443211111111 256     359997642  355566554 3333321   0    11111 


Q ss_pred             hhcc---HHHHHHHHh-hHHh----H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          79 ISDT---VRPHVQIKK-SVLE----R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        79 ~agn---lA~aaala~-~ile----~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .++.   ..++.+++- ++++    + .+++.++.++|+++|+++  .++.+.. .....+.-|.|..+.        ..
T Consensus       261 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~--G~~~~~~-~~~t~i~~v~~~~~~--------~~  329 (416)
T PRK13034        261 QGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER--GYDLVSG-GTDNHLLLVDLRPKG--------LS  329 (416)
T ss_pred             cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc--CCEeccC-CCCCcEEEEEcCCCC--------CC
Confidence            1111   111111121 2221    1 467888888888888764  2222210 012344455554311        01


Q ss_pred             HHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++...+        ..+..+|+.+..+.+ .++++||+.+++++
T Consensus       330 ~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l  386 (416)
T PRK13034        330 GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI  386 (416)
T ss_pred             HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence            2335577888999997521        023568988777555 77899999999985

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=97.35  E-value=0.0029  Score=62.10  Aligned_cols=172  Identities=12%  Similarity=0.012  Sum_probs=90.2

Q ss_pred             ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST-CTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|.||++ .|+--.|...  .... ..|     +.|++ +| .+.|++++++ ++.+.+..  ..  .+... +
T Consensus       186 ~~~~~~li~D~a~~~g~~~~g~~~--~~~~-~~dv~~~s~sK~l-~G-~~gg~i~~~~~~~~~~l~~--~~--~~~~~-~  255 (402)
T cd00378         186 DEVGAYLLVDMAHVAGLVAGGVFP--NPLP-GADVVTTTTHKTL-RG-PRGGLILTRKGELAKKINS--AV--FPGLQ-G  255 (402)
T ss_pred             HhcCCEEEEEccchhhhhhcccCC--Cccc-CCcEEEeccccCC-CC-CCceEEEeccHHHHHHHHH--Hh--Ccccc-C
Confidence            4679999999996 4542223111  1111 347     35999 44 3678888877 88777643  10  01111 1


Q ss_pred             hhhcc--HHHHHHHHh--h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          78 KISDT--VRPHVQIKK--S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        78 T~agn--lA~aaala~--~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      +....  .+++.++..  + .+++ .+++.+..+++.+.|.++  .......-. -+.++.+.+....     .+   ..
T Consensus       256 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~-~~~~v~v~~~~~~-----~~---~~  324 (402)
T cd00378         256 GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER--GFKVVSGGT-DNHLVLVDLRPKG-----IT---GK  324 (402)
T ss_pred             CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC--CCeEeecCC-CCeEEEEeCCccC-----CC---HH
Confidence            11111  222222322  1 2222 455666666777766653  122211111 2555556664211     01   23


Q ss_pred             HHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      .+.+.|.++||++.+..        ...+.+|+.+..+.+ .++++|++++++++
T Consensus       325 ~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l  379 (402)
T cd00378         325 AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFI  379 (402)
T ss_pred             HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHH
Confidence            45666788999996421        134678987765442 34689999999974

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=97.34  E-value=0.0026  Score=61.44  Aligned_cols=157  Identities=10%  Similarity=0.008  Sum_probs=83.4

Q ss_pred             cccceEEehhHhhchhccchhhhh-cccC-Cc-ch-HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGF-QCLQ-IC-RF-VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~-e~~G-V~-PD-i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .+|+++|.||++.+|. .+..-.. ..+. +. =. ++|+++ .| +.+|.+++++++.+.+..  ..        .+++
T Consensus       186 ~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~--~~--------~~~~  253 (361)
T PRK00950        186 STDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAG-LRIGYGFVPEWLIDYYMR--AK--------TPFS  253 (361)
T ss_pred             HCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCch-hhcchhcCCHHHHHHHHH--hc--------CCCC
Confidence            3589999999998874 1111111 1110 00 00 579997 66 489999999998877653  11        1112


Q ss_pred             cc-HHH---HHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRP---HVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~---aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      .+ ++.   .+++.. +.+++   ..+.-...++.|.+...    +.-...-|.++-+.+. .      .   ....+.+
T Consensus       254 ~~~~~~~~a~~~l~~~~~~~~---~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~-~------~---~~~~~~~  316 (361)
T PRK00950        254 LTRLSQAAAIAALSDKEYIEK---SIEHGIKSREYLYNELP----FKVYPSEANFVLVDVT-P------M---TAKEFCE  316 (361)
T ss_pred             CCHHHHHHHHHHhcCHHHHHH---HHHHHHHHHHHHHhhcC----eeECCCcceEEEEECC-C------C---CHHHHHH
Confidence            22 222   223333 33332   22222223333322211    1111123455556652 1      1   1346888


Q ss_pred             HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.++..    ..+.+|+...      +.+|++++++++
T Consensus       317 ~l~~~gv~v~~~~~f~~~~~~~lRis~~------~~~~~~~l~~~L  356 (361)
T PRK00950        317 ELLKRGVIVRDCTSFRGLGDYYIRVSIG------TFEENERFLEIL  356 (361)
T ss_pred             HHHHCCEEEeeCCccCCCCCCeEEEECC------CHHHHHHHHHHH
Confidence            88899999987421    2457888742      467999999875

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=97.32  E-value=0.0046  Score=63.67  Aligned_cols=171  Identities=9%  Similarity=-0.049  Sum_probs=95.9

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+|++|++|+.|+ +|-.|.....+.++.  ..|     +.|+|.|-.  -|.+++++++.+.+..  .   .++..|+.
T Consensus       246 ~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~--GG~I~~~~~l~~~L~~--a---~P~i~gg~  317 (493)
T PRK13580        246 EVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPR--GGLVLAKKEYADAVDK--G---CPLVLGGP  317 (493)
T ss_pred             HcCCEEEEECchh-hceeccccchhhcCCCCCCcEEEeCChhhccCCC--eEEEEecHHHHHHHhh--C---CCcccCCC
Confidence            5799999999998 555542221222222  245     359997631  3667778887776642  0   01211111


Q ss_pred             hhcc-HHHHHHHHhhHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH-HH
Q psy7882          79 ISDT-VRPHVQIKKSVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH-MT  151 (329)
Q Consensus        79 ~agn-lA~aaala~~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~-~~  151 (329)
                      ..-. .|.+.++. ++.    .+ .+++.+..++|++.|++.  .++.+.. ...--++-|.+.+         .+. ..
T Consensus       318 l~p~iAA~avAl~-e~~~~ef~~y~~~l~~Na~~La~~L~~~--G~~vv~g-gTdshIV~V~lg~---------~~~~g~  384 (493)
T PRK13580        318 LPHVMAAKAVALA-EARTPEFQKYAQQVVDNARALAEGFLKR--GARLVTG-GTDNHLVLIDVTS---------FGLTGR  384 (493)
T ss_pred             ccHHHHHHHHHHH-HHhCccHHHHHHHHHHHHHHHHHHHHhc--CCCccCC-CCCCCEEEEEeCC---------HHHHHH
Confidence            1111 11122221 222    11 567888888888888764  2333210 0122445555542         122 34


Q ss_pred             HHHHHHHHCCceeeccC----C----CCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGG----L----SGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G----~----~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      .+.+.|.+.||++....    +    ....|||.++-+.+ .++++|++++++++
T Consensus       385 ~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l  439 (493)
T PRK13580        385 QAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELI  439 (493)
T ss_pred             HHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHH
Confidence            56778999999997421    1    14679999776554 67899999999975

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=97.31  E-value=0.0013  Score=64.41  Aligned_cols=178  Identities=10%  Similarity=0.015  Sum_probs=89.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--cCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~~~~hg~   77 (329)
                      ..+|+++|+||.+. +|..+.-.    ....+|     ++|++++|. |+|.+++++++.+.+......  .......++
T Consensus       173 ~~~~~~livDea~~-~g~~~~~~----~~~~~di~v~s~sK~~~~~g-~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~  246 (370)
T TIGR02539       173 REKGVPLLLNCAYT-VGRMPVSA----KEIGADFIVGSGHKSMAASG-PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGC  246 (370)
T ss_pred             HHcCCeEEEECccc-cCCcCCCH----HHcCCCEEEeeCcccccCCC-CEEEEEECHHHHhhhcccccCCccceeeeecc
Confidence            45699999999987 33222111    112356     469998764 899999999988876531000  000001112


Q ss_pred             hhhcc--HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          78 KISDT--VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        78 T~agn--lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      |....  .+..+++..  +.+++..+..+..++|+++|+++  ....+..--...-++.+++..-...... +......+
T Consensus       247 ~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~s~t~~v~~~~~~~~~~~~~-~~~~~~~~  323 (370)
T TIGR02539       247 TSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI--GFIQLGQKPKEHDLVKFETPGFHEIAQK-HKRRGYFL  323 (370)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcEEEccCCCcCceEEEECCchhHHhhh-hccccHHH
Confidence            21111  222222321  22222222333456777777764  1111100011222333433100000000 01123468


Q ss_pred             HHHHHHCCce-eeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLL-LGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVL-l~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|.++||+ +++.  ..+.+|+.. +   .++++|++++++++
T Consensus       324 ~~~L~e~GI~~ir~~--~~~~iRis~-~---~~t~e~i~~l~~~L  362 (370)
T TIGR02539       324 YEELKKRGIHGIRSG--QTKYFKLSV-Y---GLTKEQVEYVVDSF  362 (370)
T ss_pred             HHHHHhCCCccccCC--cceEEEEEe-c---CCCHHHHHHHHHHH
Confidence            8999999997 5542  245888875 2   25899999999985

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK05764 aspartate aminotransferase; Provisional

Probab=97.25  E-value=0.0043  Score=60.75  Aligned_cols=175  Identities=9%  Similarity=-0.025  Sum_probs=88.3

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcc--cCCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQC--LQICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~--~GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|.||+...+...|.. .+...  .+..+ +     ++|.++ .|+ .+|.+++++++.+.+..  ... ....
T Consensus       194 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~--~~~-~~~~  269 (393)
T PRK05764        194 VEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSK--LQS-HSTS  269 (393)
T ss_pred             HHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccc-eeEEEecCHHHHHHHHH--HHh-hccc
Confidence            3579999999998766332321 11111  11111 1     579998 774 89999999999887753  110 0011


Q ss_pred             cchhhhccHHHHHHHH-h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHH
Q psy7882          75 HKLKISDTVRPHVQIK-K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        75 hg~T~agnlA~aaala-~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +.++++. .++..+++ . +.+++ .++.++..+.+.+.|    ++++.+.-.+..| .++.+.+..... ...   ...
T Consensus       270 ~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~g~~~~~~~g~~~~~~~~~~~~~-~~~---~~~  340 (393)
T PRK05764        270 NPTSIAQ-YAAVAALNGPQDEVEEMRQAFEERRDLMVDGL----NEIPGLECPKPEGAFYVFPNVSKLLG-KSI---TDS  340 (393)
T ss_pred             CCChHHH-HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH----hhCCCCcccCCCcceEEEEecccccc-ccc---CCH
Confidence            1111111 22223333 1 22222 222333333344444    3443332233444 445555532110 000   012


Q ss_pred             HHHHHHHH-HCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCK-EHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~-e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++...++ ++||.+.++...  .+.+|+.  +..   +++++++++++.
T Consensus       341 ~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~---~~~~~~~~i~~l  385 (393)
T PRK05764        341 LEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YAT---SLEDLEEGLERI  385 (393)
T ss_pred             HHHHHHHHHhCCEEEccccccCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence            45666665 579999875322  4788886  322   589999999875

>PRK07550 hypothetical protein; Provisional

Probab=97.22  E-value=0.0075  Score=59.12  Aligned_cols=167  Identities=8%  Similarity=-0.060  Sum_probs=87.8

Q ss_pred             ccccceEEehhHhhchhccchhh--hhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL--GFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f--A~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .++++++|.||+...|.-.+...  .....+-.+.      ++|.++ .| +.+|.+++++++++.+..        ...
T Consensus       193 ~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~--------~~~  263 (386)
T PRK07550        193 RRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEK--------FMD  263 (386)
T ss_pred             HHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHH--------HHh
Confidence            45799999999998773211100  0011111111      679997 77 489999999988877653        111


Q ss_pred             chhhhcc----HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh
Q psy7882          76 KLKISDT----VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        76 g~T~agn----lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~  147 (329)
                      ..+.+.+    .+++.++..  +.+++ .++.++..+.+.+.|+..    +.+ .+... |.+.-+.+....     .  
T Consensus       264 ~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~g~~~~~~~~~~~~-----~--  331 (386)
T PRK07550        264 TVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----PGW-ELLASGAYFAYVRHPFPD-----R--  331 (386)
T ss_pred             hcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCc-eeCCCceEEEEecCCCCC-----C--
Confidence            1112222    233333332  22222 233444444555555443    222 22233 344455553201     1  


Q ss_pred             HHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       -...+...|. ++||++.++..    ..+.+|+.-..    .++++++++++..
T Consensus       332 -~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~----~~~~~~~~~~~~l  381 (386)
T PRK07550        332 -PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN----ADVAGIGELVERL  381 (386)
T ss_pred             -CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec----CCHHHHHHHHHHH
Confidence             1345767664 68999988421    24578886542    2478999998864

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=97.22  E-value=0.0053  Score=60.81  Aligned_cols=173  Identities=9%  Similarity=-0.003  Sum_probs=87.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..+|+++|.||++. +|.++........+ ..|     +.|+++|  .+.|+++++ +++.+.+..  ..  .++. .++
T Consensus       190 ~~~~~~livD~a~~-~g~~~~g~~~~~~~-~~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~--~~--~~~~-~~~  260 (416)
T PRK00011        190 DEVGAYLMVDMAHI-AGLVAAGVHPSPVP-HADVVTTTTHKTLRG--PRGGLILTNDEELAKKINS--AV--FPGI-QGG  260 (416)
T ss_pred             HHcCCEEEEECcch-hcccccCccCCCCC-CCcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHH--Hh--Cccc-cCC
Confidence            45799999999975 23332100011122 346     3599954  267788885 578776653  11  0111 111


Q ss_pred             hhcc-HHH-HHHH-Hh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          79 ISDT-VRP-HVQI-KK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        79 ~agn-lA~-aaal-a~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      .... ++. .+++ +.  +.+++ .++..+..+++++.|+++  ......+ .....++.+.+.+..     +   ....
T Consensus       261 ~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~i~~~~~~-----~---~~~~  329 (416)
T PRK00011        261 PLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER--GFRVVSG-GTDNHLVLVDLRSKG-----L---TGKE  329 (416)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeeeec-CCCCeEEEEeCcccC-----C---CHHH
Confidence            1111 111 1111 11  12233 667788888888888764  1111110 012244445543210     1   1245


Q ss_pred             HHHHHHHCCceeeccC--------CCCCEEEEeCcc-ccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGG--------LSGNTLTALQPK-LLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL-~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||.+....        ..++.+|+...- +...++++|++++++++
T Consensus       330 ~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l  383 (416)
T PRK00011        330 AEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELI  383 (416)
T ss_pred             HHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHH
Confidence            7788889999987321        113456764322 22135789999999985

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=97.18  E-value=0.0064  Score=59.04  Aligned_cols=158  Identities=9%  Similarity=-0.078  Sum_probs=90.7

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+++++|.||+...|...-.+...  .. .|+      ++|.++ .|+ -+|.+++++++.+.+..  ..   ...+.++
T Consensus       161 ~~~~~vI~DEay~~~~~~~s~~~~--~~-~~~vi~l~SfSK~~gl~Gl-RiGy~v~~~~li~~l~~--~~---~~~~vs~  231 (339)
T PRK06959        161 ARGGTLIVDEAFADTLPAASLAAH--TD-RPGLVVLRSVGKFFGLAGV-RAGFVLAAPALLAALRD--AL---GAWTVSG  231 (339)
T ss_pred             HcCCEEEEECCCccCCCcccchhc--cC-CCCEEEEecChhhcCCcch-heEEEecCHHHHHHHHH--hc---CCCCCcH
Confidence            357889999998877321111111  11 233      679998 784 89999999999988764  11   0111122


Q ss_pred             hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      .+ -.+..++++. +..++ .+.+++.-+++.+.|+++    +.  .+...|.++-+.+..            ...+...
T Consensus       232 ~~-q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~--~~~~~~~f~~~~~~~------------~~~l~~~  292 (339)
T PRK06959        232 PA-RHAVRAAFADAAWQAAMRERLAADGARLAALLRAH----GF--AVHATPLFSWTDDPR------------AAALHAA  292 (339)
T ss_pred             HH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CC--CccCcceEEEEeCCC------------HHHHHHH
Confidence            21 1334444544 44333 444555555666666553    22  122234444444310            2458889


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||+++.++ ..+.+|+.    +. .+.+|.+.+++++
T Consensus       293 l~~~GI~vr~~~-~~~~lRis----i~-~~~~e~~~l~~al  327 (339)
T PRK06959        293 LARRGIWTRYFA-PPPSVRFG----LP-ADEAEWQRLEDAL  327 (339)
T ss_pred             HHhCCeEEEECC-CCCeEEEE----CC-CCHHHHHHHHHHH
Confidence            999999998765 34578876    21 1467889998875

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=97.10  E-value=0.012  Score=56.71  Aligned_cols=157  Identities=9%  Similarity=-0.042  Sum_probs=87.2

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+|+++|.||+..-|.-.+..-......-.+.      ++|.++ .|+ =+|-+++++++.+.+..        ..  ..
T Consensus       153 ~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiGy~v~~~~li~~l~~--------~~--~~  221 (332)
T PRK06425        153 KKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL-RIGYIATDDYNMKISRK--------IT--EP  221 (332)
T ss_pred             HcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchh-hheeeecCHHHHHHHHH--------cC--CC
Confidence            46899999999887743221001111111122      689999 884 89999999999887763        11  11


Q ss_pred             hhcc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          79 ISDT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        79 ~agn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      +..+ .+. +++..    ..+++ .+..++.-+++.+.|++    ++. ..+ ...|.++-+.+. +           ..
T Consensus       222 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~~g~f~~~~~~-~-----------~~  283 (332)
T PRK06425        222 WSVCDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEA----MGF-RAAGDPSANFITFMIP-D-----------AH  283 (332)
T ss_pred             CccCHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH----CCC-EECCCCCceEEEEEcC-C-----------HH
Confidence            2222 222 22222    22222 23334444444444443    332 112 234666656552 1           24


Q ss_pred             HHHHHHHHCCceeeccCCC----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGLS----GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~~----~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|.++||.+.++...    .+.+|+.    +.  +.++.+.+++++
T Consensus       284 ~~~~~l~~~gi~v~~~~~f~~~~~~~iRis----~~--~~~~~~~l~~al  327 (332)
T PRK06425        284 DFYSYLLKNGILVRLLDDYECLGEQYIRIA----IR--RRSFNIKLVNAL  327 (332)
T ss_pred             HHHHHHHHCCeEEEECCCCCCCCCCEEEEE----eC--CHHHHHHHHHHH
Confidence            5778888999999885322    3567764    22  578999999875

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=97.07  E-value=0.015  Score=57.09  Aligned_cols=166  Identities=13%  Similarity=-0.001  Sum_probs=86.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHHhhhhhhhccCC--------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQILK--------   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~--------   71 (329)
                      ..+|+++|+|++|. +|.. . ....  ...+|   ++  |.++ . .-+|.+.+++++.+.+.+. .....        
T Consensus       184 ~~~~~~~ivD~a~~-~~~~-~-~~~~--~~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~~  255 (398)
T TIGR03392       184 HQYGAVVVVDGAQG-VVHG-P-PDVQ--ALDIDFYAFSGHKLYG-P-TGIGVLYGKTELLEAMPPW-QGGGKMLSHVSFD  255 (398)
T ss_pred             HHcCCEEEEEhhhh-cCCC-C-CChh--hcCCCEEEEecccccC-C-CceEEEEEcHHHHhhCCCe-ecCCceEeecccc
Confidence            45799999999996 3221 1 1112  23467   34  9543 2 1378888898887655320 00000        


Q ss_pred             --------CCccchhhhc-c-HHHHHHHHhhHHhH--H----HHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEE
Q psy7882          72 --------TPAHKLKISD-T-VRPHVQIKKSVLER--F----VHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVD  134 (329)
Q Consensus        72 --------~~~hg~T~ag-n-lA~aaala~~ile~--l----e~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIe  134 (329)
                              .....+|..- + +++.+++  +.+++  +    ++..++.+++.+.|++    .+.+.-.. ..+.++.+.
T Consensus       256 ~~~~~~~~~~~e~GT~~~~~~~a~~~al--~~l~~~g~~~i~~~~~~l~~~l~~~l~~----l~g~~~~~~~~~~i~~~~  329 (398)
T TIGR03392       256 GFIPQAVPHRFEAGTPNIAGVIGLSAAL--EWLTDIDIAAAEAWSVSLADLAEERLAQ----LPGFRSFRCPGSSLLAFD  329 (398)
T ss_pred             ccccCCChhhccCCCCCHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCCCCcEEEEE
Confidence                    0001112221 1 3444443  33322  2    3444555555555543    33221111 123355555


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.. .      +   ...+...|.++||.++....          .+..||+.|....   |++|+|.+++++
T Consensus       330 ~~~-~------~---~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~---t~~ei~~l~~~l  389 (398)
T TIGR03392       330 FAG-V------H---HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYN---TQQDVDALVDAV  389 (398)
T ss_pred             eCC-c------C---HHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccC---CHHHHHHHHHHH
Confidence            421 0      1   23577778899999875321          1368999998764   689999999985

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK09105 putative aminotransferase; Provisional

Probab=97.03  E-value=0.012  Score=57.91  Aligned_cols=159  Identities=9%  Similarity=0.068  Sum_probs=87.5

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +|+++|.||+...|+.....  .+...-.++      ++|.+| .| +-+|.+++++++.+.+..  ..     .+..+.
T Consensus       196 ~~~~lIvDEaY~~f~~~~s~--~~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~--~~-----~~~~~~  265 (370)
T PRK09105        196 AGSVLLVDEAYIHFSDAPSV--VDLVAQRKDLIVLRTFSKLYGMAG-MRLGLAAARPDLLAKLAR--FG-----HNPLPV  265 (370)
T ss_pred             CCcEEEEECchHHhccCcch--HHHHhhCCCEEEEecccHhhcCCc-cceeeeecCHHHHHHHHh--cC-----CCCcCH
Confidence            58999999999777431111  111111233      579996 66 489999999999887763  10     111111


Q ss_pred             hccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882          80 SDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC  157 (329)
Q Consensus        80 agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l  157 (329)
                      .+..+..+++.. +.+++ .++.++.-+++.+.|++    ++. .-+...|.++.+.+..        +   ...+.+.|
T Consensus       266 ~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~~~f~~~~~~~--------~---~~~l~~~L  329 (370)
T PRK09105        266 PAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK----KGY-KCTPSQANCFMVDVKR--------P---AKAVADAM  329 (370)
T ss_pred             HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-CcCCCCCcEEEEeCCC--------C---HHHHHHHH
Confidence            111222333333 44433 34455555555555544    332 1122445555455421        1   24588888


Q ss_pred             HHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         158 KEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       158 ~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++||++... +..++.+|+...      ++++++.+++++
T Consensus       330 ~~~gI~v~~~~~~~~~~~Ris~~------~~~~~~~l~~al  364 (370)
T PRK09105        330 AKQGVFIGRSWPIWPNWVRVTVG------SEEEMAAFRSAF  364 (370)
T ss_pred             HHCCcEEecCCCCCCCeEEEEcC------CHHHHHHHHHHH
Confidence            9999998422 112567887632      468889988875

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=97.01  E-value=0.008  Score=57.84  Aligned_cols=164  Identities=12%  Similarity=0.046  Sum_probs=90.3

Q ss_pred             cccceEEehhHhhchhccch-hhh-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGT-YLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~-~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+++++|.||+..++..... ++. .....-.++      ++|+++ -| +.+|.+++++++.+.+..  ...   ....
T Consensus       179 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~--~~~---~~~~  252 (363)
T PF00155_consen  179 EYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRR--FQR---SGLS  252 (363)
T ss_dssp             HTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHH--HHH---HTTS
T ss_pred             ccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccc-cccccccchhhhhhhhhh--ccc---cccc
Confidence            46999999999998844322 111 111122222      579986 56 488999999988887763  110   0111


Q ss_pred             hhhhccHHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDTVRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agnlA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      ++.... ++++.+.. .    .+++ .+..++.-+++.+.|++.    +.  .+.+  -|.++-+.+..          .
T Consensus       253 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----~~--~~~~~~~~~~~~~~~~~----------~  315 (363)
T PF00155_consen  253 SSPMQA-AAAAALSDPELVEKWLEELRERLRENRDLLREALEEI----GI--TVLPPEAGFFLWVRLDP----------N  315 (363)
T ss_dssp             SHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TS--EEEHHSBSSEEEEEESH----------H
T ss_pred             cchhhH-HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh----hh--heeeccCccEEEEEccc----------c
Confidence            222211 22223333 2    2222 334444444455544443    22  2222  35555555532          1


Q ss_pred             HHHHHHHHHHHC-CceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         149 HMTHILDSCKEH-GLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       149 ~~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      ....+.+.|+++ ||++.+...  ..+.+|+.-    ..+++++++++++.
T Consensus       316 ~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~----a~~~~e~~~~~~~~  362 (363)
T PF00155_consen  316 DAEELAQELLEEYGILVRPGSYFGVPGYIRISL----ASHSEEDLEEALER  362 (363)
T ss_dssp             HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG----GCSCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe----ccCCHHHHHHHHhh
Confidence            245688889888 999988421  256788753    23478999999874

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=97.00  E-value=0.017  Score=56.80  Aligned_cols=165  Identities=12%  Similarity=-0.017  Sum_probs=87.6

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--cC--------
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--IL--------   70 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~--------   70 (329)
                      .+|+++|+|+++. .|-.  -....  ...+|     +.|.+| . ..+|++.+++++.+.+.+...+  ..        
T Consensus       187 ~~~~~~ivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K~~g-p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~  259 (403)
T TIGR01979       187 QVGAKVLVDGAQA-VPHM--PVDVQ--ALDCDFYVFSGHKMYG-P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEET  259 (403)
T ss_pred             HcCCEEEEEchhh-cCcc--ccCcc--ccCCCEEEEecccccC-C-CCceEEEEchHHHhcCCCeecCCCceeecccCcc
Confidence            4699999999985 3221  11112  23467     349653 2 2478888898876654320000  00        


Q ss_pred             ------CCCccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEE-----eeceee
Q psy7882          71 ------KTPAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVR-----GKGLMI  131 (329)
Q Consensus        71 ------~~~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VR-----G~GLm~  131 (329)
                            ..+.+ +|....  +++.+++  +.+.+      .++..++.+++.++|+++    +.+.-+.     ..+.++
T Consensus       260 ~~~~~~~~~~~-gt~~~~~~~al~~al--~~~~~~g~~~~~~~~~~l~~~l~~~l~~~----~g~~~~~~~~~~~~~~~v  332 (403)
T TIGR01979       260 TYNEAPHKFEA-GTPNIAGVIGLGAAI--DYLEAIGLENIEAHEHELTAYALERLGEI----PGLRIYGPRDAEDRGGII  332 (403)
T ss_pred             ccCCChhhcCC-CCccHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCccccCceE
Confidence                  00001 111111  3333333  23222      455666666666666543    2211110     125577


Q ss_pred             EEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         132 GVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       132 gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+...       +   ...+.+.|.++||.+++..          ..+..+|+.+.+..   |++|++++++++
T Consensus       333 ~~~~~~~-------~---~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~---t~~di~~l~~~l  395 (403)
T TIGR01979       333 SFNVEGV-------H---PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYN---TEEDIDALVEAL  395 (403)
T ss_pred             EEEeCCc-------C---HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCC---CHHHHHHHHHHH
Confidence            7776321       0   2347778889999886421          01467999988665   589999999985

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=96.99  E-value=0.018  Score=55.84  Aligned_cols=153  Identities=7%  Similarity=0.025  Sum_probs=86.7

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +++++|.||+...|...+.....  ..-.+.      ++|.++ .|+ -+|.+++++++.+.+..  .       + .++
T Consensus       185 ~~~~iI~De~y~~~~~~~~~~~~--~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~--~-------~-~~~  251 (357)
T PRK14809        185 EETLVVVDEAYGEFAERPSAVAL--VEERDDVAVLRTFSKAYGLAGL-RLGYAVVPEEWADAYAR--V-------N-TPF  251 (357)
T ss_pred             cCcEEEEechhhhccCCchhHHH--HhhCCCEEEEecchhHhcCcch-hheeeecCHHHHHHHHH--h-------C-CCC
Confidence            37899999999988543332111  111111      679997 774 89999999998887763  1       1 123


Q ss_pred             hcc-HHHHHHHH---h-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIK---K-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala---~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +.+ ++..++++   . +.++   +..+.-+.-++.+.+..+.+.    ...-|.++.+++.+            ...+.
T Consensus       252 ~~~~~~~~~a~~~l~~~~~~~---~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~~------------~~~~~  312 (357)
T PRK14809        252 AASELACRAGLAALDDDEHVE---RTVETARWAREYIREELDAPT----WESAGNFVLAEVGD------------ASAVA  312 (357)
T ss_pred             CCCHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECCC------------HHHHH
Confidence            334 44333332   2 3332   222222222333333322221    13456777766521            23477


Q ss_pred             HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.++..  .++.+|+.-   .   +.++++++++++
T Consensus       313 ~~l~~~gv~v~~g~~f~~~~~iRls~---~---~~~~~~~~l~~L  351 (357)
T PRK14809        313 EAAQERGVIVRDCTSFGLPECIRITC---G---TREETERAVEVL  351 (357)
T ss_pred             HHHHHCCEEEEECccCCCCCeEEEec---C---CHHHHHHHHHHH
Confidence            778899999988532  246788762   2   468999998874

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=96.96  E-value=0.0091  Score=58.91  Aligned_cols=181  Identities=9%  Similarity=0.018  Sum_probs=89.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC--CCCccc
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--KTPAHK   76 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--~~~~hg   76 (329)
                      ...+|+++|+|+++. +|..+  +....+|+  |     ..|.++++. ++|.+++++++.+.+........  .....+
T Consensus       184 a~~~g~~livD~a~~-~g~~~--~~~~~~g~--D~~~~s~~K~l~~~~-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~  257 (387)
T PRK09331        184 AHEYGIPFLLNGAYT-VGRMP--VDGKKLGA--DFIVGSGHKSMAASA-PSGVLATTEEYADKVFRTSRKFGVKEVELLG  257 (387)
T ss_pred             HHHcCCEEEEECCcc-cCCcC--CCHHHcCC--CEEEeeCcccccCCC-CEEEEEECHHHHhhcccccCCCcccceeeec
Confidence            346799999999987 33221  11123343  5     359998774 88999999988776542000000  000012


Q ss_pred             hhhh--ccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          77 LKIS--DTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        77 ~T~a--gnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      +|+.  ..++..++++.  +.++.+++..+..++++++|+++. .+....+-.....+..++.. .-.....-.......
T Consensus       258 ~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~-g~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~  335 (387)
T PRK09331        258 CTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE-GFKQLGEKPRNHDLMKFETP-SFDEIAKKHKRRGFF  335 (387)
T ss_pred             eecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeccCcCcCCeEEEeCC-chhHHhhhccccchh
Confidence            2222  11333333322  222223444556666766666541 01111100111223334332 000000000012355


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||+..+.+ .+.++++..+-    ++++|++.+++++
T Consensus       336 ~~~~L~~~gI~~~~~~-~~~i~ri~~~g----~t~~di~~l~~aL  375 (387)
T PRK09331        336 LYEELKKRGIHGIKPG-ATKEFKLSTYG----LTWEQVEYVADAF  375 (387)
T ss_pred             HHHHHHHcCceEEccC-CceEEEEEecc----CCHHHHHHHHHHH
Confidence            8888999999854433 34566665522    4789999999985

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=96.94  E-value=0.024  Score=55.80  Aligned_cols=166  Identities=11%  Similarity=-0.037  Sum_probs=87.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCC--------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK--------   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~--------   71 (329)
                      ..+|+++|+||+|. +|..    ......+.+|     ..|.+ | ..-+|.+.+++++.+.+.+. .....        
T Consensus       187 ~~~g~~~ivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~-g-p~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~~  258 (401)
T PRK10874        187 HQAGMVVMVDGAQG-AVHF----PADVQALDIDFYAFSGHKLY-G-PTGIGVLYGKSELLEAMSPW-QGGGKMLTEVSFD  258 (401)
T ss_pred             HHcCCEEEEECCcc-cccc----cCCchhcCCCEEEEeccccc-C-CCccEEEEEchHHHhcCCCe-ecCCcceEeeccC
Confidence            45799999999985 3322    1122223467     23944 3 11368888898887655320 00000        


Q ss_pred             --------CCccchhhhc-c-HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEE
Q psy7882          72 --------TPAHKLKISD-T-VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVD  134 (329)
Q Consensus        72 --------~~~hg~T~ag-n-lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIe  134 (329)
                              .....+|-.- + +++.++++  .+++      .++.+++.+++.++|++    ++.+.-++ ..+.++.+.
T Consensus       259 ~~~~~~~~~~~e~Gt~~~~~~~al~~al~--~l~~~g~~~~~~~~~~l~~~l~~~l~~----~~g~~~~~~~~~~i~~~~  332 (401)
T PRK10874        259 GFTPQSAPWRFEAGTPNVAGVIGLSAALE--WLADIDINQAESWSRSLATLAEDALAK----LPGFRSFRCQDSSLLAFD  332 (401)
T ss_pred             ccCCCCChhhccCCCcCHHHHHHHHHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCCCCcEEEEE
Confidence                    0000112121 1 44444443  3322      34455555555555543    33322121 123355555


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.. .      +   ...+.+.|.++||.+.+...          ....+|+.+..-.   |++|||.+++++
T Consensus       333 ~~~-~------~---~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~n---t~edid~ll~al  392 (401)
T PRK10874        333 FAG-V------H---HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYN---TQSDVDALVNAV  392 (401)
T ss_pred             ECC-c------C---HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccC---CHHHHHHHHHHH
Confidence            521 0      1   24577788899999876321          1368999987654   689999999985

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=96.88  E-value=0.0089  Score=58.29  Aligned_cols=167  Identities=12%  Similarity=-0.017  Sum_probs=87.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHHhhhhhhhc-cCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQ-ILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~-~~~~~~hg~T   78 (329)
                      .++|+++|+|++|+ +|..    ..+......|   ++  | +.|. ..+|++..+++..  +.+...+ ........+|
T Consensus       163 ~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s~~K-~~gp-~G~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt  233 (379)
T TIGR03402       163 KERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLSGHK-LHGP-KGVGALYIRKGTR--FRPLLRGGHQERGRRAGT  233 (379)
T ss_pred             HHcCCEEEEECccc-cccc----ccCcccCCCCEEEEcHHH-cCCC-CceEEEEECCCCC--CCCcccCCccCCCcCCCC
Confidence            46799999999997 4321    2222334567   33  9 6553 3578888887642  2110000 0000112233


Q ss_pred             hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe----e-ceeeEEEeecCCCCCCCCChH
Q psy7882          79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG----K-GLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG----~-GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+-.  +++.++++-  +.+++ .++.+++.++++++|.+   ..+.+ .+-|    . .-...+.+.. .      +  
T Consensus       234 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~-~~~~~~~~~~~~~~~~~~~~-~------~--  300 (379)
T TIGR03402       234 ENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIPDA-RLNGDPTKRLPNTVNISFEY-I------E--  300 (379)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCCCE-EEeCCCccCCCCEEEEEecC-C------C--
Confidence            3322  444444432  22332 45566666666666653   12321 1111    1 1123333321 1      1  


Q ss_pred             HHHHHHHHHHHCCceeeccC---C------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGG---L------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G---~------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+...|.++||.+....   .                  ....+|+.|.+..   |++|||++++++
T Consensus       301 -~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~---t~~di~~~~~~l  366 (379)
T TIGR03402       301 -GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYN---TEEDIDYVLEVL  366 (379)
T ss_pred             -HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCC---CHHHHHHHHHHH
Confidence             2357777788999987521   0                  1368999998876   589999999985

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=96.88  E-value=0.02  Score=55.24  Aligned_cols=159  Identities=10%  Similarity=-0.045  Sum_probs=85.0

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+|+++|.||+...+.....+.   .+.-.+.      ++|+++ .|+ =+|.+++.+++.+.+..  ..  .++ ..++
T Consensus       155 ~~~~~iI~DE~y~~~~~~~s~~---~~~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~~~l~~~~~~--~~--~~~-~~~~  225 (330)
T PRK05664        155 ARGGWLVVDEAFMDNTPQHSLA---ACAHRPGLIVLRSFGKFFGLAGA-RLGFVLAEPALLRALAE--LL--GPW-TVSG  225 (330)
T ss_pred             hcCCEEEEECCcccCCCccccc---ccccCCCEEEEeeccccccCCCc-ceEEEEeCHHHHHHHHH--hc--CCC-CCCH
Confidence            4689999999987663211221   1111122      679998 884 89999999998887763  11  001 1111


Q ss_pred             hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      .+. .+..++++. +..++ .+.+.+.-+++.+.|++    ++.. -..|.+.++-+.+.         +   ...+.+.
T Consensus       226 ~~~-~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~-~~~~~~~f~~~~~~---------~---~~~~~~~  287 (330)
T PRK05664        226 PTR-WLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGLT-PAGGCALFQWVRTE---------D---AAALHEF  287 (330)
T ss_pred             HHH-HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCCc-ccCCcceEEEEecC---------C---HHHHHHH
Confidence            111 233334433 33222 23334444444444443    3321 11222244433321         0   2457788


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++...+ ..+.+|+.-.  .   +.++.+++++++
T Consensus       288 l~~~gi~v~~f~-~~~~iRis~~--~---~~~~~~~l~~al  322 (330)
T PRK05664        288 LARRGILTRLFE-QPASLRFGLP--A---DEADWARLDQAL  322 (330)
T ss_pred             HHHCCeEEEECC-CCCeEEEECC--C---CHHHHHHHHHHH
Confidence            999999998654 3567887522  1   356778877764

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=96.87  E-value=0.034  Score=53.86  Aligned_cols=174  Identities=10%  Similarity=0.018  Sum_probs=95.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL---------   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~---------   70 (329)
                      .++|+++|+|.+|+ +|...  +....+  .+|     ..|.|.|+. -+|.+.++++..+.+........         
T Consensus       156 ~~~g~~livD~~~~-~g~~~--~~~~~~--~~D~~~~s~~K~l~~p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (363)
T TIGR02326       156 HRHGKVTIVDAMSS-FGGIP--IDIAEL--HIDYLISSANKCIQGVP-GFGFVIARQAELAACKGNARSLSLDLYDQWRC  229 (363)
T ss_pred             HHcCCEEEEEcccc-ccCcc--cchhhc--CccEEEecCccccccCC-cceEEEECHHHHHHhhcCCCceeecHHHHHHH
Confidence            46799999999886 55332  222333  467     249998763 47889999887765431000000         


Q ss_pred             CCCccc-hhhhcc----HHHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecC
Q psy7882          71 KTPAHK-LKISDT----VRPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQD  138 (329)
Q Consensus        71 ~~~~hg-~T~agn----lA~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d  138 (329)
                      .....+ ..|+.+    .++.++++.  +  -+++ .++.+++.++++++|+++  ....+.  +.+ .+.+..+.+...
T Consensus       230 ~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~-~~~~~~~~~~~~  306 (363)
T TIGR02326       230 MEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL--GFEPLLDDEIQ-SPIITSFYSPED  306 (363)
T ss_pred             HhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccC-CceEEEEECCCC
Confidence            000000 112223    344444432  1  1222 456677777777777654  122221  122 344555555321


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..    +   ....+.+.|.++||.+.+... ..+.+|+.+-.-   .+.+|++.+++++
T Consensus       307 ~~----~---~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~---~~~edv~~~l~~l  356 (363)
T TIGR02326       307 PD----Y---RFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGE---VDAADITRLLTAI  356 (363)
T ss_pred             CC----C---CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCC---CCHHHHHHHHHHH
Confidence            10    1   134578889999999987532 247899986322   2589999999985

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=96.84  E-value=0.038  Score=54.62  Aligned_cols=165  Identities=10%  Similarity=-0.024  Sum_probs=86.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--c-------C
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--I-------L   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~-------~   70 (329)
                      ..+|+++|+|++|. +|..-  +..+  ...+|     ..|.+ |. .-+|++.+++++.+.+.+...+  .       .
T Consensus       191 ~~~~~~vivD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~  263 (406)
T PRK09295        191 HQHGAKVLVDGAQA-VMHHP--VDVQ--ALDCDFYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTE  263 (406)
T ss_pred             HHcCCEEEEEcccc-cCccc--cCch--hcCCCEEEeehhhcc-CC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCC
Confidence            45799999999985 44331  1122  23457     23943 32 1378888898887654320000  0       0


Q ss_pred             --------CCCccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEe---eceee
Q psy7882          71 --------KTPAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRG---KGLMI  131 (329)
Q Consensus        71 --------~~~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG---~GLm~  131 (329)
                              ..+. .+|.+-.  +++.+++  +.+.+      .++.+++.+++.++|.++    +.+ .+-+   .+.++
T Consensus       264 ~~~~~~~~~r~e-~GT~~~~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~l~~~l~~~----~~~-~~~~~~~~~~iv  335 (406)
T PRK09295        264 GTTWAKAPWRFE-AGTPNTGGIIGLGAAL--DYVSALGLNNIAEYEQNLMHYALSQLESV----PDL-TLYGPQNRLGVI  335 (406)
T ss_pred             ccccCCchhhcC-CCCccHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCE-EEeCCCCCceEE
Confidence                    0001 1122211  3333333  33322      345555666666655543    321 1111   23455


Q ss_pred             EEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         132 GVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       132 gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+...          ....+.+.+.++||.++....          .+..+|+.|.+-.   |++|||.+++++
T Consensus       336 ~~~~~~~----------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~yn---t~~did~l~~~l  398 (406)
T PRK09295        336 AFNLGKH----------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN---THEEVDRLVAGL  398 (406)
T ss_pred             EEEECCc----------CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCC---CHHHHHHHHHHH
Confidence            5554311          123466677889998864210          1357999998765   589999999985

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=96.83  E-value=0.011  Score=58.02  Aligned_cols=162  Identities=10%  Similarity=-0.009  Sum_probs=82.2

Q ss_pred             ccccceEEehhHhhch--hccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGS--GDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGf--GRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||+..-+  |-.|.. ....++  +|     ++|+++|.  =+|.+++++++.+.+..        ...+.
T Consensus       165 ~~~~~~livDEAy~~~~~~~~~~~-~~~~~~--~divv~s~SKalaG~--r~G~v~~~~~li~~l~~--------~~~~~  231 (346)
T TIGR03576       165 KSKEAIVLVDDASGARVRRLYGQP-PALDLG--ADLVVTSTDKLMDGP--RGGLLAGRKELVDKIKS--------VGEQF  231 (346)
T ss_pred             HHcCCEEEEECCccccccccCCCC-CHHHcC--CcEEEeccchhcccc--ceEEEEeCHHHHHHHHH--------hhcCc
Confidence            3579999999997632  111221 112333  56     57988664  36889999999887764        11122


Q ss_pred             hhhcc-HHHHHHHHh-hHHh--H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLE--R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile--~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      .|+.+ .+++++++. +.+.  . .+..++..+.+.+.++.+    +..  ....| ++-+.+...       +  -...
T Consensus       232 ~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~----~~~--~~~~~-f~~~~~~~~-------~--~~~~  295 (346)
T TIGR03576       232 GLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL----NVE--RTPTG-FVIKGVEEE-------K--LIEI  295 (346)
T ss_pred             ccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC----CCC--cCCCe-EEEEeCCCC-------C--HHHH
Confidence            22234 444444333 2221  1 234444444454444432    111  12333 333343210       0  1123


Q ss_pred             HHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...+.++||++.++..   .++.+||+-  ...+.++.|.+.+++++
T Consensus       296 ~~~ll~~~gV~v~~~~~f~~~~~~vRis~--~~~~~~~~~~~~~~~al  341 (346)
T TIGR03576       296 GLDLLRNYGIITITAVGMPGASKTLRFDL--AAKDAERIGDDYLVEAV  341 (346)
T ss_pred             HHHHHHhCCEEEeCCcccCCCCCeEEEEE--ecChHHhcCHHHHHHHH
Confidence            45667789999998521   246788742  22110112688888775

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=96.81  E-value=0.027  Score=54.19  Aligned_cols=160  Identities=11%  Similarity=0.023  Sum_probs=87.1

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ++++++|.||+...|+.. ....  .....+.      ++|.++ .|+ -+|.+++++++.+.+..  ..     .+..+
T Consensus       173 ~~~~~livDe~y~~~~~~-~~~~--~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~~~~~~l~~--~~-----~~~~~  241 (353)
T PRK05387        173 NPDSVVVIDEAYVDFGGE-SAIP--LIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHPELIEALNR--VK-----NSFNS  241 (353)
T ss_pred             CCCcEEEEeCcccccCCc-chHH--HHhhCCCEEEEEehhHhhcchhh-hceeeecCHHHHHHHHH--hh-----ccCCC
Confidence            348999999998766421 1111  1111122      679987 774 78888999988877653  11     01012


Q ss_pred             hhcc----HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          79 ISDT----VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        79 ~agn----lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++.+    .++.+++.. +.+++ .+++.+.-+++.+.|++    ++.. -...-|.++.+.+..       .+   ...
T Consensus       242 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~~-------~~---~~~  306 (353)
T PRK05387        242 YPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGFE-VLPSKANFVFARHPS-------HD---AAE  306 (353)
T ss_pred             CCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCe-ECCCcCcEEEEECCC-------CC---HHH
Confidence            2333    233334433 44433 34444444555555544    3321 112224444444321       11   345


Q ss_pred             HHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||++...+.  ..+.+|+.-  .    +.++++++++++
T Consensus       307 ~~~~l~~~gi~v~~~~~~~~~~~iRis~--~----~~~~~~~~~~~L  347 (353)
T PRK05387        307 LAAKLRERGIIVRHFNKPRIDQFLRITI--G----TDEEMEALVDAL  347 (353)
T ss_pred             HHHHHHHCCEEEEECCCCCCCCeEEEEe--C----CHHHHHHHHHHH
Confidence            77888999999976532  246788753  1    468999999875

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=96.69  E-value=0.031  Score=54.41  Aligned_cols=163  Identities=13%  Similarity=0.091  Sum_probs=87.6

Q ss_pred             cccceEEehhHhhchhccchhhh-hcccCCcch------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+++++|.||+...|-..+.... .....-.+.      ++|.++ .|+ -+|.+++. +.+.+.+..  ..   ...+.
T Consensus       172 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RiG~lv~~~~~~~~~~~~--~~---~~~~~  245 (354)
T PRK06358        172 KRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGL-RLGYGLTSNKNLAEKLLQ--MR---EPWSI  245 (354)
T ss_pred             hcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcch-hheeeecCCHHHHHHHHH--hC---CCCcc
Confidence            46899999999987754332111 111111122      679998 884 89988874 567666653  11   01122


Q ss_pred             hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++++. .++.+++.. +.+++ .+.+++.-+++.+.|+    +++.+.-....|.++-+.+..            ...+.
T Consensus       246 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~~~g~f~~~~~~~------------~~~~~  308 (354)
T PRK06358        246 NTFAD-LAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLS----EFKGIKVYKPSVNFIFFKLEK------------PIDLR  308 (354)
T ss_pred             hHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEEcCCcceEEEEEcCc------------hHHHH
Confidence            22211 233334433 33333 2333333344444443    333322223445555555421            14588


Q ss_pred             HHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.++..    .++.+|+.    +.  +.++.+.+++++
T Consensus       309 ~~l~~~gI~v~~~~~f~~~~~~~iRls----~~--~~~~~~~l~~~l  349 (354)
T PRK06358        309 KELLKKGILIRSCSNYRGLDENYYRVA----VK--SREDNKKLLKAL  349 (354)
T ss_pred             HHHHHCCeEEEECCCCCCCCCCEEEEE----eC--CHHHHHHHHHHH
Confidence            888999999998632    23567765    22  578888888874

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=96.68  E-value=0.018  Score=58.36  Aligned_cols=175  Identities=12%  Similarity=0.010  Sum_probs=86.8

Q ss_pred             cccceEEehhHhhchhccch-hhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      .+|++|++|++|+ +|..+. .+.....  ..|+     .|.|.|-.  -|++++++++.+.+.........+..+|+.-
T Consensus       208 ~~ga~l~vDaaq~-~G~i~~~~~~~~~~--~~D~l~~S~hK~l~GP~--Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~  282 (452)
T PTZ00094        208 SVGAYLMADIAHT-SGLVAAGVLPSPFP--YADVVTTTTHKSLRGPR--SGLIFYRKKVKPDIENKINEAVFPGLQGGPH  282 (452)
T ss_pred             HcCCEEEEeccch-hccccCCCCCCCCC--CCcEEEcCCccCCCCCC--ceEEEEecccchHHHHhhccccCCCCCCCch
Confidence            5699999999998 555532 1111111  2572     39887632  2555566655433221000000011222111


Q ss_pred             hcc-HHHHHHHHh-h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        80 agn-lA~aaala~-~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      ... .+++++++. .  -.++ .+++.++.++|.++|++.  ..+....  +. --+.-+.|....     .   ....+
T Consensus       283 ~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~--g~~v~~~--~~~~~~~~v~~~~~~-----~---~~~~~  350 (452)
T PTZ00094        283 NHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR--GYDLVTG--GTDNHLVLVDLRPFG-----I---TGSKM  350 (452)
T ss_pred             HHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC--CcEEecC--CCCCceEeecCCcCC-----C---CHHHH
Confidence            111 333333332 1  1112 456777778887777652  1212110  10 112333343211     0   12346


Q ss_pred             HHHHHHCCceeeccC-------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGG-------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G-------~~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      ...|.++||++...+       ..+..||+.|++..+ -++++|++++++++
T Consensus       351 ~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l  402 (452)
T PTZ00094        351 EKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFL  402 (452)
T ss_pred             HHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHH
Confidence            666667899995321       124689999988753 33489999999975

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=96.66  E-value=0.014  Score=56.76  Aligned_cols=176  Identities=9%  Similarity=-0.029  Sum_probs=86.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc--cCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~~~~hg~   77 (329)
                      ..+|+++|+||++. +|...  +....+|+  |     +.|.+++|. ++|.+++++++.+.+......  .......++
T Consensus       166 ~~~~~~vivD~a~~-~g~~~--~~~~~~~~--d~~~~s~~K~l~~~~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~  239 (361)
T cd06452         166 HEYGVPLLLNGAYT-VGRMP--VSGKELGA--DFIVGSGHKSMAASA-PIGVLATTEEWADIVFRTSQMFKIKEVELLGC  239 (361)
T ss_pred             HHcCCeEEEECCcc-cCCcC--CCHHHcCC--CEEEecCCccccCCC-CeEEEEECHHHHHHHhccccccccceeeeecc
Confidence            45799999999986 33211  22223332  5     459998764 889999999888876431000  000011222


Q ss_pred             hhhcc--HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEE----eeceeeEEEeecCCCCCCCCChHH
Q psy7882          78 KISDT--VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVR----GKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        78 T~agn--lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VR----G~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      |+...  .+..+++..  +.++++.+..+..++|.+.|+++    +.+ .+-    +..-+..++.. .-..........
T Consensus       240 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l----~g~-~v~~~~~~~~n~~~~~~~-~~~~~~~~~~~~  313 (361)
T cd06452         240 TLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI----EGI-KQLGEKPKNHDLMFFETP-SFDEIAKKHKRR  313 (361)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCe-EEECCCCCCCceEEEEcC-Ccchhhhhcccc
Confidence            22111  222223321  22222222223335566555543    211 111    12223333331 000000000011


Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||+....+ .++.+|+..+-    ++++|++.+++++
T Consensus       314 ~~~~~~~L~~~gI~~~~~~-~~~~~ri~~~g----~~~e~~~~l~~al  356 (361)
T cd06452         314 GYFLYSELKKRGIHGIKPG-LTRYFKLSTYG----LTWEQVEYVVDAF  356 (361)
T ss_pred             chhHHHHHHHcCceEEcCC-CceEEEEEecC----CCHHHHHHHHHHH
Confidence            2358889999999975544 34567765422    4789999999975

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=96.66  E-value=0.051  Score=52.61  Aligned_cols=156  Identities=10%  Similarity=0.088  Sum_probs=86.9

Q ss_pred             ccceEEehhHhhchhccchhhh-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      +++++|.||+..-|. ...+.. .+.+   +.      ++|.++ .|+ =+|.+++++++.+.+..  ..   .....++
T Consensus       166 ~~~~ii~DE~Y~~f~-~~~~~~~~~~~---~~vi~~~S~SK~~~l~Gl-RvG~~v~~~~~~~~l~~--~~---~~~~~~~  235 (335)
T PRK14808        166 TGAFVALDEAYYEFH-GESYVDLLKKY---ENLAVIRTFSKAFSLAAQ-RIGYVVSSEKFIDAYNR--VR---LPFNVSY  235 (335)
T ss_pred             cCCEEEEECchhhhc-CCchHHHHHhC---CCEEEEEechhhccCccc-ceEEEEeCHHHHHHHHH--hc---CCCCCCH
Confidence            689999999998773 111111 1111   12      689999 774 88999999999888753  11   0111122


Q ss_pred             hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      .+. .++.+++.. +.+++ .+...+.-+++.+.|+    +++. .-....|.++-+.+...         . ...+.+.
T Consensus       236 ~~q-~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~----~~g~-~~~~~~g~f~~~~l~~~---------~-~~~~~~~  299 (335)
T PRK14808        236 VSQ-MFAKVALDHREIFEERTKFIVEERERMKSALR----EMGY-RITDSRGNFVFIFMEKE---------E-KERLLEH  299 (335)
T ss_pred             HHH-HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH----HCCC-EECCCCCeEEEEeCCCc---------c-HHHHHHH
Confidence            221 223333433 33322 2222222233333333    3342 22234677776666421         1 2457888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||+++..   .+.+|+.    +.  +.++.+++++++
T Consensus       300 l~~~Gi~V~~~---~~~~Ris----i~--~~~~~~~~~~~l  331 (335)
T PRK14808        300 LRAKNIAVRSF---REGVRIT----IG--KREENDMILKEL  331 (335)
T ss_pred             HHHCCeEEEEC---CCCeEEe----cC--CHHHHHHHHHHH
Confidence            99999999864   3557765    22  578889998875

>PRK07908 hypothetical protein; Provisional

Probab=96.64  E-value=0.035  Score=53.66  Aligned_cols=157  Identities=8%  Similarity=-0.048  Sum_probs=82.8

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcc-h------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICR-F------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~P-D------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ++.++|.||++.-|- .|..-....  ..+ +      ++|.++ .|. -+|.+++++++.+.+..  ..   .....++
T Consensus       167 ~~~~iIvDe~y~~~~-~~~~~~l~~--~~~~~~i~i~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~--~~---~~~~~~~  237 (349)
T PRK07908        167 PGRILVVDEAFADAV-PGEPESLAG--DDLPGVLVLRSLTKTWSLAGL-RVGYALGAPDVLARLTR--GR---AHWPVGT  237 (349)
T ss_pred             cCCEEEEECcchhhc-cCCcccccc--ccCCCEEEEeecccccCCccc-eeeeeecCHHHHHHHHh--cC---CCCCccH
Confidence            467888899987652 232111111  122 3      579987 774 78999999988887763  11   0111111


Q ss_pred             hhccHHHHHHH-Hh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          79 ISDTVRPHVQI-KK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        79 ~agnlA~aaal-a~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      .  +.+++.++ ..   +.+++ .++.++.-+++.+.|++    ++ +.-.. .-|.++.+.+..            ...
T Consensus       238 ~--~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~-~~~~~p~~g~~~~~~~~~------------~~~  298 (349)
T PRK07908        238 L--QLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VG-ARVVDPAAAPFVLVRVPD------------AEL  298 (349)
T ss_pred             H--HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CC-cEeccCCCceEEEEECCc------------HHH
Confidence            1  12222222 21   12221 22233333333333333    32 11111 236666665531            235


Q ss_pred             HHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...|.++||++.++..    ..+.+|+...      +.+|++.+++++
T Consensus       299 ~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~------~~~~~~~l~~al  341 (349)
T PRK07908        299 LRKRLRERGIAVRRGDTFPGLDPDYLRLAVR------PRAEVPVLVQAL  341 (349)
T ss_pred             HHHHHHhCCEEEEECCCCCCCCCCeEEEEeC------CCccHHHHHHHH
Confidence            77788899999987532    2468888652      457888888875

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=96.62  E-value=0.033  Score=54.13  Aligned_cols=160  Identities=11%  Similarity=0.009  Sum_probs=85.4

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +++++|.||+..-|......  .......|.      ++|.++ .|+ =+|.+++++++.+.+..  ..  . ..+.++.
T Consensus       177 ~~~~vivDeay~~~~~~~s~--~~~~~~~~~~iv~~S~SK~~~l~Gl-RlG~~i~~~~~~~~l~~--~~--~-~~~~~~~  248 (354)
T PRK04635        177 PDAIVVVDEAYIEFCPEYSV--ADLLASYPNLVVLRTLSKAFALAGA-RCGFTLANEELIEILMR--VI--A-PYPVPLP  248 (354)
T ss_pred             CCcEEEEeCchHhhccCcch--HHHHhhCCCEEEEechHHHhhhhHH-HHhhhhCCHHHHHHHHh--hc--C-CCCCCHH
Confidence            46899999998877421111  111111122      679986 663 67888899988887653  11  0 1111111


Q ss_pred             hccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          80 SDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        80 agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      .. .+..+++..   +.+++ .+++++..+++.+.|++    ++.+.-....|.++-+.+..            ...+.+
T Consensus       249 ~~-~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~~~~------------~~~~~~  311 (354)
T PRK04635        249 VS-EIATQALSEAGLARMKFQVLDLNAQGARLQAALSM----YGGAKVLEGNGNYVLAKFDD------------VDAVFK  311 (354)
T ss_pred             HH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceECCCCCcEEEEECCC------------HHHHHH
Confidence            11 122233322   11222 23344444455555543    34222223346555555521            234677


Q ss_pred             HHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||.++.++.  .++.+|+.-    .  +.+|++.+++++
T Consensus       312 ~l~~~gv~v~~~~~~~~~~~lRis~----~--~~e~~~~l~~al  349 (354)
T PRK04635        312 ALWDAGIVARAYKDPRLANCIRFSF----S--NRAETDKLIGLI  349 (354)
T ss_pred             HHHHCCEEEEECCCCCCCCeEEEEe----C--CHHHHHHHHHHH
Confidence            88899999986532  246788872    2  589999999985

>PRK07568 aspartate aminotransferase; Provisional

Probab=96.58  E-value=0.064  Score=52.58  Aligned_cols=167  Identities=11%  Similarity=-0.001  Sum_probs=88.3

Q ss_pred             cccceEEehhHhhchhccchh-hhhccc-CCcch------HHHhhcC-Cccccceeeec-hhHHHhhhhhhhccCCCCcc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTY-LGFQCL-QICRF------VQKDFKG-SFWDKLIVHTS-TCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~-fA~e~~-GV~PD------i~KaLgG-G~~PigAv~~~-~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .+|+++|.||+..+|...|.. -....+ +..+.      ++|.++. | +.+|.+++. +++.+.+..  ...  ...+
T Consensus       193 ~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~--~~~--~~~~  267 (397)
T PRK07568        193 KHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACG-ARIGCLISKNKELIAAAMK--LCQ--ARLS  267 (397)
T ss_pred             HCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCC-cceEEEecCCHHHHHHHHH--Hhh--ccCC
Confidence            568999999999988655531 111111 22222      5799984 7 489988874 678776543  110  0112


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .++++ ..+++.++..  +.+++ .+..++.-+.+.+.|++    ++.+.-.... |+++-+.+...       +   ..
T Consensus       268 ~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~~~~~~l~~~-------~---~~  332 (397)
T PRK07568        268 PPTLE-QIGAAALLDTPESYFDEVREEYKKRRDILYEELNK----IPGVVCEKPKGAFYIIAKLPVD-------D---AE  332 (397)
T ss_pred             CCcHH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCcceEEEEecCCC-------C---HH
Confidence            22221 1444555543  23332 23344444445554443    3333222233 44445565321       0   22


Q ss_pred             HHHHHHHH------CCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKE------HGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e------~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.+.+      +||++.+...       ..+.+|+.  +..   +++++++.++.+
T Consensus       333 ~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls--~~~---~~~~~~~~~~~l  386 (397)
T PRK07568        333 DFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIA--YVL---NEEDLKRAMEIL  386 (397)
T ss_pred             HHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEE--EeC---CHHHHHHHHHHH
Confidence            35555544      6999987421       13578886  333   468899988874

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=96.56  E-value=0.059  Score=53.66  Aligned_cols=170  Identities=12%  Similarity=0.008  Sum_probs=87.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---C-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL---K-----   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~---~-----   71 (329)
                      ..+|+++|+|++|. +|..    ........+|     ..| +.|. --+|++.+++++.+.+.+...+..   .     
T Consensus       200 ~~~g~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K-~~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~  272 (424)
T PLN02855        200 HAVGAKVLVDACQS-VPHM----PVDVQTLGADFLVASSHK-MCGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDH  272 (424)
T ss_pred             HHcCCEEEEEhhhh-cCCc----CCCchhcCCCEEEeeccc-ccCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCc
Confidence            35689999999995 4332    1121123368     249 4432 137888889888765532000000   0     


Q ss_pred             ------C-Cccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceee----EEeeceeeE
Q psy7882          72 ------T-PAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGD----VRGKGLMIG  132 (329)
Q Consensus        72 ------~-~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~----VRG~GLm~g  132 (329)
                            . ..-.+|-+-.  .++.+++  +.+.+      .++..++.++|.+.|+++. .......    ...++.+..
T Consensus       273 ~~~~~~~~r~e~GT~~~~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~  349 (424)
T PLN02855        273 STYAPPPSRFEAGTPAIGEAIGLGAAI--DYLSEIGMDRIHEYEVELGTYLYEKLSSVP-GVRIYGPKPSEGVGRAALCA  349 (424)
T ss_pred             cccCCChhhccCCChHHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCcccccCcccEEE
Confidence                  0 0001121111  2233333  33322      3455566666666555431 0011111    112244666


Q ss_pred             EEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         133 VDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.. .         ....+.+.|.++ ||.++...          -....+|+.+.+..   |++||+.+++++
T Consensus       350 ~~~~~-~---------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~yn---t~~di~~l~~~l  412 (424)
T PLN02855        350 FNVEG-I---------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYN---TKEEVDAFIHAL  412 (424)
T ss_pred             EEECC-c---------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCC---CHHHHHHHHHHH
Confidence            66531 0         123577778777 99887421          01357999998876   589999999985

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=96.54  E-value=0.052  Score=53.48  Aligned_cols=161  Identities=7%  Similarity=-0.008  Sum_probs=88.6

Q ss_pred             ceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           9 CGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         9 iLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      +++|.||+...|...+....  ...-.+.      ++|.++ .|+ -+|.+++.+++.+.+..  ..   .....++.+.
T Consensus       205 ~~vi~DeaY~~~~~~~~~~~--~~~~~~~viv~~SfSK~~glaGl-RiGy~~~~~~~i~~l~~--~~---~~~~~~~~~q  276 (380)
T PLN03026        205 ILVVLDEAYIEFSTQESRMK--WVKKYDNLIVLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR--AK---QPYNVSVAAE  276 (380)
T ss_pred             CEEEEECcchhhcCCcchHH--HHHhCCCEEEEecchHhhcCccc-cceeeecCHHHHHHHHH--hc---CCCCCCHHHH
Confidence            78999999987743222111  1110111      679997 774 88999999988887653  11   0111111111


Q ss_pred             cHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHH
Q psy7882          82 TVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE  159 (329)
Q Consensus        82 nlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e  159 (329)
                       .++.+++.. +.+++ .+.+.+.-+++.+.|+++    +.+.-...-|.++-+.+..+      .   -...+.+.|.+
T Consensus       277 -~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~~~f~~~~~~~~------~---~~~~~~~~l~~  342 (380)
T PLN03026        277 -VAACAALSNPKYLEDVKNALVEERERLFGLLKEV----PFLEPYPSDANFILCRVTSG------R---DAKKLKEDLAK  342 (380)
T ss_pred             -HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCeECCCCCeEEEEECCCC------C---CHHHHHHHHHH
Confidence             334444544 44443 334444445555555543    32211223455666655321      0   13457888889


Q ss_pred             CCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         160 HGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       160 ~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +||+++++..  ..+.+||.-.      +.++.+.+++++
T Consensus       343 ~gI~v~~~~~~~~~~~lRis~~------~~~~~~~l~~al  376 (380)
T PLN03026        343 MGVMVRHYNSKELKGYIRVSVG------KPEHTDALMEAL  376 (380)
T ss_pred             CCeEEEECCCCCCCCEEEEecC------CHHHHHHHHHHH
Confidence            9999987532  2457887532      467888888774

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=96.49  E-value=0.067  Score=52.00  Aligned_cols=167  Identities=9%  Similarity=0.007  Sum_probs=86.1

Q ss_pred             ccccceEEehhHhhchhccchhhh-hcc--cCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLG-FQC--LQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA-~e~--~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|+++|.||+...+.-.|.... .+.  .+...+       ++|.++ .| +=+|.+++++++.+.+......   ..
T Consensus       178 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~---~~  253 (364)
T PRK07865        178 RERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKH---AG  253 (364)
T ss_pred             HHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHh---cC
Confidence            357999999999987754332211 111  111223       679984 55 3678888999988776530000   01


Q ss_pred             ccchhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882          74 AHKLKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        74 ~hg~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .+.++... .++++++.. +.+++ ....++.-+.+.+.|+    +++.. -.... |+++-+.+..        +   .
T Consensus       254 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~~-~~~~~~~~~~~~~~~~--------~---~  316 (364)
T PRK07865        254 MMVPAPVQ-AAMVAALGDDAHVREQRERYARRRAVLRPALE----AAGFR-VDHSEAGLYLWATRGE--------D---C  316 (364)
T ss_pred             CCcCHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH----HcCCc-ccCCCccEEEEEeCCC--------C---H
Confidence            12222211 233344444 33322 2233333333444443    34421 11232 4444444421        0   2


Q ss_pred             HHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++.++..    ..+.+|+.-  ..   +++++++.++..
T Consensus       317 ~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~--~~---~~~~~~~~~~~l  362 (364)
T PRK07865        317 WDTVAWLAERGILVAPGDFYGPAGAQHVRVAL--TA---TDERIAAAVERL  362 (364)
T ss_pred             HHHHHHHHHCCEEEeCccccCcCCCCEEEEEe--cC---CHHHHHHHHHHh
Confidence            3467788899999987421    245777752  22   478999998764

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=96.47  E-value=0.059  Score=53.84  Aligned_cols=163  Identities=12%  Similarity=-0.008  Sum_probs=86.5

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      |+++|.||+..-|...+. ..  ......+       ++|.++.|+ -+|.+++.+++.+.+... ...  ...+.++++
T Consensus       246 ~~~ii~De~Y~~~~~~~~-~~--~~~~~~~~vi~~~SfSK~~~~Gl-RiG~~i~~~~~~~~~~~~-~~~--~~~~~s~~~  318 (431)
T PRK15481        246 QVLVIIDDHFALLSSSPY-HS--VIPQTTQRWALIRSVSKALGPDL-RLAFVASDSATSARLRLR-LNS--GTQWVSHLL  318 (431)
T ss_pred             CceEEecCchhhhccCCC-CC--CCcCCCCCEEEEeeeccccCCCc-eeEEEeCCHHHHHHHHHH-Hhc--cccCCCHHH
Confidence            899999999887732221 01  0111122       579999885 899999999888877530 000  001112211


Q ss_pred             ccHHHHHHHHh-hH---HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DTVRPHVQIKK-SV---LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gnlA~aaala~-~i---le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      . .++++++.. +.   +++ .+..++.-+.+.+.|+    +++.....-.-|+++-+.+..+           ...+..
T Consensus       319 q-~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~----~~~~~~~~p~gg~f~~~~l~~~-----------~~~~~~  382 (431)
T PRK15481        319 Q-DLVYACLTDPEYQARLAQARLFYAQRRQKLARALQ----QYGIAIPSPGDGLNLWLPLDTD-----------SQATAL  382 (431)
T ss_pred             H-HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHH----HcCCccccCCCeEEEEEECCCC-----------HHHHHH
Confidence            1 344445544 32   111 2223333333333333    2332111223467777766321           234777


Q ss_pred             HHHHCCceeeccCCC-----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLS-----GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~-----~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||.+.+....     ++.+|+.-    ...++++++++++.+
T Consensus       383 ~l~~~gV~v~pg~~f~~~~~~~~iRis~----~~~~~~~i~~~~~~l  425 (431)
T PRK15481        383 TLAKSGWLVREGEAFGVSAPSHGLRITL----STLNDAEINRLAADL  425 (431)
T ss_pred             HHHHCCcEEecCCccccCCCCCeEEEEc----CCCChHHHHHHHHHH
Confidence            788999999884211     24677753    222578899888764

>PRK10534 L-threonine aldolase; Provisional

Probab=96.47  E-value=0.027  Score=53.82  Aligned_cols=158  Identities=8%  Similarity=0.006  Sum_probs=80.9

Q ss_pred             cccceEEehhHhhchhcc---chhhhhcccCCcch-----HHHhhcCCccccc-eeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDN---GTYLGFQCLQICRF-----VQKDFKGSFWDKL-IVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRT---G~~fA~e~~GV~PD-----i~KaLgGG~~Pig-Av~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .|++++|+||... |+..   |....  ...-.+|     ++|+.+   +|+| .+++++++.+.+..  ..    ...+
T Consensus       158 ~~~~~lvvDEA~~-~~~~~~~~~~~~--~~~~~~~~~~~s~SK~~~---~~~G~~~~~~~~~i~~~~~--~~----~~~~  225 (333)
T PRK10534        158 ERNLALHVDGARI-FNAVVAYGCELK--EITQYCDSFTICLSKGLG---TPVGSLLVGNRDYIKRARR--WR----KMTG  225 (333)
T ss_pred             HcCCeEEeeHHHH-HHHHHHcCCCHH--HHHhcCCEEEEEeEcCCC---CcccceEEcCHHHHHHHHH--HH----HHhC
Confidence            4689999999755 4322   11110  0000123     679654   2678 47788998887653  11    0011


Q ss_pred             hhhhcc-HHHHHHHHh-hH-HhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          77 LKISDT-VRPHVQIKK-SV-LERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~i-le~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      ..++.+ .+.+++++. +- .+.+++..+.-++|.+.|+++    +. .-....+-++-+.+..          .....+
T Consensus       226 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~----g~-~~~~~~~nfv~~~~~~----------~~~~~~  290 (333)
T PRK10534        226 GGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREA----GA-DVMRQDTNMLFVRVGE----------EQAAAL  290 (333)
T ss_pred             CchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC----CC-ccCCCCceEEEEECCc----------hhHHHH
Confidence            112222 223333333 21 111333333334566666553    22 1111235555555431          113457


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|.++||++.++    ..+|+.-.+-   +|.+|+++++++.
T Consensus       291 ~~~l~~~gi~v~~~----~~~rl~~~~r---~t~e~~~~~~~~l  327 (333)
T PRK10534        291 GEYMRERNVLINAS----PIVRLVTHLD---VSREQLAEVVAHW  327 (333)
T ss_pred             HHHHHHcCeeecCC----ceEEEEEEeC---CCHHHHHHHHHHH
Confidence            78899999999863    3466654322   3689999999975

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=96.45  E-value=0.035  Score=53.95  Aligned_cols=159  Identities=12%  Similarity=0.080  Sum_probs=83.6

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ++++|+||+..-|.....+  .....-.|.      ++|++| .| +-+|.+++++++.+.+..  ..   ...+.++.+
T Consensus       177 ~~~vivDEay~~f~~~~s~--~~~~~~~~n~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~--~~---~~~~v~~~~  248 (351)
T PRK01688        177 KAIVVADEAYIEFCPQASL--AGWLAEYPHLVILRTLSKAFALAG-LRCGFTLANEEVINLLLK--VI---APYPLSTPV  248 (351)
T ss_pred             CcEEEEECchhhcCCCCCh--HHHHhhCCCEEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHh--cc---CCCCCCHHH
Confidence            5789999998777421111  111111233      579987 66 367888899999887753  11   011122221


Q ss_pred             ccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ...+ .++++.   +.+++ .+.+.+.-+++.+.|++    .+.+..+ ...|.++-+.+..            ...+.+
T Consensus       249 ~~~a-~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~ps~~nfi~~~~~~------------~~~l~~  311 (351)
T PRK01688        249 ADIA-AQALSPQGIAAMRERVAEINANRQWLIAALKE----IPCVEQVFDSETNYILARFTA------------SSAVFK  311 (351)
T ss_pred             HHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh----CCCCCeECCCCCcEEEEEcCC------------HHHHHH
Confidence            1122 223332   12222 23333333444444433    3322212 2234454454421            245788


Q ss_pred             HHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||+++.++.   ..+.+|+.-.      +.+|.+.+++++
T Consensus       312 ~L~~~gi~vr~~~~~~~~~~~iRis~~------~~~e~~~l~~al  350 (351)
T PRK01688        312 SLWDQGIILRDQNKQPGLSNCLRITIG------TREECQRVIDAL  350 (351)
T ss_pred             HHHHCCeEEEECCCcCCCCCeEEEeCC------CHHHHHHHHHhh
Confidence            89999999987532   2456777532      579999998764

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=96.44  E-value=0.11  Score=50.53  Aligned_cols=161  Identities=13%  Similarity=0.071  Sum_probs=89.1

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccC----------
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL----------   70 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~----------   70 (329)
                      .+|+++|+|=+|. +|..  -.-.+.+  .+|+     -| +.|+. -+|++.++++..+.+.+...+..          
T Consensus       167 ~~~~~~~vD~~~~-~g~~--~id~~~~--~~D~~~~s~~K-l~gp~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~  239 (371)
T PF00266_consen  167 EYGALLVVDAAQS-AGCV--PIDLDEL--GADFLVFSSHK-LGGPP-GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY  239 (371)
T ss_dssp             HTTSEEEEE-TTT-TTTS--S--TTTT--TESEEEEESTS-TTSSS-TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred             ccCCceeEechhc-cccc--ccccccc--ccceeeecccc-cCCCC-chhhheehhhhhhccccccccccccccccchhc
Confidence            4699999999887 5443  1233333  4682     39 88873 58999999998887743100000          


Q ss_pred             ----CC-CccchhhhccHHHHHHHHh--hHHhH--HH----HHHHHHHHHHHHHHHHHHhCCcee-----eEEeeceeeE
Q psy7882          71 ----KT-PAHKLKISDTVRPHVQIKK--SVLER--FV----HTYVVGNFLLTHLSKLREEFAIVG-----DVRGKGLMIG  132 (329)
Q Consensus        71 ----~~-~~hg~T~agnlA~aaala~--~ile~--le----~v~~lG~~L~~gL~eL~~~~p~v~-----~VRG~GLm~g  132 (329)
                          .. ...++|.  ++....++..  +.+++  ++    +..++.+++.+.|.+    .+.+.     +-...+.+..
T Consensus       240 ~~~~~~~~~~~GT~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~----~~~~~~~~~~~~~~~~~i~~  313 (371)
T PF00266_consen  240 GLADDARRFEGGTP--NVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEE----LPGIEVLGPDDEPRRPSIVS  313 (371)
T ss_dssp             CHHSTTTGSSSSS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTTEEESSSSCGGBGTTEEE
T ss_pred             ccccccccccccce--eeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhc----CCceeEeeecccccccceEE
Confidence                00 0111222  2222222222  44433  44    445555555555544    34321     1233567778


Q ss_pred             EEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-C----------CCEEEEeCccccCcCCHHHHHHH
Q psy7882         133 VDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-S----------GNTLTALQPKLLNYWTDFVGTPC  193 (329)
Q Consensus       133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~----------~nvIrl~PPL~It~~t~eeId~~  193 (329)
                      +.+.. .         -...+...|.++||.+.. |. .          +.++|+.|.+..   |++|||++
T Consensus       314 ~~~~~-~---------~~~~~~~~L~~~~I~~~~-G~~~~~~~~~~~~~~~~iRvS~~~~n---t~~dv~~l  371 (371)
T PF00266_consen  314 FNLPG-S---------DADDVVKYLEERGIAVST-GSACAGPSLDILGMGGVIRVSLHYYN---TEEDVDRL  371 (371)
T ss_dssp             EEETT-S---------SHHHHHHHHHHHTEEEEE-STTTCHHHHHHHHTTTEEEEE-GTTS---SHHHHHHH
T ss_pred             EeecC-C---------CHHHHHHHHhhcCEEEec-cCcccHHHHHHhCCCCEEEEeccCCC---CHHHHhhC
Confidence            77732 1         135688888888999887 32 2          279999988877   58999874

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK06348 aspartate aminotransferase; Provisional

Probab=96.40  E-value=0.068  Score=52.48  Aligned_cols=170  Identities=10%  Similarity=-0.015  Sum_probs=87.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhccc-CCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .++|+++|.||+...|--.+..-....+ +. +|       ++|.++ .|+ =+|.+++++++.+.+..  ... ....+
T Consensus       192 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~l~Gl-RiG~~v~~~~~~~~~~~--~~~-~~~~~  266 (384)
T PRK06348        192 IEYDLFIISDEVYDGFSFYEDFVPMATLAGM-PERTITFGSFSKDFAMTGW-RIGYVIAPDYIIETAKI--INE-GICFS  266 (384)
T ss_pred             HHCCeEEEEecccccceeCCCccchhhcCCC-cCcEEEEecchhccCCccc-cceeeecCHHHHHHHHH--HHH-hccCC
Confidence            3579999999999887422221111111 11 33       679998 774 88999999988776653  100 00112


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      +++.+. .+++.++..  +.+++ .+..++.-+++.+.|++    .+.+.-... -|+++-+.+....     ++   ..
T Consensus       267 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~----~~~~~~~~p~gg~~~~~~~~~~~-----~~---~~  333 (384)
T PRK06348        267 APTISQ-RAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES----IPNLSLHPPKGSIYAFINIKKTG-----LS---SV  333 (384)
T ss_pred             CCHHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCceeccCCeeEEEEEecccCC-----CC---HH
Confidence            222211 222333333  22222 22233333444444433    232211122 2555566653211     11   23


Q ss_pred             HHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...|+ +.||.+.++..    ..+.+|+.-  ..   +++++++.++.+
T Consensus       334 ~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~---~~~~l~~al~~l  379 (384)
T PRK06348        334 EFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TV---GIEVLEEAFNRI  379 (384)
T ss_pred             HHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence            4677776 57999987431    246788863  22   578888888764

>PRK06290 aspartate aminotransferase; Provisional

Probab=96.36  E-value=0.04  Score=55.05  Aligned_cols=177  Identities=10%  Similarity=0.011  Sum_probs=90.9

Q ss_pred             ccccceEEehhHhhchhccchhhhh-cccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..|++++|.||+...+--.+..-.+ +..+ .+|       ++|.++ .| +=+|.+++.+++++.+..  ..   ...+
T Consensus       209 ~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~-~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~--~~---~~~~  281 (410)
T PRK06290        209 KENNIIVVQDAAYAALTFDGKPLSFLSVPG-AKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFAT--VK---DNND  281 (410)
T ss_pred             HHcCeEEEEecchhhceeCCCCcChhcCCC-ccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHH--HH---hccc
Confidence            3579999999999876322211111 1111 122       679995 66 378989999999887753  11   0111


Q ss_pred             chhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .++..-. .++..+++. +.+++ .++.++.-+.+.+.|++    ++.. -.... |+++-+.+......  .....-..
T Consensus       282 ~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~p~g~f~l~v~lp~~~~~--~~~~~~~~  354 (410)
T PRK06290        282 SGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGFK-AEMPGGTFYLYVKAPKGTKS--GIKFENAE  354 (410)
T ss_pred             cCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCCe-ecCCCeeeEEEEECCCcccc--CCCCCCHH
Confidence            1211122 334444544 44433 33444444455555543    3321 11222 45555666421100  00001134


Q ss_pred             HHHHHHHHCCcee-eccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLL-GRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl-~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|+++|+++ .|....++.+|+.=.  ..++++++-+++++++
T Consensus       355 ~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~--~~~~~~~~~~~~~~~l  399 (410)
T PRK06290        355 EFSQYLIKEKLISTVPWDDAGHFLRFSVT--FEAKDEEEEDRILEEI  399 (410)
T ss_pred             HHHHHHHHhCCEEEECCccccCeEEEEEE--cccccccchhHHHHHH
Confidence            6888898886544 443223457887533  2344678888888875

>PRK06207 aspartate aminotransferase; Provisional

Probab=96.34  E-value=0.082  Score=52.54  Aligned_cols=170  Identities=11%  Similarity=0.039  Sum_probs=91.5

Q ss_pred             cccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .||+++|.||+..-|-..|..+ ....+...+|       ++|.++ .|+ =+|.+++++++.+.+..  ... ....+.
T Consensus       209 ~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl-RiG~ii~~~~l~~~~~~--~~~-~~~~~~  284 (405)
T PRK06207        209 RYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY-RLGVAFGSPAIIDRMEK--LQA-IVSLRA  284 (405)
T ss_pred             HcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCccc-ceEEEEcCHHHHHHHHH--HHh-HhccCC
Confidence            5799999999998774334211 1112233455       579998 774 89999999998887753  110 001111


Q ss_pred             hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++++. .++.++++.  ..+++ .+...+.-+.+.+.|    ++++.+.-. ..-|+++.+++....     .+   ...
T Consensus       285 ~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L----~~~~~~~~~~p~gg~fl~~~l~~~~-----~~---~~~  351 (405)
T PRK06207        285 AGYSQ-AVLRTWFSEPDGWMKDRIARHQAIRDDLLRVL----RGVEGVFVRAPQAGSYLFPRLPRLA-----VS---LHD  351 (405)
T ss_pred             CHHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH----hcCCCceecCCCeeEEEEEeCcccC-----CC---HHH
Confidence            22211 333444443  23333 333333333333333    333322212 223677777774211     01   245


Q ss_pred             HHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...|. ++||++.++..    .++.+|+.  +..   +++++++.++..
T Consensus       352 ~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris--~~~---~~~~l~~al~rl  396 (405)
T PRK06207        352 FVKILRLQAGVIVTPGTEFSPHTADSIRLN--FSQ---DHAAAVAAAERI  396 (405)
T ss_pred             HHHHHHHhcCEEEeCchHhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            777776 68999988531    24678875  222   468888888764

>PRK02948 cysteine desulfurase; Provisional

Probab=96.31  E-value=0.036  Score=54.12  Aligned_cols=167  Identities=10%  Similarity=0.022  Sum_probs=85.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..+|+++|+|++++ ||....  ..+.++  .|     ..|.+|  ..-+|++.+++++ +.....  .........++|
T Consensus       165 ~~~~~~vivD~~~~-~g~~~~--~~~~~~--~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~--~~~~~~~~~~~t  235 (381)
T PRK02948        165 KKYNVLFHSDCVQT-FGKLPI--DVFEMG--IDSLSVSAHKIYG--PKGVGAVYINPQVRWKPVFP--GTTHEKGFRPGT  235 (381)
T ss_pred             HHcCCEEEEEChhh-cccccc--CcccCC--CCEEEecHHhcCC--CCcEEEEEEcCCCCCCCccc--CCCCCCCcCCCC
Confidence            35689999999876 654321  122333  46     459653  1126777777765 211110  000000011222


Q ss_pred             hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-----eceeeEEEeecCCCCCCCCChH
Q psy7882          79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-----KGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-----~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+..  .++.++++.  +.+++ .++++++.++|.++|+++  ..+..  ..+     ...+.++.+..       .+  
T Consensus       236 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~v~--~~~~~~~~~~~i~~~~~~~-------~~--  302 (381)
T PRK02948        236 VNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL--PLPIE--VEGHSTSCLPHIIGVTIKG-------IE--  302 (381)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCEE--EeCCCccCcCCEEEEEeCC-------CC--
Confidence            2111  333334332  22222 567777777777777665  11211  111     11233333321       01  


Q ss_pred             HHHHHHHHHHHCCceeeccCC---------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL---------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~---------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+...|.++||.++.+..                     ..+.+|+.+....   |++|+|.+++++
T Consensus       303 -~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~---t~~di~~l~~~l  368 (381)
T PRK02948        303 -GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQT---TKDQIDTTIHAL  368 (381)
T ss_pred             -HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCC---CHHHHHHHHHHH
Confidence             23466677889999985220                     1368999976554   689999999986

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=96.25  E-value=0.1  Score=51.07  Aligned_cols=160  Identities=13%  Similarity=0.022  Sum_probs=89.7

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +++++|.||+...|......  ....+-.|.      ++|.++ .|+ =+|.+++.+++.+.+..  ..   ...+.++.
T Consensus       183 ~~~~iI~Deay~~f~~~~~~--~~~~~~~~~vi~~~SfSK~~gl~Gl-RvGy~v~~~~l~~~l~~--~~---~~~~~~~~  254 (364)
T PRK04781        183 GKALVVVDEAYGEFSDVPSA--VGLLARYDNLAVLRTLSKAHALAAA-RIGSLIANAELIAVLRR--CQ---APYPVPTP  254 (364)
T ss_pred             CCcEEEEeCcchhhcCCcch--HHHHhhCCCEEEEecChhhcccccc-eeeeeeCCHHHHHHHHh--cc---CCCCCCHH
Confidence            47899999998877421111  111122233      679998 784 89999999999988764  11   11122222


Q ss_pred             hccHHHHHHHHhh---HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDTVRPHVQIKKS---VLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agnlA~aaala~~---ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +..++. +++...   .+.+ +..+.+.-+++.+.|+    +++.+. .....|.++-+++..            ...+.
T Consensus       255 ~~~~a~-~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~~g~f~~~~~~~------------~~~~~  317 (364)
T PRK04781        255 CAALAE-QALSAPALAVTARRVAEVRAERERLHAALA----QLPGVRRVYPSQGNFLLVRFDD------------AEAAF  317 (364)
T ss_pred             HHHHHH-HHHhcccHHHHHHHHHHHHHHHHHHHHHHH----hCCCCCeECCCCCcEEEEEcCC------------HHHHH
Confidence            222222 334331   2211 2333333344444443    343322 233457777776631            23577


Q ss_pred             HHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||+++++..   .++.+|+.    +.  +.++.+.++++.
T Consensus       318 ~~l~~~gI~v~~~~~~~~~~~~~Ris----~~--~~~~~~~l~~al  357 (364)
T PRK04781        318 QALLAAGVVVRDQRAAPRLSDALRIT----LG--TPEQNDRVLAAL  357 (364)
T ss_pred             HHHHHCCeEEeeCCCCCCCCCeEEEe----CC--CHHHHHHHHHHH
Confidence            888999999988631   24567764    22  578889998875

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=96.23  E-value=0.14  Score=50.14  Aligned_cols=161  Identities=14%  Similarity=0.062  Sum_probs=85.0

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhh-cCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+++++|.||+...|......   ....-.|.      ++|.+ ..| +-+|.+++++++.+.+..  ..   ...+.++
T Consensus       197 ~~~~~iI~De~Y~~~~~~~~~---~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~--~~---~~~~~~~  267 (374)
T PRK02610        197 PEDILVVIDEAYFEFSQTTLV---GELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEK--VR---LPYNLPS  267 (374)
T ss_pred             cCCcEEEEeccccccCccchH---HHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHH--hc---CCCCCCH
Confidence            358999999999877321111   11111122      67999 477 489999999999887764  11   1112222


Q ss_pred             hhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC  157 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l  157 (329)
                      ++. .++.+++.. +.+  .++++..-+. +..+.+..++++.+.-.-.-|.++-+++...      .   -...+++.|
T Consensus       268 ~~q-~a~~~~l~~~~~~--~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~------~---~~~~~~~~l  334 (374)
T PRK02610        268 FSQ-LAAQLALEHRQEL--LAAIPEILQE-RDRLYQALQELPQLRVWPSAANFLYLRLSQD------A---ALAALHQAL  334 (374)
T ss_pred             HHH-HHHHHHhcCHHHH--HHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcceEEEEeCCCC------C---CHHHHHHHH
Confidence            221 223333433 222  2223322222 2333333334443321223466666666321      1   134577888


Q ss_pred             HHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         158 KEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       158 ~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++||++.++   .+.+||.  +  .  +.++++++++..
T Consensus       335 ~~~gi~v~~~---~~~lRls--~--~--~~~~~~~~l~~l  365 (374)
T PRK02610        335 KAQGTLVRHT---GGGLRIT--I--G--TPEENQRTLERL  365 (374)
T ss_pred             HHCCEEEEeC---CCeEEEe--C--C--CHHHHHHHHHHH
Confidence            8999999763   4678875  2  2  246778888764

>PRK08960 hypothetical protein; Provisional

Probab=96.22  E-value=0.097  Score=51.39  Aligned_cols=168  Identities=13%  Similarity=0.037  Sum_probs=85.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|.||+...+-..+..  .....+.|+      ++|.++ .| +-+|.+++++++.+.+..  ... ......+
T Consensus       195 ~~~~~~li~De~Y~~~~~~~~~--~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~--~~~-~~~~~~s  268 (387)
T PRK08960        195 RARGGHLVVDEIYHGLTYGVDA--ASVLEVDDDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEK--LAQ-NLYISAS  268 (387)
T ss_pred             HHcCCEEEEEccccccccCCCC--CChhhccCCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHH--HHh-hhccCCC
Confidence            3579999999999877322221  112334455      579996 77 489999999998887653  110 0011112


Q ss_pred             hhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          78 KISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        78 T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      +++. .++.+++..   +.+++ .+..++.-+.+.+.|    +.++....+ ..-|+++-+++....     .+   ...
T Consensus       269 ~~~q-~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L----~~~~~~~~~~p~g~~f~~~~~~~~~-----~~---~~~  335 (387)
T PRK08960        269 TPAQ-HAALACFEPETLAILEARRAEFARRRDFLLPAL----RELGFGIAVEPQGAFYLYADISAFG-----GD---AFA  335 (387)
T ss_pred             HHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHH----HhcCCcCCcCCCeeEEEEEeccccC-----CC---HHH
Confidence            2221 222333332   22222 122222233333333    334432212 223666677764211     01   245


Q ss_pred             HHHHHH-HCCceeecc---CC--CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         153 ILDSCK-EHGLLLGRG---GL--SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       153 ~~~~l~-e~GVLl~~~---G~--~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      +...+. ++||++.|+   +.  .++.+|+.-.  .   +.+++.+.++.
T Consensus       336 ~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~---~~~~l~~al~~  380 (387)
T PRK08960        336 FCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--Q---SLPRLQEAVER  380 (387)
T ss_pred             HHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--C---CHHHHHHHHHH
Confidence            677765 689999874   11  2357777532  1   35677776664

>PLN00175 aminotransferase family protein; Provisional

Probab=96.21  E-value=0.098  Score=52.23  Aligned_cols=171  Identities=9%  Similarity=-0.050  Sum_probs=90.4

Q ss_pred             ccccceEEehhHhhchhccchhhhh-cccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..||+++|.||+...+-..+..... +..+..+.      ++|.++ .| +-+|.+++++++.+.+..  .... ...+.
T Consensus       217 ~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~--~~~~-~~~~~  292 (413)
T PLN00175        217 KENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQ--AHSF-LTFAT  292 (413)
T ss_pred             HHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcc-hheeeeEeCHHHHHHHHH--HHhh-ccCCC
Confidence            3579999999999877433321111 11122121      679998 77 489999999998887653  1100 01111


Q ss_pred             hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      +++.. .+++++++.  ..+++ .++.++.-+.+.+.|++    ++. .-.... |+++-+.+....     ++  -...
T Consensus       293 s~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~p~g~~f~~~~~~~~~-----~~--~~~~  359 (413)
T PLN00175        293 ATPMQ-WAAVAALRAPESYYEELKRDYSAKKDILVEGLKE----VGF-KVYPSSGTYFVMVDHTPFG-----FE--NDIA  359 (413)
T ss_pred             CHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eecCCCeeEEEEEeccccC-----CC--CHHH
Confidence            22211 344455544  23333 33444444555555544    332 112222 444555542110     10  1245


Q ss_pred             HHHHHH-HCCceeeccC-------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCK-EHGLLLGRGG-------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~-e~GVLl~~~G-------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...|+ ++||.+.|..       ...+.+||.-  ..   +++++++.++.+
T Consensus       360 ~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~--~~---~~e~l~~~~~rL  407 (413)
T PLN00175        360 FCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF--CK---DEETLRAAVERM  407 (413)
T ss_pred             HHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE--cC---CHHHHHHHHHHH
Confidence            777776 5799998742       1235788753  22   578999988864

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=96.16  E-value=0.095  Score=50.73  Aligned_cols=168  Identities=6%  Similarity=-0.122  Sum_probs=84.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|.||+..-+...+.......+  .+|       ++|.++ .| +=+|.+++++++.+.+..  ... ....++
T Consensus       166 ~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~--~~~-~~~~~~  239 (350)
T TIGR03537       166 REHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRK--LRA-NFGVAS  239 (350)
T ss_pred             HHcCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHH--HHH-hhccCC
Confidence            3579999999997644211111111111  233       569874 45 367888888888877653  110 001111


Q ss_pred             hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++.+. .++.+++.. +.+++ ..++++..+.+.+.|++    ++.....-.-|+++.+++....         ....+.
T Consensus       240 ~~~~q-~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~----~g~~~~~~~g~~~~~~~~~~~~---------~~~~l~  305 (350)
T TIGR03537       240 PDFVQ-AAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNK----VGLEYLYPDATFYLWVKVPSGI---------DAKDYA  305 (350)
T ss_pred             CHHHH-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeEEEEEEECCCCC---------CHHHHH
Confidence            11111 111122322 33322 23344444444444433    3321111122556667764210         134688


Q ss_pred             HHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.++..    ..+.+|+.  +..   +++++.+.++..
T Consensus       306 ~~L~~~gv~v~~g~~f~~~~~~~~Ri~--~~~---~~~~~~~~l~~~  347 (350)
T TIGR03537       306 LRLLENGIVVAPGENFGSGEEGYVRVA--LVP---TLEECEEALRLW  347 (350)
T ss_pred             HHHHHCCEEEcCchhhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence            888999999987421    14668874  222   478888888753

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=96.14  E-value=0.13  Score=49.91  Aligned_cols=173  Identities=10%  Similarity=0.009  Sum_probs=89.4

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC-C------CC
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-K------TP   73 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~------~~   73 (329)
                      .+|+++|+|.++ +||..  -.....  ..+|     ..|.+.|.. .+|.+.+++++.+.+........ .      ..
T Consensus       159 ~~~~~livDa~~-~~g~~--~~~~~~--~~~d~~v~s~~K~l~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (368)
T PRK13479        159 RHGKRLIVDAMS-SFGAI--PIDIAE--LGIDALISSANKCIEGVP-GFGFVIARRSELEACKGNSRSLSLDLYDQWAYM  232 (368)
T ss_pred             HcCCEEEEEccc-ccCCc--cccccc--cCceEEEecCccccccCC-CceEEEECHHHHHHhhcCCCCeeecHHHHHhhh
Confidence            468999999887 46532  122222  2367     249887652 46889999988776543100000 0      00


Q ss_pred             cc-c-hhhhcc----HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEeecCCCC
Q psy7882          74 AH-K-LKISDT----VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        74 ~h-g-~T~agn----lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef~~d~~~  141 (329)
                      .+ + ..|+.+    .+..++++.    ..+++ .++..++.+++++.|+++  ....+.. ....+.+..+.+...+  
T Consensus       233 ~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~--  308 (368)
T PRK13479        233 EKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL--GFEPLLDAEIQSPIIVTFHAPADP--  308 (368)
T ss_pred             cccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCcccCCchhcCceEEEEECCCCC--
Confidence            00 0 012223    222333321    11233 456666667777766654  1111111 0111223344332111  


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                        +.+   ...+.+.|.++||++.++.. ..+.+|+.. .+    .+++|++.+++++
T Consensus       309 --~~~---~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~----~t~edi~~~l~~L  357 (368)
T PRK13479        309 --AYD---FKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGD----VDAADIRRLVAAI  357 (368)
T ss_pred             --CcC---HHHHHHHHHHCCEEEecCCCCCCCEEEEecCCC----CCHHHHHHHHHHH
Confidence              011   34688899999999986421 135788864 33    2589999999985

>PRK07777 aminotransferase; Validated

Probab=96.11  E-value=0.086  Score=51.68  Aligned_cols=166  Identities=10%  Similarity=-0.068  Sum_probs=90.1

Q ss_pred             cccceEEehhHhhchhccch-hhhhccc-CCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGT-YLGFQCL-QICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~-~fA~e~~-GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+++++|.||+..++.-.+. ......+ +... +     ++|.++ .| +-+|.+++++++.+.+..  .      .+.
T Consensus       190 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~--~------~~~  260 (387)
T PRK07777        190 EHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRA--A------KQY  260 (387)
T ss_pred             hcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHH--H------Hhh
Confidence            57899999999987743232 1111111 1211 2     579998 67 489999999988877653  1      111


Q ss_pred             hhhhcc----HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT----VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn----lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .++..+    .+++.++..  +.+++ .+.+++..+.+.+.|+++    +. .-.... |+++.+.+...+.       .
T Consensus       261 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~g~~~~~~~~~~~~~-------~  328 (387)
T PRK07777        261 LTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA----GF-EVHDSAGTYFLCADPRPLGY-------D  328 (387)
T ss_pred             cccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC----CC-CccCCCcceEEEecccccCC-------C
Confidence            122222    233334433  33333 345666666666666553    21 111112 4445556532110       0


Q ss_pred             HHHHHHHHHH-HCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      -...+...|. ++||++.++..       ..+.+||.  +..   +++++++.++..
T Consensus       329 ~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~--~~~---~~~~l~~~l~~l  380 (387)
T PRK07777        329 DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA--FCK---RDDTLDEAIRRL  380 (387)
T ss_pred             CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            1345778886 58999987421       13467774  322   478888888764

>PRK07681 aspartate aminotransferase; Provisional

Probab=96.10  E-value=0.11  Score=51.29  Aligned_cols=169  Identities=7%  Similarity=-0.017  Sum_probs=89.0

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .++|+++|.||+...|-..+.- -....+.-.+|       ++|.++ .|+ =+|.+++++++.+.+..  ... ....+
T Consensus       196 ~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~~i~~~~l~~~~~~--~~~-~~~~~  271 (399)
T PRK07681        196 KKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS-RIGYMIGNEEIVRALTQ--FKS-NTDYG  271 (399)
T ss_pred             HHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccc-eeEEEecCHHHHHHHHH--HHh-hcccC
Confidence            3579999999999877322211 01111110123       579996 774 78989999999887753  110 00111


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .+..+ ..++.+++..  +.+++ .+..++.-+.+.+.|++    ++. .-... -|.++-+.+...      +   ...
T Consensus       272 ~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~p~~g~f~~~~l~~~------~---~~~  336 (399)
T PRK07681        272 VFLPI-QKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT----FGW-NVDKPAGSMFVWAEIPKG------W---TSL  336 (399)
T ss_pred             CCHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCCeeeEEEEECCCC------C---CHH
Confidence            11111 1344455544  23332 22333444444444433    332 11112 266666666321      1   124


Q ss_pred             HHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...+.+ +||++.++..    ..+.+|+.  +.   .++++++++++..
T Consensus       337 ~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~---~~~~~~~~~l~~l  382 (399)
T PRK07681        337 SFAYALMDRANVVVTPGHAFGPHGEGFVRIA--LV---QDEEVLQQAVENI  382 (399)
T ss_pred             HHHHHHHHhCCEEEeCChhhCcCCCCeEEEE--ec---CCHHHHHHHHHHH
Confidence            57777776 8999987421    23567774  22   2578999999874

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=96.09  E-value=0.13  Score=50.04  Aligned_cols=166  Identities=11%  Similarity=0.033  Sum_probs=85.1

Q ss_pred             ccccceEEehhHhhchhccchhhhh---cccC------Ccch-HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF---QCLQ------ICRF-VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~---e~~G------V~PD-i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..||+++|.||+...|...+.....   +..+      |.-. ++|.++ .| +=+|.+++++++.+.+..  .... ..
T Consensus       172 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~--~~~~-~~  247 (357)
T TIGR03539       172 RERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLT--VRKH-AG  247 (357)
T ss_pred             HHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHH--HHhh-cc
Confidence            3579999999999877543322111   0011      1111 679873 55 367888888888877653  1100 01


Q ss_pred             ccchhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882          74 AHKLKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        74 ~hg~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      ...++.+. .+++++++. +.+++ ..+.++.-+++.+.|++    ++.. -.... |+++-+.+..           ..
T Consensus       248 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~----~g~~-~~~p~~~~~~~~~~~~-----------~~  310 (357)
T TIGR03539       248 LMVPAPVQ-AAMVAALGDDGHVAEQKARYAARRAQLKPALEK----AGFR-IDHSEAGLYLWATRGE-----------DA  310 (357)
T ss_pred             cCCCHHHH-HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCC-CcCCCccEEEEEECCC-----------CH
Confidence            11111111 233444443 33322 23334444445454443    3321 11122 4444444321           12


Q ss_pred             HHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         151 THILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      ..+.+.|.++||.+.++..    ..+.+|+.-  ..   +++++++.++.
T Consensus       311 ~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~---~~~~i~~~~~~  355 (357)
T TIGR03539       311 WDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TA---TDERIAAAVAR  355 (357)
T ss_pred             HHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cC---CHHHHHHHHHh
Confidence            3477788899999988531    246788763  22   46888888864

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=96.07  E-value=0.15  Score=49.85  Aligned_cols=166  Identities=10%  Similarity=0.008  Sum_probs=83.9

Q ss_pred             cccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .||+++|.||+...+...+.. -....+.-..+       ++|.++ .| +=+|.+++++++.+.+..  ...   ....
T Consensus       195 ~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~--~~~---~~~~  268 (383)
T TIGR03540       195 EYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGK--VKT---NVDS  268 (383)
T ss_pred             HcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHH--HHH---hccc
Confidence            568999999999866432211 11111110112       679995 56 378999999999887653  110   0111


Q ss_pred             hhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882          77 LKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        77 ~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      ++..-. .++++++..  +.+++ .+..++.-+.+.+.|+    +++. .-+.. -|+++-+.+.+.      +   ...
T Consensus       269 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~-~~~~~~~~~~~~~~l~~~------~---~~~  334 (383)
T TIGR03540       269 GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALK----KIGI-DVEKPKATFYVWVPVPEG------Y---TSA  334 (383)
T ss_pred             CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH----hCCC-EecCCCcceEEEEECCCC------C---CHH
Confidence            111112 333444443  33322 2223333333444443    3432 11122 255566666321      1   134


Q ss_pred             HHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         152 HILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       152 ~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      .+...|+ ++||++.++..    ..+.+|+.=  ..   +++++.+.++.
T Consensus       335 ~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~---~~~~l~~~l~~  379 (383)
T TIGR03540       335 EFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TV---PDERLEEAVAR  379 (383)
T ss_pred             HHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cC---CHHHHHHHHHH
Confidence            5777765 68999987521    135678752  22   46777777765

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=95.94  E-value=0.16  Score=49.27  Aligned_cols=162  Identities=7%  Similarity=-0.005  Sum_probs=83.0

Q ss_pred             cccceEEehhHhhchhccchhh--hhcccCCcch-----HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL--GFQCLQICRF-----VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f--A~e~~GV~PD-----i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+|+++|.||+...|-..+..+  ....+  ...     ++|.++ .|+ -+|.+++. +++.+.+..  ..   .....
T Consensus       173 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~~~~G~-RiG~~v~~~~~~~~~l~~--~~---~~~~~  244 (356)
T PRK08056        173 SLNIALILDEAFIDFIPDETGFIPQLADN--PHLWVLRSLTKFYAIPGL-RLGYLVNSDDAAVARMRR--QQ---MPWSI  244 (356)
T ss_pred             hcCCEEEEecchhccCCcchHHHHHhccC--CCEEEEEechhhccCcch-hheeeecCCHHHHHHHHH--hC---CCCch
Confidence            4689999999988774323111  11111  112     579999 784 89988874 566665542  11   01112


Q ss_pred             hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++++. .+..+++.. +.+++ .+.+++.-+++.+.|++    .+.+.-....|..+-+.+..+           ...+.
T Consensus       245 ~~~~~-~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  308 (356)
T PRK08056        245 NAFAA-LAGEVILQDRAYQQATWQWLAEEGARFYQALCA----LPLLTVWPGRANYLFLRCERP-----------DIDLQ  308 (356)
T ss_pred             hHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEcCCCCcEEEEEcCCC-----------hHHHH
Confidence            22211 222223322 22222 23344444444444443    322211122344444444210           23578


Q ss_pred             HHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.++..    .++.+|+.-    .  +.++.+.+++++
T Consensus       309 ~~l~~~gI~v~~~~~f~~~~~~~iRis~----~--~~~~~~~l~~~l  349 (356)
T PRK08056        309 RALLTQRILIRSCANYPGLDSRYYRVAI----R--SAAENERLLAAL  349 (356)
T ss_pred             HHHHHCCeEEEECCCCCCCCCCEEEEEE----c--CHHHHHHHHHHH
Confidence            888899999987532    135677752    1  467778877764

>PRK09082 methionine aminotransferase; Validated

Probab=95.92  E-value=0.13  Score=50.48  Aligned_cols=172  Identities=9%  Similarity=-0.081  Sum_probs=88.6

Q ss_pred             ccccceEEehhHhhchhccchh--hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY--LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~--fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|.||+...+--.+..  ......++.+-      ++|.++ .| +-+|.+++.+++++.+..  ... ....|
T Consensus       193 ~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~--~~~-~~~~~  268 (386)
T PRK09082        193 AGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRK--VHQ-YNTFT  268 (386)
T ss_pred             HHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh-hhhhhhhCCHHHHHHHHH--HHh-hhcCC
Confidence            3579999999998655322211  11112222221      679996 66 488999999999887764  110 00122


Q ss_pred             chhhhccHHHHHHHH-h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          76 KLKISDTVRPHVQIK-K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        76 g~T~agnlA~aaala-~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      .++.+. .++++.+. . +.+++ .+..++.-+.+.+.|++    ++.....-.-|+++.+.+.+-..    .+   ...
T Consensus       269 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~g~~~~~~~~~~~~~----~~---~~~  336 (386)
T PRK09082        269 VNTPAQ-LALADYLRAEPEHYLELPAFYQAKRDRFRAALAN----SRFKLLPCEGTYFQLVDYSAISD----LD---DVE  336 (386)
T ss_pred             CChHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCeeEEEEEeccccCC----CC---HHH
Confidence            222211 23334444 2 33322 22334444445555543    33211112236667777742010    11   234


Q ss_pred             HHHHH-HHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSC-KEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l-~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...+ .++||++.|...      ..+.+|+.-  ..   +++++++.++..
T Consensus       337 ~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~--~~---~~~~l~~~~~rl  383 (386)
T PRK09082        337 FCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF--AK---QEETLDAAAERL  383 (386)
T ss_pred             HHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe--cC---CHHHHHHHHHHH
Confidence            66655 578999987531      135788763  22   478888888753

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=95.83  E-value=0.087  Score=51.48  Aligned_cols=171  Identities=11%  Similarity=-0.007  Sum_probs=91.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchHH---HhhcCCccc-cceeeechhHHHhhhhhhhccC------CCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFVQ---KDFKGSFWD-KLIVHTSTCTFENFIKIKYQIL------KTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi~---KaLgGG~~P-igAv~~~~eI~d~~~~~~~~~~------~~~~   74 (329)
                      ..||+++|+|=||+ +|-.  -.-.+.+++  +++   |.+  | .| +|++.+++++.+.+.+......      ....
T Consensus       160 ~~~g~~~~VDa~qs-~g~~--~idv~~~~~--~~ss~~K~l--G-P~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (355)
T cd00611         160 DTGGVPLVADMSSN-ILSR--PIDVSKFGV--IYAGAQKNL--G-PAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNS  231 (355)
T ss_pred             ccCCCeEEEEcccc-ccCC--CCCHHHhCE--EEeeccccc--C-CCceEEEEECHHHHhhcccCCCCcccHHHHHhcCC
Confidence            34799999999998 3321  222333443  432   865  3 35 7999999988865432000000      0000


Q ss_pred             cchhhhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCC
Q psy7882          75 HKLKISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        75 hg~T~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~  145 (329)
                      ..+|-+-.  .++.++++-  +.  ++. .++.+++.++|+++|+++-.=+....  ..| .+.++++.+...       
T Consensus       232 ~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r-s~~vvsf~~~~~-------  303 (355)
T cd00611         232 LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR-SRMNVPFRLGKE-------  303 (355)
T ss_pred             CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc-CceEEEEEcCCh-------
Confidence            01122111  344444432  11  333 55666777777777776521111111  112 234456554321       


Q ss_pred             ChHHHHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        .....+...+.++|+. .+.++. ..++|+.+-.-.   |++|||.+++++
T Consensus       304 --~l~~~~~~~~~r~G~~-~~~~~~~~g~vR~S~~~~n---t~edi~~l~~al  350 (355)
T cd00611         304 --ELEKEFLKEAEAAGMI-GLKGHRSVGGIRASIYNAL---SLEGVQALADFM  350 (355)
T ss_pred             --hhhHHHHHHHHHCCCc-ccCCCcccCeEEEEccCCC---CHHHHHHHHHHH
Confidence              1224455678889997 444432 478999985544   689999999986

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK08912 hypothetical protein; Provisional

Probab=95.81  E-value=0.22  Score=48.81  Aligned_cols=172  Identities=10%  Similarity=-0.071  Sum_probs=87.8

Q ss_pred             ccccceEEehhHhhchhccchhh-h-hcccCCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-G-FQCLQICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A-~e~~GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..|++++|.||+...+--.|.-+ . .+..+..+ +     ++|.++ .|+ -+|.+++++++.+.+..  ... ....+
T Consensus       189 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~l~~--~~~-~~~~~  264 (387)
T PRK08912        189 QRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KVGFVCAAPPLLRVLAK--AHQ-FLTFT  264 (387)
T ss_pred             HHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc-eeEEEecCHHHHHHHHH--HHh-hcccc
Confidence            45799999999987653222110 0 11112211 2     579998 884 88999999999887753  110 00011


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .+.... .++++++..  +.+++ .++.++.-+++.+.|++    ++. .-... -|+++.+.+.....   +   .-..
T Consensus       265 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~g~~~l~~~l~~~~~---~---~~~~  332 (387)
T PRK08912        265 TPPNLQ-AAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR----IGF-PVLPSQGTYFLTVDLAPLGL---A---EDDV  332 (387)
T ss_pred             CChHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCC-cccCCCcceEEEecccccCC---C---CCHH
Confidence            111111 223333332  33333 33445555555555544    332 11112 25566666642110   0   0124


Q ss_pred             HHHHHHH-HCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCK-EHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~-e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.+. ++||++.+...      ..+.+|+.  +..   .++++++.++..
T Consensus       333 ~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~--~~~---~~~~l~~~l~rl  380 (387)
T PRK08912        333 AFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFC--FAK---RDATLDEAVERL  380 (387)
T ss_pred             HHHHHHHhcCCEEEecchhhCCCCCCCCEEEEE--EeC---CHHHHHHHHHHH
Confidence            5777765 57999987421      13677775  222   467888887753

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=95.71  E-value=0.31  Score=47.25  Aligned_cols=158  Identities=14%  Similarity=0.059  Sum_probs=82.4

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      +.++|.||+...|.  |.-.. ....-.+.      ++|.++ .|+ -+|.+++++++.+.+..  ..   .....++++
T Consensus       178 ~~~~ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~~~~~~~~~~--~~---~~~~~~~~~  248 (351)
T PRK14807        178 RGIVVVDEAYFEFY--GNTIV-DVINEFENLIVLRTLSKAFGLAGL-RVGYAVANENILKYLNL--VK---SPYNINSLS  248 (351)
T ss_pred             CCEEEEeCcchhhc--ccchH-HHhhhCCCEEEEecchHhcccchh-ceeeeecCHHHHHHHHH--cc---CCCCcCHHH
Confidence            56789999997773  32111 11111122      679997 784 89999999999887763  11   011111111


Q ss_pred             ccHHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHH
Q psy7882          81 DTVRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE  159 (329)
Q Consensus        81 gnlA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e  159 (329)
                      . .+..++++...+++ .+...+.-+++.+.|+    +.+.+.-...-|.++-+.+..            ...+.+.|.+
T Consensus       249 q-~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~----~~~g~~~~~~~~~~~~i~~~~------------~~~~~~~l~~  311 (351)
T PRK14807        249 Q-VIALKVLRTGVLKERVNYILNERERLIKELS----KIPGIKVYPSKTNFILVKFKD------------ADYVYQGLLE  311 (351)
T ss_pred             H-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECcCCccEEEEEcCC------------HHHHHHHHHH
Confidence            1 22233333322322 3333333333444433    333222122335555455531            2457888889


Q ss_pred             CCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         160 HGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       160 ~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +||++.+.+.   ..+.+|+.-.      +.++.+.++++.
T Consensus       312 ~gV~v~~~~~~~~~~~~iRis~~------~~~~~~~l~~~l  346 (351)
T PRK14807        312 RGILVRDFSKVEGLEGALRITVS------SCEANDYLINGL  346 (351)
T ss_pred             CCEEEEECCCCCCCCCeEEEEcC------CHHHHHHHHHHH
Confidence            9999977431   2356777521      356777777764

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=95.69  E-value=0.32  Score=47.94  Aligned_cols=174  Identities=13%  Similarity=-0.001  Sum_probs=90.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhcc----------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQI----------   69 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~----------   69 (329)
                      ..||+++|+|=+|+ +|-.  -+-.+  .+  |+     -|.|+|-. -+|.+.++++..+.+.+...+.          
T Consensus       161 ~~~g~~~vVDa~qs-~G~~--pidv~--~i--D~~~~s~~K~l~~P~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~  232 (378)
T PRK03080        161 ADREGLTICDATSA-AFAL--PLDWS--KL--DVYTFSWQKVLGGEG-GHGMAILSPRAVERLESYTPARPIPKFFRLTK  232 (378)
T ss_pred             ccCCCeEEEecccc-cccC--CCCHH--HC--cEEEEehhhhCCCCC-ceEEEEECHHHHHhhhcccCCCCCchhheecc
Confidence            35789999999887 4322  11222  22  72     29987631 3799999999887654310000          


Q ss_pred             ----CCCCccchhhh-cc-HHH---HHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEE
Q psy7882          70 ----LKTPAHKLKIS-DT-VRP---HVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGV  133 (329)
Q Consensus        70 ----~~~~~hg~T~a-gn-lA~---aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gI  133 (329)
                          ......+.|+. .+ .+.   .++++-  +  -++. .++.+++.++++++|+++-.-....  ...|+ +.+.++
T Consensus       233 ~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s-~~i~~~  311 (378)
T PRK03080        233 GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRS-NTSVTL  311 (378)
T ss_pred             chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccC-ccEEEE
Confidence                00001112221 22 222   333332  1  1222 4455666666666665442100110  01122 346666


Q ss_pred             EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.. .      +......+...+.++|+++...++  ..+++|+.|-.-.   +++|||.+++++
T Consensus       312 ~~~~-~------~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~---t~~di~~l~~al  367 (378)
T PRK03080        312 DFVD-A------QAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTV---EPADVEALTPWL  367 (378)
T ss_pred             EcCC-c------hHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCC---CHHHHHHHHHHH
Confidence            6532 0      001223466667778888765332  2478999987665   589999999986

>PLN02409 serine--glyoxylate aminotransaminase

Probab=95.68  E-value=0.24  Score=49.23  Aligned_cols=174  Identities=13%  Similarity=0.031  Sum_probs=92.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCC-------
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK-------   71 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~-------   71 (329)
                      -..+|+++|+|+||+ +|.    ..........|     ..|.+++.. -+|.+..+++..+.+.+.......       
T Consensus       165 ~~~~g~~~vvD~v~s-~g~----~~id~~~~~~D~~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (401)
T PLN02409        165 CAQHPALLLVDGVSS-IGA----LDFRMDEWGVDVALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPRVFFDWADYL  238 (401)
T ss_pred             hhccCcEEEEEcccc-cCC----ccccccccCccEEEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCCeecCHHHHH
Confidence            346799999999986 432    11111122346     239998752 478899999888765430000000       


Q ss_pred             CCccch---hhhcc----HHHHHHHHh--h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-Ee-eceeeEEEeecC
Q psy7882          72 TPAHKL---KISDT----VRPHVQIKK--S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RG-KGLMIGVDLVQD  138 (329)
Q Consensus        72 ~~~hg~---T~agn----lA~aaala~--~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG-~GLm~gIef~~d  138 (329)
                      .+...+   .++.+    .++.++++-  + -+++ .++.+++.++++++|+++  ....+..- .. .+.+..+.+...
T Consensus       239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--g~~~~~~~~~~~s~~v~~~~~p~~  316 (401)
T PLN02409        239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--GLKLCTKKPEWRSDTVTAVVVPEG  316 (401)
T ss_pred             HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcccceEEEeCCCC
Confidence            000011   12333    233333332  1 1222 456677777777777654  12222211 11 233445554321


Q ss_pred             CCCCCCCChHHHHHHHHHHH-HCCceeecc-CC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCK-EHGLLLGRG-GL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~-e~GVLl~~~-G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                            ++   ...+.+.+. ++|+.+... +. .+.++|+..---+   +.+|+..+++++
T Consensus       317 ------~~---~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~---~~~~~~~~~~~~  366 (401)
T PLN02409        317 ------ID---SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNV---NELQLLGALAGV  366 (401)
T ss_pred             ------CC---HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCC---CHHHHHHHHHHH
Confidence                  11   234655554 679988763 22 4689999876544   689999999986

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=95.66  E-value=0.18  Score=48.77  Aligned_cols=160  Identities=15%  Similarity=0.059  Sum_probs=84.2

Q ss_pred             cceEEehhHhhchhccchhh-hhcccC--Ccch-HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhccH
Q psy7882           8 DCGVVVSAVDFGSGDNGTYL-GFQCLQ--ICRF-VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTV   83 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~f-A~e~~G--V~PD-i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agnl   83 (329)
                      ++++|.||+...|... .+. ....+.  +.=. ++|-...| +.+|.+++++++.+.+..  ..   .....++++. .
T Consensus       183 ~~~ii~De~y~~~~~~-~~~~~~~~~~~vi~~~S~SK~~~~G-lRiG~~i~~~~~i~~~~~--~~---~~~~~~~~~q-~  254 (356)
T PRK04870        183 PGLVVVDEAYQPFAGD-SWLPRLARFPNLLVMRTVSKLGLAG-LRLGYLAGHPAWIAELDK--VR---PPYNVNVLTQ-A  254 (356)
T ss_pred             CCEEEEECCchhhcCc-chHHHHhhCCCEEEEecchhhhhHH-HhhhhhhCCHHHHHHHHH--cc---CCCcCCHHHH-H
Confidence            6789999999877422 111 111110  0000 57943345 479999999998887753  11   0111111111 1


Q ss_pred             HHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCC
Q psy7882          84 RPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG  161 (329)
Q Consensus        84 A~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~G  161 (329)
                      ++..+++. +.+++ .+++++.-+.+.+.|++    .+.+.-...-|.++.+.+. +           ...+...|.++|
T Consensus       255 ~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~l~~~g  318 (356)
T PRK04870        255 TALFALEHVDVLDAQAAQLRAERTRLAAALAA----LPGVTVFPSAANFILVRVP-D-----------AAAVFDGLKTRG  318 (356)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEECCCCCeEEEEECC-C-----------HHHHHHHHHHCC
Confidence            22233333 33433 44455555555555543    3322212234555555542 1           235778889999


Q ss_pred             ceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         162 LLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       162 VLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.+.++..    ..+.+|+.-.      +.++.+.+++++
T Consensus       319 I~v~~~~~f~~~~~~~iRis~~------~~~~~~~l~~al  352 (356)
T PRK04870        319 VLVKNLSGMHPLLANCLRVTVG------TPEENAQFLAAL  352 (356)
T ss_pred             EEEEECCCCCCCCCCeEEEeCC------CHHHHHHHHHHH
Confidence            99987532    2456776532      578899988875

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=95.66  E-value=0.3  Score=48.33  Aligned_cols=155  Identities=12%  Similarity=0.003  Sum_probs=92.7

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ++++|+||-..-|..   --+..... .|+       ++|+.|=..+=+|-+++++++.+.+..        ..  ..|+
T Consensus       177 ~~~vVvDEAY~eF~~---~~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~--------vr--~p~~  242 (356)
T COG0079         177 GGLVVIDEAYIEFSP---ESSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNK--------VR--PPFN  242 (356)
T ss_pred             CcEEEEeCchhhcCC---chhhhhcc-CCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHH--------hc--CCCC
Confidence            789999999998865   11222222 344       679764222468889999999998874        11  1233


Q ss_pred             cc-HHHHHHH---Hh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          81 DT-VRPHVQI---KK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        81 gn-lA~aaal---a~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      -+ .+.+++.   +. +.+++ .+++..--++|.+.|+.+    + +..| -..+-++-+++..         .. ...+
T Consensus       243 v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~----~-~~~v~pS~aNFvlv~~~~---------~~-~~~l  307 (356)
T COG0079         243 VSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL----G-LFGVFPSQANFVLVRVPD---------AE-AAAL  307 (356)
T ss_pred             CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC----C-CCeecCCCCcEEEEECCC---------cc-HHHH
Confidence            33 3333333   33 44444 555555555565555543    3 2211 2225556555532         13 4568


Q ss_pred             HHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.++||+++.+..   ..+.+|+.    +  .|++|-+.+++++
T Consensus       308 ~~~L~~~giivR~~~~~~~~~~~lRit----v--gt~een~~ll~AL  348 (356)
T COG0079         308 AEALLKKGILVRDCSSVGLLPGYLRIT----V--GTPEENDRLLAAL  348 (356)
T ss_pred             HHHHHHCCEEEEeCCCCCCCCCeEEEE----e--CCHHHHHHHHHHH
Confidence            8999999999998742   23467763    3  2688889999875

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=95.66  E-value=0.2  Score=48.71  Aligned_cols=148  Identities=8%  Similarity=0.043  Sum_probs=73.6

Q ss_pred             ccceEEehhHhhchhccchhhh-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      +++ +|+||+...|...+..-. .....-.+.      ++|.++ .|+ -+|.+++.+++++.+..  ..   ...+.++
T Consensus       177 ~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~~v~~~~~~~~~~~--~~---~~~~~s~  249 (360)
T PRK07392        177 FAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGL-RLGYAIAHPDRLQRWQQ--WR---DPWPVNG  249 (360)
T ss_pred             CCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCch-heeeeeCCHHHHHHHHh--hC---CCCCCCH
Confidence            454 666999998854442111 111111122      679998 885 99999999998887653  11   0111122


Q ss_pred             hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      ++. .++.++++. +..+. .+.+++.-+++.+.|    ++++.+.-..+-|.++-+++..           -...+...
T Consensus       250 ~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L----~~~~~~~~~~~~~~fl~~~~~~-----------~~~~l~~~  313 (360)
T PRK07392        250 LAA-AAAIAALADRDFQQQTWAWLPPAREALFQGL----ASLPGLTPLPSAANFLLVQSQG-----------SALQLQEK  313 (360)
T ss_pred             HHH-HHHHHHhccHHHHHHHHHHHHHHHHHHHHHH----HhCCCcEECCCCCCEEEEEcCC-----------CHHHHHHH
Confidence            211 222333433 33222 122223333333333    3343322222446666555531           02346666


Q ss_pred             H-HHCCceeeccCC----CCCEEEEe
Q psy7882         157 C-KEHGLLLGRGGL----SGNTLTAL  177 (329)
Q Consensus       157 l-~e~GVLl~~~G~----~~nvIrl~  177 (329)
                      + .++||++.++..    ..+.+|+.
T Consensus       314 ll~~~gv~v~pg~~f~~~~~~~iRi~  339 (360)
T PRK07392        314 LLQQHRILIRDCLSFPELGDRYFRVA  339 (360)
T ss_pred             HHhhCCEEEEeCCCCCCCCCCEEEEE
Confidence            5 468999988532    23577774

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=95.64  E-value=0.28  Score=47.97  Aligned_cols=168  Identities=10%  Similarity=0.013  Sum_probs=84.9

Q ss_pred             ccccceEEehhHhhchhccch----hhhhcc-cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQC-LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~-~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..|++++|.||+...|-..|.    +..... .+..=.   ++|.++ .| +=+|.+++++++.+.+..  ...   ...
T Consensus       196 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~--~~~---~~~  269 (385)
T PRK09276        196 KKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGK--VKS---NVD  269 (385)
T ss_pred             HHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHH--HHh---hcc
Confidence            357899999999987632221    111110 111001   679985 55 368889999999887763  110   011


Q ss_pred             chhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHH
Q psy7882          76 KLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        76 g~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .+..... .+++.++..  ..+++ .+..++.-+++.+.|++    ++. .-... -|+++-+.+...      .+   .
T Consensus       270 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~~~~~~~~~v~~~~~------~~---~  335 (385)
T PRK09276        270 SGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK----LGL-EVEPPKATFYVWAPVPKG------YT---S  335 (385)
T ss_pred             CCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----CCC-cccCCCcceEEEEECCCC------CC---H
Confidence            1111111 333344432  22222 22334444444444443    332 11122 255566666321      11   3


Q ss_pred             HHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...++ ++||++.++.    ...+.+|+.-  ..   +++++.+.++..
T Consensus       336 ~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~---~~~~l~~~l~~l  382 (385)
T PRK09276        336 AEFATLLLDKAGVVVTPGNGFGEYGEGYFRIAL--TV---PDERIEEAVERI  382 (385)
T ss_pred             HHHHHHHHHhCCEEECCchhhCCCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence            45777776 5899998842    1235788853  22   467887777653

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=95.58  E-value=0.28  Score=50.57  Aligned_cols=174  Identities=11%  Similarity=0.035  Sum_probs=87.8

Q ss_pred             cccceEEehhHhhchhccchhh-h---h-ccc---CCcch-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL-G---F-QCL---QICRF-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQ   68 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f-A---~-e~~---GV~PD-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~   68 (329)
                      .||+++|.||+...+-..|.-+ +   . +.+   ++.||       ++|.++ .|+ -+|.+++. +.+.+.+..  ..
T Consensus       230 ~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGl-RvG~li~~~~~l~~~~~~--~~  306 (496)
T PLN02376        230 RKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF-RVGIVYSFNDSVVSCARK--MS  306 (496)
T ss_pred             HcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcc-eEEEEEECCHHHHHHHHH--Hh
Confidence            5799999999999864344211 1   1 111   12345       579996 775 89998884 555444322  11


Q ss_pred             cCCCCccchhhhccHHHHHHHHh-hHHhH-HH----HHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCC
Q psy7882          69 ILKTPAHKLKISDTVRPHVQIKK-SVLER-FV----HTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKET  141 (329)
Q Consensus        69 ~~~~~~hg~T~agnlA~aaala~-~ile~-le----~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~  141 (329)
                         .+.+.++.+. .+.++.+.. +.+++ +.    +.++.-+.+.+.|++    +++ ..+. .-|+++-+++......
T Consensus       307 ---~~~~vs~~~Q-~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~----~gi-~~~~~~aG~flwi~l~~~~~~  377 (496)
T PLN02376        307 ---SFGLVSSQTQ-LMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKK----ADI-ACLTSNAGLFAWMDLRHLLRD  377 (496)
T ss_pred             ---hcCCCCHHHH-HHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCCceEEEEEEchhhhcc
Confidence               1222222222 233344444 43333 22    222223333333332    332 2222 3468888888431100


Q ss_pred             CCCCChHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+  +....+++.+.+ .||.+.|...    .++.+|+.=    ...+++++++.++..
T Consensus       378 ~~~~--~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~f----a~~~~~~l~~al~rl  432 (496)
T PLN02376        378 RNSF--ESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICF----ANMDDDTLHVALGRI  432 (496)
T ss_pred             CCch--hHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEe----eCCCHHHHHHHHHHH
Confidence            0001  122457777776 5999988432    245677642    212467888888764

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=95.57  E-value=0.31  Score=47.15  Aligned_cols=87  Identities=13%  Similarity=0.084  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC-----
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG-----  168 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G-----  168 (329)
                      .++..++.+++.++|+++.. ......  -...+.++.+.+.. .      +   ...+.+.|.++ ||.+....     
T Consensus       272 ~~~~~~l~~~~~~~l~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~------~---~~~~~~~L~~~~gi~v~~g~~~~~~  340 (376)
T TIGR01977       272 AKKECMLTEKLLNGLREINK-VKIYGPADPANRVGVVSFTVEG-I------D---SEEVADILDEKFDIATRTGLHCAPL  340 (376)
T ss_pred             HHHHHHHHHHHHHHHhcCCC-eEEeCCCCccccCCeEEEEECC-C------C---HHHHHHHHhccCCEEEEcccccchH
Confidence            44566666666666654310 011110  11134566666521 1      1   34577888887 88886521     


Q ss_pred             -------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         169 -------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       169 -------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                             .....+|+.+..-.   |++||+.+++++
T Consensus       341 ~~~~~g~~~~~~iRis~~~~~---t~~dv~~~~~~l  373 (376)
T TIGR01977       341 AHKTIGTFATGTIRLSLGYFN---TEEEIEKLLEAL  373 (376)
T ss_pred             HHHHhCCCCCCeEEEecCCCC---CHHHHHHHHHHH
Confidence                   12468999987655   689999999985

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK08175 aminotransferase; Validated

Probab=95.53  E-value=0.28  Score=48.29  Aligned_cols=171  Identities=7%  Similarity=-0.022  Sum_probs=86.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC--cch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|.||+...+--.|... .....+  .+|       ++|.++ .| +=+|.+++++++.+.+..  ...  ...
T Consensus       194 ~~~~i~ii~De~y~~l~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~--~~~--~~~  267 (395)
T PRK08175        194 KRYDVLVVHDLAYADIVYDGWKA-PSIMQVPGAKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR--IKS--YHD  267 (395)
T ss_pred             HHcCcEEEEecchHhhccCCCCC-cchhcCCCcccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHH--HHh--hcc
Confidence            35799999999997663222111 011111  134       579985 55 367888899999887653  110  001


Q ss_pred             c-chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          75 H-KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        75 h-g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      + .++.+. .++++++..  +.+++ .+..++.-+++.+.|+.    ++.....-.-|+++-+++..+..      ..-.
T Consensus       268 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~~g~~i~i~l~~~~~------~~~~  336 (395)
T PRK08175        268 YGTFTPLQ-VAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMVEMPKASMYVWAKIPEPYA------AMGS  336 (395)
T ss_pred             cCCCcHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCEEEEEEEECCcccC------CCCH
Confidence            1 111111 223333332  22222 22233333344444443    33211112247788888753210      0013


Q ss_pred             HHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.++ ++||++.+..    ...+.+||.  +.   .+++.+.+.++..
T Consensus       337 ~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis--~~---~~~~~~~~al~~l  383 (395)
T PRK08175        337 LEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA--LI---ENRDRIRQAIRGI  383 (395)
T ss_pred             HHHHHHHHHhCCEEEeCchhhCcCCCCeEEEE--eC---CCHHHHHHHHHHH
Confidence            45777665 6899998852    123578874  22   2567887777753

>PRK08068 transaminase; Reviewed

Probab=95.51  E-value=0.21  Score=49.00  Aligned_cols=168  Identities=10%  Similarity=-0.019  Sum_probs=89.8

Q ss_pred             ccccceEEehhHhhchhccch-h-hhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-Y-LGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~-fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .++|+++|.||+...+...+. . ......+..+-      ++|.++ .|+ =+|.+++.+++.+.+..  ..   ....
T Consensus       197 ~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~l~~~l~~--~~---~~~~  270 (389)
T PRK08068        197 KKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW-RVAFAVGNESVIEAINL--LQ---DHLF  270 (389)
T ss_pred             HHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc-eeEeEecCHHHHHHHHH--HH---hhcc
Confidence            357999999999876644431 1 11122222111      679995 674 78999999999887763  11   0111


Q ss_pred             chhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHH
Q psy7882          76 KLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        76 g~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .++.... .++++++..  +.+++ .+..++.-+.+.+.|++    ++. .-....| +++-+.+....         -.
T Consensus       271 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~-~~~~~~g~~~~~v~~~~~~---------~~  336 (389)
T PRK08068        271 VSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGW-EVDAPKGSFFAWMPVPKGY---------TS  336 (389)
T ss_pred             CCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cccCCCeeEEEEEECCCCC---------CH
Confidence            1222222 333444433  33333 34445555555555544    332 1123334 45566664211         13


Q ss_pred             HHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|.+ +||++.++.    ...+.+||.=.  .   +++.+.+.++..
T Consensus       337 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~---~~~~l~~al~~l  383 (389)
T PRK08068        337 EQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--T---DEERLREAVERI  383 (389)
T ss_pred             HHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--C---CHHHHHHHHHHH
Confidence            457888875 699998742    12457777531  1   356677766653

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=95.42  E-value=0.29  Score=46.71  Aligned_cols=90  Identities=11%  Similarity=-0.040  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCE
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNT  173 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nv  173 (329)
                      .++..++.+++.+.|+++    +.+.-+ ...+.++.+.+..+...     ......+.+.|.++|+++.+..  .....
T Consensus       250 ~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~~~-----~~~~~~i~~~L~~~g~~~~~~~~~~~~~~  320 (345)
T cd06450         250 IDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSVKL-----DELNYDLSDRLNERGGWHVPATTLGGPNV  320 (345)
T ss_pred             HHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcchh-----hHHHHHHHHHHHhcCCEEEEeeEECCeEE
Confidence            566777777777777654    221111 01234566665421000     0124568888889865543321  12467


Q ss_pred             EEEeCccccCcCCHHHHHHHHhcc
Q psy7882         174 LTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       174 Irl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +|+.+-...+  |++|+|++++++
T Consensus       321 lRis~~~~~~--t~~di~~l~~~l  342 (345)
T cd06450         321 LRFVVTNPLT--TRDDADALLEDI  342 (345)
T ss_pred             EEEEecCCCC--CHHHHHHHHHHH
Confidence            8887754332  689999999975

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK08361 aspartate aminotransferase; Provisional

Probab=95.39  E-value=0.23  Score=48.81  Aligned_cols=168  Identities=8%  Similarity=0.028  Sum_probs=83.2

Q ss_pred             cccceEEehhHhhchhccch-hhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+++++|.||+...|--.+. ..+.  ....+|       ++|.++ .| +-+|.+++++++.+.+..  .... ...+.
T Consensus       197 ~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~--~~~~-~~~~~  270 (391)
T PRK08361        197 DYNIYILSDEPYEHFLYEGAKHYPM--IKYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIK--LHAY-IIGNV  270 (391)
T ss_pred             HcCeEEEEEcccccceeCCCCCCCH--hhcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHH--HHhh-hccCC
Confidence            56899999999876632221 1111  112233       579997 66 378889999888876543  1000 01111


Q ss_pred             hhhhccHHHHHHHHh-h---HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882          77 LKISDTVRPHVQIKK-S---VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        77 ~T~agnlA~aaala~-~---ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +++.. .+.+.++.. +   .+++ .+..++.-+.+.+.|+    .++.+.-.... |+++.+.+....     ++   .
T Consensus       271 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~~~~~~p~g~~~~~~~l~~~~-----~~---~  337 (391)
T PRK08361        271 ASFVQ-IAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLK----EMPHIKVFEPKGAFYVFANIDETG-----MS---S  337 (391)
T ss_pred             ChHHH-HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCEEEEEEEECCCCC-----CC---H
Confidence            21111 222333433 2   1222 2222333333333333    33333222223 555666664211     11   2


Q ss_pred             HHHHHHHH-HCCceeeccC---C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCK-EHGLLLGRGG---L-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~-e~GVLl~~~G---~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...+. ++||++.++.   . ..+.+|+.  +..   +++++++.++..
T Consensus       338 ~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~---~~~~l~~al~~l  384 (391)
T PRK08361        338 EDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS--YAT---SKEKLIEAMERM  384 (391)
T ss_pred             HHHHHHHHHhCCEEEcCchhhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence            34666666 5899998742   1 23678875  332   466788777764

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=95.39  E-value=0.25  Score=48.22  Aligned_cols=162  Identities=7%  Similarity=-0.006  Sum_probs=82.1

Q ss_pred             ccceEEehhHhhchhccchh-hhhccc-CCcch------HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCCccc
Q psy7882           7 RDCGVVVSAVDFGSGDNGTY-LGFQCL-QICRF------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~-fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      +++++|.||+..-|--.+.. ...... ...+.      ++|.++ .|+ .+|.+++ .+++.+.+..  ..   ...+.
T Consensus       190 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~Gl-RiG~~i~~~~~l~~~~~~--~~---~~~~~  263 (371)
T PRK05166        190 PETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGL-RVGYGLVSDPELVGLLDR--VR---TPFNV  263 (371)
T ss_pred             CCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchh-heeeeecCCHHHHHHHHH--hc---cCCCC
Confidence            47899999998766421111 011111 11112      689998 884 9998664 6778777653  11   11122


Q ss_pred             hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++++. .++.+++.. +.+++ .+...+.-+++.+.|++    ++. .-....|.++-+.+..        +   ...+.
T Consensus       264 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~p~~g~fl~~~~~~--------~---~~~l~  326 (371)
T PRK05166        264 NGAAQ-AAALAALDDEEHLAKGVALALAERERLKKELAE----MGY-RIAPSRANFLFFDARR--------P---ASAVA  326 (371)
T ss_pred             CHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CcC-eeCCCcCCEEEEeCCC--------C---HHHHH
Confidence            22221 122333333 34433 22333333444444443    332 1123346665554321        1   24578


Q ss_pred             HHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.+...  ..+.+|+.-.      +.++.+.+++++
T Consensus       327 ~~l~~~gi~v~p~~~~~~~~~iRi~~~------~~~~~~~l~~~l  365 (371)
T PRK05166        327 EALLRQGVIVKPWKQPGFETFIRVSIG------SPEENDHFVAAL  365 (371)
T ss_pred             HHHHHCCeEEecCCCCCCCCeEEEEcC------CHHHHHHHHHHH
Confidence            888899999987521  2456776532      355667766654

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=95.37  E-value=0.16  Score=49.80  Aligned_cols=153  Identities=12%  Similarity=0.089  Sum_probs=84.2

Q ss_pred             ceEEehhHhhchhccchhh-hhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           9 CGVVVSAVDFGSGDNGTYL-GFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         9 iLLI~DEVqTGfGRTG~~f-A~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .++|+||+...|-.-+..- ......-.+.      ++|.++ .|+ =+|.+++.+++.+.+..  ..        .+++
T Consensus       184 ~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~i~~~~~~~~l~~--~~--------~~~~  252 (366)
T PRK01533        184 TLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF-RVGYAVGHEELIEKLNV--VR--------LPFN  252 (366)
T ss_pred             CEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHH-HHhHHhCCHHHHHHHHH--hc--------CCCC
Confidence            4677899998774222100 0011111111      679998 774 78988899988887763  11        1123


Q ss_pred             cc-H---HHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-V---RPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-l---A~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      .+ +   +..++++. +.++   ++.+.-..-++.+.++.+.++. .-....|.++-+.+. +           ...+..
T Consensus       253 ~~~~~q~aa~~~l~~~~~~~---~~~~~~~~~r~~~~~~l~~~g~-~~~~~~~nf~~~~~~-~-----------~~~~~~  316 (366)
T PRK01533        253 VSSLAQKAATIAFGDDEFIE---EIVRVNTEGLRQYESFCKENEI-PFYQSQTNFIFLPVE-N-----------GGEIYE  316 (366)
T ss_pred             cCHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHHHHHHHHhCCC-ccCCCcCcEEEEeCC-C-----------HHHHHH
Confidence            33 2   23333433 3332   2333323333344444443332 112344666666552 1           235788


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++++.   ++.+|+.    +  .+.+|.+.+++++
T Consensus       317 ~l~~~GI~Vr~~---~~~iRis----~--~~~~~~~~l~~al  349 (366)
T PRK01533        317 ACAHAGFIIRPF---PNGVRIT----V--GTREQNEGVISVL  349 (366)
T ss_pred             HHHHCCcEEccC---CCceEEe----C--CCHHHHHHHHHHH
Confidence            899999999974   4567764    2  2689999999986

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=95.36  E-value=0.23  Score=48.65  Aligned_cols=171  Identities=7%  Similarity=-0.022  Sum_probs=88.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcc--h-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR--F-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P--D-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|.||+..-|-..+...........+  +       ++|.++ .|+ =+|.+++.+++.+.+..  ...   ..
T Consensus       195 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~~~~li~~l~~--~~~---~~  268 (388)
T PRK07366        195 QQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGF-RIGFAIGNAQLIQALRQ--VKA---VV  268 (388)
T ss_pred             HHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcch-hheehcCCHHHHHHHHH--HHh---hc
Confidence            35789999999988774333210000111112  2       679995 774 78999999999887753  110   11


Q ss_pred             cchhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          75 HKLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        75 hg~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +.++++.. .++.+++..  +.+++ .+..++.-+++.+.|++    ++.....-.-|+++-+.+...      ++. -.
T Consensus       269 ~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~f~~~~~~~~------~~~-~~  337 (388)
T PRK07366        269 DFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ----IGWPVPLPEATMYVWAKLPEP------WQG-NS  337 (388)
T ss_pred             ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeEEEEEECCcc------cCC-CH
Confidence            11222211 222333332  33333 33344444444444443    332111223467777776421      000 02


Q ss_pred             HHHHHHH-HHCCceeeccC---C-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSC-KEHGLLLGRGG---L-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l-~e~GVLl~~~G---~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...+ .++||++.++.   . ..+.+||.  +..   +++++++.++..
T Consensus       338 ~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~---~~~~l~~~l~rl  384 (388)
T PRK07366        338 VEFCTQLVAQTGVAASPGSGFGKSGEGYVRFA--LVH---DPDILEEAVERI  384 (388)
T ss_pred             HHHHHHHHHhCCEEEeCchHhCcCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            3466666 46799998852   1 13567874  222   478888888764

>PRK07582 cystathionine gamma-lyase; Validated

Probab=95.23  E-value=0.24  Score=48.82  Aligned_cols=114  Identities=15%  Similarity=0.075  Sum_probs=58.2

Q ss_pred             cccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCC-ccccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882           6 YRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGS-FWDKLIVHTS-TCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         6 ~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG-~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+|+++|+||++. +.|.       ....+..|     +.|.++|. -+.+|.++++ +++.+.+..  ... ..+...+
T Consensus       160 ~~g~~lvVD~t~~~~~~~-------~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~--~~~-~~g~~~~  229 (366)
T PRK07582        160 AAGALLVVDNTTATPLGQ-------RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER--WRL-LAGAIPG  229 (366)
T ss_pred             HcCCEEEEECCCCCcccc-------CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH--HHH-HhCCCCC
Confidence            4699999999973 3321       11123357     35999762 1245766664 666665542  100 0011112


Q ss_pred             hhhccHHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE------------------eeceeeEEEee
Q psy7882          78 KISDTVRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR------------------GKGLMIGVDLV  136 (329)
Q Consensus        78 T~agnlA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------------G~GLm~gIef~  136 (329)
                      .+.+.+ ++.++++  ++- +++..+.+..+.+.|+    +||.|..|.                  |.|.|+.|++.
T Consensus       230 ~~~a~l-~~r~l~t--l~~R~~~~~~na~~la~~L~----~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~  300 (366)
T PRK07582        230 PFEAWL-AHRSLGT--LGLRFARQCANALAVAELLA----GHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA  300 (366)
T ss_pred             HHHHHH-HHhcccc--HHHHHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence            222111 1122333  211 4555566666655555    355554444                  68899999994

>PRK05942 aspartate aminotransferase; Provisional

Probab=95.10  E-value=0.59  Score=46.04  Aligned_cols=167  Identities=11%  Similarity=0.025  Sum_probs=82.8

Q ss_pred             ccccceEEehhHhhchhccch----hhhhcc-cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQC-LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~-~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..|++++|.||+...|-..|.    ...... .+..=.   ++|.++ .| +=+|.+++++++.+.+..  ...   ...
T Consensus       200 ~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~--~~~---~~~  273 (394)
T PRK05942        200 RKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRT--LKT---NLD  273 (394)
T ss_pred             HHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChh-hheeeeecCHHHHHHHHH--HHh---hcc
Confidence            357999999999775532221    111110 011111   579985 66 378989999999887763  110   001


Q ss_pred             chhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHH
Q psy7882          76 KLKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        76 g~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .++.+.. .++.+++..  +.+++ .++.++.-+++.+.|++    ++. .-+.. -|+++-+.+...      .+   .
T Consensus       274 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~-~~~~~~~~~f~~~~~~~~------~~---~  339 (394)
T PRK05942        274 YGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGW-NIPPTKATMYLWVPCPVG------MG---S  339 (394)
T ss_pred             cCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eecCCCeeeEEEEECCCC------CC---H
Confidence            1111122 333444432  22222 33344444445444443    332 11222 344565666321      11   1


Q ss_pred             HHHHH-HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhc
Q psy7882         151 THILD-SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       151 ~~~~~-~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~  196 (329)
                      ..+.. .+.++||++.++..    ..+.+|+.-.   .  +.+.+.+.++.
T Consensus       340 ~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~--~~~~l~~~l~~  385 (394)
T PRK05942        340 TDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---A--DCDRLGEALDR  385 (394)
T ss_pred             HHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---C--CHHHHHHHHHH
Confidence            23444 44578999977421    2468888753   1  35566666654

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=95.04  E-value=0.57  Score=45.77  Aligned_cols=166  Identities=11%  Similarity=-0.092  Sum_probs=82.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---H--HHhhcCCccccceeeechhHHHhhhhhhhccC-CCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---V--QKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-KTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i--~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~~~~hg~T   78 (329)
                      ..+|+++|+|++|. +|..    ........+|   +  -|. . |-.-+|++..+++..  +.+...+.. ......+|
T Consensus       167 ~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~~~~s~~K~-~-gp~G~g~l~vr~~~~--~~p~~~g~~~~~~~~~gt  237 (382)
T TIGR03403       167 KERGVLFHTDAVQA-IGKI----PVDVQKAGVDFLSFSAHKF-H-GPKGVGGLYIRKGVE--LTPLFHGGEHMGGRRSGT  237 (382)
T ss_pred             HHcCCEEEEechhh-cCCC----ccCccccCCCEEEEcchhh-C-CCCceEEEEECCCCC--CCCcccCCCCCCCcccCC
Confidence            45799999999987 3211    1111122357   2  294 3 321267777776531  111000000 00011222


Q ss_pred             hhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-----eceeeEEEeecCCCCCCCCChH
Q psy7882          79 ISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-----KGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        79 ~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-----~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+..  +++++++..  +.++. .++.+.+.++|.++|.++    +.+ .+-+     .+-+..+.+.. .         
T Consensus       238 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~~~-~~~~~~~~~~~~~~~~~~~~-~---------  302 (382)
T TIGR03403       238 LNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----PDV-FVVGDREHRVPNTILISIKG-V---------  302 (382)
T ss_pred             cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CCE-EEECCCCCCcCCEEEEEeCC-C---------
Confidence            2222  344444432  22332 455666666666666543    322 1211     12233444421 0         


Q ss_pred             HHHHHHHHHHHCCceeec---cC--------------C----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGR---GG--------------L----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~---~G--------------~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+...|.++||.++.   |.              .    ...+||+.+....   |++|||.+++++
T Consensus       303 ~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~---t~~did~~~~~l  369 (382)
T TIGR03403       303 EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFT---TEEEIDYTIEVF  369 (382)
T ss_pred             CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCC---CHHHHHHHHHHH
Confidence            123466667889999984   21              0    1257999998876   589999999986

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK09148 aminotransferase; Validated

Probab=94.93  E-value=0.43  Score=47.35  Aligned_cols=171  Identities=4%  Similarity=-0.104  Sum_probs=88.3

Q ss_pred             cccceEEehhHhhchhccchhhh-hcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLG-FQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      +||+++|.||+...|...+..+. ...+.-.+|       ++|.++ -|+ =+|.+++++++.+.+..  .... .....
T Consensus       196 ~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl-R~G~~v~~~~~i~~l~~--~~~~-~~~~~  271 (405)
T PRK09148        196 KHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW-RMGFAVGNERLIAALTR--VKSY-LDYGA  271 (405)
T ss_pred             HcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch-heeeeeCCHHHHHHHHH--HHHH-hccCC
Confidence            57999999999987632221111 111110123       579997 774 78999999999887753  1100 00111


Q ss_pred             hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++.+. .++++++..  +.+++ .+..++.-+.+.+.|++    ++. .-+. .-|+++-+.+....      +......
T Consensus       272 ~~~~q-~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~-~~~~p~~g~f~~~~l~~~~------~~~~~~~  339 (405)
T PRK09148        272 FTPIQ-VAATAALNGPQDCIAEMRELYKKRRDVLVESFGR----AGW-DIPPPAASMFAWAPIPEAF------RHLGSLE  339 (405)
T ss_pred             ChHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCC-ccCCCCeeEEEEEECCCcc------CCCCHHH
Confidence            22211 233344432  33332 23344444445444443    332 1122 23666666663211      0001245


Q ss_pred             HHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...++ ++||.+.++..    ..+.+|+.-.  .   +.+++.+.++..
T Consensus       340 ~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~---~~~~l~~al~~l  384 (405)
T PRK09148        340 FSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--E---NEQRIRQAARNI  384 (405)
T ss_pred             HHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence            666665 68999988521    2467888432  2   467888877754

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=94.93  E-value=0.41  Score=47.15  Aligned_cols=169  Identities=7%  Similarity=0.002  Sum_probs=85.5

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .+||+++|.||+...+--.|.. ....  ...+|       ++|.++ .|+ -+|.+++++++++.+..  .... ...+
T Consensus       196 ~~~~~~ii~D~~y~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~g~~Gl-RvG~~v~~~~~~~~~~~--~~~~-~~~~  269 (391)
T PRK07309        196 KKYDIFVISDEVYSELTYTGEPHVSIA--EYLPDQTILINGLSKSHAMTGW-RIGLIFAPAEFTAQLIK--SHQY-LVTA  269 (391)
T ss_pred             HHcCcEEEEEccccceeeCCCCCCCHH--HhccCCEEEEecChhhccCccc-eeEEEEeCHHHHHHHHH--HHhh-cccC
Confidence            3579999999998876432321 1111  11234       579986 674 78999999999887763  1100 0111


Q ss_pred             chhhhccHHHHHHHHh-hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK-SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~-~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .++.+. .+++.++.. .. ... ..+.++.-+++.+.|+    +++. .-... -|+.+.+.+....      . ....
T Consensus       270 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~-~~~~p~gg~~~~~~l~~~~------~-~~~~  336 (391)
T PRK07309        270 ATTMAQ-FAAVEALTNGKDDALPMKKEYIKRRDYIIEKMT----DLGF-KIIKPDGAFYIFAKIPAGY------N-QDSF  336 (391)
T ss_pred             CChHHH-HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH----HCCC-eecCCCeeEEEEEECCCCC------C-CCHH
Confidence            122111 233333433 11 111 2233333344444443    3332 11112 2444445543210      0 0123


Q ss_pred             HHHHH-HHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDS-CKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~-l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+. +.++||++.++..    .++.+|+.-.    . +.+++++.+++.
T Consensus       337 ~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~----~-~~~~l~~~i~~l  382 (391)
T PRK07309        337 KFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA----A-SMETIKEAMKRL  382 (391)
T ss_pred             HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec----C-CHHHHHHHHHHH
Confidence            46654 5578999987531    2467888522    2 467888888874

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=94.92  E-value=0.33  Score=47.75  Aligned_cols=167  Identities=9%  Similarity=-0.031  Sum_probs=82.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ..||+++|.|++|.--     ......+|  .|     ..|.++|.  ..|+++++++..+.......+..... ..+| 
T Consensus       176 ~~~gi~vivD~a~~~~-----~~~~~~~g--~D~~~~S~~K~l~gp--~~G~l~~~~~~i~~~~~~~~~~~~~~-~~~~-  244 (363)
T TIGR01437       176 QEHNLPLIVDAAAEED-----LQKYYRLG--ADLVIYSGAKAIEGP--TSGLVLGKKKYIEWVKLQSKGIGRAM-KVGK-  244 (363)
T ss_pred             HHcCCeEEEECCCCCc-----hHHHHHcC--CCEEEEeCCcccCCC--ceEEEEEcHHHHHHHHhccCCCccee-ccCH-
Confidence            4579999999999611     11111234  36     24998764  37888888777665432001100001 1111 


Q ss_pred             hcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---Eeece---eeEEEeecCCCCCCCCChHH
Q psy7882          80 SDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---RGKGL---MIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        80 agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---RG~GL---m~gIef~~d~~~~~p~~~~~  149 (329)
                       .+ +++.++++.  +.-.+ ++...+.-+++.++|.++    |.+.-.   ...|.   ...|.|......   .   .
T Consensus       245 -~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i----~g~~~~~~~~~~~~~~~~~~v~~~~~~~g---~---~  313 (363)
T TIGR01437       245 -ENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTL----KGVSASIVQDEAGRDIARAEIRFDESELG---M---T  313 (363)
T ss_pred             -HHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcC----CCeEEEEecCCCCCcCceEEEEEeccCCC---C---C
Confidence             12 344444432  11101 222223333455555543    222111   11111   133444321100   1   1


Q ss_pred             HHHHHHHHHHCC--ceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHG--LLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~G--VLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++|  |+.++.......+++.|+. .   +++|+|.+++++
T Consensus       314 ~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~---~~~e~~~~~~~l  359 (363)
T TIGR01437       314 AADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-V---TGGQLDIIVERI  359 (363)
T ss_pred             HHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-C---CHHHHHHHHHHH
Confidence            456888888777  7777533345688888884 3   478999999875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=94.91  E-value=0.27  Score=47.46  Aligned_cols=54  Identities=9%  Similarity=0.062  Sum_probs=36.9

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIK   64 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~   64 (329)
                      +++++|.||+...|.. .....  ...-.|.      ++|.++ .|+ =+|.+++++++.+.+..
T Consensus       168 ~~~~ii~De~y~~~~~-~~~~~--~~~~~~~vi~l~S~SK~~~l~Gl-RiG~iv~~~~~i~~~~~  228 (337)
T PRK03967        168 TGKPVVLDEAYAEFSG-KSLIG--LIDEYPNLILLRTFSKAFGLAGI-RAGYAIANEEIIDALYR  228 (337)
T ss_pred             cCCEEEEECchhhhcc-cchHH--HHhhCCCEEEEecchHhhcchhh-hheeeecCHHHHHHHHh
Confidence            5899999999988742 12111  1111122      679998 884 89999999988887763

>PRK06767 methionine gamma-lyase; Provisional

Probab=94.81  E-value=0.11  Score=51.47  Aligned_cols=138  Identities=11%  Similarity=-0.028  Sum_probs=73.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..+|+++|+||.+. .+-.+.-.   .+|  .|     +.|.++|.-.++ |+++++++..+..... ..    ...|+.
T Consensus       173 ~~~g~~vivD~a~a-~~~~~~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~-~~----~~~g~~  241 (386)
T PRK06767        173 KRNGLLVIVDNTFC-SPYLQRPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRP-MR----KDIGGI  241 (386)
T ss_pred             HHcCCEEEEECCCc-ccccCCch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHH-HH----HHhCCC
Confidence            35799999999974 11111111   123  36     359998743476 7788888766543210 00    011222


Q ss_pred             hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE------------eeceeeEEEeecCCCCCCC
Q psy7882          79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR------------GKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------G~GLm~gIef~~d~~~~~p  144 (329)
                      .+. ..+..++.. +.+.. +++.++...++.+.|+    ++|.+..|.            |.|-|+.+++..+      
T Consensus       242 ~~~-~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~----~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~------  310 (386)
T PRK06767        242 MAP-FDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLK----NHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG------  310 (386)
T ss_pred             CCH-HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH----cCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC------
Confidence            211 222223332 22221 4555666666666554    455554443            7788999998521      


Q ss_pred             CChHHHHHHHHHHHHCCceeec
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~  166 (329)
                        .+...+|++.|...++-+.-
T Consensus       311 --~~~~~~f~~~l~~~~~~~s~  330 (386)
T PRK06767        311 --KEETQAFINDLHFITIAVSL  330 (386)
T ss_pred             --HHHHHHHHHhCCccEEecCC
Confidence              13356688887766655544

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=94.80  E-value=0.11  Score=50.94  Aligned_cols=114  Identities=14%  Similarity=0.009  Sum_probs=62.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTST-CTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~-eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+|+.+...    .+  +......+|     +.|.++|.- ...|++++++ ++++.+..  ..    ...|.
T Consensus       152 ~~~g~~livD~t~~~~----~~--~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~--~~----~~~g~  219 (369)
T cd00614         152 HEHGALLVVDNTFATP----YL--QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRF--LR----LALGT  219 (369)
T ss_pred             HHcCCEEEEECCCcch----hc--CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHH--HH----HhhCC
Confidence            4579999999986422    11  122233457     459998742 3568888877 77776553  10    01122


Q ss_pred             hhhcc-HHHHHHHHh-hHHh-HHHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEee
Q psy7882          78 KISDT-VRPHVQIKK-SVLE-RFVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLV  136 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile-~le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~  136 (329)
                        ..+ ..+..++.. +.+. ++++..+...++.+.|++    +|.+..                  ..|.|.|+.|++.
T Consensus       220 --~~~p~~a~~~l~~l~tl~~r~~~~~~na~~la~~L~~----~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~  293 (369)
T cd00614         220 --ILSPFDAWLLLRGLKTLPLRMERHSENALKVAEFLEK----HPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK  293 (369)
T ss_pred             --CCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc----CCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence              222 344343333 2222 245555555566555543    332222                  2477999999985

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK12414 putative aminotransferase; Provisional

Probab=94.77  E-value=0.56  Score=46.09  Aligned_cols=170  Identities=5%  Similarity=-0.103  Sum_probs=84.1

Q ss_pred             cccceEEehhHhhchhccchhh-hhc-ccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL-GFQ-CLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f-A~e-~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      +|++++|.||+..-+.-.|... ... +.+....      ++|.++ .|+ =+|.+++++++.+.+..  .... ...+.
T Consensus       193 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RiG~~v~~~~l~~~l~~--~~~~-~~~~~  268 (384)
T PRK12414        193 NTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RVGYCLAPAELMDEIRK--VHQF-MVFSA  268 (384)
T ss_pred             HCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eEEEEecCHHHHHHHHH--HHhh-eecCC
Confidence            5799999999987653223211 111 1111111      679996 774 78999999998877653  1100 01112


Q ss_pred             hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      ++++. .++..++.. ..+.+ .+..++.-+.+.+.|++    ++. .-.... |+++.+.+..-..       .....+
T Consensus       269 s~~~q-~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~gg~~~~~~~~~~~~-------~~~~~~  335 (384)
T PRK12414        269 DTPMQ-HAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SRF-ELLPSEGSFFMLARFRHFSD-------ESDSDF  335 (384)
T ss_pred             CcHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CCC-eecCCCcceEEEEcccccCC-------CCHHHH
Confidence            22211 223333433 22211 22334444444444443    332 112233 4555556632100       011234


Q ss_pred             H-HHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 L-DSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~-~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . ..+.++||.+.++..      ..+.+|+.=  ..   +++++++.++.+
T Consensus       336 ~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~--~~---~~~~~~~~~~rl  381 (384)
T PRK12414        336 VLRLIRDARVATIPLSAFYTDGTDTGLIRLSF--SK---DDATLVEGARRL  381 (384)
T ss_pred             HHHHHHhCCEEEecchhhcCCCCCCCEEEEEe--cC---CHHHHHHHHHHH
Confidence            4 556789999988531      135677742  22   478888888753

>PRK05957 aspartate aminotransferase; Provisional

Probab=94.76  E-value=0.63  Score=45.81  Aligned_cols=171  Identities=11%  Similarity=-0.025  Sum_probs=87.5

Q ss_pred             ccccceEEehhHhhchhccch-hhhh-cccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGF-QCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~-e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|.||+...|-..+. .... ...+..+-      ++|.++ .|+ -+|.+++.+++++.+..  ... .....
T Consensus       190 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~--~~~-~~~~~  265 (389)
T PRK05957        190 AEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW-RIGYMVIPIHLLEAIKK--IQD-TILIC  265 (389)
T ss_pred             HHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc-eeEEEecCHHHHHHHHH--HHh-hcccC
Confidence            357999999999876643221 1111 11111111      679996 664 78999999999888764  110 00011


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-Eee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGK-GLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~-GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .++++. .+...+++.  +.+++ .+++++.-+.+.+.|++    .+.+..+ ... |+++-+++..+.      +   .
T Consensus       266 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~gg~~~~~~~~~~~------~---~  331 (389)
T PRK05957        266 PPVVSQ-YAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ----LQDRCTLHPANGAFYCFLKVNTDL------N---D  331 (389)
T ss_pred             CCcHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----cCCCccccCCCeeEEEEEeCCCCC------C---h
Confidence            111111 222334443  34444 33344443444444443    3322112 122 555666663211      1   3


Q ss_pred             HHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++.+.|. ++||++.+...    .++.+|+.=.    ..+++++.+.++..
T Consensus       332 ~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~----~~~~~~l~~~~~~l  379 (389)
T PRK05957        332 FELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG----ALQKATAKEGIERL  379 (389)
T ss_pred             HHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe----cCCHHHHHHHHHHH
Confidence            45777776 58999988421    1346777521    12467788877764

>KOG1357|consensus

Probab=94.70  E-value=0.15  Score=51.86  Aligned_cols=56  Identities=9%  Similarity=-0.054  Sum_probs=39.6

Q ss_pred             cccccceEEehhHhhc--hhccchhhhhcccCCcch-----HH---HhhcCCccccceeeechhHHHhhh
Q psy7882           4 TYYRDCGVVVSAVDFG--SGDNGTYLGFQCLQICRF-----VQ---KDFKGSFWDKLIVHTSTCTFENFI   63 (329)
Q Consensus         4 ~~~~giLLI~DEVqTG--fGRTG~~fA~e~~GV~PD-----i~---KaLgGG~~PigAv~~~~eI~d~~~   63 (329)
                      -.|+.+.|++||-.++  .|+||. +.++++|+.|.     ++   |..+++.   |-+.+++++-+.+.
T Consensus       302 kkkykayl~lDEAHSiGA~g~tGr-gvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lr  367 (519)
T KOG1357|consen  302 KKKYKAYLYLDEAHSIGAMGATGR-GVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLR  367 (519)
T ss_pred             hccccEEEEeeccccccccCCCCc-ceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhc
Confidence            4577899999998873  456774 68999999984     22   6655432   33678888887654

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=94.64  E-value=0.33  Score=49.85  Aligned_cols=90  Identities=10%  Similarity=-0.036  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-------C
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-------L  169 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-------~  169 (329)
                      .+++.++.++|+++|++.  .+..+..-. .--+..|+|....     .   ....+.+.|.+.||++....       .
T Consensus       316 ~~~~~~na~~L~~~L~~~--G~~l~~~~t-~~hi~lv~~~~~g-----i---~~~~~~~~L~~~~I~~nk~~~p~~~~~~  384 (475)
T PLN03226        316 QKQVKANAAALANRLMSK--GYKLVTGGT-DNHLVLWDLRPLG-----L---TGSRVEKVLDLAHITLNKNAVPGDSSAL  384 (475)
T ss_pred             HHHHHHHHHHHHHHHHhC--CCEEEcCCC-CCCEEEEEccCCC-----C---CHHHHHHHHHHCCCEECCCCCCCCcccC
Confidence            567888888888887763  232222100 1234555653211     0   12346677778999886521       1


Q ss_pred             CCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882         170 SGNTLTALQP-KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       170 ~~nvIrl~PP-L~It~~t~eeId~~l~~~  197 (329)
                      .+..||+..| ++.--++++|++++.+..
T Consensus       385 ~~~giRiGt~~lt~~g~~~~d~~~ia~~i  413 (475)
T PLN03226        385 VPGGVRIGTPAMTSRGLVEKDFEKVAEFL  413 (475)
T ss_pred             CCCCcccCcHHHHHCCCCHHHHHHHHHHH
Confidence            3456787544 444456789999998874

>PRK08636 aspartate aminotransferase; Provisional

Probab=94.59  E-value=0.58  Score=46.27  Aligned_cols=172  Identities=6%  Similarity=-0.031  Sum_probs=86.2

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .+|++++|.||+...+--.|.. -......-.+|       ++|.++ .| +=+|.+++++++.+.+..  .... ....
T Consensus       205 ~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~--~~~~-~~~~  280 (403)
T PRK08636        205 KKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKK--IKSW-LDYG  280 (403)
T ss_pred             HHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHH--HHHH-hccc
Confidence            4679999999998866322211 11111110123       579994 77 489999999999887653  1100 0011


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .++... .++..++..  +.+++ .+..++.-+.+.+.|+    +++. ..+. .-|+++.+.+.+..      +.....
T Consensus       281 ~~~~~q-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~-~~~~p~~g~~~~~~l~~~~------~~~~~~  348 (403)
T PRK08636        281 MFTPIQ-VAATIALDGDQSCVEEIRETYRKRRDVLIESFA----NAGW-ELQKPRASMFVWAKIPEPA------RHLGSL  348 (403)
T ss_pred             CChHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH----HCCC-cccCCCcceEEEEECCCcc------CCCCHH
Confidence            122222 222233321  22222 1222333333333333    3332 2122 34677777764211      000124


Q ss_pred             HHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...++ ++||.+.+..    ...+.+||.  +.   .+++++.+.++..
T Consensus       349 ~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~--~~---~~~~~l~~~~~rl  394 (403)
T PRK08636        349 EFSKQLLTEAKVAVSPGIGFGEYGDEYVRIA--LI---ENENRIRQAARNI  394 (403)
T ss_pred             HHHHHHHHhCCEEEecchhhCcCCCCeEEEE--ec---CCHHHHHHHHHHH
Confidence            4666544 6899998852    124678874  22   2578888888764

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=94.59  E-value=0.6  Score=47.41  Aligned_cols=174  Identities=11%  Similarity=0.036  Sum_probs=86.6

Q ss_pred             ccccceEEehhHhhchhccchhh-hh----cccCC-c-ch-------HHHhhc-CCccccceeee-chhHHHhhhhhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GF----QCLQI-C-RF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQ   68 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~----e~~GV-~-PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~   68 (329)
                      ..|++.+|.||+...+-..+.-| ..    ...+. . |+       ++|.++ .|+ =+|.+++ .+++.+.+..  ..
T Consensus       230 ~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~Gl-RvG~ivs~n~~l~~~~~~--~~  306 (447)
T PLN02607        230 VRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARR--MS  306 (447)
T ss_pred             HHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcc-eEEEEEEcCHHHHHHHHH--Hh
Confidence            45799999999998732222111 11    11121 1 44       579997 785 7898887 5566655432  10


Q ss_pred             cCCCCccchhhhccHHHHHHHHh-hHHhH-HH----HHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCC
Q psy7882          69 ILKTPAHKLKISDTVRPHVQIKK-SVLER-FV----HTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKET  141 (329)
Q Consensus        69 ~~~~~~hg~T~agnlA~aaala~-~ile~-le----~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~  141 (329)
                         .+...++.+. .++++.+.. +.+++ ++    ++++.-+.+.+.|+    ++++ ..+++ -|+++-+++..... 
T Consensus       307 ---~~~~~s~~~q-~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~----~~gi-~~~~~~ag~fvw~~L~~~~~-  376 (447)
T PLN02607        307 ---SFTLVSSQTQ-HLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLR----RAGI-ECLKGNAGLFCWMNLSPLLE-  376 (447)
T ss_pred             ---hcCCCCHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH----hCCC-CcccCCeeEEEEEEchHhhc-
Confidence               0111122221 333444554 44332 11    12222223333333    3443 22333 47888888843110 


Q ss_pred             CCCCChHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .+ ..+...+++..+++ .||++.|...    ..+.+|+.    .+..+++++++.++..
T Consensus       377 -~~-~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~----fa~~~~~~l~~gl~Ri  431 (447)
T PLN02607        377 -TP-TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVC----FANMSEDTLEVALKRI  431 (447)
T ss_pred             -CC-CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE----eccCCHHHHHHHHHHH
Confidence             00 01223456666665 7999987421    24566663    2222478888888764

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=94.52  E-value=0.69  Score=46.61  Aligned_cols=171  Identities=13%  Similarity=0.015  Sum_probs=95.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH---H--HhhcCCccccceeeechhHHHhhhhhhhc--cCC------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILK------   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~------   71 (329)
                      ..+|+++++|=+|. .| .   ...+.-.+..|+   +  |.|.|-. .+|++.+++++.+.+.+-..+  +..      
T Consensus       189 ~~~ga~v~VDaaq~-~~-h---~~idv~~l~~Df~afsgHKwl~gP~-GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~  262 (405)
T COG0520         189 HEHGALVLVDAAQA-AG-H---LPIDVQELGCDFLAFSGHKWLLGPT-GIGVLYVRKELLEELEPFLGGGGMIEYVSRDE  262 (405)
T ss_pred             HHcCCEEEEECccc-cC-c---cCCCchhcCCCEEEEcccccccCCC-ceEEEEEchHHHhhcCCcccCCCceeeecccc
Confidence            35789999998887 21 1   122222234562   2  9887752 689999999999876430000  000      


Q ss_pred             --------CCccchhhhcc--HHHHHHHHhhHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeE----EeeceeeEEEe
Q psy7882          72 --------TPAHKLKISDT--VRPHVQIKKSVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDV----RGKGLMIGVDL  135 (329)
Q Consensus        72 --------~~~hg~T~agn--lA~aaala~~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~V----RG~GLm~gIef  135 (329)
                              .-.-++|..-.  ++..++++  .+++  ++++.+....|.+.+.+..+..|.+.-.    ..++.++++.+
T Consensus       263 ~~~~~~~p~rfe~gTpn~~~~i~l~aAl~--~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v  340 (405)
T COG0520         263 GVTLAELPLRFEAGTPNIAGAIGLAAALD--YLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNV  340 (405)
T ss_pred             cccccCcchhhccCCchHHHHHhHHHHHH--HHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEe
Confidence                    00112333222  33333433  3333  4445555555555444444444533111    13566677666


Q ss_pred             ecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCC-----------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLS-----------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~-----------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...          ....+...+-++||.++. |++           ...+|+.+.+--   |++|||.+++++
T Consensus       341 ~~~----------~~~dv~~~L~~~gI~vr~-g~~ca~p~~~~~~~~~~iR~S~~~YN---t~edid~l~~aL  399 (405)
T COG0520         341 KGI----------HPHDVATLLDEKGIAVRA-GHHCAQPLHRLLGVDATIRASLHLYN---TEEDVDRLLEAL  399 (405)
T ss_pred             CCC----------CHHHHHHHHHhCCeEEEe-ccccccHHHHhcCCCCceEEEEeecC---CHHHHHHHHHHH
Confidence            421          245688889999977765 321           233899988766   589999999985

>PRK07683 aminotransferase A; Validated

Probab=94.51  E-value=0.71  Score=45.40  Aligned_cols=168  Identities=8%  Similarity=-0.013  Sum_probs=83.7

Q ss_pred             cccceEEehhHhhchhccchhhhhccc-CCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+|+++|.||+...+-..+.......+ +. |+       ++|.++ -|+ =+|.+++++++.+.+..  .... .....
T Consensus       192 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~SK~~~~pGl-RiG~i~~~~~l~~~~~~--~~~~-~~~~~  266 (387)
T PRK07683        192 DKNIFVLSDEIYSELVYEQPHTSIAHFPEM-REKTIVINGLSKSHSMTGW-RIGFLFAPSYLAKHILK--VHQY-NVTCA  266 (387)
T ss_pred             HcCeEEEEecccccceeCCCcCChhhccCC-cCCeEEEeeccccccCccc-eeEEEEcCHHHHHHHHH--HHHh-ccCCC
Confidence            468999999999876322211111111 22 33       579998 774 88999999998887753  1100 01111


Q ss_pred             hhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          77 LKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        77 ~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++++. .++.+.+..  ..+++ .++.++.-+.+.+.|.+    ++. .-.... |+++.+.+....     .+   ...
T Consensus       267 ~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~-~~~~~~~~~~~~~~~~~~~-----~~---~~~  332 (387)
T PRK07683        267 SSISQ-YAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGL-DVEKPTGAFYLFPSIGHFT-----MS---SFD  332 (387)
T ss_pred             ChHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCC-cccCCCeeEEEEEecccCC-----CC---HHH
Confidence            22211 222333433  22222 22333444444444443    232 111233 444444443211     01   123


Q ss_pred             HHHH-HHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDS-CKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~-l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +... +.++||++.++..    ..+.+||.  +..   +++++.+.++..
T Consensus       333 ~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~--~~~---~~~~~~~al~~l  377 (387)
T PRK07683        333 FALDLVEEAGLAVVPGSAFSEYGEGYVRLS--YAY---SIETLKEGLDRL  377 (387)
T ss_pred             HHHHHHHhCCEEEcCchhhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            5444 5678999988531    24678874  332   477888888764

>PRK08354 putative aminotransferase; Provisional

Probab=94.46  E-value=0.9  Score=43.30  Aligned_cols=148  Identities=9%  Similarity=-0.008  Sum_probs=74.2

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+|+++|.||+..+|..-+.       ...++       ++|.++ .|+ -+|.+++   +.+.+..        .....
T Consensus       148 ~~~~~li~De~y~~f~~~~~-------~~~~~~vi~~~S~SK~~~l~Gl-RiG~~v~---~~~~l~~--------~~~~~  208 (311)
T PRK08354        148 DRNALLILDEAFIDFVKKPE-------SPEGENIIKLRTFTKSYGLPGI-RVGYVKG---FEEAFRS--------VRMPW  208 (311)
T ss_pred             hcCcEEEEeCcchhcccccc-------ccCCCcEEEEeccHhhcCCccc-eeeeeee---hHHHHHH--------cCCCc
Confidence            57999999999988843221       11233       689998 884 8887777   3344432        01111


Q ss_pred             hhhcc-HHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          78 KISDT-VRPHVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        78 T~agn-lA~aaala~~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      +.+.. .+.+.++..+-   .+++++.-+.+.+..+.+....    .+.+.|.++-+++..            ...+.+.
T Consensus       209 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~------------~~~~~~~  269 (311)
T PRK08354        209 SIGSTGYAFLEFLIEDD---FEHLRKTMPLIWREKERFEKAL----YVKSDANFFIKDVGD------------AEKFVEF  269 (311)
T ss_pred             cCCHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhc----CCCCCCcEEEEECCC------------HHHHHHH
Confidence            11111 22222221111   2223333333444444332211    123444444454321            2347778


Q ss_pred             HHHCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.++...  ++.+||.-    .  +.++.+.+++++
T Consensus       270 l~~~gv~v~~g~~f~~~~~iRi~~----~--~~~~~~~l~~al  306 (311)
T PRK08354        270 LKRNGILVRDCTSFGLPGYIRFSV----R--DREENEKLIRAL  306 (311)
T ss_pred             HHHCCeEEEecccCCCCCeEEEEe----C--CHHHHHHHHHHH
Confidence            89999999986422  35666642    1  345566666553

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=94.42  E-value=0.39  Score=47.31  Aligned_cols=170  Identities=10%  Similarity=-0.045  Sum_probs=91.1

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-HHHhhcCCccc-cceeeechhHHHhhhhh-h-h---c-cCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-VQKDFKGSFWD-KLIVHTSTCTFENFIKI-K-Y---Q-ILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i~KaLgGG~~P-igAv~~~~eI~d~~~~~-~-~---~-~~~~~~hg~T   78 (329)
                      +|+++|+|=||+ +|-  .-.-.+.+++--= --|.+  | .| +|++.++++..+.+.+. . +   . ........+|
T Consensus       165 ~g~l~vVDavss-~g~--~~idv~~~d~~~~ssqK~l--g-P~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~T  238 (360)
T PRK05355        165 GDVPLVADMSSD-ILS--RPIDVSKFGLIYAGAQKNI--G-PAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNT  238 (360)
T ss_pred             CCCcEEEEcCcc-ccC--ccCCHHHccEEEEeccccc--c-CCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCC
Confidence            789999999988 321  1122222220000 12987  3 35 89999999988765430 0 0   0 0000111122


Q ss_pred             hhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          79 ISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        79 ~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      -+-+  .++.++++-  +.  ++. .++.+++.++++++|+++- -+....  ..| .+...++.+..         ...
T Consensus       239 p~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~-~~~~~~~~~~r-s~~v~sf~~~~---------~~~  307 (360)
T PRK05355        239 PPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD-FYRNPVAPEDR-SRMNVPFTLAD---------EEL  307 (360)
T ss_pred             CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC-CcccCCChhhc-CCcEEEEEcCC---------hHH
Confidence            2222  344444443  11  333 5566677777777776652 111111  122 23455555432         112


Q ss_pred             HHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+...+.++|+.+ ..+.. ..++|+++-.-.   |.+|||.+++++
T Consensus       308 ~~~~~~~~~~~Gi~~-~~~~~~~g~vRiS~~~~n---t~eei~~l~~~l  352 (360)
T PRK05355        308 DKKFLAEAKAAGLVG-LKGHRSVGGMRASIYNAM---PLEGVQALVDFM  352 (360)
T ss_pred             HHHHHHHHHHCCCcc-cCCCCccCcEEEECCCCC---CHHHHHHHHHHH
Confidence            355777888999998 44432 468999985555   589999999985

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=94.37  E-value=1.2  Score=45.56  Aligned_cols=173  Identities=12%  Similarity=0.043  Sum_probs=99.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCc-ch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      -.+||+.+|=|++..=|.-.+.--. ...+.. |+       ++|.|.=|+ =+|-+++.+++.+.+......   ...|
T Consensus       256 A~~~~~~IIEDD~y~el~~~~~p~~-~l~~ld~~~rViy~gSFSK~l~Pgl-RlG~vv~p~~~~~~~~~~k~~---~~~~  330 (459)
T COG1167         256 AEKYDVLIIEDDYYGELRYDGPPPP-PLKALDAPGRVIYLGSFSKTLAPGL-RLGYVVAPPELIEKLLRLKQA---ADLG  330 (459)
T ss_pred             HHHcCCeEEeeCcchhhhcCCCCCC-ChHhhCCCCCEEEEeeehhhccccc-ceeeeeCCHHHHHHHHHHHHH---hcCC
Confidence            3578999999999877744432110 011111 34       679999995 899999999988887641011   1234


Q ss_pred             chhhhccHHHHHHHHhhHHhHHHHHHHHHHHHHH---HHHHHHHhC-CceeeEEe--eceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLT---HLSKLREEF-AIVGDVRG--KGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agnlA~aaala~~ile~le~v~~lG~~L~~---gL~eL~~~~-p~v~~VRG--~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +++++.. +.+..+....+++  |++++-..+++   .+.+...+| |....+.+  -|+++.+++...      ++   
T Consensus       331 ~s~~~Q~-~la~~l~~G~~~~--hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~------~~---  398 (459)
T COG1167         331 PSSLSQA-ALAAFLLSGHYDR--HLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG------ID---  398 (459)
T ss_pred             CChHHHH-HHHHHHHcCCHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC------CC---
Confidence            4444322 2222233322322  33333333322   233333334 32223332  288888888642      11   


Q ss_pred             HHHHHHHHHHCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+...+.++||.+.+.|.       ..+.+||.....    ++++|++.+..+
T Consensus       399 ~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~----~~e~i~~gi~~l  449 (459)
T COG1167         399 ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP----SEEEIEEGIKRL  449 (459)
T ss_pred             HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC----CHHHHHHHHHHH
Confidence            45689999999999998442       245788876544    478888888864

>PLN02651 cysteine desulfurase

Probab=94.34  E-value=0.25  Score=48.09  Aligned_cols=101  Identities=9%  Similarity=-0.123  Sum_probs=51.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhc--cCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQ--ILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~--~~~~~~hg~   77 (329)
                      ..+|+++++|.+|+. |..  .+-.+.+|  .|+     -| + +|-..+|++.++++..+.+.+...+  ....+. ++
T Consensus       165 ~~~g~~~~vD~a~~~-g~~--~~~~~~~~--~D~~~~s~hK-~-~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~-~G  236 (364)
T PLN02651        165 REKKVLFHTDAAQAV-GKI--PVDVDDLG--VDLMSISGHK-I-YGPKGVGALYVRRRPRVRLEPLMSGGGQERGRR-SG  236 (364)
T ss_pred             HHcCCEEEEEcchhh-CCc--ccCcccCC--CCEEEechhh-h-CCCCceEEEEEcCCCCCCCCccccCCCccCCcc-CC
Confidence            357999999999983 221  12233334  582     28 5 4422478888898766544321000  000011 22


Q ss_pred             hhhcc--HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHH
Q psy7882          78 KISDT--VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSK  113 (329)
Q Consensus        78 T~agn--lA~aaala~--~ile~-le~v~~lG~~L~~gL~e  113 (329)
                      |-+-.  +++.++++-  +..++ .++.+++.+++.++|++
T Consensus       237 T~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~  277 (364)
T PLN02651        237 TENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA  277 (364)
T ss_pred             CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence            32222  444444432  22222 45677777777777754

>PRK08363 alanine aminotransferase; Validated

Probab=94.22  E-value=1.1  Score=44.16  Aligned_cols=176  Identities=10%  Similarity=0.043  Sum_probs=81.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch------HHHh-hcCCccccceeee--chhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKD-FKGSFWDKLIVHT--STCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~Ka-LgGG~~PigAv~~--~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|.||+...+-..|..-....+.-.+.      ++|. ...| +=+|.+++  .+++.+.+.............
T Consensus       196 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~  274 (398)
T PRK08363        196 GEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLC  274 (398)
T ss_pred             HHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhccccc
Confidence            356999999999876532232111111110111      6799 4566 47888886  555544433200000000011


Q ss_pred             chhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCCCChHHHH
Q psy7882          76 KLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        76 g~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p~~~~~~~  151 (329)
                      .++.+. .++++++..  +.+++ .++.++.-+++.+.|++    ++.+.-....|.++. +.+....     .... ..
T Consensus       275 ~s~~~q-~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~~~~~~l~~~~-----~~~~-~~  343 (398)
T PRK08363        275 PNTPAQ-FAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE----IPGISTTKPQGAFYIFPRIEEGP-----WKDD-KE  343 (398)
T ss_pred             CChHHH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc----CCCCEecCCCeEEEEEEEeccCC-----CCCH-HH
Confidence            122111 233344432  33333 33344444444444433    333221233344433 3553210     0001 12


Q ss_pred             HHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...+.++||++.++..    ..+.+|+.  +..   +++++.+.++..
T Consensus       344 ~~~~~l~~~gV~v~~g~~f~~~~~~~iRis--~~~---~~~~l~~~l~~l  388 (398)
T PRK08363        344 FVLDVLHEAHVLFVHGSGFGEYGAGHFRLV--FLP---PVEILEEAMDRF  388 (398)
T ss_pred             HHHHHHHhCCEEEeCchhhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            234556789999987532    13567775  222   478888888764

>KOG1360|consensus

Probab=94.17  E-value=1  Score=45.63  Aligned_cols=167  Identities=10%  Similarity=0.007  Sum_probs=88.7

Q ss_pred             CccccccceEEehhHhhchhccchhh--hhcccCCcc--h-----HHHhhc--CCccccceeeechhHHHhhhhhhhccC
Q psy7882           2 DTTYYRDCGVVVSAVDFGSGDNGTYL--GFQCLQICR--F-----VQKDFK--GSFWDKLIVHTSTCTFENFIKIKYQIL   70 (329)
Q Consensus         2 ~~~~~~giLLI~DEVqTGfGRTG~~f--A~e~~GV~P--D-----i~KaLg--GG~~PigAv~~~~eI~d~~~~~~~~~~   70 (329)
                      |+...+|++--+|||.. .|..|..+  --|+-||-+  |     ++|++|  |||     +..+..+.|.+..      
T Consensus       327 Dvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGY-----IAat~~LvDmiRS------  394 (570)
T KOG1360|consen  327 DVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGY-----IAATRKLVDMIRS------  394 (570)
T ss_pred             HHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhcccccce-----ehhhhhHHHHHHH------
Confidence            66778999999999987 55555433  335567655  4     578886  454     4556667776543      


Q ss_pred             CCCccchhhhcc---HHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhC--CceeeEEeeceeeEEEeecCCCCC
Q psy7882          71 KTPAHKLKISDT---VRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEF--AIVGDVRGKGLMIGVDLVQDKETK  142 (329)
Q Consensus        71 ~~~~hg~T~agn---lA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~--p~v~~VRG~GLm~gIef~~d~~~~  142 (329)
                        +.-|--|+..   ..++-|++. +++..  -...++.-++-...++++..+.  |.+-.-   -=++-+-+.      
T Consensus       395 --yAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~p---SHIiPv~vg------  463 (570)
T KOG1360|consen  395 --YAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPNP---SHIIPVRVG------  463 (570)
T ss_pred             --hcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCCC---cceeeeecc------
Confidence              2222222222   333444444 44432  1112233333333344433332  222111   011122221      


Q ss_pred             CCCChHHHHHHHHHHH-HCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHILDSCK-EHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~-e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         +......+...++ ++|++++.-.     .+...+|+.|.   ..||.+-.+.+++++
T Consensus       464 ---da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT---P~HT~~mm~~lv~~l  518 (570)
T KOG1360|consen  464 ---DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT---PHHTPQMMNILVNAL  518 (570)
T ss_pred             ---CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC---CCCCHHHHHHHHHHH
Confidence               2356667777766 5899998532     24577899883   345777777777764

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=94.14  E-value=0.81  Score=45.28  Aligned_cols=169  Identities=8%  Similarity=-0.062  Sum_probs=84.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCc---ch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC---RF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~---PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      .++|+++|.||+..-+ ....    ......   .+       ++|....|+ -+|.+++.+++++.+..  ... ....
T Consensus       209 ~~~~~~iI~De~Y~~~-~~~~----~~~~~~~~~~~~vI~~~SfSK~~~pGl-RiG~~i~~~~l~~~~~~--~~~-~~~~  279 (416)
T PRK09440        209 RQHNIPLLIDNAYGPP-FPGI----IFSEATPLWNPNIILCMSLSKLGLPGV-RCGIVIADEEIIEALSN--MNG-IISL  279 (416)
T ss_pred             HHcCCcEEEeCCcccc-CCCc----chhhcCccccCCeEEEecccccCCCcc-eEEEEeCCHHHHHHHHH--HHH-Hhcc
Confidence            3579999999997421 1110    011111   12       579766674 78999999999887753  110 0011


Q ss_pred             cchhhhccHHHHHHHHh-hHHhHHH-----HHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh
Q psy7882          75 HKLKISDTVRPHVQIKK-SVLERFV-----HTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        75 hg~T~agnlA~aaala~-~ile~le-----~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~  147 (329)
                      +.++++. .++++++.. +..+.+.     ..++.-+.+++.|++.....+ +.-+... |+++-+++....     .+ 
T Consensus       280 ~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~-~~~~~p~gg~fiw~~~~~~~-----~~-  351 (416)
T PRK09440        280 APGRLGP-AIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEP-CLIHKPEGAIFLWLWFKDLP-----IT-  351 (416)
T ss_pred             CCCcHHH-HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-eEEecCCCceEEEEECCCCC-----CC-
Confidence            2222221 233344443 3221111     112222233333333221111 1112333 677777774211     11 


Q ss_pred             HHHHHHHHHHHHCCceeeccCC---C--------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL---S--------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~---~--------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        ...+.+.|.++||.+.++..   .        .+.+|+.-  ..   ++++++++++.+
T Consensus       352 --~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~--~~---~~~~l~~~i~~l  405 (416)
T PRK09440        352 --TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNY--VQ---DDEEIEKGIAIL  405 (416)
T ss_pred             --HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEe--cC---CHHHHHHHHHHH
Confidence              24567778899999988421   1        13677752  21   478899988874

>KOG1358|consensus

Probab=93.94  E-value=0.069  Score=53.43  Aligned_cols=175  Identities=13%  Similarity=0.008  Sum_probs=90.9

Q ss_pred             ccccceEEehhHhhchhccch--hhhhcccCCcch----HHHhhcCCccccce-eeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF----VQKDFKGSFWDKLI-VHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD----i~KaLgGG~~PigA-v~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .++..-+|+||-.+ ||-.|+  .+-.+|+||.++    +.-++.+++.-.|+ +.|+.-+.+.      +.  -.+.+-
T Consensus       260 ~Kyk~RvildEs~S-fG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~h------Qr--LSg~~Y  330 (467)
T KOG1358|consen  260 NKYKFRVILDESLS-FGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADH------QR--LSGSGY  330 (467)
T ss_pred             hhheEEEEEecccc-cccccccCccccccCCCCccceeeeeecccccccccCceeecceeeEee------ee--ccccce
Confidence            45567899999876 554443  457899999876    22233333222222 3344333221      11  123445


Q ss_pred             hhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEee--ceeeEEEeecCCCCCCCCCh
Q psy7882          78 KISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK--GLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        78 T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~--GLm~gIef~~d~~~~~p~~~  147 (329)
                      .|++.   +.+.+|++. .++++    ++.++.+...+.+.|+..     .-..|+|.  -.++.+.+.....+++. ..
T Consensus       331 ~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~-----s~~~v~~~~~SPi~hl~l~~~~~s~e~-e~  404 (467)
T KOG1358|consen  331 CFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSN-----SGFIVSGSPESPIIHLQLERSYGSREK-EE  404 (467)
T ss_pred             eeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcC-----CceEEecCcCCceeeeeecccccchHH-HH
Confidence            56666   233344555 55554    344555555555555441     11244553  34555555432111100 01


Q ss_pred             HHHHHHHHHHHHCCceeeccCC--------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL--------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~--------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...+...|+.+|+++..+..        ....+|++   +...++++||+.+.+..
T Consensus       405 ~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~---~~a~~seeel~ra~~~i  459 (467)
T KOG1358|consen  405 KLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC---VSAGMSEEELERAAELI  459 (467)
T ss_pred             HHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE---EeCCCCHHHHHHHHHHH
Confidence            2467788888888988865421        12233432   45567899999998864

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=93.93  E-value=1.3  Score=45.26  Aligned_cols=137  Identities=11%  Similarity=-0.062  Sum_probs=69.0

Q ss_pred             cccceeee-c-hhHHHhhhhhhhccCCCCccc-hhhhcc-HHHHHHHHh---hHHhH--HHHHHHHHHHHHHHHHHHHHh
Q psy7882          47 WDKLIVHT-S-TCTFENFIKIKYQILKTPAHK-LKISDT-VRPHVQIKK---SVLER--FVHTYVVGNFLLTHLSKLREE  117 (329)
Q Consensus        47 ~PigAv~~-~-~eI~d~~~~~~~~~~~~~~hg-~T~agn-lA~aaala~---~ile~--le~v~~lG~~L~~gL~eL~~~  117 (329)
                      .|.|++++ + +++++.+..     .....|+ .||++. ..|.+|++.   +.+++  ++...+.-++|.+.|++.  .
T Consensus       264 ~~~GG~i~~~d~~l~~~~~~-----~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~--G  336 (460)
T PRK13238        264 VNIGGLLCFRDEDLFTECRT-----LCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA--G  336 (460)
T ss_pred             CcceeEEEcChHHHHHHhhh-----cccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC--C
Confidence            36655555 4 456655432     1112455 488886 665666554   33332  332233346677777663  4


Q ss_pred             CCceeeEEeeceeeEEEeecCCC--CCCCCChHHHHHHHHHH-HHCCceeeccC-----C----------CCCEEEEeCc
Q psy7882         118 FAIVGDVRGKGLMIGVDLVQDKE--TKVPLNSRHMTHILDSC-KEHGLLLGRGG-----L----------SGNTLTALQP  179 (329)
Q Consensus       118 ~p~v~~VRG~GLm~gIef~~d~~--~~~p~~~~~~~~~~~~l-~e~GVLl~~~G-----~----------~~nvIrl~PP  179 (329)
                      .+.+....|  ..+-+++..-.+  ....|+   ...++..| .+.||.+.+.+     .          ..+.+||+=|
T Consensus       337 ~~~~~p~Gg--~~v~~d~~~~~~~~~~~~~~---~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~  411 (460)
T PRK13238        337 VPIQTPAGG--HAVFVDAGKFLPHIPAEQFP---AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP  411 (460)
T ss_pred             CCeEccCCc--eEEEEEchhcCCCCCCCCCc---hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc
Confidence            555544444  333344422100  001111   24455444 57899887643     1          1377888766


Q ss_pred             cccCcCCHHHHHHHHhcc
Q psy7882         180 KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       180 L~It~~t~eeId~~l~~~  197 (329)
                      ==..  |++++|.+.+++
T Consensus       412 rr~~--~~~~~~~~~~~l  427 (460)
T PRK13238        412 RRVY--TQSHMDYVAEAL  427 (460)
T ss_pred             cccC--CHHHHHHHHHHH
Confidence            3111  578888887764

>PRK06460 hypothetical protein; Provisional

Probab=93.73  E-value=0.72  Score=45.67  Aligned_cols=115  Identities=10%  Similarity=-0.018  Sum_probs=59.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..+|+++|+||++..+ -..     .......|     ++|.++|.- .=.|.+++++++.+.+..  ..    ...+.+
T Consensus       157 ~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~--~~----~~~g~~  224 (376)
T PRK06460        157 KENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQ--MR----RTLGTS  224 (376)
T ss_pred             HHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHH--HH----HhcCCC
Confidence            3579999999997532 111     11111246     459986410 125677788888776653  10    011111


Q ss_pred             hhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEee
Q psy7882          79 ISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLV  136 (329)
Q Consensus        79 ~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~  136 (329)
                      .+. .++..++.. +.++. ++++.+..++|.+.|++    ||.+..                  .+|.|.|++|++.
T Consensus       225 ~~~-~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~  297 (376)
T PRK06460        225 LDP-HAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEG----HPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN  297 (376)
T ss_pred             CCH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHc----CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence            111 222222233 33433 55555655666665553    333322                  2477888888885

>PRK05839 hypothetical protein; Provisional

Probab=93.72  E-value=1.1  Score=43.83  Aligned_cols=163  Identities=9%  Similarity=-0.007  Sum_probs=81.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhccc----CC-cch-------HHHhh-cCCccccceeeechhHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL----QI-CRF-------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~----GV-~PD-------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~~~   71 (329)
                      ..+|+++|.||+...|...+...+....    +. ..|       ++|.+ ..| +=+|.+++++++.+.+..  ... .
T Consensus       185 ~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~--~~~-~  260 (374)
T PRK05839        185 LKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKA--YRT-Y  260 (374)
T ss_pred             HHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHH--HHh-h
Confidence            3579999999998877322221111110    11 112       67985 456 489999999998887653  100 0


Q ss_pred             CCccchhhhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          72 TPAHKLKISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        72 ~~~hg~T~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      ...+.++.+. .++.+++.. +.++      ++-+.+++..+.+.+..+..  .-.-|+++-+.+.+            .
T Consensus       261 ~~~~~~~~~q-~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~l~~~--~p~gg~fi~~~~~~------------~  319 (374)
T PRK05839        261 LGCASPLPLQ-KAAAVAWLDDEHAE------FFRNIYAKNLKLAREILGIT--IPPATFYVWLPVDN------------D  319 (374)
T ss_pred             cCCCCChHHH-HHHHHHhccchHHH------HHHHHHHHHHHHHHHhcCCC--CCCeeEEEEEeCCC------------h
Confidence            0011111111 222223322 3322      22222333332222211111  11235566665531            1


Q ss_pred             HHHHHHHHH-CCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKE-HGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e-~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|.+ +||.+.++..      ..+.+|+.=  .   .+++++.+.++..
T Consensus       320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~---~~~~~~~~~l~~l  368 (374)
T PRK05839        320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--V---YDTPKLEKALEII  368 (374)
T ss_pred             HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--c---CCHHHHHHHHHHH
Confidence            346777765 9999988421      136788752  2   2578888888764

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=93.65  E-value=1.2  Score=45.40  Aligned_cols=174  Identities=10%  Similarity=0.023  Sum_probs=85.8

Q ss_pred             cccceEEehhHhhchhccchhh-h-hccc------CC-cch-------HHHhhc-CCccccceeeechh-HHHhhhhhhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL-G-FQCL------QI-CRF-------VQKDFK-GSFWDKLIVHTSTC-TFENFIKIKY   67 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f-A-~e~~------GV-~PD-------i~KaLg-GG~~PigAv~~~~e-I~d~~~~~~~   67 (329)
                      .||+.+|.||+...+-..+.-+ . ....      +. .++       ++|.++ .|+ =+|.+++..+ +.+.+..  .
T Consensus       222 ~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~li~~~~~l~~~~~~--~  298 (468)
T PLN02450        222 AKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGF-RVGAIYSNDEMVVSAATK--M  298 (468)
T ss_pred             HCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCc-cEEEEEECCHHHHHHHHH--H
Confidence            5799999999998764343211 1 1111      11 123       679997 885 8999998754 4554432  1


Q ss_pred             ccCCCCccchhhhccHHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          68 QILKTPAHKLKISDTVRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        68 ~~~~~~~hg~T~agnlA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                      .   .+...++.+. .+++++++. +.    +++ .+.+++.-+.+.+.|+    +++.....-.-|+++-+.+......
T Consensus       299 ~---~~~~~s~~~Q-~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~----~~gi~~~~~~~g~flwi~l~~~~~~  370 (468)
T PLN02450        299 S---SFGLVSSQTQ-YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLE----AAGIKCLKSNAGLFCWVDMRHLLKS  370 (468)
T ss_pred             h---hcCCCCHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH----HcCCcccCCCceEEEEEEchHhcCc
Confidence            1   1111122111 344444544 22    221 2223333333333333    3433111122466777777421100


Q ss_pred             CCCCChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..+  +....++..+. ++||.+.|...    ..+.+|+.    .+..+++++++.++..
T Consensus       371 -~~~--~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~----f~~~~~~~l~~~l~ri  424 (468)
T PLN02450        371 -NTF--EAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC----FANMSEETLDLAMKRL  424 (468)
T ss_pred             -CCc--hHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE----ecCCCHHHHHHHHHHH
Confidence             011  11234556655 58999988531    24567764    2222578888888864

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=93.60  E-value=1.7  Score=43.03  Aligned_cols=172  Identities=6%  Similarity=-0.115  Sum_probs=83.1

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhh--------h-h
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIK--------I-K   66 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~--------~-~   66 (329)
                      .+|++++|.||+...|-..+... ....+.-.++       ++|.++ .|+ =+|.+++.+++.+.+..        . .
T Consensus       206 ~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl-RiG~~i~~~~li~~~~~~~~~~~~~~~~  284 (409)
T PRK07590        206 KENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGT-RCAYTVVPKELKGKTSDGEGVSLNSLWN  284 (409)
T ss_pred             HHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCc-eeEEEEcCHHHhhhccccchhhhHHHHH
Confidence            45799999999988773323210 1111110122       579996 774 78999999888763210        0 0


Q ss_pred             hccCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCC
Q psy7882          67 YQILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKET  141 (329)
Q Consensus        67 ~~~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~  141 (329)
                      ......+.+.++.+. .++++++..   +.+++ .+..++.-+.+.+.|+    .++ +.-..+. |.++-+.+...   
T Consensus       285 ~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~-~~~~~~~g~~f~wi~~~~~---  355 (409)
T PRK07590        285 RRQSTKFNGVSYIVQ-RAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE----SAG-FEVYGGVNAPYIWVKTPDG---  355 (409)
T ss_pred             HHHhhcccCcCHHHH-HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH----hcC-CceecCCcceEEEEECCCC---
Confidence            000000011111111 223333322   12221 2223333333333333    333 2112233 45666666421   


Q ss_pred             CCCCChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         .+   ...+...+. ++||++.++..    ..+.+|+.  +..   +++++++.++..
T Consensus       356 ---~~---~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~---~~~~l~~~l~rl  405 (409)
T PRK07590        356 ---MS---SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFG---SRENVLEAMERI  405 (409)
T ss_pred             ---CC---HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccC---CHHHHHHHHHHH
Confidence               11   234666665 57999987521    13578876  222   578899888764

>PRK06836 aspartate aminotransferase; Provisional

Probab=93.36  E-value=1.1  Score=44.26  Aligned_cols=164  Identities=9%  Similarity=-0.019  Sum_probs=80.2

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHh--hhhhhhccCCCCccch
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFEN--FIKIKYQILKTPAHKL   77 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~--~~~~~~~~~~~~~hg~   77 (329)
                      ||+++|.||+...|-..|.... ......+.      ++|.++ .|+ -+|.+.+++++.+.  +....... . ...+ 
T Consensus       206 ~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~~~~~~~~-~-~~~~-  280 (394)
T PRK06836        206 RPIYLISDEPYREIVYDGAEVP-YIFKYYDNSIVVYSFSKSLSLPGE-RIGYIAVNPEMEDADDLVAALVFA-N-RILG-  280 (394)
T ss_pred             CCeEEEEeccccccccCCCCCC-ChHHccCcEEEEecchhhccCcce-eeEEEecCHHHhhhHHHHHHHHHH-h-hccc-
Confidence            7999999999987743221100 00111122      679998 674 88999988876432  11100000 0 0001 


Q ss_pred             hhhcc-HHH---HHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          78 KISDT-VRP---HVQIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        78 T~agn-lA~---aaala~~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ..+.+ +..   +..+.... . ....++.-+.+.+.|+    +++.. -... -|+.+.+.+.. .      +   ...
T Consensus       281 ~~~~~~~~q~~~~~~l~~~~-~-~~~~~~~r~~l~~~L~----~~g~~-~~~~~gg~~~~~~~~~-~------~---~~~  343 (394)
T PRK06836        281 FVNAPALMQRVVAKCLDATV-D-VSIYKRNRDLLYDGLT----ELGFE-CVKPQGAFYLFPKSPE-E------D---DVA  343 (394)
T ss_pred             cccCCHHHHHHHHHHhCChH-H-HHHHHHHHHHHHHHHH----hCCCE-eecCCceEEEEEeCCC-C------C---HHH
Confidence            01122 222   22221111 0 2223333344444443    34321 1212 25555554421 1      1   234


Q ss_pred             HHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||.+.++..  .++.+||.-.  .   +++++.+.++..
T Consensus       344 ~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~---~~~~~~~~i~~l  385 (394)
T PRK06836        344 FCEKAKKHNLLLVPGSGFGCPGYFRLSYC--V---DTETIERSLPAF  385 (394)
T ss_pred             HHHHHHhCCEEEECchhcCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence            66888899999988531  2467887542  2   578988888765

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=93.25  E-value=1.8  Score=42.54  Aligned_cols=173  Identities=11%  Similarity=0.013  Sum_probs=88.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-HHHhhcCCccc-cceeeechhHHHhhhhhhhccC--CC-Cccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-VQKDFKGSFWD-KLIVHTSTCTFENFIKIKYQIL--KT-PAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~~~--~~-~~hg~T~   79 (329)
                      ..+|+++|+|=||+ +|-.  -.-.+.+++--= --|++|   .| +|++.++++..+.+.+......  .. ..+..++
T Consensus       152 ~~~~~l~iVDavss-~g~~--~id~~~~d~~~~ssqK~lg---P~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (349)
T TIGR01364       152 DVKNAPLVADMSSN-ILSR--PIDVSKFGLIYAGAQKNIG---PAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY  225 (349)
T ss_pred             ccCCCeEEEEcccc-ccCc--cCCHHHccEEEEecccccC---CCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC
Confidence            34689999999988 3211  111222221000 129873   36 8999999998876543100000  00 0011112


Q ss_pred             -hccH----HHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          80 -SDTV----RPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        80 -agnl----A~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                       +-|+    +..++++-  +  -++. .++-+++.++++++|+++-.-+....  ..|. ..+.++.+...         
T Consensus       226 ~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs-~~v~sf~~~~~---------  295 (349)
T TIGR01364       226 NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRS-RMNVVFTLGNE---------  295 (349)
T ss_pred             CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcC-CeEEEEecCCh---------
Confidence             2223    33333332  1  1333 45556666666666665511001111  1221 24455554321         


Q ss_pred             HHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+...+.++|+.+.+ +. ...++|+.+-...   |.+|||.+++++
T Consensus       296 ~~~~~~~~~~~~~Gi~~~~-~~~~~g~vRvS~~~~n---t~edid~l~~al  342 (349)
T TIGR01364       296 ELEKRFLKEAEERGLVSLK-GHRSVGGMRASIYNAM---PLEGVQALVDFM  342 (349)
T ss_pred             hHhHHHHHHHHHCCCcccC-CccccCeeEEECcCCC---CHHHHHHHHHHH
Confidence            1235677788899995544 43 2468999985555   689999999985

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=92.90  E-value=2.9  Score=41.08  Aligned_cols=162  Identities=7%  Similarity=-0.060  Sum_probs=83.0

Q ss_pred             cccceEEehhHhhchhccch--h---h-hhcccCC-cch-------HHHhh-cCCccccceeeechhHHHhhhhhhhccC
Q psy7882           6 YRDCGVVVSAVDFGSGDNGT--Y---L-GFQCLQI-CRF-------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQIL   70 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~--~---f-A~e~~GV-~PD-------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~~   70 (329)
                      .|++++|.||+...+...+.  .   + .....+. ..|       ++|.+ ..| +=+|.+++.+++.+.+..  ... 
T Consensus       196 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~--~~~-  271 (393)
T TIGR03538       196 QYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLR--YRT-  271 (393)
T ss_pred             HCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHH--HHH-
Confidence            57999999999886643221  1   1 1111221 123       67974 455 478999999988877653  110 


Q ss_pred             CCCccchhhhcc-HHH---HHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882          71 KTPAHKLKISDT-VRP---HVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        71 ~~~~hg~T~agn-lA~---aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p  144 (329)
                         .+  +++.+ +..   .+++.. +.+++ .+..++.-+.+.+.|++.   .+.  ..-.-|+++-+++..       
T Consensus       272 ---~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~--~~p~gg~f~~~~~~~-------  334 (393)
T TIGR03538       272 ---YH--GCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV---LDL--ELPDAGFYLWPKVPG-------  334 (393)
T ss_pred             ---hh--ccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---Ccc--cCCCeeEEEEEECCC-------
Confidence               01  11122 222   223322 33332 223333334444444432   111  112236666666631       


Q ss_pred             CChHHHHHHHHHHH-HCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCK-EHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~-e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       +   ...+.+.++ ++||.+.+...          ..+.+|+.-  ..   +++++++.++..
T Consensus       335 -~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~~---~~~~l~~~l~~l  389 (393)
T TIGR03538       335 -D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--VA---PLEECVEAAERI  389 (393)
T ss_pred             -C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--cC---CHHHHHHHHHHH
Confidence             1   234677765 58999976431          135677753  22   468888888764

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=92.88  E-value=0.23  Score=49.18  Aligned_cols=53  Identities=15%  Similarity=-0.080  Sum_probs=34.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~   63 (329)
                      ..+|+++|+||++..+ -.     +.-....+|     +.|.++|....+ |++++++++.+.+.
T Consensus       166 ~~~gi~livD~a~~~~-~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~  224 (380)
T TIGR01325       166 HAIGALLVVDNVFATP-VL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVA  224 (380)
T ss_pred             HHcCCEEEEECCCccc-cc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHH
Confidence            3579999999998632 11     112233468     359998854455 77778888777665

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK05968 hypothetical protein; Provisional

Probab=92.85  E-value=0.94  Score=45.04  Aligned_cols=137  Identities=12%  Similarity=0.021  Sum_probs=70.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..+|+++|+|+.+... -...  .. .+|+  |     +.|.++|.--++ |++++++++++.+......     ..+..
T Consensus       174 ~~~gi~vivD~a~a~~-~~~~--p~-~~g~--Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~-----~~g~~  242 (389)
T PRK05968        174 KRHGVVTMIDNSWASP-VFQR--PI-TLGV--DLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYP-----YLGAK  242 (389)
T ss_pred             HHcCCEEEEECCCcch-hccC--ch-hcCC--cEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHH-----hCCCC
Confidence            4579999999987432 1111  11 1233  6     359998731233 5666788877665420000     11211


Q ss_pred             hhccHHHHHHHHh-hHHh-HHHHHHHHHHHHHHHHHHHHHhCCceeeEE-------------eeceeeEEEeecCCCCCC
Q psy7882          79 ISDTVRPHVQIKK-SVLE-RFVHTYVVGNFLLTHLSKLREEFAIVGDVR-------------GKGLMIGVDLVQDKETKV  143 (329)
Q Consensus        79 ~agnlA~aaala~-~ile-~le~v~~lG~~L~~gL~eL~~~~p~v~~VR-------------G~GLm~gIef~~d~~~~~  143 (329)
                      .+. ..++.++.. +-+. ++++-.+..+.+.+.|+    .+|.+..|.             |.|.|+.+++...     
T Consensus       243 ~~~-~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~----~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----  312 (389)
T PRK05968        243 LSP-FEAWLLLRGLRTLPLRMKAHEASALEIARRLK----AHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----  312 (389)
T ss_pred             CCh-HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----
Confidence            111 233333333 2222 24444445555555554    456665554             6788999998521     


Q ss_pred             CCChHHHHHHHHHHHHCCceeec
Q psy7882         144 PLNSRHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       144 p~~~~~~~~~~~~l~e~GVLl~~  166 (329)
                          ....+|+..|...++-+..
T Consensus       313 ----~~~~~f~~~L~~~~~~~s~  331 (389)
T PRK05968        313 ----IDVRAFADALKLFRLGVSW  331 (389)
T ss_pred             ----HHHHHHHHhCCccEEecCC
Confidence                1245677777655554433

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=92.63  E-value=2.6  Score=41.46  Aligned_cols=163  Identities=7%  Similarity=-0.039  Sum_probs=81.7

Q ss_pred             ccccceEEehhHhhchhccch--hhh-h---cccCC-cch-------HHHhh-cCCccccceeeechhHHHhhhhhhhcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT--YLG-F---QCLQI-CRF-------VQKDF-KGSFWDKLIVHTSTCTFENFIKIKYQI   69 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~--~fA-~---e~~GV-~PD-------i~KaL-gGG~~PigAv~~~~eI~d~~~~~~~~~   69 (329)
                      ..||+++|.||+..-|--.+.  ... .   ...+. ..|       ++|.+ ..| +-+|.+++++++.+.+..  .. 
T Consensus       196 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~--~~-  271 (396)
T PRK09147        196 DRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLL--YR-  271 (396)
T ss_pred             HHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHH--Hh-
Confidence            357999999999887632221  100 0   11111 123       57974 455 588999999998887653  11 


Q ss_pred             CCCCccchhhhcc-HHHH---HHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC
Q psy7882          70 LKTPAHKLKISDT-VRPH---VQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV  143 (329)
Q Consensus        70 ~~~~~hg~T~agn-lA~a---aala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~  143 (329)
                         ..+  +++.+ ++..   +++.. +.+.+ .+.+++.-+.+.+.|++.   ...  ..-.-|+++-+++..      
T Consensus       272 ---~~~--~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~--~~p~~g~f~~~~~~~------  335 (396)
T PRK09147        272 ---TYH--GCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---LDV--QLPDAGFYLWAKVPG------  335 (396)
T ss_pred             ---hhc--ccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh---cCC--CCCCeeEEEEEECCC------
Confidence               011  11222 2222   22222 23322 222333333333333321   111  112347777777631      


Q ss_pred             CCChHHHHHHHHHHH-HCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         144 PLNSRHMTHILDSCK-EHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       144 p~~~~~~~~~~~~l~-e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        +   ...+...++ ++||.+.++..          ..+.+|+.-  ..   +++++++.++..
T Consensus       336 --~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~--~~---~~~~l~~~l~rl  390 (396)
T PRK09147        336 --D---DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIAL--VA---PLAECVEAAERI  390 (396)
T ss_pred             --C---HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence              1   234666665 68999987421          135677753  22   367888888764

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=92.54  E-value=1.6  Score=44.79  Aligned_cols=177  Identities=10%  Similarity=-0.097  Sum_probs=86.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhc----CCccccceeeechhHHHhhhhhhhc-cCCCC-
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFK----GSFWDKLIVHTSTCTFENFIKIKYQ-ILKTP-   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLg----GG~~PigAv~~~~eI~d~~~~~~~~-~~~~~-   73 (329)
                      ..+|+++|+|+++. .+-+|.. ....+|+  |+     -|.++    +|..-+|++.++++..+.+.....+ ....+ 
T Consensus       235 ~~~gal~iVD~a~~-~~~~g~~-~~~~~Ga--D~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~  310 (481)
T PRK04366        235 HEAGGLLYYDGANL-NAILGKA-RPGDMGF--DVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYR  310 (481)
T ss_pred             HHcCCEEEEEecCh-hhhcccC-CccccCC--CEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCcee
Confidence            35799999999985 2233321 2233443  62     28775    2321246677787766554210000 00000 


Q ss_pred             ------cc---chhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882          74 ------AH---KLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV  136 (329)
Q Consensus        74 ------~h---g~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~  136 (329)
                            -|   .-.++++ +.+.++..- ..     +++ .++...+..+|.++|+++   +.....  +. .+..+-|.
T Consensus       311 l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---~~~~~~--~~-~~~~~~~~  384 (481)
T PRK04366        311 LDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---YDLPYD--RP-CMHEFVLS  384 (481)
T ss_pred             ecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---CcccCC--CC-eeEEEEEE
Confidence                  01   0112333 222222221 11     222 345566788888888876   332211  11 11111111


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeeccC---CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGG---LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G---~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...-. .  .......+.+.|.++|+......   ...+.++++|-...   |++|||++++++
T Consensus       385 ~~~~~-~--~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~---t~edid~l~~~l  442 (481)
T PRK04366        385 GKKLK-E--TGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETE---SKETLDAFIAAM  442 (481)
T ss_pred             Ccccc-c--cCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCC---CHHHHHHHHHHH
Confidence            10000 0  00124568899999999875221   12567888876644   689999999985

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=92.42  E-value=2.2  Score=42.70  Aligned_cols=165  Identities=11%  Similarity=0.034  Sum_probs=88.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcc--h-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR--F-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P--D-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~   73 (329)
                      .+||+.+|.|||..++-..|..+ .....+.|  |       ++|..+ -| +=+|-+++. +++.+.+..         
T Consensus       193 ~~~~i~ii~DEiY~~l~yd~~~~-~s~~~~~~~~~~~i~i~s~SK~~~mtG-wRvG~~v~~~~~l~~~~~~---------  261 (393)
T COG0436         193 REHDIIIISDEIYEELVYDGAEH-PSILELAGARDRTITINSFSKTYGMTG-WRIGWVVGPPEELIAALRK---------  261 (393)
T ss_pred             HHcCeEEEEehhhhhcccCCCCc-CCHhhcCCCcceEEEEecccccccccc-cceeEeecChHHHHHHHHH---------
Confidence            46899999999999997777411 11223444  4       578877 44 478989888 778776642         


Q ss_pred             ccchhh-hcc----HHHHHHHHh-h---HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCC
Q psy7882          74 AHKLKI-SDT----VRPHVQIKK-S---VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETK  142 (329)
Q Consensus        74 ~hg~T~-agn----lA~aaala~-~---ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~  142 (329)
                      .|..+. +.+    .|+.+++.. +   .++. .+..++.-+.+.+.|.++    +.+..+. -.|.|..+--.+..   
T Consensus       262 ~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~----~g~~~~~~p~Ga~Y~~~~i~~~---  334 (393)
T COG0436         262 LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI----GGLSVVKPPEGAFYLFPKIPEL---  334 (393)
T ss_pred             HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc----CCeeeccCCCeeEEEEeecCCC---
Confidence            122111 222    455555654 2   2222 122333333444444433    3233334 23555443322111   


Q ss_pred             CCCChHHHHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        .+   ...|+..|+ +.||.+.|...     ..+.+|++  |..   +.+++.+.++..
T Consensus       335 --~d---~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~---~~~~l~~a~~rl  385 (393)
T COG0436         335 --LD---SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LAT---SEETLEEALRRL  385 (393)
T ss_pred             --CC---HHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--Eec---CHHHHHHHHHHH
Confidence              11   234655555 56899988421     23578874  444   347777777763

>TIGR02006 IscS cysteine desulfurase IscS

Probab=92.32  E-value=2.2  Score=42.11  Aligned_cols=49  Identities=12%  Similarity=-0.071  Sum_probs=30.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH--HhhcCCccccceeeechhHHH
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ--KDFKGSFWDKLIVHTSTCTFE   60 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~--KaLgGG~~PigAv~~~~eI~d   60 (329)
                      ..+|+++|+|++|+ +|-.    .++..+..+|   ++  |.+ |. ..+|++.++++...
T Consensus       169 ~~~g~~livD~a~a-~g~~----~~~~~~~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~  222 (402)
T TIGR02006       169 RERKVFFHVDAAQS-VGKI----PINVNELKVDLMSISGHKIY-GP-KGIGALYVRRKPRV  222 (402)
T ss_pred             HHcCCEEEEEcchh-cCCc----ccCccccCCCEEEEehhhhc-CC-CceEEEEEccCCCC
Confidence            46799999999996 4322    2223345678   23  954 32 24788888876443

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=92.28  E-value=3.9  Score=40.57  Aligned_cols=173  Identities=9%  Similarity=-0.003  Sum_probs=81.4

Q ss_pred             cccceEEehhHhhchhccchh-hhhcccCCcch------HHHhh-cCCccccceeee------chhHHHhhhhhhhccCC
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDF-KGSFWDKLIVHT------STCTFENFIKIKYQILK   71 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaL-gGG~~PigAv~~------~~eI~d~~~~~~~~~~~   71 (329)
                      .+|+++|.||+...|-..|.. .....+.-..+      ++|.+ ..| +=+|.+++      .+++.+.+..  ...  
T Consensus       208 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~--~~~--  282 (412)
T PTZ00433        208 ELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKR--LGM--  282 (412)
T ss_pred             HcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHH--Hhh--
Confidence            579999999999877433321 11111110112      67998 566 47888886      2345554432  100  


Q ss_pred             CCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCC
Q psy7882          72 TPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        72 ~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~  146 (329)
                      ...+.++.+. .+++.++..   +.+++ .+++++.-+.+.+.|+    ++..+.-+.- -|+++-+.+....-.  .+ 
T Consensus       283 ~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~gg~f~~~~l~~~~~~--~~-  354 (412)
T PTZ00433        283 LVCGPCSVVQ-AALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIG----ECIGLSPTMPRGSMFLMSRLDLEKFR--DI-  354 (412)
T ss_pred             ccCCCChHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh----cCCCCcccCCCeeEEEEEEechhhcC--CC-
Confidence            0111122211 122233321   22222 2233333333333333    3322222222 256666666321000  00 


Q ss_pred             hHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .-...++..|. ++||++.++..  ..+.+|+.  +  .. .++++++.++..
T Consensus       355 -~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis--~--~~-~~e~l~~al~~l  402 (412)
T PTZ00433        355 -KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLT--I--SR-PVEVLREAVERI  402 (412)
T ss_pred             -CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEE--e--cC-CHHHHHHHHHHH
Confidence             01245777877 58999987532  24567764  2  21 367888888764

>PLN02242 methionine gamma-lyase

Probab=92.05  E-value=0.37  Score=48.61  Aligned_cols=130  Identities=12%  Similarity=-0.001  Sum_probs=70.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccc-h
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHK-L   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg-~   77 (329)
                      ..+|+++|.||+++.+ ..+.    ..+|  .|     ++|.++|+...+ |++++++++++.+..        ..++ .
T Consensus       190 ~~~gi~livDea~~~~-~~~~----~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~--------~~~~~~  254 (418)
T PLN02242        190 HEKGVTVVVDNTFAPM-VLSP----ARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMD--------LHHGAL  254 (418)
T ss_pred             HHhCCEEEEECCCCcc-CCCH----HHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHH--------Hhhhhh
Confidence            4579999999998644 2211    1223  46     569998765565 778888888777653        1111 1


Q ss_pred             hhhc-c-HHHHHHHH--h-hHHh-HHHHHHHHHHHHHHHHHHHH--HhCCce----------eeE---EeeceeeEEEee
Q psy7882          78 KISD-T-VRPHVQIK--K-SVLE-RFVHTYVVGNFLLTHLSKLR--EEFAIV----------GDV---RGKGLMIGVDLV  136 (329)
Q Consensus        78 T~ag-n-lA~aaala--~-~ile-~le~v~~lG~~L~~gL~eL~--~~~p~v----------~~V---RG~GLm~gIef~  136 (329)
                      .+.| . ....+++.  . +.+. ++++..+...++.+.|++.-  -.||..          ...   +|.|.|++|++.
T Consensus       255 ~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~  334 (418)
T PLN02242        255 MLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD  334 (418)
T ss_pred             hccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence            1112 1 11112111  1 2222 25566667777777776641  012210          112   388999999994


Q ss_pred             cCCCCCCCCChHHHHHHHHHHH
Q psy7882         137 QDKETKVPLNSRHMTHILDSCK  158 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~  158 (329)
                      .         .+.+.+|+..+.
T Consensus       335 ~---------~~~~~~f~~~l~  347 (418)
T PLN02242        335 T---------EERANRLMRYLQ  347 (418)
T ss_pred             C---------HHHHHHHHHHhh
Confidence            2         134556666654

>PRK07337 aminotransferase; Validated

Probab=92.03  E-value=3.2  Score=40.59  Aligned_cols=172  Identities=10%  Similarity=0.036  Sum_probs=86.9

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      .+++++|.||+..+|.-.+....  .....++      ++|.++ .|+ =+|.+++.+++.+.+......   ...+.++
T Consensus       194 ~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~vi~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~---~~~~~s~  267 (388)
T PRK07337        194 ARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDVITINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQN---LFICASA  267 (388)
T ss_pred             HCCCEEEEeccccccccCCCCcC--hhhccCCEEEEEechhhcCCchh-heeeeecCHHHHHHHHHHHHH---hccCCCh
Confidence            57899999999887754332111  1122344      579985 563 689999999888876531000   0111222


Q ss_pred             hhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          79 ISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        79 ~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      .+. .++++++..   +.+++ .+..++.-+++.+.|++    ++....+ -.-|+++-+++...... ...+   ...+
T Consensus       268 ~~q-~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~---~~~~  338 (388)
T PRK07337        268 LAQ-HAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVPVMPDGAFYVYADCRGVAHP-AAGD---SAAL  338 (388)
T ss_pred             HHH-HHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCeeEEEEEecccccCC-CCCC---HHHH
Confidence            221 223333432   12222 22333444444444443    3322112 23477787887421000 0011   2346


Q ss_pred             HHH-HHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDS-CKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~-l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ... +.++||.+.+...     ..+.+|+.    +.. +++++.+.++.+
T Consensus       339 ~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~----~~~-~~~~l~~~l~rl  383 (388)
T PRK07337        339 TQAMLHDAGVVLVPGRDFGPHAPRDYIRLS----YAT-SMSRLEEAVARL  383 (388)
T ss_pred             HHHHHHhCCEEEeCchhhCCCCCCCEEEEE----ecC-CHHHHHHHHHHH
Confidence            655 4578999977421     13567764    222 467888887764

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=91.80  E-value=5.6  Score=39.26  Aligned_cols=52  Identities=6%  Similarity=-0.199  Sum_probs=33.4

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcc--h-------HHHhhc-CCccccceeeechhHH
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICR--F-------VQKDFK-GSFWDKLIVHTSTCTF   59 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P--D-------i~KaLg-GG~~PigAv~~~~eI~   59 (329)
                      .||+++|.||+...|-..+... .....+.+  |       ++|.++ .| +-+|.+++++++.
T Consensus       204 ~~~~~iI~De~y~~~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~  265 (402)
T TIGR03542       204 EHGSLILFDAAYSAFISDPSLP-HSIFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELT  265 (402)
T ss_pred             HcCeEEEEEchhhhhccCCCCC-cchhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHh
Confidence            4699999999998774322110 00111111  2       579996 77 4899999988765

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK07049 methionine gamma-lyase; Validated

Probab=91.55  E-value=1.8  Score=43.80  Aligned_cols=50  Identities=8%  Similarity=-0.108  Sum_probs=32.4

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcC--CccccceeeechhHHHhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKG--SFWDKLIVHTSTCTFENFI   63 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgG--G~~PigAv~~~~eI~d~~~   63 (329)
                      +++++|+||+..++-...   .. .+|  .|     ++|.++|  |+ =+|.+++++++.+.+.
T Consensus       209 ~~~~vvvDety~~~~~~~---pl-~~g--~divv~S~SK~~gG~~gl-r~G~vv~~~~l~~~l~  265 (427)
T PRK07049        209 HRPIIACDNTLLGPVFQK---PL-EHG--ADLSVYSLTKYVGGHSDL-VAGAVLGRKALIRQVR  265 (427)
T ss_pred             CCCEEEEECCccccccCC---cc-ccC--CCEEEEcCceeecCCCCc-EEEEEECCHHHHHHHH
Confidence            689999999855432111   11 112  46     5699995  43 4688888888877665

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=91.22  E-value=1  Score=45.05  Aligned_cols=53  Identities=19%  Similarity=-0.068  Sum_probs=32.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~   63 (329)
                      ..+|+++|+||.+..+. .+     .....-.|     +.|.++|....+ |++++++++++.+.
T Consensus       176 ~~~gi~livD~t~a~~~-~~-----~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~  234 (398)
T PRK08249        176 KKVGALVVVDNTFATPI-NQ-----NPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVY  234 (398)
T ss_pred             HHcCCEEEEECCcCccc-cC-----CchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHH
Confidence            35799999999977331 11     11122356     359998632234 56667778777654

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=91.16  E-value=0.78  Score=45.79  Aligned_cols=114  Identities=14%  Similarity=0.070  Sum_probs=59.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccc-eeeechhHHHh-hhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKL-IVHTSTCTFEN-FIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pig-Av~~~~eI~d~-~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||++.-+ -....     ...-.|     +.|.++|.-..+| +++++++.... +..  ..    ..+|.
T Consensus       177 ~~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~--~~----~~~g~  244 (398)
T PRK07504        177 NQAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD--YF----RHTGP  244 (398)
T ss_pred             HHcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH--HH----HHhCC
Confidence            4579999999998622 11111     112246     3599987324674 56666665432 221  00    01121


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee------------------eEEeeceeeEEEee
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG------------------DVRGKGLMIGVDLV  136 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~------------------~VRG~GLm~gIef~  136 (329)
                        ..+ ..++.++.. +.+.. +++..+....+.+.|++    ||.|.                  ..+|.|.|+.|++.
T Consensus       245 --~~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~----~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~  318 (398)
T PRK07504        245 --SLSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAG----HPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK  318 (398)
T ss_pred             --CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHc----CCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence              122 344444444 33332 55555656666555543    33322                  24577899999995

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=90.93  E-value=3.6  Score=40.45  Aligned_cols=171  Identities=16%  Similarity=0.100  Sum_probs=88.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccc-cceeeechhHHHhhhhhhhc-c-CCCC---
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWD-KLIVHTSTCTFENFIKIKYQ-I-LKTP---   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~-~-~~~~---   73 (329)
                      .++|+++|+|=||+ +|-  .-.-.+.    -|+     -|.+++ . | ++.+..+++.++.+.+...+ . .+.+   
T Consensus       152 ~~~g~~~iVDavqs-~g~--~~idv~~----~D~~~~s~~K~lg~-~-~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~  222 (361)
T TIGR01366       152 GSDDALVVIDATSG-AGG--LPVDIAE----TDVYYFAPQKNFAS-D-GGLWLAIMSPAALERIEAIAASGRWVPEFLSL  222 (361)
T ss_pred             ccCCCeEEEEcCcc-ccC--CCCCHHH----CCEEEEEchhhcCC-C-CceEEEEECHHHHhhhhcccCCCCCCchhhhH
Confidence            35799999999998 321  1111221    362     298763 2 3 34555688877654420000 0 0000   


Q ss_pred             -------ccchhhhc-cH----HHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEE
Q psy7882          74 -------AHKLKISD-TV----RPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVD  134 (329)
Q Consensus        74 -------~hg~T~ag-nl----A~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIe  134 (329)
                             ..+.|++. ++    ++.++++-  +.  ++. .++.+++.++++++|+++..-.+.+..  .+ ......+.
T Consensus       223 ~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~-s~~v~~v~  301 (361)
T TIGR01366       223 PTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR-SQVVGTID  301 (361)
T ss_pred             HHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc-ccceEEEE
Confidence                   00122222 23    33444432  11  222 466777777787777776311111111  11 12234455


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |. +.     ++   ...+...+.++||.+.+..  ..++++|+..-...   |.+||+.+++++
T Consensus       302 ~~-~g-----~~---~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~---t~~di~~l~~al  354 (361)
T TIGR01366       302 FV-DD-----ID---AATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAI---DPDDVEALTECV  354 (361)
T ss_pred             CC-Cc-----cC---HHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCC---CHHHHHHHHHHH
Confidence            53 21     11   3447777888999885421  12468999876554   689999999986

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=90.82  E-value=0.8  Score=45.87  Aligned_cols=114  Identities=18%  Similarity=0.043  Sum_probs=59.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHH-hhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFE-NFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d-~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||++.-. -...  .. .+|  .|     ..|.++|.-..+ |+++++++... .+..  ..    ..+|.
T Consensus       182 ~~~g~~vivD~a~a~~-~~~~--~~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~--~~----~~~g~  249 (403)
T PRK07810        182 HAAGAKVVLDNVFATP-LLQR--GL-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK--LM----RHTGP  249 (403)
T ss_pred             HHcCCEEEEECCCCcc-ccCC--hh-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH--HH----HHhCC
Confidence            3579999999997511 1111  11 223  47     349998622245 66777776543 2221  00    01121


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE------------------eeceeeEEEee
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR------------------GKGLMIGVDLV  136 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR------------------G~GLm~gIef~  136 (329)
                      +  .+ ..++.++.. +.+.. +++-.+....+.+.|    +.||.|..|.                  |.|.|+.+++.
T Consensus       250 ~--~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L----~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~  323 (403)
T PRK07810        250 A--LSAFNAWVLLKGLETLALRVRHSNASALRIAEFL----EGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD  323 (403)
T ss_pred             C--CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH----hcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence            1  12 333334443 33322 444445444444433    4567666665                  88999999995

>PLN02452 phosphoserine transaminase

Probab=89.99  E-value=1.9  Score=42.82  Aligned_cols=168  Identities=12%  Similarity=0.008  Sum_probs=90.8

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcchH---HHhhcCCccc-cceeeechhHHHhhhhhhhccCCC---Cccchhh-
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---QKDFKGSFWD-KLIVHTSTCTFENFIKIKYQILKT---PAHKLKI-   79 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~KaLgGG~~P-igAv~~~~eI~d~~~~~~~~~~~~---~~hg~T~-   79 (329)
                      ++++|+|=|++=.++   -.-.+.+|+  |+   -|.+  | .| ++++.+|+++.+............   ..+.++| 
T Consensus       170 ~~~lvVDa~Ss~g~~---pidv~~~~v--~~~saqK~l--G-P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~  241 (365)
T PLN02452        170 NVPLVADMSSNFLSK---PVDVSKYGV--IYAGAQKNV--G-PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYN  241 (365)
T ss_pred             CCeEEEECCccccCc---ccCHHHcCE--EEEeccccc--C-CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccC
Confidence            579999999884433   344566776  63   2988  3 35 899999999886543200000000   0122333 


Q ss_pred             hccHHHHHHHH-h-hHHh------H-HHHHHHHHHHHHHHHHHHHHhCCc-ee-eEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          80 SDTVRPHVQIK-K-SVLE------R-FVHTYVVGNFLLTHLSKLREEFAI-VG-DVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        80 agnlA~aaala-~-~ile------~-le~v~~lG~~L~~gL~eL~~~~p~-v~-~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +-++....++. . +.++      . .++-+++.++|.++|++...=+.. +. +.|. ...+.+.+..         .+
T Consensus       242 TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs-~~~vsF~~~~---------~~  311 (365)
T PLN02452        242 TPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRS-LMNVPFTLGG---------SE  311 (365)
T ss_pred             ChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhC-CeEEEEEcCC---------ch
Confidence            22332222222 2 3332      2 455666667777777653110111 11 1232 2334444321         13


Q ss_pred             HHHHHHHHHHHCCceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+|.+.+.++|++..+.- ..+. +|+.   +..+.+.++++.+++..
T Consensus       312 ~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s---~yna~~~~~v~~L~~~m  357 (365)
T PLN02452        312 LEAEFVKEAAKAGMVQLKGHRSVGG-MRAS---IYNAMPLAGVEKLVAFM  357 (365)
T ss_pred             hHHHHHHHHHHCCCcccCCccccCc-eEEE---CcCCCCHHHHHHHHHHH
Confidence            56789999999999886531 1233 6664   45556789999999874

>PTZ00376 aspartate aminotransferase; Provisional

Probab=89.43  E-value=2.7  Score=41.65  Aligned_cols=57  Identities=5%  Similarity=-0.120  Sum_probs=33.9

Q ss_pred             ccccceEEehhHhhchhccch---hhhhcccCCcch-------HHHhhc-CCcccccee---eechhHHHhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCLQICRF-------VQKDFK-GSFWDKLIV---HTSTCTFENF   62 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~GV~PD-------i~KaLg-GG~~PigAv---~~~~eI~d~~   62 (329)
                      .+||+++|.||+...|-.-+.   .-+...+.-.+|       ++|.++ .|+ =+|.+   .+++++.+.+
T Consensus       206 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l  276 (404)
T PTZ00376        206 KRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANV  276 (404)
T ss_pred             HhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHH
Confidence            357999999999987743221   101111111122       679999 784 78887   5677655433

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=88.64  E-value=3.9  Score=40.74  Aligned_cols=51  Identities=12%  Similarity=-0.056  Sum_probs=28.7

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeee-chhHHHhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHT-STCTFENF   62 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~-~~eI~d~~   62 (329)
                      .+|+++|+||++.....      +.....-.|     +.|.++|.- .-.|++++ ++++.+.+
T Consensus       165 ~~g~~vivDeay~~~~~------~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l  222 (386)
T PRK08045        165 EAGAVSVVDNTFLSPAL------QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTEL  222 (386)
T ss_pred             HcCCEEEEECCCCcccc------CCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHH
Confidence            46999999999764311      111222337     349987531 12466655 45555544

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=88.62  E-value=11  Score=37.03  Aligned_cols=173  Identities=6%  Similarity=-0.038  Sum_probs=84.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch--------HHHh-hcCCccccceeeech------hHHHhhhhhhhcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF--------VQKD-FKGSFWDKLIVHTST------CTFENFIKIKYQI   69 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD--------i~Ka-LgGG~~PigAv~~~~------eI~d~~~~~~~~~   69 (329)
                      ..+|+++|.||+...|-..|.-+. ......|+        ++|. ...| +=+|.+++..      ++.+.+..  .. 
T Consensus       198 ~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~--~~-  272 (401)
T TIGR01264       198 ERQCLPIIADEIYGDMVFSGATFE-PLASLSSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVK--LS-  272 (401)
T ss_pred             HHCCCEEEEEhhhhhhccCCcccc-cHHHcCCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHH--Hh-
Confidence            357999999999998854442111 01112232        5797 5555 4788888763      23333321  00 


Q ss_pred             CCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCC
Q psy7882          70 LKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        70 ~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p  144 (329)
                       ....+.++.+. .++++++..   +.+++ .+..++.-+++.+.|++    ++.+..+ -.-|+++-+.+....-. ..
T Consensus       273 -~~~~~~~~~~q-~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~~p~~g~f~~~~~~~~~~~-~~  345 (401)
T TIGR01264       273 -QRILGPCTIVQ-GALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA----VPGLRPVMPSGAMYMMVGIEMEHFP-EF  345 (401)
T ss_pred             -hccCCCCcHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCCCeeeEEEEEecccccC-CC
Confidence             00111122111 223333332   23332 33344444444444443    3322212 23477777776421000 00


Q ss_pred             CChHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+   ...+...++ ++||++.++..  ..+.+|+.  +..   .++++++.++.+
T Consensus       346 ~~---~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis--~~~---~~~~l~~~l~rl  393 (401)
T TIGR01264       346 KN---DVEFTERLVAEQSVFCLPGSCFEYPGFFRVV--LTV---PVVMMEEACSRI  393 (401)
T ss_pred             CC---HHHHHHHHHHhCCEEEeCchhcCCCCeEEEE--EcC---CHHHHHHHHHHH
Confidence            01   234666765 78999987532  24667764  222   467888888764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK09265 aminotransferase AlaT; Validated

Probab=88.47  E-value=12  Score=37.03  Aligned_cols=180  Identities=8%  Similarity=-0.046  Sum_probs=81.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch--------HHHhh-cCCccccceeee--chhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF--------VQKDF-KGSFWDKLIVHT--STCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD--------i~KaL-gGG~~PigAv~~--~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|+++|.||+...|-..+..+ .......++        ++|.+ ..| +-+|.+++  .+++.+.+...........
T Consensus       198 ~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~  275 (404)
T PRK09265        198 RQHNLIIFADEIYDKILYDGAVH-ISIASLAPDLLCVTFNGLSKAYRVAG-FRVGWMVLSGPKKHAKGYIEGLDMLASMR  275 (404)
T ss_pred             HHCCCEEEEehhhhhccCCCCCc-CCHHHcCCCceEEEEecchhhccCcc-cceEEEEEeCchHHHHHHHHHHHHHhccc
Confidence            35789999999998773323110 000112233        57999 456 47888875  3433222211000000000


Q ss_pred             ccchhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHH
Q psy7882          74 AHKLKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        74 ~hg~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .+.++.+. .++.+++.. +.+++ +...+.+-+. ++.+.+..+.++.+.-+. .-|+++-+.+.....   +. ..-.
T Consensus       276 ~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~-r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~---~~-~~~~  349 (404)
T PRK09265        276 LCANVPAQ-HAIQTALGGYQSINELILPGGRLYEQ-RDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVY---PI-HDDE  349 (404)
T ss_pred             cCCCcHHH-HHHHHHhcCchhHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcccCCCcceEEEEEeccccc---CC-CCHH
Confidence            11111111 233334432 22221 1111112111 223333333343322122 236666666642110   00 0112


Q ss_pred             HHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...+.++||++.++..    .++.+|+.=  ..   +++++++.++..
T Consensus       350 ~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~---~~e~l~~~l~rl  395 (404)
T PRK09265        350 QFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LP---RVDDLEEAIGRI  395 (404)
T ss_pred             HHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence            3466788899999987521    245677752  22   578888888874

>PRK06107 aspartate aminotransferase; Provisional

Probab=88.44  E-value=6.9  Score=38.64  Aligned_cols=176  Identities=8%  Similarity=-0.035  Sum_probs=84.4

Q ss_pred             cceEEehhHhhchhccchhhh-hccc--CCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLG-FQCL--QICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA-~e~~--GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ++++|.||+...+...+..+. ....  +....      ++|.++ .|+ =+|.+++.+++.+.+..  ... ....+.+
T Consensus       200 ~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~--~~~-~~~~~~s  275 (402)
T PRK06107        200 HVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW-RIGYAAGPADLIAAINK--LQS-QSSSCPS  275 (402)
T ss_pred             CeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc-ceeeeecCHHHHHHHHH--HHH-hcccCCC
Confidence            899999999976533332111 1111  11111      579997 774 78989999999887764  110 0011222


Q ss_pred             hhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh--HHHH
Q psy7882          78 KISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS--RHMT  151 (329)
Q Consensus        78 T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~--~~~~  151 (329)
                      +++. .+++.++..  ..+++ .+..++.-+.+.+.|++    ++.+.-.... |+.+-+.+..-.....|...  ....
T Consensus       276 ~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~  350 (402)
T PRK06107        276 SISQ-AAAAAALNGDQSFVTESVAVYKQRRDYALALLNA----IPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQ  350 (402)
T ss_pred             hHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc----CCCCcccCCCcceEEeeecccccccccccccCCCCHH
Confidence            2211 233334432  23332 23334443444444433    3322212222 55555555210000000000  0123


Q ss_pred             HHHH-HHHHCCceeeccCCC--CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILD-SCKEHGLLLGRGGLS--GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~-~l~e~GVLl~~~G~~--~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++. .+.++||.+.+....  .+.+|+.=  ..   +++++++.++..
T Consensus       351 ~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~--~~---~~e~l~~~l~~l  394 (402)
T PRK06107        351 DVVLYLLDSAGVAVVQGTAYGLSPYFRLSI--AT---SLETLEEACARI  394 (402)
T ss_pred             HHHHHHHHhCCEEEeCccccCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence            4554 445789999885321  35677642  22   578999888864

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=88.20  E-value=8.6  Score=38.19  Aligned_cols=174  Identities=11%  Similarity=-0.032  Sum_probs=80.9

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCCcch------HHHh-hcCCccccceeeec--hhHH------Hhhhhhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF------VQKD-FKGSFWDKLIVHTS--TCTF------ENFIKIKYQ   68 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD------i~Ka-LgGG~~PigAv~~~--~eI~------d~~~~~~~~   68 (329)
                      ..|++++|.||+...|-..|..+ ....+.-.+.      ++|. ...| +-+|.+++.  +.+.      +.+..  ..
T Consensus       200 ~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~--~~  276 (409)
T PLN00143        200 RKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKK--AL  276 (409)
T ss_pred             HHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHH--HH
Confidence            35799999999998874433211 1111211111      6799 5666 489988873  2332      22221  00


Q ss_pred             cCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-E-eeceeeEEEeecCCCCC
Q psy7882          69 ILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-R-GKGLMIGVDLVQDKETK  142 (329)
Q Consensus        69 ~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-R-G~GLm~gIef~~d~~~~  142 (329)
                        .....+++.+. .+.++++..   +.+++ .+.+++.-+++.+.|+    +.+..... + .-|+++-+.+.....  
T Consensus       277 --~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~~~~~~~p~gg~f~w~~l~~~~~--  347 (409)
T PLN00143        277 --NPAPFPPTFIQ-AAIPEILEKTTEDFFSKTINILRAALAFCYDKLK----EIPCIMCPQKAEGAFFALVKLNLLLL--  347 (409)
T ss_pred             --hccCCCCchHH-HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh----cCCCCCCCCCCCeeEEEEEecchhhc--
Confidence              00011111111 223333331   23332 2223332233333333    23322111 1 236777777742100  


Q ss_pred             CCCChHHHHHH-HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHI-LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~-~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+  .....+ ...+.++||++.++..  ..+.+|+.  +..   +++++++.++..
T Consensus       348 ~~~--~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~--~~~---~~~~l~~al~rl  398 (409)
T PLN00143        348 EDI--EDDMEFCLKLAKEESLIILPGVTVGLKNWLRIT--FAV---EQSSLEDGLGRL  398 (409)
T ss_pred             CCC--CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE--EcC---CHHHHHHHHHHH
Confidence            000  012234 4555789999988531  24677775  222   478888888764

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=88.11  E-value=7.2  Score=39.44  Aligned_cols=135  Identities=16%  Similarity=0.090  Sum_probs=71.2

Q ss_pred             HHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh---cc-HHHHHHHHh-h-HHhH--HHHHHHHHHHHHHH
Q psy7882          39 QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS---DT-VRPHVQIKK-S-VLER--FVHTYVVGNFLLTH  110 (329)
Q Consensus        39 ~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a---gn-lA~aaala~-~-ile~--le~v~~lG~~L~~g  110 (329)
                      +|.---|- -++++.++++-++.+..+        ....|.+   -| +.-+..+.. + -++.  -.|.+-+...|..-
T Consensus       253 SKITf~Ga-Gva~~aaS~~Nl~~~~~~--------~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V  323 (425)
T PF12897_consen  253 SKITFPGA-GVAFFAASEANLAWIKKH--------LSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAV  323 (425)
T ss_dssp             TTTS-TTS-S-EEEEE-HHHHHHHHHH--------HHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCc-ceeeeecCHHHHHHHHHH--------hcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHH
Confidence            35544442 578888888777665531        0011111   12 343444444 3 2322  34556666666655


Q ss_pred             HHHHHHhCC----ce-eeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--------CCCCEEEEe
Q psy7882         111 LSKLREEFA----IV-GDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--------LSGNTLTAL  177 (329)
Q Consensus       111 L~eL~~~~p----~v-~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~  177 (329)
                      ++.|.++.+    +. +..--=|.++.++..+          ..+.++++.|.+.||.+.++|        +...-||++
T Consensus       324 ~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~----------G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiA  393 (425)
T PF12897_consen  324 LEILEEELGDGLGIASWTKPKGGYFISLDVLD----------GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIA  393 (425)
T ss_dssp             HHHHHHHHGTGGTSEEE---SBSS-EEEEEST----------T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE-
T ss_pred             HHHHHHhcCCCCCeeEecCCCCceEEEEecCC----------ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEec
Confidence            555544433    21 2222337777777653          357889999999999999876        356789999


Q ss_pred             CccccCcCCHHHHHHHHhc
Q psy7882         178 QPKLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       178 PPL~It~~t~eeId~~l~~  196 (329)
                      |.+-.    .+|++..+++
T Consensus       394 PS~P~----leel~~Am~~  408 (425)
T PF12897_consen  394 PSYPS----LEELETAMDV  408 (425)
T ss_dssp             -SSS-----HHHHHHHHHH
T ss_pred             CCCCC----HHHHHHHHHH
Confidence            98764    6899998885

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=87.99  E-value=4.9  Score=40.32  Aligned_cols=53  Identities=11%  Similarity=-0.056  Sum_probs=29.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCC-ccccceeee-chhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGS-FWDKLIVHT-STCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG-~~PigAv~~-~~eI~d~~~   63 (329)
                      ..+|+++|.||++..-...      .-...-.|+     .|.++|. -.-.|++++ ++++.+.+.
T Consensus       172 ~~~gi~vIvD~a~a~~~~~------~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~  231 (405)
T PRK08776        172 HKVGALTVVDNTFLSPALQ------KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLV  231 (405)
T ss_pred             HHcCCEEEEECCCcccccC------CcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHH
Confidence            3579999999998632111      111123473     3999763 123466655 456666553

>PRK06855 aminotransferase; Validated

Probab=87.63  E-value=8.7  Score=38.57  Aligned_cols=48  Identities=8%  Similarity=-0.087  Sum_probs=30.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch--------HHHhhc-CCccccceeee
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF--------VQKDFK-GSFWDKLIVHT   54 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD--------i~KaLg-GG~~PigAv~~   54 (329)
                      .+||+++|.||+...+-..|.-+. ....+.||        ++|.++ .|+ =+|.+++
T Consensus       201 ~~~~~~II~De~Y~~l~~~~~~~~-sl~~~~~~~~~I~~~S~SK~~~~pGl-RiG~ii~  257 (433)
T PRK06855        201 REYDLFIICDEIYNNIVYNGKKTV-PLSEVIGDVPGIALKGISKELPWPGS-RCGWIEV  257 (433)
T ss_pred             HHcCCEEEEeccccccccCCCCCC-CHHHHcCcCCeEEEecCccccCCCcc-eEEEEEE
Confidence            457999999999988843342110 00112233        679996 774 7888886

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=87.55  E-value=3.1  Score=41.35  Aligned_cols=52  Identities=17%  Similarity=-0.107  Sum_probs=29.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCC-ccccceeeec-hhHHHhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGS-FWDKLIVHTS-TCTFENF   62 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG-~~PigAv~~~-~eI~d~~   62 (329)
                      ..+|+++|+||++... -.+.     ..+.-.|     +.|.++|. -.-.|+++++ +++.+.+
T Consensus       173 ~~~gi~lIvD~a~a~~-~~~~-----p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~  231 (388)
T PRK07811        173 HDAGAKVVVDNTFASP-YLQQ-----PLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAF  231 (388)
T ss_pred             HHcCCEEEEECCCCcc-ccCC-----chhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHH
Confidence            3579999999987532 1111     1222356     45999862 1124666664 5555543

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=87.36  E-value=8.3  Score=39.70  Aligned_cols=40  Identities=15%  Similarity=0.048  Sum_probs=27.2

Q ss_pred             HHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +...|.++||++.++..    ..+.+|+.  +..   +++++.+.++..
T Consensus       465 ~~~ll~~~gV~v~pg~~F~~~~~~~~Ris--~~~---~~~~l~~a~~rl  508 (517)
T PRK13355        465 ALDLLHDKKVLIVQGTGFNWDKPDHFRVV--YLP---RLEDLEDAMDRL  508 (517)
T ss_pred             HHHHHHhCCEEEeCcchhCCCCcCEEEEE--eCC---CHHHHHHHHHHH
Confidence            45667789999987521    24678875  332   578888888764

>PLN02724 Molybdenum cofactor sulfurase

Probab=86.82  E-value=19  Score=39.52  Aligned_cols=172  Identities=13%  Similarity=0.026  Sum_probs=87.5

Q ss_pred             ceEEehhHhhchhccchhhhhcccCCcchH---H--HhhcCCccccceeeechhHHHhhhhhhhccCC------------
Q psy7882           9 CGVVVSAVDFGSGDNGTYLGFQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFIKIKYQILK------------   71 (329)
Q Consensus         9 iLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~------------   71 (329)
                      +++++|=+|+ .|..    ....-.+.+|+   +  |-++ |=.-+|++.++++..+.+.+...+...            
T Consensus       231 ~~v~vDaaQ~-~g~~----piDv~~~~~Dfl~~S~HK~~G-gP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~  304 (805)
T PLN02724        231 WMVLLDAAKG-CGTS----PPDLSRYPADFVVVSFYKIFG-YPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK  304 (805)
T ss_pred             eEEEeehhhh-cCCC----CCChhhcCCCEEEEecceecc-CCCCceEEEEehhhhhhhcCCccCCCceEEEecccceee
Confidence            5788888776 3321    22222345782   2  9654 311269999999887655431001000            


Q ss_pred             ------CCccchhhhcc--HHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhC--CceeeE----------E
Q psy7882          72 ------TPAHKLKISDT--VRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEF--AIVGDV----------R  125 (329)
Q Consensus        72 ------~~~hg~T~agn--lA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~--p~v~~V----------R  125 (329)
                            ...-.+|.+-.  +++.++++  .+++      .++...+.++|.++|.++....  |.+ .+          .
T Consensus       305 ~~~~~~~rfE~GT~n~~~i~~l~aal~--~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~~~~~  381 (805)
T PLN02724        305 RRERVEQRFEDGTISFLSIAALRHGFK--LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFKLEFH  381 (805)
T ss_pred             ccccHHHHhcCCCcchhHHHHHHHHHH--HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCCCCcc
Confidence                  00011222211  34444443  3322      4577888888888888763111  111 11          1


Q ss_pred             eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC------------------------------------
Q psy7882         126 GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL------------------------------------  169 (329)
Q Consensus       126 G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~------------------------------------  169 (329)
                      .+|.++++.+....+.  ...   ...+...+-++||.++..-+                                    
T Consensus       382 ~r~~ivsFnv~~~~~~--~v~---~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~  456 (805)
T PLN02724        382 IQGPIVTFNLKRADGS--WVG---HREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHG  456 (805)
T ss_pred             cccCEEEEEEEcCCCC--EeC---HHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecC
Confidence            2566777777532211  011   11233333455666653110                                    


Q ss_pred             -CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         170 -SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       170 -~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...++|+..-+..   |.+|||.+++++
T Consensus       457 ~~~G~vRvS~g~yn---t~eDvd~lv~~l  482 (805)
T PLN02724        457 RPTGAVRVSFGYMS---TFEDCQKFIDFI  482 (805)
T ss_pred             cccceEEEEcCccC---CHHHHHHHHHHH
Confidence             1267888877765   689999999974

>PRK14012 cysteine desulfurase; Provisional

Probab=86.69  E-value=3.3  Score=40.84  Aligned_cols=48  Identities=10%  Similarity=-0.121  Sum_probs=29.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHH
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTF   59 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~   59 (329)
                      .++|+++|.|++|+ +|..    ........+|     ..|.++.+  .+|+++++++..
T Consensus       171 ~~~g~~vivD~a~~-~g~~----~~~~~~~~~D~~~~s~~K~~gp~--g~G~l~~~~~~~  223 (404)
T PRK14012        171 RERGIIFHVDAAQS-VGKV----PIDLSKLKVDLMSFSAHKIYGPK--GIGALYVRRKPR  223 (404)
T ss_pred             HHcCCEEEEEcchh-cCCc----ccCcccCCCCEEEEehhhccCCC--ceEEEEEecCCC
Confidence            35799999999997 3322    1111123478     23966432  578888887643

>PLN02187 rooty/superroot1

Probab=86.15  E-value=15  Score=37.38  Aligned_cols=178  Identities=10%  Similarity=0.017  Sum_probs=82.1

Q ss_pred             ccccceEEehhHhhchhccchhh-hhccc-CCcc----h-HHHh-hcCCccccceeeec--hhHH---HhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCL-QICR----F-VQKD-FKGSFWDKLIVHTS--TCTF---ENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~-GV~P----D-i~Ka-LgGG~~PigAv~~~--~eI~---d~~~~~~~~~~~   71 (329)
                      ..||+++|.||+...+-..|..+ ....+ ...|    . ++|. ...| +-+|.+++.  +.++   +.+....... .
T Consensus       234 ~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG-lRiG~~v~~~p~~~~~~~~~~~~~~~~~-~  311 (462)
T PLN02187        234 RKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG-WKIGWIALNDPEGVFETTKVLQSIKQNL-D  311 (462)
T ss_pred             HHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcc-ceeEEEEecCchhHHHHHHHHHHHHHhc-c
Confidence            35799999999998853333211 11111 1111    1 6799 6666 489988873  2222   2222100000 0


Q ss_pred             CCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-Ee-eceeeEEEeecCCCCCCCC
Q psy7882          72 TPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RG-KGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        72 ~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG-~GLm~gIef~~d~~~~~p~  145 (329)
                      ....+++++. .+++++++.   +.+++ .+.+++.-+.+.+.|++    ++.+..+ .. -|.++-+.+.....  ..+
T Consensus       312 ~~~~~s~~~Q-~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~----~~~~~~~~~P~gg~fl~~~l~~~~~--~~~  384 (462)
T PLN02187        312 VTPDPATIIQ-AALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD----IPCVVCPKKPESCTYLLTKLELSLM--DNI  384 (462)
T ss_pred             ccCCCCHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh----CCCCcCCCCCCEeEEEEeecChhhC--CCC
Confidence            0001122222 333444432   23332 23333333444444443    3432211 22 24555555531100  001


Q ss_pred             ChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . .-...+...+.++||++.|+..  ..+.+||.  +..   .++.+++.++.+
T Consensus       385 ~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis--~~~---~~e~l~~al~rL  432 (462)
T PLN02187        385 K-DDIDFCVKLAREENLVFLPGDALGLKNWMRIT--IGV---EAHMLEDALERL  432 (462)
T ss_pred             C-CHHHHHHHHHhhCCEEEECccccCCCCeEEEE--eCC---CHHHHHHHHHHH
Confidence            0 0112234556789999987521  24678875  222   467888888864

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=85.14  E-value=8.2  Score=38.32  Aligned_cols=52  Identities=15%  Similarity=-0.034  Sum_probs=28.7

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeee-chhHHHhhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHT-STCTFENFI   63 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~-~~eI~d~~~   63 (329)
                      .+|+++|+||++..+-..      .....-.|     +.|.++|.- +-.|++.+ .+++.+.+.
T Consensus       164 ~~g~~vvvD~a~~~~~~~------~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~  222 (382)
T TIGR02080       164 AVGAVVVVDNTFLSPALQ------NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELA  222 (382)
T ss_pred             HcCCEEEEECCCcccccC------CchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHH
Confidence            579999999998522111      11112246     459887631 12465555 456655443

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=84.77  E-value=3.3  Score=40.89  Aligned_cols=114  Identities=14%  Similarity=0.111  Sum_probs=59.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeee-chhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHT-STCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~-~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||.+.    ++..  +...+.-.|     ..|.++|.---+ |++++ ++++++.+..  ..    ..+|.
T Consensus       163 ~~~gi~vvvD~t~~----~~~~--~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~--~~----~~~G~  230 (364)
T PRK07269        163 HAKGAKVIVDNTFY----SPIY--QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY--NL----NTTGA  230 (364)
T ss_pred             HHcCCEEEEECCCc----cccc--CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH--HH----HHhCC
Confidence            35799999999842    1111  233344567     349998621123 55565 4566655432  10    01121


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEEee
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVDLV  136 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIef~  136 (329)
                        ..+ +.+..++.. +-++. +++..+....+.+    ..+.||.+..|.  |.|.|++|++.
T Consensus       231 --~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~----~L~~~p~v~~v~ypg~gg~~sf~~~  288 (364)
T PRK07269        231 --VLSPFDSYLLMRGLKTLSLRMERSTANAQEVVA----FLKKSPAVKEVLYTGKGGMISFKVA  288 (364)
T ss_pred             --CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH----HHHhCCCccEEeCCCcCcEEEEEEC
Confidence              122 444333333 33332 4444444444444    345688776665  78999999984

>PLN02656 tyrosine transaminase

Probab=84.60  E-value=15  Score=36.50  Aligned_cols=175  Identities=10%  Similarity=0.004  Sum_probs=84.5

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccC-----Ccch-HHHh-hcCCccccceeeec--------hhHHHhhhhhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQ-----ICRF-VQKD-FKGSFWDKLIVHTS--------TCTFENFIKIKYQ   68 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~G-----V~PD-i~Ka-LgGG~~PigAv~~~--------~eI~d~~~~~~~~   68 (329)
                      ..||+++|.||+...|-..|.-+ ....++     |.=. ++|. ...| +=+|.+++.        +++.+.+..  ..
T Consensus       199 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~--~~  275 (409)
T PLN02656        199 EKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKK--YF  275 (409)
T ss_pred             HHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHH--HH
Confidence            45799999999998874333211 111111     1111 6798 6666 478988873        466665542  10


Q ss_pred             cCCCCccchhhhccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEee-ceeeEEEeecCCCCC
Q psy7882          69 ILKTPAHKLKISDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGK-GLMIGVDLVQDKETK  142 (329)
Q Consensus        69 ~~~~~~hg~T~agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~-GLm~gIef~~d~~~~  142 (329)
                      .  ...+.++++. .+++++++.   +.+++ .+..++.-+.+.+.|+    +++... .++.. |+++-+.+...... 
T Consensus       276 ~--~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~----~~~~~~~~~~p~gg~~~w~~l~~~~~~-  347 (409)
T PLN02656        276 D--ILGGPATFIQ-AAVPTILEQTDESFFKKTINILKQSSDICCDRIK----EIPCITCPHKPEGSMAVMVKLNLSLLE-  347 (409)
T ss_pred             h--hhcCCCHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh----hCCCCcCCcCCCeEEEEEEecchhhcC-
Confidence            0  0111222211 333444442   23332 2233333333333333    333322 12333 56666666321000 


Q ss_pred             CCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .+. .-...+...+.++||++.|...  ..+.+|+.=  ..   +++++.+.++..
T Consensus       348 -~~~-~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~--~~---~~e~l~eal~rl  397 (409)
T PLN02656        348 -DIS-DDIDFCFKLAREESVIILPGTAVGLKNWLRITF--AA---DPSSLEEALGRI  397 (409)
T ss_pred             -CCC-CHHHHHHHHHHhCCEEEecchhcCCCCeEEEEe--CC---CHHHHHHHHHHH
Confidence             000 1112345677889999988521  245677642  22   478888888764

>PRK07050 cystathionine beta-lyase; Provisional

Probab=84.39  E-value=2.4  Score=42.33  Aligned_cols=53  Identities=9%  Similarity=-0.189  Sum_probs=31.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeee-chhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHT-STCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~-~~eI~d~~~   63 (329)
                      ..+|+++|+||.+.-    |..+.-...|  .|     +.|.++||. .+.|++++ ++++++.+.
T Consensus       177 ~~~gi~livD~a~a~----~~~~~~l~~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~  236 (394)
T PRK07050        177 RARGVVTAIDNTYSA----GLAFKPFEHG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLK  236 (394)
T ss_pred             HHcCCEEEEECCccc----ccccCHHHcC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHH
Confidence            357999999999752    2111111224  26     469998663 35676776 566666543

>KOG1368|consensus

Probab=84.14  E-value=12  Score=36.69  Aligned_cols=136  Identities=12%  Similarity=0.058  Sum_probs=71.4

Q ss_pred             HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchhhhcc-HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHH
Q psy7882          38 VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLKISDT-VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSK  113 (329)
Q Consensus        38 i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn-lA~aaala~--~ile~le~v~~lG~~L~~gL~e  113 (329)
                      ++|+||.   |+ |+++++.+..+....  ..    -..|+.+-.. +-|++++-.  +.+..+.+..+....|.++++.
T Consensus       223 LSKglgA---PVGSViVG~k~FI~kA~~--~R----KalGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~  293 (384)
T KOG1368|consen  223 LSKGLGA---PVGSVIVGSKDFIDKARH--FR----KALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEYINT  293 (384)
T ss_pred             hhccCCC---CcccEEEccHHHHHHHHH--HH----HHhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcc
Confidence            5799974   99 567777766554321  00    0223333333 334444433  2221144555666666666653


Q ss_pred             HHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHH
Q psy7882         114 LREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTP  192 (329)
Q Consensus       114 L~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~  192 (329)
                      .-   .+..+|- -.-=|..+++...+        -....++..+.++|+++...  ....+|+.=-.-+   |+++++.
T Consensus       294 ~~---~i~v~v~a~etNiv~~~l~q~~--------~~~~~l~~~~~k~gi~lm~~--~s~r~Rivlh~Qv---t~~~ve~  357 (384)
T KOG1368|consen  294 PE---EIRVEVPAVETNIVNMVLCQAR--------LTAEELCKFLEKNGILLMGG--ASRRIRIVLHHQV---TDEDVEY  357 (384)
T ss_pred             cc---ceeeecchhhcceeeeeccccc--------CCHHHHHHHHHHCCeEEeec--cccceEEEEEEec---CHHHHHH
Confidence            21   0222332 11224455553221        12466888899999998763  2344555544445   5889998


Q ss_pred             HHhccc
Q psy7882         193 CLDCES  198 (329)
Q Consensus       193 ~l~~~~  198 (329)
                      ++.+.+
T Consensus       358 ~~~~~~  363 (384)
T KOG1368|consen  358 VKSVLS  363 (384)
T ss_pred             HHHHHH
Confidence            888763

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=84.09  E-value=2.6  Score=41.90  Aligned_cols=53  Identities=15%  Similarity=-0.110  Sum_probs=31.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~   63 (329)
                      ..+|+++|.||++... .....  . .+|  .|     +.|.++|....+ |+++++++..+.+.
T Consensus       173 ~~~gi~livD~t~~~~-~~~~p--l-~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~  231 (390)
T PRK08133        173 HAAGALLVVDNCFCTP-ALQQP--L-KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF  231 (390)
T ss_pred             HHcCCEEEEECCCccc-ccCCc--h-hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHH
Confidence            3579999999997421 11111  0 122  46     459998754466 56667777665443

>PRK05367 glycine dehydrogenase; Provisional

Probab=83.92  E-value=4.4  Score=45.35  Aligned_cols=62  Identities=8%  Similarity=-0.091  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHCCceeecc-CCCCCEEEEeCccccCcCCHHHHHHHHhcc--ccchhhhhhhhhhhhcc
Q psy7882         150 MTHILDSCKEHGLLLGRG-GLSGNTLTALQPKLLNYWTDFVGTPCLDCE--SKGTFQSYAGSINKLTG  214 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~-G~~~nvIrl~PPL~It~~t~eeId~~l~~~--~~~~~~~~~~~~~~~~~  214 (329)
                      ...+.++|.+.|+..... -+..+.+++.|--.-   +++|||+++++.  .....+++....|....
T Consensus       824 ~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~---s~~elDr~~~al~~i~~e~~~~~~~~~~~~~  888 (954)
T PRK05367        824 VDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESE---SKAELDRFCDAMIAIRAEIDEVEAGEWPAED  888 (954)
T ss_pred             HHHHHHHHHHCCCeEeecCCccCCEEEEEeeecC---CHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Confidence            356888899999987542 123678999986533   799999999985  23344554545554433

>PTZ00377 alanine aminotransferase; Provisional

Probab=82.57  E-value=38  Score=34.49  Aligned_cols=39  Identities=10%  Similarity=-0.019  Sum_probs=26.0

Q ss_pred             HHHHHHCCceeeccCCC-----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLS-----GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~-----~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.++||.+.|+...     .+.+|+.  +..   +++++++.++..
T Consensus       426 ~~ll~~~gV~v~pG~~F~~~~~~~~~Rls--~~~---~~e~l~~~l~rl  469 (481)
T PTZ00377        426 LELLESTGIVVVPGSGFGQKPGTYHFRIT--ILP---PEEQIEEMVKKI  469 (481)
T ss_pred             HHHHHHcCEEEeCCcccCCCCCCCEEEEE--ECC---CHHHHHHHHHHH
Confidence            45666789999875321     2468874  332   578899988874

>PRK08637 hypothetical protein; Provisional

Probab=82.18  E-value=31  Score=33.81  Aligned_cols=170  Identities=9%  Similarity=-0.032  Sum_probs=79.6

Q ss_pred             ccceEEehhHhhchhccchh----hhhcccCCcch--------HHHh-hcCCccccceeeec------hhHHHhhhhhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTY----LGFQCLQICRF--------VQKD-FKGSFWDKLIVHTS------TCTFENFIKIKY   67 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~----fA~e~~GV~PD--------i~Ka-LgGG~~PigAv~~~------~eI~d~~~~~~~   67 (329)
                      ||+++|.||+...|-..+..    ++. ..+..+.        ++|. ...| +-+|.++..      +++.+.+.....
T Consensus       183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~-~~~~~~~vi~i~~~s~SK~~~~pG-lRlG~~~~~~~~~~~~~l~~~~~~~~~  260 (388)
T PRK08637        183 TKVVAVVDDAYFGLFYEDSYKESLFAA-LANLHSNILAVKLDGATKEEFVWG-FRVGFITFGTKAGSSQTVKEALEKKVK  260 (388)
T ss_pred             CcEEEEecccchhcccCCccchhhHHH-hhcccccceEEEeccccccCCCcc-cceEEEEEccccCCcHHHHHHHHHHHH
Confidence            78999999999887433321    111 1111112        4586 4455 478887743      577766542000


Q ss_pred             ccC-CCCccchhhhccHHHHHHHHhhHHhHHHHHHHHHHHHHHH---HHHHHHhCC---ceeeEE-eeceeeEEEeecCC
Q psy7882          68 QIL-KTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTH---LSKLREEFA---IVGDVR-GKGLMIGVDLVQDK  139 (329)
Q Consensus        68 ~~~-~~~~hg~T~agnlA~aaala~~ile~le~v~~lG~~L~~g---L~eL~~~~p---~v~~VR-G~GLm~gIef~~d~  139 (329)
                      ... ....+.++++. .++.+++....+  ..+++++-..++++   +.++..+++   .+.-.. .-|+++.+.+..  
T Consensus       261 ~~~~~~~~~~s~~~q-~a~~~~l~~~~~--~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--  335 (388)
T PRK08637        261 GLIRSNISNGPHPSQ-SAVLRALNSPEF--DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--  335 (388)
T ss_pred             HHhhcccCCCCcHHH-HHHHHHhCCHHH--HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh--
Confidence            000 00112222211 222333333222  22333332223322   222223332   122122 235666666631  


Q ss_pred             CCCCCCChHHHHHHHHHHH-HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         140 ETKVPLNSRHMTHILDSCK-EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~-e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                              .-..++...|. ++||.+.+.+  .+.+|+.    ++..+++++.+.++..
T Consensus       336 --------~~~~~l~~~l~~~~gv~~~~~~--~~~iRi~----~~~~~~~~i~~~~~~l  380 (388)
T PRK08637        336 --------VDAEELRVHLLEKYGIGTIALN--ETDLRIA----FSCVEEEDIPELFDSI  380 (388)
T ss_pred             --------HHHHHHHHHHhhhcceEEEecc--CCceEEE----eecCCHHHHHHHHHHH
Confidence                    11345777876 6799876532  4567764    2223578888888763

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=82.00  E-value=3.7  Score=40.90  Aligned_cols=53  Identities=8%  Similarity=-0.147  Sum_probs=32.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~   63 (329)
                      ..+|+++|+||.+. .+-.+.     ..+.-.|     +.|.++|--.++ |++++++++.+.+.
T Consensus       171 ~~~gi~livD~a~a-~~~~~~-----~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~  229 (391)
T TIGR01328       171 HSQGVKVIVDNTFA-TPMLTN-----PVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIR  229 (391)
T ss_pred             HHcCCEEEEECCCc-hhccCC-----chhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHH
Confidence            35799999999975 212221     1223356     459998622354 66777888776554

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=81.78  E-value=3.2  Score=41.25  Aligned_cols=52  Identities=12%  Similarity=-0.208  Sum_probs=29.5

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeee-chhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHT-STCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~-~~eI~d~~~   63 (329)
                      ..+|+++|+||.+. |+.-.+    . .+|  .|     +.|.++|.--.+ |++++ ++++.+.+.
T Consensus       164 ~~~gi~livD~t~a~~~~~~~----l-~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~  223 (385)
T PRK08574        164 KELGAILVVDNTFATPLLYRP----L-RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELW  223 (385)
T ss_pred             HHcCCEEEEECCCCccccCCh----h-hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHH
Confidence            35799999999984 332111    1 123  36     459998622234 43444 566666543

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=81.62  E-value=32  Score=34.41  Aligned_cols=44  Identities=18%  Similarity=0.024  Sum_probs=30.6

Q ss_pred             HHHHHHHHHCCceeec----cCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGR----GGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~----~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++|++...    ..+ ..+.+|+.+....   |++|++++++++
T Consensus       394 ~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~---t~e~i~~l~~~L  442 (447)
T PRK00451        394 EEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKR---TKEDIDALVAAL  442 (447)
T ss_pred             HHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCC---CHHHHHHHHHHH
Confidence            4688888999887432    110 1357888876554   689999999985

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=81.61  E-value=3.3  Score=41.18  Aligned_cols=53  Identities=11%  Similarity=-0.128  Sum_probs=31.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~~   63 (329)
                      ..+|+++|+||++. .|-.+..     ...-.|     ..|.++|-- .=.|++.++++.++.+.
T Consensus       162 ~~~g~~livD~t~a-~g~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~  220 (377)
T TIGR01324       162 RNPGIVIMIDNTWA-AGLLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLR  220 (377)
T ss_pred             HHcCCEEEEECCCc-cccccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHH
Confidence            35799999999986 2322221     122357     349997631 12467778877666543

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>KOG2862|consensus

Probab=81.51  E-value=19  Score=35.59  Aligned_cols=180  Identities=14%  Similarity=0.036  Sum_probs=93.2

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhcc----------
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQI----------   69 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~----------   69 (329)
                      +..+|+++|++|-|.+ .|  |.-|.++.|||.=-   -.|+|++= .-++.+..++..++.+.......          
T Consensus       168 lc~k~~~lllVD~VaS-lg--gt~F~mDewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~  243 (385)
T KOG2862|consen  168 LCHKHEALLLVDTVAS-LG--GTEFEMDEWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRL  243 (385)
T ss_pred             HhhcCCeEEEEechhh-cC--CccceehhhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhh
Confidence            5668999999999987 43  55789999998543   23999763 13466777777776665311100          


Q ss_pred             CCCCcc-------chhhhcc--HHHHHHH---HhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882          70 LKTPAH-------KLKISDT--VRPHVQI---KKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV  136 (329)
Q Consensus        70 ~~~~~h-------g~T~agn--lA~aaal---a~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~  136 (329)
                      +..+.-       .+|-.-.  -+..+|+   ..+=+++ +++=++++++|+..|+.+--+.=.+.+--..-..-++-. 
T Consensus       244 ~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~v-  322 (385)
T KOG2862|consen  244 GNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKV-  322 (385)
T ss_pred             cchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeec-
Confidence            000000       0111111  1122222   2233333 667788888888888875110000011001111122221 


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                             |+.-+ ...++..+..++.+....|.   .+.++||- =+-+. .+.+-|+..+++.
T Consensus       323 -------p~gvD-w~dVv~~~~~~~~vei~gglg~~~gKv~RIG-l~gcn-a~~e~i~~v~~ll  376 (385)
T KOG2862|consen  323 -------PYGVD-WKDVVAYAMSHYVVEIGGGLGPTVGKVFRIG-LLGCN-ANVEYIDNVVELL  376 (385)
T ss_pred             -------CCCCC-HHHHHHHHHHhcCEEeccccCCCcccEEEEE-Eeecc-CCcHHHHHHHHHH
Confidence                   11101 34577778877555444332   46788887 12222 2567888888764

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=80.57  E-value=6.6  Score=38.55  Aligned_cols=113  Identities=16%  Similarity=0.016  Sum_probs=54.4

Q ss_pred             ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTS-TCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|.||++ +++.  +.     -...-.|     +.|.++|.- +-.|+++++ +++.+.+..  ..      ..
T Consensus       163 ~~~g~~lIvD~t~~~~~~--~~-----p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~--~~------~~  227 (366)
T PRK08247        163 KKHGLLLIVDNTFYTPVL--QR-----PLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY--YQ------NA  227 (366)
T ss_pred             HHcCCEEEEECCCccccc--cC-----chhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH--HH------Hh
Confidence            4579999999997 2221  11     1111245     459998631 123556665 566665432  00      00


Q ss_pred             hhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEEee
Q psy7882          77 LKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVDLV  136 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIef~  136 (329)
                      .+...+ ..+..++.. +.+.. +++.++..+.+.+.    .+.||.+..|.  |.|.|+++++.
T Consensus       228 ~g~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~----L~~~p~v~~v~~P~~gg~~sf~~~  288 (366)
T PRK08247        228 AGAVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAF----LNEQPGVTDVLYPGRGGMLSFRLQ  288 (366)
T ss_pred             cCCCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHH----HHhCCCeeEEecCCcCcEEEEEEC
Confidence            011111 222222222 22221 33334444444443    44567665543  45889999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	329
3n5m_A	452	Crystals Structure Of A Bacillus Anthracis Aminotra		1e-09
1z3z_A	431	The Crystal Structure Of A Dgd Mutant: Q52a Length		3e-05
1m0n_A	433	Structure Of Dialkylglycine Decarboxylase Complexed		3e-05
1d7r_A	433	Crystal Structure Of The Complex Of 2,2-Dialkylglyc		3e-05
1dgd_A	432	An Alkali Metal Ion Size-Dependent Switch In The Ac		3e-05
2e54_A	385	Crystal Structure Of Acetylornithine Aminotransfera		3e-04

>pdb|3N5M|A Chain A, Crystals Structure Of A Bacillus Anthracis Aminotransferase Length = 452

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 104 GNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKE 159
           G+ LL  L +   E  +VGD+RGKGL++G++LV DKETK P+++  +  ++++CKE
Sbjct: 351 GSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKE 406

>pdb|1Z3Z|A Chain A, The Crystal Structure Of A Dgd Mutant: Q52a Length = 431

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           V+G+ L   L  L E F  +GDVRG+GL++GV++V+D+ TK P + 
Sbjct: 330 VMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADG 375

>pdb|1M0N|A Chain A, Structure Of Dialkylglycine Decarboxylase Complexed With 1- Aminocyclopentanephosphonate Length = 433

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           V+G+ L   L  L E F  +GDVRG+GL++GV++V+D+ TK P + 
Sbjct: 332 VMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADG 377

>pdb|1D7R|A Chain A, Crystal Structure Of The Complex Of 2,2-Dialkylglycine Decarboxylase With 5pa Length = 433

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           V+G+ L   L  L E F  +GDVRG+GL++GV++V+D+ TK P + 
Sbjct: 332 VMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADG 377

>pdb|1DGD|A Chain A, An Alkali Metal Ion Size-Dependent Switch In The Active Site Structure Of Dialkylglycine Decarboxylase Length = 432

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
           V+G+ L   L  L E F  +GDVRG+GL++GV++V+D+ TK P + 
Sbjct: 331 VMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADG 376

>pdb|2E54|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From Thermotoga Maritima Length = 385

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 104 GNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD 138
           GN+L+  L +++EE+ +V DVRG GLMIG+   ++
Sbjct: 299 GNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREE 333

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	329
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	4e-21
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	1e-19
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	5e-18
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	3e-17
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	1e-16
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	4e-16
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	8e-14
3nui_A	478	Pyruvate transaminase; amino transferase, transfer	8e-12
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	1e-11
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	4e-11
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	6e-11
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	1e-10
3hmu_A	472	Aminotransferase, class III; structural genomics,	4e-10
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	9e-10
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	1e-09
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	4e-09
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	6e-09
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	1e-08
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	3e-08
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	5e-08
1z7d_A	433	Ornithine aminotransferase; structural genomics co	8e-08
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	4e-06
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	8e-06
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	2e-05
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	4e-05
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A* Length = 439

 Score = 92.6 bits (231), Expect = 4e-21
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158
                G  L   LS+L +   ++GD+RG+GL  G++LV D++++ P        ++    
Sbjct: 324 MAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREP-ARAETAKLIYRAY 382

Query: 159 EHGLLLGRGGLSGNTL 174
           + GL++   G++GN L
Sbjct: 383 QLGLVVYYVGMNGNVL 398

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A* Length = 433

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G+ L   L  L E F  +GDVRG+GL++GV++V+D+ TK P        I   C   GL
Sbjct: 333 MGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEP-ADGLGAKITRECMNLGL 391

Query: 163 LLG--RGGLSGNTL 174
            +   +    G   
Sbjct: 392 SMNIVQLPGMGGVF 405

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A* Length = 426

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  L   L  + E+   +GDVRG G MI ++L +D +   P +++    I+   ++ GL
Sbjct: 327 LGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP-DAKLTAEIVARARDKGL 385

Query: 163 LLGRGGLSGNTL 174
           +L   G   N L
Sbjct: 386 ILLSCGPYYNVL 397

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A Length = 451

 Score = 81.1 bits (201), Expect = 3e-17
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +   +   L +L+ E   +GDVRG+G MI ++LV+   T  P ++     +       G+
Sbjct: 355 IEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAG-TTEP-DADLTKALCAGAHAAGV 412

Query: 163 LLGRGGLSGNTL 174
           ++   G  GN +
Sbjct: 413 IVLSCGTYGNVV 424

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus} Length = 453

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +   + + LS L EE  I+G+VRG+G M+ +++V+   T  P ++     I       G+
Sbjct: 353 IEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPG-TLEP-DAALTKSIAAEALSQGV 410

Query: 163 LLGRGGLSGNTL 174
           L+   G  GN +
Sbjct: 411 LILTCGTFGNVI 422

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis} Length = 452

 Score = 77.6 bits (192), Expect = 4e-16
 Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 4/76 (5%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G+ LL  L +   E  +VGD+RGKGL++G++LV DKETK P+++  +  ++++CKE GL
Sbjct: 350 MGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGL 409

Query: 163 LLGRGGLS----GNTL 174
           ++GR G++     N L
Sbjct: 410 IIGRNGMTTAGYNNIL 425

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A* Length = 460

 Score = 70.7 bits (174), Expect = 8e-14
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH--ILDS 156
           +    G +    L+K       VG+VRG G++  V+ V DK+ +V  ++       +  +
Sbjct: 353 NAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATA 412

Query: 157 CKEHGLLLGRGGLSGNTLTALQPKL 181
               G++  R    G+ L    P L
Sbjct: 413 LAASGVIG-RAMPQGDIL-GFAPPL 435

>3nui_A Pyruvate transaminase; amino transferase, transferase; 2.00A {Vibrio fluvialis} Length = 478

 Score = 64.9 bits (159), Expect = 8e-12
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL--NSRHMTHILDSCKEH 160
           +       L  + E    +G+ RG G M  ++ V+DK +K P   N      I ++C + 
Sbjct: 366 LAPRFEERLKHIAE-RPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDL 424

Query: 161 GLLL 164
           GL+ 
Sbjct: 425 GLIC 428

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, pyridoxal phosphate, PSI-2, protein structure initiative; 1.70A {Deinococcus radiodurans} Length = 430

 Score = 64.1 bits (157), Expect = 1e-11
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM-THILDSCKEHG 161
            G  LL  L  L+  F  +  VRG GL++GV  + D  T     +  + + I  +  + G
Sbjct: 325 RGAQLLAGLQALQARFPQMMQVRGTGLLLGVV-LGDLATGQAFETPGIASRIGAAALKRG 383

Query: 162 LLL-----GRGGLSGNTL 174
           L+            G+ L
Sbjct: 384 LITYPGSGAEPNGRGDHL 401

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A* Length = 459

 Score = 62.6 bits (153), Expect = 4e-11
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL--NSRHMTHILDSCKEH 160
           +G ++     +    F  V DVRG G++    LV++K  +          T   D    +
Sbjct: 352 IGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRN 411

Query: 161 GLLLGRGG 168
            L++   G
Sbjct: 412 NLIMRACG 419

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A* Length = 472

 Score = 62.3 bits (152), Expect = 6e-11
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 12/73 (16%)

Query: 103 VGNFLLTHLSKLREEF-AIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHG 161
            G  LLT L  L+  +   +  VRG+G     D   +              ++   +  G
Sbjct: 383 AGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRN---------KLISIARNKG 433

Query: 162 LLLGRGGLSGNTL 174
           ++LG  G    ++
Sbjct: 434 VMLGGCG--DKSI 444

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2} Length = 476

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL--NSRHMTHILDSCKEH 160
           + ++    L+ LR+    V + R  GL+  V  + D         +      I + C E 
Sbjct: 358 MADYFAAALASLRD-LPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFEL 416

Query: 161 GLLLGRGG 168
           GL++   G
Sbjct: 417 GLIVRPLG 424

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi} Length = 472

 Score = 59.5 bits (145), Expect = 4e-10
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 102 VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH---ILDSCK 158
           V   +L      L +   +VG+ +  G+M  + L  +K ++    S   T      + C 
Sbjct: 354 VAAPYLKEKWEALTD-HPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCF 412

Query: 159 EHGLLLGRGG 168
            + L++   G
Sbjct: 413 ANNLIMRHVG 422

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii} Length = 419

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 18/83 (21%)

Query: 93  VLERFV-HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151
           +++  + H   +G      L  L        DVRG GL  G++  + K            
Sbjct: 326 IVKDLLPHVNEIGKIFAEELQGL------ADDVRGIGLAWGLEYNEKKVRD--------- 370

Query: 152 HILDSCKEHGLLLGRGGLSGNTL 174
            I+    + GLLL   G   + +
Sbjct: 371 RIIGESFKRGLLLLPAG--RSAI 391

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A Length = 449

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 11/76 (14%)

Query: 95  ERFV-HTYVVGNFLLTHLSKLREEF-AIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH 152
           E         G +L   L +L  +F A+V D RG+GLM    L    +            
Sbjct: 351 EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRD---------E 401

Query: 153 ILDSCKEHGLLLGRGG 168
           ++    +  +++   G
Sbjct: 402 LIRQLWQRAVIVLPAG 417

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A* Length = 420

 Score = 56.4 bits (137), Expect = 4e-09
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 9/72 (12%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
                + HL  + E+F I  D+RG GL+IG +L    + +           L +  E G+
Sbjct: 329 KRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRA-------RDFLYAGAEAGV 381

Query: 163 LLGRGGLSGNTL 174
           ++   G   + +
Sbjct: 382 MVLNAG--ADVM 391

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida} Length = 449

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 10/66 (15%), Positives = 19/66 (28%), Gaps = 5/66 (7%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           V       L  ++     V D+R  GL   + +       +            +  + G 
Sbjct: 357 VAPHFEKALHGIKG-AKNVIDIRNFGLAGAIQIAPRDGDAIVRPFE----AGMALWKAGF 411

Query: 163 LLGRGG 168
            +  GG
Sbjct: 412 YVRFGG 417

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} PDB: 3drd_A 3du4_A* Length = 448

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHILDSCKEH 160
               L   L  L      VGD+R  G M G +LV+ KETK P  +  R    +    +E 
Sbjct: 347 KSKKLHFLLQDLHA-LPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMREL 405

Query: 161 GLLL 164
           G+L 
Sbjct: 406 GMLT 409

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A* Length = 397

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 11/72 (15%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
            GN+L+  L +++EE+ +V DVRG GLMIG+   ++   +          +   C E+ L
Sbjct: 310 KGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNRE---------VATKCFENKL 360

Query: 163 LLGRGGLSGNTL 174
           L+   G   NT+
Sbjct: 361 LVVPAG--NNTI 370

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp} Length = 395

 Score = 52.9 bits (128), Expect = 5e-08
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 11/72 (15%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +  +L   L +L  EF      +G G M G+ L +  +            ++  C+E+ L
Sbjct: 308 LTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSVKVA---------KVIQKCQENAL 358

Query: 163 LLGRGGLSGNTL 174
           LL   G   N L
Sbjct: 359 LLISCG--ENDL 368

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A Length = 433

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G   L +L +  ++  IV DVRGKGL+  ++   +    + +  +         KE+GL
Sbjct: 341 LGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLK--------LKENGL 392

Query: 163 LL 164
           + 
Sbjct: 393 IT 394

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A* Length = 439

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G  L   L KL  +  +V  VRGKGL+  + + + K+            +    +++GL
Sbjct: 352 LGIILRNELMKLPSD--VVTAVRGKGLLNAIVIKETKDWDAW-------KVCLRLRDNGL 402

Query: 163 LL 164
           L 
Sbjct: 403 LA 404

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A* Length = 831

 Score = 46.5 bits (110), Expect = 8e-06
 Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 106 FLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLL 164
           +    + ++    + V  V   G +  ++L  D        S +   +L   +E G+  
Sbjct: 738 WDEELVQQISS-HSAVQRVVVIGTLFALELKADASNS-GYASLYAKSLLIMLREDGIFT 794

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A* Length = 395

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 12/62 (19%)

Query: 103 VGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGL 162
           +G + +  L  +      + +VRG GLM+G++L +     +              KEH +
Sbjct: 313 LGPWFMEKLRAIPSPK--IREVRGMGLMVGLELKEKAAPYI----------ARLEKEHRV 360

Query: 163 LL 164
           L 
Sbjct: 361 LA 362

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus} Length = 375

 Score = 44.0 bits (105), Expect = 4e-05
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 19/83 (22%)

Query: 93  VLERFV-HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT 151
            +E+ + H   VGN+    L +L +       V+G+GLM+G++L ++             
Sbjct: 287 EVEKLLPHVREVGNYFKEKLKELGKG-----KVKGRGLMLGLELERE-----------CK 330

Query: 152 HILDSCKEHGLLLGRGGLSGNTL 174
             +    E GLL+      G  L
Sbjct: 331 DYVLKALEKGLLINCTA--GKVL 351

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} Length = 392

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 14/71 (19%)

Query: 95  ERFV-HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI 153
           E+    +  +G  L+  L ++     ++ +VRGKGL IG++L +                
Sbjct: 302 EKLTERSLQLGEKLVGQLKEIDNP--MITEVRGKGLFIGIELNEPA-----------RPY 348

Query: 154 LDSCKEHGLLL 164
            +  K  GLL 
Sbjct: 349 CEQLKAAGLLC 359

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 62/378 (16%), Positives = 106/378 (28%), Gaps = 118/378 (31%)

Query: 10  GVVVSAVDFGSGDNGTYLGFQCL--QICRF--VQKDFKGS-FWDKLI-VHTSTCTFENFI 63
            V++       G  G+  G   +   +C    VQ       FW  L   ++     E   
Sbjct: 152 NVLID------GVLGS--GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 64  KIKYQILKTPAHKLKISDTVRPHVQIKKSVLERFVHTYVVGNFLLTHL-----SKLREEF 118
           K+ YQI      +   S  ++  +   ++ L R + +    N LL  L     +K    F
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV-LLNVQNAKAWNAF 262

Query: 119 AIVGDVRGKGLMIGVD------LVQDKETKVPLNSRHMTHILDSCKEHGLL--------- 163
               ++  K L+          L     T + L+  H +  L   +   LL         
Sbjct: 263 ----NLSCKILLTTRFKQVTDFLSAATTTHISLD--HHSMTLTPDEVKSLLLKYLDCRPQ 316

Query: 164 -LGRGGLSGNTL------TALQ--PKLLNYWTDFVGTPCLDCESKGTFQSYAGSINKLTG 214
            L R  L+ N         +++      + W        ++C+   T      S+N L  
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKH------VNCDKLTTIIE--SSLNVL-- 366

Query: 215 KNSSNTLKNAFRKNRLQLLPLREKIFCRNLNNGRIRFVPAGRIPIIRPNFSTA-----AA 269
                  +  F +  L + P    I             P   + +I  +   +       
Sbjct: 367 --EPAEYRKMFDR--LSVFPPSAHI-------------PTILLSLIWFDVIKSDVMVVVN 409

Query: 270 KLAD----ERDTLRST----------NPSDPKLKELNYTIRKMVYEYKKNKWLE------ 309
           KL      E+    ST                   L+   R +V  Y   K  +      
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH---RSIVDHYNIPKTFDSDDLIP 466

Query: 310 -------------HLKEA 314
                        HLK  
Sbjct: 467 PYLDQYFYSHIGHHLKNI 484

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	329
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	100.0
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	100.0
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.98
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.97
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.96
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.96
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.95
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.95
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.95
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.94
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.94
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.94
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.94
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.92
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.91
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.91
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.89
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.89
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.89
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.88
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.88
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.79
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.87
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.86
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.86
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.86
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.85
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.85
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.85
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.85
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.83
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.83
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.82
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.8
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.79
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.77
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.72
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.61
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.58
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.44
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.31
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.22
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.17
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.13
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.11
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.1
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.04
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.03
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.03
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.02
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.02
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.02
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.01
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	98.99
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	98.99
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	98.99
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	98.96
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	98.96
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	98.96
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	98.95
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	98.94
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	98.93
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	98.93
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	98.93
3nra_A	407	Aspartate aminotransferase; structural genomics, j	98.93
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	98.92
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	98.9
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	98.9
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	98.9
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	98.89
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	98.89
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	98.89
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	98.89
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	98.87
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	98.87
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	98.86
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	98.85
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	98.85
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	98.83
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	98.83
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	98.82
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	98.82
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	98.81
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	98.3
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	98.8
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	98.8
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	98.8
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	98.79
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	98.78
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	98.77
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	98.76
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	98.75
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	98.75
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	98.74
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	98.73
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	98.72
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	98.71
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	98.71
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	98.69
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	98.67
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	98.66
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	98.66
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	98.65
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	98.63
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	98.63
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	98.63
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	98.62
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	98.6
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	98.57
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	98.57
3ele_A	398	Amino transferase; RER070207001803, structural gen	98.57
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	98.56
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	98.53
3rq1_A	418	Aminotransferase class I and II; structural genomi	98.52
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	98.5
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	98.5
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	98.5
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	98.49
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	98.49
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	98.49
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	98.49
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	98.49
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	98.48
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	98.48
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	98.48
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	98.47
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	98.47
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	98.45
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	98.45
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	98.45
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	98.43
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	98.42
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	98.36
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	98.35
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	98.32
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	98.32
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	98.32
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	98.3
1iug_A	352	Putative aspartate aminotransferase; wild type, py	98.3
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	98.29
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	98.29
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	98.29
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	98.27
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	98.26
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	98.25
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	98.23
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	98.22
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	98.22
1svv_A	359	Threonine aldolase; structural genomics, structura	98.2
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	98.15
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	98.13
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	98.13
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	98.1
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	98.06
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	98.06
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	98.04
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	98.03
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	98.02
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	98.0
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	97.99
2fnu_A	375	Aminotransferase; protein-product complex, structu	97.99
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	97.98
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	97.98
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	97.96
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	97.96
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	97.95
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	97.95
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	97.95
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	97.9
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	97.88
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	97.81
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	97.77
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	97.75
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	97.73
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	97.73
1o69_A	394	Aminotransferase; structural genomics, unknown fun	97.7
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	97.69
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	97.66
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	97.6
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	97.58
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	97.57
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	97.51
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	97.49
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	97.47
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	97.46
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	97.46
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	97.46
3pj0_A	359	LMO0305 protein; structural genomics, joint center	97.45
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	97.44
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	97.38
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	97.34
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	97.34
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	97.32
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	97.26
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	97.19
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	97.15
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	97.14
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	97.06
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	97.04
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	96.9
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	96.68
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	96.61
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	96.54
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	96.1
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	96.0
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	95.92
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	95.9
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	95.89
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	95.87
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	95.85
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	95.07
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	95.02
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	94.77
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	94.41
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	94.03
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	94.01
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	93.94
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	93.62
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	93.59
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	93.38
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	92.93
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	92.37
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	91.81
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	91.66
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	91.43
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	90.64
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	90.36
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	84.76
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	84.32
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	81.67
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	80.81

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=100.00  E-value=7.4e-41  Score=336.58  Aligned_cols=187  Identities=19%  Similarity=0.246  Sum_probs=165.7

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ++-+||+|||+|||||||||||++|+++++||+||   ++|+|+||++|+||++++++||+.|... .....++.|++||
T Consensus       265 lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~-~~~~~~~~hg~T~  343 (473)
T 4e3q_A          265 ILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETA-IEAIEEFPHGFTA  343 (473)
T ss_dssp             HHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHH-HHHHSCCCCCCTT
T ss_pred             HhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhccc-cccccccccCCCC
Confidence            34578999999999999999999999999999999   6899999988999999999999988641 1122347899999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTH  152 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~  152 (329)
                      +|| ++|++++++ +++++   +++++++|++|+++|+++. ++|.|.+|||.|+|++|+|..++.++.+++.  ....+
T Consensus       344 ~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~-~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~  422 (473)
T 4e3q_A          344 SGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIA-ERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSER  422 (473)
T ss_dssp             TTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHT-TSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHH
T ss_pred             CCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHh-cCCCeeEEeecceEEEEEEecCccccccccccHHHHHH
Confidence            999 999999999 88876   8999999999999999986 4678999999999999999888777777753  36778


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|+++||++++.   +++++|+|||++   |++|||++++++
T Consensus       423 ~~~~~~~~Gll~~~~---g~~i~l~PPL~i---t~~eid~~~~~l  461 (473)
T 4e3q_A          423 IANTCTDLGLICRPL---GQSVVLCPPFIL---TEAQMDEMFDKL  461 (473)
T ss_dssp             HHHHHHHTTEECEEE---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHCCcEEEec---CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            999999999999986   589999999999   589999999985

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=100.00  E-value=1.3e-40  Score=333.33  Aligned_cols=181  Identities=18%  Similarity=0.282  Sum_probs=162.4

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-+||+|||+|||||||||||++|++++|||+||   ++|+++||+ |+||+++++++|+.+.+        ..|++||
T Consensus       255 lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~-P~~av~~~~~i~~~~~~--------~~~~~Tf  325 (456)
T 4atq_A          255 WAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGL-PLSAITGRADLLDAVHP--------GGLGGTY  325 (456)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-SCEEEEEEHHHHTTSCT--------TSSCCSS
T ss_pred             HHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcC-CceeeEecHHHHhcccc--------cCCCCCC
Confidence            34578999999999999999999999999999999   689999995 99999999999988763        6799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhC-----CceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEF-----AIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~-----p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +|| ++|++++++ +++++   +++++++|++|+++|+++++++     +.|.+|||+|+|+||+|..+. .+.| +.+.
T Consensus       326 ~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~-~~~~-~~~~  403 (456)
T 4atq_A          326 GGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPG-SKEP-NAEL  403 (456)
T ss_dssp             SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTT-SCCB-CHHH
T ss_pred             CCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCC-CCCc-CHHH
Confidence            999 999999999 98876   8999999999999999999885     569999999999999998643 2333 3567


Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++...|+++||++.++|..+|+|+|.|||++   |++|||++++++
T Consensus       404 ~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~i---t~~~id~~l~~l  448 (456)
T 4atq_A          404 TKAVAAACLKEGVIILTCGTYGNVIRLLPPLVI---SDELLIDGLEVL  448 (456)
T ss_dssp             HHHHHHHHHHTTEECEEECTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            888999999999999999888999999999999   589999999986

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.98  E-value=1.6e-32  Score=274.94  Aligned_cols=179  Identities=12%  Similarity=-0.010  Sum_probs=151.0

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ++-+||+|||+|||||  ||||.+|+++++||+||   ++|+||||+ |+||++++++||+.+.+   . ...+.|++||
T Consensus       249 lc~~~g~lLI~DEV~t--GR~G~~~a~e~~gv~PDi~t~gK~lggG~-Piga~~~~~ei~~~~~~---~-~~~~~h~~T~  321 (454)
T 4ao9_A          249 SATQVGALLVFDEVMT--SRLAPHGLANKLGIRSDLTTLGKYIGGGM-SFGAFGGRADVMALFDP---R-TGPLAHSGTF  321 (454)
T ss_dssp             HHHHHTCEEEEECTTG--GGGSTTCHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHGGGCT---T-TCSCCCCCTT
T ss_pred             HHhhcCCEEEEECCCc--CCCccccchhccCCCCcEEEeccccCCCC-cceeeeeHHHHHHHHhh---c-cCCccccCCC
Confidence            4567899999999999  49999999999999999   689999995 99999999999998863   1 1246899999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC----CCCChHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK----VPLNSRHM  150 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~----~p~~~~~~  150 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++.++++.+.+|||.|+|++++|++++...    ...+....
T Consensus       322 ~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~  401 (454)
T 4ao9_A          322 NNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLR  401 (454)
T ss_dssp             TTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHH
Confidence            999 999999999 88865   8999999999999999999999999999999999999997643211    01134567


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|+++||++.|.+   +   +.|++.   ||++|||++++++
T Consensus       402 ~~~~~~ll~~Gv~~~p~~---~---~~~s~~---~T~~dId~~l~al  439 (454)
T 4ao9_A          402 QLLFFHLLNEDIYSSPRG---F---VVLSLP---LTDADIDRYVAAI  439 (454)
T ss_dssp             HHHHHHHHHTTEECCTTC---E---EECCTT---CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEcCCC---C---EEEeCC---CCHHHHHHHHHHH
Confidence            788999999999998754   2   344544   4799999999985

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.97  E-value=1.2e-31  Score=285.80  Aligned_cols=185  Identities=16%  Similarity=0.074  Sum_probs=151.3

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .-+||++||+|||||||||||++|+++++||+||   ++|+|+|||+|+|+++++++|++.|..  ......+.|++||+
T Consensus       625 c~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~--~~~~~~~~hg~T~~  702 (831)
T 4a0g_A          625 CRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSG--DSKLKALLHGHSYS  702 (831)
T ss_dssp             HHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCS--SCGGGSCCCCCTTT
T ss_pred             HHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCccCcEEEEECHHHHHHHhc--ccccccceeecCCc
Confidence            4568999999999999999999999999999999   689999998899999999999998863  11112467999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHH----HHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLT----HLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~----gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      +| ++|++++++ +++++   .+++.++++++++    .+.+...++|.+.+|||.|+|++|++..+.. +.+++...+.
T Consensus       703 g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~-~~~~~~~~a~  781 (831)
T 4a0g_A          703 AHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADAS-NSGYASLYAK  781 (831)
T ss_dssp             TCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC----------CHHHH
T ss_pred             ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCcc-ccccchHHHH
Confidence            99 999999999 88765   5677777776643    4555556799999999999999999975432 2233345677


Q ss_pred             HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|+++||++.+.   +++|||+||+++   |++|||++++++
T Consensus       782 ~~~~~l~e~Gv~v~p~---g~~lrl~pp~~~---t~e~id~~~~~l  821 (831)
T 4a0g_A          782 SLLIMLREDGIFTRPL---GNVIYLMCGPCT---SPEICRRLLTKL  821 (831)
T ss_dssp             HHHHHHHHTTEECCCB---TTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            8999999999999975   589999999998   589999999985

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.96  E-value=9.5e-30  Score=253.87  Aligned_cols=181  Identities=17%  Similarity=0.210  Sum_probs=156.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++|+.||   ++|+|+||++|+|++++++++++.+..      ..+.|++||+
T Consensus       253 ~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~------~~~~~~~t~~  326 (472)
T 3hmu_A          253 CDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGK------DEFNHGYTYS  326 (472)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTT------SCBCCCCTTT
T ss_pred             HHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEEEEECHHHHHhccc------CCccccCCCC
Confidence            3468999999999999999999999999999999   679999998899999999999998831      1368999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHH-HHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC---hHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTY-VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN---SRHMT  151 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~-~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~---~~~~~  151 (329)
                      +| ++|++++++ +++++   +++++ +++++++++|+++. ++|.+.++||.|+|+++++..+...+.+++   .....
T Consensus       327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~  405 (472)
T 3hmu_A          327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT-DHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGY  405 (472)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG-GSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCceEEEEEecCccccccccchhHHHHH
Confidence            99 999999998 87754   88999 99999999998874 589999999999999999975543333432   23567


Q ss_pred             HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|+++||++.++|   +++||.||+++   |++||+++++++
T Consensus       406 ~~~~~l~~~Gv~v~~~g---~~iRi~p~~~~---t~e~i~~~l~~l  445 (472)
T 3hmu_A          406 ICRERCFANNLIMRHVG---DRMIISPPLVI---TPAEIDEMFVRI  445 (472)
T ss_dssp             HHHHHHHHTTBCCEEET---TEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcEEEecC---CEEEEECCCCC---CHHHHHHHHHHH
Confidence            78999999999999864   89999999999   589999999986

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.96  E-value=8.4e-30  Score=254.29  Aligned_cols=198  Identities=14%  Similarity=0.125  Sum_probs=160.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhc-ccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQ-CLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e-~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ..+||++||+|||+|||||||.+|+++ ++|+.||   ++|+|+|||+|+|++++++++++.+... ......+.|++||
T Consensus       251 c~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~-~~~~~~~~~~~t~  329 (476)
T 3i5t_A          251 CEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGE-NAKGSWFTNGYTY  329 (476)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGG-GCTTCEECCCCTT
T ss_pred             HHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcC-CcccccccccCCC
Confidence            346899999999999999999999999 9999999   6799999977999999999999987631 0011235799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTH  152 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~  152 (329)
                      ++| ++|++++++ +++++   ++++++++++++++|+++. ++|.+.++||.|+|+++++..+..++.+++.  .....
T Consensus       330 ~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~  408 (476)
T 3i5t_A          330 SNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR-DLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLK  408 (476)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT-TSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCceeEEEEecCccccccccchhHHHHH
Confidence            999 999999998 87754   8899999999999999764 7899999999999999999765443444422  24667


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhhhhhhh
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSYAGSIN  210 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~~~~~~  210 (329)
                      +...|+++||++.++|   +++||.||+++   +++||+++++++. ....++....+
T Consensus       409 ~~~~l~~~Gv~v~~~g---~~iRi~p~l~~---t~e~i~~~l~~l~-~~l~~~~~~~~  459 (476)
T 3i5t_A          409 IDERCFELGLIVRPLG---DLCVISPPLII---SRAQIDEMVAIMR-QAITEVSAAHG  459 (476)
T ss_dssp             HHHHHHHTTEECEEET---TEEEECCCTTC---CHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHCCCEEEecC---CEEEEECCCCC---CHHHHHHHHHHHH-HHHHHHHHHhC
Confidence            8899999999999864   89999999999   5899999999862 34444444433

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.95  E-value=1.6e-27  Score=235.33  Aligned_cols=189  Identities=18%  Similarity=0.215  Sum_probs=160.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++|+.||   ++|+|+||++|+|++++++++++.+... ......+.|++||+
T Consensus       251 ~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~-~~~~~~~~~~~t~~  329 (460)
T 3gju_A          251 LKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQG-SDKLGSLGHGWTYS  329 (460)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHH-HHHHCSCSCCCTTT
T ss_pred             HHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcc-cccccccccCCCCC
Confidence            3468999999999999999999999999999999   6799999978999999999999988520 00012368999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh--HHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS--RHMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~--~~~~~~  153 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|++...++|.+..+||.|+|+++++..+...+.++..  .....+
T Consensus       330 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (460)
T 3gju_A          330 AHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQV  409 (460)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHH
Confidence            99 999999988 77654   889999999999999888888999999999999999999765443344422  346778


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++.+++ .++.+||.||+++   |++||+++++++
T Consensus       410 ~~~l~~~Gv~v~~~~-~~~~iRi~~~~~~---t~e~i~~~l~~l  449 (460)
T 3gju_A          410 ATALAASGVIGRAMP-QGDILGFAPPLCL---TREQADIVVSKT  449 (460)
T ss_dssp             HHHHHHTTEECEECS-SSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHCCeEEecCC-CCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            999999999999876 4589999999998   589999999985

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.95  E-value=1.9e-27  Score=234.69  Aligned_cols=183  Identities=19%  Similarity=0.212  Sum_probs=156.5

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++++.||   ++|+|+||++|+|++++++++++.+..  .   ..+.|++||+
T Consensus       249 ~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~--~---~~~~~~~t~~  323 (459)
T 4a6r_A          249 CRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIA--G---GDFNHGFTYS  323 (459)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHH--H---CTTHHHHHHC
T ss_pred             HHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccceeeCHHHHHHhhc--C---CCcccCCCCC
Confidence            3468999999999999999999999999999999   679999998899999999999998863  1   1367899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHH-HHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC--hHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTY-VVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN--SRHMTH  152 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~-~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~--~~~~~~  152 (329)
                      +| ++|+++++. +.+++   +++++ ++++++++.|.+...++|.+.++||.|+|+++++..+...+.+|.  ......
T Consensus       324 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (459)
T 4a6r_A          324 GHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTL  403 (459)
T ss_dssp             SCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHH
Confidence            99 999999998 77654   88999 999999999944446789999999999999999976544444442  235677


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|+++||++.++|   +.+||.||+++   |++|++++++++
T Consensus       404 ~~~~l~~~Gv~v~~~g---~~iRi~~~~~~---t~e~i~~~l~~l  442 (459)
T 4a6r_A          404 CRDIFFRNNLIMRACG---DHIVSAPPLVM---TRAEVDEMLAVA  442 (459)
T ss_dssp             HHHHHHHTTEECEEET---TEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHCCeEEecCC---CEEEEECCCCC---CHHHHHHHHHHH
Confidence            8899999999999864   89999999998   589999999985

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.95  E-value=3.9e-27  Score=231.15  Aligned_cols=189  Identities=24%  Similarity=0.410  Sum_probs=160.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++++.||   ++|++++|++|+|++++++++++.+..  ......+.|++||+
T Consensus       245 ~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~--~~~~~~~~~~~t~~  322 (452)
T 3n5m_A          245 CQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKG--KGEYEFFRHINTFG  322 (452)
T ss_dssp             HHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCS--SSTTCSCCCCCSST
T ss_pred             HHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhh--ccCCCCccccCCCC
Confidence            3468999999999999999999999999999999   689999997799999999999988742  00112467999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|+++..++|.+..++|.|+|+++++..+.....+++......+.+
T Consensus       323 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  402 (452)
T 3n5m_A          323 GNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVN  402 (452)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHH
Confidence            99 999999988 76654   88999999999999999988899999999999999999975443334444455667899


Q ss_pred             HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++.    .++.+||.||+++   |++||+++++++
T Consensus       403 ~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l  445 (452)
T 3n5m_A          403 ACKEKGLIIGRNGMTTAGYNNILTLAPPLVI---SSEEIAFVIGTL  445 (452)
T ss_dssp             HHHHTTEECEECTTSSTTCCCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHCCcEEeecCcccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            99999999998652    2689999999998   589999999975

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.94  E-value=7.3e-27  Score=231.90  Aligned_cols=174  Identities=14%  Similarity=0.093  Sum_probs=151.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||+|||||+|.+|+++++|+.||   ++|+|+||++|+|++++++++++.+..   .....+.|++||++
T Consensus       265 ~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~---~~~~~~~~~~t~~~  341 (457)
T 3tfu_A          265 RRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISA---GAAGALMHGPTFMA  341 (457)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHH---SSSCSCCCCCTTTT
T ss_pred             HHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhhc---cCCCceeEecCCCc
Confidence            467999999999999999999999999999999   689999998899999999999998852   11123589999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|++++++ +++++   .+++++++++++++|+++. +++.+.++|+.|+|+++++..+.      +   ...+.+.
T Consensus       342 n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~v~~vr~~G~~~~i~l~~~~------~---~~~~~~~  411 (457)
T 3tfu_A          342 NPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-ALPAVTDVRVCGAIGVIECDRPV------D---LAVATPA  411 (457)
T ss_dssp             CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-GSTTEEEEEECSSCEEEEESSCC------C---HHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cCCCeeeeecCCeEEEEEECCcc------c---HHHHHHH
Confidence            9 999999998 77754   7899999999999999986 68889999999999999996421      1   4568899


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+.   ++.+||.||+++   |++|++++++++
T Consensus       412 l~~~Gv~v~~~---~~~lRi~p~~~~---t~eei~~~l~~L  446 (457)
T 3tfu_A          412 ALDRGVWLRPF---RNLVYAMPPYIC---TPAEITQITSAM  446 (457)
T ss_dssp             HHHTTEECCCB---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCeEEEec---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            99999999875   589999999998   589999999985

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.94  E-value=1.5e-26  Score=228.81  Aligned_cols=180  Identities=18%  Similarity=0.242  Sum_probs=156.9

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++|+.||   ++|++++| +|+|++++++++++.+.+        ..|++||+
T Consensus       255 ~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~i~~~~~~--------~~~~~t~~  325 (453)
T 4ffc_A          255 ASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYA--------GGLGGTYG  325 (453)
T ss_dssp             HHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCT--------TSSCCSSS
T ss_pred             HHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCC-cCeEEEEECHHHHhhhcc--------cCcCCCCC
Confidence            3468999999999999999999999999999999   67999999 599999999999987653        56899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|+++..++|.+..++|.|+|++++|.. ...+.| +......+.+
T Consensus       326 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~  403 (453)
T 4ffc_A          326 GNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVK-PGTLEP-DAALTKSIAA  403 (453)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBC-TTSCCB-CHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEec-CcccCC-CHHHHHHHHH
Confidence            99 999999988 76654   78999999999999999999999999999999999999964 222222 2345677899


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++..++.+||.||+++   +++||+++++++
T Consensus       404 ~l~~~Gv~v~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l  442 (453)
T 4ffc_A          404 EALSQGVLILTCGTFGNVIRLLPPLVI---GDDLLDEGITAL  442 (453)
T ss_dssp             HHHHTTEECCEECTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHhCCCEEecCCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            999999999998766799999999998   589999999985

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.94  E-value=2.2e-26  Score=227.18  Aligned_cols=180  Identities=18%  Similarity=0.225  Sum_probs=156.9

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++|+.||   ++|++++| +|+|++++++++++.+.+        ..|++||+
T Consensus       257 ~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~iG~v~~~~~~~~~~~~--------~~~~~t~~  327 (451)
T 3oks_A          257 CRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHV--------SGLGGTYG  327 (451)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTCSCT--------TSBCCSSS
T ss_pred             HHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCC-cceEEEEECHHHHhhhcC--------CCcCCCCC
Confidence            4568999999999999999999999999999999   67999999 599999999999987653        56899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|+++..++|.+..++|.|+|+++++.. ...+.| +......+.+
T Consensus       328 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~-~~~~~~~~~~  405 (451)
T 3oks_A          328 GNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVK-AGTTEP-DADLTKALCA  405 (451)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBS-TTSCCB-CHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEec-CccCCC-CHHHHHHHHH
Confidence            99 999999988 76654   88999999999999999998999999999999999999964 222222 2345677899


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++..++.+||.||+++   +++||+++++++
T Consensus       406 ~l~~~Gv~v~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l  444 (451)
T 3oks_A          406 GAHAAGVIVLSCGTYGNVVRFLPPLSI---GDDLLNEGLDVL  444 (451)
T ss_dssp             HHHHTTEECEEECTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHhCCcEEecCCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            999999999998766799999999998   589999999985

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.94  E-value=4.7e-26  Score=223.84  Aligned_cols=186  Identities=21%  Similarity=0.238  Sum_probs=155.7

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||+|||||+|.+|+++++|+.||   ++|++++|++|+|++++++++++.+... ......+.|++||+
T Consensus       241 ~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~-~~~~~~~~~~~t~~  319 (448)
T 3dod_A          241 CTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDD-YENLKTFFHGHSYT  319 (448)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSC-GGGCCCCCCCCTTT
T ss_pred             HHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHHHhhhc-cccCCcccccCCCC
Confidence            3468999999999999999999999999999999   6799999967999999999999887520 00112367899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH--HHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR--HMTHI  153 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~--~~~~~  153 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|++ ...+|.+..++|.|+|+++++..+.....+++..  ....+
T Consensus       320 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (448)
T 3dod_A          320 GNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKV  398 (448)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHH
T ss_pred             cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHH
Confidence            99 999999988 77654   78999999999999999 6778989999999999999997654333344322  24678


Q ss_pred             HHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|+++||++.+.   ++.+||.||+++   |++||+++++++
T Consensus       399 ~~~l~~~Gv~~~~~---~~~iRi~~~~~~---t~e~i~~~l~~l  436 (448)
T 3dod_A          399 SLKMRELGMLTRPL---GDVIAFLPPLAS---TAEELSEMVAIM  436 (448)
T ss_dssp             HHHHHHTTEECCEE---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHCCcEEecc---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            89999999999885   489999999998   589999999985

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.92  E-value=1.4e-24  Score=213.20  Aligned_cols=173  Identities=19%  Similarity=0.220  Sum_probs=148.9

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+||||+||||+|.+++++++|+.||   ++|+++||++|+|++++++++++.+..        ..|++||+
T Consensus       242 ~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~--------~~~~~t~~  313 (433)
T 1z7d_A          242 CKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP--------GEHGSTYG  313 (433)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT--------TCCCCTTT
T ss_pred             HHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhcc--------ccccccCC
Confidence            3467999999999999999999999999999999   679999996699999999999876642        46889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|+++++. +.+++   .+++++++++|+++|+++...++.+..++|.|+|+++++..+..        ....+.+
T Consensus       314 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~--------~~~~~~~  385 (433)
T 1z7d_A          314 GNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELV--------NVLDICL  385 (433)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTC--------CHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChh--------HHHHHHH
Confidence            99 999998888 76654   78999999999999999876788888999999999999964210        1346888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.+++  ++.+|+.||+++   +++||+++++++
T Consensus       386 ~l~~~Gv~v~~~~--~~~iRi~~~~~~---t~e~i~~~l~~l  422 (433)
T 1z7d_A          386 KLKENGLITRDVH--DKTIRLTPPLCI---TKEQLDECTEII  422 (433)
T ss_dssp             HHHHTTEECCEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHCCeEEecCC--CCEEEEECCcCC---CHHHHHHHHHHH
Confidence            9999999998863  689999999988   589999999985

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.91  E-value=3.1e-24  Score=208.63  Aligned_cols=185  Identities=19%  Similarity=0.171  Sum_probs=148.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhccc-CCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .+||++||+|||++||||+|.+++++++ ++.||   ++|++++||+|+|++++++++++.+..  .  ..++.|++||+
T Consensus       222 ~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~--~--~~~~~~~~t~~  297 (430)
T 3i4j_A          222 DEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMG--G--SGAFMHGFTYA  297 (430)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHH--T--TCBCCCCCTTT
T ss_pred             HHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhc--c--CCcccccCCCC
Confidence            4679999999999999999999999999 99999   679999997799999999999998864  1  11357899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC-hHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN-SRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~-~~~~~~~~  154 (329)
                      +| ++|+++++. +.+++   +++++++++++++.|+++..++|.+..+++.|+|+++++. +.....+++ ......+.
T Consensus       298 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~  376 (430)
T 3i4j_A          298 GHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLG-DLATGQAFETPGIASRIG  376 (430)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC-------------CHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEec-cccccCCCccHHHHHHHH
Confidence            99 999999887 66544   7899999999999999998889999999999999999996 322222221 12246788


Q ss_pred             HHHHHCCceeecc-----CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRG-----GLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~-----G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++||++.++     +..++.+|+.||+++   +++|++++++++
T Consensus       377 ~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l  421 (430)
T 3i4j_A          377 AAALKRGLITYPGSGAEPNGRGDHLLLGPPLSI---TAAEVDGLLALL  421 (430)
T ss_dssp             HHHHHTTEECC-----------CEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHhCCCEEEecccccCCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            9999999999886     224689999999998   589999999985

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.91  E-value=5.8e-24  Score=209.36  Aligned_cols=171  Identities=18%  Similarity=0.215  Sum_probs=145.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||||||||+|.+|+++++|+.||   ++|+++||++|+|++++++++++.+..        ..|++||++
T Consensus       254 ~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~--------~~~~~t~~~  325 (439)
T 2oat_A          254 TRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP--------GEHGSTYGG  325 (439)
T ss_dssp             HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT--------TSSCCSSTT
T ss_pred             HHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCC--------CCcccCCCc
Confidence            468999999999999999999999999999999   579999996699999999999876642        468899999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|+++++. +.+++   .+++++++++|+++|+++  .++.+.+++|.|+|+++++..+..    .   ....+.+.
T Consensus       326 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l--~~~~~~~~~~~g~~~~v~l~~~~~----~---~~~~l~~~  396 (439)
T 2oat_A          326 NPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL--PSDVVTAVRGKGLLNAIVIKETKD----W---DAWKVCLR  396 (439)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS--CTTTEEEEEEETTEEEEEECCCSS----C---CHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh--cCCCcEEEEeeeeEEEEEEecCcc----H---HHHHHHHH
Confidence            9 999998888 76654   789999999999999887  477778899999999999964210    0   13468889


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+.+  ++.+|+.||+++   +++|++++++++
T Consensus       397 l~~~Gv~v~~~~--~~~iRi~~~~~~---t~e~i~~~l~~l  432 (439)
T 2oat_A          397 LRDNGLLAKPTH--GDIIRFAPPLVI---KEDELRESIEII  432 (439)
T ss_dssp             HHHTTEECCBSS--SSEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCeEEecCC--CCEEEEECccCC---CHHHHHHHHHHH
Confidence            999999998853  689999999987   589999999985

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.89  E-value=1.7e-22  Score=196.78  Aligned_cols=179  Identities=21%  Similarity=0.271  Sum_probs=152.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||++||||+|.+++++++++.||   ++|++++|+ |+|++++++++++.+..        ..|++|| +
T Consensus       232 ~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~-riG~~~~~~~~~~~~~~--------~~~~~t~-~  301 (439)
T 3dxv_A          232 RAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGL-PLSAVIAPAEILDCASA--------FAMQTLH-G  301 (439)
T ss_dssp             HHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-CCEEEEEEHHHHTSCSS--------SSCCTTT-T
T ss_pred             HHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCCc-ceEEEEECHHHHhhhcC--------CCcCCCc-c
Confidence            467999999999999999999999999999999   679999996 99999999999876653        4688999 8


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++++. +.+++   +++++++++++++.|+++...++.+..+++.|+|+++++..+.....| +......+.+.
T Consensus       302 ~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~  380 (439)
T 3dxv_A          302 NPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREP-ARAETAKLIYR  380 (439)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE-CHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC-CHHHHHHHHHH
Confidence            8 999988887 65543   789999999999999999888999999999999999999654322222 22346678899


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+++..++.+|+.||+++   +++|++++++++
T Consensus       381 l~~~Gv~v~~~~~~~~~iRi~~~~~~---t~e~i~~~l~~l  418 (439)
T 3dxv_A          381 AYQLGLVVYYVGMNGNVLEFTPPLTI---TETDIHKALDLL  418 (439)
T ss_dssp             HHHHTEECEEESTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCcEEeecCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            99999999998756699999999988   589999999985

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.89  E-value=2e-22  Score=195.67  Aligned_cols=182  Identities=23%  Similarity=0.289  Sum_probs=150.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||++||||+|.+++++++++.||   ++|++++| +|+|++++++++++.+..   .   ...|++||++
T Consensus       234 ~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G-~~ig~~~~~~~~~~~~~~---~---~~~~~~t~~~  306 (433)
T 1zod_A          234 EARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHE---L---GYLFYTTHVS  306 (433)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHH---T---TCCCCCTTTT
T ss_pred             HHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCC-CCeeEEEEhHHHHHhhcc---C---CCCCCCCCCc
Confidence            467999999999999999999889999999999   67999999 599999999999988763   1   1457789999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|+++++. +.+++   .+++++++++|+++|+++..+++.+..+++.|+|+++++..+...+.+ +......+.+.
T Consensus       307 ~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~  385 (433)
T 1zod_A          307 DPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEP-ADGLGAKITRE  385 (433)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE-CTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC-ChHHHHHHHHH
Confidence            9 999888887 76654   789999999999999998777888888999999999999643211111 11235668888


Q ss_pred             HHHCCceeeccCCCC--CEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSG--NTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~--nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+++..+  +.+||.|+++.   +++|++++++++
T Consensus       386 l~~~Gv~v~~~~~~~~~~~lRi~~~~~~---t~~~i~~~l~~l  425 (433)
T 1zod_A          386 CMNLGLSMNIVQLPGMGGVFRIAPPLTV---SEDEIDLGLSLL  425 (433)
T ss_dssp             HHHTTEECCEECCTTSCCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCCeEeccCCCCCCCEEEEECCcCC---CHHHHHHHHHHH
Confidence            999999998865434  89999999988   589999999985

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.89  E-value=2.6e-22  Score=192.38  Aligned_cols=170  Identities=17%  Similarity=0.227  Sum_probs=148.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccchhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      .+||++||+|||++||||+|.+++++++++.||   ++|++++|+ |+|++++++++ ++.+.+        ..|++||+
T Consensus       210 ~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~-~~G~~~~~~~~~~~~~~~--------~~~~~~~~  280 (395)
T 3nx3_A          210 DEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGL-SVGAFVINQKVASNSLEA--------GDHGSTYG  280 (395)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTS-CCEEEEECHHHHHHHSCT--------TCCSSCBS
T ss_pred             HHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCC-ceEEEEEchhhhhhhcCC--------cccCCCCC
Confidence            467999999999999999999999999999999   679999995 99999999999 776643        56889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++++++++. +.+++   +++++++++++++.|+++..++|.+..+++.|+++++++..+.         ....+.+
T Consensus       281 ~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~  351 (395)
T 3nx3_A          281 GNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSV---------KVAKVIQ  351 (395)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS---------CHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcc---------hHHHHHH
Confidence            99 999998887 66543   7899999999999999998889988999999999999996421         1356888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.+++  .+.+||.||+++   |++|++++++++
T Consensus       352 ~l~~~Gi~v~~~~--~~~iRi~~~~~~---t~e~i~~~l~~l  388 (395)
T 3nx3_A          352 KCQENALLLISCG--ENDLRFLPPLIL---QKEHIDEMSEKL  388 (395)
T ss_dssp             HHHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            8999999999865  689999999998   589999999985

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.88  E-value=2.5e-22  Score=195.97  Aligned_cols=172  Identities=17%  Similarity=0.233  Sum_probs=143.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||++||||+|.+++++.+++.||   ++|++++|+ |+|++++++++++.+..        ..|++||++
T Consensus       232 ~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~sK~l~~G~-~iG~~~~~~~l~~~l~~--------~~~~~t~~~  302 (420)
T 2pb2_A          232 DEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHV--------GSHGSTYGG  302 (420)
T ss_dssp             HHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTCC------------CCEECC
T ss_pred             HHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEecccccCCC-ceEEEEEhHHHHHhhcC--------CCcCcccCc
Confidence            467999999999999999999988999999999   679999995 99999999998876542        358889999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++|+++++. +.+++   .+++++++++|.++|+++...+|.+..+++.|+|+++++..+..       .....+.+.
T Consensus       303 ~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-------~~~~~l~~~  375 (420)
T 2pb2_A          303 NPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYK-------GRARDFLYA  375 (420)
T ss_dssp             CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGT-------TCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCch-------HHHHHHHHH
Confidence            9 999888887 66642   78999999999999999876678888899999999999863210       013568888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++||++.+.+  ++.+||.||+++   +++|++++++++
T Consensus       376 l~~~Gi~v~~~~--~~~iRl~~~~~~---t~eei~~~~~~l  411 (420)
T 2pb2_A          376 GAEAGVMVLNAG--ADVMRFAPSLVV---EEADIHEGMQRF  411 (420)
T ss_dssp             HHHTTEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCCEEEeCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            999999999864  689999999987   589999999985

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.88  E-value=5.5e-22  Score=193.00  Aligned_cols=179  Identities=9%  Similarity=-0.063  Sum_probs=146.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||++|| |+|.+++++++++.||   ++|++++| +|+|++++++++++.+..     .....|++||+
T Consensus       232 ~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~-----~~~~~~~~t~~  304 (434)
T 3l44_A          232 VHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAP-----LGPAYQAGTMA  304 (434)
T ss_dssp             HHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTT-----TSSBCCCCTTT
T ss_pred             HHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhcc-----CCCcccCCCCC
Confidence            34689999999999999 9999999999999999   67999999 599999999999987653     11256899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC-----CCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK-----VPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~-----~p~~~~~~  150 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|+++...++.+..+++.|+|+++++..+....     .+ +....
T Consensus       305 ~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~  383 (434)
T 3l44_A          305 GNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDT-DGEMF  383 (434)
T ss_dssp             TCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHS-CHHHH
T ss_pred             cCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhcccc-CHHHH
Confidence            99 999999988 76643   8899999999999999998888888899999999999996422100     00 12345


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|+++||++.+++  .+.+++  ++++   |++|++++++++
T Consensus       384 ~~~~~~l~~~Gv~v~~~~--~~~~rl--~~~~---t~e~i~~~l~~l  423 (434)
T 3l44_A          384 GKFFKLMLQEGVNLAPSK--YEAWFL--TTEH---TKEDIEYTIEAV  423 (434)
T ss_dssp             HHHHHHHHHTTEECCSST--TCCEEC--CTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCeEEeecC--CCcEEE--eccc---CHHHHHHHHHHH
Confidence            678899999999998864  356665  4554   689999999985

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.79  E-value=4.2e-24  Score=214.28  Aligned_cols=180  Identities=11%  Similarity=-0.000  Sum_probs=146.6

Q ss_pred             CccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           2 DTTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         2 ~~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ++..+||++||+|||+| | |+|.+|+++++|+.||   ++|+++||+ |+|++++++++++.+.+  . ....+.|++|
T Consensus       261 ~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t~sK~lg~G~-piG~v~~~~~i~~~l~~--~-~~g~~~~~~T  334 (465)
T 2yky_A          261 AEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTTLGKYIGGGM-SFGAFGGRRDLMERFDP--A-RDGAFAHAGT  334 (465)
Confidence            34567899999999999 6 9999999999999999   679999995 99999999999988763  0 0012468899


Q ss_pred             hhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC-----CCCCCChH
Q psy7882          79 ISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE-----TKVPLNSR  148 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~-----~~~p~~~~  148 (329)
                      |++| ++|++++++ +++++   ++++++++++|+++|+++.++++.+.+|||.|+|++|+|..++.     .+.+ +.+
T Consensus       335 ~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~-d~~  413 (465)
T 2yky_A          335 FNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAA-DQQ  413 (465)
Confidence            9999 999999998 87754   78999999999999999988888889999999999999974211     0001 123


Q ss_pred             HHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|+++||++.+++. + .    ||+++   |++|||++++++
T Consensus       414 ~~~~~~~~ll~~GV~v~p~~~-~-~----~s~~~---t~edid~~l~~l  453 (465)
T 2yky_A          414 LKELFFFHMLRKGIYLAPRGM-Y-A----LSLEI---ADAGRDAFAEAL  453 (465)
Confidence            456789999999999998652 2 1    77765   689999999986

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.87  E-value=8.5e-22  Score=192.74  Aligned_cols=182  Identities=15%  Similarity=0.089  Sum_probs=145.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhh-ccCCCCccchhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKY-QILKTPAHKLKIS   80 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~-~~~~~~~hg~T~a   80 (329)
                      .+||++||+|||+|||||+|.+++++++++.||   ++|+++||++|+|++++++++++.+..... .....+.|++||+
T Consensus       250 ~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~  329 (449)
T 3a8u_X          250 NQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYS  329 (449)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTT
T ss_pred             HHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCc
Confidence            457999999999999999999889999999999   579999997799999999999988763000 0001236888999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|+++++. +.+++   .+++++++++++++|+++ .+++.+..+++.|+|+++++..+....    ......+..
T Consensus       330 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~----~~~~~~~~~  404 (449)
T 3a8u_X          330 AHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI-KGAKNVIDIRNFGLAGAIQIAPRDGDA----IVRPFEAGM  404 (449)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-TTSTTEEEEEEETTEEEEEECCBTTBS----SHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-hcCCCeEEEeeeEEEEEEEEecCcccc----cccHHHHHH
Confidence            99 999888887 76654   789999999999999884 457878889999999999996432110    001235888


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.+.+   +.+||.||+++   +++|++++++++
T Consensus       405 ~l~~~Gv~v~~~g---~~iRis~~~~~---t~~~i~~~l~~l  440 (449)
T 3a8u_X          405 ALWKAGFYVRFGG---DTLQFGPTFNS---KPQDLDRLFDAV  440 (449)
T ss_dssp             HHHHHTEECEEET---TEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHCCcEEecCC---CEEEEECCCcC---CHHHHHHHHHHH
Confidence            8889999999853   89999999988   589999999985

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.86  E-value=5.3e-22  Score=197.72  Aligned_cols=165  Identities=16%  Similarity=0.262  Sum_probs=137.1

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCc--ch---HHHh-hcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC--RF---VQKD-FKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~--PD---i~Ka-LgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+||++||+|||||||||+|.+|+++++|+.  ||   ++|+ ++||+ ++     ++++. .+        ....|++
T Consensus       288 ~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~-~~-----~~~~~-~~--------~~~~~~~  352 (472)
T 1ohv_A          288 SRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGF-FH-----KEEFR-PN--------APYRIFN  352 (472)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEE-EE-----CGGGS-CS--------SSSSSCC
T ss_pred             HHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCc-cC-----chhhc-cc--------ccccccC
Confidence            34689999999999999999999999999997  99   6899 78886 42     44442 11        1357889


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      ||++| ++|++++++ +++++   .+++++++++|+++|+++..++| .+..++|.|+|+++++..         .....
T Consensus       353 T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~---------~~~~~  423 (472)
T 1ohv_A          353 TWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPD---------ESIRN  423 (472)
T ss_dssp             SSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSS---------HHHHH
T ss_pred             ccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCC---------hhHHH
Confidence            99999 999999888 77654   78999999999999999877888 488899999999998742         12356


Q ss_pred             HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+...|+++||++.+++  .++|||.||+++   |++|||++++++
T Consensus       424 ~~~~~l~~~Gv~~~~~g--~~~iRi~~~~~~---t~e~i~~~~~~l  464 (472)
T 1ohv_A          424 KLISIARNKGVMLGGCG--DKSIRFRPTLVF---RDHHAHLFLNIF  464 (472)
T ss_dssp             HHHHHHHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            78899999999998864  589999999998   589999999985

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.86  E-value=1.3e-21  Score=192.89  Aligned_cols=172  Identities=17%  Similarity=0.169  Sum_probs=143.4

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+||||+||||+|.+|+++++++.||   ++|++     |+|++++++++++.+.+   .......|++||+
T Consensus       261 ~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~~~~~~l~~---~~~~~~~~~~t~~  332 (449)
T 2cjg_A          261 CDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGRRVDEVADN---VFAVPSRLNSTWG  332 (449)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECGGGGGSTTC---TTTSTTSSCCSSS
T ss_pred             HHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECHHHhhhhhh---cccCCcccccCCC
Confidence            3568999999999999999999999999999999   57887     99999999998875321   0011246889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +| ++|+++++. +.+++   .+++++++++|+++|+++..+++. +..+++.|+|+++++..         ......+.
T Consensus       333 ~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~  403 (449)
T 2cjg_A          333 GNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPT---------TADRDELI  403 (449)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSS---------HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEECC---------hHHHHHHH
Confidence            99 999998887 76643   789999999999999999878886 88999999999998852         12345688


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.++|  .+.+|+.||+++   +++||+++++++
T Consensus       404 ~~l~~~Gv~v~~~g--~~~iRi~~~~~~---t~e~i~~~l~~l  441 (449)
T 2cjg_A          404 RQLWQRAVIVLPAG--ADTVRFRPPLTV---STAEIDAAIAAV  441 (449)
T ss_dssp             HHHHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHCCeEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            88999999999875  589999999988   589999999985

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.86  E-value=3e-21  Score=187.81  Aligned_cols=178  Identities=10%  Similarity=-0.000  Sum_probs=143.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||++|| |+|.+++++++++.||   ++|++++|+ |+|++++++++++.+..  .   ....|++||++
T Consensus       231 ~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G~-~~G~~~~~~~~~~~l~~--~---~~~~~~~t~~~  303 (429)
T 4e77_A          231 DEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGGM-PVGAFGGRREVMNALAP--T---GPVYQAGTLSG  303 (429)
T ss_dssp             HHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTTS-CCEEEEECHHHHTTBTT--T---SSBCC--CCCC
T ss_pred             HHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCCC-CeEEEEECHHHHHHhcc--C---CCccccCCCCC
Confidence            4679999999999999 9999999999999999   679999994 99999999999987753  1   12468999999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC------ChHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL------NSRHM  150 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~------~~~~~  150 (329)
                      | ++|+++++. +.+++   ++++++++++++++|+++..+++.+..++|.|+|+++++..+.. ..++      +....
T Consensus       304 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~  382 (429)
T 4e77_A          304 NPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADT-VTCYQDVMNCDVERF  382 (429)
T ss_dssp             CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSC-CCSHHHHHTSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcc-cccccccccccHHHH
Confidence            9 999999988 76643   88999999999999999988899889999999999999965321 1111      12345


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|+++||++.+++.  ..+  .+++++   |++|++++++++
T Consensus       383 ~~~~~~l~~~Gi~v~~~~~--~~~--~~~~~~---t~e~i~~~l~~l  422 (429)
T 4e77_A          383 KRFFHLMLEEGVYLAPSAF--EAG--FMSLAH---SNEDIQKTVNAA  422 (429)
T ss_dssp             HHHHHHHHHTTEECCSSTT--SCE--ECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCeEEeecCC--CCE--EEeccC---CHHHHHHHHHHH
Confidence            6788999999999998652  333  345655   689999999985

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.85  E-value=2.4e-21  Score=188.78  Aligned_cols=179  Identities=14%  Similarity=0.064  Sum_probs=145.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||++|| |+|.+++++++++.||   ++|++++| +|+|++++++++++.+..     .....|++||+
T Consensus       230 ~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~-----~~~~~~~~t~~  302 (429)
T 3k28_A          230 TEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAP-----SGPIYQAGTLS  302 (429)
T ss_dssp             HHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTT-----TSSBCCCCTTT
T ss_pred             HHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhcc-----CCCccccCCCC
Confidence            34679999999999999 9999999999999999   67999998 599999999999987652     11246889999


Q ss_pred             cc-HHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHMT  151 (329)
Q Consensus        81 gn-lA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~~  151 (329)
                      +| ++|+++++. +.+++  ++++++.+++++++|+++..+++.+..+++.|+|+++++..+...     ..+ +.....
T Consensus       303 ~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~  381 (429)
T 3k28_A          303 GNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSS-NLQFFA  381 (429)
T ss_dssp             TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTS-CHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccc-cHHHHH
Confidence            99 999999887 55434  889999999999999999888999999999999999999643211     001 223457


Q ss_pred             HHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.|+++||++.+++  .+.+++  ++++   |++|++++++++
T Consensus       382 ~~~~~l~~~Gv~v~~~~--~~~~r~--~~~~---t~e~i~~~l~~l  420 (429)
T 3k28_A          382 AYYREMVEQGVFLPPSQ--FEGLFL--STVH---SDADIEATIAAA  420 (429)
T ss_dssp             HHHHHHHHTTEECCSST--TSCBCC--CTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEecCC--CCCEEE--ECCC---CHHHHHHHHHHH
Confidence            78899999999998864  345554  4554   689999999985

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.85  E-value=4.8e-21  Score=186.63  Aligned_cols=179  Identities=8%  Similarity=0.018  Sum_probs=143.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||++|| |+|.+++++++|+.||   ++|++++| +|+|++++++++++.+..  ..   ...|++||+
T Consensus       233 ~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~--~~---~~~~~~t~~  305 (434)
T 2epj_A          233 SRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTP--QG---KVFNAGTFN  305 (434)
T ss_dssp             HHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTT--TS---SBCCCCTTT
T ss_pred             HHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhcCC-cceeeeeecHHHHHhhcc--CC---CcccCCCCC
Confidence            34679999999999999 8999899999999999   57999999 599999999999987652  11   235889999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~  150 (329)
                      +| ++|+++++. +.+++   .+++++++++|+++|+++..+++.+..++|.|+|+++++..++..     +.+ +....
T Consensus       306 ~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~~~~~  384 (434)
T 2epj_A          306 AHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKA-DKKFY  384 (434)
T ss_dssp             TCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTS-CHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhcccc-CHHHH
Confidence            99 999998888 76654   789999999999999998777787778999999999999642110     000 11245


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|+++||++.+++.  .  ++.+|+++   +++|++++++++
T Consensus       385 ~~~~~~l~~~Gv~v~~~~~--~--~~~~~~~~---t~e~i~~~l~~l  424 (434)
T 2epj_A          385 VKLHEEMLRRGVFIAPSNL--E--AVFTGLPH---QGEALEIAVEGL  424 (434)
T ss_dssp             HHHHHHHHHTTEECCSSTT--S--CEECCTTC---SHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCeEEeccCC--C--cEEEeccC---CHHHHHHHHHHH
Confidence            6788999999999988652  2  24567665   689999999986

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.85  E-value=8.1e-21  Score=184.36  Aligned_cols=179  Identities=12%  Similarity=0.007  Sum_probs=146.7

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||++|| |+|.+++++++++.||   ++|++++|+ |+|++++++++++.+..  .   ....|++||+
T Consensus       229 ~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~~G~~~~~~~~~~~~~~--~---~~~~~~~t~~  301 (427)
T 3fq8_A          229 TLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGGL-PVGAYGGKREIMQLVAP--A---GPMYQAGTLS  301 (427)
T ss_dssp             HHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGGTTS-SCEEEEECHHHHTTBTT--T---SSBCCCCTTT
T ss_pred             HHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhhCCc-ceEEEEEcHHHHHhhcc--C---CCccccCCCC
Confidence            34689999999999999 9999999999999999   679999995 99999999999987753  1   2357899999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM  150 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~  150 (329)
                      +| ++|+++++. +.+++   ++++++++++++++|+++..+++.+..++|.|+|+++++..++..     ..+ +....
T Consensus       302 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~  380 (427)
T 3fq8_A          302 GNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKS-DLQKF  380 (427)
T ss_dssp             TCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTS-CHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccc-cHHHH
Confidence            99 999999888 76643   789999999999999999888888889999999999999643211     001 12345


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|+++||++.+++.  .  ++.+++++   +++|++++++++
T Consensus       381 ~~l~~~l~~~Gi~v~~~~~--~--r~~~~~~~---t~e~i~~~l~~l  420 (427)
T 3fq8_A          381 SRFHRGMLEQGIYLAPSQF--E--AGFTSLAH---TEEDIDATLAAA  420 (427)
T ss_dssp             HHHHHHHHHTTEECCSSTT--S--CEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCcEEecCCC--C--CEEeeCcC---CHHHHHHHHHHH
Confidence            6788999999999988652  2  46677776   689999999985

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.85  E-value=8.7e-21  Score=184.26  Aligned_cols=178  Identities=12%  Similarity=0.042  Sum_probs=142.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||++|| |+|.+++++++|+.||   ++|++++| +|+|++++++++++.+..  ..   ...|++||++
T Consensus       229 ~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~--~~---~~~~~~t~~~  301 (424)
T 2e7u_A          229 KAYGVLLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAP--LG---PVYQAGTLSG  301 (424)
T ss_dssp             GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTT--TS---SBCCCCTTCS
T ss_pred             HHcCCEEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhcc--cC---CcccCCCCCC
Confidence            5789999999999999 8999899999999999   67999999 599999999999987652  11   2458899999


Q ss_pred             c-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC-----CCCCChHHH
Q psy7882          82 T-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET-----KVPLNSRHM  150 (329)
Q Consensus        82 n-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~-----~~p~~~~~~  150 (329)
                      | ++|+++++. +.++   + .+++++++++++++|+++..+++.+..+++.|+|+++++...+..     +.+ +....
T Consensus       302 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~~~~~  380 (424)
T 2e7u_A          302 NPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRT-DTELF  380 (424)
T ss_dssp             CHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTS-CHHHH
T ss_pred             CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhccc-CHHHH
Confidence            9 999988887 6653   2 789999999999999999888887778999999999999642100     000 12345


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|+++||++.+++.  ..  +.+++++   +++|++++++++
T Consensus       381 ~~~~~~l~~~Gv~v~~~~~--~~--~~~~~~~---t~~~i~~~l~~l  420 (424)
T 2e7u_A          381 KRFFHGLLDRGIYWPPSNF--EA--AFLSVAH---REEDVEKTLEAL  420 (424)
T ss_dssp             HHHHHHHHTTTEECCSSSS--SC--EECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCeEEeccCC--Cc--eEeeccC---CHHHHHHHHHHH
Confidence            6788999999999988652  22  4566665   689999999875

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.83  E-value=5.8e-20  Score=178.45  Aligned_cols=174  Identities=15%  Similarity=0.110  Sum_probs=141.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+||||+||||+|.+++++++++.||   ++|+++||++|+|++++++++++.+..   .....+.|++||++
T Consensus       236 ~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~---~~~~~~~~~~t~~~  312 (429)
T 1s0a_A          236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISN---GEAGCFMHGPTFMG  312 (429)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHT---STTSSCSCCCTTTT
T ss_pred             HHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCccceEEEeCHHHHHHhhc---CCCcccccCCCCCC
Confidence            457999999999999999998888999999999   579999996699999999999887753   10112347889999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      | ++++++++. +.+++   .+++++++++|.++|+++.. +|.+..+++.|.++.+++...      .+   ...+...
T Consensus       313 n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~~~~~g~~~~~~~~~~------~~---~~~l~~~  382 (429)
T 1s0a_A          313 NPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGVVETTHP------VN---MAALQKF  382 (429)
T ss_dssp             CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-CTTEEEEEEETTEEEEEESSC------BC---HHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEeeEEEEEEECCc------cc---HHHHHHH
Confidence            9 888888877 66543   78899999999999988743 677778899999999998531      11   3457888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+.   ++.+|+.||++.   +++|++++++++
T Consensus       383 l~~~Gi~v~~~---~~~iRis~~~~~---t~e~i~~~~~~l  417 (429)
T 1s0a_A          383 FVEQGVWIRPF---GKLIYLMPPYII---LPQQLQRLTAAV  417 (429)
T ss_dssp             HHHTTEECCCB---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCCEEecc---CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            88999999875   479999999988   589999999975

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.83  E-value=3.3e-20  Score=181.94  Aligned_cols=200  Identities=11%  Similarity=0.021  Sum_probs=142.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||++||+|||++|| |+|.+++++++|+.||   ++|++++|+ |+|++++++++++.+..   .......|++||+
T Consensus       231 ~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~v~~~~~~~~~l~~---~~~~~~~~~~t~~  305 (453)
T 2cy8_A          231 ARQYGALFILDEVISGF-RVGNHGMQALLDVQPDLTCLAKASAGGL-PGGILGGREDVMGVLSR---GSDRKVLHQGTFT  305 (453)
T ss_dssp             HHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTSSS---CC---------CC
T ss_pred             HHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcEEEEChhhhCCc-ceEEEechHHHHHHhcc---ccCCCceeCCCCC
Confidence            35689999999999999 9999899999999999   579999995 99999999999887642   0001135788999


Q ss_pred             cc-HHHHHHHHh-hH-H-hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec-----CC------CCCCC
Q psy7882          81 DT-VRPHVQIKK-SV-L-ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ-----DK------ETKVP  144 (329)
Q Consensus        81 gn-lA~aaala~-~i-l-e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~-----d~------~~~~p  144 (329)
                      +| ++|+++++. +. + ++ .+++++++++|+++|+++..+++.+..+++.|+|+++++..     +.      ....+
T Consensus       306 ~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  385 (453)
T 2cy8_A          306 GNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARP  385 (453)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCC
T ss_pred             CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccc
Confidence            99 999998888 66 4 33 78999999999999999877788777899999999999963     10      00000


Q ss_pred             CChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh--hhhhhhhcccCCch
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY--AGSINKLTGKNSSN  219 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~--~~~~~~~~~~~~~~  219 (329)
                       +......+...|+++||++.+.   + .+  .+++++   +++|++++++++. ..+.++  .|.+|....+++.|
T Consensus       386 -~~~~~~~l~~~l~~~Gv~v~~~---~-~~--~l~~~~---t~~~i~~~l~~l~-~~l~~~~~~~~~~~~~~~~~~~  451 (453)
T 2cy8_A          386 -DVKMIAAMRMALILEGVDIGGR---G-SV--FLSAQH---EREHVEHLVTTFD-RVLDRLADENLLSWQGTNLSGN  451 (453)
T ss_dssp             -CHHHHHHHHHHHHHTTEECBTT---T-EE--ECCTTC---CHHHHHHHHHHHH-HHHHHHHHTTCCCCCC------
T ss_pred             -cHHHHHHHHHHHHHCCeEEeCC---C-CE--EeeccC---CHHHHHHHHHHHH-HHHHHHHhCCCccccccccCCC
Confidence             1223567888999999999642   2 23  456655   6899999999752 122222  37788777777654

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.82  E-value=4.1e-20  Score=179.71  Aligned_cols=163  Identities=18%  Similarity=0.219  Sum_probs=132.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||++||+|||++||||+|.+++++++++.||   ++|++++|++|+|+++++++++ .+ .        ..|++||++
T Consensus       243 ~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~--------~~~~~t~~~  312 (419)
T 2eo5_A          243 KKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD-FK-P--------GMHSNTFGG  312 (419)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC---------------CCCC
T ss_pred             HHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEEEEchHhh-cC-C--------cccCCCCCC
Confidence            457999999999999999999888899999999   6799999956999999999887 55 3        357789999


Q ss_pred             c-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK  158 (329)
Q Consensus        82 n-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~  158 (329)
                      | ++++++++. +.+++ .+++++++++|.++|+++      +..+++.|+|+.+++.++        ..... +...|+
T Consensus       313 n~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~g~~~~i~~~~~--------~~~~~-~~~~l~  377 (419)
T 2eo5_A          313 NALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL------ADDVRGIGLAWGLEYNEK--------KVRDR-IIGESF  377 (419)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------SSEEEEETTEEEEECSCH--------HHHHH-HHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhheEeeeEEEEEEEecC--------ccHHH-HHHHHH
Confidence            9 888888877 66555 678889999998888665      567899999999988421        12245 888889


Q ss_pred             HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         159 EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       159 e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++||++.+++  .+.+||.|+++.   +++|++++++++
T Consensus       378 ~~Gv~v~~~~--~~~lRis~~~~~---t~e~i~~~l~~l  411 (419)
T 2eo5_A          378 KRGLLLLPAG--RSAIRVIPPLVI---SEEEAKQGLDIL  411 (419)
T ss_dssp             HTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            9999999865  589999999988   589999999985

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.80  E-value=8.4e-19  Score=169.02  Aligned_cols=180  Identities=20%  Similarity=0.279  Sum_probs=144.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||+++|+||+++||+++|.+++++.+++.||   ++|++++| +|+|++++++++++.+..        ..+..|+++
T Consensus       230 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G-lriG~~~~~~~~~~~l~~--------~~~~~~~~~  300 (426)
T 1sff_A          230 DEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAP--------GGLGGTYAG  300 (426)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCT--------TSBCCSSSS
T ss_pred             HHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCC-CceEEEEEcHHHHhhhcc--------CCcCcCCCC
Confidence            457999999999999999998888899999999   67999998 599999999998876542        346788888


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++.+. +.+++   .+++++++++++++|+++...++.+..+++.|.++.+++......+.| +......+...
T Consensus       301 ~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~l~~~  379 (426)
T 1sff_A          301 NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP-DAKLTAEIVAR  379 (426)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSB-CHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC-ChHHHHHHHHH
Confidence            8 888887766 65543   788999999999999998666787778899999999999532111111 11235668888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+++...+.+|+.|++..   +++|++++++++
T Consensus       380 l~~~gi~v~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  417 (426)
T 1sff_A          380 ARDKGLILLSCGPYYNVLRILVPLTI---EDAQIRQGLEII  417 (426)
T ss_dssp             HHHTTEECEEESTTSCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCcEEecCCCCCCEEEEECCccC---CHHHHHHHHHHH
Confidence            99999999986544689999999877   589999999985

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.79  E-value=1e-18  Score=167.10  Aligned_cols=172  Identities=16%  Similarity=0.221  Sum_probs=145.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..||+++|+||+++|||++|..++++.+++.||   ++|++++| +|+|++++++++++.+..        ..|++||+.
T Consensus       214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~  284 (406)
T 4adb_A          214 NRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGG-FPVGALLATEECARVMTV--------GTHGTTYGG  284 (406)
T ss_dssp             HHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHHTCCT--------TSSCCSSTT
T ss_pred             HHcCCEEEEeccccCCCccchhHHHHhcCCCCCEEEechhhcCC-CCeEEEEEcHHHHhhhcc--------CCcCCCCCC
Confidence            467999999999999999999999999999999   57999998 599999999999877653        467889999


Q ss_pred             c-HHHHHHHHh-hHHh--H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLE--R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile--~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++++. +.++  + .++++++.+++.+.|+++...++.+.++++.|+++++++..+..       .....+.+.
T Consensus       285 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~  357 (406)
T 4adb_A          285 NPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA-------GQAKQISQE  357 (406)
T ss_dssp             CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT-------TCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH-------HHHHHHHHH
Confidence            9 888888776 5553  2 78899999999999999877778888999999999999964210       124568889


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+.+  .+.+|+.|++..   +++|++++++++
T Consensus       358 l~~~gi~v~~~~--~~~iRi~~~~~~---~~e~i~~~~~~l  393 (406)
T 4adb_A          358 AAKAGVMVLIAG--GNVVRFAPALNV---SEEEVTTGLDRF  393 (406)
T ss_dssp             HHHTTEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCcEEeecC--CCeEEEECCCCC---CHHHHHHHHHHH
Confidence            999999999864  689999999887   589999999985

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.77  E-value=1.9e-18  Score=165.10  Aligned_cols=167  Identities=19%  Similarity=0.247  Sum_probs=138.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..||+++|+||+++|||++|..++++.+++.||   ++|+|+||++|+|++++++++++.+..        ..+++||+.
T Consensus       213 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~--------~~~~~~~~~  284 (392)
T 3ruy_A          213 KKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP--------GSHGSTFGG  284 (392)
T ss_dssp             HTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCT--------TSSCCSSTT
T ss_pred             HHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhcc--------CCcCCCCCC
Confidence            467999999999999999999999999999999   679999996799999999998876642        467888999


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++.+. +.+++   .++++++.++|.+.|+++  .++.+..+++.|.++.+.+.. .          ...+.+.
T Consensus       285 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~g~~~~~~~~~-~----------~~~l~~~  351 (392)
T 3ruy_A          285 NPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI--DNPMITEVRGKGLFIGIELNE-P----------ARPYCEQ  351 (392)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC--CCTTEEEEEEETTEEEEEESS-C----------SHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh--cCCCceEEEeeeeEEEEEEcc-h----------HHHHHHH
Confidence            9 888877776 55532   778889999999988765  236678899999999999743 1          2357888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+++  .+.+|+.||+..   +++|++++++++
T Consensus       352 l~~~gi~v~~~~--~~~iRi~~~~~~---~~~~i~~~~~~l  387 (392)
T 3ruy_A          352 LKAAGLLCKETH--ENVIRIAPPLVI---SEEDLEWAFQKI  387 (392)
T ss_dssp             HHTTTEECCCBT--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCcEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            899999998864  689999999987   589999999875

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.72  E-value=3.6e-17  Score=156.68  Aligned_cols=169  Identities=22%  Similarity=0.305  Sum_probs=136.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+||+++|+||+++||+++|..++++.+++.||   ++|++++|+ ++|+++++++++ .+..        ..++.||+.
T Consensus       214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~-r~G~~~~~~~~~-~l~~--------~~~~~~~~~  283 (397)
T 2ord_A          214 DEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTTAKGLGGGV-PIGAVIVNERAN-VLEP--------GDHGTTFGG  283 (397)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECSTTC-CCCT--------TSSCCSSTT
T ss_pred             HHcCCEEEEEecccCCccCccchhhhhhCCCCCeeeeccccCCCc-CeEEEEEchHhc-ccCC--------CCcCCCCCC
Confidence            457999999999999999998777888899999   579999995 999999998876 4431        346778888


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++.+. +.+++   .++++++.++|.+.|+++...++.+..+++.|.++.+++..+.         ....+.+.
T Consensus       284 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~l~~~  354 (397)
T 2ord_A          284 NPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV---------SNREVATK  354 (397)
T ss_dssp             CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS---------CHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH---------HHHHHHHH
Confidence            8 777777666 55532   7889999999999999875567777778999999999885321         13458888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+.+  .+.+|+.||+..   +++|++++++++
T Consensus       355 l~~~gi~v~~~~--~~~iRis~~~~~---~~e~i~~~~~~l  390 (397)
T 2ord_A          355 CFENKLLVVPAG--NNTIRFLPPLTV---EYGEIDLAVETL  390 (397)
T ss_dssp             HHHTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHCCCEEccCC--CCEEEEECCcCC---CHHHHHHHHHHH
Confidence            999999999864  679999999876   589999999975

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.61  E-value=2.5e-15  Score=143.50  Aligned_cols=166  Identities=17%  Similarity=0.274  Sum_probs=131.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..||+++|+||+++||+++|..++++.+++.||   ++|.+++| +++|++++++++++.+..        ..++.|++.
T Consensus       216 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~--------~~~~~~~~~  286 (395)
T 1vef_A          216 QEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMPK--------GGHGTTFGG  286 (395)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSCT--------TSSCCSSTT
T ss_pred             HHcCCEEEEEecccCCccCCchhHhhhcCCCCCEEEEcccccCC-CceEEEEehHHHHhhhcc--------CCcCCCcCC
Confidence            357999999999999999998877888899999   57999998 599999999988766542        236678888


Q ss_pred             c-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        82 n-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      + ++++++.+. +.+++   .++++++.+++.+.|+++.  .+.+..+++.|.++.+++..+           ...+.+.
T Consensus       287 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~g~~~~~~~~~~-----------~~~l~~~  353 (395)
T 1vef_A          287 NPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP--SPKIREVRGMGLMVGLELKEK-----------AAPYIAR  353 (395)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC--CTTEEEEEEETTEEEEEESSC-----------SHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh--cCceEEEEEEEEEEEEEEcCh-----------HHHHHHH
Confidence            8 777766665 54432   6788899999998887752  244556788999999988531           2347788


Q ss_pred             HH-HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CK-EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~-e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |. ++||++.+.+  .+.+|+.|++..   +++|++++++++
T Consensus       354 l~~~~gi~v~~~~--~~~iRi~~~~~~---~~~~i~~~~~~l  390 (395)
T 1vef_A          354 LEKEHRVLALQAG--PTVIRFLPPLVI---EKEDLERVVEAV  390 (395)
T ss_dssp             HHHHHCEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHCCeEEecCC--CCEEEEeCCCCC---CHHHHHHHHHHH
Confidence            88 8999998853  689999998876   589999999875

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.58  E-value=1.8e-14  Score=136.15  Aligned_cols=163  Identities=20%  Similarity=0.336  Sum_probs=127.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      ..||+++|+||+++|||++|..++.+.+|+.||   ++|.+++| +++|++++++++++.+..        ..++.|++.
T Consensus       203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~--------~~~~~~~~~  273 (375)
T 2eh6_A          203 KEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSFTP--------GSHGSTFGG  273 (375)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTTCCT--------TSCCCSSTT
T ss_pred             HHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEcccccCC-CCeEEEEEcHHHHhhhcC--------CCCCCCCCC
Confidence            357999999999999999987677888898999   57999998 499999999988765542        235677777


Q ss_pred             c-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK  158 (329)
Q Consensus        82 n-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~  158 (329)
                      + ++++++.+. +.+++ .++++++.++|.+.|+++    +. ..+++.|.++.+++..+           ...+.+.|.
T Consensus       274 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~g~~~~~~~~~~-----------~~~~~~~l~  337 (375)
T 2eh6_A          274 NPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKEL----GK-GKVKGRGLMLGLELERE-----------CKDYVLKAL  337 (375)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TS-SEEEEETTEEEEECSSC-----------CHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hc-CCceEEEEEEEEEEcCc-----------HHHHHHHHH
Confidence            7 777766655 44433 677888888888888764    22 45678899999988531           134778888


Q ss_pred             HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         159 EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       159 e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++||++.+.+  .+.+|+.|++..   +++|++++++++
T Consensus       338 ~~gi~~~~~~--~~~iRi~~~~~~---~~~~i~~~~~~l  371 (375)
T 2eh6_A          338 EKGLLINCTA--GKVLRFLPPLII---QKEHIDRAISVL  371 (375)
T ss_dssp             HTTEECEEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHH
Confidence            9999998753  689999999776   589999999875

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.44  E-value=3.5e-13  Score=130.48  Aligned_cols=167  Identities=8%  Similarity=-0.032  Sum_probs=112.9

Q ss_pred             ccccceEEehhHhhchhccchhh----hh--cccCCcch---HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL----GF--QCLQICRF---VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f----A~--e~~GV~PD---i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~   73 (329)
                      .+||++||+|||++||+++|..+    ..  +..++.++   ++|+++ +| +|+|+++++ +++++.+..        .
T Consensus       224 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~--------~  294 (421)
T 3l8a_A          224 KKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQY--------R  294 (421)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHH--------H
T ss_pred             HHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHH--------H
Confidence            46799999999999999988421    21  22455566   579998 77 599999998 889888764        2


Q ss_pred             c-cchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCC
Q psy7882          74 A-HKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVP  144 (329)
Q Consensus        74 ~-hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p  144 (329)
                      . +.+++++| ++++++.+. +.    +++ .++++++.++|.+.|++    +|.+..+++.|.++. +++.....    
T Consensus       295 ~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~i~~~~~~~~~~~~v~~~~~~~----  366 (421)
T 3l8a_A          295 QLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEA----KTKIKVMEPEGTYLVWLDFSAYAI----  366 (421)
T ss_dssp             HHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HCSCEEECCSBSSEEEEECGGGTC----
T ss_pred             HHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceEeCCCeeEEEEEeccccCC----
Confidence            2 22445677 777666555 32    222 34445555555555544    366777888898887 88853110    


Q ss_pred             CChHHHHHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       +   ...+.+.|++ +||++.++.    ...+.+||.++  +   ++++|+++++++
T Consensus       367 -~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~---~~~~i~~~l~~l  415 (421)
T 3l8a_A          367 -A---QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--T---PKNTVQEALSRI  415 (421)
T ss_dssp             -C---TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred             -C---HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence             0   1347777875 599998732    23589999988  2   579999999875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.31  E-value=6.3e-12  Score=120.82  Aligned_cols=163  Identities=15%  Similarity=0.060  Sum_probs=117.5

Q ss_pred             ccccceEEehhHhhc--hhccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFG--SGDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTG--fGRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .+||++||+||++++  +|++|..+. +.+++.  ||     ++|++++|   .|++++++++++.+..        ..+
T Consensus       213 ~~~~~~li~De~~~~g~~g~~g~~~~-~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~--------~~~  280 (409)
T 3kki_A          213 KEFGCALLVDESHSLGTHGPNGAGLL-AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPF--------ISY  280 (409)
T ss_dssp             HHHTCEEEEECTTTTTTSSGGGCCHH-HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHH--------HCH
T ss_pred             HHcCCEEEEECCccccccCCCCCcch-hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHH--------hCc
Confidence            467999999999999  999987665 677874  55     36999876   4888999998877653        122


Q ss_pred             chhhh--cc-HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          76 KLKIS--DT-VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        76 g~T~a--gn-lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      +.+|+  .+ ++++++++. +.+++    .++++++.++|.+.|+++  .+    .+.+.|.++.+.+..         .
T Consensus       281 ~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~----~~~~~~~~~~~~~~~---------~  345 (409)
T 3kki_A          281 PAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL--GL----TIRSESQIIGLETGD---------E  345 (409)
T ss_dssp             HHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT--TC----CCCCSSSEEEEEEES---------H
T ss_pred             CccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CC----ccCCCCCEEEEEeCC---------H
Confidence            22233  34 666666666 55532    567788888888888765  22    234688899988853         1


Q ss_pred             HHHHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+.+.|.++||++.+..     ...+.+||.|+...   +++||+++++++
T Consensus       346 ~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~---t~e~i~~~~~~l  397 (409)
T 3kki_A          346 RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDV---NDEQIAKIIEVC  397 (409)
T ss_dssp             HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCC---CHHHHHHHHHHH
Confidence            234568889999999986532     13579999999866   589999999985

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.22  E-value=7.8e-11  Score=113.65  Aligned_cols=175  Identities=10%  Similarity=-0.053  Sum_probs=108.6

Q ss_pred             ccccceEEehhHhhchhccch----hhhhc-ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQ-CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e-~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++++|+++|.    +.... .++..++   ++|.++ +| +++|++++++++++.+..        ..+
T Consensus       212 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~  282 (429)
T 1yiz_A          212 KKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQM--------VHQ  282 (429)
T ss_dssp             HHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHH--------HHH
T ss_pred             HHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHH--------HHh
Confidence            357999999999999988764    22221 2344444   689998 67 599999999999887763        233


Q ss_pred             chhhhcc-HHHHHHHHh-hH-----H--hH-HHH----HHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          76 KLKISDT-VRPHVQIKK-SV-----L--ER-FVH----TYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~i-----l--e~-le~----v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                      ..+|+.+ ++++++.+. +.     .  ++ +++    .+++.++|.+.|+++    +........|+++.+++......
T Consensus       283 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~~  358 (429)
T 1yiz_A          283 NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV----GMNPTVPQGGYFMVADWSSLDSK  358 (429)
T ss_dssp             TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH----TCEEEECSBSSEEEEECCSSCTT
T ss_pred             hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCcceEEEEEccccccc
Confidence            4567777 666555554 43     2  22 333    444555555555443    33222223477888888532100


Q ss_pred             CC-C-C-ChHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KV-P-L-NSRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~-p-~-~~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .. + . .......+.+.|. ++||++.++..         ..+.+|+.++.     ++++|+++++++
T Consensus       359 ~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-----~~e~i~~~l~~l  422 (429)
T 1yiz_A          359 VDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-----KDENLQKAAEIL  422 (429)
T ss_dssp             TTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             ccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence            00 0 0 0012345777776 79999987421         15799999872     589999999875

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.17  E-value=1.2e-10  Score=113.23  Aligned_cols=169  Identities=12%  Similarity=-0.009  Sum_probs=117.4

Q ss_pred             cccccceEEehhHhhch--hccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           4 TYYRDCGVVVSAVDFGS--GDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGf--GRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..+||++||+||+++++  +++|.. ..+++++.||       ++|+++   .|.|++++++++++.+..  ..    ..
T Consensus       220 ~~~~g~~li~Dea~~~~~~~~~g~~-~~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~--~~----~~  289 (427)
T 2w8t_A          220 AKKHGAMVLVDEAHSMGFFGPNGRG-VYEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRL--AC----RP  289 (427)
T ss_dssp             HHHTTCEEEEECTTTTTTSSTTSCC-HHHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGG--TC----HH
T ss_pred             HHHcCCEEEEECCccccccCCCCCc-hHhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHH--hc----cc
Confidence            34679999999999984  455554 5677888776       369995   377999999999887753  00    01


Q ss_pred             cchhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          75 HKLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +..|++.+ ++++++++. +.++   + .+++++++++|.+.|+++  ..+..... +.|.++.+.+..         ..
T Consensus       290 ~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~-~~~~~~~~~~~~---------~~  357 (427)
T 2w8t_A          290 YIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM--GFRLGTET-CDSAIVAVMLED---------QE  357 (427)
T ss_dssp             HHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH--TCEESCSS-CCSSEEEEEESS---------HH
T ss_pred             ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCcccCCC-CCCCEEEEEECC---------HH
Confidence            11234556 666666555 5442   3 778899999999999886  23222111 267888888742         12


Q ss_pred             HHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|.++||++.+...     ..+.+|+.++...   +++|++++++++
T Consensus       358 ~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~---t~e~i~~~~~~l  408 (427)
T 2w8t_A          358 QAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEH---TPAQIQTVLGMF  408 (427)
T ss_dssp             HHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCC---CHHHHHHHHHHH
Confidence            356788999999999987531     1358999988755   689999999985

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.13  E-value=4.4e-10  Score=106.37  Aligned_cols=165  Identities=14%  Similarity=0.080  Sum_probs=117.3

Q ss_pred             ccccceEEehhHh-hch-hccchhhhhcccCC--cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++ +|+ +++|. +..+.+++  .||     ++|.++ |. |.|.+++++++++.+..        ..+
T Consensus       202 ~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~di~~~s~sK~~~-g~-~gG~~~~~~~~~~~~~~--------~~~  270 (399)
T 3tqx_A          202 DKYNALVMVDDSHAVGFIGENGR-GTPEYCGVADRVDILTGTLGKALG-GA-SGGYTSGHKEIIEWLRN--------RSR  270 (399)
T ss_dssp             HHTTCEEEEECTTTTTTSSTTSC-CHHHHHTCTTCCSEEEEESSSSSC-SS-CCEEEEECHHHHHHHHH--------HCH
T ss_pred             HHcCCEEEEECCccccccCCCCC-chHHhhCCCCCCcEEEecchHhcc-cC-ceEEEEcCHHHHHHHHH--------hCc
Confidence            4579999999999 675 56654 35677887  778     469998 53 88999999999887763        111


Q ss_pred             ch--hhhcc-HHHHHHHHh-hHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          76 KL--KISDT-VRPHVQIKK-SVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        76 g~--T~agn-lA~aaala~-~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      +.  +.+.+ ++++++++. +.+    ++ .++++++.+++.+.|+++  ..+.   +...|.++.+.+..         
T Consensus       271 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~~~~~~---------  336 (399)
T 3tqx_A          271 PYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL--GFQL---VPGNHPIIPVMLGD---------  336 (399)
T ss_dssp             HHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH--TCCB---CCCSSSEEEEEEEC---------
T ss_pred             ceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--CCCc---CCCCCCEEEEEeCC---------
Confidence            11  22445 666666665 444    22 677888888998888877  2222   26778888888753         


Q ss_pred             hHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ......+.+.|.++||++.+...     ..+.+|+.+++..   +++|++++++++
T Consensus       337 ~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  389 (399)
T 3tqx_A          337 AQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVH---TQQQLDRAIEAF  389 (399)
T ss_dssp             HHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCC---CHHHHHHHHHHH
Confidence            12356788999999999986421     2368999998766   589999999975

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.11  E-value=5.6e-10  Score=106.32  Aligned_cols=167  Identities=13%  Similarity=0.039  Sum_probs=117.2

Q ss_pred             ccccceEEehhHh-hch-hccchhhhhcccCCcc--h-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQICR--F-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~P--D-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|+||++ +|+ +++|..+ .+.+++.|  |     ++|.++|+.  .|++++++++++.+..  ..    ..+
T Consensus       204 ~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~--gG~~~~~~~~~~~l~~--~~----~~~  274 (401)
T 1fc4_A          204 DKYDALVMVDDSHAVGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGAS--GGYTAARKEVVEWLRQ--RS----RPY  274 (401)
T ss_dssp             HHTTEEEEEECTTTTTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSS--CEEEEECHHHHHHHHH--HC----HHH
T ss_pred             HHcCCEEEEECcccccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCC--CEEEEcCHHHHHHHHH--hC----cCc
Confidence            3579999999999 598 3677653 45577766  5     469998774  5888899999887763  10    012


Q ss_pred             chhhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      ..+++.+ ++++++++. +.++   + .++++++.++|.+.|+++  ..+.+   .+.|.++.+++..         ...
T Consensus       275 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~~~~~~~---------~~~  340 (401)
T 1fc4_A          275 LFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA--GFTLA---GADHAIIPVMLGD---------AVV  340 (401)
T ss_dssp             HHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT--TCCBC---CSSSSEEEEEEEC---------HHH
T ss_pred             eeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCccc---CCCCCEEEEEcCC---------hHH
Confidence            2345666 666666655 4443   3 678888889998888875  23322   4678888888842         123


Q ss_pred             HHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++.+...     ..+.+|+.+++..   +++|++++++++
T Consensus       341 ~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  390 (401)
T 1fc4_A          341 AQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAH---TPEQITRAVEAF  390 (401)
T ss_dssp             HHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence            45688889999999987531     1358999988766   589999999985

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.10  E-value=1.1e-09  Score=102.83  Aligned_cols=161  Identities=10%  Similarity=-0.017  Sum_probs=104.2

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      |+++|+||++++|++ |...........+|       ++|.++ +| +++|++++++++.+.+..        ..  .+|
T Consensus       187 ~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~--~~~  254 (363)
T 3ffh_A          187 DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNI--------VR--PPF  254 (363)
T ss_dssp             TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHH--------TC--CSC
T ss_pred             CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCch-hceeeeecCHHHHHHHHH--------hC--CCC
Confidence            999999999999987 76554444444455       469998 77 599999999999988764        11  245


Q ss_pred             hcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC  157 (329)
Q Consensus        80 agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l  157 (329)
                      +.+ ++++++.+. +..+.+++..+.....++.+.+..++++.+..+.+.|.++.+++..+           ...+.+.|
T Consensus       255 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~l  323 (363)
T 3ffh_A          255 NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIE-----------AGTIFSYL  323 (363)
T ss_dssp             CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSSC-----------HHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCCC-----------HHHHHHHH
Confidence            566 555444433 21111233333333344444443344333444566788887777421           34578889


Q ss_pred             HHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         158 KEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       158 ~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++||++.++..  .++.+|+.++      +++|++++++++
T Consensus       324 ~~~gi~v~~g~~~~~~~~iRis~~------~~~~i~~~~~~l  359 (363)
T 3ffh_A          324 EKNGYITRSGAALGFPTAVRITIG------KEEDNSAVIALL  359 (363)
T ss_dssp             HHTTEECEETTTTTCTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHCCeEEEeCccCCCCCeEEEECC------CHHHHHHHHHHH
Confidence            999999987432  2579999865      579999999875

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.04  E-value=1.5e-09  Score=102.48  Aligned_cols=169  Identities=7%  Similarity=-0.112  Sum_probs=105.5

Q ss_pred             ccccceEEehhHhhchhccch-hhhhcccCCc-ch-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCLQIC-RF-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~-PD-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~   73 (329)
                      ..||+++|+||+++++.++|. ......++.. ||       ++|+++ +| +++|+++++ +++++.+...       .
T Consensus       190 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~-------~  261 (391)
T 3dzz_A          190 AKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEES-------F  261 (391)
T ss_dssp             HHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHH-------H
T ss_pred             HHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHH-------H
Confidence            467999999999999988874 3344444432 77       469997 77 499999997 8888877641       0


Q ss_pred             ccchhhhcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCC
Q psy7882          74 AHKLKISDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPL  145 (329)
Q Consensus        74 ~hg~T~agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~  145 (329)
                      .+..+++.+ ++++++.+. +    .+++ .++.++..++|.+.|++.   .|.+.-+...| .+..+.+.....     
T Consensus       262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----  333 (391)
T 3dzz_A          262 FLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE---VPEVKVLDSNASYLAWVDISALGM-----  333 (391)
T ss_dssp             HHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSEECCCCBSSEEEEECGGGCS-----
T ss_pred             HhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcEEeccCceEEEEEehhhcCC-----
Confidence            112334555 554444433 2    2333 455566666666666552   33333233334 444466643110     


Q ss_pred             ChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ....+.+.|+ ++||++.++..    ..+.+|+.+.  .   ++++++++++++
T Consensus       334 ---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~---~~~~i~~~l~~l  382 (391)
T 3dzz_A          334 ---NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--C---PKELVIDGMQRL  382 (391)
T ss_dssp             ---CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--S---CHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence               1345788886 89999987421    2478999876  2   589999999875

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.03  E-value=1.2e-09  Score=103.22  Aligned_cols=168  Identities=8%  Similarity=-0.056  Sum_probs=104.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKT   72 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~   72 (329)
                      ..||+++|+||++++|.++|..+ .....+.||          ++|+++ +| +++|+++++. ++++.+...       
T Consensus       194 ~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~-------  264 (391)
T 4dq6_A          194 LKHNVKIISDEIHSDIILKKHKH-IPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDA-------  264 (391)
T ss_dssp             HHTTCEEEEECTTTTCBCTTCCC-CCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHH-------
T ss_pred             HHcCCEEEeeccccccccCCCCc-cCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHH-------
Confidence            45799999999999998877422 112223332          579997 66 5999999886 888776530       


Q ss_pred             Cccchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeE-EEeecCCCCCCC
Q psy7882          73 PAHKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIG-VDLVQDKETKVP  144 (329)
Q Consensus        73 ~~hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~g-Ief~~d~~~~~p  144 (329)
                      ..+..+++.+ ++++++.+. +.    +++ .++.++..+++.+.|++.   .|.+..++..|.++. +++.....    
T Consensus       265 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~----  337 (391)
T 4dq6_A          265 FTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINEN---MPKLKVRKPEGTYLLWVDFSALGL----  337 (391)
T ss_dssp             HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSEECCCSBSSEEEEECGGGCC----
T ss_pred             HHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCEecCCCccEEEEEEhhhcCC----
Confidence            1122344566 555554443 22    222 344455555555555442   344444556666655 77753110    


Q ss_pred             CChHHHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          -...+.+.|.++ ||++.++.    ...+.+|+.++  .   ++++++++++++
T Consensus       338 ----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~---~~~~i~~~l~~l  386 (391)
T 4dq6_A          338 ----SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--C---PRSMLEEALIRI  386 (391)
T ss_dssp             ----CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--C---CHHHHHHHHHHH
Confidence                134688889888 99998742    13488999877  2   578999999875

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.03  E-value=1.5e-09  Score=102.37  Aligned_cols=170  Identities=12%  Similarity=-0.048  Sum_probs=109.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..||+++|.||+++++++.+.....+.++..++   ++|+++ +| +++|.+++++++++.+..        ..+..+++
T Consensus       184 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~--------~~~~~~~~  254 (375)
T 3op7_A          184 SEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPG-IRIGWVAANHQVTDILRD--------YRDYTMIC  254 (375)
T ss_dssp             HTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGG-GCCEEEECCHHHHHHHTT--------TGGGTTSC
T ss_pred             HHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcc-cceEEEEeCHHHHHHHHH--------HHhhhccC
Confidence            468999999999999987754444566777777   679998 67 599999999999987753        34455666


Q ss_pred             cc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        81 gn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                      .+ ++++++.+. +..++ +++..+.....++.+.+..++++.+..++..| .+..+.+..+.      +   ...+...
T Consensus       255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~  325 (375)
T 3op7_A          255 AGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------P---MEDFCLQ  325 (375)
T ss_dssp             CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS------C---HHHHHHH
T ss_pred             CCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC------C---HHHHHHH
Confidence            66 665555444 33332 44454444455555555555566555555544 34445553211      1   2446666


Q ss_pred             H-HHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 C-KEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l-~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      + .++||++.++..  ..+.+|+..  ..   +.++|+++++++
T Consensus       326 ll~~~gi~v~~g~~~~~~~~iRi~~--~~---~~~~i~~~l~~l  364 (375)
T 3op7_A          326 LLQEHGVLLVPGNRFERDGYVRLGF--AC---EQETLIKGLEKL  364 (375)
T ss_dssp             HHHHHCEECEEGGGGTCTTEEEECC--CS---CHHHHHHHHHHH
T ss_pred             HHHhCCEEEeChhhhCCCCeEEEEe--cC---CHHHHHHHHHHH
Confidence            6 589999987532  257888863  33   358899999875

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.02  E-value=3.5e-09  Score=98.97  Aligned_cols=165  Identities=6%  Similarity=-0.079  Sum_probs=107.7

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceee-echhHHHhhhhhhhccCCCCccch
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVH-TSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~-~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .||+++|+||+++++.+.+........+..++      ++|.++ +| +++|+++ +++++++.+..          ...
T Consensus       175 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~----------~~~  243 (361)
T 3ftb_A          175 EKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKA----------KQN  243 (361)
T ss_dssp             HHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHT----------TSC
T ss_pred             hcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHh----------hCC
Confidence            67999999999999987522233333343343      469998 66 5999988 89898887763          122


Q ss_pred             hhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +++.+ ++++++.+. +..+.+++..+.....++.+.+..+++|.+. .+++.|.++.+++.. .      +   ...+.
T Consensus       244 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~------~---~~~l~  313 (361)
T 3ftb_A          244 PWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN-I------S---GEKLY  313 (361)
T ss_dssp             TTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS-S------C---HHHHH
T ss_pred             CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC-C------C---HHHHH
Confidence            45666 666555554 2111134444444445555555445567666 677889888888753 1      1   34588


Q ss_pred             HHHHHCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.++.    ...+.+|+.++      +.+|++++++++
T Consensus       314 ~~l~~~gi~v~~g~~~~~~~~~~iRis~~------~~~~~~~l~~~l  354 (361)
T 3ftb_A          314 DSLLKEDIVIRRCCNFIGLDDSFVRFAIK------DEKKNTKFLRAL  354 (361)
T ss_dssp             HHHHTTTEECEECTTSTTCCTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHHCCeEEeeCccCCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence            88999999998743    12578999875      467777777764

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.02  E-value=2.9e-09  Score=100.71  Aligned_cols=164  Identities=5%  Similarity=-0.111  Sum_probs=102.1

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccC---Ccch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQ---ICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~G---V~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+||+++|.||++++|.+.|... ..+..+   ...+   ++|.++ +| +++|++++++++++.+..        ..+.
T Consensus       188 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~~  258 (376)
T 2dou_A          188 RKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLER--------VKGV  258 (376)
T ss_dssp             HHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHH--------HHHH
T ss_pred             HHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHH--------HHHh
Confidence            35799999999999997766321 122222   2233   679997 67 599999999999887764        2233


Q ss_pred             hhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+++.+ ++++++.+. +.    +++ .++.++..++|.+.|++    +  +.-++. -|+++.+++...      .+  
T Consensus       259 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~--~~~~~~~~~~~~~~~~~~~------~~--  324 (376)
T 2dou_A          259 IDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG----V--LSLLPPRATMYLWGRLPEG------VD--  324 (376)
T ss_dssp             HCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT----T--SEECCCCBSSEEEEECCTT------CC--
T ss_pred             cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----h--cCccCCCeeEEEEEECCCC------CC--
Confidence            445556 555554443 22    222 33344444444444433    3  222223 366777887421      11  


Q ss_pred             HHHHHHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+.+.|.++||++.++..    ..+.+|+.+..     ++++++++++.+
T Consensus       325 -~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~-----~~~~i~~~l~~l  371 (376)
T 2dou_A          325 -DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR-----PLEELLEAAKRI  371 (376)
T ss_dssp             -HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence             24588889999999987421    25789999863     478999999874

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.02  E-value=7.3e-10  Score=105.74  Aligned_cols=168  Identities=13%  Similarity=0.010  Sum_probs=105.9

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCc---ch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQIC---RF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~---PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      .+||+++|+||++++++++|.. .....++..   ++      ++|.+++| +++|++++++++.+.+..        ..
T Consensus       193 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~--------~~  263 (397)
T 2zyj_A          193 MERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPG-LRVAFAVAHPEALQKLVQ--------AK  263 (397)
T ss_dssp             HHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHH--------HH
T ss_pred             HHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccccc-ceeEEEecCHHHHHHHHH--------HH
Confidence            3579999999999999877752 223333333   33      46999977 499999999999887763        23


Q ss_pred             cchhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCC-ceeeE-EeeceeeEEEeecCCCCCCC
Q psy7882          75 HKLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFA-IVGDV-RGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p-~v~~V-RG~GLm~gIef~~d~~~~~p  144 (329)
                      ++.+++.+ ++++++.+. +.     +++ .++.++..++|.+.|++.   .| .+..+ .+.|.++.+++..+      
T Consensus       264 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~g~~~~~~~~g~~~~~~~~~~------  334 (397)
T 2zyj_A          264 QGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE---VPKEVRYTRPKGGMFVWMELPKG------  334 (397)
T ss_dssp             HHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH---SCTTSEECCCSBSSEEEEECSTT------
T ss_pred             HhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCeEEccCCccEEEEEEcCCC------
Confidence            34555556 555554433 21     111 233334444444444432   33 13222 24577888887431      


Q ss_pred             CChHHHHHHHHHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+   ...+.+.|.++||++.++..      ..+.+|+.++..    +++|++++++++
T Consensus       335 ~~---~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~----~~~~i~~~~~~l  386 (397)
T 2zyj_A          335 LS---AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL----DREGIAEGVRRL  386 (397)
T ss_dssp             CC---HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS----CHHHHHHHHHHH
T ss_pred             CC---HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC----CHHHHHHHHHHH
Confidence            11   34688889999999987421      357899998763    589999999975

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.00  E-value=1.9e-09  Score=102.53  Aligned_cols=169  Identities=9%  Similarity=-0.006  Sum_probs=104.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||++++|.++|.......  ..++      ++|.++ .| +++|.+++++++.+.+..        ..+..
T Consensus       191 ~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~~  259 (391)
T 3h14_A          191 QAQGASFISDEIYHGIEYEAKAVTALE--LTDECYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVER--------IAQNM  259 (391)
T ss_dssp             HHTTCEEEEECTTTTCBSSSCCCCGGG--TCSSSEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHH--------HHHHT
T ss_pred             HHcCCEEEEECcchhcccCCCCcChhh--cCCCEEEEEechhccCCcc-ceeEEEEeCHHHHHHHHH--------HHhhh
Confidence            357999999999999988775322222  2333      469998 77 499999999999887763        23445


Q ss_pred             hhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +++.+ ++++++++. +..+.+++..+.....++.+.+..++++....++..| ++..+++.....        ....+.
T Consensus       260 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  331 (391)
T 3h14_A          260 FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTD--------DSRAFA  331 (391)
T ss_dssp             TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCS--------CHHHHH
T ss_pred             ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCC--------CHHHHH
Confidence            56666 555555443 3101133333333344444444333445443344444 666667642110        134577


Q ss_pred             HHHHHC-CceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEH-GLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~-GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++ ||++.++..     ..+.+|+.++.     +++||+++++++
T Consensus       332 ~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-----~~~~i~~~l~~l  375 (391)
T 3h14_A          332 AEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-----ATADIEEGLDRL  375 (391)
T ss_dssp             HHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-----CHHHHHHHHHHH
T ss_pred             HHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence            787775 999987421     25689998775     468999999875

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.00  E-value=3e-09  Score=100.92  Aligned_cols=168  Identities=10%  Similarity=-0.068  Sum_probs=102.4

Q ss_pred             ccccceEEehhHhhchhccch----hhhhc-ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQ-CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e-~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++++|.++|.    ++... .++....   ++|.++ .| +++|++++++++++.+..        ..+
T Consensus       193 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~  263 (386)
T 1u08_A          193 AGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRK--------VHQ  263 (386)
T ss_dssp             TTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHH--------HHH
T ss_pred             HHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHH--------HHH
Confidence            467999999999999877663    22222 2344444   679998 67 599999999999887753        223


Q ss_pred             chhhhcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          76 KLKISDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      ..+|+.+ ++++++.+. +    .+++ .+++++..++|.+.|++    ++.......-|+++.+++.....    .+  
T Consensus       264 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~----~~--  333 (386)
T 1u08_A          264 YLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE----SRLEILPCEGTYFLLVDYSAVST----LD--  333 (386)
T ss_dssp             HHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS----SSCEECCCCBSSEEEEECTTTCC----SC--
T ss_pred             hhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCceEEEEEecCCCCC----CC--
Confidence            3455555 544443332 2    2222 34445555555554443    33211111236778888742100    01  


Q ss_pred             HHHHHHHHHH-HCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+.+.+. ++||++.++.      ...+.+|+.++.     +++||+++++++
T Consensus       334 -~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-----~~~~i~~~~~~l  383 (386)
T 1u08_A          334 -DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-----KESTLLAAAERL  383 (386)
T ss_dssp             -HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-----CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-----CHHHHHHHHHHH
Confidence             245777776 6899998742      135789998862     589999999874

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=98.99  E-value=1.2e-09  Score=105.80  Aligned_cols=171  Identities=11%  Similarity=-0.023  Sum_probs=108.5

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCcch------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||++++|.++|.. .....++..++      ++|.+++| +++|++++++++++.+..        ..+..
T Consensus       218 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~--------~~~~~  288 (425)
T 1vp4_A          218 EKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQ--------AKQSA  288 (425)
T ss_dssp             HHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHH--------HHHHH
T ss_pred             HHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccc-cceEEEeeCHHHHHHHHH--------Hhhhh
Confidence            3579999999999999776642 22222222222      56999977 599999999999887763        22344


Q ss_pred             hhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCCh
Q psy7882          78 KISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        78 T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      +++.+ ++++++.+. +.      +++ .++.++..++|.+.|+++...++.+..+ .+.|.++.+++..+.      + 
T Consensus       289 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~------~-  361 (425)
T 1vp4_A          289 DLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF------D-  361 (425)
T ss_dssp             HSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC------C-
T ss_pred             cCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC------C-
Confidence            55556 555554443 22      222 3445566666777666542221123222 345778888885311      1 


Q ss_pred             HHHHHHHHHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        ...+.+.|.++||++.++..      ..+.+|+.++..    +++|++++++++
T Consensus       362 --~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~----~~e~i~~~l~~l  411 (425)
T 1vp4_A          362 --TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP----PDEKIVEGIKRL  411 (425)
T ss_dssp             --TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS----CHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC----CHHHHHHHHHHH
Confidence              12367788888999987421      257899998763    589999999985

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=98.99  E-value=2.2e-09  Score=100.92  Aligned_cols=167  Identities=11%  Similarity=0.031  Sum_probs=103.5

Q ss_pred             ccccceEEehhHhhchhccc-----hhhhhcccCCcch---HHHhhc-CCccccceee-echhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG-----TYLGFQCLQICRF---VQKDFK-GSFWDKLIVH-TSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG-----~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~-~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|+||++++++++|     .++.....+...+   ++|+++ +| +++|.++ .++++++.+..        ..
T Consensus       180 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~--------~~  250 (377)
T 3fdb_A          180 HRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQ--------LS  250 (377)
T ss_dssp             HHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHH--------SC
T ss_pred             HHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcc-hhheEEEeCCHHHHHHHHH--------HH
Confidence            36799999999999998887     3333322333344   579996 66 5999554 57888887763        34


Q ss_pred             cchhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceee-EEEeecCCCCCCCCC
Q psy7882          75 HKLKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMI-GVDLVQDKETKVPLN  146 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~-gIef~~d~~~~~p~~  146 (329)
                      +..+++.+ ++++++.+. +.    +++ .++.++..++|.+.|++.   .|.+.-+...|.++ .+++.....     +
T Consensus       251 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~  322 (377)
T 3fdb_A          251 PVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKR---IPGAKITPMQATYLMWIDFRDTTI-----E  322 (377)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---STTCEECCCSBCSEEEEECTTSCC-----C
T ss_pred             HhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEecCCeeEEEEEECcccCC-----C
Confidence            55667777 666555444 22    222 445556666666665543   34333344444444 577743111     1


Q ss_pred             hHHHHHHHHHHHHC-CceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEH-GLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~-GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          ..+...++++ ||++.++..    ..+.+|+.+..     ++++|+++++++
T Consensus       323 ----~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-----~~e~i~~~l~~l  369 (377)
T 3fdb_A          323 ----GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-----SREVLEEAIDRM  369 (377)
T ss_dssp             ----SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-----CHHHHHHHHHHH
Confidence                1256666665 999987431    25889998762     578999999875

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=98.99  E-value=2.5e-09  Score=102.69  Aligned_cols=168  Identities=8%  Similarity=-0.113  Sum_probs=103.8

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcc----cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQC----LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~----~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|+||++++++++|.. .....    ++....   ++|.++ .| +++|++++++++++.+..        ..+
T Consensus       190 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~  260 (411)
T 2o0r_A          190 VAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRA--------AKQ  260 (411)
T ss_dssp             HHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHH--------HHH
T ss_pred             HHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHH--------HHh
Confidence            3579999999999999877642 22222    222232   679998 77 599999999999887753        122


Q ss_pred             chhhhcc-HHHHH---HHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          76 KLKISDT-VRPHV---QIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        76 g~T~agn-lA~aa---ala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      ..+++.+ +++++   +++.  +.+++ .++++++.++|.+.|+++    +........|+++.+++.....    .+  
T Consensus       261 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~----~~--  330 (411)
T 2o0r_A          261 YLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI----GFAVHDSYGTYFLCADPRPLGY----DD--  330 (411)
T ss_dssp             HHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----TCEECCCCBSSEEEEECGGGTC----CC--
T ss_pred             hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc----CCEecCCCeeEEEEEecCCCCC----CC--
Confidence            3344554 44333   3332  22333 456667777777777664    2211112347778888753100    01  


Q ss_pred             HHHHHHHHHH-HCCceeeccCC---------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGGL---------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G~---------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+...|. ++||++.++..               ..+.+||.+.  .   +++|++++++++
T Consensus       331 -~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~---~~e~i~~~~~~l  389 (411)
T 2o0r_A          331 -STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--K---RDDTLDEAIRRL  389 (411)
T ss_dssp             -HHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC--S---CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence             245777776 68999976421               2467999874  2   578999999975

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=98.96  E-value=2.3e-09  Score=101.05  Aligned_cols=163  Identities=6%  Similarity=-0.094  Sum_probs=102.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhc---------ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQ---------CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e---------~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~   71 (329)
                      ..||+++|+||++++|.++|......         .++...+   ++|.++ +| +++|.+++++++++.+..       
T Consensus       184 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~-------  255 (376)
T 3ezs_A          184 LKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKA-------  255 (376)
T ss_dssp             HHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH-------
T ss_pred             HHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHH-------
Confidence            35799999999999998877443322         2344444   579996 67 599999999999988764       


Q ss_pred             CCccchhhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          72 TPAHKLKISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        72 ~~~hg~T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                       ..+..+++.+ ++++++.+. +..+.+++..+.....++.+.+..+  +. . ..+.|.++.+++. +           
T Consensus       256 -~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--~~-~-~~~~~~~~~~~~~-~-----------  318 (376)
T 3ezs_A          256 -FRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--NT-L-IYPYSFYVYLPVQ-N-----------  318 (376)
T ss_dssp             -HHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST--TC-C-CCSBSSEEEEECS-C-----------
T ss_pred             -HHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc--CC-C-CCCcceEEEEECC-C-----------
Confidence             2334456666 555444433 2111122233333333333333222  22 1 4566788877774 1           


Q ss_pred             HHHHHHHHHH-CCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKE-HGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e-~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+...|.+ +||++.++.      ...+.+|+.++.     +++|++++++++
T Consensus       319 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-----~~~~i~~~l~~l  368 (376)
T 3ezs_A          319 GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-----DTPLLEKPLEII  368 (376)
T ss_dssp             HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-----CHHHHHHHHHHH
Confidence            2457788887 899998742      245899998762     589999999975

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=98.96  E-value=6.8e-09  Score=97.63  Aligned_cols=164  Identities=10%  Similarity=-0.092  Sum_probs=105.0

Q ss_pred             ccc--cceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           5 YYR--DCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~--giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ..|  |+++|+||++++|+..+.....+.++...+   ++|...+| +++|++++++++++.+..        .  ..+|
T Consensus       187 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~--------~--~~~~  255 (367)
T 3euc_A          187 QGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAG-IRLGYVAGDPQWLEQLDK--------V--RPPY  255 (367)
T ss_dssp             BTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCS-CCEEEEEECHHHHHHHGG--------G--CCSS
T ss_pred             hhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccc-cCceeeeeCHHHHHHHHH--------h--CCCC
Confidence            456  899999999999976665555555555555   56995566 599999999999887753        1  1234


Q ss_pred             hcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSC  157 (329)
Q Consensus        80 agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l  157 (329)
                      +.+ ++++++.+. +..+.+++..+.....++.|.+..+++|.+..+.+.|.++.+.+. +           ...+.+.|
T Consensus       256 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~-----------~~~l~~~l  323 (367)
T 3euc_A          256 NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP-D-----------AAQTFDRL  323 (367)
T ss_dssp             CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS-C-----------HHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-C-----------HHHHHHHH
Confidence            555 555444443 221112333333333444444433445544445567778777764 1           24577788


Q ss_pred             HHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         158 KEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       158 ~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++||++.+...    ..+.+|+...      +++|++++++++
T Consensus       324 ~~~gi~v~~~~~~~~~~~~~iRis~~------~~~~i~~~~~~l  361 (367)
T 3euc_A          324 LARKVLIKNVSKMHPLLANCLRVTVS------TPEENAQFLEAF  361 (367)
T ss_dssp             HTTTEECEECGGGCGGGTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHCCeEEEECCccCCCCCCEEEEecC------CHHHHHHHHHHH
Confidence            999999987532    3578999843      589999999975

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=98.96  E-value=5.4e-09  Score=102.20  Aligned_cols=174  Identities=11%  Similarity=-0.026  Sum_probs=108.3

Q ss_pred             ccccceEEehhHhhchhccch---hhhh--cccCCcch---HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT---YLGF--QCLQICRF---VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~---~fA~--e~~GV~PD---i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|.|||++++.++|.   +.++  +.++..++   ++|.++ .| +++|.+++ ++++++.+..        ..
T Consensus       231 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~--------~~  301 (447)
T 3b46_A          231 VKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAK--------AH  301 (447)
T ss_dssp             HHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHH--------HH
T ss_pred             HHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHH--------HH
Confidence            367999999999999987763   2222  13455555   689998 77 49999999 9999887753        22


Q ss_pred             cchhhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882          75 HKLKISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~  145 (329)
                      +..+|+.+ ++++++.+. +.      +++ .++.++..++|.+.|+++    +.......-|+++.+++...... ..+
T Consensus       302 ~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~~~~~~~p-~~~  376 (447)
T 3b46_A          302 TRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL----GLPYTAPEGTYFVLVDFSKVKIP-EDY  376 (447)
T ss_dssp             HHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH----TCCEECCSBSSEEEEECTTCCCC-TTC
T ss_pred             hhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCeeEEEEEecccccCc-ccc
Confidence            34556666 444443333 22      222 445666666676666664    32111234578888887431000 000


Q ss_pred             C-------hHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 N-------SRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~-------~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +       ......+...|. ++||++.++..         ..+.+||.++.     ++++|+++++.+
T Consensus       377 ~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-----~~e~l~~~~~~l  440 (447)
T 3b46_A          377 PYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-----DDAYLENAVERL  440 (447)
T ss_dssp             CCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-----CHHHHHHHHHHG
T ss_pred             ccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-----CHHHHHHHHHHH
Confidence            0       012346777776 58999987521         15789999862     579999999986

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=98.95  E-value=9.7e-09  Score=96.26  Aligned_cols=170  Identities=7%  Similarity=-0.045  Sum_probs=105.9

Q ss_pred             ccccceEEehhHhhchhc--cch---------hhhhcccCCcch---HHHhhcCCccccceeeechhHH-Hhhhhhhhcc
Q psy7882           5 YYRDCGVVVSAVDFGSGD--NGT---------YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTF-ENFIKIKYQI   69 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR--TG~---------~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~-d~~~~~~~~~   69 (329)
                      ..||+++|+||+++|+..  +|.         .+..+. ++.+.   ..|.+++|. ++|+++++++.+ +.+.. ....
T Consensus       198 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~-~~g~~~~~~~~~~~~~~~-~~~~  274 (397)
T 3f9t_A          198 KENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPI-PSGGILFKDIGYKRYLDV-DAPY  274 (397)
T ss_dssp             HHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCS-SCEEEEESSGGGGGGTCE-ECTT
T ss_pred             HHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCC-CceEEEEeCHHHHHhhcc-CCcc
Confidence            457999999999998533  443         333344 55555   469988875 999988876643 22211 0000


Q ss_pred             C----CCCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC
Q psy7882          70 L----KTPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE  140 (329)
Q Consensus        70 ~----~~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~  140 (329)
                      .    ....++++.+.+ +++.++++.   +-+++ .++..++.+++.+.|+++  ..+.+..  ..+.++.+.+..   
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~---  347 (397)
T 3f9t_A          275 LTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN--NFKPVIE--PILNIVAIEDED---  347 (397)
T ss_dssp             SSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCBSSC--CSSSEEEEECTT---
T ss_pred             ccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEcC--CCccEEEEEeCC---
Confidence            0    001123333345 555555543   22333 677888888888888876  3443332  234444444321   


Q ss_pred             CCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                               ...+.+.|.++||++.++. .++.+|+.+++.+   +++|++++++++
T Consensus       348 ---------~~~~~~~l~~~gi~v~~~~-~~~~~Ri~~~~~~---~~e~i~~~~~~l  391 (397)
T 3f9t_A          348 ---------YKEVCKKLRDRGIYVSVCN-CVKALRIVVMPHI---KREHIDNFIEIL  391 (397)
T ss_dssp             ---------HHHHHHHHHHTTCBCEECS-SSSEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHhCCeEEeccC-CCCEEEEEEcCCC---CHHHHHHHHHHH
Confidence                     3468888999999998854 3689999998766   589999999975

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=98.94  E-value=2.6e-09  Score=101.94  Aligned_cols=168  Identities=8%  Similarity=0.008  Sum_probs=105.6

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCc---ch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQIC---RF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~---PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||+++++.++|.. .....++..   .+   ++|.++.|+ ++|++++++++++.+..        ..+..
T Consensus       205 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~~~~~~--------~~~~~  275 (407)
T 2zc0_A          205 SKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGF-RIGWIIAEGEILKKVLM--------QKQPI  275 (407)
T ss_dssp             HHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTS-CCEEEECCHHHHHHHHH--------HHTTT
T ss_pred             HHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCc-ceEEEecCHHHHHHHHH--------HHHhh
Confidence            3579999999999999776652 223333322   23   579999884 99999999999887764        12233


Q ss_pred             hhhcc-HHHHHHHHh-hH--Hh-H-----HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCC
Q psy7882          78 KISDT-VRPHVQIKK-SV--LE-R-----FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        78 T~agn-lA~aaala~-~i--le-~-----le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~  146 (329)
                      +++.+ ++++++.+. +.  ++ +     .++.++..++|.+.|++.   .|.+.-+ ...|+++.+.+..+      .+
T Consensus       276 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~------~~  346 (407)
T 2zc0_A          276 DFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH---LPNAEFTKPIAGMFVMFFLPEG------AD  346 (407)
T ss_dssp             TSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH---CTTSCBCCCSBSSEEEEECSTT------CC
T ss_pred             cCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEecCCCcEEEEEEcCCC------CC
Confidence            44444 444433332 11  22 2     445566666666666553   2222111 23577788887421      11


Q ss_pred             hHHHHHHHHHHHHC-CceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEH-GLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~-GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+.+.|.++ ||++.++..      ..+.+|+.++..    +++|++++++++
T Consensus       347 ---~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~----~~~~i~~~~~~l  397 (407)
T 2zc0_A          347 ---GISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP----SKEEIPIGIKKL  397 (407)
T ss_dssp             ---HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS----CTTHHHHHHHHH
T ss_pred             ---HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC----CHHHHHHHHHHH
Confidence               34578888888 999987421      257899998765    358999999875

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=98.93  E-value=4.9e-09  Score=101.50  Aligned_cols=170  Identities=8%  Similarity=-0.022  Sum_probs=100.5

Q ss_pred             ccccceEEehhHhhchhccchhhh-hcccC----Cc-----ch-------HHHhhc-CCccccceeee-chhHHHhhhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLG-FQCLQ----IC-----RF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKI   65 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA-~e~~G----V~-----PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~   65 (329)
                      ..||+++|+||++++++++|..+. ....+    +.     ||       ++|+++ +| +++|++++ ++++.+.+.. 
T Consensus       221 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~-  298 (435)
T 3piu_A          221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-  298 (435)
T ss_dssp             HHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH-
T ss_pred             HHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHH-
Confidence            357999999999999888775432 22222    22     66       469998 77 49999999 5667666542 


Q ss_pred             hhccCCCCccchhhhcc-HHH---HHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEE
Q psy7882          66 KYQILKTPAHKLKISDT-VRP---HVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVD  134 (329)
Q Consensus        66 ~~~~~~~~~hg~T~agn-lA~---aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIe  134 (329)
                               +..++..+ +++   +++++. +.+++     .+++++..++|.+.|++    ++ +..+++.| +++.++
T Consensus       299 ---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~g~~~~~~  364 (435)
T 3piu_A          299 ---------MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK----SG-ISCLNGNAGLFCWVD  364 (435)
T ss_dssp             ---------HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TT-CEECCCCSSSEEEEE
T ss_pred             ---------HhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh----cC-CcccCCCeeEEEEEE
Confidence                     12222333 333   233333 33322     23334444444444433    33 22334554 888888


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +......  + .......+...|+++ ||++.++.    ...+.+||.++.+    ++++|+++++++
T Consensus       365 l~~~~~~--~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~----~~e~i~~~l~~l  425 (435)
T 3piu_A          365 MRHLLRS--N-TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL----PERTLDLAMQRL  425 (435)
T ss_dssp             CGGGSSS--S-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS----CHHHHHHHHHHH
T ss_pred             ccccccc--C-CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC----CHHHHHHHHHHH
Confidence            8542111  0 112345688888877 99998742    2357899998654    479999999975

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=98.93  E-value=1.2e-08  Score=97.24  Aligned_cols=179  Identities=9%  Similarity=-0.094  Sum_probs=104.6

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++++|.++|..+ ....+...+|       ++|.++ +| +++|++++++++++.+..        ..+
T Consensus       197 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~  267 (410)
T 3e2y_A          197 VKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQT--------VQQ  267 (410)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHH--------HHH
T ss_pred             HHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHH--------HHH
Confidence            35799999999999998887532 3333332222       579998 77 599999999999887753        233


Q ss_pred             chhhhcc-HHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC-
Q psy7882          76 KLKISDT-VRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP-  144 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p-  144 (329)
                      .++++.+ ++++++.+. +.       .++ ++++.+.....++.|.+..++++........|+++.+++......... 
T Consensus       268 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (410)
T 3e2y_A          268 NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDM  347 (410)
T ss_dssp             TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTC
T ss_pred             hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccc
Confidence            4556666 555444333 21       111 333333333344444443344444333445677888887532110000 


Q ss_pred             -CChHHHHHHHHHH-HHCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 -LNSRHMTHILDSC-KEHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 -~~~~~~~~~~~~l-~e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       -+......+...+ .++||++.++..         ..+.+||.  +..   ++++|+++++++
T Consensus       348 ~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis--~~~---~~e~l~~~l~~l  406 (410)
T 3e2y_A          348 NSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFC--FIK---KDSTLDAAEEIF  406 (410)
T ss_dssp             CSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEE--CCC---CHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEE--EcC---CHHHHHHHHHHH
Confidence             0001123455544 578999987432         13789987  333   689999999875

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=98.93  E-value=5.8e-09  Score=99.18  Aligned_cols=168  Identities=11%  Similarity=-0.042  Sum_probs=100.2

Q ss_pred             ccccceEEehhHhhchhccch-hhhhccc-----CCcch---HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCL-----QICRF---VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~-----GV~PD---i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~   73 (329)
                      ..||+++|+||++++|+++|. ......+     +...+   ++|.++ +| +++|+++++ +++++.+..        .
T Consensus       194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~--------~  264 (399)
T 1c7n_A          194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTK--------S  264 (399)
T ss_dssp             HHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHH--------H
T ss_pred             HHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHH--------H
Confidence            357999999999999987774 2222222     11122   579998 77 499999987 568887653        1


Q ss_pred             ccchhh-hcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceee-EEEeecCCCCCCC
Q psy7882          74 AHKLKI-SDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMI-GVDLVQDKETKVP  144 (329)
Q Consensus        74 ~hg~T~-agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~-gIef~~d~~~~~p  144 (329)
                      .+..++ +.+ ++++++.+. +    .+++ .++.++..+++.+.|++.   +|.+..+++.|.++ .+++....     
T Consensus       265 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-----  336 (399)
T 1c7n_A          265 RDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVN---HPEIKAPLIEGTYLQWIDFRALK-----  336 (399)
T ss_dssp             HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSBCCCCSBSSEEEEECGGGC-----
T ss_pred             HhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhh---CCCCeEecCCceEEEEEEcccCC-----
Confidence            122223 334 555444333 2    2222 333444444554444431   44444455666554 57774310     


Q ss_pred             CChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+   ...+.+.|+ ++||++.++..    ..+.+|+.++..     +++++++++.+
T Consensus       337 ~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~-----~~~l~~~l~~l  386 (399)
T 1c7n_A          337 MD---HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP-----SSVIQESLERL  386 (399)
T ss_dssp             CC---HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC-----HHHHHHHHHHH
T ss_pred             CC---HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC-----HHHHHHHHHHH
Confidence            01   345788887 68999987431    257899998742     57899998875

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=98.93  E-value=8.6e-10  Score=104.85  Aligned_cols=167  Identities=9%  Similarity=-0.019  Sum_probs=102.9

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccC-Ccch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQ-ICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~G-V~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      .+||+++|+||++++++++|..+ ....++ ..+|       ++|+++ .| +++|++++++++++.+..        ..
T Consensus       209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~  279 (407)
T 3nra_A          209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEK--------LQ  279 (407)
T ss_dssp             HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHH--------HH
T ss_pred             HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHH--------HH
Confidence            35799999999999998877533 333333 2233       469998 77 599999999999887764        23


Q ss_pred             cchhhhcc-HHHHHHHHh-----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCC
Q psy7882          75 HKLKISDT-VRPHVQIKK-----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~  146 (329)
                      +..+++.+ ++++++.+.     +.+++ .++.+++.++|.+.|    ++++.+.-++.. |.++.+.+....       
T Consensus       280 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~~~~~~~~~~~~-------  348 (407)
T 3nra_A          280 AIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVL----RGCEGVFARTPQAGSYLFPRLPKLA-------  348 (407)
T ss_dssp             HHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHH----HTSTTCBCCCCSBSSEECCBCCCBS-------
T ss_pred             hhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH----hcCCCceeccCCeeEEEEEeCCCCC-------
Confidence            34455555 444443322     22332 344444444444444    445544434444 466666654211       


Q ss_pred             hHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .....+...|++ +||++.++..    ..+.+|+.++.     ++++|+++++++
T Consensus       349 -~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-----~~~~i~~~~~~l  398 (407)
T 3nra_A          349 -VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-----DHEAAVAAARRI  398 (407)
T ss_dssp             -SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-----CHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-----CHHHHHHHHHHH
Confidence             013457777865 6999987431    35789998762     589999999975

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=98.92  E-value=1.5e-08  Score=95.51  Aligned_cols=165  Identities=4%  Similarity=-0.104  Sum_probs=101.0

Q ss_pred             ccccceEEehhHhhchhccchh-hhh-cccCCcch---HHHhhc-CCccccceee-echhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGF-QCLQICRF---VQKDFK-GSFWDKLIVH-TSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~-e~~GV~PD---i~KaLg-GG~~PigAv~-~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+||+++|+||++++|++.|.. ... +.++....   ++|.++ +| +++|+++ +++++++.+..  .        ..
T Consensus       176 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~--~--------~~  244 (364)
T 1lc5_A          176 KSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRR--Q--------QM  244 (364)
T ss_dssp             HHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHH--H--------SC
T ss_pred             hhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCc-cceEEEEECCHHHHHHHHH--h--------CC
Confidence            3579999999999998765422 111 22333232   579998 77 5999999 99999887763  1        12


Q ss_pred             hhhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +++.+ ++++++.+. +.-+.+++..+.....++.|.+..+++|.+..+++.|.++.+++..+           ...+.+
T Consensus       245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~-----------~~~l~~  313 (364)
T 1lc5_A          245 PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCERE-----------DIDLQR  313 (364)
T ss_dssp             TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESCT-----------TCCHHH
T ss_pred             CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCCc-----------HHHHHH
Confidence            45566 555555444 22111333333333334444433344554444466788888877421           113777


Q ss_pred             HHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.+...    .++.+|+...      +.+|++++++++
T Consensus       314 ~l~~~gi~v~~g~~~~~~~~~~iRis~~------~~~~~~~l~~~l  353 (364)
T 1lc5_A          314 RLLTQRILIRSCANYPGLDSRYYRVAIR------SAAQNERLLAAL  353 (364)
T ss_dssp             HHHTTTEECEECTTSTTCCTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHCCcEEeeCcccCCCCCCEEEEEeC------CHHHHHHHHHHH
Confidence            88899999987532    2578998832      478888888874

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=98.90  E-value=6.3e-09  Score=102.26  Aligned_cols=168  Identities=12%  Similarity=0.016  Sum_probs=105.5

Q ss_pred             ccccceEEehhHhhchhccch----hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+||+++|.||+++++.+.|.    +++++..+...+   ++|.++.| +++|.+++++++++.+..        ..+..
T Consensus       247 ~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~G-lriG~v~~~~~l~~~l~~--------~~~~~  317 (448)
T 3aow_A          247 SEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPG-FRIGWMVGDPGIIRKMEI--------AKQST  317 (448)
T ss_dssp             HHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHH--------HHHHH
T ss_pred             HHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcccc-ccEEEEEeCHHHHHHHHH--------HHHHh
Confidence            357999999999999877664    333333444455   67999988 499999999999887763        22334


Q ss_pred             hhhcc-HHHHHHHHh-hH--HhH-HH----HHHHHHHHHHHHHHHHHHhCC-ceeeEEe-eceeeEEEeecCCCCCCCCC
Q psy7882          78 KISDT-VRPHVQIKK-SV--LER-FV----HTYVVGNFLLTHLSKLREEFA-IVGDVRG-KGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        78 T~agn-lA~aaala~-~i--le~-le----~v~~lG~~L~~gL~eL~~~~p-~v~~VRG-~GLm~gIef~~d~~~~~p~~  146 (329)
                      +++.+ ++++++.+. +.  +++ ++    ..++..+++.+.|++.   .| .+..++. -|+++.+++...      .+
T Consensus       318 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~g~~~~~p~~g~~~~v~~~~~------~~  388 (448)
T 3aow_A          318 DLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF---MPEGVKWTKPEGGMFIWVTLPDG------ID  388 (448)
T ss_dssp             HSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCTTCEECCCSBSSEEEEECSTT------CC
T ss_pred             cCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEeCCCccEEEEEEcCCC------CC
Confidence            55555 544443332 11  122 22    2334444444444432   34 2332333 367778887421      11


Q ss_pred             hHHHHHHHHHHHHCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+...|.++||++.++.      ...+.+|+.++..    ++++|+++++++
T Consensus       389 ---~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~----~~e~i~~~~~~L  438 (448)
T 3aow_A          389 ---SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYV----DEDKIMEGIKRL  438 (448)
T ss_dssp             ---HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSS----CTHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCC----CHHHHHHHHHHH
Confidence               3458888999999998742      1357899998753    468999999875

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=98.90  E-value=1.5e-08  Score=95.73  Aligned_cols=157  Identities=10%  Similarity=0.004  Sum_probs=105.2

Q ss_pred             ccceEEehhHhhchhccchhhhh-cccC-Ccch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGF-QCLQ-ICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~-e~~G-V~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      +++++|+||++++|++....+.. +.++ ...+   ++|.++ +| +++|++++++++.+.+..        .  ..+|+
T Consensus       193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~--~~~~~  261 (369)
T 3cq5_A          193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVML--------V--RLPYH  261 (369)
T ss_dssp             CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHT--------T--SCTTC
T ss_pred             CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHH--------c--CCCCC
Confidence            35999999999999764333332 3344 4445   579998 67 599999999998887753        1  12344


Q ss_pred             cc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          81 DT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        81 gn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      .+ ++++++.+.    +.+++ .++.++..++|.+.|++.    + +.-+++.|.++.+++..        +   ...+.
T Consensus       262 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~~~~~~~~~~~~~~~~--------~---~~~l~  325 (369)
T 3cq5_A          262 LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL----G-YAVVPSESNFVFFGDFS--------D---QHAAW  325 (369)
T ss_dssp             SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH----T-CEEECCSSSEEEEECCS--------S---HHHHH
T ss_pred             CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC----C-CEECCCCCeEEEEECCC--------C---HHHHH
Confidence            55 555444333    23333 566777777777777663    2 22345677888877631        1   24577


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.+.+ .++.+|+.++      +++|++++++++
T Consensus       326 ~~l~~~gi~v~~~~-~~~~iRis~~------~~~~i~~~~~~l  361 (369)
T 3cq5_A          326 QAFLDRGVLIRDVG-IAGHLRTTIG------VPEENDAFLDAA  361 (369)
T ss_dssp             HHHHHTTEECBCCS-CTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHHCCEEEEECC-CCCeEEEEeC------CHHHHHHHHHHH
Confidence            88889999998863 3578999886      478999999875

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=98.90  E-value=1.3e-08  Score=97.49  Aligned_cols=179  Identities=9%  Similarity=-0.027  Sum_probs=102.9

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccC----Ccch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQ----ICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~G----V~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++++|.++|.. .....+.    ...+   ++|.++ .| +++|++++++++++.+..        ..+
T Consensus       204 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~  274 (422)
T 3fvs_A          204 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRT--------VHQ  274 (422)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHH--------HHH
T ss_pred             HHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHH--------HHh
Confidence            3579999999999999888742 2222222    2223   579998 67 599999999999887753        233


Q ss_pred             chhhhcc-HHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC--
Q psy7882          76 KLKISDT-VRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV--  143 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~--  143 (329)
                      ..+++.+ ++++++.+. +.       .++ ++++.+.-...++.|.+..++++........|++..+++........  
T Consensus       275 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (422)
T 3fvs_A          275 NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDL  354 (422)
T ss_dssp             TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCC
T ss_pred             hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhhccccccc
Confidence            4566666 555444433 21       111 33333333333444444333444322334557777777743100000  


Q ss_pred             CC--ChHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         144 PL--NSRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       144 p~--~~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.  +......+...++ ++||++.+...         ..+.+||...  .   ++++|+++++++
T Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~---~~e~i~~~l~~l  415 (422)
T 3fvs_A          355 PGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV--K---DEATLQAMDEKL  415 (422)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC--C---CHHHHHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence            00  0011345666655 57999887431         2578999743  3   689999999975

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=98.89  E-value=2.5e-08  Score=94.33  Aligned_cols=158  Identities=10%  Similarity=0.076  Sum_probs=101.9

Q ss_pred             ccceEEehhHhhchhccchhhhh-cccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGF-QCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~-e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      +|+++|+||++++|++...++.. +.++....   ++|.++ .| +++|.+++++++.+.+..  .        ..+|+.
T Consensus       177 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--~--------~~~~~~  245 (356)
T 1fg7_A          177 GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAG-LRCGFTLANEEVINLLMK--V--------IAPYPL  245 (356)
T ss_dssp             TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHH--H--------SCSSCS
T ss_pred             CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCch-hhhEEEEeCHHHHHHHHH--h--------cCCCCC
Confidence            78999999999999743333332 22332222   569997 77 599999999999887763  1        123345


Q ss_pred             c-HHHHHHHHh----hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCce-eeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          82 T-VRPHVQIKK----SV--LER-FVHTYVVGNFLLTHLSKLREEFAIV-GDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        82 n-lA~aaala~----~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v-~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      + ++++++.+.    +.  +++ .++.++..++|.+.|++    ++.+ ....+.|.++.+++. +           ...
T Consensus       246 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~-~-----------~~~  309 (356)
T 1fg7_A          246 STPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE----IPCVEQVFDSETNYILARFK-A-----------SSA  309 (356)
T ss_dssp             CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----STTEEEECCCSSSEEEEEET-T-----------HHH
T ss_pred             CHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHh----CCCceEECCCCCeEEEEECC-C-----------HHH
Confidence            5 555444443    22  333 45556666666666654    3432 223456777777763 1           235


Q ss_pred             HHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||++.++|.   ..+.+|+.+.      +++|++++++++
T Consensus       310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~~------~~~e~~~~~~~l  351 (356)
T 1fg7_A          310 VFKSLWDQGIILRDQNKQPSLSGCLRITVG------TREESQRVIDAL  351 (356)
T ss_dssp             HHHHHHHTTEECEECTTSTTCTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEEECCCCCCCCCeEEEEeC------CHHHHHHHHHHH
Confidence            77888899999998442   1368999875      478999999875

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=98.89  E-value=1.1e-08  Score=97.21  Aligned_cols=167  Identities=7%  Similarity=-0.034  Sum_probs=101.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcc---h----HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR---F----VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P---D----i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||++++|+++|..+. ...++.|   |    ++|.++ +| +++|+++++ +++++.+..        ..+
T Consensus       192 ~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~d~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~--------~~~  261 (390)
T 1d2f_A          192 ERHGVRVISDEIHMDMVWGEQPHI-PWSNVARGDWALLTSGSKSFNIPA-LTGAYGIIENSSSRDAYLS--------ALK  261 (390)
T ss_dssp             HHTTCEEEEECTTTTCBCSSSCCC-CGGGTCCSSEEEEECSHHHHTCGG-GCCEEEEECSHHHHHHHHH--------HHH
T ss_pred             HHcCCEEEEEccccccccCCCCCc-CHHHcchhhHhhccCccHhhcccC-hhheEEEECCHHHHHHHHH--------HHh
Confidence            457999999999999988775321 1122322   3    579998 77 499999985 788877653        122


Q ss_pred             -chhh-hcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCC
Q psy7882          76 -KLKI-SDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPL  145 (329)
Q Consensus        76 -g~T~-agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~  145 (329)
                       ..+| +.+ ++++++.+. +    .+++ .++.++..+++.+.|++.   +|.+..+++.| ++..+++....     .
T Consensus       262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~  333 (390)
T 1d2f_A          262 GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA---FPELNWQIPQSTYLAWLDLRPLN-----I  333 (390)
T ss_dssp             TTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCCSBCSEEEEECGGGC-----C
T ss_pred             hhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCEEecCCccEEEEEEccccC-----C
Confidence             3344 445 555444433 2    2222 334455555555555442   44444445555 44467774310     1


Q ss_pred             ChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +   ...+.+.|. ++||++.++..    ..+.+|+.++.     ++++++++++.+
T Consensus       334 ~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-----~~~~l~~~l~~l  382 (390)
T 1d2f_A          334 D---DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-----PRSKLEKGVAGL  382 (390)
T ss_dssp             C---HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             C---HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence            1   345788888 68999987432    25789999875     357899888875

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=98.89  E-value=6.7e-09  Score=99.71  Aligned_cols=168  Identities=7%  Similarity=-0.040  Sum_probs=106.2

Q ss_pred             ccccceEEehhHhhchhccch-hhhhccc----CCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCL----QICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~----GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||+++++.++|. ......+    +....   ++|.++ +| +++|++++++++++.+..        ..+
T Consensus       202 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~  272 (412)
T 2x5d_A          202 KQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR--------IKS  272 (412)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHH--------HHH
T ss_pred             HHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHH--------HHh
Confidence            357999999999999977663 1122222    22222   469998 77 499999999999887764        223


Q ss_pred             chhhhcc-HHHHHHHHh-h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCCh
Q psy7882          76 KLKISDT-VRPHVQIKK-S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~  147 (329)
                      ..+++.+ ++++++.+. +    .+++ .+++++..++|.+.|+++  ....   +++. |+++.+++..+      +..
T Consensus       273 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~g~~~~~~~~~~------~~~  341 (412)
T 2x5d_A          273 YHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA--GWMV---ENPKASMYVWAKIPEP------YAH  341 (412)
T ss_dssp             HHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH--TCCC---CCCSBSSEEEEECCTT------TGG
T ss_pred             hhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC--CCEe---cCCCeeeEEEEEcCCc------cCC
Confidence            3456666 555544433 2    2333 556777777787777765  2222   2333 66777777421      100


Q ss_pred             HHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .-...+.+.|++ +||++.++..    ..+.+|+.++.     ++++++++++.+
T Consensus       342 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l  391 (412)
T 2x5d_A          342 LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-----NRDRLRQAVRGI  391 (412)
T ss_dssp             GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence            013457778765 7999987421    25789999875     478999999875

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=98.89  E-value=9.3e-09  Score=98.89  Aligned_cols=165  Identities=10%  Similarity=-0.018  Sum_probs=101.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhccc----CCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL----QICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~----GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|+||++++|.++|.......+    +....   ++|.++ +| +++|++++++++.+.+..        ..+.
T Consensus       211 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~~~  281 (404)
T 2o1b_A          211 KGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKK--------YQTH  281 (404)
T ss_dssp             TTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH--------HHHH
T ss_pred             HHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHH--------HHhh
Confidence            4679999999999999776632111111    22222   569997 77 599999999999887763        2233


Q ss_pred             hhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+++.+ ++++++.+. +.    +++ .+++++..++|.+.|+++    +. .-++.. |+++.+++...      .+  
T Consensus       282 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~g~~~~~~~~~~------~~--  348 (404)
T 2o1b_A          282 TNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA----DL-PFVHAKGGIYVWLETPPG------YD--  348 (404)
T ss_dssp             HCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CEECCCBSSEEEEECCTT------CC--
T ss_pred             ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CC-eecCCCcceEEEEeCCCC------CC--
Confidence            445556 555544443 22    222 344555556666665553    32 223333 56677777421      11  


Q ss_pred             HHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+.+.|+ ++||++.++..    ..+.+|+.++.     ++++++++++.+
T Consensus       349 -~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-----~~e~l~~~l~~l  396 (404)
T 2o1b_A          349 -SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-----DDQKLDEAAIRL  396 (404)
T ss_dssp             -HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-----CTTHHHHHHHHH
T ss_pred             -HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-----CHHHHHHHHHHH
Confidence             245777777 57999987421    25789999875     356899998875

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=98.87  E-value=2.1e-08  Score=94.33  Aligned_cols=160  Identities=7%  Similarity=-0.041  Sum_probs=103.1

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .+|+++|.||++++|+..+.....+.++....   ++|.++ +| +++|.+++++++.+.+..  ..        .+|+.
T Consensus       177 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--~~--------~~~~~  245 (360)
T 3hdo_A          177 RCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAG-MRIGLAIARPEVIAALDK--IR--------DHYNL  245 (360)
T ss_dssp             HBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTT-SCCEEEECCHHHHHHHHH--HS--------CSCCS
T ss_pred             HCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCc-cceeeEeeCHHHHHHHHH--hC--------CCCCC
Confidence            46899999999999854433333334444444   569997 66 599999999999988764  11        22445


Q ss_pred             c-HHHHHHHH---h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          82 T-VRPHVQIK---K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        82 n-lA~aaala---~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      + ++++++.+   . +.+++ .++.++..+++.+.|+++    + +..+.+.|.++.+.+...          -...+.+
T Consensus       246 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~~~~~~~~~~~~~----------~~~~l~~  310 (360)
T 3hdo_A          246 DRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI----G-YDVIPSQGNYLFATPPDR----------DGKRVYD  310 (360)
T ss_dssp             CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT----T-CEECCCSSSEEEEECTTC----------CHHHHHH
T ss_pred             CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----C-CEEcCCCccEEEEECCCC----------CHHHHHH
Confidence            5 44444333   3 33333 455666666666666554    3 223456777777765311          1345778


Q ss_pred             HHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.+++.  ..+.+|+...      +++|+|++++++
T Consensus       311 ~l~~~gi~v~~~~~~~~~~~iRis~~------~~~e~~~l~~al  348 (360)
T 3hdo_A          311 GLYARKVLVRHFSDPLLAHGMRISIG------TREEMEQTLAAL  348 (360)
T ss_dssp             HHHHTTEECBCCCSTTTTTSEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHCCEEEEECCCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence            89999999987542  3478898743      589999999975

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=98.87  E-value=8.5e-09  Score=99.04  Aligned_cols=164  Identities=10%  Similarity=-0.033  Sum_probs=103.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCc-ch-----HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-----VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-----i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|+||++++++++|..... ..++. .|     ++|.++ +| +++|++++++ ++++.+..        ..+.
T Consensus       204 ~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~--------~~~~  273 (409)
T 2gb3_A          204 ERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVVIDSVSKKFSACG-ARVGCLITRNEELISHAMK--------LAQG  273 (409)
T ss_dssp             HHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHH--------HHHH
T ss_pred             HHcCCEEEEECcccccccCCCCCCc-cccCCCCEEEEecchhccCCcc-ceEEEEEECcHHHHHHHHH--------HHhc
Confidence            3579999999999999877754333 22332 35     469997 66 5999999999 88887653        1122


Q ss_pred             hhhhcc-HHHHH---HHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          77 LKISDT-VRPHV---QIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        77 ~T~agn-lA~aa---ala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .+ +.+ +++++   +++.  +.+++ .+++++..+++.+.|+++  ....+ ....-|++..+.+. +.      +   
T Consensus       274 ~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~-~~~~~~~~~~~~~~-~~------~---  339 (409)
T 2gb3_A          274 RL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH--GLKRF-TKPSGAFYITAELP-VE------D---  339 (409)
T ss_dssp             SC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCB-CCCSBSSEEEEECS-SS------C---
T ss_pred             cC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc--Cceee-eCCCeeEEEEEEeC-CC------C---
Confidence            22 344 44433   3322  22333 456667777777777664  22220 11223666666663 11      1   


Q ss_pred             HHHHHHHHHHC------CceeeccC-------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEH------GLLLGRGG-------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~------GVLl~~~G-------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++      ||++.+..       ...+.+|+.++  .   ++++++++++++
T Consensus       340 ~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~---~~e~i~~~~~~l  395 (409)
T 2gb3_A          340 AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--L---EKDLLSRAIDVL  395 (409)
T ss_dssp             HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--S---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--C---CHHHHHHHHHHH
Confidence            34577888887      99998742       12578999988  3   588999999975

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=98.86  E-value=6.3e-09  Score=98.11  Aligned_cols=164  Identities=11%  Similarity=0.004  Sum_probs=105.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhccc-CCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCL-QICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~-GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..||+++|.||+++++.+.|.......+ +..+ |     ++|.++ .| +++|++++++++++.+..        ..++
T Consensus       180 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~  250 (370)
T 2z61_A          180 YENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTG-WRIGYVISNDEIIEAILK--------LQQN  250 (370)
T ss_dssp             HHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHH
T ss_pred             HHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCcc-ceEEEEEECHHHHHHHHH--------HHhh
Confidence            3579999999999998777654333333 1222 3     469997 67 499999999999887763        2344


Q ss_pred             hhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+++.+ ++++++.+. +.     +++ .+++++..+++.+.|+++  ....+.  ..-|+++.+++..           
T Consensus       251 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~-----------  315 (370)
T 2z61_A          251 LFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF--GWEVNN--PIGAYYVFPNIGE-----------  315 (370)
T ss_dssp             HTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCBCCC--CCBTTEECCBCSS-----------
T ss_pred             cccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc--CCeecC--CCcceEEEEecCC-----------
Confidence            556666 666555444 32     222 455667777777777664  222211  1225555555531           


Q ss_pred             HHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      -...+.+.|. ++||++.++..    ..+.+|+.++  .   ++++|+++++++
T Consensus       316 ~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~---~~~~i~~~~~~l  364 (370)
T 2z61_A          316 DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--N---SYENIKEGLERI  364 (370)
T ss_dssp             CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--S---CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--C---CHHHHHHHHHHH
Confidence            0245778887 78999987421    2578999988  2   578999999874

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=98.85  E-value=1.9e-08  Score=96.03  Aligned_cols=161  Identities=12%  Similarity=-0.016  Sum_probs=101.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTST-CTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~-eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||+++++...- ..   .++  +|     ++|.++|+..++ |++++++ ++++.+..        ..++.
T Consensus       164 ~~~~~~li~De~~~~~~~~~-~~---~~~--~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~--------~~~~~  229 (386)
T 1cs1_A          164 REVGAVSVVDNTFLSPALQN-PL---ALG--ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW--------WANNI  229 (386)
T ss_dssp             HHTTCEEEEECTTTCTTTCC-GG---GGT--CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH--------HHHHH
T ss_pred             HHcCCEEEEECCCcccccCC-cc---ccC--ceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH--------HHHhc
Confidence            35799999999999886531 11   233  55     569998776455 8888886 78877653        23344


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEee
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLV  136 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~  136 (329)
                      +++.+ ++++++++. +.++. .++..+..+.+.+.|++    ++.+.+                  ++|.|.|+++++.
T Consensus       230 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~----~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  305 (386)
T 1cs1_A          230 GVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQT----QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD  305 (386)
T ss_dssp             TCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT----CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred             CCCCCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC
Confidence            44556 666655554 43332 33344444444444433    222221                  3677999999984


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeec--cC--------------------------CCCCEEEEeCccccCcCCHH
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGR--GG--------------------------LSGNTLTALQPKLLNYWTDF  188 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~--~G--------------------------~~~nvIrl~PPL~It~~t~e  188 (329)
                      ..           ...+...+.++||++..  .|                          ...+.+|+.|++   +++++
T Consensus       306 ~~-----------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~  371 (386)
T 1cs1_A          306 GD-----------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGED  371 (386)
T ss_dssp             SC-----------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHH
T ss_pred             CC-----------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHH
Confidence            21           23466777889998864  12                          125899999998   34788


Q ss_pred             HHHHHHhcc
Q psy7882         189 VGTPCLDCE  197 (329)
Q Consensus       189 eId~~l~~~  197 (329)
                      +|+.+.+++
T Consensus       372 ~i~~l~~al  380 (386)
T 1cs1_A          372 LIADLENGF  380 (386)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888888774

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=98.85  E-value=2.5e-08  Score=94.34  Aligned_cols=161  Identities=9%  Similarity=-0.097  Sum_probs=103.5

Q ss_pred             ccccceEEehhHhhchhc--cc-hhhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGD--NG-TYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR--TG-~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||+++++..  ++ .++.. .+++.++   ++|.++ .| +++|++++++++++.+..        ..+..
T Consensus       182 ~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~  251 (381)
T 1v2d_A          182 RAHDLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATG-YRVGWIVGPKEFMPRLAG--------MRQWT  251 (381)
T ss_dssp             HHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGG-GCCEEEECCTTTHHHHHH--------HHHHH
T ss_pred             HHcCCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHH--------HHhhc
Confidence            357999999999998843  22 23333 4566666   679997 66 599999999999887753        12234


Q ss_pred             hhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          78 KISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        78 T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +++.+ ++++++.+. +.      +++ .++++++.++|.+.|+++  ....+..  .-|+++.+++..         .+
T Consensus       252 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~---------~~  318 (381)
T 1v2d_A          252 SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM--GLRVYVP--EGTYFLMAELPG---------WD  318 (381)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT--TCCEECC--SBSSEEEEECTT---------CC
T ss_pred             ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC--CCEecCC--CcceEEEEecCh---------Hh
Confidence            45555 444444333 22      222 556777777787777763  2222111  126667676632         01


Q ss_pred             HHHHHHHHHHHCCceeeccCC------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          +...+.++||++.++..      ..+.+|+.++.     ++++++++++++
T Consensus       319 ----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-----~~~~i~~~~~~l  364 (381)
T 1v2d_A          319 ----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-----TEEELHLALERL  364 (381)
T ss_dssp             ----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             ----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-----CHHHHHHHHHHH
Confidence                55667899999987421      35789999864     478999999874

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=98.83  E-value=1.2e-08  Score=96.97  Aligned_cols=170  Identities=12%  Similarity=0.028  Sum_probs=105.1

Q ss_pred             ccccceEEehhHhhc-hhccchhhhhcccCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFG-SGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTG-fGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||++++ +...|....  ... .+|     ++|+|+|+  ..|+++++ +++++.+..  ..     .++.
T Consensus       188 ~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~~~s~sK~l~g~--~~G~~~~~~~~~~~~l~~--~~-----~~~~  255 (407)
T 2dkj_A          188 DEVGAYLVVDMAHFAGLVAAGLHPN--PLP-YAHVVTSTTHKTLRGP--RGGLILSNDPELGKRIDK--LI-----FPGI  255 (407)
T ss_dssp             HHHTCEEEEECTTTHHHHHTTCSCC--CTT-TCSEEEEESSGGGCCC--SCEEEEESCHHHHHHHHH--HH-----TTTT
T ss_pred             HHcCCEEEEEccccccccccCccCC--ccc-cccEEEEeccccCCCC--CceEEEECCHHHHHHHHh--hh-----cccc
Confidence            457999999999986 544554221  111 267     46999876  46999999 788887653  11     1222


Q ss_pred             hhhcc-HHHH---HHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          78 KISDT-VRPH---VQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        78 T~agn-lA~a---aala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +.+.+ ..++   ++++.   +.+++ .++.+++.+++.+.|+++  ..+.+.. ++.|.++.+++....     .   -
T Consensus       256 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~~-----~---~  324 (407)
T 2dkj_A          256 QGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR--GYRIVTG-GTDNHLFLVDLRPKG-----L---T  324 (407)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG-SCSSSEEEEECGGGT-----C---C
T ss_pred             cCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC--CceeecC-CCCceEEEEECcccC-----C---C
Confidence            22333 2232   33322   12233 677888888888888775  2222221 456888888885311     0   1


Q ss_pred             HHHHHHHHHHCCceeeccCC--------CCCEEEEeCcccc-CcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGL--------SGNTLTALQPKLL-NYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~--------~~nvIrl~PPL~I-t~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++.++..        .++.+|+.++... ...+++|++++++++
T Consensus       325 ~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l  381 (407)
T 2dkj_A          325 GKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELI  381 (407)
T ss_dssp             HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHH
Confidence            34577888899999987421        2568999987641 012578999999985

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=98.83  E-value=2e-08  Score=94.95  Aligned_cols=165  Identities=8%  Similarity=-0.004  Sum_probs=109.6

Q ss_pred             ccccceEEehhHh-hch-hccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVD-FGS-GDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGf-GRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+||+++|.||++ .|+ +++|..+. +.++..||     ++|.++.   |.|.+++++++++.+..  ..    ..+..
T Consensus       195 ~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~--~~----~~~~~  264 (384)
T 1bs0_A          195 QQHNGWLMVDDAHGTGVIGEQGRGSC-WLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQ--FA----RHLIY  264 (384)
T ss_dssp             HHTTCEEEEECTTTTTTSSGGGCCHH-HHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHH--HC----HHHHS
T ss_pred             HHcCcEEEEECCcccceecCCCCchH-HhcCCCCcEEEeeccchhhc---cCcEEEeCHHHHHHHHH--hc----hhhhc
Confidence            4679999999998 464 66766443 56777899     4598862   55888899998887653  10    01222


Q ss_pred             hhhcc-HHHHHHHHh-hHHh-----H-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChH
Q psy7882          78 KISDT-VRPHVQIKK-SVLE-----R-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile-----~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      |++.+ ++++++.+. +.++     + .++++++.+++.+.|+++    +.  .+. +.|.++.+.+..         ..
T Consensus       265 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~--~~~~~~~~~~~~~~~~---------~~  329 (384)
T 1bs0_A          265 STSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL----PF--TLADSCSAIQPLIVGD---------NS  329 (384)
T ss_dssp             SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS----SC--EECSCCSSBCCEEEES---------HH
T ss_pred             CCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc----CC--cccCCCCCEEEEEeCC---------HH
Confidence            33455 666555544 3332     3 566777777777777654    32  233 567787787742         12


Q ss_pred             HHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|.++||++.+...     ..+.+|+.++...   +++|++++++++
T Consensus       330 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~---~~~~i~~~~~~l  380 (384)
T 1bs0_A          330 RALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAH---EMQDIDRLLEVL  380 (384)
T ss_dssp             HHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCC---CHHHHHHHHHHH
Confidence            345688899999999987532     1368999988655   589999999875

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=98.82  E-value=1.5e-08  Score=95.94  Aligned_cols=167  Identities=12%  Similarity=0.024  Sum_probs=105.1

Q ss_pred             ccccceEEehhHhhchhccch-hhhhccc-CC-cch-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCL-QI-CRF-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~-GV-~PD-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||+++++.++|. ......+ ++ ..|     ++|.++ .| +++|.+++++++++.+..        ..+
T Consensus       190 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~  260 (389)
T 1gd9_A          190 VEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVK--------FQM  260 (389)
T ss_dssp             HHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHT
T ss_pred             HHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHH--------HHh
Confidence            357999999999999987765 3333333 22 235     469997 66 599999999999887764        223


Q ss_pred             chhhhcc-HHHHHHHHh-h------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          76 KLKISDT-VRPHVQIKK-S------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      +.+++.+ ++++++.+. +      .+++ .+++++..++|.+.|+++  ....+.  ..-|+++.+++....     .+
T Consensus       261 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~~-----~~  331 (389)
T 1gd9_A          261 YNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM--GLPTVK--PKGAFYIFPRIRDTG-----LT  331 (389)
T ss_dssp             TTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCC--CCBTTEECCBCGGGT-----CC
T ss_pred             hhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc--CCeecC--CCeeeEEEEeccCCC-----CC
Confidence            3445555 444443333 2      2333 456667777777777664  222221  123555655653200     11


Q ss_pred             hHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+.+.|. ++||++.+...    ..+.+|+.++.     ++++++++++.+
T Consensus       332 ---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-----~~~~i~~~l~~l  379 (389)
T 1gd9_A          332 ---SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-----AYEKLEEAMDRM  379 (389)
T ss_dssp             ---HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-----CHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence               345788887 89999987421    25789999762     578999999875

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=98.82  E-value=5.8e-08  Score=91.27  Aligned_cols=169  Identities=10%  Similarity=0.008  Sum_probs=103.6

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCC---------
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK---------   71 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~---------   71 (329)
                      .+|+++|+||+++ +|.+.    .......+|     ++|.+.||. ++|++++++++++.+.....+...         
T Consensus       186 ~~~~~li~Dea~~-~g~~~----~~~~~~~~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  259 (390)
T 1elu_A          186 NYPVRVLVDGAQS-AGSLP----LDFSRLEVDYYAFTGHKWFAGPA-GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEP  259 (390)
T ss_dssp             SSCCEEEEECTTT-BTTBC----CCTTTSCCSEEEEESSSTTCCCT-TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCE
T ss_pred             hcCcEEEEEcccc-cCCcC----CChhhcCCCEEEccccccccCCC-ceEEEEECHHhHhhcCCccccCCcccccccCcc
Confidence            6899999999997 55442    112234577     459888884 799999999888765420000000         


Q ss_pred             ----CCccch-hhhcc-HHHH---HHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---EeeceeeEEE
Q psy7882          72 ----TPAHKL-KISDT-VRPH---VQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---RGKGLMIGVD  134 (329)
Q Consensus        72 ----~~~hg~-T~agn-lA~a---aala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---RG~GLm~gIe  134 (329)
                          ...+.. +.+.+ .+++   ++++.    +.+++ .++.+++.+++.+.|+++    +.+.-+   ++.|.|+.++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~  335 (390)
T 1elu_A          260 TGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQL----PHVHCLATSAPQAGLVSFT  335 (390)
T ss_dssp             EEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS----TTEEESCSSCCSSSEEEEE
T ss_pred             cccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc----CCcEEecCccccccEEEEE
Confidence                000011 11223 3333   33332    11333 566777777777777654    222212   4678888888


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +..+.      +   ...+.+.|.++||++.+.. ..+.+|+.+++..   +++|++++++++
T Consensus       336 ~~~~~------~---~~~~~~~l~~~gi~v~~~~-~~~~iRis~~~~~---~~~~i~~~~~~l  385 (390)
T 1elu_A          336 VDSPL------G---HRAIVQKLEEQRIYLRTIA-DPDCIRACCHYIT---DEEEINHLLARL  385 (390)
T ss_dssp             ECSSS------C---HHHHHHHHHHTTEECEEET-TTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             cCCCC------C---HHHHHHHHHHCCEEEEecC-CCCeEEEecccCC---CHHHHHHHHHHH
Confidence            74211      1   3457888889999998753 3589999998776   589999999875

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=98.81  E-value=2.9e-08  Score=95.71  Aligned_cols=170  Identities=9%  Similarity=-0.074  Sum_probs=106.7

Q ss_pred             ccccceEEehhHhhchhccchh----hhhccc----CCcch-------HHHhhc-CCccccceeee-chhHHHhhhhhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY----LGFQCL----QICRF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKY   67 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~----fA~e~~----GV~PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~   67 (329)
                      ..+|+++|+||++++++++|..    ++....    ++.||       ++|+++ .| +++|++++ ++++.+.+..  .
T Consensus       218 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~--~  294 (428)
T 1iay_A          218 NQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARK--M  294 (428)
T ss_dssp             HTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHH--H
T ss_pred             HHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHH--H
Confidence            3679999999999998766532    222211    34477       469997 77 59999998 6788877653  1


Q ss_pred             ccCCCCccchhhhcc-HHHHHHHHh----h----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEee
Q psy7882          68 QILKTPAHKLKISDT-VRPHVQIKK----S----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLV  136 (329)
Q Consensus        68 ~~~~~~~hg~T~agn-lA~aaala~----~----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~  136 (329)
                              ..+++.+ ++++++.+.    +    .+++ .+++++..++|.+.|+++    +. .-+++ .|.++.+++.
T Consensus       295 --------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~g~~~~~~~~  361 (428)
T 1iay_A          295 --------SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV----GI-KCLKNNAGLFCWMDLR  361 (428)
T ss_dssp             --------HTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CBCCCSSSSEEEEECG
T ss_pred             --------HhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CC-cccCCCeeEEEEEech
Confidence                    1123344 444444332    2    1222 556667777777777664    22 11234 5778888885


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHC-CceeeccCCC----CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEH-GLLLGRGGLS----GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G~~----~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....  .+ .......+.+.|.++ ||++.+++..    ++.+|+.++ ..   ++++++++++++
T Consensus       362 ~~~~--~~-~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~---~~e~i~~~~~~l  420 (428)
T 1iay_A          362 PLLR--ES-TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NM---DDGTVDIALARI  420 (428)
T ss_dssp             GGCS--SS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SS---CHHHHHHHHHHH
T ss_pred             hhcC--CC-chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cC---CHHHHHHHHHHH
Confidence            3210  00 112345688888886 9999875321    468999987 33   689999999875

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=98.30  E-value=4.9e-10  Score=106.93  Aligned_cols=172  Identities=7%  Similarity=-0.068  Sum_probs=102.4

Q ss_pred             cccccceEEehhHhhchhccch----hhhhcc--cCCcch---HHHhhc-CCccccceeeech-hHHHhhhhhhhccCCC
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGT----YLGFQC--LQICRF---VQKDFK-GSFWDKLIVHTST-CTFENFIKIKYQILKT   72 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~----~fA~e~--~GV~PD---i~KaLg-GG~~PigAv~~~~-eI~d~~~~~~~~~~~~   72 (329)
                      -..||+++|+||++++|+++|.    ++++..  .+..++   ++|+++ +| +++|++++++ ++++.+..        
T Consensus       193 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~--------  263 (392)
T 3b1d_A          193 CQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKH--------  263 (392)
Confidence            3467999999999999988773    333322  344455   579998 77 4999999875 48776653        


Q ss_pred             Cccchhh-hcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceeeEEeeceeeE-EEeecCCCCCCCCC
Q psy7882          73 PAHKLKI-SDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGDVRGKGLMIG-VDLVQDKETKVPLN  146 (329)
Q Consensus        73 ~~hg~T~-agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~VRG~GLm~g-Ief~~d~~~~~p~~  146 (329)
                      ..+..++ +.+ ++++++.+. +..++ ++++.+.....++.|.+..++ +|.+..+++.|.|+. +++....       
T Consensus       264 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~-------  336 (392)
T 3b1d_A          264 QQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYG-------  336 (392)
Confidence            2223333 335 555544443 21111 334444444444444444333 444555677777665 6764210       


Q ss_pred             hHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .....+.+.|+ ++||++.++..    ..+.+|+..  ..   ++++|+++++++
T Consensus       337 -~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~---~~e~i~~~l~~l  386 (392)
T 3b1d_A          337 -LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNI--AA---PKSLVEEICKRI  386 (392)
Confidence             01235777786 78999987421    245788763  22   367899988875

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=98.80  E-value=1.7e-08  Score=95.77  Aligned_cols=169  Identities=9%  Similarity=-0.025  Sum_probs=104.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..||+++|+||+++ +|+++..  ....++ .+|     ++|+++|+. . |++++++++++.+..  .      .++.+
T Consensus       188 ~~~~~~li~Dea~~-~g~~~~~--~~~~~~~~~di~~~s~sK~~~g~~-g-G~~~~~~~~~~~l~~--~------~~~~~  254 (405)
T 2vi8_A          188 DEVGAYLMVDMAHI-AGLVAAG--LHPNPVPYAHFVTTTTHKTLRGPR-G-GMILCQEQFAKQIDK--A------IFPGI  254 (405)
T ss_dssp             HHHTCEEEEECTTT-HHHHHTT--SSCCSTTTCSEEEEESSSTTCCCS-C-EEEEECHHHHHHHHH--H------HTTTT
T ss_pred             HHcCCEEEEEcccc-ccccccC--cCCCccccCCEEEEeccccCCCCC-C-eEEEEcHHHHHHHHh--h------hcccc
Confidence            35799999999999 6665431  122333 477     359998753 4 888899888887653  1      01112


Q ss_pred             hhc-c-HHHH---HHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          79 ISD-T-VRPH---VQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        79 ~ag-n-lA~a---aala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +++ + ..++   ++++.   +.+++ .++++++.++|.+.|+++  ..+.+.. ++.|.++.+.+....     .+   
T Consensus       255 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~~-----~~---  323 (405)
T 2vi8_A          255 QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE--GFTLVSG-GTDNHLLLVDLRPQQ-----LT---  323 (405)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG-SCSSSEEEEECGGGT-----CC---
T ss_pred             cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeEecC-CCCceEEEEEccCCC-----CC---
Confidence            222 2 2222   33322   12233 677888888998888875  2222211 245788888885311     01   


Q ss_pred             HHHHHHHHHHCCceeeccC-------C-CCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG-------L-SGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G-------~-~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++.++.       . .++.+|+.++...+ .++++|++++++++
T Consensus       324 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l  380 (405)
T 2vi8_A          324 GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII  380 (405)
T ss_dssp             HHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHH
Confidence            3457778889999998731       1 24689999987321 34689999999985

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=98.80  E-value=3.6e-08  Score=92.64  Aligned_cols=172  Identities=11%  Similarity=0.011  Sum_probs=104.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA-----   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~-----   74 (329)
                      ..||+++|+||+++ +|  +..+..+.++  +|     ..|+++|+. ++|++++++++++.+....... ..+.     
T Consensus       175 ~~~~~~li~De~~~-~g--~~~~~~~~~~--~d~~~~s~sK~~~~~~-g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  247 (393)
T 3kgw_A          175 HRYQCLLLVDSVAS-LG--GVPIYMDQQG--IDIMYSSSQKVLNAPP-GISLISFNDKAKYKVYSRKTKP-VSFYTDITY  247 (393)
T ss_dssp             HHTTCEEEEECTTT-TT--TSCCCTTTTT--CCEEEEESSSTTCCCS-SCEEEEECHHHHHHHHTCSSCC-SCSTTCHHH
T ss_pred             HHcCCEEEEECCcc-cc--CcccchhhcC--CCEEEecCcccccCCC-ceeEEEECHHHHHHHhccCCCC-CceeecHHH
Confidence            46799999999987 22  2233334444  45     349998874 8999999999988775310000 0000     


Q ss_pred             ----------cc-hhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEE
Q psy7882          75 ----------HK-LKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGV  133 (329)
Q Consensus        75 ----------hg-~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gI  133 (329)
                                +. .+++.+ .++++..+. +.     +++ .+++.++.+++.+.|+++  .....  ......+.+..+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~  325 (393)
T 3kgw_A          248 LAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM--GLKFFVKDPEIRLPTITTV  325 (393)
T ss_dssp             HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSSSGGGBCSSEEEE
T ss_pred             HHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcCCeEEEE
Confidence                      00 112223 333333222 32     233 667788888888888776  22221  112234566777


Q ss_pred             EeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         134 DLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       134 ef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      .+....         ....+.+.|.++ ||++.++.  ..++.+|+.+ ++++   +++|++++++++
T Consensus       326 ~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~---~~~~i~~~~~~l  381 (393)
T 3kgw_A          326 TVPAGY---------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNA---TTENVDRVAEAL  381 (393)
T ss_dssp             ECCTTB---------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGC---CHHHHHHHHHHH
T ss_pred             eCCCCC---------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCC---CHHHHHHHHHHH
Confidence            764211         134578888887 99998642  2467999998 8876   479999999985

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=98.80  E-value=1.2e-08  Score=96.63  Aligned_cols=167  Identities=5%  Similarity=-0.062  Sum_probs=103.0

Q ss_pred             ccccceEEehhHhhchhccch----hhhhcc--cCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQC--LQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~--~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|+||+++++.+.|.    ++.+..  ++..++   ++|.++ .| +++|.+++++++++.+..        ..
T Consensus       193 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~  263 (388)
T 1j32_A          193 VEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATK--------IQ  263 (388)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHH--------HH
T ss_pred             HHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHH--------HH
Confidence            357999999999999977663    222211  334444   579997 67 499999999999887753        22


Q ss_pred             cchhhhcc-HHHHHHHHh-----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCC
Q psy7882          75 HKLKISDT-VRPHVQIKK-----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        75 hg~T~agn-lA~aaala~-----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~  146 (329)
                      ++++++.+ ++++++++.     +.+++ .+++++..++|.+.|+++    +.+.-+... |++..+.+....     .+
T Consensus       264 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~-----~~  334 (388)
T 1j32_A          264 GHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM----PGLECPKPDGAFYMFPSIAKTG-----RS  334 (388)
T ss_dssp             HTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC----TTCBCCCCCBTTEECCBCGGGT-----CC
T ss_pred             hhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC----CCCcccCCCeeEEEEEecCCCC-----CC
Confidence            34455556 555443332     22333 556667777777776553    322222233 444444442100     01


Q ss_pred             hHHHHHHHHHHHH-CCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKE-HGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e-~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+...|.+ +||++.+...  ..+.+|+.++  .   ++++++++++.+
T Consensus       335 ---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~---~~~~i~~~~~~l  380 (388)
T 1j32_A          335 ---SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--T---DLDTIKRGMERL  380 (388)
T ss_dssp             ---HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--S---CHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--C---CHHHHHHHHHHH
Confidence               3457788876 7999987421  1578999975  2   689999999875

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=98.79  E-value=3.5e-08  Score=93.94  Aligned_cols=166  Identities=8%  Similarity=-0.011  Sum_probs=107.5

Q ss_pred             ccccceEEehhHhh-c-hhccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|.||++. | ++++|..+ .+.+++.  ||     ++|.++.   |-|.+++++++++.+...  .    ..+
T Consensus       200 ~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~--~----~~~  269 (398)
T 3a2b_A          200 NEFDAAVMVDDAHSLGVIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLAS---LGGFVAGDADVIDFLKHN--A----RSV  269 (398)
T ss_dssp             HHHTCEEEEECTTTTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCS---SCEEEEECHHHHHHHHHH--C----HHH
T ss_pred             HHcCcEEEEECCCcccccCCCCCch-HhhcCCCcCCeEEEecccccccC---CCcEEEeCHHHHHHHHHh--c----ccc
Confidence            35799999999995 5 45666433 4556765  57     4699873   116688899888876530  0    012


Q ss_pred             chhhhcc-HHHH---HHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPH---VQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~a---aala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      ..+...+ +.++   ++++. +.+++ .++.++..+++.+.|+++  ..+.   +++.|.++.+.+..         ...
T Consensus       270 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~g~~~~~~~~~---------~~~  335 (398)
T 3a2b_A          270 MFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH--GFDL---GATESPILPIFIRS---------NEK  335 (398)
T ss_dssp             HSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT--TCCB---CSCCSSEEEEECCC---------HHH
T ss_pred             eecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc--CCCc---CCCCCCEEEEEcCC---------HHH
Confidence            2233333 3332   33333 22223 677888888888888875  2332   23558888888742         122


Q ss_pred             HHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++.+...     ..+.+|+.++..+   +++|++++++++
T Consensus       336 ~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~---~~e~i~~~~~~l  385 (398)
T 3a2b_A          336 TFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATH---TYDQIDEAIEKM  385 (398)
T ss_dssp             HHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCC---CHHHHHHHHHHH
Confidence            45688899999999987532     2478999988755   589999999985

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=98.78  E-value=3.2e-08  Score=96.04  Aligned_cols=164  Identities=8%  Similarity=-0.098  Sum_probs=101.3

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccC----Ccch---HHHhhc-CCccccceeeechhHHHh--------hhhhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQ----ICRF---VQKDFK-GSFWDKLIVHTSTCTFEN--------FIKIKY   67 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~G----V~PD---i~KaLg-GG~~PigAv~~~~eI~d~--------~~~~~~   67 (329)
                      .+||+++|+||++++|++.|.. .....+.    +..+   ++|+++ .| +++|++++++++++.        +..   
T Consensus       239 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~---  314 (449)
T 3qgu_A          239 RKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNR---  314 (449)
T ss_dssp             HHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHH---
T ss_pred             HHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHH---
Confidence            3679999999999999887632 2233332    2233   579998 78 499999999988752        221   


Q ss_pred             ccCCCCccchhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecC
Q psy7882          68 QILKTPAHKLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQD  138 (329)
Q Consensus        68 ~~~~~~~hg~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d  138 (329)
                           ..+..+++.+ ++++++++. +.     +++ .+++++..++|.+.|+++    +. .-+.. .|.++.+.+. +
T Consensus       315 -----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~-~  383 (449)
T 3qgu_A          315 -----VMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM----GF-SVYGGDDAPYIWVGFP-G  383 (449)
T ss_dssp             -----HHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CEEESSSSSEEEEECT-T
T ss_pred             -----HhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC----CC-eeeCCCCeeEEEEECC-C
Confidence                 1122233455 666555544 22     222 455666666777666654    32 22233 3666777764 1


Q ss_pred             CCCCCCCChHHHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .      +   ...+...|+++ ||++.++.    ...+.+||.  +..   ++++|+++++++
T Consensus       384 ~------~---~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~~~---~~e~i~~~l~~l  433 (449)
T 3qgu_A          384 K------P---SWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--AFG---SRENILEAVRRF  433 (449)
T ss_dssp             S------C---HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             C------C---HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--ecC---CHHHHHHHHHHH
Confidence            1      1   24577777775 99998742    135789987  433   689999999975

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=98.77  E-value=7.5e-08  Score=90.39  Aligned_cols=170  Identities=9%  Similarity=-0.010  Sum_probs=97.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH------   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h------   75 (329)
                      .+||+++|.||+++++++.   +..+.+|+...   .+|.++|+ .++|++++++++.+.+..  ......+.+      
T Consensus       171 ~~~~~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  244 (376)
T 3f0h_A          171 KKNNMFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACP-PGISVIVLAPRGVERVEK--SKVRTMYFDLKDALK  244 (376)
T ss_dssp             HHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCC-SSCEEEEECHHHHHHHHT--CCCCCSTTCHHHHHH
T ss_pred             HHcCCEEEEEcCccccCcc---ccccccCccEEEecCcccccCC-CceEEEEECHHHHHHhhc--CCCCceeecHHHHHh
Confidence            3579999999999987664   34455666444   45999876 488999999999887653  000000000      


Q ss_pred             -----chhhhccH-HHHHHHHh-hHH------hH-HHHHHHHHHHHHHHHHHHHHhCCce-eeEEeeceeeEEEeecCCC
Q psy7882          76 -----KLKISDTV-RPHVQIKK-SVL------ER-FVHTYVVGNFLLTHLSKLREEFAIV-GDVRGKGLMIGVDLVQDKE  140 (329)
Q Consensus        76 -----g~T~agnl-A~aaala~-~il------e~-le~v~~lG~~L~~gL~eL~~~~p~v-~~VRG~GLm~gIef~~d~~  140 (329)
                           +..++.+. +++++.+. +.+      ++ .++.+++.+++.+.|+    +.+.. ..-...+.++.+..  +. 
T Consensus       245 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~--~~-  317 (376)
T 3f0h_A          245 NQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIK----DLPFELVSESPANGVTSVHP--TT-  317 (376)
T ss_dssp             HHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT----TSSEEECCSSBBTTEEEEEE--SS-
T ss_pred             hcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----HcCCccCccccCceEEEEeC--CC-
Confidence                 11222232 22222222 322      22 3344444444444443    33421 11012233333332  11 


Q ss_pred             CCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          .   ....+.+.|.++ ||++.+..  ..++.+|+.|++.+   |++|++++++++
T Consensus       318 ----~---~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~---t~e~i~~~~~~l  367 (376)
T 3f0h_A          318 ----A---NAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGAL---THEDNTTLVNAF  367 (376)
T ss_dssp             ----S---CHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSC---CHHHHHHHHHHH
T ss_pred             ----C---CHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCC---CHHHHHHHHHHH
Confidence                0   134688888888 99998742  24689999998876   589999999985

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=98.76  E-value=6e-08  Score=93.53  Aligned_cols=169  Identities=7%  Similarity=-0.101  Sum_probs=100.2

Q ss_pred             ccceEEehhHhhchhccchh-hhh--cccCCcc----h-----HHHhhc-CCccccceeee---chhHHHhhhhhhhccC
Q psy7882           7 RDCGVVVSAVDFGSGDNGTY-LGF--QCLQICR----F-----VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQIL   70 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~-fA~--e~~GV~P----D-----i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~   70 (329)
                      ||+++|+||++++|.+.|.. ...  ...++.+    +     ++|.++ .| +++|++++   ++++.+.+......  
T Consensus       226 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~--  302 (430)
T 2x5f_A          226 TKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKG--  302 (430)
T ss_dssp             CEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHH--
T ss_pred             CCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhh--
Confidence            89999999999999877641 111  1112222    3     579997 67 59999999   99998877531000  


Q ss_pred             CCCccchhhhcc-HHHHHHHHh-h----HHhHH----HHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCC
Q psy7882          71 KTPAHKLKISDT-VRPHVQIKK-S----VLERF----VHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDK  139 (329)
Q Consensus        71 ~~~~hg~T~agn-lA~aaala~-~----ile~l----e~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~  139 (329)
                        ..++.+++.+ ++++++.+. +    .++++    ++.++..++|.+.|++.....+ +.-+... |+++.+++. +.
T Consensus       303 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~~~g~~~~~~~~-~~  378 (430)
T 2x5f_A          303 --LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDFNSGYFMAIKVH-DV  378 (430)
T ss_dssp             --HHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCCCBSSEEEEEES-SS
T ss_pred             --hhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCCCceEEEEeCCC-CC
Confidence              1223556666 555444333 3    33222    2233333444444332110223 2222333 566777774 11


Q ss_pred             CCCCCCChHHHHHHHHHHHH-CCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         140 ETKVPLNSRHMTHILDSCKE-HGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~e-~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                            +   ...+.+.|.+ +||++.+.  ..+.+|+.++.+    ++++++++++++
T Consensus       379 ------~---~~~~~~~l~~~~gi~v~~g--~~~~iRis~~~~----~~e~i~~~~~~l  422 (430)
T 2x5f_A          379 ------D---PEALRKHLIDKYSIGVIAL--NATDIRIAFSCV----EKDDIPHVFDSI  422 (430)
T ss_dssp             ------C---HHHHHHHHHHHHCEECEEC--SSSEEEEEGGGS----CGGGHHHHHHHH
T ss_pred             ------C---HHHHHHHHHHhCCEEEecC--CCCeEEEEEecC----CHHHHHHHHHHH
Confidence                  1   2457888887 99999885  357899998863    467899999875

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=98.75  E-value=3.6e-08  Score=93.46  Aligned_cols=164  Identities=8%  Similarity=-0.124  Sum_probs=99.1

Q ss_pred             ccccceEEehhHhhchhccc-hhhhhc--------ccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG-TYLGFQ--------CLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG-~~fA~e--------~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~   71 (329)
                      ..||+++|.||++++|.++| ..++..        .++...+   ++|+++ .| +++|.+++++++.+.+..       
T Consensus       198 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~-------  269 (396)
T 3jtx_A          198 DKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLL-------  269 (396)
T ss_dssp             HHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHH-------
T ss_pred             HHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHH-------
Confidence            35799999999999998877 333221        1344444   579865 45 599999999999887764       


Q ss_pred             CCccchhhhcc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882          72 TPAHKLKISDT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        72 ~~~hg~T~agn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~  145 (329)
                       ..+..+++.+ ++++++.+.    +.+++ .++.++.-+++.+.|++    +..+... .-|+++.+++...       
T Consensus       270 -~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~-~~~~~~~~~~~~~-------  336 (396)
T 3jtx_A          270 -YRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ----VFDVKLP-DASFYIWLKVPDG-------  336 (396)
T ss_dssp             -HHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT----TSCCCCC-SSSSEEEEECTTS-------
T ss_pred             -HHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccCC-CeeEEEEEECCCC-------
Confidence             2334555666 555444333    22222 23333333444444332    2112122 2377777877421       


Q ss_pred             ChHHHHHHHHHHH-HCCceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCK-EHGLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~-e~GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ....+...|+ ++||++.+..          ...+.+|+....     ++++|+++++++
T Consensus       337 ---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-----~~~~i~~~l~~l  391 (396)
T 3jtx_A          337 ---DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-----DVATCVKAAEDI  391 (396)
T ss_dssp             ---CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-----CHHHHHHHHHHH
Confidence               1234667775 5799997742          135799998653     589999999874

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=98.75  E-value=2.4e-08  Score=95.29  Aligned_cols=169  Identities=12%  Similarity=-0.044  Sum_probs=101.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA-------   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~-------   74 (329)
                      ..||+++|+||+|+  |  +..+..+.+|+...   ..|+|+|+. ++|++.+++++++.+.+  .. ..++.       
T Consensus       165 ~~~~~~li~D~~~~--g--~~~~~~~~~~~d~~~~s~~K~l~~~~-g~g~~~~~~~~~~~l~~--~~-~~~~~~~~~~~~  236 (379)
T 3ke3_A          165 HSVGGLLVIDCIAS--G--CVWLDMKELGIDVLISAPQKGWSSTP-CAGLVMLSAAAIKKVES--TE-SNCFSLDLKQWL  236 (379)
T ss_dssp             HHTTCEEEEECTTC--T--TCCCCHHHHTCSEEEECTTTTTCSCC-CEEEEEECHHHHHHHHT--CC-CSCSTTCHHHHH
T ss_pred             HHcCCEEEEEeccc--C--CccccccccCCCEEEecchhhcCCCC-ceEEEEECHHHHHhhhc--CC-CCceeecHHHHH
Confidence            45799999999997  4  34566777887666   359998763 68999999999887653  01 01111       


Q ss_pred             ----------cchhhhcc-HHHHHHHHh-hHHh-----H-HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEe
Q psy7882          75 ----------HKLKISDT-VRPHVQIKK-SVLE-----R-FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDL  135 (329)
Q Consensus        75 ----------hg~T~agn-lA~aaala~-~ile-----~-le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef  135 (329)
                                +..+++.+ .++++..+. ++++     + .++.+++.++|+++|+++  ....+.. ....+.+..+.+
T Consensus       237 ~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~--g~~~~~~~~~~~~~i~~~~~  314 (379)
T 3ke3_A          237 TIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK--GIESVAAEGFEAPGVVVSYT  314 (379)
T ss_dssp             HHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSBCTTCBCSSEEEEEC
T ss_pred             HHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCEecCCccccCceEEEEcc
Confidence                      11122444 333222233 4332     2 556677777787777765  2222211 011222333332


Q ss_pred             ecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . +        .+  ..+.+.|.++||++.+...       .++++|+.|+...   |++||+++++++
T Consensus       315 ~-~--------~~--~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~---t~~di~~~~~~l  369 (379)
T 3ke3_A          315 E-R--------DD--MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLD---KLTDIDGTVERF  369 (379)
T ss_dssp             S-C--------HH--HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHH---HHTCHHHHHHHH
T ss_pred             C-C--------cc--hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCC---CHHHHHHHHHHH
Confidence            1 1        11  1135678899999876421       1689999998876   578999999985

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=98.74  E-value=1e-07  Score=92.41  Aligned_cols=171  Identities=6%  Similarity=-0.032  Sum_probs=103.0

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCCcch------HHHhhcCCccccceeeec-------hhHHHhhhhhhhccC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF------VQKDFKGSFWDKLIVHTS-------TCTFENFIKIKYQIL   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD------i~KaLgGG~~PigAv~~~-------~eI~d~~~~~~~~~~   70 (329)
                      ..+|+++|+||++++|+++|..+ ....++..++      ++|.++...+++|+++++       +++.+.+..      
T Consensus       221 ~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~------  294 (427)
T 3dyd_A          221 ARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK------  294 (427)
T ss_dssp             HHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH------
T ss_pred             HHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH------
Confidence            46799999999999999888543 5555666665      469854333599999988       467666543      


Q ss_pred             CCCccchhhhcc-HHHHHHHHh-h-----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCC
Q psy7882          71 KTPAHKLKISDT-VRPHVQIKK-S-----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKET  141 (329)
Q Consensus        71 ~~~~hg~T~agn-lA~aaala~-~-----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~  141 (329)
                         .+..+++.+ ++++++.+. +     .+++ .++++++.+++.+.|++    +|.+..++.. |+++.+.+..... 
T Consensus       295 ---~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~p~~g~~~~~~l~~~~~-  366 (427)
T 3dyd_A          295 ---LSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA----IPGLRPVRPSGAMYLMVGIEMEHF-  366 (427)
T ss_dssp             ---HHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH----STTEEEECCSBTTEEEEEECGGGC-
T ss_pred             ---HHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCeeEEEEEecCHhhc-
Confidence               122355566 554444333 2     2222 44455555555555543    4555444444 5556666642110 


Q ss_pred             CCCCChHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        | +......++..|+ ++||++.++..  ..+.+|+.  +.+   ++++|+++++++
T Consensus       367 --~-~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis--~~~---~~e~i~~~l~~l  417 (427)
T 3dyd_A          367 --P-EFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVV--ITV---PEVMMLEACSRI  417 (427)
T ss_dssp             --T-TCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEE--SCS---CHHHHHHHHHHH
T ss_pred             --C-CCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEE--ECC---CHHHHHHHHHHH
Confidence              0 0011345677775 89999987431  35789987  333   689999999875

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=98.73  E-value=3.8e-08  Score=93.84  Aligned_cols=164  Identities=12%  Similarity=0.003  Sum_probs=107.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC--cch-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI--CRF-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV--~PD-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|.||+++++...|.......+.-  ..|     ++|.++ .| +++|++++++++++.+..        ..++
T Consensus       204 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~--------~~~~  274 (389)
T 1o4s_A          204 KKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSK--------IQSH  274 (389)
T ss_dssp             HHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHH
T ss_pred             HHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHH--------Hhhh
Confidence            357999999999999877664322222221  123     469997 66 599999999999887763        2334


Q ss_pred             hhhhcc-HHHHHHHHh-h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          77 LKISDT-VRPHVQIKK-S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      .+++.+ ++++++.+. + .+++ .+++++..+++.+.|+++  ....+. - .-|+++.+.+.  .      +   ...
T Consensus       275 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~-~~~~~~~~~~~--~------~---~~~  339 (389)
T 1o4s_A          275 TTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM--GVKFVE-P-EGAFYLFFKVR--G------D---DVK  339 (389)
T ss_dssp             HTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCC-C-SBSSEEEEECS--S------C---HHH
T ss_pred             cccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--CCeeec-C-CcceEEEEeCC--C------C---HHH
Confidence            456666 655555443 2 1333 667888888888888875  233221 1 12566666663  0      1   245


Q ss_pred             HHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|+ ++||++.++..  .++.+|+.++.     ++++|+++++.+
T Consensus       340 l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-----~~~~l~~~l~~l  382 (389)
T 1o4s_A          340 FCERLLEEKKVALVPGSAFLKPGFVRLSFAT-----SIERLTEALDRI  382 (389)
T ss_dssp             HHHHHHHHHCEECEEGGGGTCTTEEEEECCS-----CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-----CHHHHHHHHHHH
Confidence            778887 89999987421  14689999872     578999999874

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=98.72  E-value=1.7e-07  Score=88.93  Aligned_cols=173  Identities=14%  Similarity=0.049  Sum_probs=103.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL----   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~----   77 (329)
                      ..||+++|+||+++. |..  .+..+.+++...   ..|.++|+. ++|++++++++.+.+..  .....+..||+    
T Consensus       165 ~~~~~~li~Dea~~~-~~~--~~~~~~~~~d~~~~s~~K~l~~~~-g~g~~~~~~~~~~~~~~--~~~~~~~~~g~~~~g  238 (411)
T 3nnk_A          165 RRYDALFYTDATASL-GGN--PLETDVWGLDAVSAGMQKCLGGPS-GTSPITLSARMEEAIRR--RKCVEEGIRTDAHRD  238 (411)
T ss_dssp             HHHTCEEEEECTTTB-TTB--CCCTTTTTCSEEECCSTTTTCCCS-SEEEEEECHHHHHHHHT--TCCCCGGGCCTTCCC
T ss_pred             HHcCCEEEEECCccc-CCc--ccchhccCCcEEEecCccccCCCC-ceEEEEECHHHHHHHhh--ccccccccccccccc
Confidence            357999999999763 221  233344443333   459998875 89999999999887653  11000001110    


Q ss_pred             --------------------------hhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCcee-
Q psy7882          78 --------------------------KISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVG-  122 (329)
Q Consensus        78 --------------------------T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~-  122 (329)
                                                +++.+ .++++..+. +.     +++ .++..++.+++.+.|+++  ...... 
T Consensus       239 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~  316 (411)
T 3nnk_A          239 GDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM--GLETFGD  316 (411)
T ss_dssp             CSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBCSC
T ss_pred             ccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCEeCCC
Confidence                                      11223 233222222 22     233 667788888888888775  222221 


Q ss_pred             eEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         123 DVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       123 ~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      .....+.+..+.+....      +   ...+.+.|.++ ||++.+..  ..++.+|+.+ +++.   +++|++++++++
T Consensus       317 ~~~~~~~~~~~~~~~~~------~---~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~---~~~~i~~~~~~l  383 (411)
T 3nnk_A          317 LKHKMNNVLGVVIPQGI------N---GDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNA---RKDCVMTTLSAL  383 (411)
T ss_dssp             GGGBCSSEEEEECCTTC------C---HHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             cccccccEEEEECCCCC------C---HHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcC---CHHHHHHHHHHH
Confidence            11235677777763211      1   34577888876 99998631  2357999998 8776   579999999985

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=98.71  E-value=9.4e-08  Score=89.14  Aligned_cols=158  Identities=10%  Similarity=-0.028  Sum_probs=101.9

Q ss_pred             cccceEEehhHhhchhccchhh---h-hccc-CCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL---G-FQCL-QICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f---A-~e~~-GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+|+++|+||+++++.+.|...   . ...+ +....   ++|.++ .| +++|.+++++++.+.+..        ..+.
T Consensus       171 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~  241 (354)
T 3ly1_A          171 PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGR--------YVAG  241 (354)
T ss_dssp             CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGG--------GTTC
T ss_pred             CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHH--------hcCC
Confidence            4799999999999998776321   1 1222 32233   569997 67 499999999999887763        1111


Q ss_pred             hhhhcc-HHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          77 LKISDT-VRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        77 ~T~agn-lA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                        ++.+ ++++++.+.    +.+++ .++.+++.+++.+.|+++    + +..+.+.|.++.+++..+           .
T Consensus       242 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----~-~~~~~~~~~~~~~~~~~~-----------~  303 (354)
T 3ly1_A          242 --EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL----K-LPYLPSEGNFVFHQLVVP-----------L  303 (354)
T ss_dssp             --SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH----T-CCBCCCCSSEEEEECSSC-----------H
T ss_pred             --CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----C-CeECCCCceEEEEECCCC-----------H
Confidence              4455 444444333    33333 455666666666666654    2 223356788887777421           3


Q ss_pred             HHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++. ..  ...+.+|+...      +++|++++++++
T Consensus       304 ~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~------~~~~i~~~~~~l  345 (354)
T 3ly1_A          304 KDYQTHMADAGVLIG-RAFPPADNWCRISLG------TPQEMQWVADTM  345 (354)
T ss_dssp             HHHHHHHHHTTEECC-CCCTTCTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence            457888899999987 21  13578999832      578999999975

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=98.71  E-value=1.5e-07  Score=90.99  Aligned_cols=172  Identities=10%  Similarity=0.014  Sum_probs=100.4

Q ss_pred             ccccceEEehhHhhchhccch----hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT----YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~----~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|.||+++++...|.    +.+....+....   ++|.++.| +++|.+++++++++.+..        ..+..
T Consensus       221 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G-lRiG~~~~~~~l~~~l~~--------~~~~~  291 (425)
T 2r2n_A          221 RKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG-LRIGFLTGPKPLIERVIL--------HIQVS  291 (425)
T ss_dssp             HHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST-TCCEEEEEEHHHHHHHHH--------HHHTT
T ss_pred             HHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc-cceEEEecCHHHHHHHHH--------HHHHh
Confidence            357999999999999876663    222222222233   57999988 599999999999887763        12233


Q ss_pred             hhhcc-HHHHHHHHh-hHHh--H-HHHHHHHHHHHHH---HHHHHHHh-CCceee--EEeeceeeEEEeecCCCCCCCCC
Q psy7882          78 KISDT-VRPHVQIKK-SVLE--R-FVHTYVVGNFLLT---HLSKLREE-FAIVGD--VRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile--~-le~v~~lG~~L~~---gL~eL~~~-~p~v~~--VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      +++.+ ++++++.+. +.+.  . .++++++.+++++   .|.+..++ .|.+..  ...-|+++.+++....      +
T Consensus       292 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~------~  365 (425)
T 2r2n_A          292 TLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN------D  365 (425)
T ss_dssp             TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS------C
T ss_pred             cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC------C
Confidence            45555 554444333 2210  0 1233333333322   22222222 333222  2345788888885311      1


Q ss_pred             hHHHHHHHHHHHHCCceeeccCC-------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGL-------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~-------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .  ...+.+.|.++||++.++..       ..+.+|+.... .   ++++++++++++
T Consensus       366 ~--~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~---~~~~i~~~~~~l  417 (425)
T 2r2n_A          366 V--KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-A---SPEQMDVAFQVL  417 (425)
T ss_dssp             C--HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-C---CHHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-C---CHHHHHHHHHHH
Confidence            1  12256778899999987421       13789998763 2   589999999875

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=98.69  E-value=4e-08  Score=94.04  Aligned_cols=167  Identities=8%  Similarity=-0.007  Sum_probs=101.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCc-ch-----HHHhhc-CCccccceee--ech----hHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-----VQKDFK-GSFWDKLIVH--TST----CTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-----i~KaLg-GG~~PigAv~--~~~----eI~d~~~~~~~~~~~   71 (329)
                      ..+|+++|.||+++++.+.|.......++-. ||     ++|.++ .| +++|+++  +++    ++++.+..  ..   
T Consensus       204 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~--~~---  277 (406)
T 1xi9_A          204 GEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDR--LA---  277 (406)
T ss_dssp             HHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHH--HH---
T ss_pred             HHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHH--HH---
Confidence            3579999999999998774444344444311 14     369997 56 5999998  888    88887753  11   


Q ss_pred             CCccchhhhcc-HHHH---HHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCC
Q psy7882          72 TPAHKLKISDT-VRPH---VQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKV  143 (329)
Q Consensus        72 ~~~hg~T~agn-lA~a---aala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~  143 (329)
                         +.. ++.+ ++++   ++++.  +.+++ .++++++.+++.+.|++    .|.+.-++.. |++..+.+.....   
T Consensus       278 ---~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~---  346 (406)
T 1xi9_A          278 ---RIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE----IPGISTTKPQGAFYIFPKIEVGPW---  346 (406)
T ss_dssp             ---HHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT----STTEECCCCCBSSEECCEECSCSC---
T ss_pred             ---Hhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh----CCCCeeecCCeeEEEEEecCccCC---
Confidence               111 3344 3333   33432  22333 45666777777666654    3333323333 4555556632100   


Q ss_pred             CCChHHHHHHHHHHH-HCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         144 PLNSRHMTHILDSCK-EHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       144 p~~~~~~~~~~~~l~-e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .+   ...+.+.|+ ++||++.++..    ..+.+|+.++  .   ++++|+++++++
T Consensus       347 -~~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~---~~~~i~~~~~~l  396 (406)
T 1xi9_A          347 -KN---DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--P---PIEILEEAMDRF  396 (406)
T ss_dssp             -SS---HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--S---CHHHHHHHHHHH
T ss_pred             -CC---HHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence             01   345777787 89999987531    1578999987  3   588999999875

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=98.67  E-value=2.6e-07  Score=88.71  Aligned_cols=170  Identities=11%  Similarity=-0.046  Sum_probs=98.2

Q ss_pred             ccccceEEehhHhhchhcc-------chhhhhc----ccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccC
Q psy7882           5 YYRDCGVVVSAVDFGSGDN-------GTYLGFQ----CLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRT-------G~~fA~e----~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~   70 (329)
                      ..||+++|.||+++.+...       ..+++..    ..+....   ++|.+.+| +++|.+++++++++.+..      
T Consensus       204 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~~------  276 (423)
T 3ez1_A          204 AAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLSK------  276 (423)
T ss_dssp             SSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHHH------
T ss_pred             hccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHHH------
Confidence            5789999999999943222       2233321    2222222   56987778 599999999999887764      


Q ss_pred             CCCccchhhhcc-HHHHHH---HHh--hHHhH-----HHHHHHHHHHHHHHHHHHHHhCC-cee-eEEeeceeeEEEeec
Q psy7882          71 KTPAHKLKISDT-VRPHVQ---IKK--SVLER-----FVHTYVVGNFLLTHLSKLREEFA-IVG-DVRGKGLMIGVDLVQ  137 (329)
Q Consensus        71 ~~~~hg~T~agn-lA~aaa---la~--~ile~-----le~v~~lG~~L~~gL~eL~~~~p-~v~-~VRG~GLm~gIef~~  137 (329)
                        ..+..+++.+ +++.++   ++.  +.+++     .+..++.-+.+.+.|.+.....+ .+. ....-|+++.+++..
T Consensus       277 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (423)
T 3ez1_A          277 --YLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE  354 (423)
T ss_dssp             --HHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS
T ss_pred             --HHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC
Confidence              1223334444 433333   332  22211     11222223333344443322233 121 122457888888853


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         138 DKETKVPLNSRHMTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .          ....+...|.++||++.++|        ...+.+||.++..    ++++|+++++++
T Consensus       355 ~----------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~----~~~~i~~~~~~l  408 (423)
T 3ez1_A          355 P----------VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP----PVEEVRTAMQVV  408 (423)
T ss_dssp             S----------CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS----CHHHHHHHHHHH
T ss_pred             C----------cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC----CHHHHHHHHHHH
Confidence            1          13457788899999998843        1357899998654    379999999975

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=98.66  E-value=1.7e-07  Score=89.15  Aligned_cols=167  Identities=10%  Similarity=-0.021  Sum_probs=102.7

Q ss_pred             ccccceEEehhHhh-c-hhccchhhhhcccCCc--ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDF-G-SGDNGTYLGFQCLQIC--RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqT-G-fGRTG~~fA~e~~GV~--PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||+++ | +|++|..+. ..+++.  +|     ++|+++.   |-|.+++++++.+.+.......   ...
T Consensus       205 ~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~~~~~~i~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~~~~---~~~  277 (401)
T 2bwn_A          205 EEFGALTYIDEVHAVGMYGPRGAGVA-ERDGLMHRIDIFNGTLAKAYGV---FGGYIAASARMVDAVRSYAPGF---IFS  277 (401)
T ss_dssp             HHHTCEEEEECTTTTTTSSTTSCCHH-HHHTCGGGCSEEEEESSSTTCS---CCEEEEECHHHHHHHHHHCHHH---HTS
T ss_pred             HHcCCEEEEeccccccccCCCCceee-eccCccccCcEEEeechhhccC---CCCEEecCHHHHHHHHHhCcCc---eec
Confidence            35799999999999 3 577776554 556653  35     5699982   1155677888877654200000   001


Q ss_pred             chhhhccHHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          76 KLKISDTVRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        76 g~T~agnlA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      ++|  .+++++++.+. +.+     ++ .++++++.+++.+.|+++  ....+.   ..|.++.+.+..         ..
T Consensus       278 ~~~--~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~~~~~~~~~---------~~  341 (401)
T 2bwn_A          278 TSL--PPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL--GMPIID---HGSHIVPVVIGD---------PV  341 (401)
T ss_dssp             BCC--CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH--TCCBCC---CSSSCEEEECCC---------HH
T ss_pred             CCC--CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC--CCcccC---CCCCeEEEEeCC---------hH
Confidence            111  11344333333 332     33 667888888999888876  333321   234577777642         12


Q ss_pred             HHHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|+ ++||++.+...     ..+.+|+.+++..   +++|++++++++
T Consensus       342 ~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~---t~~~i~~~~~~l  393 (401)
T 2bwn_A          342 HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVH---DLKQIDGLVHAM  393 (401)
T ss_dssp             HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCC---CHHHHHHHHHHH
Confidence            2456788886 78999976431     1258999998765   589999999975

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=98.66  E-value=2.3e-07  Score=86.06  Aligned_cols=172  Identities=10%  Similarity=0.007  Sum_probs=105.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA-----   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~-----   74 (329)
                      .+||+++|+||+++ +|...  +..+.  ..+|     ++|+++|+. ++|++++++++++.+..  .. .....     
T Consensus       158 ~~~~~~li~Dea~~-~~~~~--~~~~~--~~~di~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~--~~-~~~~~~~~~~  228 (366)
T 1m32_A          158 HRYGKTYIVDAMSS-FGGIP--MDIAA--LHIDYLISSANKCIQGVP-GFAFVIAREQKLAACKG--HS-RSLSLDLYAQ  228 (366)
T ss_dssp             HHHTCEEEEECTTT-TTTSC--CCTTT--TTCSEEEEESSSTTCCCS-SEEEEEEEHHHHTTCTT--CC-SCSTTCHHHH
T ss_pred             HHcCCEEEEECCcc-ccCcC--ccccc--cCccEEEecCcccccCCC-ceEEEEECHHHHHhhcC--CC-CCccccHHHH
Confidence            35799999999997 44432  11222  2377     359998874 78999999998876542  00 00000     


Q ss_pred             -c------c-hhhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEee
Q psy7882          75 -H------K-LKISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLV  136 (329)
Q Consensus        75 -h------g-~T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~  136 (329)
                       +      + ..++.+ .+++++.+. +.      +++ .++.+++.+++.+.|+++  ........ ...|.++.+.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~  306 (366)
T 1m32_A          229 WRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL--GFNTLLDDELHSPIITAFYSP  306 (366)
T ss_dssp             HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT--TCCBSSCGGGBCSSEEEEECC
T ss_pred             HhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC--CCeeccCchhcCceEEEEEcC
Confidence             0      0 024455 444333333 22      333 667788888888888775  23322211 124668888874


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....    .   ....+.+.|.++||++.+... ..+.+|+.++...   +++|++++++++
T Consensus       307 ~~~~----~---~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  358 (366)
T 1m32_A          307 EDPQ----Y---RFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEV---YAADITALLTAI  358 (366)
T ss_dssp             CCTT----C---CHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSC---CHHHHHHHHHHH
T ss_pred             ccCC----C---CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCC---CHHHHHHHHHHH
Confidence            2100    0   135688889999999987432 3579999998765   589999999875

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=98.65  E-value=2.3e-07  Score=86.97  Aligned_cols=160  Identities=11%  Similarity=0.073  Sum_probs=99.3

Q ss_pred             cccceEEehhHhhchh---ccch----hhhhcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           6 YRDCGVVVSAVDFGSG---DNGT----YLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         6 ~~giLLI~DEVqTGfG---RTG~----~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      .+|+++|.||+++++.   ..+.    ....+.++....   ++|.++ .| +++|.+++++++.+.+..  .       
T Consensus       183 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--~-------  252 (365)
T 3get_A          183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYK--L-------  252 (365)
T ss_dssp             CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHH--H-------
T ss_pred             CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHH--h-------
Confidence            3599999999999886   3221    111122222222   569997 67 599999999999887763  1       


Q ss_pred             cchhhhcc-HHHHH---HHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          75 HKLKISDT-VRPHV---QIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        75 hg~T~agn-lA~aa---ala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                       ..+|+.+ +++++   +++. +.+++ .++.++..+++.+.|+++    + +..+.+.|.++.+.+...          
T Consensus       253 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----g-~~~~~~~~~~~~~~~~~~----------  316 (365)
T 3get_A          253 -RAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH----N-IKIIDSYTNFITYFFDEK----------  316 (365)
T ss_dssp             -SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT----T-CEECCCSSSEEEEECSSS----------
T ss_pred             -cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC----C-CEECCCCCeEEEEECCCC----------
Confidence             1123444 44333   3333 33333 445555555666655543    3 223456677777776421          


Q ss_pred             HHHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+.+.|.++||++.+.... .+.+|+...      +++|++++++++
T Consensus       317 ~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~------~~~~i~~l~~~l  360 (365)
T 3get_A          317 NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG------TSYENEKFFTEF  360 (365)
T ss_dssp             CHHHHHHHHHTTTEECEECGGGTCSEEEEECC------CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC------CHHHHHHHHHHH
Confidence            1345788899999999875322 588999854      579999999875

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=98.63  E-value=3.3e-07  Score=88.55  Aligned_cols=169  Identities=14%  Similarity=0.056  Sum_probs=101.9

Q ss_pred             cccceEEehhHhh--chhccchh-hhh-------cccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCC
Q psy7882           6 YRDCGVVVSAVDF--GSGDNGTY-LGF-------QCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT   72 (329)
Q Consensus         6 ~~giLLI~DEVqT--GfGRTG~~-fA~-------e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~   72 (329)
                      +||+++|.||++.  +|+..|.. ...       +..+...+   ++|.++.| +++|.+++++++.+.+..        
T Consensus       211 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~--------  281 (422)
T 3d6k_A          211 APDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYAS--------  281 (422)
T ss_dssp             STTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH--------
T ss_pred             ccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHH--------
Confidence            6899999999997  57655421 111       12333344   57987777 599999999999887764        


Q ss_pred             Cccchhhhcc-HHHHHHHHh----hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCC
Q psy7882          73 PAHKLKISDT-VRPHVQIKK----SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKET  141 (329)
Q Consensus        73 ~~hg~T~agn-lA~aaala~----~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~  141 (329)
                      ..+..+++.+ ++++++.+.    +.+++     .+.+++.-+++.+.|++.....+.+.-+. .-|+++.+++...   
T Consensus       282 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~---  358 (422)
T 3d6k_A          282 HANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG---  358 (422)
T ss_dssp             HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT---
T ss_pred             HHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC---
Confidence            1223344455 444443332    11211     22233344455555555433333222222 2477788887421   


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCC--------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGL--------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~--------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          +   ...+...+.++||++.++|.        ..+.+||.+.. .   ++++++++++++
T Consensus       359 ----~---~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~---~~e~i~~~~~~l  411 (422)
T 3d6k_A          359 ----T---ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-P---PVAELEVAMDGF  411 (422)
T ss_dssp             ----C---HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-S---CHHHHHHHHHHH
T ss_pred             ----C---HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-C---CHHHHHHHHHHH
Confidence                1   23467788899999988431        24789999876 4   589999999975

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=98.63  E-value=2e-07  Score=89.51  Aligned_cols=166  Identities=9%  Similarity=-0.023  Sum_probs=104.0

Q ss_pred             ccccceEEehhHhhchhccchh---------hhhcc-cCCcch---HHHhhc-CCccccceeeechhHHH-h--------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY---------LGFQC-LQICRF---VQKDFK-GSFWDKLIVHTSTCTFE-N--------   61 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~---------fA~e~-~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d-~--------   61 (329)
                      ..||+++|+||+++++...|..         ..+.. .+....   ++|.++ .| +++|++++++++++ .        
T Consensus       212 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~  290 (437)
T 3g0t_A          212 TKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESF  290 (437)
T ss_dssp             HHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHH
T ss_pred             HHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccc
Confidence            3579999999999987554321         11111 121111   569998 77 49999999999988 6        


Q ss_pred             ---------hhhhhhccCCCCccchhhhcc-HHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCcee
Q psy7882          62 ---------FIKIKYQILKTPAHKLKISDT-VRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVG  122 (329)
Q Consensus        62 ---------~~~~~~~~~~~~~hg~T~agn-lA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~  122 (329)
                               +..        ..+..+++.+ ++++++.+. +.       +++ .+++++..+++.+.|+++    +...
T Consensus       291 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~  358 (437)
T 3g0t_A          291 GRLRFGEALSSS--------ALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN----GFNI  358 (437)
T ss_dssp             SCSBHHHHHHTT--------HHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT----TEEE
T ss_pred             cccchhHHHHHH--------HHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCEE
Confidence                     331        2334556666 555444433 21       333 566677777777777654    3211


Q ss_pred             e------EE-eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---C-CCEEEEeCccccCcCCHHHHH
Q psy7882         123 D------VR-GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---S-GNTLTALQPKLLNYWTDFVGT  191 (329)
Q Consensus       123 ~------VR-G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~-~nvIrl~PPL~It~~t~eeId  191 (329)
                      .      .. ..|.++.+.+. +.      +   ...+.+.|.++||++.+...   . ++.+|+.++.+    +++||+
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~-~~------~---~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~----~~e~i~  424 (437)
T 3g0t_A          359 VYDKDGNEPLADGFYFTVGYK-GM------D---SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLL----PESQFP  424 (437)
T ss_dssp             SSCEETTEECCSSSEEEEEET-TC------C---HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSS----CGGGHH
T ss_pred             eccccCCCCCceeEEEEEecC-CC------C---HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecC----CHHHHH
Confidence            1      23 55777777774 11      1   34588889999999987432   1 16799988743    468999


Q ss_pred             HHHhcc
Q psy7882         192 PCLDCE  197 (329)
Q Consensus       192 ~~l~~~  197 (329)
                      ++++++
T Consensus       425 ~~~~~l  430 (437)
T 3g0t_A          425 DLEKRL  430 (437)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=98.63  E-value=3.1e-07  Score=88.57  Aligned_cols=164  Identities=5%  Similarity=-0.111  Sum_probs=97.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhH--------HHhhhhhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCT--------FENFIKIKYQ   68 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI--------~d~~~~~~~~   68 (329)
                      ..||+++|+||++++|...+.......+.-.+|       ++|+++ .| +++|.+++++++        .+.+..    
T Consensus       228 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~----  302 (432)
T 3ei9_A          228 KKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNR----  302 (432)
T ss_dssp             HHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHH----
T ss_pred             HHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHH----
Confidence            467999999999999866554333333322233       579998 88 499999999887        454442    


Q ss_pred             cCCCCccchhhhcc-HHHHHHHHh-h-----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCC
Q psy7882          69 ILKTPAHKLKISDT-VRPHVQIKK-S-----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDK  139 (329)
Q Consensus        69 ~~~~~~hg~T~agn-lA~aaala~-~-----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~  139 (329)
                          ..+..+++.+ ++++++++. .     .+++ .+++++..++|.+.|+++    +. .-+.+ .|.++.+.+. +.
T Consensus       303 ----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~-~~  372 (432)
T 3ei9_A          303 ----IICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL----GY-DVYGGKNAPYVWVHFP-NQ  372 (432)
T ss_dssp             ----HHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CEEECSSSSEEEEECT-TS
T ss_pred             ----HhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC----Cc-eecCCCcceEEEEECC-CC
Confidence                1111223344 444444333 1     1222 455566666666666654    22 22232 4566666664 11


Q ss_pred             CCCCCCChHHHHHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         140 ETKVPLNSRHMTHILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                            +   ...+...+++ +||++.+..    ...+.+|+.  +..   ++++|+++++.+
T Consensus       373 ------~---~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~~---~~e~l~~~l~rl  421 (432)
T 3ei9_A          373 ------S---SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AFG---HRENILEACRRF  421 (432)
T ss_dssp             ------C---HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             ------C---HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence                  1   2346666665 599998742    135789998  333   689999999975

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=98.62  E-value=2.4e-07  Score=88.62  Aligned_cols=165  Identities=7%  Similarity=-0.120  Sum_probs=100.9

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcccCCcch-------HHHhhc-CCccccceeeechhH-------HHhhhhhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCT-------FENFIKIKYQ   68 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI-------~d~~~~~~~~   68 (329)
                      ..+|+++|+||++++|+..|.. .....++-.+|       ++|.++ .| +++|.+++++++       .+.+..    
T Consensus       193 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~----  267 (400)
T 3asa_A          193 IEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWE----  267 (400)
T ss_dssp             HHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHH----
T ss_pred             HHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHH----
Confidence            3579999999999999776641 22223322244       469998 88 499999999887       444431    


Q ss_pred             cCCCCccchhh-hcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEE-eecCCC
Q psy7882          69 ILKTPAHKLKI-SDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVD-LVQDKE  140 (329)
Q Consensus        69 ~~~~~~hg~T~-agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIe-f~~d~~  140 (329)
                          ..+..++ +.+ ++++++.+.   ..+++ .+++++..++|.+.|+++    +. .-+.+ .|.++.++ +.... 
T Consensus       268 ----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~~~~~-  337 (400)
T 3asa_A          268 ----RFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT----GF-EVFGGEHAPYLWVKPTQANI-  337 (400)
T ss_dssp             ----HHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT----TC-EEEECSSSSEEEEECCCTTC-
T ss_pred             ----HHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC----CC-eeeCCCCceEEEEeccCCCC-
Confidence                1223344 344 444443333   21333 567778888888887764    22 22333 36777777 53211 


Q ss_pred             CCCCCChHHHHHHHHHHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                           +   ...+...+++ +||++.++..    ..+.+|+.  +..   ++++++++++++
T Consensus       338 -----~---~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~---~~e~i~~~l~~l  386 (400)
T 3asa_A          338 -----S---DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLG---KREDILAACERL  386 (400)
T ss_dssp             -----C---TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCS---CHHHHHHHHHHH
T ss_pred             -----C---HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeC---CHHHHHHHHHHH
Confidence                 1   1136666664 5999987421    24679987  333   689999999875

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=98.60  E-value=2.1e-07  Score=88.52  Aligned_cols=169  Identities=8%  Similarity=0.041  Sum_probs=97.3

Q ss_pred             ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech---hHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST---CTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~---eI~d~~~~~~~~~~~~~~h   75 (329)
                      .+||+++|+||++ +|+.++|.+...  .. .+|     ++|+++|.  ..|.+++++   ++++.+..        ..+
T Consensus       194 ~~~~~~li~De~~~~~~~~~~~~~~~--~~-~~di~~~s~sK~~~g~--~gg~~~~~~~~~~~~~~~~~--------~~~  260 (420)
T 3gbx_A          194 DSIGAYLFVDMAHVAGLIAAGVYPNP--VP-HAHVVTTTTHKTLAGP--RGGLILAKGGDEELYKKLNS--------AVF  260 (420)
T ss_dssp             HHTTCEEEEECTTTHHHHHTTSSCCS--TT-TSSEEEEESSGGGCSC--SCEEEEESSCCHHHHHHHHH--------HHC
T ss_pred             HHcCCEEEEECCcchhceecccCCcc--cc-cCCEEEeecccCCCCC--CceEEEEcCCcHHHHHHhhh--------hcC
Confidence            4679999999996 577666643221  11 278     35999742  346777776   67766553        112


Q ss_pred             chhhhcc-H----HHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          76 KLKISDT-V----RPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        76 g~T~agn-l----A~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      ++++++. .    ++++++..   +.+++ .+++.+..+++.+.|++.  ....+. -...+.++.+.+.....      
T Consensus       261 ~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~~~~~~~~~~~~~~~------  331 (420)
T 3gbx_A          261 PSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR--GYKVVS-GGTENHLFLLDLVDKNL------  331 (420)
T ss_dssp             ----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGG-GSCSSSEEEEECGGGTC------
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc--CCeecc-CCCCCeEEEEEcCCCCC------
Confidence            2222222 1    22222221   12222 567778888888888762  111111 01245566677643110      


Q ss_pred             hHHHHHHHHHHHHCCceeecc------C--CCCCEEEEeCccccCc-CCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRG------G--LSGNTLTALQPKLLNY-WTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~------G--~~~nvIrl~PPL~It~-~t~eeId~~l~~~  197 (329)
                        ....+.+.|.++||++.+.      +  ..++.+||.||.+.+. .+++|++++++++
T Consensus       332 --~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l  389 (420)
T 3gbx_A          332 --TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWM  389 (420)
T ss_dssp             --CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHH
Confidence              1345677788899999872      1  1245699999987542 3589999999975

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=98.57  E-value=4.3e-07  Score=86.59  Aligned_cols=166  Identities=9%  Similarity=-0.022  Sum_probs=99.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|.||++..+ ..+    ....++.||          ++|.+.+| +++|.+++++++.+.+..        ..
T Consensus       210 ~~~~~~li~De~~~~~-~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~--------~~  275 (417)
T 3g7q_A          210 NQHNIPLVIDNAYGVP-FPG----IIFSEARPLWNPNIILCMSLSKLGLPG-SRCGIIIANDKTITAIAN--------MN  275 (417)
T ss_dssp             HHTTCCEEEECTTCTT-TTC----CBCSCCCCCCCTTEEEEEESGGGTCTT-SCCEEEECCHHHHHHHHH--------HH
T ss_pred             HHcCCEEEEeCCCccc-ccc----ccccccccCCCCCEEEEEechhccCCC-cceEEEEeCHHHHHHHHH--------hh
Confidence            4679999999998643 111    122233332          56977777 599999999999887764        23


Q ss_pred             cchhhhcc-HHHHHH---HHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCC
Q psy7882          75 HKLKISDT-VRPHVQ---IKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        75 hg~T~agn-lA~aaa---la~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p  144 (329)
                      +..+++.+ ++++++   ++. +..+.     .++.++..+.+.+.|++.....+........|+++.+++....     
T Consensus       276 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----  350 (417)
T 3g7q_A          276 GIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLP-----  350 (417)
T ss_dssp             HHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCS-----
T ss_pred             cceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCC-----
Confidence            44455555 444433   333 22211     2233444455555555533222222222345788888875311     


Q ss_pred             CChHHHHHHHHHHHHCCceeeccCC---C--------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGRGGL---S--------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~~G~---~--------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+   ...+...|.++||++.++..   .        .+.+||.++.     ++++|+++++++
T Consensus       351 ~~---~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-----~~~~i~~~~~~l  406 (417)
T 3g7q_A          351 IT---TELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-----EPDKIEAGVKIL  406 (417)
T ss_dssp             SC---HHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-----CHHHHHHHHHHH
T ss_pred             CC---HHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-----CHHHHHHHHHHH
Confidence            11   34577888999999987421   1        4689998863     479999999975

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=98.57  E-value=8.3e-07  Score=83.60  Aligned_cols=169  Identities=8%  Similarity=-0.060  Sum_probs=98.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL---------   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~---------   70 (329)
                      .+||+++|+||+++. |...  +....  ..+|     ++|.++ + ..+|++++++++++.+.+...+..         
T Consensus       191 ~~~~~~li~D~~~~~-g~~~--~~~~~--~~~d~~~~s~~K~~g-~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (406)
T 1kmj_A          191 HQHGAKVLVDGAQAV-MHHP--VDVQA--LDCDFYVFSGHKLYG-P-TGIGILYVKEALLQEMPPWEGGGSMIATVSLSE  263 (406)
T ss_dssp             HHTTCEEEEECTTTT-TTSC--CCHHH--HTCSEEEEEGGGTTS-C-TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTT
T ss_pred             HHcCCEEEEEchhhc-CCCC--Ccccc--cCCCEEEEEchhccC-C-CCcEEEEEeHHHHhhcCCcccCCCceeeccccc
Confidence            457999999999974 3331  12222  3477     469883 3 248999999998877643000000         


Q ss_pred             ----CCCccchhhhcc-HHHHHHH-Hh-hHHh-----H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEe
Q psy7882          71 ----KTPAHKLKISDT-VRPHVQI-KK-SVLE-----R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDL  135 (329)
Q Consensus        71 ----~~~~hg~T~agn-lA~aaal-a~-~ile-----~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef  135 (329)
                          .......+.+.+ +++++++ +. +.++     + .++.+++.+++.+.|++    .+.+.-+..  .|.++.+.+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~  339 (406)
T 1kmj_A          264 GTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLES----VPDLTLYGPQNRLGVIAFNL  339 (406)
T ss_dssp             EEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT----STTEEEESCTTCCSEEEEEE
T ss_pred             ccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCcCCEEEEEE
Confidence                000001112233 5555544 23 4443     2 44555666666666654    332322223  688888876


Q ss_pred             ecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC----------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL----------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . +.      +   ...+.+.|.++||++.+...          ..+.+|+.++...   +++|++++++++
T Consensus       340 ~-~~------~---~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~---t~~~i~~~~~~l  398 (406)
T 1kmj_A          340 G-KH------H---AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN---THEEVDRLVTGL  398 (406)
T ss_dssp             T-TC------C---HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             C-CC------C---HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCC---CHHHHHHHHHHH
Confidence            3 11      1   23577888999999876321          1479999998776   589999999975

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=98.57  E-value=1.7e-07  Score=88.93  Aligned_cols=167  Identities=7%  Similarity=-0.022  Sum_probs=101.8

Q ss_pred             ccceEEehhHhhchhccchhhh--hcccCCcch---HHHhhc-CCccccceeeechhHHHh--hhhhhhccCCCCccchh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLG--FQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFEN--FIKIKYQILKTPAHKLK   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA--~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~--~~~~~~~~~~~~~hg~T   78 (329)
                      ||+++|.||++++|.+.|....  .+.++....   ++|.++ .| +++|.+++++++.+.  +......   ...+.++
T Consensus       210 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~  285 (398)
T 3ele_A          210 RPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCG---AGRALGY  285 (398)
T ss_dssp             SCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHH---HHHHTTC
T ss_pred             CCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHH---Hhhhccc
Confidence            7999999999999987774322  233333333   579998 88 499999999885432  1110000   0011224


Q ss_pred             hhcc-HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          79 ISDT-VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ++.+ ++++++.+. +..+..+++++..+++.+.|+++  ...   -+... |+++.+.+...          ....+.+
T Consensus       286 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~~~~~~~~~~~~~~----------~~~~~~~  350 (398)
T 3ele_A          286 VCAPSLFQKMIVKCQGATGDINAYKENRDLLYEGLTRI--GYH---CFKPDGAFYMFVKALED----------DSNAFCE  350 (398)
T ss_dssp             CCSCHHHHHHHTTCTTCCCCHHHHHHHHHHHHHHHHHH--TCC---EECCSBSSEEEEECSSS----------CHHHHHH
T ss_pred             cCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCe---ecCCCeeEEEEEEcCCC----------CHHHHHH
Confidence            4455 444433322 11111567888888999888876  221   12222 45466666321          1345777


Q ss_pred             HHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||++.++..  .++.+|+...  .   ++++|+++++++
T Consensus       351 ~l~~~gi~v~~g~~~~~~~~iRis~~--~---~~e~i~~~l~~l  389 (398)
T 3ele_A          351 KAKEEDVLIVAADGFGCPGWVRISYC--V---DREMIKHSMPAF  389 (398)
T ss_dssp             HHHTTTEECEESGGGTCTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred             HHHHCCEEEeCccccCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence            88999999987432  2578999763  2   689999999975

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=98.56  E-value=1.7e-07  Score=89.29  Aligned_cols=170  Identities=6%  Similarity=-0.051  Sum_probs=101.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhc---cCC----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQ---ILK----   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~---~~~----   71 (329)
                      ..+|+++|+||+++ +|...  +..+.+  .+|     ..|.+++|. ++ |++++++++.+.+.+...+   ...    
T Consensus       192 ~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~~~~s~~K~l~~g~-~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~  265 (416)
T 1qz9_A          192 HECGALAIWDLAHS-AGAVP--VDLHQA--GADYAIGCTYKYLNGGP-GSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAM  265 (416)
T ss_dssp             HHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEEECSSSTTCCCT-TCCCEEEECTTTTTTSCCSCCCGGGBCTTSCC
T ss_pred             HHcCCEEEEEcccc-ccCcC--CChhhc--CCCEEEecCcccCCCCC-CCeEEEEECHHHHhccCCCccccCccccccCC
Confidence            35799999999997 55432  122223  377     249998885 77 9999999887655420000   000    


Q ss_pred             --CC-----ccchhh-hcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHH--hCCceeeE--Eeeceee
Q psy7882          72 --TP-----AHKLKI-SDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLRE--EFAIVGDV--RGKGLMI  131 (329)
Q Consensus        72 --~~-----~hg~T~-agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~--~~p~v~~V--RG~GLm~  131 (329)
                        .+     .+..++ +.+ .+++++.+. +.+     ++ .++.+++.++|.+.|+++..  ....+...  ++.|.++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~  345 (416)
T 1qz9_A          266 EPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHV  345 (416)
T ss_dssp             CSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEE
T ss_pred             CCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEE
Confidence              00     011111 234 344333333 333     22 67788888999998887632  22222111  1235667


Q ss_pred             EEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882         132 GVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQP-KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       132 gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PP-L~It~~t~eeId~~l~~~  197 (329)
                      .+.+..            ...+.+.|.++||++...  ..+.+|+.++ +.+   +++|++++++++
T Consensus       346 ~~~~~~------------~~~l~~~l~~~gi~~~~~--~~~~lRis~~~~~~---t~~~i~~~~~~l  395 (416)
T 1qz9_A          346 SFEHPE------------GYAVIQALIDRGVIGDYR--EPRIMRFGFTPLYT---TFTEVWDAVQIL  395 (416)
T ss_dssp             EEECTT------------HHHHHHHHHTTTEECEEE--TTTEEEEECCTTTC---CHHHHHHHHHHH
T ss_pred             EEecCC------------HHHHHHHHHhCCcEeccC--CCCeEEEeCcccCC---CHHHHHHHHHHH
Confidence            776531            345788889999998653  3689999986 555   589999999985

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=98.53  E-value=3.5e-07  Score=90.99  Aligned_cols=175  Identities=11%  Similarity=0.005  Sum_probs=107.0

Q ss_pred             ccccceEEehhHhhch-----hccch---hhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhh------
Q psy7882           5 YYRDCGVVVSAVDFGS-----GDNGT---YLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKY------   67 (329)
Q Consensus         5 ~~~giLLI~DEVqTGf-----GRTG~---~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~------   67 (329)
                      .+||++||+||+++||     +++|.   .+.....|+...   ..|.+.+|+ ++|+++++++.+........      
T Consensus       266 ~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~  344 (514)
T 3mad_A          266 AEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAK-GTSVILYRRPDLLHYQYFIAADWPGG  344 (514)
T ss_dssp             HHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCS-SCEEEEESSHHHHTTTCEEESSCTTC
T ss_pred             HHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCC-CeEEEEEeCHHHhccccccccccCCC
Confidence            4679999999999987     45554   445556666443   459988885 89999998877654221000      


Q ss_pred             ccCCCCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC
Q psy7882          68 QILKTPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK  142 (329)
Q Consensus        68 ~~~~~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~  142 (329)
                      .......+++++..+ +++.++++.   +-+++ .+++.++.++|.+.|+++ .....+...   ..++.+...  .   
T Consensus       345 ~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~---~~~~~~~~~--~---  415 (514)
T 3mad_A          345 LYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAI-PSLKILGDP---LWVIAVASD--E---  415 (514)
T ss_dssp             SEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-TTCEESSCC---SSEEEEECS--S---
T ss_pred             cccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEeCCC---eEEEEEeCC--C---
Confidence            000112355555555 666666654   22333 677888888888888764 111112121   224554431  1   


Q ss_pred             CCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        .+   ...+.+.|.++||++.... .++.+|+.+....+  ++++++++++++
T Consensus       416 --~~---~~~l~~~L~~~Gi~v~g~~-~~~~~Ri~~~~~~~--~~e~i~~~l~~L  462 (514)
T 3mad_A          416 --LN---IYQVMEEMAGRGWRLNGLH-RPPAFHVALTLRHT--EPGVVDRFLADL  462 (514)
T ss_dssp             --SC---HHHHHHHHHTTTCBCEEET-TTTEEEEECCGGGG--STTHHHHHHHHH
T ss_pred             --CC---HHHHHHHHHhcCCEeccCC-CCCeEEEEEecCCC--CHHHHHHHHHHH
Confidence              11   3468889999999884332 46789998763332  468999999975

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=98.52  E-value=7e-07  Score=85.56  Aligned_cols=163  Identities=6%  Similarity=-0.024  Sum_probs=98.4

Q ss_pred             cccceEEehhHhhchhccch---hhhhcccCCcch--------HHHhhc-CCccccceeee---chhHHHhhhhhhhccC
Q psy7882           6 YRDCGVVVSAVDFGSGDNGT---YLGFQCLQICRF--------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQIL   70 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~---~fA~e~~GV~PD--------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~   70 (329)
                      .||+++|.||++++|+++|.   .+.....++.+|        ++|.++ .| +++|.+++   ++++.+.+.....   
T Consensus       217 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~---  292 (418)
T 3rq1_A          217 RNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFEVNK---  292 (418)
T ss_dssp             SCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHHHHH---
T ss_pred             CCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHHHHH---
Confidence            78999999999999998774   233344556666        469997 56 59999998   8999887753000   


Q ss_pred             CCCccchhh-hcc-HHHHHH---HHh-hH---H-h---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEee
Q psy7882          71 KTPAHKLKI-SDT-VRPHVQ---IKK-SV---L-E---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLV  136 (329)
Q Consensus        71 ~~~~hg~T~-agn-lA~aaa---la~-~i---l-e---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~  136 (329)
                        ....+++ ..+ ++.+++   ++. +.   + +   + .++.++..+++.+.|+++  ..+.+.  ..-|++..+.+.
T Consensus       293 --~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~  366 (418)
T 3rq1_A          293 --STSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV--GLPMLP--YRGGFFITIPTD  366 (418)
T ss_dssp             --HHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCCC--CCSSSEEEEECT
T ss_pred             --HHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCC--CCceEEEEcCCC
Confidence              0111122 233 333332   322 21   1 1   1 345566666777777665  222221  122333333331


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .            ...+.+.|.++||++.+.   ++.+||.  +.  ..++++|+++++++
T Consensus       367 ~------------~~~~~~~l~~~gi~v~~g---~~~iRis--~~--~~~~~~i~~~~~~l  408 (418)
T 3rq1_A          367 S------------ANAICEELKKEHIYVIAL---ANGIRIA--AC--GIPKCQMTGLAEKI  408 (418)
T ss_dssp             T------------HHHHHHHHHHTTEECEEC---SSEEEEE--GG--GSCHHHHTTHHHHH
T ss_pred             C------------HHHHHHHHHhCCEEEecC---CCCeEEE--Ee--cCCHHHHHHHHHHH
Confidence            0            235677888999999884   4679997  32  22689999999875

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=98.50  E-value=1.1e-06  Score=81.89  Aligned_cols=153  Identities=10%  Similarity=0.086  Sum_probs=96.8

Q ss_pred             cceEEehhHhhchhccchhhh-hcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhcc
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLG-FQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDT   82 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA-~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn   82 (329)
                      | ++|.||++++|+.. .... .+.++....   ++|.++ .| +++|.+++++++++.+..  ..        .+|+.+
T Consensus       168 ~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--~~--------~~~~~~  234 (335)
T 1uu1_A          168 A-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAA-QRVGYVVASEKFIDAYNR--VR--------LPFNVS  234 (335)
T ss_dssp             C-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH--HS--------CTTCSC
T ss_pred             C-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcc-cCeEEEEeCHHHHHHHHH--hc--------CCCCcC
Confidence            7 89999999988642 2222 122222222   579998 77 599999999999887763  11        123444


Q ss_pred             -HHHHH---HHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHH
Q psy7882          83 -VRPHV---QIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDS  156 (329)
Q Consensus        83 -lA~aa---ala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~  156 (329)
                       +++++   +++. +.+++ .+++++..+++.+.|+++  ....   ..+.|.++.+.+..          .-...+.+.
T Consensus       235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~~~~~~----------~~~~~~~~~  299 (335)
T 1uu1_A          235 YVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM--GYRI---TDSRGNFVFVFMEK----------EEKERLLEH  299 (335)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH--TCCB---CCCCSSEEEEECCT----------HHHHHHHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC--CcEE---cCCCCeEEEEECCC----------CCHHHHHHH
Confidence             44433   3333 33444 566777777887777765  2221   23446666666531          113457888


Q ss_pred             HHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         157 CKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       157 l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |.++||++.+.   .+.+|+.+.      +.+|++++++++
T Consensus       300 l~~~gi~v~~~---~~~iRis~~------~~~~i~~~~~~l  331 (335)
T 1uu1_A          300 LRTKNVAVRSF---REGVRITIG------KREENDMILREL  331 (335)
T ss_dssp             HHHHTEEEEEE---TTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHCCEEEEEC---CCeEEEEeC------CHHHHHHHHHHH
Confidence            88999999872   578999862      367899998874

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=98.50  E-value=4.1e-07  Score=89.04  Aligned_cols=176  Identities=14%  Similarity=0.017  Sum_probs=96.2

Q ss_pred             ccccceEEehhHh-hchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVD-FGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVq-TGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..||++||+||++ +|+...|.....  .. ..|     ++|+++ | .+.|.+++++++.+.+.....    ++.++++
T Consensus       210 ~~~g~lli~Dea~~~g~~~~g~~~~~--~~-~~di~~~s~sK~l~-G-~~gG~i~~~~~~~~~l~~~~~----~~~~~~~  280 (447)
T 3h7f_A          210 DEVGAKLLVDMAHFAGLVAAGLHPSP--VP-HADVVSTTVHKTLG-G-GRSGLIVGKQQYAKAINSAVF----PGQQGGP  280 (447)
T ss_dssp             HHHTCEEEEECTTTHHHHHTTSSCCS--TT-TCSEEEEESSGGGC-C-CSCEEEEECGGGHHHHHHHHT----TTTCSSC
T ss_pred             HHcCCEEEEECCchhhhhcCCCCCCC--CC-CCcEEEecCCcCCC-C-CCeEEEEECHHHHHHHhhhcC----CcccCCc
Confidence            3579999999996 677665542211  10 125     469996 4 256778888888877653100    1223332


Q ss_pred             hhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          79 ISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        79 ~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .... .++++++..   +.+++ .+++.+..++|.+.|+++..+.+.+.-+.  ..+.++.+++....     .+   ..
T Consensus       281 ~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~---~~  352 (447)
T 3h7f_A          281 LMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP-----LD---GQ  352 (447)
T ss_dssp             CHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS-----CC---HH
T ss_pred             cHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC-----CC---HH
Confidence            2222 333333332   12233 66788888888888876521111111111  12334555653211     01   23


Q ss_pred             HHHHHHHHCCceee----cc----CCCCCEEEEeCccccCc-CCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLG----RG----GLSGNTLTALQPKLLNY-WTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~----~~----G~~~nvIrl~PPL~It~-~t~eeId~~l~~~  197 (329)
                      .+...+.++||++.    +.    ...++.+|+.+|.+.+. .+++|++++++++
T Consensus       353 ~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l  407 (447)
T 3h7f_A          353 AAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADII  407 (447)
T ss_dssp             HHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHH
Confidence            35556667899987    22    11356799998886432 3689999999975

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=98.50  E-value=1.3e-06  Score=81.69  Aligned_cols=172  Identities=11%  Similarity=0.022  Sum_probs=101.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhh-hhh----------hhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENF-IKI----------KYQ   68 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~-~~~----------~~~   68 (329)
                      .+||+++|+||+++....   ......  ..+|     +.|.++|+. ++|++++++++++.+ .+.          ...
T Consensus       154 ~~~~~~li~D~a~~~~~~---~~~~~~--~~~d~~~~s~~K~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (384)
T 3zrp_A          154 RKYVELIVVDGVSSVGAE---EVKAEE--WNVDVYLTASQKALGSAA-GLGLLLLSPKALSILDSQNSIAGYYLDLRNWL  227 (384)
T ss_dssp             GGGEEEEEEECTTTTTTS---CCCTTT--TTCSEEEEETTSTTCCCS-SEEEEEECHHHHHHHHHCCCSCCSTTCHHHHH
T ss_pred             HhcCCEEEEECcccccCc---cccccc--cCCCEEEecCcccccCCC-ceEEEEECHHHHHHhcCCCCCCcccccHHHHH
Confidence            468999999999873211   111122  2367     359998874 899999999998776 110          000


Q ss_pred             -cCCCCc--cchhh-hcc----HHHHHHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEE
Q psy7882          69 -ILKTPA--HKLKI-SDT----VRPHVQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVD  134 (329)
Q Consensus        69 -~~~~~~--hg~T~-agn----lA~aaala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIe  134 (329)
                       ....+.  +...+ +.+    .++.++++.  +. +++ .++.+++.+++.+.|+++  .......  ..+.|.++.+.
T Consensus       228 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~  305 (384)
T 3zrp_A          228 PVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL--GLEIVARRPESYSNTVTGVI  305 (384)
T ss_dssp             HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSCSSGGGBCSSEEEEE
T ss_pred             HHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC--CCeEccCcccccCccEEEEE
Confidence             000000  11111 122    222233332  11 233 667788888888888876  3332221  12346666777


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.. .         ....+.+.|.++||++.+... ..+.+|+.++...   +++|++++++++
T Consensus       306 ~~~-~---------~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~---~~e~i~~~~~~l  356 (384)
T 3zrp_A          306 LKV-A---------DPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWV---TPNDAIIAISVI  356 (384)
T ss_dssp             CSS-S---------CHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSC---CHHHHHHHHHHH
T ss_pred             CCC-C---------CHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccC---CHHHHHHHHHHH
Confidence            642 1         134688889999999986421 1178999988765   589999999985

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=98.49  E-value=1.3e-06  Score=82.58  Aligned_cols=171  Identities=8%  Similarity=-0.063  Sum_probs=104.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccc---
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK---   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg---   76 (329)
                      ..+|+++|+||+++ +|...    .......+|     +.|.++++. ++|++++++++++.+...... ...+.++   
T Consensus       186 ~~~~~~li~Dea~~-~g~~~----~~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~  258 (393)
T 1vjo_A          186 REFGTLLLVDTVTS-LGGVP----IFLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTK-VANWYLDMNL  258 (393)
T ss_dssp             HHHTCEEEEECTTT-TTTSC----CCTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSC-CSCSTTCHHH
T ss_pred             HHcCCEEEEECCcc-ccCcC----CcccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCC-CCceecCcHh
Confidence            35699999999999 66532    222234578     349999986 899999999988876420000 0011111   


Q ss_pred             ---------hhh-hcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEee
Q psy7882          77 ---------LKI-SDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDLV  136 (329)
Q Consensus        77 ---------~T~-agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef~  136 (329)
                               .++ +.+ .+++++.+. +.+     ++ .++.+++.+++.+.|+++  ....... .|  .+.+..+.+.
T Consensus       259 ~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~  335 (393)
T 1vjo_A          259 LGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI--GLSLHVE-KEYRLPTLTTVCIP  335 (393)
T ss_dssp             HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSC-GGGBCSSEEEEECC
T ss_pred             hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc--CCcccCC-ccccCCcEEEEEcC
Confidence                     122 344 444444433 332     22 567788888888888775  3333221 22  2345666653


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHC-CceeeccCC--CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEH-GLLLGRGGL--SGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      .+.      +   ...+.+.|.++ ||++.+...  ..+.+|+.| ++..   ++++++++++++
T Consensus       336 ~~~------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~---~~~~i~~~~~~l  388 (393)
T 1vjo_A          336 DGV------D---GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNS---RKESVDQLIPAL  388 (393)
T ss_dssp             TTC------C---HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             CCC------C---HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCC---hHHHHHHHHHHH
Confidence            110      1   34588888887 999987421  357999995 5665   467899999875

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=98.49  E-value=5.3e-07  Score=83.16  Aligned_cols=171  Identities=10%  Similarity=-0.017  Sum_probs=99.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhh-hhh--------ccC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIK-IKY--------QIL   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~-~~~--------~~~   70 (329)
                      ..+|+++|+||++ ++|+..  +....++  +|     ..|.++|+. ++|++++++++++.+.. ...        ...
T Consensus       151 ~~~~~~li~D~a~-~~~~~~--~~~~~~~--~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  224 (353)
T 2yrr_A          151 KEAGALFFLDAVT-TLGMLP--FSMRAMG--VDYAFTGSQKCLSAPP-GLAPIAASLEARKAFTGKRGWYLDLARVAEHW  224 (353)
T ss_dssp             HHHTCEEEEECTT-TTTTSC--CCHHHHT--CSEEECCTTSTTCCCS-SCEEEEECHHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred             HHcCCeEEEEcCc-cccccc--ccccccC--ceEEEecCcccccCCC-ceEEEEECHHHHHHhccCCCccccHHHHhhhh
Confidence            3579999999999 576552  2223333  57     359998764 68999999998865530 000        000


Q ss_pred             CCCccchhhhcc-HHHH---HHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC
Q psy7882          71 KTPAHKLKISDT-VRPH---VQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK  142 (329)
Q Consensus        71 ~~~~hg~T~agn-lA~a---aala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~  142 (329)
                      ......+  +.+ .+++   ++++.  +. +++ .++.+++.+++.+.|+++  ...........+.++.+.+...    
T Consensus       225 ~~~~~~~--~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~----  296 (353)
T 2yrr_A          225 ERGGYHH--TTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR--GFRPYPKASPLPTVLVVRPPEG----  296 (353)
T ss_dssp             TTCCCSS--CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCEESCSSSBCTTEEEEECCTT----
T ss_pred             hcCCCCC--CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC--CCccccCccCCCeEEEEECCCC----
Confidence            0011111  223 2222   33322  11 333 567788888888888774  2222221112466667776321    


Q ss_pred             CCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHH-HHHhcc
Q psy7882         143 VPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGT-PCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId-~~l~~~  197 (329)
                        .+   ...+.+.|.++||++.+..  ..++.+|+.++...   +++|++ ++++++
T Consensus       297 --~~---~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~---~~~~~~~~~~~~l  346 (353)
T 2yrr_A          297 --VD---ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEG---ARREAYQAFLKAL  346 (353)
T ss_dssp             --CC---HHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGG---SCHHHHHHHHHHH
T ss_pred             --CC---HHHHHHHHHHCCEEEeCCccccCCCeEEEecCccC---CHHHHHHHHHHHH
Confidence              01   3468888999999998642  13578999986555   357888 888875

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=98.49  E-value=1.1e-06  Score=84.77  Aligned_cols=170  Identities=16%  Similarity=0.035  Sum_probs=99.5

Q ss_pred             ccccceEEehhHhhch--hccc----hhhhh----cccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGS--GDNG----TYLGF----QCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGf--GRTG----~~fA~----e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~   71 (329)
                      ..||+++|.||++.++  +..+    .++..    +..+...+   ++|.++.| +.+|.+++++++.+.+..       
T Consensus       212 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~~~~~-------  283 (427)
T 3ppl_A          212 AAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRKWYTG-------  283 (427)
T ss_dssp             SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH-------
T ss_pred             hcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcC-ccEEEEEcCHHHHHHHHH-------
Confidence            5789999999999984  3333    12222    13344444   57997778 499999999999887764       


Q ss_pred             CCccchhhhcc-HHH---HHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCC
Q psy7882          72 TPAHKLKISDT-VRP---HVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKE  140 (329)
Q Consensus        72 ~~~hg~T~agn-lA~---aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~  140 (329)
                       ..+..+++.+ +++   +++++. +.+++     .+..++.-+.+.+.|++.....+.+. ..-.-|+++.+++...  
T Consensus       284 -~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--  360 (427)
T 3ppl_A          284 -HAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--  360 (427)
T ss_dssp             -HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--
T ss_pred             -HhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--
Confidence             1222333444 333   233333 22222     22333333444444444322222111 1112377888887431  


Q ss_pred             CCCCCChHHHHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                              ....+...|.++||++.++|        ...+.+||.++..    ++++|+++++++
T Consensus       361 --------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~----~~~~i~~~~~~l  413 (427)
T 3ppl_A          361 --------TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP----PVEELEVAMDGV  413 (427)
T ss_dssp             --------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS----CHHHHHHHHHHH
T ss_pred             --------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC----CHHHHHHHHHHH
Confidence                    13457788899999998832        1357899988543    478999999875

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=98.49  E-value=1.5e-06  Score=83.40  Aligned_cols=163  Identities=13%  Similarity=-0.059  Sum_probs=94.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCcccc-ceeeechhHHH-hhhhhhhccCCCCccc-hh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDK-LIVHTSTCTFE-NFIKIKYQILKTPAHK-LK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~Pi-gAv~~~~eI~d-~~~~~~~~~~~~~~hg-~T   78 (329)
                      ..+|+++|+||+++.+. .+..   ..+++...   +.|.++|+..++ |++++++++++ .+..        ..++ .+
T Consensus       177 ~~~~~~li~D~~~~~~~-~~~~---~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~--------~~~~~~~  244 (398)
T 1gc0_A          177 RKHGATVVVDNTYCTPY-LQRP---LELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ--------GLKDMTG  244 (398)
T ss_dssp             GGGTCEEEEECTTTHHH-HCCG---GGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT--------HHHHHTC
T ss_pred             HHcCCEEEEECCCcccc-cCCc---hhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHH--------HhhccCC
Confidence            46799999999998552 2322   12444333   569999765687 88888887665 3332        1222 22


Q ss_pred             hhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee------------------EEeeceeeEEEeec
Q psy7882          79 ISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD------------------VRGKGLMIGVDLVQ  137 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~------------------VRG~GLm~gIef~~  137 (329)
                      .+.+ ++++++++. +.+.. +++..+..+.+.+.|++    ++.+..                  .+|.|.|+.+++..
T Consensus       245 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~----~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  320 (398)
T 1gc0_A          245 AVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLAR----QPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG  320 (398)
T ss_dssp             CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT----CTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred             CCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhc----CCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence            3345 555555544 43322 44444555555555443    232222                  24678899998842


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHCCceeecc--C--------------------------CCCCEEEEeCccccCcCCHHH
Q psy7882         138 DKETKVPLNSRHMTHILDSCKEHGLLLGRG--G--------------------------LSGNTLTALQPKLLNYWTDFV  189 (329)
Q Consensus       138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~--G--------------------------~~~nvIrl~PPL~It~~t~ee  189 (329)
                      +           ...+...+.+.|++....  |                          ...+.||+.+++.   +++++
T Consensus       321 ~-----------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~---~~~~~  386 (398)
T 1gc0_A          321 G-----------IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLE---DIDDL  386 (398)
T ss_dssp             H-----------HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSS---CHHHH
T ss_pred             C-----------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcC---CHHHH
Confidence            1           123445556677765431  1                          1147999999874   36899


Q ss_pred             HHHHHhcc
Q psy7882         190 GTPCLDCE  197 (329)
Q Consensus       190 Id~~l~~~  197 (329)
                      |+.+++++
T Consensus       387 i~~l~~al  394 (398)
T 1gc0_A          387 LADVQQAL  394 (398)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988875

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=98.49  E-value=8.8e-07  Score=85.53  Aligned_cols=170  Identities=5%  Similarity=-0.051  Sum_probs=97.6

Q ss_pred             ccccceEEehhHhhchhccchhhh-h--cccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLG-F--QCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA-~--e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..||+++|.||++..+ ..+..+. .  ...+...+   ++|.+.+| +++|.+++++++.+.+..        ..+..+
T Consensus       236 ~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~l~~~~~~--------~~~~~~  305 (444)
T 3if2_A          236 KRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-MRTGIIVADAKVIEAVSA--------MNAVVN  305 (444)
T ss_dssp             HHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHHHH
T ss_pred             HHCCCEEEEECCCCCc-ccccccccccccCCCCEEEEechhhccCCC-CceEEEEECHHHHHHHHH--------HHHhcc
Confidence            4689999999999633 1111100 0  01122222   56987677 499999999999887764        234455


Q ss_pred             hhcc-HHHHHHH---Hh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          79 ISDT-VRPHVQI---KK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        79 ~agn-lA~aaal---a~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      ++.+ ++++++.   +. +..+.     .++.++.-+.+.+.|++.....+........|+++.+++....     .+  
T Consensus       306 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~--  378 (444)
T 3if2_A          306 LAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP-----IS--  378 (444)
T ss_dssp             SSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS-----SC--
T ss_pred             CCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC-----CC--
Confidence            5555 5444433   33 22211     1223334444444444432222211112255788888885311     11  


Q ss_pred             HHHHHHHHHHHCCceeeccCCC------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGLS------------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~~------------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+...|.++||++.+....            .+.+||.++.     ++++|+++++++
T Consensus       379 -~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-----~~e~i~~~l~~l  433 (444)
T 3if2_A          379 -TLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-----DEQTLIDGIKVI  433 (444)
T ss_dssp             -HHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-----CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-----CHHHHHHHHHHH
Confidence             345778889999999874321            1589999885     479999999975

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=98.48  E-value=9.5e-07  Score=82.47  Aligned_cols=159  Identities=5%  Similarity=-0.081  Sum_probs=98.2

Q ss_pred             cceEEehhHhhchhccchhhh--hcccCCcch---HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLG--FQCLQICRF---VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA--~e~~GV~PD---i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      +.++|.||++.+|+..|....  .+.++....   ++|.++ .| +.+|.+++++++.+.+..        ..  .+++.
T Consensus       160 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~--~~~~~  228 (350)
T 3fkd_A          160 DTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPG-LRIGYIVANKDFMKRVAA--------FS--TPWAV  228 (350)
T ss_dssp             TSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGG-GCCEEEECCHHHHHHHHT--------TC--CTTCS
T ss_pred             CCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcc-hheEeEEeCHHHHHHHHH--------hC--CCCCC
Confidence            359999999999987765322  111221122   579998 67 499999999999887763        11  23444


Q ss_pred             c-HHHHHH---HHh-h-HHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          82 T-VRPHVQ---IKK-S-VLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        82 n-lA~aaa---la~-~-ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      + ++++++   ++. + ..+++.+..+..+++.+.|+    ++|.+.-..+.|.++.+.+...          -...+.+
T Consensus       229 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~  294 (350)
T 3fkd_A          229 NALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALN----RLDGVEVHPSGTTFFLLRLKKG----------TAAELKK  294 (350)
T ss_dssp             CHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHH----HSTTEEECCCSSSEEEEEESSS----------CHHHHHH
T ss_pred             CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEECCCCCcEEEEECCCC----------CHHHHHH
Confidence            4 444333   333 2 33333333344555555554    3454444556677777777431          1346888


Q ss_pred             HHHH-CCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKE-HGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e-~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.+ +||++.++..    ..+.+|+...      +.+|++++++++
T Consensus       295 ~L~~~~gi~v~~g~~f~~~~~~~iRis~~------~~~~~~~l~~al  335 (350)
T 3fkd_A          295 YMLEEYNMLIRDASNFRGLDESYVRITTQ------RPAQNQLFIKAL  335 (350)
T ss_dssp             HHHHTTCEECEECTTSTTCCTTEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHHCCEEEEeCccCCCCCCCEEEEEcC------CHHHHHHHHHHH
Confidence            8888 9999987531    2678999753      467888888774

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=98.48  E-value=8.6e-07  Score=84.73  Aligned_cols=174  Identities=9%  Similarity=-0.011  Sum_probs=99.8

Q ss_pred             ccccceEEehhHhhchhccch-----hhhhcccCCcch------HHHhhc-CCccccceeeechh--HHHhhhhhhhccC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-----YLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTC--TFENFIKIKYQIL   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-----~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~e--I~d~~~~~~~~~~   70 (329)
                      ..||+++|+||+++++.++|.     +.....++..++      ++|.++ .| +++|.++++++  +++.+... ..  
T Consensus       207 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~-~~--  282 (416)
T 1bw0_A          207 EELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEG-LK--  282 (416)
T ss_dssp             HHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHH-HH--
T ss_pred             HHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHH-HH--
Confidence            357999999999999877664     223332332222      469975 55 58999998774  55544320 00  


Q ss_pred             CCCccchhhhcc-HHHHHHHHh-h-----HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCC
Q psy7882          71 KTPAHKLKISDT-VRPHVQIKK-S-----VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKET  141 (329)
Q Consensus        71 ~~~~hg~T~agn-lA~aaala~-~-----ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~  141 (329)
                        ..+..+++.+ ++++++.+. +     .+++ .+++++..+++.+.|+    ++|.+..++. .|.++.+.+......
T Consensus       283 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~g~~~~~~~~~~~~~~~~~~~~~~  356 (416)
T 1bw0_A          283 --RVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG----ECIGLAPTMPRGAMYLMSRIDLEKYR  356 (416)
T ss_dssp             --HHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHT----TSTTEEECCCCBTTEEEEEECGGGBS
T ss_pred             --HHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH----hCCCCcccCCCeeEEEEEeCCHHHcC
Confidence              0123456666 555544433 2     2222 4455555555555554    3443433333 366777777421000


Q ss_pred             CCCCChHHHHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..   .-...+...|+ ++||++.++..  .++.+|+.+.  .   ++++|++.++.+
T Consensus       357 -~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~---~~e~l~~~l~~l  406 (416)
T 1bw0_A          357 -DI---KTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--R---PVEVYREAVERI  406 (416)
T ss_dssp             -SC---CSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--S---CHHHHHHHHHHH
T ss_pred             -CC---CCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--C---CHHHHHHHHHHH
Confidence             00   01345777774 89999987431  2478999883  2   578999999875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=98.47  E-value=9.8e-08  Score=89.26  Aligned_cols=166  Identities=11%  Similarity=-0.011  Sum_probs=103.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHh-hhhhhhccCCCCccch-
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFEN-FIKIKYQILKTPAHKL-   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~-~~~~~~~~~~~~~hg~-   77 (329)
                      ..||+++|.||+++++ ..+  +....++  +|     ++|.+++|. ++|++++++++++. +..  ..  ....+.. 
T Consensus       174 ~~~~~~li~D~a~~~~-~~~--~~~~~~~--~di~~~s~sK~~~~~~-~~G~~~~~~~~~~~~~~~--~~--~~~~~~~~  243 (371)
T 2e7j_A          174 SEYDVPLLVNGAYAIG-RMP--VSLKEIG--ADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVLRR--SE--KYKNKEVE  243 (371)
T ss_dssp             HTTTCCEEEECTTTBT-TBC--CCHHHHT--CSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTTCB--CS--SCTTSBGG
T ss_pred             HHcCCeEEEECccccC-CCC--CChhhcC--CCEEEecCCcCCCCCC-CcEEEEEechhhhhhccc--cc--cCcccccc
Confidence            3579999999999864 332  1223333  67     579999986 99999999988766 542  00  0011100 


Q ss_pred             --hhhcc-HHHHHHHHh-hHHh-H-HHHH--HHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          78 --KISDT-VRPHVQIKK-SVLE-R-FVHT--YVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        78 --T~agn-lA~aaala~-~ile-~-le~v--~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                        +++.+ .+++++.+. +.++ + .+++  +++.+++.+.|+++  ....+...++.|.++.+++. +           
T Consensus       244 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~-~-----------  309 (371)
T 2e7j_A          244 LLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL--GIKQLGDNPHNHDLMFFHAE-V-----------  309 (371)
T ss_dssp             GTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHT--TCEEESSSSCCSSEEEEECH-H-----------
T ss_pred             cccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CcEEecCCCccCceEEEECC-C-----------
Confidence              33445 555444444 4443 2 5677  88888888888775  22222222224667777763 1           


Q ss_pred             HHHHHHHHHHCCceeecc-------CCCCCEEE-EeCccc-cCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRG-------GLSGNTLT-ALQPKL-LNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~-------G~~~nvIr-l~PPL~-It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++.+.       |...+.+| +.++.. .   +++|++++++++
T Consensus       310 ~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~---~~~~i~~~~~~l  363 (371)
T 2e7j_A          310 LYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGL---SDEEVDYVLNAF  363 (371)
T ss_dssp             HHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCC---CHHHHHHHHHHH
Confidence            245777788899988761       21256788 877754 4   589999999975

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=98.47  E-value=2.3e-06  Score=80.09  Aligned_cols=173  Identities=13%  Similarity=-0.025  Sum_probs=104.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC--------C
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--------K   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--------~   71 (329)
                      ..||+++|+||+++.+ ...  +....+  .+|     +.|.++++. ++|++++++++++.+.+......        .
T Consensus       173 ~~~~~~li~D~a~~~~-~~~--~~~~~~--~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (386)
T 2dr1_A          173 KEHDKLVFVDAVSAMG-GAD--IKFDKW--GLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVK  246 (386)
T ss_dssp             HHTTCEEEEECTTTBT-TBC--CCTTTT--TCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHH
T ss_pred             HHcCCeEEEEcccccc-Ccc--cccccc--CCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHH
Confidence            3579999999998743 221  222222  357     459999874 68999999998876531000000        0


Q ss_pred             CC--ccchhhhcc-HHHHHHHHh-hH------HhH-HHHHHHHHHHHHHHHHHHHHhCCceee-EEeeceeeEEEeecCC
Q psy7882          72 TP--AHKLKISDT-VRPHVQIKK-SV------LER-FVHTYVVGNFLLTHLSKLREEFAIVGD-VRGKGLMIGVDLVQDK  139 (329)
Q Consensus        72 ~~--~hg~T~agn-lA~aaala~-~i------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~-VRG~GLm~gIef~~d~  139 (329)
                      ..  ....+++.+ .+++++.+. +.      +++ .++.+++.+++.+.|+++  ....... -...|.++.+.+....
T Consensus       247 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~  324 (386)
T 2dr1_A          247 YLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI--GLDILAEPGHESPTITAVLTPPGI  324 (386)
T ss_dssp             HHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSCTTCBCSSEEEEECCTTC
T ss_pred             hhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc--CCeeCcCccccCCceEEEEcCCCC
Confidence            00  011233444 444333333 22      333 677888888888888875  2332211 0115778888874211


Q ss_pred             CCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         140 ETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                               ....+.+.|.++||++.+...  ..+.+|+.++...   +++|++++++++
T Consensus       325 ---------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  372 (386)
T 2dr1_A          325 ---------KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYM---KFEDIQEMLDNL  372 (386)
T ss_dssp             ---------CHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSC---CHHHHHHHHHHH
T ss_pred             ---------CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence                     134688889999999987421  2579999988755   589999999975

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=98.45  E-value=1.4e-06  Score=80.74  Aligned_cols=163  Identities=12%  Similarity=-0.003  Sum_probs=93.0

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccc-cceeeech-hHHHhhhhhhhccCCCCccc-hhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWD-KLIVHTST-CTFENFIKIKYQILKTPAHK-LKIS   80 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~P-igAv~~~~-eI~d~~~~~~~~~~~~~~hg-~T~a   80 (329)
                      +|+++|+||+++.+ ....  .. .++....   ++|.++++..+ .|++++++ ++.+.+..        ..++ .+.+
T Consensus       113 ~~~~li~D~a~~~~-~~~~--~~-~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~--------~~~~~~~~~  180 (331)
T 1pff_A          113 KDILVIVDNTFASP-ILTN--PL-DLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQ--------GIKDITGAI  180 (331)
T ss_dssp             SSCEEEEECTTTHH-HHCC--GG-GGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHT--------CCCCCCCCC
T ss_pred             cCCEEEEECCCccc-ccCC--hh-hcCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHH--------HHHhhcCCC
Confidence            89999999999743 2211  11 2342222   56999875457 68888998 88877653        2233 3344


Q ss_pred             cc-HHHHHHHHh-hHHh----H-HHHHHHHHHHHHHHHHHHH-------HhCCce----eeEEeeceeeEEEeecCCCCC
Q psy7882          81 DT-VRPHVQIKK-SVLE----R-FVHTYVVGNFLLTHLSKLR-------EEFAIV----GDVRGKGLMIGVDLVQDKETK  142 (329)
Q Consensus        81 gn-lA~aaala~-~ile----~-le~v~~lG~~L~~gL~eL~-------~~~p~v----~~VRG~GLm~gIef~~d~~~~  142 (329)
                      .+ +++.++++. +.+.    . .+++..+.+++.+. .++.       .++|.+    ...+|.|.|+++++. +    
T Consensus       181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~----  254 (331)
T 1pff_A          181 ISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEH-KAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD-G----  254 (331)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-S----
T ss_pred             CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcC-CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C----
Confidence            55 455443333 2221    1 23344444443321 0000       111110    122567889988874 1    


Q ss_pred             CCCChHHHHHHHHHHHHCCceeecc----------------------------CCCCCEEEEeCccccCcCCHHHHHHHH
Q psy7882         143 VPLNSRHMTHILDSCKEHGLLLGRG----------------------------GLSGNTLTALQPKLLNYWTDFVGTPCL  194 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~e~GVLl~~~----------------------------G~~~nvIrl~PPL~It~~t~eeId~~l  194 (329)
                             ...+.+.+.++||+++..                            |...+.+|+.+++..   ++++|+.++
T Consensus       255 -------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~---t~~~i~~l~  324 (331)
T 1pff_A          255 -------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCEN---VQDIIDDLK  324 (331)
T ss_dssp             -------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSC---HHHHHHHHH
T ss_pred             -------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCC---HHHHHHHHH
Confidence                   124667778899977532                            112479999999754   689999999


Q ss_pred             hcc
Q psy7882         195 DCE  197 (329)
Q Consensus       195 ~~~  197 (329)
                      +++
T Consensus       325 ~~l  327 (331)
T 1pff_A          325 QAL  327 (331)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=98.45  E-value=1.3e-06  Score=83.19  Aligned_cols=170  Identities=11%  Similarity=-0.031  Sum_probs=97.2

Q ss_pred             ccccceEEehhH-hhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAV-DFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEV-qTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+||+++|+||+ .+|+.+.|..+....   .+|     ++|+++|+  ..|.++++ +++.+.+..  .     ..++.
T Consensus       197 ~~~~~~li~De~~~~g~~~~~~~~~~~~---~~di~~~s~sK~l~g~--~~g~~~~~~~~~~~~~~~--~-----~~~~~  264 (425)
T 3ecd_A          197 DSVGAKLMVDMAHIAGVIAAGRHANPVE---HAHVVTSTTHKTLRGP--RGGFVLTNDEEIAKKINS--A-----VFPGL  264 (425)
T ss_dssp             HHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSGGGCCC--SCEEEEESCHHHHHHHHH--H-----HC---
T ss_pred             HHcCCEEEEECcChHhhhhcccccCchh---cCcEEEecCCcccCCC--CcEEEEeCCHHHHHHHHh--h-----hCccc
Confidence            457999999999 467766654322111   156     45999553  46777777 466665543  1     11111


Q ss_pred             hhhcc--HHH--HHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          78 KISDT--VRP--HVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        78 T~agn--lA~--aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +.+.+  ..+  ++++..   +.+++ .+++.++.++|.+.|+++  ....+. -.+.+.++.+.+.....        .
T Consensus       265 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~~~~~~~~~~~~~~~--------~  333 (425)
T 3ecd_A          265 QGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG--GVDLVT-GGTDNHLLLVDLRPKGL--------K  333 (425)
T ss_dssp             --CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGG-GSCSSSEEEEECGGGTC--------C
T ss_pred             cCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC--CCeecc-CCCCceEEEEEeCCCCC--------C
Confidence            11111  222  222211   12222 567888888888888763  111111 11356677777753110        1


Q ss_pred             HHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||++.+..        ...+.+|+.||...+ .++++|++++++++
T Consensus       334 ~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l  390 (425)
T 3ecd_A          334 GAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI  390 (425)
T ss_dssp             HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHH
Confidence            3456777888999998321        123589999887653 44589999999985

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=98.45  E-value=1.3e-07  Score=90.46  Aligned_cols=162  Identities=10%  Similarity=-0.046  Sum_probs=95.3

Q ss_pred             ccccceEEehhHhhchhccc---hhhhhcccCCcch-------HHHhhcC-Cccccceeee---chhHHHhhhhhhhccC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG---TYLGFQCLQICRF-------VQKDFKG-SFWDKLIVHT---STCTFENFIKIKYQIL   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG---~~fA~e~~GV~PD-------i~KaLgG-G~~PigAv~~---~~eI~d~~~~~~~~~~   70 (329)
                      ..||+++|+||++++|+++|   ..++...+...+|       ++|+++. | +++|++++   ++++++.+.....   
T Consensus       213 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~---  288 (412)
T 1ajs_A          213 KRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLSQMQ---  288 (412)
T ss_dssp             HHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHH---
T ss_pred             HHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHHHHH---
Confidence            35799999999999999886   4555554432344       4699998 8 49999998   8886554432000   


Q ss_pred             CCCccchhhhc-c-HHHHHHHHh-h----------HHhH-HHHHHHHHHHHHHHHHHHHHhCC-ceeeEE-eeceeeEEE
Q psy7882          71 KTPAHKLKISD-T-VRPHVQIKK-S----------VLER-FVHTYVVGNFLLTHLSKLREEFA-IVGDVR-GKGLMIGVD  134 (329)
Q Consensus        71 ~~~~hg~T~ag-n-lA~aaala~-~----------ile~-le~v~~lG~~L~~gL~eL~~~~p-~v~~VR-G~GLm~gIe  134 (329)
                        ..+..++++ + ++++++.+. +          .+++ .+++++..++|.+.|+++.  .| .+.-+. ..|++..+.
T Consensus       289 --~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~~~~~~~~~~  364 (412)
T 1ajs_A          289 --KIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK--TPGTWNHITDQIGMFSFTG  364 (412)
T ss_dssp             --HHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSCCHHHHHCCSSEEECC
T ss_pred             --HHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCCeeEEcCCCceEEEeC
Confidence              113344543 5 555544433 2          1222 5567777777777777642  11 111112 223333222


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +          +   ...+...+.++||++.++      +|+.... +   +++|++++++++
T Consensus       365 ~----------~---~~~~~~~l~~~gv~v~~~------~Ris~~~-~---~~~~i~~~~~~l  404 (412)
T 1ajs_A          365 L----------N---PKQVEYLINQKHIYLLPS------GRINMCG-L---TTKNLDYVATSI  404 (412)
T ss_dssp             C----------C---HHHHHHHHHTTCEECCTT------SEEEGGG-C---CTTTHHHHHHHH
T ss_pred             C----------C---HHHHHHHHHhCCEEecCC------cEEEeee-C---CHHHHHHHHHHH
Confidence            2          1   123455566899999863      4676552 2   468899999875

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=98.43  E-value=7.5e-07  Score=85.89  Aligned_cols=136  Identities=13%  Similarity=-0.004  Sum_probs=83.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeec-hhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTS-TCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||+++.+      +.+...+..+|     +.|.++++. +..|+++++ +++++.+..        ..+..
T Consensus       178 ~~~g~~li~D~~~~~~------~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~--------~~~~~  243 (392)
T 3qhx_A          178 ADSSAKVLVDNTFASP------ALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF--------LQNGA  243 (392)
T ss_dssp             HHHTCEEEEECTTTCT------TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH--------HHHHH
T ss_pred             HHcCCEEEEECCCccc------ccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH--------HHHhc
Confidence            3579999999999732      22344455678     459999853 457888887 577776653        22333


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------------EeeceeeEEEee
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------------RGKGLMIGVDLV  136 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------------RG~GLm~gIef~  136 (329)
                      ++..+ +++..++.. +.++. +++..+..+++.+.|+    ++|.+..|                  ||.|.|++|+|.
T Consensus       244 g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~----~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~  319 (392)
T 3qhx_A          244 GAVPGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLA----EHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR  319 (392)
T ss_dssp             CCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH----TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred             CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----cCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC
Confidence            44445 555555544 33322 4455555555555443    45555555                  788999999995


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeec
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~  166 (329)
                      .+        ......++..+...|+.+..
T Consensus       320 ~~--------~~~~~~~~~~l~~~~~~~s~  341 (392)
T 3qhx_A          320 AG--------RTAAEQLCAKTNIFILAESL  341 (392)
T ss_dssp             TC--------HHHHHHHHHHCSSSEECSCC
T ss_pred             Cc--------HHHHHHHHHhCCCceECCCC
Confidence            31        13455677777666665543

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=98.42  E-value=1.1e-07  Score=90.14  Aligned_cols=163  Identities=13%  Similarity=-0.023  Sum_probs=92.7

Q ss_pred             ccccceEEehhHhhchhccc--hhhhhcccC-Ccch------HHHhhc-CCccccceeee---chhHHHhhhhhhhccCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG--TYLGFQCLQ-ICRF------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQILK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG--~~fA~e~~G-V~PD------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~~   71 (329)
                      ..+|+++|.||++++|+++|  .......+. ..+|      ++|+++ +| +++|++++   ++++++.+.....    
T Consensus       199 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~----  273 (394)
T 2ay1_A          199 EKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMA----  273 (394)
T ss_dssp             HHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHH----
T ss_pred             HHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHH----
Confidence            35799999999999998765  333333232 2244      469998 77 49999988   6766554432000    


Q ss_pred             CCccchhhhc-c-HHHHHHHHh-h----------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEee
Q psy7882          72 TPAHKLKISD-T-VRPHVQIKK-S----------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLV  136 (329)
Q Consensus        72 ~~~hg~T~ag-n-lA~aaala~-~----------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~  136 (329)
                       ..+..++++ + ++++++.+. +          .+++ .+++++..++|.+.|+++....+ +.-+. .-|+++.+++.
T Consensus       274 -~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~  351 (394)
T 2ay1_A          274 -FLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDR-FGFVAEHRGMFSRLGAT  351 (394)
T ss_dssp             -HHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST-TTHHHHCCSSEEECCCC
T ss_pred             -HHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-eeEEcCCceEEEeeCCC
Confidence             012223332 4 444444332 1          1222 45566667777777766531101 11112 23555444331


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                                .   ..+...+.++||++.++      +|+.++. +   +++|++++++++
T Consensus       352 ----------~---~~~~~~l~~~gi~v~~~------~Ris~~~-~---~~~~i~~~~~~l  389 (394)
T 2ay1_A          352 ----------P---EQVKRIKEEFGIYMVGD------SRINIAG-L---NDNTIPILARAI  389 (394)
T ss_dssp             ----------H---HHHHHHHHHHCEECCTT------CEEEGGG-C---CTTTHHHHHHHH
T ss_pred             ----------H---HHHHHHHHhCCEEecCC------CeEEeec-C---CHhhHHHHHHHH
Confidence                      1   23566777899999763      4787763 3   468999999875

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=98.36  E-value=9.2e-07  Score=83.96  Aligned_cols=174  Identities=11%  Similarity=0.008  Sum_probs=101.8

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch---HH----HhhcCCccccceeeech-hHHHhhhhhhhccCC----
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTST-CTFENFIKIKYQILK----   71 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~~-eI~d~~~~~~~~~~~----   71 (329)
                      ..+|+++|.||+++ |....+     ...+..+|   ++    |+++||  ..|++++++ ++.+.+.........    
T Consensus       168 ~~~~~~li~D~a~~~g~~~~~-----~~~~~~~di~~~S~s~~K~l~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~  240 (391)
T 3dr4_A          168 RRHNLLVIEDAAEAVGATYRG-----KKSGSLGDCATFSFFGNAIITTG--EGGMITTNDDDLAAKMRLLRGQGMDPNRR  240 (391)
T ss_dssp             HHTTCEEEEECTTCTTCEETT-----EETTSSSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHHBTTCCTTST
T ss_pred             HHcCCEEEEECcccccceECC-----eeecccCCEEEEECCCCCcCCcC--CeEEEEECCHHHHHHHHHHHhcCCCCCCc
Confidence            45799999999987 332222     24455567   34    999886  366666654 466554420000000    


Q ss_pred             --CCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee-----EEeeceeeEEEeecCCCC
Q psy7882          72 --TPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD-----VRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        72 --~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~-----VRG~GLm~gIef~~d~~~  141 (329)
                        ....+..+..+ ++++.++.. +.+++ .++.+++.+++.+.|+++  .......     .++.+.++.+.+..... 
T Consensus       241 ~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  317 (391)
T 3dr4_A          241 YWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL--GNRVTKPHVALTGRHVFWMYTVRLGEGLS-  317 (391)
T ss_dssp             TCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG--TTSEECCCCCTTSCCCCSSEEEEECSSCS-
T ss_pred             ccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CccccCcCCCCCCcceeEEEEEEECCccc-
Confidence              01122335555 666666555 44554 677888888888888876  2222211     23445566777743111 


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCC----------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGL----------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~----------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         .   ....+.+.|.++||.+.+...                      ...++++.+....   |++|||.+++++
T Consensus       318 ---~---~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~---t~edi~~~~~~l  386 (391)
T 3dr4_A          318 ---T---TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGL---TEADIDRVIAAL  386 (391)
T ss_dssp             ---S---CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             ---h---hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCC---CHHHHHHHHHHH
Confidence               1   135688899999999885310                      1245666444444   689999999975

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=98.35  E-value=8.8e-07  Score=84.86  Aligned_cols=168  Identities=10%  Similarity=-0.047  Sum_probs=94.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHH-hhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFE-NFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d-~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||++..+ ..+...   .+|  +|     ++|.++|...|+ |++++++++++ .+..        ..++.
T Consensus       176 ~~~~~~li~De~~~~~-~~~~~~---~~~--~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~--------~~~~~  241 (398)
T 2rfv_A          176 HQQGALLVVDNTFMSP-YCQQPL---QLG--ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV--------GLKDI  241 (398)
T ss_dssp             HHTTCEEEEECTTTCT-TTCCGG---GGT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT--------HHHHT
T ss_pred             HHcCCEEEEECCCccc-ccCCch---hhC--CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH--------HHHhC
Confidence            3579999999998843 222221   233  56     469998754688 89999998876 4432        12222


Q ss_pred             -hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHH----------HHhCCcee----eEEeeceeeEEEeecCC
Q psy7882          78 -KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKL----------REEFAIVG----DVRGKGLMIGVDLVQDK  139 (329)
Q Consensus        78 -T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL----------~~~~p~v~----~VRG~GLm~gIef~~d~  139 (329)
                       +++.+ ++++++++. +.+.. +++..+..+.+.+.|++.          ...+|.+.    +.++.|.|+.+++... 
T Consensus       242 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~-  320 (398)
T 2rfv_A          242 TGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG-  320 (398)
T ss_dssp             TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH-
T ss_pred             CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC-
Confidence             33455 555555554 33322 334444444444444331          01111110    1246789999988521 


Q ss_pred             CCCCCCChHHHHHHHHHHHHCCceeecc-------------------------CCCCCEEEEeCccccCcCCHHHHHHHH
Q psy7882         140 ETKVPLNSRHMTHILDSCKEHGLLLGRG-------------------------GLSGNTLTALQPKLLNYWTDFVGTPCL  194 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~-------------------------G~~~nvIrl~PPL~It~~t~eeId~~l  194 (329)
                             ......+...+...|+.+.+.                         |...+.+|+.+++..   ++++|+.++
T Consensus       321 -------~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~---~~~~i~~l~  390 (398)
T 2rfv_A          321 -------LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLED---PEDIINDLE  390 (398)
T ss_dssp             -------HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSC---HHHHHHHHH
T ss_pred             -------HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHH
Confidence                   122344555555556654432                         112589999999744   689999998


Q ss_pred             hcc
Q psy7882         195 DCE  197 (329)
Q Consensus       195 ~~~  197 (329)
                      +++
T Consensus       391 ~al  393 (398)
T 2rfv_A          391 HAI  393 (398)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=98.32  E-value=1.6e-06  Score=81.43  Aligned_cols=173  Identities=10%  Similarity=-0.006  Sum_probs=97.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcC-Cccccceeeech-hHHHhhhhhhh-ccCCCC-
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKG-SFWDKLIVHTST-CTFENFIKIKY-QILKTP-   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgG-G~~PigAv~~~~-eI~d~~~~~~~-~~~~~~-   73 (329)
                      ..+|+++|+||+++.+..    +..+.++..+|   .+    |.+++ |.  .|++++++ ++.+.+..... +....+ 
T Consensus       149 ~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~~~s~~~~K~l~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (374)
T 3uwc_A          149 KKHNLHIVEDACQTILGR----INDKFVGSWGQFACFSLHPLKNLNVWSD--AGVIITHSDEYAEKLRLYRNHGLINRDV  222 (374)
T ss_dssp             HHTTCEEEEECTTCTTCE----ETTEETTSSSSEEEEECSSSSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTE
T ss_pred             HHcCCEEEEeCCCccCce----eCCeeccccccEEEEeCCCCCcCCccce--eEEEEeCCHHHHHHHHHHHhcCccccCc
Confidence            457999999999984322    44456676678   23    99988 63  66676654 56655442000 000011 


Q ss_pred             --ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHH--hCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          74 --AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLRE--EFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        74 --~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~--~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                        ..+.++..+ ++++.++.. +.+++ .++.+++.+++.+.|+++..  +.+...+.+ ...+..+.+...        
T Consensus       223 ~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------  293 (374)
T 3uwc_A          223 CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGV-YHVFHIYVLRVK--------  293 (374)
T ss_dssp             ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTE-ECCCSSEEEEET--------
T ss_pred             cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCC-ceeeEEEEEEcC--------
Confidence              123344444 555555554 44554 67788888888888776521  111111111 111112222111        


Q ss_pred             hHHHHHHHHHHHHCCceeeccCCC-------------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGLS-------------------------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~~-------------------------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        -...+.+.|.++||.+.+..+.                         .+.+|+.+....   |++||+++++++
T Consensus       294 --~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~---t~edi~~~~~~l  364 (374)
T 3uwc_A          294 --YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYL---TEEEINYIIKKV  364 (374)
T ss_dssp             --THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTS---CHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCC---CHHHHHHHHHHH
Confidence              1346888899999988764200                         156777555444   689999999985

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=98.32  E-value=9.7e-06  Score=76.75  Aligned_cols=172  Identities=11%  Similarity=0.053  Sum_probs=98.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC---------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL---------   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~---------   70 (329)
                      ..+|+++|+||+++ +|...  +....++  +|     +.|.+ |+ .++|++++++++++.+........         
T Consensus       196 ~~~~~~li~D~a~~-~~~~~--~~~~~~~--~di~~~s~sK~~-~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (420)
T 1t3i_A          196 HQAGAKVLVDACQS-APHYP--LDVQLID--CDWLVASGHKMC-AP-TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDH  268 (420)
T ss_dssp             HHTTCEEEEECTTT-TTTSC--CCHHHHT--CSEEEEEGGGTT-SC-TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSC
T ss_pred             HHcCCEEEEEhhhc-cCCcc--CchhhcC--CCEEEEehhhhc-CC-CceEEEEEchHHHhhcCceecCCCccccccccc
Confidence            35799999999987 33331  1223333  67     45954 44 258999999998877643000000         


Q ss_pred             ---CCCccchhhhcc-HHHHHHHH-h-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE---eeceeeEEEe
Q psy7882          71 ---KTPAHKLKISDT-VRPHVQIK-K-SVL-----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR---GKGLMIGVDL  135 (329)
Q Consensus        71 ---~~~~hg~T~agn-lA~aaala-~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR---G~GLm~gIef  135 (329)
                         ....+..+++.+ +++++++. . +.+     ++ .++.+++.+++.+.|+++. ....+...+   +.|.++.+.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~  347 (420)
T 1t3i_A          269 FTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIP-QLRLYGPNPKHGDRAALASFNV  347 (420)
T ss_dssp             EEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCT-TEEEESCCGGGSCBCSEEEEEE
T ss_pred             cCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCccccccCCEEEEEE
Confidence               000001112233 44444443 2 333     22 5566677777777776531 111111111   3488888886


Q ss_pred             ecCCCCCCCCChHHHHHHHHHHHHCCceeeccC---------CC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         136 VQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG---------LS-GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       136 ~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G---------~~-~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .. .      +   ...+.+.|.++||++.+..         .. .+.+|+.++...   +++|++++++++
T Consensus       348 ~~-~------~---~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~---~~~~i~~~~~~l  406 (420)
T 1t3i_A          348 AG-L------H---ASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYN---TKEEIDLFLQSL  406 (420)
T ss_dssp             TT-B------C---HHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTC---CHHHHHHHHHHH
T ss_pred             CC-C------C---HHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCC---CHHHHHHHHHHH
Confidence            31 1      1   2357788889999998741         01 578999988765   589999999875

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=98.32  E-value=2e-06  Score=84.82  Aligned_cols=175  Identities=8%  Similarity=-0.061  Sum_probs=100.5

Q ss_pred             ccccceEEehhHhhchhcc-------chh--hhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhh---hhhcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDN-------GTY--LGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIK---IKYQI   69 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRT-------G~~--fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~---~~~~~   69 (329)
                      ..+|++||+||+++|+.+.       |..  +.....|+..-   ..|.+.||. ++|+++++++.+.....   .....
T Consensus       233 ~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~  311 (497)
T 3mc6_A          233 QKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPK-GSSVIMYRNSDLRMHQYYVNPAWTG  311 (497)
T ss_dssp             HHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCS-SCEEEECSSHHHHTTTSCCBTTCTT
T ss_pred             HHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCC-CceeEEecCHHHHhhhhcccccccC
Confidence            4679999999999988664       211  33444555221   349887774 89999998877654321   00000


Q ss_pred             ---CCCCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          70 ---LKTPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        70 ---~~~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                         ......++.+.+. +++.++++.   +-+++ .++..++.+++.+.|++.......+..  ..+.++.+...  .  
T Consensus       312 ~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~--~--  385 (497)
T 3mc6_A          312 GLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN--PRYSVISFSSK--T--  385 (497)
T ss_dssp             SCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC--CCSSEEEEECT--T--
T ss_pred             CCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--CCeeEEEEeCC--C--
Confidence               0011122222222 344444443   22233 667778888888888763111211211  33444444421  1  


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                            .-...+.+.|.++||++.... .++.+|+.++ .+   +++|++++++++
T Consensus       386 ------~~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~---t~e~i~~~~~~L  430 (497)
T 3mc6_A          386 ------LNIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RL---SAHVVDEICDIL  430 (497)
T ss_dssp             ------TTHHHHHHHHHTTTCBCEECC-SSCCEEEECC-TT---TTCTHHHHHHHH
T ss_pred             ------CCHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CC---CHHHHHHHHHHH
Confidence                  014568899999999887653 3567788877 33   578999999875

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=98.30  E-value=2.8e-06  Score=80.56  Aligned_cols=169  Identities=10%  Similarity=-0.023  Sum_probs=93.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccc-eeeechhHHHhhhhhhhccCC---CCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKL-IVHTSTCTFENFIKIKYQILK---TPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pig-Av~~~~eI~d~~~~~~~~~~~---~~~h   75 (329)
                      ..+|+++|+||+++ +|...  +..+.++  +|     +.|.++ +  .+| ++++++++.+.+.+.......   ....
T Consensus       192 ~~~~~~li~D~a~~-~g~~~--~~~~~~~--~d~~~~s~~K~~g-~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  263 (406)
T 3cai_A          192 HDVGALVVVDHSAA-APYRL--LDIRETD--ADVVTVNAHAWGG-P--PIGAMVFRDPSVMNSFGSVSTNPYATGPARLE  263 (406)
T ss_dssp             HHTTCEEEEECTTT-TTTCC--CCHHHHC--CSEEEEEGGGGTS-C--SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGC
T ss_pred             HHcCCEEEEEcccc-cCCCC--CCchhcC--CCEEEeehhhhcC-C--CcCeEEEEehHHHhhcCCcccCCCCCcccccc
Confidence            35799999999997 33221  2223334  57     469654 3  288 888999887765420000000   0000


Q ss_pred             chhhhcc-HH---HHHHHHh-h----------------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEE
Q psy7882          76 KLKISDT-VR---PHVQIKK-S----------------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGV  133 (329)
Q Consensus        76 g~T~agn-lA---~aaala~-~----------------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gI  133 (329)
                      .+|  .+ .+   +.++++. +                .+++ .++++++.+++.+.|+++. .........+.+.++.+
T Consensus       264 ~~t--~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~  340 (406)
T 3cai_A          264 IGV--HQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLP-LVMLIGRPEAQIPVVSF  340 (406)
T ss_dssp             CSC--CCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-TEEECCCCSSBCSEEEE
T ss_pred             CCC--ccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEcCCccccCCEEEE
Confidence            111  23 22   2233332 1                1333 5566677777777776531 11111111123446777


Q ss_pred             EeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC-----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         134 DLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG-----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       134 ef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G-----------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.. .      +   ...+.+.|.++||++.+..           ...+.+|+.++...   +++|++++++++
T Consensus       341 ~~~~-~------~---~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~---t~e~i~~~~~~l  402 (406)
T 3cai_A          341 AVHK-V------P---ADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYS---TMAEVDQLVRAL  402 (406)
T ss_dssp             EETT-B------C---HHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTC---CHHHHHHHHHHH
T ss_pred             EECC-c------C---HHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCC---CHHHHHHHHHHH
Confidence            7631 1      1   3457788889999998642           12478999998766   589999999875

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=98.30  E-value=4.1e-06  Score=77.43  Aligned_cols=166  Identities=10%  Similarity=-0.035  Sum_probs=98.3

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHh---------hhhhhhccCCCC
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFEN---------FIKIKYQILKTP   73 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~---------~~~~~~~~~~~~   73 (329)
                      |+++|.||+++ +|...  +..+.+  .+|     ++|.++|+. .+|++++++++.+.         +....... ...
T Consensus       153 ~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  225 (352)
T 1iug_A          153 EGLVGADMVTS-LLVGE--VALEAM--GVDAAASGSQKGLMCPP-GLGFVALSPRALERLKPRGYYLDLARELKAQ-KEG  225 (352)
T ss_dssp             TCEEEEECTTT-BTTBC--CCSGGG--TCSEEEEESSSTTCCCS-CEEEEEECHHHHHTCCCCSSTTCHHHHHHHH-TTT
T ss_pred             CCEEEEECCcc-ccCcc--eecccc--CeeEEEecCcccccCCC-ceeEEEECHHHHHHhhCCCceeeHHHHHhhc-ccC
Confidence            99999999986 44321  122222  367     359888763 68999999987654         11000000 001


Q ss_pred             ccchhhhcc-HH---HHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          74 AHKLKISDT-VR---PHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        74 ~hg~T~agn-lA---~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      ..  +++.+ .+   +.++++.  +.+++ .++.+++.+++.+.|+++  ....+... ..|.++.+.+....      +
T Consensus       226 ~~--~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~-~~~~~~~~~~~~~~------~  294 (352)
T 1iug_A          226 ES--AWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG--GLRPVPKR-FSPAVAAFYLPEGV------P  294 (352)
T ss_dssp             CC--SSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT--TCEESCSS-BCTTCEEEECCTTC------C
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCcccccc-cCCeEEEEEcCCCC------C
Confidence            11  11223 22   2333332  12333 667788888888888774  22221111 25778888774211      1


Q ss_pred             hHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+.+.|.++||++.+...  ..+.+|+.++...   +++|++++++++
T Consensus       295 ---~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  341 (352)
T 1iug_A          295 ---YARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAY---DRYEALGVAGMF  341 (352)
T ss_dssp             ---HHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSC---CHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccC---CHHHHHHHHHHH
Confidence               34588888999999987421  3578999988755   589999999985

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=98.29  E-value=7.8e-06  Score=76.99  Aligned_cols=172  Identities=12%  Similarity=0.008  Sum_probs=99.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA-----   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~-----   74 (329)
                      ..+|+++|+||+++ +|..  .+....+  .+|     ++|.++|+. ++|++++++++++.+...... ..++.     
T Consensus       171 ~~~~~~li~D~a~~-~~~~--~~~~~~~--~~d~~~~s~sK~l~g~~-G~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  243 (393)
T 2huf_A          171 HQHNCLLIVDTVAS-LGGA--PMFMDRW--EIDAMYTGSQKVLGAPP-GITPVSFSHRAVERYKRRNTK-VKVYYWDMSL  243 (393)
T ss_dssp             HHTTCEEEEECTTT-BTTB--CCCTTTT--TCSEEECCSSSTTCCCS-SCEEEEECHHHHHHHHTCSSC-CSCGGGCHHH
T ss_pred             HHcCCEEEEEcccc-cCCC--Ccchhhc--CccEEEECCCcccccCC-CeEEEEECHHHHHHHhhcCCC-CceEEEchHH
Confidence            35799999999975 5433  1122222  367     359988763 779999999998876531000 00110     


Q ss_pred             ----------cchhhhc-cH-HHH---HHHHh--h-HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEE
Q psy7882          75 ----------HKLKISD-TV-RPH---VQIKK--S-VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVD  134 (329)
Q Consensus        75 ----------hg~T~ag-nl-A~a---aala~--~-ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIe  134 (329)
                                +..+++. +. +++   ++++.  + -+++ .++.+++.+++.+.|+++  ......... ..+.++.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~  321 (393)
T 2huf_A          244 VGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA--GFELYADPKDRLSTVTTIK  321 (393)
T ss_dssp             HHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSCGGGBCTTEEEEE
T ss_pred             HHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCccccCCcEEEEE
Confidence                      1122222 22 222   23322  1 1223 567788888888888775  333222110 124577777


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHC-CceeeccCC--CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGGL--SGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G~--~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      +...      .+   ...+.+.|.++ ||++.+...  ..+.+|+.+ ++.+   +++|++++++++
T Consensus       322 ~~~~------~~---~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~---~~e~i~~~~~~l  376 (393)
T 2huf_A          322 VPQG------VD---WLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNA---TTERVDRVLQVF  376 (393)
T ss_dssp             CCTT------CC---HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             cCCC------CC---HHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcC---CHHHHHHHHHHH
Confidence            6321      01   34577888765 999986421  357999999 7765   478999999985

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=98.29  E-value=1.5e-06  Score=84.48  Aligned_cols=116  Identities=13%  Similarity=-0.041  Sum_probs=70.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccce--ee-echhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLI--VH-TSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigA--v~-~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..||+++|+||+++.    |.++....+|+.+.   +.|.++|+..++++  ++ .++++++.+..        ..+..+
T Consensus       179 ~~~g~~livDe~~~~----~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~--------~~~~~g  246 (400)
T 3nmy_A          179 RKHGLLTVVDNTFAS----PMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF--------LQNSIG  246 (400)
T ss_dssp             HHTTCEEEEECTTTH----HHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH--------HHHHHC
T ss_pred             HHcCCEEEEECCCcc----cccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH--------HHHhcC
Confidence            467999999999862    22222233455444   56999987657755  43 46677766543        222333


Q ss_pred             hhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------------EeeceeeEEEee
Q psy7882          79 ISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------------RGKGLMIGVDLV  136 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------------RG~GLm~gIef~  136 (329)
                      ...+ +++..++.. +.++. +++..+....+.+.|    +++|.+..|                  ||.|.|++|++.
T Consensus       247 ~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L----~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~  321 (400)
T 3nmy_A          247 GVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWL----ETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLK  321 (400)
T ss_dssp             CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH----TTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred             CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH----HcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeC
Confidence            3444 556555554 43432 444444444444444    457777777                  899999999995

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=98.29  E-value=2e-06  Score=82.31  Aligned_cols=172  Identities=10%  Similarity=-0.018  Sum_probs=99.8

Q ss_pred             ccccceEEehhHhhchh-ccchhhhhcccCCcch-----H--HHhhcC-Cccccceeeec-hhHHHhhhhh-hhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSG-DNGTYLGFQCLQICRF-----V--QKDFKG-SFWDKLIVHTS-TCTFENFIKI-KYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfG-RTG~~fA~e~~GV~PD-----i--~KaLgG-G~~PigAv~~~-~eI~d~~~~~-~~~~~~~~   73 (329)
                      ..+|+++|+||+++.+. ..|.     .++..+|     +  +|.+++ |  +.|+++++ +++++.+... ..+....+
T Consensus       175 ~~~~~~li~Dea~~~g~~~~~~-----~~~~~~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~  247 (399)
T 2oga_A          175 DRHGLHIVEDAAQAHGARYRGR-----RIGAGSSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKY  247 (399)
T ss_dssp             HHHTCEECEECTTCTTCEETTE-----ETTCTTCEEEEECCTTSSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTT
T ss_pred             HHcCCEEEEECcccccCccCCe-----ecccccCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccc
Confidence            35799999999997331 2222     2344468     2  499987 6  67888876 7887766431 01100001


Q ss_pred             c---cchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCCC
Q psy7882          74 A---HKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        74 ~---hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~~  146 (329)
                      .   .+.++..+ ++++++.+. +.+++ .++.+++.+++.+.|+++. .......- .+.++++.+.+...        
T Consensus       248 ~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~--------  318 (399)
T 2oga_A          248 SHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLP-GIGLPVTAPDTDPVWHLFTVRTE--------  318 (399)
T ss_dssp             CCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCT-TCBCCCCCTTEECCCSSEEEECS--------
T ss_pred             cccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CccccCCCCCCcceeEEEEEECC--------
Confidence            1   13344556 666666555 54444 5667777777777766531 11111100 23344433444211        


Q ss_pred             hHHHHHHHHHHHHCCceeeccCCC-------------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGLS-------------------------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~~-------------------------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        -...+.+.|.++||++.+....                         .+++|+.++...   |++|++++++++
T Consensus       319 --~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~---t~edi~~~~~~l  389 (399)
T 2oga_A          319 --RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHL---ERPQALRVIDAV  389 (399)
T ss_dssp             --SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTC---CHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCC---CHHHHHHHHHHH
Confidence              1345888889999998763210                         157999887766   589999999985

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=98.27  E-value=2.2e-07  Score=88.01  Aligned_cols=163  Identities=10%  Similarity=-0.016  Sum_probs=88.5

Q ss_pred             cccceEEehhHhhchhccc--hhhhhcccCCcch-------HHHhhc-CCccccceeee---chhHHHhhhhhhhccCCC
Q psy7882           6 YRDCGVVVSAVDFGSGDNG--TYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQILKT   72 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG--~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~~~~   72 (329)
                      .||+++|.||++++|++.|  ..++...+...+|       ++|+++ .|+ ++|.+++   ++++++.+...-.     
T Consensus       203 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~-----  276 (396)
T 2q7w_A          203 EKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAADSETVDRAFSQMK-----  276 (396)
T ss_dssp             HHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHH-----
T ss_pred             HCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCCHHHHHHHHHHHH-----
Confidence            5799999999999998765  4444544433344       469998 784 9999986   5644333321000     


Q ss_pred             Cccchhhhc-c-HHHHHHHHh-h----------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882          73 PAHKLKISD-T-VRPHVQIKK-S----------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD  138 (329)
Q Consensus        73 ~~hg~T~ag-n-lA~aaala~-~----------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d  138 (329)
                      ..+..++++ + ++++++.+. +          .+++ .+++++..+++.+.|+++....+.......-|++..+.+.  
T Consensus       277 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--  354 (396)
T 2q7w_A          277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT--  354 (396)
T ss_dssp             HHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC--
T ss_pred             HHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC--
Confidence            011223332 4 444444332 1          1122 3445566666666665541000011111123444433321  


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                              .   ..+...+.++||++.++      +|+.++.+    +++|++++++++
T Consensus       355 --------~---~~~~~~l~~~gv~v~~~------~Ris~~~~----~~e~i~~~~~~l  392 (396)
T 2q7w_A          355 --------K---EQVLRLREEFGVYAVAS------GRVNVAGM----TPDNMAPLCEAI  392 (396)
T ss_dssp             --------H---HHHHHHHHHHCEECCTT------CEEEGGGC----CTTTHHHHHHHH
T ss_pred             --------H---HHHHHHHHhcCeeecCC------ceEEEeec----CHHHHHHHHHHH
Confidence                    1   23556677899999762      58887743    467899988874

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=98.26  E-value=3.1e-06  Score=79.89  Aligned_cols=176  Identities=11%  Similarity=0.035  Sum_probs=101.3

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch-----HH--HhhcCCccccceeeec-hhHHHhhhhhhhccC-----
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTS-TCTFENFIKIKYQIL-----   70 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~-----   70 (329)
                      ..+|+++|.||+++ |+...|.     .++. +|     +.  |.++||  ..|.++++ +++.+.+........     
T Consensus       151 ~~~~~~li~D~a~~~g~~~~~~-----~~~~-~d~~~~S~~k~K~l~~~--~~g~~~~~~~~~~~~l~~~~~~~~~~~~~  222 (393)
T 1mdo_A          151 ERYGIPVIEDAAHATGTSYKGR-----HIGA-RGTAIFSFHAIKNITCA--EGGIVVTDNPQFADKLRSLKFHGLGVDAW  222 (393)
T ss_dssp             HHHTCCBCEECTTCTTCEETTE-----ETTS-SSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTEECC--
T ss_pred             HHcCCeEEEECccccCCeECCe-----ecCC-CCeEEEeCCCCCccccc--cceEEEeCCHHHHHHHHHHHhcCCcccch
Confidence            35799999999998 5544443     2333 78     23  999886  36778776 778776653100000     


Q ss_pred             -------CCCc----cchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeEEE
Q psy7882          71 -------KTPA----HKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIGVD  134 (329)
Q Consensus        71 -------~~~~----hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~gIe  134 (329)
                             ....    .|..+..+ ++++.++.. +.+++ +++.+++.++|.+.|+++--+.....  +.++.+.++.+.
T Consensus       223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~  302 (393)
T 1mdo_A          223 DRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIR  302 (393)
T ss_dssp             ---------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEE
T ss_pred             hhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEE
Confidence                   0000    11112334 665555544 43444 66677777778777765410000011  245566778888


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCC-----------------------CCEEEEeCccccCcCCHHHHH
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLS-----------------------GNTLTALQPKLLNYWTDFVGT  191 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~-----------------------~nvIrl~PPL~It~~t~eeId  191 (329)
                      +..+..   ..   ....+.+.|.++||++.+....                       .+.+|+.+...+   |++|++
T Consensus       303 ~~~~~~---~~---~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~---t~~~i~  373 (393)
T 1mdo_A          303 VDEARC---GI---TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDM---TESDFD  373 (393)
T ss_dssp             CCHHHH---SS---CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTC---CHHHHH
T ss_pred             eccccc---cc---CHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCC---CHHHHH
Confidence            742000   00   1356888899999988763210                       236888665444   689999


Q ss_pred             HHHhcc
Q psy7882         192 PCLDCE  197 (329)
Q Consensus       192 ~~l~~~  197 (329)
                      .+++++
T Consensus       374 ~~~~~l  379 (393)
T 1mdo_A          374 RVITAL  379 (393)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999985

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=98.25  E-value=8.8e-06  Score=78.56  Aligned_cols=161  Identities=12%  Similarity=-0.066  Sum_probs=91.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeech-h---------------------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTST-C---------------------   57 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~-e---------------------   57 (329)
                      .+||+++|+||++++++...     ......+|     ++|.++|...++|++++.+ +                     
T Consensus       167 ~~~~~~li~D~~~~~~~~~~-----~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  241 (412)
T 2cb1_A          167 EEAGVALVVDNTFGAAGALC-----RPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE  241 (412)
T ss_dssp             HHHTCEEEEECGGGTTTTSC-----CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred             HHcCCEEEEECCCccccccC-----CccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence            35799999999999774221     22234577     4699987555788777655 2                     


Q ss_pred             ------HHHhhhhhhhccCCCCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE----
Q psy7882          58 ------TFENFIKIKYQILKTPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV----  124 (329)
Q Consensus        58 ------I~d~~~~~~~~~~~~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V----  124 (329)
                            +++.+..   .    ..+..++..+ .+++.++.. +.++. +++..++.++|.+.|.+    ++.+..|    
T Consensus       242 ~~~~~~~~~~~r~---~----~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~----~~~v~~v~~p~  310 (412)
T 2cb1_A          242 ALRARCFPERVRT---L----GLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQG----HPKVKALRYPG  310 (412)
T ss_dssp             HHGGGHHHHHHHH---H----HTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHT----CTTCSEEECTT
T ss_pred             ccchHHHHHHHHH---H----HHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHc----CCCeeEEECCC
Confidence                  2222211   0    0011112223 445444444 44433 55566777777776654    4444444    


Q ss_pred             --------------EeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---------------------
Q psy7882         125 --------------RGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---------------------  169 (329)
Q Consensus       125 --------------RG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---------------------  169 (329)
                                    +|.|.++.|++ .+           ...+.+.+.+.|+++ ....                     
T Consensus       311 ~~~~p~~~~~~~~~~~~~~iv~~~~-~~-----------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~  377 (412)
T 2cb1_A          311 LPEDPAHRNARKYLASGGPILTLDL-GD-----------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEE  377 (412)
T ss_dssp             STTCTTHHHHHHHCSSSCSEEEEEC-SS-----------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHH
T ss_pred             CCCCccHHHHHHhCCCCceEEEEEe-CC-----------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHH
Confidence                          46788999998 32           123455555678886 3210                     


Q ss_pred             -------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         170 -------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       170 -------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                             ....||+...+-   +++++|+.+++++
T Consensus       378 ~~~~~g~~~~~iR~s~g~~---~~~~~i~~l~~al  409 (412)
T 2cb1_A          378 ARLQAGVTPGLVRVSVGLE---DPLDLLALFEEAL  409 (412)
T ss_dssp             HHHHTTCCTTEEEEECCSS---CHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCeEEEEeccC---CHHHHHHHHHHHH
Confidence                   035666665433   3678888888764

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=98.23  E-value=6.3e-06  Score=80.51  Aligned_cols=169  Identities=8%  Similarity=0.006  Sum_probs=99.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccc---
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK---   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg---   76 (329)
                      ..||+++|+|++++. |-..  +....++  .|     ..|.+.||..++|++.+++++.+.+.+...+   ...|.   
T Consensus       241 ~~~g~~vi~D~a~~~-g~~~--~~~~~~~--~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g---~~~~~~~~  312 (465)
T 3e9k_A          241 QAKGCYVGFDLAHAV-GNVE--LYLHDWG--VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVG---WFGHELST  312 (465)
T ss_dssp             HHTTCEEEEECTTTT-TTSC--CCHHHHT--CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCC---GGGBCHHH
T ss_pred             HHcCCEEEEEhhhhc-CCcC--CchhhcC--CCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccC---ccCCCCCc
Confidence            467999999999873 2221  1122223  45     2499976644678999999887654320000   00010   


Q ss_pred             -------hh-------h---hcc-HHHHHHHHh-hHH-----hH-HHHHHHHHHHHHHHHHHHHHhC------Cce----
Q psy7882          77 -------LK-------I---SDT-VRPHVQIKK-SVL-----ER-FVHTYVVGNFLLTHLSKLREEF------AIV----  121 (329)
Q Consensus        77 -------~T-------~---agn-lA~aaala~-~il-----e~-le~v~~lG~~L~~gL~eL~~~~------p~v----  121 (329)
                             .+       |   +.+ +++++..+. +.+     ++ .++..++.+++.+.|+++...+      +.+    
T Consensus       313 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~  392 (465)
T 3e9k_A          313 RFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIIT  392 (465)
T ss_dssp             HTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECS
T ss_pred             ccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeC
Confidence                   00       0   223 333333333 333     33 5667777777877777653111      111    


Q ss_pred             -eeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         122 -GDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       122 -~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                       .+.++.|.++.+.+..+           ...+.+.|.++||++...  .++++|+.| |+..   +++||+++++++
T Consensus       393 p~~~~~~g~~~~~~~~~~-----------~~~l~~~L~~~Gi~v~~~--~~~~iRis~~~~~~---t~edi~~~~~~l  454 (465)
T 3e9k_A          393 PSHVEERGCQLTITFSVP-----------NKDVFQELEKRGVVCDKR--NPNGIRVAPVPLYN---SFHDVYKFTNLL  454 (465)
T ss_dssp             CSSGGGBCSCEEEEECCT-----------TCCHHHHHHTTTEECEEE--TTTEEEEBCCTTTC---CHHHHHHHHHHH
T ss_pred             CCCHhhcccEEEEEecCC-----------HHHHHHHHHHCCEEEecC--CCCEEEEeCcccCC---CHHHHHHHHHHH
Confidence             12344688888887521           123778899999998753  368999999 8877   589999999985

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=98.22  E-value=1.5e-05  Score=75.09  Aligned_cols=171  Identities=13%  Similarity=-0.040  Sum_probs=98.3

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc------
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA------   74 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~------   74 (329)
                      .+|+++|+||++. +|...  +..+.+  .+|     ..|.++++ .++|++++++++++.+.....+. ..+.      
T Consensus       171 ~~~~~li~Dea~~-~g~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  243 (396)
T 2ch1_A          171 QHDCLLIVDAVAS-LCGVP--FYMDKW--EIDAVYTGAQKVLGAP-PGITPISISPKALDVIRNRRTKS-KVFYWDLLLL  243 (396)
T ss_dssp             HTTCEEEEECTTT-BTTBC--CCTTTT--TCCEEECCCC-CCCCC-SSCEEEEECHHHHHHHHTCSSCC-SCGGGCHHHH
T ss_pred             HcCCEEEEEcccc-ccCCc--cchhhc--CcCEEEEcCCccccCC-CCeEEEEECHHHHHhhhhccCcc-cceEechHHH
Confidence            5799999999987 65431  222222  357     23999887 37899999998887654200000 0000      


Q ss_pred             ---------cchh-hhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE--eeceeeEEE
Q psy7882          75 ---------HKLK-ISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR--GKGLMIGVD  134 (329)
Q Consensus        75 ---------hg~T-~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR--G~GLm~gIe  134 (329)
                               ...+ ++.+ .+++++.+. +.     +++ .++.+++.+++.+.|+++  ....+....  ..|.++.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~  321 (396)
T 2ch1_A          244 GNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM--GLDIFVKDPRHRLPTVTGIM  321 (396)
T ss_dssp             HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCBSSCSGGGBCTTEEEEE
T ss_pred             HHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC--CCeeccCCccccCCceEEEE
Confidence                     0111 1223 333332222 22     222 567778888888888876  333222111  234567777


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      +..+.      +   ...+.+.|.++ ||++.++.  ..++.+|+.+ +++.   +++|++++++++
T Consensus       322 ~~~~~------~---~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~---~~e~i~~~~~~l  376 (396)
T 2ch1_A          322 IPKGV------D---WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECS---TVQKIQFYLYGF  376 (396)
T ss_dssp             CCTTC------C---HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             cCCCC------C---HHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcC---CHHHHHHHHHHH
Confidence            63210      1   34577888875 99998632  1357899998 6766   578999999985

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=98.22  E-value=1.6e-05  Score=75.20  Aligned_cols=174  Identities=13%  Similarity=0.004  Sum_probs=100.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhh-------------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIK-------------   66 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~-------------   66 (329)
                      ..||+++|+||+++ +|..  .+..+.++  +|     ..|.+.|+. ++|++++++++++.+....             
T Consensus       163 ~~~~~~li~D~a~~-~~~~--~~~~~~~~--~d~~~~s~~K~l~g~~-g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~  236 (416)
T 3isl_A          163 RTEDALFIVDAVAT-IGGC--EVKVDEWK--IDAAIGGTQKCLSVPS-GMAPITYNERVADVIAARKKVERGIATQADRA  236 (416)
T ss_dssp             HHTTCEEEEECTTT-TTTS--CCCTTTTT--CSEEECCSSSTTCCCS-SEEEEEECHHHHHHHHTC--------------
T ss_pred             HHcCCEEEEECCcc-ccCC--CcchhhcC--CCEEEecCccccCCCC-CeEEEEECHHHHHHhhccccccccccccccch
Confidence            46799999999987 2221  11222233  56     349998875 8999999999987765200             


Q ss_pred             -----hccC--------------CCCccchhhhcc--HHHHHHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCce
Q psy7882          67 -----YQIL--------------KTPAHKLKISDT--VRPHVQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIV  121 (329)
Q Consensus        67 -----~~~~--------------~~~~hg~T~agn--lA~aaala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v  121 (329)
                           ....              ......+|.+..  .++.++++.  +. +++ .++..++.+++.+.|+++  .....
T Consensus       237 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~  314 (416)
T 3isl_A          237 ALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM--GLRLF  314 (416)
T ss_dssp             ----CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBC
T ss_pred             hccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCEec
Confidence                 0000              000011111111  233333333  22 334 677888888888888874  23222


Q ss_pred             ee-EEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         122 GD-VRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       122 ~~-VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .. -...|.++.+.+..+.      +   ...+.+.|.++ ||++.+..  ..++.+|+.++...+  ++++++++++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~------~---~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~--~~e~i~~~~~~l  383 (416)
T 3isl_A          315 GDDSCKMPVVTCVEIPGGI------D---GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSC--RKENVLFVLAGL  383 (416)
T ss_dssp             SCGGGBCTTEEEEECCTTC------C---HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGC--SHHHHHHHHHHH
T ss_pred             cCccccCCcEEEEeCCCCC------C---HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCC--cHHHHHHHHHHH
Confidence            11 1223667777774211      1   34688888887 99998632  246799999855543  345599999985

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=98.20  E-value=9.7e-07  Score=81.72  Aligned_cols=161  Identities=6%  Similarity=-0.036  Sum_probs=92.5

Q ss_pred             ccccceEEehhHhhch--hccchhhhhcccC--CcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGS--GDNGTYLGFQCLQ--ICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGf--GRTG~~fA~e~~G--V~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      .+||+++|+||+++||  |+++..  ....+  ..+|+     .|.  ||...+|++++++++++.+..  ..    ..+
T Consensus       174 ~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~~K~--g~~~~~g~l~~~~~~~~~~~~--~~----~~~  243 (359)
T 1svv_A          174 KEHGLYLFLDGARLASALSSPVND--LTLADIARLTDMFYIGATKA--GGMFGEALIILNDALKPNARH--LI----KQR  243 (359)
T ss_dssp             HHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHCSEEEEECTTT--TCSSCEEEEECSGGGCTTHHH--HH----HHT
T ss_pred             HHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcCCEEEEecccC--CCCCceEEEEEcccHHHHHHH--HH----hcC
Confidence            3579999999999877  454421  12212  24661     374  443456888889888776643  00    012


Q ss_pred             chhhhcc----HHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeece-eeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT----VRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGL-MIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn----lA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GL-m~gIef~~d~~~~~p~~~~~  149 (329)
                      +.+++.+    .+++++++.+.+++ .++.+++.++|.+.| +. .....+.   ..|. ++.+.+.             
T Consensus       244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~-~~~~~~~---~~~~~~~~~~~~-------------  305 (359)
T 1svv_A          244 GALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EA-CGIRLAW---PSASNQLFPILE-------------  305 (359)
T ss_dssp             TCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HH-TTCCBSS---CCSSSEECBEEE-------------
T ss_pred             CcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-cc-CCeEEcc---CCccceEEEEcC-------------
Confidence            2222212    22222233322333 667888888888888 43 2222221   1222 2222221             


Q ss_pred             HHHHHHHHHHC-CceeeccC-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEH-GLLLGRGG-LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~-GVLl~~~G-~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..+.+.|.++ ||++.... ...+.+|+.|++..   +++|++++++++
T Consensus       306 -~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  351 (359)
T 1svv_A          306 -NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWAT---EEKECHRFVEVL  351 (359)
T ss_dssp             -HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHhcCEEEEecccCCCceEEEEccCcC---CHHHHHHHHHHH
Confidence             2477888888 99985421 13568999988876   589999999975

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=98.15  E-value=2.3e-05  Score=73.73  Aligned_cols=173  Identities=9%  Similarity=0.026  Sum_probs=99.6

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhh-c--c-C-----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKY-Q--I-L-----   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~-~--~-~-----   70 (329)
                      ..+|+++|.||+++ +|...  +..+.+  .+|     ++|.++|+. ++|++++++++++.+..... .  . .     
T Consensus       161 ~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~~~~s~sK~~~~~~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~  234 (392)
T 2z9v_A          161 SAHGAYLIVDAVSS-FGGMK--THPEDC--KADIYVTGPNKCLGAPP-GLTMMGVSERAWAKMKANPLAPRASMLSIVDW  234 (392)
T ss_dssp             HHTTCEEEEECTTT-BTTBS--CCGGGG--TCSEEEECSSSTTCCCS-CCEEEEECHHHHHHHHTCTTSCCSSTTCSGGG
T ss_pred             HHcCCeEEEEcccc-cCCcc--cccccc--cceEEEecCcccccCCC-ceeEEEECHHHHHHhhhccCCCCceeccHHHH
Confidence            35799999999997 33321  122222  367     359998863 77999999998876642000 0  0 0     


Q ss_pred             -CCC-ccch-hhhcc-HHHH---HHHHh--hH-HhH-HHHHHHHHHHHHHHHHHHHHhCCcee-e-EEeeceeeEEEeec
Q psy7882          71 -KTP-AHKL-KISDT-VRPH---VQIKK--SV-LER-FVHTYVVGNFLLTHLSKLREEFAIVG-D-VRGKGLMIGVDLVQ  137 (329)
Q Consensus        71 -~~~-~hg~-T~agn-lA~a---aala~--~i-le~-le~v~~lG~~L~~gL~eL~~~~p~v~-~-VRG~GLm~gIef~~  137 (329)
                       ... .... +.+.+ .+++   ++++.  +. +++ .++.+++.+++.+.|+++  ...... . ....|.++.+.+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~  312 (392)
T 2z9v_A          235 ENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM--GLSVWAASDSIASPTTTAVRTPD  312 (392)
T ss_dssp             TTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCBSSSSGGGBCTTEEEEECCT
T ss_pred             HhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc--CCeeccCCccccCCceEEEECCC
Confidence             000 0001 11223 3322   23332  11 333 667788888888888775  232221 1 01246677777632


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHC-CceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         138 DKETKVPLNSRHMTHILDSCKEH-GLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       138 d~~~~~p~~~~~~~~~~~~l~e~-GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      +.      +   ...+.+.|.++ ||++.+..  ...+.+|+.| ++..   +++|++++++++
T Consensus       313 ~~------~---~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~---~~~~i~~~~~~l  364 (392)
T 2z9v_A          313 GV------D---EKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTA---QPIYAIAALTAL  364 (392)
T ss_dssp             TC------C---HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             CC------C---HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCccccc---CHHHHHHHHHHH
Confidence            11      1   34578888887 99998742  1367899986 4344   589999999975

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=98.13  E-value=1e-05  Score=78.66  Aligned_cols=46  Identities=11%  Similarity=-0.223  Sum_probs=34.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeec
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTS   55 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~   55 (329)
                      ..+|+++|+||+|+++|..+..+     +..+|     +.|.++|...++|+++++
T Consensus       171 ~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~~~G~~~~~  221 (421)
T 2ctz_A          171 REKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGAVIAGAIVD  221 (421)
T ss_dssp             HHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             HHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCCcEEEEEEe
Confidence            35799999999998888765443     34588     459999844588877764

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=98.13  E-value=6.8e-06  Score=79.78  Aligned_cols=173  Identities=12%  Similarity=-0.006  Sum_probs=93.2

Q ss_pred             ccccceEEehhHhhchhccchhhhh----cccCCc-----------ch-----HHHhhcCCccccceeee-c-h-hHHHh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF----QCLQIC-----------RF-----VQKDFKGSFWDKLIVHT-S-T-CTFEN   61 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~----e~~GV~-----------PD-----i~KaLgGG~~PigAv~~-~-~-eI~d~   61 (329)
                      .+||++||.||++..-|   .+|..    .+.|+.           +|     ++|++  | +|+|++++ + + ++++.
T Consensus       214 ~~~gi~li~De~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~--g-~~~Gg~~~~~d~~~l~~~  287 (467)
T 1ax4_A          214 KQHGIFVVMDSARFCEN---AYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP--L-LNIGGLVAIRDNEEIFTL  287 (467)
T ss_dssp             HHHTCCEEEECTTHHHH---HHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT--C-CSSCEEEEESSCHHHHHH
T ss_pred             HHcCCEEEEEchhhhhc---chhccccccccCCCchhhhhhhhccccceEEEeccccC--C-CCcceEEEeCCHHHHHHH
Confidence            46899999999876311   11111    223332           34     34765  4 38876554 5 5 78876


Q ss_pred             hhhhhhccCCCCccchhhhcc-HHHHH----HHHhhHHh--HHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEE
Q psy7882          62 FIKIKYQILKTPAHKLKISDT-VRPHV----QIKKSVLE--RFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVD  134 (329)
Q Consensus        62 ~~~~~~~~~~~~~hg~T~agn-lA~aa----ala~~ile--~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIe  134 (329)
                      +......    ..+..+++++ .++.+    +++. ..+  .+++..+.+++|.+.|++  ..++.+...+|.++++.+.
T Consensus       288 ~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~--~~~~~~~~~~~~~~~~~~~  360 (467)
T 1ax4_A          288 ARQRCVP----MEGFVTYGGLAGRDMAAMVQGLEE-GTEEEYLHYRIGQVKYLGDRLRE--AGIPIQYPTGGHAVFVDCK  360 (467)
T ss_dssp             HHHHHHH----HTCSTTTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHH--TTCCBCSSCCSSEEEEEST
T ss_pred             HHhhccc----cccccccCCccchHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHHh--CCCCcccCCCceEEEEehh
Confidence            6431010    1112344444 33333    3332 112  144556777888888877  2344444455554443310


Q ss_pred             -eecCCCCCCCCChHHHHHHHHHH-HHCCceeeccCC---------------CCCEEEEeCc-cccCcCCHHHHHHHHhc
Q psy7882         135 -LVQDKETKVPLNSRHMTHILDSC-KEHGLLLGRGGL---------------SGNTLTALQP-KLLNYWTDFVGTPCLDC  196 (329)
Q Consensus       135 -f~~d~~~~~p~~~~~~~~~~~~l-~e~GVLl~~~G~---------------~~nvIrl~PP-L~It~~t~eeId~~l~~  196 (329)
                       +...-. ...+   -...+...| .++||.+.++|.               ..+.+||.|| +++   |++|+++++++
T Consensus       361 ~~~~~~~-~~~~---~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~---t~e~i~~~~~~  433 (467)
T 1ax4_A          361 KLVPQIP-GDQF---PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVY---TNDHMDYIADA  433 (467)
T ss_dssp             TTCTTSC-GGGC---HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSS---CHHHHHHHHHH
T ss_pred             hhccccc-cCCC---CHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccC---CHHHHHHHHHH
Confidence             000000 0001   245678888 889999987321               1279999999 434   68999999998


Q ss_pred             c
Q psy7882         197 E  197 (329)
Q Consensus       197 ~  197 (329)
                      +
T Consensus       434 l  434 (467)
T 1ax4_A          434 L  434 (467)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=98.10  E-value=2e-05  Score=75.55  Aligned_cols=136  Identities=13%  Similarity=-0.027  Sum_probs=74.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeech-hHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTST-CTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~-eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|+++|+||+++++.. +.     ..+..+|     +.|.++|+..++ |++++++ ++++.+..  ..    ..++.
T Consensus       171 ~~~~~~livD~~~~~~~~-~~-----~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~--~~----~~~g~  238 (389)
T 3acz_A          171 HERGARLVVDATFTSPCF-LK-----PLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKF--YR----KDAGS  238 (389)
T ss_dssp             HHHTCEEEEECTTTCTTT-CC-----GGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH--HH----HHHCC
T ss_pred             HHcCCEEEEECCCccccc-cC-----ccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHH--HH----HhcCC
Confidence            357999999999986521 22     2234578     459999876687 8999998 88877653  10    01222


Q ss_pred             hhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHH----------HhCCce----eeEEeeceeeEEEeecCCC
Q psy7882          78 KISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLR----------EEFAIV----GDVRGKGLMIGVDLVQDKE  140 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~----------~~~p~v----~~VRG~GLm~gIef~~d~~  140 (329)
                      +  .+ .++.++++. +.+.. +++..+....+.+.|++..          ..+|.+    ...+|.|.|+++++..   
T Consensus       239 ~--~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---  313 (389)
T 3acz_A          239 L--MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---  313 (389)
T ss_dssp             C--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---
T ss_pred             C--CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---
Confidence            2  23 444444444 33321 3334444444444444320          011110    0125778899999842   


Q ss_pred             CCCCCChHHHHHHHHHHHHCCceeec
Q psy7882         141 TKVPLNSRHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e~GVLl~~  166 (329)
                               ...+.+.+.+.|++...
T Consensus       314 ---------~~~~~~~l~~~~i~~~~  330 (389)
T 3acz_A          314 ---------FEAAKKLMEHLKVCTLA  330 (389)
T ss_dssp             ---------HHHHHHHHTTCSSSEEB
T ss_pred             ---------HHHHHHHHHhCCCcEEC
Confidence                     12244555567877755

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=98.06  E-value=1.4e-05  Score=78.10  Aligned_cols=155  Identities=14%  Similarity=0.056  Sum_probs=85.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcC-CccccceeeechhHHH-hhhhhhhccCCCCccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKG-SFWDKLIVHTSTCTFE-NFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgG-G~~PigAv~~~~eI~d-~~~~~~~~~~~~~~hg~T~   79 (329)
                      ..+|+++|+||+++    +|.++....+|+...   ++|.++| |.++.|+++++++.+. .+..  ..    ..++.++
T Consensus       193 ~~~g~~livDe~~~----~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~--~~----~~~g~~~  262 (414)
T 3ndn_A          193 HAAGAKVVLDNVFA----TPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK--LM----RHTGPAM  262 (414)
T ss_dssp             HHTTCEEEEECTTT----HHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHH--HH----HHHCCCC
T ss_pred             HHcCCEEEEECCCc----ccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHH--HH----HHcCCCC
Confidence            35799999999987    333333345566444   5699988 5457899999988765 3331  00    1122222


Q ss_pred             hccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE------------------EeeceeeEEEeecCC
Q psy7882          80 SDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV------------------RGKGLMIGVDLVQDK  139 (329)
Q Consensus        80 agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V------------------RG~GLm~gIef~~d~  139 (329)
                      + ..++..++.. +.++. +++..+..+++.+.|+    ++|.+..|                  ||.|.|++|++..+.
T Consensus       263 ~-~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~----~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~  337 (414)
T 3ndn_A          263 S-AFNAWVLLKGLETLAIRVQHSNASAQRIAEFLN----GHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPE  337 (414)
T ss_dssp             C-HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH----TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCG
T ss_pred             C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCc
Confidence            1 1444444444 33332 4445555555555554    34544443                  778999999995310


Q ss_pred             CCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCcc
Q psy7882         140 ETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPK  180 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL  180 (329)
                      .    .+.+...+++..|...++.+...+  ..++...|+.
T Consensus       338 ~----~~~~~~~~~~~~l~~~~~~~s~G~--~~sl~~~p~~  372 (414)
T 3ndn_A          338 D----VAKQRAFEVLDKMRLIDISNNLGD--AKSLVTHPAT  372 (414)
T ss_dssp             G----GHHHHHHHHHHHCSSSEECSCCSC--SSCEEECGGG
T ss_pred             c----ccHHHHHHHHHhCccceEcCCCCC--CCceeeCccc
Confidence            0    001345667777766665554432  2344444443

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=98.06  E-value=1.9e-05  Score=76.43  Aligned_cols=175  Identities=13%  Similarity=0.005  Sum_probs=97.8

Q ss_pred             ccccceEEehhHhhc----------hhccchhhh--hcccCCcch---H-HHhhcCCccc-cceeee-chhHHHhhhhhh
Q psy7882           5 YYRDCGVVVSAVDFG----------SGDNGTYLG--FQCLQICRF---V-QKDFKGSFWD-KLIVHT-STCTFENFIKIK   66 (329)
Q Consensus         5 ~~~giLLI~DEVqTG----------fGRTG~~fA--~e~~GV~PD---i-~KaLgGG~~P-igAv~~-~~eI~d~~~~~~   66 (329)
                      ..||+++|.||++++          +.+.|..+.  .+..+..+|   + +|.+++  .| .|.+++ ++++++.+....
T Consensus       205 ~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~--~~~gG~~~~~~~~~~~~~~~~~  282 (456)
T 2ez2_A          205 EAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL--VNIGGFLCMNDDEMFSSAKELV  282 (456)
T ss_dssp             HHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC--CSSCEEEEESCHHHHHHHHHHH
T ss_pred             HHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCC--CCceeEEEECCHHHHHHHHHHH
Confidence            457999999999985          345554321  012344478   2 355644  26 466666 578877654300


Q ss_pred             hccCCCCccc-hhhhc-c-HHHHH-HHHh-hHH-hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec--
Q psy7882          67 YQILKTPAHK-LKISD-T-VRPHV-QIKK-SVL-ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ--  137 (329)
Q Consensus        67 ~~~~~~~~hg-~T~ag-n-lA~aa-ala~-~il-e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~--  137 (329)
                      ..     .++ +++.+ + .++++ +++. +.+ ++ .++..++.+++.+.|+++  ..+.+...  .|.++.+.+..  
T Consensus       283 ~~-----~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~p~--~~~~~~~~~~~~~  353 (456)
T 2ez2_A          283 VV-----YEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAA--GVPIVEPV--GGHAVFLDARRFC  353 (456)
T ss_dssp             HH-----HTCCTTTTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT--TCCBCSSC--CSSEEEEEHHHHT
T ss_pred             hh-----ccCcccccCcchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC--CCccccCC--CceEEEEEhHHhc
Confidence            00     011 12222 2 22222 3333 344 23 667788888888888774  33333322  25666666531  


Q ss_pred             CCCCCCCCChHH-HHHHHHHH-HHCCceeeccCC---------------CCCEEEEeCccc-cCcCCHHHHHHHHhcc
Q psy7882         138 DKETKVPLNSRH-MTHILDSC-KEHGLLLGRGGL---------------SGNTLTALQPKL-LNYWTDFVGTPCLDCE  197 (329)
Q Consensus       138 d~~~~~p~~~~~-~~~~~~~l-~e~GVLl~~~G~---------------~~nvIrl~PPL~-It~~t~eeId~~l~~~  197 (329)
                      +...    ..++ ...+...| .++||.+.++|.               ..+.+||.+|+. +   +++|++++++++
T Consensus       354 ~~~~----~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~---t~e~i~~~~~~l  424 (456)
T 2ez2_A          354 EHLT----QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVY---TYAHMDVVADGI  424 (456)
T ss_dssp             TTSC----GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTC---CHHHHHHHHHHH
T ss_pred             CCCC----hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCC---CHHHHHHHHHHH
Confidence            1100    1123 45556777 588998654331               137899999985 3   689999999975

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=98.04  E-value=3.6e-05  Score=72.99  Aligned_cols=165  Identities=11%  Similarity=0.003  Sum_probs=94.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..||+++|.||++..+...|.......+  .||       ++|.++ .| +.+|.+++++++.+.+..        ....
T Consensus       194 ~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~--------~~~~  262 (385)
T 1b5p_A          194 VEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMAS--------VSRQ  262 (385)
T ss_dssp             HHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--------HHHT
T ss_pred             HHcCCEEEEEccchhcccCCCCCCHHHc--CCCCEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHH--------HHhh
Confidence            3579999999999987544422222222  223       469987 56 489999999998887653        1111


Q ss_pred             hhhhcc-HHH---HHHHH----h-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          77 LKISDT-VRP---HVQIK----K-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        77 ~T~agn-lA~---aaala----~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      .+++.+ ++.   .++++    . +.+++ .++.++..+++.+.|+++  ......  ..-|.++-+.+... +    .+
T Consensus       263 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~-~----~~  333 (385)
T 1b5p_A          263 STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL--GLKAVR--PSGAFYVLMDTSPI-A----PD  333 (385)
T ss_dssp             TTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCBCC--CSBTTEEEEECTTT-C----SS
T ss_pred             ccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC--CCeecC--CCeeEEEEEecCCC-C----CC
Confidence            233333 222   23342    1 22333 455666667777777664  222111  11234444454210 0    11


Q ss_pred             hHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ...+...|.++||++.++..  ..+.+|+.-.     .++++|++.++..
T Consensus       334 ---~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~-----~~~~~i~~~l~~l  378 (385)
T 1b5p_A          334 ---EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA-----TSEENLRKALERF  378 (385)
T ss_dssp             ---HHHHHHHHHHTTEECEESGGGTCTTEEEEECC-----SCHHHHHHHHHHG
T ss_pred             ---HHHHHHHHHHCCeEEecccccCCCCeEEEEec-----CCHHHHHHHHHHH
Confidence               34577888899999987421  1468998743     2678999999875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=98.03  E-value=2.9e-05  Score=76.55  Aligned_cols=172  Identities=6%  Similarity=-0.131  Sum_probs=96.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCC----ccccceeeechhHHHhhhhhhhc-cCCCC-
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGS----FWDKLIVHTSTCTFENFIKIKYQ-ILKTP-   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG----~~PigAv~~~~eI~d~~~~~~~~-~~~~~-   73 (329)
                      ..+|+++|+||++..+ .+|.. ....+|  +|     +.|.+++.    ..++|++++++++++.+...... ....+ 
T Consensus       230 ~~~g~~li~Dea~~~~-~~g~~-~~~~~g--~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~  305 (474)
T 1wyu_B          230 KEAGVQLYYDGANLNA-IMGWA-RPGDMG--FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFY  305 (474)
T ss_dssp             HHHTCEEEEEGGGGGG-TTTTC-CHHHHT--CSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEE
T ss_pred             HHcCCEEEEeCchhhh-hccCC-CcccCC--CcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeE
Confidence            3579999999999532 23311 112223  67     35988632    24789999999887655310000 00000 


Q ss_pred             ------cc---chhhhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeecee--eEEE
Q psy7882          74 ------AH---KLKISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLM--IGVD  134 (329)
Q Consensus        74 ------~h---g~T~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm--~gIe  134 (329)
                            .|   ..++.++ ++++++++. ..     +++ .+++.++.++|.+.|+++  .+..+.   +.+.+  +-+.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~~~~~~~~  380 (474)
T 1wyu_B          306 LDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK--GYRVPY---DGPSMHEFVAQ  380 (474)
T ss_dssp             EECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCBCSS---CSSCCSCEEEB
T ss_pred             ecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CcEecC---CCCcceEEEEE
Confidence                  00   1233355 555555544 22     222 566777888888888774  232211   11222  2233


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      + ...        .....+.+.|.++||++.....   ..+.+|+.|+...   +++|+|++++++
T Consensus       381 ~-~~~--------~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~---t~e~id~~~~~L  434 (474)
T 1wyu_B          381 P-PEG--------FRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETE---AKETLEAFAEAM  434 (474)
T ss_dssp             C-STT--------CCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTS---CHHHHHHHHHHH
T ss_pred             c-CCC--------CCHHHHHHHHHHCCccccccccccccCCEEEEEeecCC---CHHHHHHHHHHH
Confidence            3 110        0135688889999998632211   2578999988665   589999999985

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=98.02  E-value=2.3e-05  Score=72.40  Aligned_cols=160  Identities=12%  Similarity=-0.031  Sum_probs=89.0

Q ss_pred             ccccceEEehhHhhchhcc--chhhhhcccCC--cch-----HHHhhcCCccccc--eeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDN--GTYLGFQCLQI--CRF-----VQKDFKGSFWDKL--IVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRT--G~~fA~e~~GV--~PD-----i~KaLgGG~~Pig--Av~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..||+++|+||++..+...  |.  ....+++  ..|     ++|.   |. |+|  ++++++++++.+......     
T Consensus       170 ~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~~~d~~~~s~sK~---g~-~~G~g~~~~~~~~~~~~~~~~~~-----  238 (356)
T 1v72_A          170 KSSSLGLHMDGSRFANALVSLGC--SPAEMTWKAGVDALSFGATKN---GV-LAAEAIVLFNTSLATEMSYRRKR-----  238 (356)
T ss_dssp             HHTTCEEEEEETTHHHHHHHHTC--CTTTTTGGGTCCEEEECCGGG---TC-SSCEEEEESSGGGHHHHHHHHHH-----
T ss_pred             HHcCCeEEEEchhhHhHhccCCC--CHHHhhhhhcCCEEEEecccC---CC-cCccEEEEECHHHHhhHHHHhhc-----
Confidence            4679999999999755221  11  1112221  244     4698   33 887  666788888765430000     


Q ss_pred             ccchhhhcc-HHHHHHHH---hhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCCh
Q psy7882          74 AHKLKISDT-VRPHVQIK---KSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        74 ~hg~T~agn-lA~aaala---~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~  147 (329)
                       .+...+.. .+..++++   .+.+++ .++..++.++|.+.|+++    +.+.-+. ..+.++.+.+.           
T Consensus       239 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~-----------  302 (356)
T 1v72_A          239 -AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL----GGVEVLGGTEANILFCRLD-----------  302 (356)
T ss_dssp             -TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC----TTEEEESCCCSSEEEEEEC-----------
T ss_pred             -cCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC----CCcEEccCCCccEEEEEcC-----------
Confidence             11111112 23222222   122222 456677777777776543    2221111 12333334431           


Q ss_pred             HHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         ..+.+.|.++||++.++....+.+|+.+++.+   +++|++++++++
T Consensus       303 ---~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~---~~~~i~~~~~~l  346 (356)
T 1v72_A          303 ---SAMIDALLKAGFGFYHDRWGPNVVRFVTSFAT---TAEDVDHLLNQV  346 (356)
T ss_dssp             ---HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             ---HHHHHHHHhcCeEEeccccCCCeEEEEecCCC---CHHHHHHHHHHH
Confidence               14778888999999864222589999988876   589999999975

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=98.00  E-value=2.7e-05  Score=77.06  Aligned_cols=176  Identities=8%  Similarity=-0.034  Sum_probs=103.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCc-cc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPA-HK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~-hg   76 (329)
                      ..||++|++||++.|+...+. +.....|+ .+|     ..|.+++++ ++|+++++++. ++.+..  ..   .+. ++
T Consensus       285 ~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~-~~G~l~~~~~~~~~~~~~--~~---~yl~~~  357 (497)
T 2qma_A          285 VKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTI-SCGALLVNDKSNFKFLLH--HA---DYLNRE  357 (497)
T ss_dssp             HHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCS-SCEEEEESCGGGGGGGCC-------------
T ss_pred             HHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCc-ceEEEEEeCHHHHHHhcC--Cc---hhcCCc
Confidence            457999999999999987665 55555677 778     359999885 89999987654 333321  00   011 11


Q ss_pred             hhhhc-------------c-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882          77 LKISD-------------T-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD  138 (329)
Q Consensus        77 ~T~ag-------------n-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d  138 (329)
                      .+...             . +++.++++.   +-+++ +++..+++++|.+.|+++. .+..+...  .+.++.+.+...
T Consensus       358 ~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~  434 (497)
T 2qma_A          358 HDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTND-QFELLAEP--SLSTVLFRATHE  434 (497)
T ss_dssp             ------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCT-TEEECSCC--SSSEEEEEECCS
T ss_pred             cccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEcCC--CceEEEEEEcCC
Confidence            11001             1 233333332   22333 6677888888888877531 11122222  345777777532


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      ..   . .......+...+.++|+++.+...  ....+|+.. +...   |++||+++++++
T Consensus       435 ~~---~-~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~---t~edi~~~~~~l  489 (497)
T 2qma_A          435 TA---D-LDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCL---TTSDFESLLSKI  489 (497)
T ss_dssp             SS---C-HHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             cc---C-HHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCC---CHHHHHHHHHHH
Confidence            10   0 013455678889999998764211  235899975 5544   589999999975

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=97.99  E-value=5.9e-05  Score=71.52  Aligned_cols=168  Identities=10%  Similarity=0.010  Sum_probs=91.9

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCC--cch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQI--CRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV--~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||+++ |+...|     .+.+.  ..|     ++|+++|+  ..|.++++ +++.+.+..  .     ..+
T Consensus       189 ~~~~~~li~Dea~~~g~~~~~-----~~~~~~~~~di~~~s~sK~l~g~--~~G~~~~~~~~~~~~~~~--~-----~~~  254 (417)
T 3n0l_A          189 DEIGAYLFADIAHIAGLVVAG-----EHPSPFPYAHVVSSTTHKTLRGP--RGGIIMTNDEELAKKINS--A-----IFP  254 (417)
T ss_dssp             HHHTCEEEEECTTTHHHHHTT-----SSCCCTTTCSEEEEESSTTTCSC--SCEEEEESCHHHHHHHHH--H-----HTT
T ss_pred             HHcCCEEEEECccchhhhhcc-----cCCCccccceEEEeeCccccCCC--CeeEEEECCHHHHHHHhh--h-----hCC
Confidence            45799999999974 442222     12222  236     34999554  46888887 688877653  1     112


Q ss_pred             chhhhcc-H---HHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          76 KLKISDT-V---RPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        76 g~T~agn-l---A~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      +.+.+.+ .   ++++++..   +.+++ .+++.++.++|.+.|++.  ....+.. ...+.++.+.+....     .  
T Consensus       255 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~~~~~~~~-----~--  324 (417)
T 3n0l_A          255 GIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR--KFKLVSD-GTDNHLVLMSFLDRE-----F--  324 (417)
T ss_dssp             TTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG-SCSSSEEEEECTTSS-----S--
T ss_pred             cccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CceeccC-CCCceEEEEEcccCC-----C--
Confidence            2222222 2   22222221   11222 556777777777777662  1111110 012334555553211     0  


Q ss_pred             HHHHHHHHHHHHCCceeeccC--------CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGG--------LSGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G--------~~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                       ....+.+.|.++||++.+..        ...+.+|+.++.+.+ ..+++||+++++++
T Consensus       325 -~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l  382 (417)
T 3n0l_A          325 -SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYI  382 (417)
T ss_dssp             -CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHH
Confidence             13456777888999987532        123668998775432 34689999999985

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=97.99  E-value=1.8e-05  Score=73.93  Aligned_cols=175  Identities=6%  Similarity=-0.082  Sum_probs=98.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HH--HhhcCCccccceeeec--hhHHHhhhhhhhccC----C
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTS--TCTFENFIKIKYQIL----K   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~--~eI~d~~~~~~~~~~----~   71 (329)
                      ..+|+++|.||+++. |...   ....++..+|     ++  |.++.|   +|+++++  +++++.+........    .
T Consensus       145 ~~~~~~li~D~a~~~-~~~~---~~~~~~~~~~i~~~s~s~~K~~~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (375)
T 2fnu_A          145 KKHSLSFLSDSSHAL-GSEY---QNKKVGGFALASVFSFHAIKPITTA---EGGAVVTNDSELHEKMKLFRSHGMLKKDF  217 (375)
T ss_dssp             HHHTCEEEEECTTCT-TCEE---TTEETTSSSSEEEEECCTTSSSCCS---SCEEEEESCHHHHHHHHHHTBTTEEESSS
T ss_pred             HHcCCEEEEECcccc-CCeE---CCeeccccCCeEEEeCCCCCCcccc---CceEEEeCCHHHHHHHHHHHhcCCccccc
Confidence            357999999999974 3321   1123444456     45  998654   6777764  667776543100000    0


Q ss_pred             -C---Cccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee---eEEeeceeeEEEeecCCCC
Q psy7882          72 -T---PAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG---DVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        72 -~---~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~---~VRG~GLm~gIef~~d~~~  141 (329)
                       .   ..++.+++.+ ++++.++.. +.+++ .++.+++.++|.+.|+++. ......   ..++.+.++.+.+....  
T Consensus       218 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--  294 (375)
T 2fnu_A          218 FEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNP-YFTPLHPLLKDKSSNHLYPILMHQKF--  294 (375)
T ss_dssp             SCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCS-SEEESGGGCSSCCCCSCEEEEECGGG--
T ss_pred             cccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CccccCCCCCCCcceEEEEEEeCccc--
Confidence             0   0122233444 666665544 44444 6777888888888776631 110111   11233455566664210  


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeecc-CC----------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRG-GL----------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~-G~----------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         .  .....+.+.|.++||.+... .+                      ..+.+|+.+....   +++|++++++++
T Consensus       295 ---~--~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~---t~~~i~~~~~~l  365 (375)
T 2fnu_A          295 ---F--TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANL---NLESVQNIAHSV  365 (375)
T ss_dssp             ---G--GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             ---c--chHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCC---CHHHHHHHHHHH
Confidence               0  02456888889999998731 00                      0157999877655   589999999985

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=97.98  E-value=3.3e-05  Score=73.56  Aligned_cols=166  Identities=10%  Similarity=-0.108  Sum_probs=86.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ..+|+++|+||++++ |..    ........+|     ++|. .|+ .++|++++++++.+.+.+...+. .....-.+.
T Consensus       190 ~~~~~~li~Dea~~~-~~~----~~~~~~~~~di~~~s~sK~-~g~-~g~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  261 (423)
T 3lvm_A          190 RARGIIYHVDATQSV-GKL----PIDLSQLKVDLMSFSGHKI-YGP-KGIGALYVRRKPRVRIEAQMHGG-GHERGMRSG  261 (423)
T ss_dssp             HHHTCEEEEECTTTT-TTS----CCCTTTSCCSEEEEESTTT-TSC-SSCEEEEECBTTBCCCCCSSCSS-CTTTTTCCS
T ss_pred             HHcCCEEEEEhhhhc-CCC----CcChhhcCCCEEEechHHh-cCC-CCeEEEEEeccccCCCCccccCC-cccccccCC
Confidence            457999999999874 221    2233344578     3494 444 36999999988765543200000 000000112


Q ss_pred             hcc-HHHHHHHHh-hHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeE----EeeceeeEEEeecCCCCCCCCChH
Q psy7882          80 SDT-VRPHVQIKK-SVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDV----RGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        80 agn-lA~aaala~-~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~V----RG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      +.+ .++++..+. +.+    ++ .++.+++.++|.+.|++    .+.+.-+    .+.+.++.+.+.. .      +  
T Consensus       262 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~-~------~--  328 (423)
T 3lvm_A          262 TLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD----IEEVYLNGDLEHGAPNILNVSFNY-V------E--  328 (423)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----STTEEEESCSTTBCTTEEEEEETT-S------C--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCccccCCCeEEEEeCC-C------C--
Confidence            223 333332222 322    22 45566666666666643    3322211    1224566666621 1      1  


Q ss_pred             HHHHHHHHHHHCCceeeccCC---------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGL---------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~---------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+.+.|.+  +.+.+...                     ..+.+|+.+++..   +++|++++++++
T Consensus       329 -~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~---t~e~i~~~~~~l  392 (423)
T 3lvm_A          329 -GESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT---TEEEIDYTIELV  392 (423)
T ss_dssp             -HHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             -HHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCC---CHHHHHHHHHHH
Confidence             2345555555  55554210                     0378999998766   589999999985

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=97.98  E-value=2.3e-05  Score=73.70  Aligned_cols=172  Identities=6%  Similarity=-0.137  Sum_probs=93.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HH----HhhcC-Cccccceeeech-hHHHhhhhhhh-cc---CC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQ----KDFKG-SFWDKLIVHTST-CTFENFIKIKY-QI---LK   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~----KaLgG-G~~PigAv~~~~-eI~d~~~~~~~-~~---~~   71 (329)
                      ..+|+++|.||+++.. -   .+..+.+|..+|   ++    |++++ |.  .|+++++. ++.+.+..... +.   ..
T Consensus       148 ~~~~~~li~D~a~~~g-~---~~~~~~~~~~~d~~~~S~~~~K~l~~~g~--gg~~~~~~~~~~~~~~~~~~~g~~~~~~  221 (373)
T 3frk_A          148 KKYNLKLIEDAAQAHG-S---LYKGMKVGSLGDAAGFSFYPAKNLGSLGD--GGAVVTNDKDLAEKIKALSNYGSEKKYH  221 (373)
T ss_dssp             HHHTCEEEEECTTCTT-C---EETTEETTSSSSEEEEECCTTSSSCCSSS--CEEEEESCHHHHHHHHHHHBTTCSBTTB
T ss_pred             HHcCCEEEEECCcccC-C---EECCEeccccccEEEEeCcCCCccCccce--eEEEEeCCHHHHHHHHHHHhcCcccCCc
Confidence            3579999999999722 1   133456676678   34    99988 63  56666654 56655442001 10   01


Q ss_pred             CCccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          72 TPAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        72 ~~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      ....|.++..+ ++++.++.. +.+++ .++.+++.+++.+.|+++.-..+... .....-..+.+...           
T Consensus       222 ~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  290 (373)
T 3frk_A          222 HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE-----------  290 (373)
T ss_dssp             CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----------
T ss_pred             cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----------
Confidence            12234455555 666665554 44444 56677777777776654310011000 01111112222221           


Q ss_pred             HHHHHHHHHHHHCCceeeccCC--C-----------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL--S-----------------------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~--~-----------------------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       -...+.+.|.++||.+++..+  .                       ..++|+....   ..|++|||.+++++
T Consensus       291 -~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~---~~t~~di~~~~~~l  361 (373)
T 3frk_A          291 -KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWY---GMKNEEIEYVIDKI  361 (373)
T ss_dssp             -SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCT---TCCHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCC---CCCHHHHHHHHHHH
Confidence             134688889999999874310  0                       0466663222   34789999999985

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=97.96  E-value=0.00013  Score=67.78  Aligned_cols=163  Identities=9%  Similarity=-0.077  Sum_probs=94.4

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCc------
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPA------   74 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~------   74 (329)
                      .||+++|.||++..+.+.-.   ...+    |     +.|.++..  .+|.+++++++.+.+..  ..  ....      
T Consensus       164 ~~~~~li~D~a~~~~~~~~~---~~~~----di~~~s~sK~~~~~--G~G~~~~~~~~~~~~~~--~~--~~~~~~~~~~  230 (360)
T 1w23_A          164 INHAPLIADMSSDILSRPLK---VNQF----GMIYAGAQKNLGPS--GVTVVIVKKDLLNTKVE--QV--PTMLQYATHI  230 (360)
T ss_dssp             CCSSCEEEECTTTTTSSCCC---GGGC----SEEEEETTTTTSCT--TCEEEEEEHHHHCSCCT--TC--CGGGCHHHHH
T ss_pred             cCCceEEEechhhcCCCCcC---cccC----CEEEEEcccccCCC--CcEEEEEcHHHHhhccc--CC--cchhhhhhhh
Confidence            68999999999986543211   1222    6     45988632  47889999888765432  00  0000      


Q ss_pred             -cchhhhc-c-H---HHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---E-e-eceeeEEEeecC
Q psy7882          75 -HKLKISD-T-V---RPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---R-G-KGLMIGVDLVQD  138 (329)
Q Consensus        75 -hg~T~ag-n-l---A~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---R-G-~GLm~gIef~~d  138 (329)
                       ++.+++. + .   ++.++++.  +  -+++ .++.+++.+++.+.|+++    +.+..+   . + .|.++.+.+.. 
T Consensus       231 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~-  305 (360)
T 1w23_A          231 KSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES----NGFYVGHAEKGSRSLMNVTFNLRN-  305 (360)
T ss_dssp             HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT----TTSSEESSCGGGBCSSEEEEECSS-
T ss_pred             hccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc----cCcccccCCchhccCcEEEEEcCC-
Confidence             1222222 2 2   22233332  1  2333 556667777777777653    311011   1 1 25577777631 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                              ......+.+.|.++||.+.+.....+.+|+.+....   +++|++++++++
T Consensus       306 --------~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~---~~~~i~~~~~~l  353 (360)
T 1w23_A          306 --------EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAV---PIDACIALRELM  353 (360)
T ss_dssp             --------HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred             --------CccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCC---CHHHHHHHHHHH
Confidence                    122456778899999998764323578999987655   589999999875

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=97.96  E-value=4e-05  Score=71.01  Aligned_cols=165  Identities=12%  Similarity=0.035  Sum_probs=90.1

Q ss_pred             ccccceEEehhHhhchhc---cchhhhhcccCCcch-----HHHhhcCCccccce-eeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGD---NGTYLGFQCLQICRF-----VQKDFKGSFWDKLI-VHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR---TG~~fA~e~~GV~PD-----i~KaLgGG~~PigA-v~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|+||.+. ++-   .|.  ....++...|     ++|++++   |+|+ +++++++.+.+..  ..    ..+
T Consensus       163 ~~~~~~li~D~a~~-~~~~~~~~~--~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~--~~----~~~  230 (347)
T 1jg8_A          163 KEHGINVHIDGARI-FNASIASGV--PVKEYAGYADSVMFCLSKGLCA---PVGSVVVGDRDFIERARK--AR----KML  230 (347)
T ss_dssp             HHHTCEEEEEETTH-HHHHHHHCC--CHHHHHHTCSEEEEESSSTTCC---SSCEEEEECHHHHHHHHH--HH----HHH
T ss_pred             HHCCCEEEeehhhh-hcchhhcCC--ChHHhcccccEEEEecccccCC---CceEEEEcCHHHHHHHHH--HH----HHc
Confidence            35799999999764 321   111  0000101123     5699864   5774 5567777765432  00    011


Q ss_pred             chhhhcc-HHHHHHHHh-hH-HhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          76 KLKISDT-VRPHVQIKK-SV-LERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        76 g~T~agn-lA~aaala~-~i-le~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++++..+ +++++++.. +. .+.+.+..+..+++.+.|+++  ...... ....|.++.+++....     .   ....
T Consensus       231 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~-~~~~~~~~~~~~~~~~-----~---~~~~  299 (347)
T 1jg8_A          231 GGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI--GYSVNP-EDVKTNMVILRTDNLK-----V---NAHG  299 (347)
T ss_dssp             TCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH--TCBCCG-GGCCSSEEEEECTTSS-----S---CHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--Cceecc-CCCcceEEEEEccccc-----C---CHHH
Confidence            2222222 333322222 11 112444555667788878765  222111 1123556667763211     0   1345


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||++.+.+  .+.+|+.+++.+   +++|++++++++
T Consensus       300 ~~~~l~~~gi~v~~~~--~~~iRl~~~~~~---~~e~i~~~~~~l  339 (347)
T 1jg8_A          300 FIEALRNSGVLANAVS--DTEIRLVTHKDV---SRNDIEEALNIF  339 (347)
T ss_dssp             HHHHHHHHTEECEEEE--TTEEEEECCTTS---CHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEecCC--CCeEEEEeCCCC---CHHHHHHHHHHH
Confidence            8888889999998754  578999887766   589999999875

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=97.95  E-value=2.4e-05  Score=73.68  Aligned_cols=143  Identities=10%  Similarity=-0.037  Sum_probs=83.7

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch---H----HHhhcC-Cccccceeee-chhHHHhhhhhh-hccCCC-
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---V----QKDFKG-SFWDKLIVHT-STCTFENFIKIK-YQILKT-   72 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i----~KaLgG-G~~PigAv~~-~~eI~d~~~~~~-~~~~~~-   72 (329)
                      .++|+++|.||+|+ |+...|.     ..+.-+|   +    .|.+++ |.  .|++++ ++++++.+.... .+.... 
T Consensus       147 ~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~Sf~~~K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~  219 (367)
T 3nyt_A          147 SKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACTSFFPSAPLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRY  219 (367)
T ss_dssp             HHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEEECCTTSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETT
T ss_pred             HHcCCEEEEECccccCCeECCe-----eccCCCCEEEEECCCCCcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCc
Confidence            45799999999997 4543333     2333348   2    399988 74  666766 467776654300 000000 


Q ss_pred             --Cccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee-eEEeeceeeEEEeecCCCCCCCCC
Q psy7882          73 --PAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG-DVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        73 --~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~-~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                        ...|.++..+ ++++++++. +.+++ .++.+++.+++.+.|+++--..+... .......++.+.+. +        
T Consensus       220 ~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------  290 (367)
T 3nyt_A          220 HHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD-N--------  290 (367)
T ss_dssp             EECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS-S--------
T ss_pred             eeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC-C--------
Confidence              1224567777 777777766 55555 67788888899888887621112111 11222223333332 1        


Q ss_pred             hHHHHHHHHHHHHCCceeec
Q psy7882         147 SRHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~  166 (329)
                         ...+.+.|.++||.+++
T Consensus       291 ---~~~l~~~L~~~GI~~~~  307 (367)
T 3nyt_A          291 ---RESVQASLKAAGVPTAV  307 (367)
T ss_dssp             ---HHHHHHHHHHHTCCCBC
T ss_pred             ---HHHHHHHHHHCCCceec
Confidence               34588889999998875

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=97.95  E-value=2.1e-05  Score=76.30  Aligned_cols=89  Identities=12%  Similarity=0.050  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec--CCCCCCCCChHH-HHHHHHHH-HHCCceeeccCC---
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ--DKETKVPLNSRH-MTHILDSC-KEHGLLLGRGGL---  169 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~--d~~~~~p~~~~~-~~~~~~~l-~e~GVLl~~~G~---  169 (329)
                      +++..+++++|.+.|+++  .++.+ ..+  |.++.+.+..  +...    ..++ ...+...| .++||++.+.+.   
T Consensus       327 ~~~~~~~~~~l~~~L~~~--~~~~~-~~~--~~~~~~~~~~~~~~~~----~~~~~~~~l~~~L~~~~gv~~~~~~~~~~  397 (467)
T 2oqx_A          327 LAYRIAQVQYLVDGLEEI--GVVCQ-QAG--GHAAFVDAGKLLPHIP----ADQFPAQALACELYKVAGIRAVEIGSFLL  397 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHT--TCCEE-EEC--SSCEEEEHHHHSTTSC----GGGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred             HHHHHHHHHHHHHHHHHC--CCeee-cCC--ceEEEEechhhcccCC----cccccHHHHHHHHHHhcCceecccccccc
Confidence            566778889999999886  45555 444  4445555531  1100    0122 45678888 889999987441   


Q ss_pred             ------------CCCEEEEeCccc-cCcCCHHHHHHHHhcc
Q psy7882         170 ------------SGNTLTALQPKL-LNYWTDFVGTPCLDCE  197 (329)
Q Consensus       170 ------------~~nvIrl~PPL~-It~~t~eeId~~l~~~  197 (329)
                                  ..+.+||.|++. +   +++||+++++++
T Consensus       398 ~~~~~~g~~~~~~~~~iRl~~~~~~~---t~e~i~~~~~~l  435 (467)
T 2oqx_A          398 GRDPKTGKQLPCPAELLRLTIPRATY---TQTHMDFIIEAF  435 (467)
T ss_dssp             CBCTTTCSBCCCSCCEEEECCCTTTS---CHHHHHHHHHHH
T ss_pred             cccccccccccCccCeEEEEecCCCC---CHHHHHHHHHHH
Confidence                        127999999987 6   589999999975

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=97.95  E-value=3.5e-05  Score=74.14  Aligned_cols=173  Identities=11%  Similarity=-0.026  Sum_probs=95.3

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch-----HH--HhhcCCccccceeeec-hhHHHhhhhhhh-ccCCCC-
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTS-TCTFENFIKIKY-QILKTP-   73 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~-~eI~d~~~~~~~-~~~~~~-   73 (329)
                      ..+|+++|.||+++ |+...|..     .+.-+|     ++  |+++||  .+|.++++ +++.+.+..... .....+ 
T Consensus       162 ~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~sk~K~l~~~--~~G~~v~~~~~l~~~l~~~~~~~~~~~~~  234 (424)
T 2po3_A          162 DEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVFSFHATKAVNAF--EGGAVVTDDADLAARIRALHNFGFDLPGG  234 (424)
T ss_dssp             HHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCCS--SCEEEEESCHHHHHHHHHHHBTTTTCTTC
T ss_pred             HHcCCEEEEECccccCCeECCee-----cccccCEEEEeCCCCCCccCC--CCeEEEeCCHHHHHHHHHHHhcCcccccc
Confidence            35799999999999 88766532     233367     33  999874  68888888 788776653101 100000 


Q ss_pred             --ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceee---EEe-e--ceeeEEEeecCCCCC
Q psy7882          74 --AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGD---VRG-K--GLMIGVDLVQDKETK  142 (329)
Q Consensus        74 --~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~---VRG-~--GLm~gIef~~d~~~~  142 (329)
                        .++.++..+ +++++++.. +.+++ .++..++.++|.+.|++    .+.+.-   ..| .  ..++.+.+.....  
T Consensus       235 ~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~~~~~~~~~~~i~~~~~~~--  308 (424)
T 2po3_A          235 SPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLAD----LPGVLVADHDRHGLNNHQYVIVEIDEATT--  308 (424)
T ss_dssp             CTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS----CTTEEECCGGGGSCCCCCCEEEEECHHHH--
T ss_pred             ccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCccccCCCCCCccccEEEEEEECCccc--
Confidence              122233334 666666554 44443 55566666666666543    222211   112 1  2566666642000  


Q ss_pred             CCCChHHHHHHHHHHHHCCceeecc-CCC---------------CCE-------EEEeCccccCcCCHHHHHHHHhcc
Q psy7882         143 VPLNSRHMTHILDSCKEHGLLLGRG-GLS---------------GNT-------LTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       143 ~p~~~~~~~~~~~~l~e~GVLl~~~-G~~---------------~nv-------Irl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..   -...+.+.|.++||++.+. +..               ++.       +++......   +++|++++++++
T Consensus       309 -~~---~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~---t~e~i~~~~~~L  379 (424)
T 2po3_A          309 -GI---HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAI---GDDDIRRVADLL  379 (424)
T ss_dssp             -SS---CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTC---CHHHHHHHHHHH
T ss_pred             -hh---hHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCC---CHHHHHHHHHHH
Confidence             00   1345778888999998762 100               011       444322333   689999999975

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=97.90  E-value=9.6e-05  Score=67.97  Aligned_cols=152  Identities=8%  Similarity=-0.008  Sum_probs=90.7

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcc-h-----HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICR-F-----VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~P-D-----i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +++ +|+||++.+|+..+...    ....+ +     ++|.++ .| +.+|.+++++++.+.+..        .  ..++
T Consensus       164 ~~~-~ivDea~~~~~~~~~~~----~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~--~~~~  227 (337)
T 3p1t_A          164 AGK-LLIDETYVDYSSFRARG----LAYGENELVFRSFSKSYGLAG-LRLGALFGPSELIAAMKR--------K--QWFC  227 (337)
T ss_dssp             CSE-EEEECTTGGGSSCSSSC----CCCBTTEEEEEESSSTTCCTT-TCCEEEECCHHHHHHHHT--------T--SCTT
T ss_pred             CCc-EEEECCChhhccccccc----cccCCCEEEEeeCchhccCcc-hheEEEEeCHHHHHHHHh--------h--cCCC
Confidence            455 55699999886554211    11111 2     469997 77 489999999999887753        1  1122


Q ss_pred             hcc-H---HHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          80 SDT-V---RPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        80 agn-l---A~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      +.+ +   +++++++. +.+++ .++..+..+++.+.|+++    +. .-....|.++.+.+..            ...+
T Consensus       228 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~~~~------------~~~~  290 (337)
T 3p1t_A          228 NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL----GY-RVASSEANFVLVENAA------------GERT  290 (337)
T ss_dssp             CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT----TC-CBCCCSSSEEEEECTT------------THHH
T ss_pred             CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----cC-EECCCCCeEEEEEcCC------------HHHH
Confidence            333 2   33334443 33333 455555556666666554    22 2233456666655421            1246


Q ss_pred             HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.|.++||++.++..  .++.+|+...      +++|++++++++
T Consensus       291 ~~~l~~~gi~v~~g~~~~~~~~iRis~~------~~~~~~~l~~al  330 (337)
T 3p1t_A          291 LRFLRERGIQVKDAGQFGLHHHIRISIG------REEDNDRLLAAL  330 (337)
T ss_dssp             HHHHHHTTEECEEGGGGTCCSEEEEECC------CHHHHHHHHHHH
T ss_pred             HHHHHHCCeEEEECccCCCCCeEEEecC------CHHHHHHHHHHH
Confidence            6778899999987532  2478998743      578999999875

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=97.88  E-value=3.6e-05  Score=71.73  Aligned_cols=165  Identities=11%  Similarity=-0.068  Sum_probs=91.1

Q ss_pred             ccc--ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH--HHhhhhhhhccCCCCccc
Q psy7882           6 YRD--CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT--FENFIKIKYQILKTPAHK   76 (329)
Q Consensus         6 ~~g--iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI--~d~~~~~~~~~~~~~~hg   76 (329)
                      .+|  +++|+||+++ +|...  +..+.  ..+|     ++|.++  ...+|++++++++  ...+..  ..   .....
T Consensus       167 ~~~~~~~li~Dea~~-~~~~~--~~~~~--~~~di~~~s~sK~~g--~~G~G~~~~~~~~~~~~~~~~--~~---~~~~~  234 (384)
T 1eg5_A          167 KKNKETLVHVDAVQT-IGKIP--FSLEK--LEVDYASFSAHKFHG--PKGVGITYIRKGVPIRPLIHG--GG---QERGL  234 (384)
T ss_dssp             HHCTTCEEEEECTTT-TTTSC--CCCTT--TCCSEEEEEGGGGTS--CTTCEEEEECTTSCCCCSBCS--SC---TTTTT
T ss_pred             hcCCceEEEEEhhhh-cCCcc--cCchh--cCCCEEEecHHHhcC--CCceEEEEEcCCCcccccccc--Cc---ccccc
Confidence            467  9999999997 65431  12222  2467     459643  2127889988875  211110  00   00011


Q ss_pred             hhhhcc-HHHHHHHHh-hH----HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCCCCCCCCChH
Q psy7882          77 LKISDT-VRPHVQIKK-SV----LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        77 ~T~agn-lA~aaala~-~i----le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      .+++.+ .+++++.+. +.    +++ .++.+++.++|.+.|++.  ....+....| .+.+..+.+.. .      +  
T Consensus       235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~-~------~--  303 (384)
T 1eg5_A          235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNL--GAHIITPLEISLPNTLSVSFPN-I------R--  303 (384)
T ss_dssp             BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT--TCEECSCTTSBCTTEEEEECTT-C------C--
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC--CeEEeCCcccCCCCEEEEEeCC-C------C--
Confidence            233444 444433333 22    222 566777777777777651  1111111111 45666666631 1      1  


Q ss_pred             HHHHHHHHHHHCCceeeccC---C------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGG---L------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G---~------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+.+.|.++||++.+..   .                  ..+.+|+.+....   +++|++++++++
T Consensus       304 -~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  369 (384)
T 1eg5_A          304 -GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYN---TEEEVDYFLKKI  369 (384)
T ss_dssp             -HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             -HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCC---CHHHHHHHHHHH
Confidence             2457788889999998721   1                  0368999987655   589999999985

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=97.81  E-value=0.00036  Score=64.31  Aligned_cols=168  Identities=9%  Similarity=-0.137  Sum_probs=94.0

Q ss_pred             ccccc-cceEEehhHhhchhccchhhhhcccCCc-ch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC-CCC-
Q psy7882           3 TTYYR-DCGVVVSAVDFGSGDNGTYLGFQCLQIC-RF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-KTP-   73 (329)
Q Consensus         3 ~~~~~-giLLI~DEVqTGfGRTG~~fA~e~~GV~-PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~~~-   73 (329)
                      +-..| |+++|.||++..+...        ..+. .|     ..|.++|+. .+|.+.+++++.+.+.....+.. ... 
T Consensus       155 la~~~p~~~li~D~a~~~~~~~--------~~~~~~d~~~~s~~K~~~~~~-G~g~~~~~~~~~~~~~~~~~gg~~~~~~  225 (362)
T 3ffr_A          155 FRDKNKDALIFVDAVSSLPYPK--------FDWTKIDSVFFSVQKCFGLPA-GLGVWILNDRVIEKSKALLAKRKSIGTY  225 (362)
T ss_dssp             SGGGSTTSEEEEECTTTTTSSC--------CCTTSCSEEEEETTSTTCCCS-CCEEEEEEHHHHHHHHHHHHTTCCCCST
T ss_pred             HHHhCCCCEEEEecccccCCcc--------cChhHCcEEEEecccccCCCC-ceEEEEECHHHHHHhhhccccCCCCccc
Confidence            44577 9999999997633221        1111 56     459998542 56888899988876653111000 000 


Q ss_pred             cc----------ch-hhhcc-H---HHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-----Eeece
Q psy7882          74 AH----------KL-KISDT-V---RPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-----RGKGL  129 (329)
Q Consensus        74 ~h----------g~-T~agn-l---A~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-----RG~GL  129 (329)
                      ..          +. .++.+ .   ++.++++.   +-+++ .++..++.+++.+.|+++    |.+.-+     ...+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~  301 (362)
T 3ffr_A          226 HTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESS----KVFSFGVEDAKLRSMT  301 (362)
T ss_dssp             TSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC----SSEEESSSCGGGBCSS
T ss_pred             ccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc----cCceeccCChhhcCCc
Confidence            00          00 11222 2   22233321   00222 556666677777766543    322111     11345


Q ss_pred             eeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         130 MIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       130 m~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++.+.+..           ....+.+.|.++||.+.+..  ..++.+|+.+....   +++|++++++++
T Consensus       302 ~~~~~~~~-----------~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~---~~e~i~~l~~~l  357 (362)
T 3ffr_A          302 TIVANTTM-----------LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAH---SLEQVHKLVQTL  357 (362)
T ss_dssp             EEEEEESS-----------CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTS---CHHHHHHHHHHH
T ss_pred             eEEEecCC-----------CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            55666532           13468888999999998631  13678999987644   689999999875

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=97.77  E-value=0.00011  Score=70.99  Aligned_cols=51  Identities=6%  Similarity=-0.138  Sum_probs=37.2

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHH-hhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFE-NFI   63 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d-~~~   63 (329)
                      +|+++|.||+++.+... ..+  + +|  .|     ++|.+++...++ |.+++++++.+ .+.
T Consensus       177 ~~~~li~De~~~~~~~~-~~~--~-~~--~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~  234 (404)
T 1e5e_A          177 EGVLVIADNTFCSPMIT-NPV--D-FG--VDVVVHSATKYINGHTDVVAGLICGKADLLQQIRM  234 (404)
T ss_dssp             TTCEEEEECTTTCTTTC-CGG--G-GT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHH
T ss_pred             cCCEEEEECCCchhhhC-Ccc--c-cC--CEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHH
Confidence            89999999999977532 111  1 33  55     569998755687 99999998877 565

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=97.75  E-value=0.00017  Score=69.68  Aligned_cols=53  Identities=13%  Similarity=-0.083  Sum_probs=36.0

Q ss_pred             cccc-ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcC-Cccccceeeec-hhHHHhhh
Q psy7882           5 YYRD-CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKG-SFWDKLIVHTS-TCTFENFI   63 (329)
Q Consensus         5 ~~~g-iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgG-G~~PigAv~~~-~eI~d~~~   63 (329)
                      ..+| +++|+||+++++.. +.     .....+|     +.|.++| |...+|+++++ +++.+.+.
T Consensus       178 ~~~g~~~livD~~~~~~~~-~~-----~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~  238 (403)
T 3cog_A          178 HKHGDIILVVDNTFMSPYF-QR-----PLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLR  238 (403)
T ss_dssp             TSSSCCEEEEECTTTCTTT-CC-----TTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHH
T ss_pred             HHcCCCEEEEECCCccccc-CC-----ccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHH
Confidence            3578 99999999987632 11     2234577     4699986 32357888885 67777665

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=97.73  E-value=0.00078  Score=63.97  Aligned_cols=167  Identities=14%  Similarity=0.051  Sum_probs=94.5

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhc-c-CCCCc-----
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQ-I-LKTPA-----   74 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~-~-~~~~~-----   74 (329)
                      +|+++|.||++..+.+.-.   .+    .+|     ..|.++.+. -+|.+++++++.+.+...... . ..++.     
T Consensus       191 ~~~~vivD~a~~~~~~~~~---~~----~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  262 (398)
T 2fyf_A          191 DDALVVIDATSGAGGLPVD---IA----ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIA  262 (398)
T ss_dssp             C-CEEEEECTTTTTTSCCC---GG----GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHH
T ss_pred             cCCeEEEEeccccCCcccC---cc----cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHHH
Confidence            7999999999986543211   11    257     359988762 378888999887765310000 0 00000     


Q ss_pred             -----cchhhh-cc-H---HHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE---E--eeceeeEEE
Q psy7882          75 -----HKLKIS-DT-V---RPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVGDV---R--GKGLMIGVD  134 (329)
Q Consensus        75 -----hg~T~a-gn-l---A~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~~V---R--G~GLm~gIe  134 (329)
                           ++.+++ .+ .   ++.++++.  +.  +++ .++.+++.+++.+.|+++    +.+.-+   .  ..+.++.+.
T Consensus       263 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~  338 (398)
T 2fyf_A          263 VENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER----PYTTPFVTDPGLRSQVVGTID  338 (398)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS----TTEEESCCSGGGBCSSEEEEE
T ss_pred             hhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc----CCceeccCChhhcCCcEEEEE
Confidence                 112222 22 2   23333332  11  333 566777777777777654    211111   1  124477777


Q ss_pred             eecCCCCCCCCChHHHHHHHHHHHHCCceeeccC--CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         135 LVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG--LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       135 f~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G--~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +..+      .+   ...+.+.|.++||.+.+..  ..++.+|+.+....   +++|++++++++
T Consensus       339 ~~~~------~~---~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~---t~e~i~~~~~~l  391 (398)
T 2fyf_A          339 FVDD------VD---AGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAV---EPDDVSALTECV  391 (398)
T ss_dssp             ECTT------SC---HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTS---CHHHHHHHHHHH
T ss_pred             CCCC------CC---HHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCC---CHHHHHHHHHHH
Confidence            7321      01   3468888999999997631  12478999987655   589999999975

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=97.73  E-value=1.2e-05  Score=76.66  Aligned_cols=160  Identities=9%  Similarity=-0.065  Sum_probs=85.4

Q ss_pred             ccccceEEehhHhhchhccc---hhhhhccc-CCcc---h------HHHhhcC-Cccccceee--e-----chh----HH
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG---TYLGFQCL-QICR---F------VQKDFKG-SFWDKLIVH--T-----STC----TF   59 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG---~~fA~e~~-GV~P---D------i~KaLgG-G~~PigAv~--~-----~~e----I~   59 (329)
                      ..||+++|.||++.+|+..|   .......+ ...+   +      ++|.++. | +++|.++  +     +++    +.
T Consensus       206 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~  284 (412)
T 1yaa_A          206 ASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVT  284 (412)
T ss_dssp             HHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHH
T ss_pred             HHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHH
Confidence            35799999999999997655   22233221 1233   3      4699988 7 4899887  6     566    66


Q ss_pred             HhhhhhhhccCCCCccchhhhcc-HHHH---HHHHh-h-------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe
Q psy7882          60 ENFIKIKYQILKTPAHKLKISDT-VRPH---VQIKK-S-------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG  126 (329)
Q Consensus        60 d~~~~~~~~~~~~~~hg~T~agn-lA~a---aala~-~-------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG  126 (329)
                      +.+..        .....+.+.+ ++++   ++++. +       .+++ .+++++..+++.+.|+++-... .+.-+..
T Consensus       285 ~~l~~--------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~  355 (412)
T 1yaa_A          285 SQLAK--------IIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVN  355 (412)
T ss_dssp             HHHHH--------HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCTHHHH
T ss_pred             HHHHH--------HHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-Ceeeecc
Confidence            55442        0111112223 3333   33332 2       1222 4556667777777776642100 0111112


Q ss_pred             e-ceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         127 K-GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       127 ~-GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . |++.-+.+          +.   ..+...+.++||++.+      .+|+.+.. .   +++|++++++++
T Consensus       356 ~~~~~~~~~~----------~~---~~~~~~l~~~gi~v~~------~~Ris~~~-~---~~~~i~~~~~~l  404 (412)
T 1yaa_A          356 QCGMFSFTGL----------TP---QMVKRLEETHAVYLVA------SGRASIAG-L---NQGNVEYVAKAI  404 (412)
T ss_dssp             CCSSEEECCC----------CH---HHHHHHHHHHCEECCT------TSEEEGGG-C---CTTTHHHHHHHH
T ss_pred             CceEEEeeCC----------CH---HHHHHHHHhCCEEecc------CcEEEEcc-C---CHhHHHHHHHHH
Confidence            2 33221111          11   2344455578999875      25787763 2   467888888875

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=97.70  E-value=0.00016  Score=69.01  Aligned_cols=157  Identities=12%  Similarity=-0.009  Sum_probs=85.0

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch---H--HHhhcCCccccceeeec-hhHHHhhhhhhhccC---CC--
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---V--QKDFKGSFWDKLIVHTS-TCTFENFIKIKYQIL---KT--   72 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i--~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~---~~--   72 (329)
                      ..+|+++|.||+++ |+...|....  .++ ..|   +  .|+++|+  -+|+++++ +++++.+........   ..  
T Consensus       146 ~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~~~~s~s~~K~l~~~--~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~  220 (394)
T 1o69_A          146 KENDIVLIEDAAEALGSFYKNKALG--TFG-EFGVYSYNGNKIITTS--GGGMLIGKNKEKIEKARFYSTQARENCLHYE  220 (394)
T ss_dssp             HHTTCEEEEECTTCTTCEETTEETT--SSS-SEEEEECCTTSSSCCS--SCEEEEESCHHHHHHHHHHTBTCCCSSSSCC
T ss_pred             HHcCCEEEEECcCcccceeCCcccc--ccc-CcEEEEEeCCccCCCC--CceEEEECCHHHHHHHHHHHHhccccCcccc
Confidence            35799999999999 8765553211  111 255   3  5988865  48889995 788777653101100   00  


Q ss_pred             -Cccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeece-eeEEEeecCCCCCC----
Q psy7882          73 -PAHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGL-MIGVDLVQDKETKV----  143 (329)
Q Consensus        73 -~~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GL-m~gIef~~d~~~~~----  143 (329)
                       ...|.++... ++++.++.. +.+++ .++.+++.+++.+.|+++ -+.....+.+..+. ++.+.+..+...+.    
T Consensus       221 ~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  299 (394)
T 1o69_A          221 HLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQK  299 (394)
T ss_dssp             CSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCE
T ss_pred             ccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccc
Confidence             0112222233 666666555 55555 778888888998888765 21111101111122 45566642100000    


Q ss_pred             ----CC----ChHHHHHHHHHHHHCCceeecc
Q psy7882         144 ----PL----NSRHMTHILDSCKEHGLLLGRG  167 (329)
Q Consensus       144 ----p~----~~~~~~~~~~~l~e~GVLl~~~  167 (329)
                          .+    .......+.+.|.++||.+++.
T Consensus       300 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~  331 (394)
T 1o69_A          300 DINISQKNITLHPKISKLIEDLKNKQIETRPL  331 (394)
T ss_dssp             EEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred             cccccccccccccCHHHHHHHHHHcCCccccc
Confidence                00    0012456888899999998764

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=97.69  E-value=0.0003  Score=65.56  Aligned_cols=167  Identities=13%  Similarity=0.045  Sum_probs=91.5

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHH-hhhhh-------------hh-
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFE-NFIKI-------------KY-   67 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d-~~~~~-------------~~-   67 (329)
                      |+++|.||+++ +|..  .+..+.+  .+|     +.|.++|+. ++|++++++++++ .+...             .. 
T Consensus       169 ~~~li~D~a~~-~~~~--~~~~~~~--~~d~~~~s~~K~~~~~~-G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  242 (385)
T 2bkw_A          169 ETFFVVDAVCS-IGCE--EFEFDEW--GVDFALTASQKAIGAPA-GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWT  242 (385)
T ss_dssp             TSEEEEECTTT-TTTS--CCCTTTT--TCSEEEEESSSTTCCCS-CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHH
T ss_pred             CCEEEEECccc-cCCc--ccccccc--CceEEEecCccccccCC-cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHh
Confidence            89999999997 3322  1222223  367     359998763 6799999988876 43100             00 


Q ss_pred             ccCCCCc--cchh-hhcc-HHHHHHHHh-hH-----HhH-HHHHHHHHHHHHHHH-HHHHHhCCcee-eE-E-eeceeeE
Q psy7882          68 QILKTPA--HKLK-ISDT-VRPHVQIKK-SV-----LER-FVHTYVVGNFLLTHL-SKLREEFAIVG-DV-R-GKGLMIG  132 (329)
Q Consensus        68 ~~~~~~~--hg~T-~agn-lA~aaala~-~i-----le~-le~v~~lG~~L~~gL-~eL~~~~p~v~-~V-R-G~GLm~g  132 (329)
                      .....+.  .+.+ ++.+ .+++++.+. +.     +++ .++.+++.+++.+.| +++  ....+. +- . ..|.++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g~~~~~~~~~~~~~~~~~~  320 (385)
T 2bkw_A          243 PIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL--QLTSVSRYPSNMSAHGLTA  320 (385)
T ss_dssp             HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT--CCEESSCSSSTTBCSSCEE
T ss_pred             hHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc--CceecccCcccccCCceEE
Confidence            0000000  0011 1233 333332222 22     222 566777777777777 553  111111 00 0 2466777


Q ss_pred             EEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEe-Cc---cccCcCCHHHHHHHHhcc
Q psy7882         133 VDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTAL-QP---KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~-PP---L~It~~t~eeId~~l~~~  197 (329)
                      +.+..            ...+.+.|.++||.+.+...   ..+.+|+. -+   +..   +++|++++++++
T Consensus       321 ~~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~---~~e~i~~~~~~l  377 (385)
T 2bkw_A          321 VYVAD------------PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNK---NLPYMKNCFDLI  377 (385)
T ss_dssp             EECSC------------HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSST---TCTHHHHHHHHH
T ss_pred             EecCC------------HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccC---CHHHHHHHHHHH
Confidence            76631            34578888899999987421   25789988 33   223   468999999875

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=97.66  E-value=5.5e-05  Score=75.07  Aligned_cols=51  Identities=10%  Similarity=-0.070  Sum_probs=35.2

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCCcch-----HHHhhcC--Cccccceeeech-hHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-----VQKDFKG--SFWDKLIVHTST-CTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-----i~KaLgG--G~~PigAv~~~~-eI~d~~~   63 (329)
                      ..||+++|+||+++.    |..+ ..+ +  .+|     ++|.++|  | +++|++++++ ++.+.+.
T Consensus       244 ~~~gi~livDea~~~----g~~~~~~~-~--~~div~~S~sK~~~g~~G-l~~G~l~~~~~~l~~~l~  303 (464)
T 1ibj_A          244 HAQGALVLVDNSIMS----PVLSRPLE-L--GADIVMHSATKFIAGHSD-VMAGVLAVKGEKLAKEVY  303 (464)
T ss_dssp             HTTTCEEEEECTTTC----TTTCCGGG-T--TCSEEEEETTTTTTCSSC-CCCEEEEECSHHHHHHHH
T ss_pred             HHcCCEEEEECCCcc----cccCChhh-c--CCEEEEECCcccccCCCC-CcEEEEEEChHHHHHHHH
Confidence            457999999999973    2221 122 3  367     4699987  6 4789999985 7777665

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=97.60  E-value=3.5e-05  Score=74.05  Aligned_cols=168  Identities=10%  Similarity=-0.051  Sum_probs=84.8

Q ss_pred             ccccceEEehhHhhchhccc--hhhhhccc-CCcch------HHHhhc-CCccccceeee---chhHHHhhhhhhhcc-C
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG--TYLGFQCL-QICRF------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQI-L   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG--~~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~-~   70 (329)
                      ..||+++|.||+..+|+..|  ...+...+ +..++      ++|.++ .| +++|.+++   ++++++.+....... .
T Consensus       225 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~  303 (420)
T 4f4e_A          225 KARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYG-ERVGALSIITDSKDEAARVLSQLKRVIR  303 (420)
T ss_dssp             HHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             HHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcC-CCcEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            35799999999999997654  12222222 22232      569998 57 48988653   556555432100000 0


Q ss_pred             CCCccchhhhccHHHHHHHHh-hH-------HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          71 KTPAHKLKISDTVRPHVQIKK-SV-------LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        71 ~~~~hg~T~agnlA~aaala~-~i-------le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                      ....++++++. .+.++++.. .+       +++ .++.+++.++|.+.|+++....+........|++..+.+.     
T Consensus       304 ~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----  377 (420)
T 4f4e_A          304 TNYSNPPTHGG-AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-----  377 (420)
T ss_dssp             TTTSSCCSHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----
T ss_pred             cccCCCCHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----
Confidence            00111111111 122222322 11       222 4556667777777776653211211111223444332221     


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                              ...+...+.++||++.+.+      |+.... +   ++++|+++++++
T Consensus       378 --------~~~~~~~l~~~gI~v~~~~------Ris~~~-~---~~~~i~~~~~~l  415 (420)
T 4f4e_A          378 --------SAQVDRLREEFGIYAVSTG------RICVAA-L---NTRNLDVVANAI  415 (420)
T ss_dssp             --------HHHHHHHHHHHCEECCTTS------EEEGGG-C---CTTTHHHHHHHH
T ss_pred             --------HHHHHHHHHhCCEEecCCC------eEEEec-C---CHHHHHHHHHHH
Confidence                    1235666778999998743      666542 2   356799998874

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=97.58  E-value=4.5e-05  Score=71.97  Aligned_cols=168  Identities=10%  Similarity=-0.049  Sum_probs=84.7

Q ss_pred             ccccceEEehhHhhchhccc--hhhhhccc-CCcch------HHHhhc-CCccccceeee---chhHHHhhhhhhhcc-C
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG--TYLGFQCL-QICRF------VQKDFK-GSFWDKLIVHT---STCTFENFIKIKYQI-L   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG--~~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~---~~eI~d~~~~~~~~~-~   70 (329)
                      ..||+++|.||+..+|...+  ...+...+ +..++      ++|.++ .| +++|.+++   ..++.+.+....... .
T Consensus       203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~  281 (397)
T 3fsl_A          203 KARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVR  281 (397)
T ss_dssp             HHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             HhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHH
Confidence            35799999999999987642  22222222 12222      569998 67 48998864   455554332100000 0


Q ss_pred             CCCccchhhhccHHHHHHHHh-h-------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          71 KTPAHKLKISDTVRPHVQIKK-S-------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        71 ~~~~hg~T~agnlA~aaala~-~-------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                      .....+++++.. ++++++.. .       .+++ .+++++..++|.+.|+++....+.......-|++..+.+.     
T Consensus       282 ~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----  355 (397)
T 3fsl_A          282 RNYSSPPNFGAQ-VVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-----  355 (397)
T ss_dssp             TTTSSCCSHHHH-HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC-----
T ss_pred             hccCCCCHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC-----
Confidence            011111222222 22222322 1       1222 4566777777777777653211111111123444333221     


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                              ...+...+.++||++.+.+      |+....    +++++|+++++++
T Consensus       356 --------~~~~~~~l~~~gi~v~~g~------Ris~~~----~~~~~i~~~~~~l  393 (397)
T 3fsl_A          356 --------AAQVDRLREEFGVYLIASG------RMCVAG----LNTANVQRVAKAF  393 (397)
T ss_dssp             --------HHHHHHHHHTTCEECCTTC------EEEGGG----CCTTTHHHHHHHH
T ss_pred             --------HHHHHHHHHhCCEEECCCC------eEEEEe----cCHhhHHHHHHHH
Confidence                    1235667778999998742      665432    2456799998874

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=97.57  E-value=0.00031  Score=69.09  Aligned_cols=140  Identities=9%  Similarity=-0.102  Sum_probs=84.4

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCcc-ccceeeechhHHHhhhhhhhccCCCCccchhhhcc
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFW-DKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDT   82 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~-PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~agn   82 (329)
                      +|+++|+||++.++...+...   .+|+...   ++|.|+||+. |-|.+++++++.+.+............++.++..+
T Consensus       200 ~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~  276 (431)
T 3ht4_A          200 PDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSL  276 (431)
T ss_dssp             TTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCS
T ss_pred             CCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHH
Confidence            799999999999886544322   2243222   5699999764 44778888888887653101100001233444444


Q ss_pred             HHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHh-CCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHC
Q psy7882          83 VRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREE-FAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEH  160 (329)
Q Consensus        83 lA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~-~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~  160 (329)
                      .++..++.. ...  +++..+...++.+.|+++--+ +|. .+.++.++|++|++.+         .+...++++.+.+.
T Consensus       277 ~~~~~~l~~~~~~--~~~~~~~a~~l~~~L~~~g~~v~p~-~~~~~~~li~~i~l~~---------~~~~~~~~~~l~~~  344 (431)
T 3ht4_A          277 QEMYQGFFLAPHV--AGQALKGAIFTAAFLEKLGMNTSPA-WNAPRTDLIQSVQFDD---------KDRMIAFCQAIQYA  344 (431)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCCEESC-TTSCCSSSCCEEECCC---------HHHHHHHHHHHHHT
T ss_pred             HHHHhHhhhHHHH--HHHHHHHHHHHHHHHHhCcCEecCC-CCCCCccEEEEEEeCC---------HHHHHHHHHHHHhc
Confidence            334444443 211  566777888888888776211 222 3557888899999952         24566788888876


Q ss_pred             C
Q psy7882         161 G  161 (329)
Q Consensus       161 G  161 (329)
                      .
T Consensus       345 ~  345 (431)
T 3ht4_A          345 S  345 (431)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=97.51  E-value=6.6e-05  Score=71.61  Aligned_cols=54  Identities=11%  Similarity=-0.087  Sum_probs=36.9

Q ss_pred             ccccceEEehhHhhchhccch---hhhhcc-cCCcch------HHHhhc-CCccccce---eeechhHH
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT---YLGFQC-LQICRF------VQKDFK-GSFWDKLI---VHTSTCTF   59 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~-~GV~PD------i~KaLg-GG~~PigA---v~~~~eI~   59 (329)
                      ..||+++|.||+..+|+..+.   .+.... .+..++      ++|.++ .| +.+|.   +.+++++.
T Consensus       213 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~riG~~~~v~~~~~~~  280 (409)
T 4eu1_A          213 KRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYG-HRCGALHISTASAEEA  280 (409)
T ss_dssp             HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGG-GCCEEEEEECSSHHHH
T ss_pred             HhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCcc-CCceEEEEEeCCHHHH
Confidence            467999999999999977652   223322 355566      469997 56 48888   46677733

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=97.49  E-value=0.00018  Score=70.60  Aligned_cols=160  Identities=9%  Similarity=-0.065  Sum_probs=83.2

Q ss_pred             ccccceEEehhHhhchhc-cchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHH--hhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGD-NGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFE--NFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR-TG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d--~~~~~~~~~~~~~~hg   76 (329)
                      ..||+++|+||++++..+ .|..+....+|  +|     +.|.++|+. ++|++++++++.+  .+... ...   +..+
T Consensus       172 ~~~~~~livDea~~~~~~f~~~~~~~~~~g--~Di~~~S~~K~l~~~~-g~g~l~~~~~~i~~~~~~~~-~~~---~~~~  244 (446)
T 2x3l_A          172 HQLNIPVLIDEAHGAHFGLQGFPDSTLNYQ--ADYVVQSFHKTLPALT-MGSVLYIHKNAPYRENIIEY-LSY---FQTS  244 (446)
T ss_dssp             HHTTCCEEEECTTCTTTTSTTSCCCGGGGT--CSEEEECHHHHSSSCT-TCEEEEEETTCTTHHHHHHH-HHH---HSCS
T ss_pred             HhcCCeEEEcchhhhhhccCCCCCChHHcC--CCEEEECCcccccccc-ccEEEEEcCCcCCHHHHHHH-HHH---HcCC
Confidence            357999999999987222 22211222233  68     459988774 7899999888654  22210 000   1111


Q ss_pred             h-hhhccHHHHHHHHhhHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          77 L-KISDTVRPHVQIKKSVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        77 ~-T~agnlA~aaala~~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      + .+....++.+++  +.+++      .++..++.+++++.      ....+..  ..+..+.+.+. +      .   .
T Consensus       245 s~~~~~~aal~~a~--~~l~~~g~~~~~~~~~~l~~~l~~~------g~~~~~~--~~~~~l~i~~~-~------~---~  304 (446)
T 2x3l_A          245 SPSYLIMASLESAA--QFYKTYDSTLFFAKRAQLIECLENK------GFEMLQV--DDPLKLLIKYE-G------F---T  304 (446)
T ss_dssp             SCCHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHH------TCEEEEC--SSTTEEEEECT-T------S---C
T ss_pred             CchHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHc------CCEECcC--CCCeEEEEEeC-C------c---C
Confidence            1 111112222222  22221      44555655555554      1111110  01223344432 1      0   1


Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|.++||.+..++  .+.+|+.+++..+   ++|+ ++++++
T Consensus       305 ~~~l~~~L~~~GI~v~~~g--~~~iRi~~~~~~t---~e~i-~l~~aL  346 (446)
T 2x3l_A          305 GHDIQNWFMNAHIYLELAD--DYQALAILPLWHH---DDTY-LFDSLL  346 (446)
T ss_dssp             HHHHHHHHHHTTEEESEEC--SSCEEEECCCCCT---TCCC-CHHHHH
T ss_pred             HHHHHHHHHHCCCEEEecC--CCEEEEEeecCCC---HHHH-HHHHHH
Confidence            3457888999999997444  4689999987664   4667 777653

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=97.46  E-value=0.00018  Score=68.52  Aligned_cols=175  Identities=10%  Similarity=0.013  Sum_probs=83.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ..||+++|.||++.-+ ..|...........+|     ++|.++|  ..+|.+++++++++.+..  ..    ...+  .
T Consensus       169 ~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~di~~~S~sK~l~g--~~~G~~~~~~~~~~~l~~--~~----~~~~--~  237 (374)
T 2aeu_A          169 KNKEAIVFVDDASGAR-VRLLFNQPPALKLGADLVVTSTDKLMEG--PRGGLLAGKKELVDKIYI--EG----TKFG--L  237 (374)
T ss_dssp             HHHTCCEEEECTTHHH-HHHHTTCCCHHHHTCSEEEEETTSSSSS--CSCEEEEEEHHHHHHHHH--HH----HTTT--C
T ss_pred             HHcCCEEEEECCcccc-cccccccCCccccCCcEEEecCcccccC--cceEEEEECHHHHHHHHH--hh----cccc--C
Confidence            4579999999965433 2111110001123467     4699875  378999999999887653  11    0011  1


Q ss_pred             hcc-HHHHHHHHh-hHHh--HHHHHHHHHHHH----HHHHHHHHHhC----CceeeEEeeceeeEEEeecCCCCCCCCCh
Q psy7882          80 SDT-VRPHVQIKK-SVLE--RFVHTYVVGNFL----LTHLSKLREEF----AIVGDVRGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        80 agn-lA~aaala~-~ile--~le~v~~lG~~L----~~gL~eL~~~~----p~v~~VRG~GLm~gIef~~d~~~~~p~~~  147 (329)
                      +.+ ++++++.+. +.++  ++++..+....+    ++.|++.....    +.....+..|.++... ....    ..+.
T Consensus       238 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~-~~~~----~~~~  312 (374)
T 2aeu_A          238 EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRV-YKDD----TINI  312 (374)
T ss_dssp             BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEE-ESSH----HHHH
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEee-cccc----cccc
Confidence            223 333333333 2221  122333333333    34444432221    2222345667665442 1100    0000


Q ss_pred             HHHHHHH-HHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHIL-DSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~-~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+. ..+.++||++.++..   ..+.+||.++-..  .++.+++++++++
T Consensus       313 ~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~--~~~~~l~~l~~~l  364 (374)
T 2aeu_A          313 KKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRD--AERIDDNYIIKAI  364 (374)
T ss_dssp             HHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGG--GGGSCHHHHHHHH
T ss_pred             cchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCch--HHHHHHHHHHHHH
Confidence            0112244 444578999987521   2457999865311  1233477777764

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=97.46  E-value=0.00062  Score=64.37  Aligned_cols=144  Identities=8%  Similarity=0.071  Sum_probs=78.6

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch---HH----HhhcCCccccceeeech-hHHHhhhhhh-hcc-C---
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF---VQ----KDFKGSFWDKLIVHTST-CTFENFIKIK-YQI-L---   70 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD---i~----KaLgGG~~PigAv~~~~-eI~d~~~~~~-~~~-~---   70 (329)
                      ..+|+++|.||+|+ |...     ..+.+|+.+|   ++    |.+++|  ..|++++++ ++.+.+.... .+. .   
T Consensus       152 ~~~~~~li~D~a~~~g~~~-----~~~~~g~~~~~~~~s~~~~k~~~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~  224 (390)
T 3b8x_A          152 GGRDIILLEDNCESMGATF-----NNKCAGTFGLMGTFSSFYSNHIATM--EGGCIVTDDEEIYHILLCIRAHGWTRNLP  224 (390)
T ss_dssp             TTSCCEEEEECTTCTTCEE-----TTEETTSSSSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTBSTTSC
T ss_pred             HHcCCEEEEECcCcccCEE-----CCcccccccceEEEEccCCCCCccC--CceEEEeCCHHHHHHHHHHHhcCCCcccc
Confidence            46799999999998 4432     2356788777   33    555443  236666665 5655443200 010 0   


Q ss_pred             ---------------CCC---ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCcee--e--EE
Q psy7882          71 ---------------KTP---AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVG--D--VR  125 (329)
Q Consensus        71 ---------------~~~---~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~--~--VR  125 (329)
                                     ..+   ..|.++..+ ++++++++. +.+++ .++.+++.+++.+.|+++    |.+.  .  .+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~  300 (390)
T 3b8x_A          225 KKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLPRFISVRRKNAEYFLDKFKDH----PYLDVQQETGE  300 (390)
T ss_dssp             SEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----SSEEECCCCSB
T ss_pred             ccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCcccCCCCCC
Confidence                           000   012333355 777777666 55555 667777788887777643    3211  0  11


Q ss_pred             eeceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeec
Q psy7882         126 GKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       126 G~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~  166 (329)
                      ....++.|.+..+.+       .....+.+.|.++||.+++
T Consensus       301 ~~~~~~~i~~~~~~~-------~~~~~l~~~L~~~gI~v~~  334 (390)
T 3b8x_A          301 SSWFGFSFIIKKDSG-------VIRKQLVENLNSAGIECRP  334 (390)
T ss_dssp             CCCCEEEEEECTTSC-------CCHHHHHHHHHHTTBCCBC
T ss_pred             cccEEEEEEecCcCc-------ccHHHHHHHHHHCCCCeee
Confidence            222334555532100       0134678888899998875

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=97.46  E-value=0.0004  Score=66.79  Aligned_cols=51  Identities=16%  Similarity=-0.005  Sum_probs=36.2

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeec-hhHHHhhhh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTS-TCTFENFIK   64 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~-~eI~d~~~~   64 (329)
                      |+++|+||+|+++.+. ..+.   +|  +|     +.|.+++...++ |+++++ +++.+.+..
T Consensus       172 ~~~livD~a~~~~~~~-~~~~---~~--~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~  229 (393)
T 1n8p_A          172 DVILVVDNTFLSPYIS-NPLN---FG--ADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQF  229 (393)
T ss_dssp             TCEEEEECTTTHHHHC-CGGG---GT--CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH
T ss_pred             CCEEEEeCCccccccC-CHHH---cC--CeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHH
Confidence            9999999999987653 3322   23  67     469999754578 777775 678776653

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=97.45  E-value=0.00052  Score=63.67  Aligned_cols=172  Identities=8%  Similarity=-0.110  Sum_probs=87.8

Q ss_pred             ccccceEEehhHhhchhc--cchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGD--NGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR--TG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|+||.+..+..  .|.-  ...+.-..|     ++|+++++. . +.+++++++++.+.....     ...+.
T Consensus       168 ~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~-----~~~~~  238 (359)
T 3pj0_A          168 HEQGISLHLDGARLWEITPFYQKS--AEEICALFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKR-----RYGGD  238 (359)
T ss_dssp             HHHTCEEEEEETTCGGGHHHHTCC--HHHHHTTCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHH-----HTTCC
T ss_pred             HHcCCEEEEECcchhcchhhhCCC--HHHhhccCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHH-----HhCCC
Confidence            357999999998653211  1100  000111224     469887652 2 567788888887653000     11122


Q ss_pred             hhhcc-HHHHH--HHHhhHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeE--EeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          78 KISDT-VRPHV--QIKKSVLERFVHTYVVGNFLLTHLSKLREEFAIVGDV--RGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        78 T~agn-lA~aa--ala~~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~V--RG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      ++..+ .++++  +++ +.++.+++..+..+++.+.|+++    +.+.-.  ...+.++.+.+....       ......
T Consensus       239 ~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  306 (359)
T 3pj0_A          239 LISLYPYILSADYYFE-KRIGKMAEYFEAAKGLAERFNSC----SGVKTVPEVPVSNMFHVYFENSA-------DEIGAI  306 (359)
T ss_dssp             CSCCHHHHHHHHHHHH-HHGGGHHHHHHHHHHHHHHHHTS----TTEEEESSSCSSSEEEEEESSCH-------HHHHHH
T ss_pred             cchhHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHhhC----CCceeeccCCcceEEEEEecCcc-------chhHHH
Confidence            33333 22222  222 22233556667777777777653    322111  123444445553210       122456


Q ss_pred             HHHHHHHCCceeeccCC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.|.++||++.+...    ....+|+.--...+..+.+++++.++.+
T Consensus       307 l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l  355 (359)
T 3pj0_A          307 LTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCL  355 (359)
T ss_dssp             HHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred             HHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence            88899999999987521    1234555322112223688999888764

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=97.44  E-value=0.00055  Score=64.46  Aligned_cols=145  Identities=14%  Similarity=0.002  Sum_probs=81.1

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch-----HH--HhhcCCccccceeeechh-H--HHhhhh-hhhcc---
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQ--KDFKGSFWDKLIVHTSTC-T--FENFIK-IKYQI---   69 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~--KaLgGG~~PigAv~~~~e-I--~d~~~~-~~~~~---   69 (329)
                      .++|+++|.||+++ |+...|..  ...++   |     ++  |+++||  ..|+++++++ +  ++.+.. ...+.   
T Consensus       150 ~~~~~~li~D~a~~~g~~~~~~~--~~~~~---~i~~~S~s~~K~l~g~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (388)
T 1b9h_A          150 ADTGVPLLQDAAHAHGARWQGKR--VGELD---SIATFSFQNGKLMTAG--EGGAVVFPDGETEKYETAFLRHSCGRPRD  222 (388)
T ss_dssp             HHHTCCBCEECTTCTTCEETTEE--GGGSS---SCEEEECCTTSSSCSS--SCEEEEECTTCHHHHHHHHHHTBTTCCTT
T ss_pred             HHcCCEEEEecchhcCCccCCee--ccccc---ceEEEEccCCCcccCC--CeEEEEECCHHHHHHHHHHHHHhCCCCcc
Confidence            35799999999998 45444432  22233   5     23  999886  4788888875 6  555432 00000   


Q ss_pred             CCCC---ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-------EeeceeeEEEee
Q psy7882          70 LKTP---AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-------RGKGLMIGVDLV  136 (329)
Q Consensus        70 ~~~~---~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-------RG~GLm~gIef~  136 (329)
                      ...+   ..|.++..+ ++++++.+. +.+++ .++.++..+++.+.|+++    |.+.-+       +..|.++.+.+.
T Consensus       223 ~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  298 (388)
T 1b9h_A          223 DRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTLLSRLLGAI----DGVVPQGGDVRADRNSHYMAMFRIP  298 (388)
T ss_dssp             CSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTS----TTCEECCCCTTCCBCCCSEEEEECT
T ss_pred             CccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCccccCCCcCCCccceEEEEEEeC
Confidence            0001   113334445 555554444 55544 566777777777777653    322111       233667777774


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceeecc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLGRG  167 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~  167 (329)
                      ..       ...-...+.+.|.++||.+.++
T Consensus       299 ~~-------~~~~~~~l~~~L~~~gI~v~~~  322 (388)
T 1b9h_A          299 GL-------TEERRNALVDRLVEAGLPAFAA  322 (388)
T ss_dssp             TC-------CHHHHHHHHHHHHHTTCCEEEC
T ss_pred             Cc-------CcccHHHHHHHHHHCCCCcccc
Confidence            21       0112456888899999999763

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=97.38  E-value=0.00072  Score=62.78  Aligned_cols=174  Identities=9%  Similarity=-0.130  Sum_probs=89.6

Q ss_pred             ccccceEEehhHh-----hchhccchhhhhcccCC-cchHHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           5 YYRDCGVVVSAVD-----FGSGDNGTYLGFQCLQI-CRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVq-----TGfGRTG~~fA~e~~GV-~PDi~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..||+++|+||.+     .++|++...+. +..++ .=.++|+++|..  -|.+++++++++.+.....     ...++.
T Consensus       166 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~--gg~~~~~~~~~~~~~~~~~-----~~~~~~  237 (357)
T 3lws_A          166 RERGIRLHLDGARLFEMLPYYEKTAAEIA-GLFDSIYISFYKGLGGIA--GAILAGPAAFCQTARIWKR-----RYGGDL  237 (357)
T ss_dssp             HHTTCEEEEEETTHHHHHHHHTCCHHHHH-TTSSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHH-----HTTCCC
T ss_pred             HHcCCEEEEECchhhhhhhhcCCChHHHH-hcCCEEEEeccccCCCCc--eEEEEcCHHHHHHHHHHHH-----HhcCCc
Confidence            3679999999864     34555543332 11111 111569986532  2777788888877642000     011122


Q ss_pred             hhccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceee--EEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          79 ISDTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGD--VRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        79 ~agnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~--VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +..+..++++++.  +.++++.+..+..+++.+.|+++    +.+.-  ....+.++.+.+....       ......+.
T Consensus       238 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  306 (357)
T 3lws_A          238 ISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNAL----PGVHTTPEVPVSNMFHLHFDGQA-------ADISPKLE  306 (357)
T ss_dssp             SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS----TTEEEESSSCSSSEEEEEEESCH-------HHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeeccCCCcceEEEEEecCCh-------HHHHHHHH
Confidence            2223212222222  22222445566667777766543    33221  1234556666764310       11245678


Q ss_pred             HHHHHCCceeeccC---CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGG---LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G---~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++.+..   +....+|+.--......+++++++.++.+
T Consensus       307 ~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l  352 (357)
T 3lws_A          307 QVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARL  352 (357)
T ss_dssp             HHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHH
T ss_pred             HHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHH
Confidence            88999999998742   11125555422222223688999988864

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=97.34  E-value=0.0014  Score=65.14  Aligned_cols=186  Identities=15%  Similarity=0.025  Sum_probs=98.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechh--HHHhhhh--hhh--ccCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTC--TFENFIK--IKY--QILKT   72 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~e--I~d~~~~--~~~--~~~~~   72 (329)
                      .++|++||+|+++.|+......+.+...|+ .+|     ..|.+++++ ++|+++++++  +++....  ..+  +....
T Consensus       286 ~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~  364 (515)
T 2jis_A          286 QRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGL-QCSALLLQDTSNLLKRCHGSQASYLFQQDKF  364 (515)
T ss_dssp             HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS-CCEEEEESCCSCHHHHHHCC---------CC
T ss_pred             HHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCC-CeeEEEEeChHHHHHHHhcCCchhccCCccc
Confidence            457999999999999877655444445566 678     259988774 8899999977  6553211  000  00000


Q ss_pred             ---Cccchhh------hcc-HHHHHHHH---hhHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882          73 ---PAHKLKI------SDT-VRPHVQIK---KSVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD  138 (329)
Q Consensus        73 ---~~hg~T~------agn-lA~aaala---~~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d  138 (329)
                         .....++      ... +++.++++   .+-+++ .++..++.++|.+.|+++ ..+..+...+  ...+.+.+.++
T Consensus       365 ~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~g~~~~~~~~--~~~v~f~~~p~  441 (515)
T 2jis_A          365 YDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKR-EGFELVMEPE--FVNVCFWFVPP  441 (515)
T ss_dssp             SCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-TTEEESSCCS--SSEEEEEECCG
T ss_pred             ccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCC--eeEEEEEEeCc
Confidence               0001111      011 22222222   222333 667778888888887664 1111222211  22334433221


Q ss_pred             C--C--CCCCCChH---HHHHHHHHHHHCCceeecc---CCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         139 K--E--TKVPLNSR---HMTHILDSCKEHGLLLGRG---GLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~--~--~~~p~~~~---~~~~~~~~l~e~GVLl~~~---G~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      .  .  ....+...   ....+...+.++|++....   ....+.+|+.+ +...   |++||+.+++++
T Consensus       442 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~---t~edid~~~~~l  508 (515)
T 2jis_A          442 SLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSAL---TCADMDFLLNEL  508 (515)
T ss_dssp             GGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             cccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCC---CHHHHHHHHHHH
Confidence            0  0  00000000   1234677888999765321   11236899988 6655   589999999975

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=97.34  E-value=0.0011  Score=66.67  Aligned_cols=51  Identities=10%  Similarity=-0.093  Sum_probs=34.5

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch---HHHhhc-CCccccceeeechh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFK-GSFWDKLIVHTSTC   57 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLg-GG~~PigAv~~~~e   57 (329)
                      .+|+++|.||++.+|...+.-......+....   ++|.++ .| +++|.++++++
T Consensus       276 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~  330 (533)
T 3f6t_A          276 NPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTG-WRLGVIALNEK  330 (533)
T ss_dssp             CTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGG-GCEEEEEEESS
T ss_pred             CCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcc-cceEEEEECcH
Confidence            47999999999999865432222211122222   679997 67 49999998876

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=97.32  E-value=0.001  Score=65.77  Aligned_cols=184  Identities=10%  Similarity=-0.064  Sum_probs=96.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeech-hHHHhhhhhhhccCCCCc-cc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTST-CTFENFIKIKYQILKTPA-HK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~-eI~d~~~~~~~~~~~~~~-hg   76 (329)
                      ..||+++++|+++.|+.....-+.....|+ .+|     ..|.+++.+ ++|++++++ ++++..... ..   .+. ++
T Consensus       272 ~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~-~~g~l~~~~~~~~~~~~~~-~~---~~l~~~  346 (504)
T 2okj_A          272 EKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL-QCSAILVKEKGILQGCNQM-CA---GYLFQP  346 (504)
T ss_dssp             HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS-CCEEEEESSTTHHHHHHCC-CC---SSSCCS
T ss_pred             HHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc-ceEEEEEECHHHHHHHhcC-CC---ccccCC
Confidence            457999999999998865433222333455 567     239888774 899999987 466532210 00   011 11


Q ss_pred             h----------hh------hcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEe
Q psy7882          77 L----------KI------SDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDL  135 (329)
Q Consensus        77 ~----------T~------agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef  135 (329)
                      .          ++      ..+ +++.++++.   +-+++ .++..++.++|.+.|+++ ..+..+......+.++.+.+
T Consensus       347 ~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~~p~~~~v~f~~  425 (504)
T 2okj_A          347 DKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR-EEFEMVFNGEPEHTNVCFWY  425 (504)
T ss_dssp             CCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTEEESSSSCCSSSCEEEEE
T ss_pred             cccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEecCCCCeEEEEEEE
Confidence            0          00      112 333333332   22333 667777778887777653 11111111012344455554


Q ss_pred             ecCCCCC--CC--CC---hHHHHHHHHHHHHCCcee-eccCCCC--CEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882         136 VQDKETK--VP--LN---SRHMTHILDSCKEHGLLL-GRGGLSG--NTLTALQP-KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       136 ~~d~~~~--~p--~~---~~~~~~~~~~l~e~GVLl-~~~G~~~--nvIrl~PP-L~It~~t~eeId~~l~~~  197 (329)
                      .+.....  ..  +.   ......+.+.|.++|+++ .+....+  +.+|+.+. ...   |++||+.+++++
T Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~---t~edi~~~~~~l  495 (504)
T 2okj_A          426 IPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAA---TQSDIDFLIEEI  495 (504)
T ss_dssp             CCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTC---CHHHHHHHHHHH
T ss_pred             eCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCC---CHHHHHHHHHHH
Confidence            3211000  00  00   012456888899999643 3211112  57998874 333   689999999975

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=97.26  E-value=0.0011  Score=65.51  Aligned_cols=53  Identities=8%  Similarity=-0.140  Sum_probs=37.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCc-cccceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSF-WDKLIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~-~PigAv~~~~eI~d~~~   63 (329)
                      ..+|+++|+||+++..    ..  +......+|     +.|.++|+. +++|++++++++++.+.
T Consensus       227 ~~~g~~livD~a~~~~----~~--~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~  285 (445)
T 1qgn_A          227 HEKGALVCIDGTFATP----LN--QKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIR  285 (445)
T ss_dssp             HHTTCEEEEECTTTCT----TT--CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHH
T ss_pred             HHcCCEEEEECCCccc----cc--CCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHH
Confidence            3579999999999732    11  223345578     359998763 36899999999887765

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=97.19  E-value=0.0032  Score=58.11  Aligned_cols=164  Identities=9%  Similarity=-0.074  Sum_probs=83.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccC-CCCccchh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL-KTPAHKLK   78 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~-~~~~hg~T   78 (329)
                      ..||+ +|.||+++. |..  .+..+.++  +|     +.|.+ |+ .++|+++++++.  .+.+...+.. ......+ 
T Consensus       165 ~~~~~-li~D~a~~~-~~~--~~~~~~~~--~d~~~~s~~K~~-g~-~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~-  233 (382)
T 4hvk_A          165 AGKAA-LHIDATASV-GQI--EVDVEKIG--ADMLTISSNDIY-GP-KGVGALWIRKEA--KLQPVILGGGQENGLRSG-  233 (382)
T ss_dssp             SSSSE-EEEECTTTB-TTB--CCCHHHHT--CSEEEEESGGGT-SC-TTCEEEEEETTC--CCCCSSCSSCTGGGTSCS-
T ss_pred             HHcCE-EEEEhHHhc-CCC--CCCchhcC--CCEEEEeHHHhc-CC-CceEEEEEcCcc--CcCcccccCCCcCccccC-
Confidence            46799 999999873 221  11222222  46     45953 33 258888888764  1111000000 0000111 


Q ss_pred             hhcc-HHH---HHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE----EeeceeeEEEeecCCCCCCCCCh
Q psy7882          79 ISDT-VRP---HVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV----RGKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        79 ~agn-lA~---aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V----RG~GLm~gIef~~d~~~~~p~~~  147 (329)
                       +.+ .++   .+++..  +.+++ .++.+++.++|.+.|++    .|.+.-.    .+.+.++.+.+.. .      + 
T Consensus       234 -~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~-~------~-  300 (382)
T 4hvk_A          234 -SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK----IEESYLNGHPEKRLPNNVNVRFSY-I------E-  300 (382)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----STTEEECSCSSSBCTTEEEEEETT-C------C-
T ss_pred             -CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCccccCCCEEEEEECC-C------C-
Confidence             122 222   223221  22222 45566666666666653    3322111    1123355555531 1      1 


Q ss_pred             HHHHHHHHHHHHCCceeeccCC---C------------------CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGL---S------------------GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~---~------------------~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                        ...+.+.|.++||++.+...   .                  .+.+|+.+....   +++|++++++++
T Consensus       301 --~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~---t~e~i~~~~~~l  366 (382)
T 4hvk_A          301 --GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYN---TDEDVDRLLEVL  366 (382)
T ss_dssp             --HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCC---CHHHHHHHHHHH
Confidence              34578888999999876320   0                  478999887665   589999999985

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=97.15  E-value=0.0031  Score=60.24  Aligned_cols=52  Identities=13%  Similarity=-0.029  Sum_probs=35.8

Q ss_pred             ccccceEEehhHhhchhc-cchhhhhcccCCcch-----H--HHhhcCCccccceeeec-hhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGD-NGTYLGFQCLQICRF-----V--QKDFKGSFWDKLIVHTS-TCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR-TG~~fA~e~~GV~PD-----i--~KaLgGG~~PigAv~~~-~eI~d~~~   63 (329)
                      ..+|+++|.||+++.+.+ .|.     ..+..+|     +  +|.+++|  ..|.++++ +++.+.+.
T Consensus       154 ~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~~~s~s~~K~~~~g--~~g~~~~~~~~l~~~~~  214 (418)
T 2c81_A          154 QEHNLFVIEDCAQSHGSVWNNQ-----RAGTIGDIGAFSCQQGKVLTAG--EGGIIVTKNPRLFELIQ  214 (418)
T ss_dssp             HHTTCEEEEECTTCTTCEETTE-----ETTSSSSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHH
T ss_pred             HHCCCEEEEECcccccCccCCE-----ecccccceEEEeccCCcccCCC--CeEEEEECCHHHHHHHH
Confidence            357999999999997753 222     2333345     3  6999886  67888884 67776654

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=97.14  E-value=0.0015  Score=62.42  Aligned_cols=159  Identities=12%  Similarity=0.002  Sum_probs=86.2

Q ss_pred             ceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccc------
Q psy7882           9 CGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHK------   76 (329)
Q Consensus         9 iLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg------   76 (329)
                      +++|+||++ ++|++.  +...  ...+|     ++|.+  |. .+|++++++++ ...+.+        ..++      
T Consensus       216 ~~livDea~-~~~~~~--~~~~--~~~~d~~~~s~~K~~--g~-~~G~~~~~~~~~~~~~~~--------~~~~~~~~~~  279 (432)
T 3a9z_A          216 VLVHTDAAQ-ALGKRR--VDVE--DLGVDFLTIVGHKFY--GP-RIGALYVRGVGKLTPLYP--------MLFGGGQERN  279 (432)
T ss_dssp             CEEEEECTT-TTTTSC--CCHH--HHCCSEEEEEGGGTT--CC-SCEEEEETTBTTTBCCCC--------SCCSSCGGGG
T ss_pred             eEEEEEchh-hhCCcc--cChh--hcCCCEEEEehhHhc--CC-cceEEEEccccccCCcCc--------eeecCCcccc
Confidence            999999999 565542  1111  23477     46965  43 48999998775 222211        1111      


Q ss_pred             -hhhhcc-HHHHH---HHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCce--e---eEEeeceeeEEEeecCCCCCC
Q psy7882          77 -LKISDT-VRPHV---QIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIV--G---DVRGKGLMIGVDLVQDKETKV  143 (329)
Q Consensus        77 -~T~agn-lA~aa---ala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v--~---~VRG~GLm~gIef~~d~~~~~  143 (329)
                       .+++.+ .++++   +++.  +.+++ .++++++.++|.+.|+++.. ....  .   ..+..|.+..+.+....    
T Consensus       280 ~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~----  354 (432)
T 3a9z_A          280 FRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG-KRIHLNSRFPGVERLPNTCNFSIQGSQ----  354 (432)
T ss_dssp             TSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-GGEEESSCCTTCCBCTTEEEEEECSTT----
T ss_pred             ccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC-CcEEEeCCCCcccCCCCEEEEEeCCCC----
Confidence             112334 33333   3332  22233 67788888889888887532 1111  1   12355778888875311    


Q ss_pred             CCChHHHHHHHHHHHHCCceeecc------------------CC----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         144 PLNSRHMTHILDSCKEHGLLLGRG------------------GL----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       144 p~~~~~~~~~~~~l~e~GVLl~~~------------------G~----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .+   ...+...+  .|+++...                  |.    ..+.+|+.++...   |++|++++++++
T Consensus       355 -~~---~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~---t~eei~~~~~~l  421 (432)
T 3a9z_A          355 -LR---GYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRST---TRAEVDLIVQDL  421 (432)
T ss_dssp             -CC---HHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             -Cc---HHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCC---CHHHHHHHHHHH
Confidence             01   12233332  23333210                  11    1378999998766   589999999985

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=97.06  E-value=0.0049  Score=57.16  Aligned_cols=162  Identities=10%  Similarity=-0.069  Sum_probs=86.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhH-HHhhhhhhhccCCCCccch-
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCT-FENFIKIKYQILKTPAHKL-   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI-~d~~~~~~~~~~~~~~hg~-   77 (329)
                      ..||++ |.||++. +|...  +....+  .+|     +.|.  .|...+|+++++++. +.....   +. . ..... 
T Consensus       165 ~~~~~~-i~D~a~~-~g~~~--~~~~~~--~~di~~~s~sK~--~g~~g~G~~~~~~~~~l~~~~~---~~-~-~~~~~~  231 (382)
T 4eb5_A          165 AGKAAL-HIDATAS-VGQIE--VDVEKI--GADMLTISSNDI--YGPKGVGALWIRKEAKLQPVIL---GG-G-QENGLR  231 (382)
T ss_dssp             TTSSEE-EEECTTT-BTTBC--CCHHHH--TCSEEEEETGGG--TCCSSCEEEEEETTCCCCCSSC---SS-C-TGGGTS
T ss_pred             HHCCCE-EEEcchh-cCCcc--cCcccc--CCCEEEeehHHh--cCCCceEEEEEccccccCceec---CC-C-cccccc
Confidence            457999 9999997 54321  112222  357     4596  332237888888763 111100   00 0 00011 


Q ss_pred             hhhcc-HHH---HHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-----eceeeEEEeecCCCCCCCC
Q psy7882          78 KISDT-VRP---HVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-----KGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        78 T~agn-lA~---aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-----~GLm~gIef~~d~~~~~p~  145 (329)
                      ..+.+ .++   .++++.  +-+++ .++.+++.+++.+.|++    .|.+ .+.+     .|.++.+.+. +.      
T Consensus       232 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~~~~~~~~~~~~~~~~~-~~------  299 (382)
T 4eb5_A          232 SGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK----IEES-YLNGHPEKRLPNNVNVRFS-YI------  299 (382)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----STTE-EECSCSSSBCTTEEEEEET-TS------
T ss_pred             CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh----CCCe-EEeCCcccCCCCEEEEEeC-Cc------
Confidence            11122 222   223322  11222 45666666667666654    3322 1221     2556667663 11      


Q ss_pred             ChHHHHHHHHHHHHCCceeeccCC---------------------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKEHGLLLGRGGL---------------------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e~GVLl~~~G~---------------------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +   ...+.+.|.++||++.+...                     ..+.+|+.+....   +++|++++++++
T Consensus       300 ~---~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~---~~~~i~~~~~~l  366 (382)
T 4eb5_A          300 E---GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYN---TDEDVDRLLEVL  366 (382)
T ss_dssp             C---HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             C---HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCC---CHHHHHHHHHHH
Confidence            1   24577888899999876321                     1478999977655   589999999985

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=97.04  E-value=0.0014  Score=61.49  Aligned_cols=167  Identities=13%  Similarity=-0.023  Sum_probs=73.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceee-echh-HH---HhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVH-TSTC-TF---ENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~-~~~e-I~---d~~~~~~~~~~~~~~   74 (329)
                      .++|+++|.||+++ +|..    ....... +|     +.| +.|+ .++|+++ ++++ +.   ..+.+.....  ...
T Consensus       186 ~~~~~~li~D~a~~-~~~~----~~~~~~~-~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~  255 (400)
T 3vax_A          186 RATPTYLHVDAAQG-YGKV----PGDLTTP-IDMISISGHK-IGAP-KGVGALVTRRREEMDDERVPLEPIMFGG--GQE  255 (400)
T ss_dssp             TTSSCEEEEECTTT-TTTS----GGGGGSC-CSEEEEETGG-GTSC-SSCEEEEECBCSSSTTCBCCCCCSSCSS--CTG
T ss_pred             HhcCCEEEEEhhhh-cCCC----CcChhhc-CcEEEEeHHH-hCCC-CceEEEEEecchhccccccccCceecCC--Cce
Confidence            46799999999997 3322    1222233 88     459 5444 3688888 7762 11   1111100000  000


Q ss_pred             cch-hhhcc-HHHHHHHHh-hHH----hH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecCCCCCCCC
Q psy7882          75 HKL-KISDT-VRPHVQIKK-SVL----ER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        75 hg~-T~agn-lA~aaala~-~il----e~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d~~~~~p~  145 (329)
                      .+. +.+.+ .++++..+. +.+    ++ .++.+++.++|.+.|+ + ......... .+.+.++.+.+.. .      
T Consensus       256 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~-~~~~~~~~~~~~~~~~~~~~~~~-~------  326 (400)
T 3vax_A          256 RKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-S-TSFQVNGDQDHVVPHILNLSFED-V------  326 (400)
T ss_dssp             GGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-T-TTCEECSCTTSBCTTEEEEECTT-C------
T ss_pred             eeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-C-CCEEEeCCcccCCCCEEEEEeCC-C------
Confidence            011 11123 222222222 222    22 5566677777777665 2 111111111 1234466665531 1      


Q ss_pred             ChHHHHHHHHHHHHCCceeeccC-----------------CC----CCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKEHGLLLGRGG-----------------LS----GNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e~GVLl~~~G-----------------~~----~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      +   ...+.+.|. +||++.+..                 ..    .+.+||.+ +...   +++|++++++++
T Consensus       327 ~---~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~---t~e~i~~~~~~l  393 (400)
T 3vax_A          327 D---AEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQA---TDLDVEELARGV  393 (400)
T ss_dssp             C---HHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-----------------
T ss_pred             C---HHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCC---CHHHHHHHHHHH
Confidence            1   345777777 898876521                 00    38899998 7766   478999999875

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=96.90  E-value=0.018  Score=56.24  Aligned_cols=167  Identities=7%  Similarity=-0.136  Sum_probs=91.5

Q ss_pred             ccccceEEehhHhhchhccchh-hhhcc-cCCcch-----HHHhhcCCccccceeeec-hhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTY-LGFQC-LQICRF-----VQKDFKGSFWDKLIVHTS-TCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~-fA~e~-~GV~PD-----i~KaLgGG~~PigAv~~~-~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ..+|+++|+||...++.. |.. ..... .+ .+|     ..|.++++ ..+|+++++ +++.+.+.+        ...|
T Consensus       258 ~~~g~~v~vD~A~~~~~~-g~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~--------~~~g  326 (456)
T 2z67_A          258 ENYDIPHIINGAYAIQNN-YYLEKLKKAFKY-RVDAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISL--------SYPG  326 (456)
T ss_dssp             HHHTCCEEEECTTTTTCH-HHHHHHHHHHTS-CCSEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHT--------TSCS
T ss_pred             HHcCCcEEEECcchHHHH-HhhHHHHHhhCC-CCCEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCc--------CCCC
Confidence            357999999988665522 210 11111 12 577     35987776 378999994 667666542        1122


Q ss_pred             hhhhc-cHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          77 LKISD-TVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        77 ~T~ag-nlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .+... .++..+++..   +-+++ .++..++.++|.++|+++...++. +....   .++.+.+..+.         ..
T Consensus       327 ~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~---~~v~~~~~~~~---------~~  394 (456)
T 2z67_A          327 RASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE---SPIASCISVNS---------DP  394 (456)
T ss_dssp             CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC---CSSEEEEECSS---------CH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC---CeEEEEEeccc---------HH
Confidence            21111 1333333322   22333 678889999999999887433231 11111   34455553111         02


Q ss_pred             HHHHHHHHHCCce-eecc------------CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLL-LGRG------------GLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVL-l~~~------------G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|.++|+. ++..            ......+|+...+-.   |++|||++++++
T Consensus       395 ~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~---t~eeid~~l~~L  451 (456)
T 2z67_A          395 VEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGV---RTEDIVNSVSKL  451 (456)
T ss_dssp             HHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCC---CHHHHHHHHHHH
Confidence            4577788888852 1111            011356777765544   689999999975

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=96.68  E-value=0.0012  Score=64.22  Aligned_cols=47  Identities=6%  Similarity=-0.104  Sum_probs=31.3

Q ss_pred             ccccceEEehhHhhchhccch---hhhhccc-CCcch------HHHhhc-CCcccccee
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCL-QICRF------VQKDFK-GSFWDKLIV   52 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~-GV~PD------i~KaLg-GG~~PigAv   52 (329)
                      ..||+++|+||+..+|+..+.   .+....+ +..++      ++|.++ .| +.+|.+
T Consensus       232 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l  289 (448)
T 3meb_A          232 KEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYG-ERIGCL  289 (448)
T ss_dssp             HHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCCEEE
T ss_pred             HHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcc-ccceee
Confidence            357999999999999977651   2333322 22344      569987 56 488886

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=96.61  E-value=0.028  Score=52.13  Aligned_cols=168  Identities=11%  Similarity=-0.020  Sum_probs=86.1

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCC--C-cc-ch
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT--P-AH-KL   77 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~--~-~h-g~   77 (329)
                      +|+++|+||++. +|-.  ......+    |     ..|.++.  .-+|.+.+++++.+.+.+........  . .+ ..
T Consensus       166 ~~~~vivD~a~~-~~~~--~~~~~~~----d~~~~s~~K~~g~--~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  236 (362)
T 2c0r_A          166 GSVPLIGDMSSD-ILSR--PFDLNQF----GLVYAGAQKNLGP--SGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSL  236 (362)
T ss_dssp             TTSCEEEECTTT-TTSS--CCCGGGC----SEEEEETTTTTCC--SSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTC
T ss_pred             CCCEEEEEChhh-ccCC--ccchhHC----cEEEEeccccccC--cCcEEEEEcHHHHhhccccCchHHhHHHHhhccCc
Confidence            789999999986 3211  1111111    6     4598852  12688888988765543100000000  0 00 00


Q ss_pred             hhhcc----HHHHHHHHh--h--HHhH-HHHHHHHHHHHHHHHHHHHHhC-Cceee--EEeeceeeEEEeecCCCCCCCC
Q psy7882          78 KISDT----VRPHVQIKK--S--VLER-FVHTYVVGNFLLTHLSKLREEF-AIVGD--VRGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        78 T~agn----lA~aaala~--~--ile~-le~v~~lG~~L~~gL~eL~~~~-p~v~~--VRG~GLm~gIef~~d~~~~~p~  145 (329)
                      .++.+    .++.++++.  +  -+++ .++.+++.++|.++|+++- .. +....  .+ .+.++.+.+..        
T Consensus       237 ~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~-~~~~~~~~~~~--------  306 (362)
T 2c0r_A          237 YNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG-GFYRGCVDVDSR-SDMNITFRLAS--------  306 (362)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST-TSSEESSCGGGB-CSSEEEEECSC--------
T ss_pred             CCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC-CccccCCChHHc-CCcEEEEEcCC--------
Confidence            11222    333444432  1  2333 5566677777777766531 01 11110  11 23344444421        


Q ss_pred             ChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ......+.+.|.++||.+.+.....+.+|+.....   ++++|++++++++
T Consensus       307 -~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~---~~~e~i~~l~~~l  354 (362)
T 2c0r_A          307 -EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNA---VPYESCEALVQFM  354 (362)
T ss_dssp             -HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTT---SCHHHHHHHHHHH
T ss_pred             -cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCC---CCHHHHHHHHHHH
Confidence             12345678888999998765322235699986432   3689999999985

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=96.54  E-value=0.004  Score=61.78  Aligned_cols=178  Identities=9%  Similarity=-0.037  Sum_probs=86.7

Q ss_pred             ccccceEEehhHhhchhccch--hhhh----cccCC-cch--------HHHhhc--CCccccceeee---chhHHHhhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT--YLGF----QCLQI-CRF--------VQKDFK--GSFWDKLIVHT---STCTFENFIK   64 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~--~fA~----e~~GV-~PD--------i~KaLg--GG~~PigAv~~---~~eI~d~~~~   64 (329)
                      ..||+++|+||+..++...+.  ...+    ..+|. ..|        ++|++.  .| +.+|.+++   ++++.+.+..
T Consensus       267 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~  345 (500)
T 3tcm_A          267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYK  345 (500)
T ss_dssp             HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHH
T ss_pred             HHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHH
Confidence            457999999999988644321  1111    12222 222        469984  36 48888887   8888887653


Q ss_pred             hhhccCCCCccchhhhccHHHHHHHHh-h--------HHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceee
Q psy7882          65 IKYQILKTPAHKLKISDTVRPHVQIKK-S--------VLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMI  131 (329)
Q Consensus        65 ~~~~~~~~~~hg~T~agnlA~aaala~-~--------ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~  131 (329)
                        ...  ....+++.+. .+++.++.. +        ..+.    .+++++..++|.+.|++    .|.+.-+...|.|+
T Consensus       346 --~~~--~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~~g~~~~~~~g~~~  416 (500)
T 3tcm_A          346 --IAS--VNLCSNITGQ-ILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK----LEGITCNEAEGAMY  416 (500)
T ss_dssp             --HHH--TTCCCCHHHH-HHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----STTEECCCCCBTTE
T ss_pred             --HHh--cccCCCHHHH-HHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEecCCeEEE
Confidence              110  0111111111 223333321 0        1111    34455555556555554    34333333344333


Q ss_pred             E-EEeecCCCCCC---CCChHHHHH-HHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         132 G-VDLVQDKETKV---PLNSRHMTH-ILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       132 g-Ief~~d~~~~~---p~~~~~~~~-~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      . +.+..+.....   .....-... +...+.++||++.+..     ...+.+|+...  .   ++++|+++++++
T Consensus       417 ~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~---~~e~i~~~i~~l  487 (500)
T 3tcm_A          417 VFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--P---QEDKIPAVISRF  487 (500)
T ss_dssp             ECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--S---CTTTHHHHHHHH
T ss_pred             EeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--C---CHHHHHHHHHHH
Confidence            2 22321100000   000000122 2355667899998742     12357888754  2   567899998875

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=96.10  E-value=0.08  Score=50.28  Aligned_cols=153  Identities=8%  Similarity=-0.045  Sum_probs=81.9

Q ss_pred             cceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeee-chhHHHhhhhhhhccCCCCccchh
Q psy7882           8 DCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHT-STCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         8 giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~-~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ++++|.||++.. +   ......   ..+|       ++|.++ .| +-+|.+++ ++++.+.+..  .      ....+
T Consensus       185 ~~~ii~De~y~~-~---~~~~l~---~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~--~------~~~~~  248 (391)
T 3bwn_A          185 EAKVIHDFAYYW-P---HYTPIT---RRQDHDIMLFTFSKITGHAG-SRIGWALVKDKEVAKKMVE--Y------IIVNS  248 (391)
T ss_dssp             CCEEEEECTTCS-T---TTSCCC---CCBCCSEEEEEHHHHHSCGG-GCEEEEEECCHHHHHHHHH--H------HHHHH
T ss_pred             CCEEEEeCCCCC-C---CCCccc---cCCCCeEEEEechhhcCCCc-cceEEEEecCHHHHHHHHH--H------hcccc
Confidence            399999999963 2   111111   1233       679986 56 47788886 8888877653  1      01112


Q ss_pred             hhcc----HHHHHHHHh-h-----------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceee--------------EEee
Q psy7882          79 ISDT----VRPHVQIKK-S-----------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGD--------------VRGK  127 (329)
Q Consensus        79 ~agn----lA~aaala~-~-----------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~--------------VRG~  127 (329)
                      ++.+    .+++++++. .           .+++ .++.++.-+++.+.|++    +|.+.-              +...
T Consensus       249 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~~~~~~f~~~~~~~~  324 (391)
T 3bwn_A          249 IGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKE----SDAFTLPKYPEAFCNYFGKSLESY  324 (391)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHT----CSSEECCCCCCEEETTTTEEECCC
T ss_pred             cCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccccCCccccccccccCCCc
Confidence            2223    233444443 1           1222 23344444444444443    332110              0122


Q ss_pred             ceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         128 GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       128 GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      |+++.+.+..+            ..+...+.++||.+.++..   ..+.+||.-.  .   ++++++++++++
T Consensus       325 g~~~~~~~~~~------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~---~~e~i~~~~~~L  380 (391)
T 3bwn_A          325 PAFAWLGTKEE------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--S---REDVFNVFLERL  380 (391)
T ss_dssp             CSEEEEEESSS------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--S---CHHHHHHHHHHH
T ss_pred             ceEEEecCCcH------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence            44555666321            1255667789999988422   2467888754  1   578899999874

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=96.00  E-value=0.0049  Score=58.12  Aligned_cols=53  Identities=6%  Similarity=-0.145  Sum_probs=33.5

Q ss_pred             ccccceEEehhHhhchhccch---hhhhccc-CCcch------HHHhhc-CCccccceeee---chhH
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCL-QICRF------VQKDFK-GSFWDKLIVHT---STCT   58 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~~---~~eI   58 (329)
                      ..||+++|.||+..+|+..+.   .++...+ +..++      ++|.++ .| +.+|.+++   +++.
T Consensus       205 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~RiG~l~~~~~~~~~  271 (401)
T 7aat_A          205 KKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG-ERAGAFTVICRDAEE  271 (401)
T ss_dssp             HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG-GCEEEEEEECSSHHH
T ss_pred             HhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccccc-CceEEEEEEeCCHHH
Confidence            357999999999998876542   2233222 22233      569987 55 47887665   5553

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=95.92  E-value=0.018  Score=56.36  Aligned_cols=46  Identities=15%  Similarity=-0.138  Sum_probs=28.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeee
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHT   54 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~   54 (329)
                      ..+|+++|+||++.    +|.++....+|+...   +.|.++|.-..+|++++
T Consensus       194 ~~~g~~livD~a~~----~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv  242 (430)
T 3ri6_A          194 HAKGIPLVVDTTMT----PPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLI  242 (430)
T ss_dssp             HTTTCCEEEECTTS----CTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred             HHcCCEEEEECCCc----ccccCChHHcCCEEEEECCcccccCCCCceEEEEE
Confidence            46799999999986    333333334554322   45999885334554444

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=95.90  E-value=0.06  Score=52.09  Aligned_cols=168  Identities=10%  Similarity=-0.059  Sum_probs=89.3

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-HH--HhhcCCccccceeeechhHHHhhhhhhhccC------CCCccch
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-VQ--KDFKGSFWDKLIVHTSTCTFENFIKIKYQIL------KTPAHKL   77 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i~--KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~------~~~~hg~   77 (329)
                      +|+++++|=+|+ +|..  -.-.+.+|+  + ++  |.+ | -.-+|++.+++++.+.+.+......      .......
T Consensus       191 ~g~~~~vDa~qs-~g~~--pidv~~~~~--~~~s~hK~l-G-P~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g  263 (386)
T 3qm2_A          191 PEVVVTADFSST-ILSA--PLDVSRYGV--IYAGAQKNI-G-PAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN  263 (386)
T ss_dssp             TTCCEEEECTTT-TTSS--CCCGGGCSE--EEEETTTTT-C-CTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-----
T ss_pred             CCCEEEEEcccc-cCCC--CCCccccCE--EEEeccccc-C-CCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC
Confidence            689999999988 4332  233444554  4 22  988 3 2236888899887543221000000      0001112


Q ss_pred             hhhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee---eE-EeeceeeEEEeecCCCCCCCCC
Q psy7882          78 KISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG---DV-RGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        78 T~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~---~V-RG~GLm~gIef~~d~~~~~p~~  146 (329)
                      |-+-.  .++.++++-  +.  ++. .++.+++.++|.++|+++    +...   +- ......+.+.+.. .       
T Consensus       264 Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~----~~~~~~~~~~~rs~~iv~f~~~~-~-------  331 (386)
T 3qm2_A          264 TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS----DFYRNDVAQANRSRMNVPFQLAD-N-------  331 (386)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC----SSEECCBCGGGBCSSEEEEEESS-G-------
T ss_pred             CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC----CCcccCCCHHHcCceEEEEECCC-c-------
Confidence            32222  444455543  22  444 566777778887777664    2211   11 0112355666632 1       


Q ss_pred             hHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .....+...+.++||.+...-.....+|+..-...   |++|||.+++++
T Consensus       332 -~~~~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~---t~edId~l~~~l  378 (386)
T 3qm2_A          332 -TLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAM---PIEGVKALTDFM  378 (386)
T ss_dssp             -GGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred             -cccHHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCC---CHHHHHHHHHHH
Confidence             11145667788999987653111245999964444   689999999985

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=95.89  E-value=0.043  Score=54.04  Aligned_cols=171  Identities=12%  Similarity=0.031  Sum_probs=89.3

Q ss_pred             ccccceEEehhHhh-chhccchhhhhcccCCcch-----HHHhhcCCccccceeeechh---------------HHHhhh
Q psy7882           5 YYRDCGVVVSAVDF-GSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC---------------TFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqT-GfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e---------------I~d~~~   63 (329)
                      ..+|+++|.||++. |+--.|.. .. .++ ..|     ..|.|+|.  ..|.++++++               +.+.+.
T Consensus       218 ~~~g~~livD~ah~~g~~~~~~~-~~-p~~-~~div~~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~  292 (483)
T 1rv3_A          218 DENGAYLMADMAHISGLVVAGVV-PS-PFE-HCHVVTTTTHKTLRGC--RAGMIFYRRGVRSVDPKTGKEILYNLESLIN  292 (483)
T ss_dssp             HHTTCEEEEECTTTHHHHHHTSS-CC-GGG-TCSEEEEESSGGGCCC--SCEEEEEECSBCC-------CCBCCHHHHHH
T ss_pred             HHcCCEEEEEccchhcccccCCC-CC-CCC-CCcEEEecCcccCCCC--CceEEEEcchhhhhccccCcchhhHHHHHhh
Confidence            35799999999976 44222210 00 000 246     34999653  4588888874               222222


Q ss_pred             hhhhccCCCCccchhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEee
Q psy7882          64 KIKYQILKTPAHKLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLV  136 (329)
Q Consensus        64 ~~~~~~~~~~~hg~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~  136 (329)
                      ....    +.. .+|...+  .+.+++++.   .-+++ .+++.++.++|.+.|+++  ....+..  |.+ .+.-+.+.
T Consensus       293 ~~~~----~~~-~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~  363 (483)
T 1rv3_A          293 SAVF----PGL-QGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL--GYKIVTG--GSDNHLILVDLR  363 (483)
T ss_dssp             HHHT----TTT-CCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--TCEEGGG--SCSSSEEEEEGG
T ss_pred             hhcC----Ccc-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc--CCEeccC--CCCCceEEEecc
Confidence            1000    011 1111111  233334432   12333 567778888888888764  2222211  111 24445553


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHCCceee----ccC---CCCCEEEEeCccccC-cCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNSRHMTHILDSCKEHGLLLG----RGG---LSGNTLTALQPKLLN-YWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~~~~~~~~~~l~e~GVLl~----~~G---~~~nvIrl~PPL~It-~~t~eeId~~l~~~  197 (329)
                      ...     .+   ...+.+.|.+.||.+.    |..   .....+||..|...+ ..+++|++++++++
T Consensus       364 ~~g-----~~---~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l  424 (483)
T 1rv3_A          364 SKG-----TD---GGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFI  424 (483)
T ss_dssp             GGT-----CC---HHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred             CCC-----CC---HHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHH
Confidence            211     11   2346677788999988    521   134689999886442 12379999999975

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=95.87  E-value=0.036  Score=55.49  Aligned_cols=89  Identities=12%  Similarity=0.085  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeEEeec-eeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeecc---C----
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKG-LMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRG---G----  168 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~---G----  168 (329)
                      .+++.+..++|.++|++.  .+..+.  .|.+ -++-+.+....     .   ....+...|.+.||.+...   +    
T Consensus       337 ~~~~~~na~~L~~~L~~~--G~~v~~--~~t~t~lv~vdl~~~g-----~---~~~~~~~~L~~~GI~v~~~~~p~d~~p  404 (490)
T 2a7v_A          337 SLQVLKNARAMADALLER--GYSLVS--GGTDNHLVLVDLRPKG-----L---DGARAERVLELVSITANKNTCPGDRSA  404 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHT--TCEEGG--GSCSSSEEEEECTTTT-----C---CHHHHHHHHHHTTEECEEECCTTCCCS
T ss_pred             HHHHHHHHHHHHHHHHHc--CcEEec--CCCCCeEEEEEeCCCC-----C---CHHHHHHHHHhCCeEEecCccCCCCCC
Confidence            567788888888888764  222221  1111 24445553211     1   1345777888899999742   1    


Q ss_pred             CCCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882         169 LSGNTLTALQP-KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       169 ~~~nvIrl~PP-L~It~~t~eeId~~l~~~  197 (329)
                      ..+..||+.-| ++.--.+++|+++++++.
T Consensus       405 ~~~~~iRig~~a~t~~g~~~~d~~~~~~~i  434 (490)
T 2a7v_A          405 ITPGGLRLGAPALTSRQFREDDFRRVVDFI  434 (490)
T ss_dssp             SSCSEEEEESHHHHHTTCCHHHHHHHHHHH
T ss_pred             CCCCceEecccccccCCCCHHHHHHHHHHH
Confidence            12467999655 443345789999999874

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=95.85  E-value=0.028  Score=56.62  Aligned_cols=53  Identities=21%  Similarity=0.143  Sum_probs=36.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechh-HHHhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTC-TFENF   62 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~e-I~d~~   62 (329)
                      ..+|+++|.||++..|...+.-..    .+.||       ++|.++ .| +.+|.++++++ +.+.+
T Consensus       277 ~~~~~~ii~De~y~~~~~~~~s~~----~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l  338 (546)
T 2zy4_A          277 HRPDLMILTDDVYGTFADDFQSLF----AICPENTLLVYSFSKYFGATG-WRLGVVAAHQQNVFDLA  338 (546)
T ss_dssp             TCTTCEEEEECTTGGGSTTCCCHH----HHCGGGEEEEEESTTTTTCGG-GCEEEEEEESSCHHHHH
T ss_pred             ccCCcEEEEeCcchhhcccCcCHH----HhCCCCEEEEEeCccccCCCC-cceEEEEECCHHHHHHH
Confidence            357999999999998864221111    11244       579996 66 48999998885 76665

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=95.07  E-value=0.13  Score=49.56  Aligned_cols=173  Identities=10%  Similarity=-0.036  Sum_probs=90.8

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-H--HHhhcCCccccceeeechhHHHhhhhhhhccCC--CC-ccchhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-V--QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILK--TP-AHKLKI   79 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-i--~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~--~~-~hg~T~   79 (329)
                      .+|+++++|=||+ +|-.  -+-.+.+|+  . +  -|.+ |. .-+|++.+++++.+...+.......  .. ..+.++
T Consensus       175 ~~~~~~~vD~~q~-~g~~--~id~~~~~~--~~~s~~K~~-gp-~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~  247 (377)
T 3e77_A          175 VKGAVLVCDMSSN-FLSK--PVDVSKFGV--IFAGAQKNV-GS-AGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLY  247 (377)
T ss_dssp             CTTCCEEEECTTT-TTSS--CCCGGGCSE--EEEEGGGTT-SC-TTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCS
T ss_pred             cCCCEEEEEcccc-cCCC--CCchhhcCE--EEEeccccc-CC-CccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCC
Confidence            5799999999998 4322  233445554  3 2  2988 32 2468888888875433210000000  00 011111


Q ss_pred             h-cc----HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCcee----eE-EeeceeeEEEeecCCCCCCC
Q psy7882          80 S-DT----VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIVG----DV-RGKGLMIGVDLVQDKETKVP  144 (329)
Q Consensus        80 a-gn----lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v~----~V-RG~GLm~gIef~~d~~~~~p  144 (329)
                      + -+    .++.++++-  +.  ++. .++.+++.++|.++|+++    |.+.    +- ...+....+.+..-.    +
T Consensus       248 ~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~----~g~~~~~~~~~~rs~~ivsf~~~~~~----~  319 (377)
T 3e77_A          248 NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNS----QGFYVCPVEPQNRSKMNIPFRIGNAK----G  319 (377)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS----TTSEECCSCGGGBCSSEEEEEESSTT----C
T ss_pred             CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhc----CCceecCCCHHHcCCcEEEEEcCCCC----C
Confidence            1 12    233333332  11  333 456667777777777654    2111    10 112344666664211    0


Q ss_pred             CChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       +.+....+...+.++||.+.+.-.....+|+..-...   |++|||.+++++
T Consensus       320 -~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~---t~edId~l~~al  368 (377)
T 3e77_A          320 -DDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAV---TIEDVQKLAAFM  368 (377)
T ss_dssp             -CHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred             -chhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCC---CHHHHHHHHHHH
Confidence             1233345778888999988653222356999875444   689999999985

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=95.02  E-value=0.077  Score=51.50  Aligned_cols=51  Identities=10%  Similarity=-0.123  Sum_probs=33.0

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcc-ccceeeechhHHHhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFW-DKLIVHTSTCTFENFI   63 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~-PigAv~~~~eI~d~~~   63 (329)
                      +|+++|+||++.-. -.+.     ....-.|     +.|.++|+.. ..|++++++++.+.+.
T Consensus       198 ~g~~livD~a~a~~-~~~~-----p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~  254 (415)
T 2fq6_A          198 PDAIIMIDNTWAAG-VLFK-----ALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLR  254 (415)
T ss_dssp             TTCEEEEECTTTTT-TSSC-----GGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHH
T ss_pred             CCCEEEEECCCccc-ccCC-----ccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHH
Confidence            89999999998622 1111     1122357     3599987532 3588888888776654

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=94.77  E-value=0.44  Score=46.75  Aligned_cols=179  Identities=9%  Similarity=-0.060  Sum_probs=90.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhHH--Hhhhhh-hh---cc-C-
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCTF--ENFIKI-KY---QI-L-   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI~--d~~~~~-~~---~~-~-   70 (329)
                      ..||+.+++|+++.|.-..+..+.....|+ ..|     ..|.+++.+ .+|+++++.+-.  +.+... .+   .. . 
T Consensus       261 ~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~  339 (475)
T 3k40_A          261 NKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNF-DCSAMWLKDPSWVVNAFNVDPLYLKHDMQGS  339 (475)
T ss_dssp             HHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-SCEEEEESSGGGC------------------
T ss_pred             HHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCC-ceEEEEEeCHHHHHHHhcCCccccCCCcCCC
Confidence            467999999999876433332222222344 246     349887763 677888776421  222110 00   00 0 


Q ss_pred             -C---CCccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          71 -K---TPAHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        71 -~---~~~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                       .   ......+.... +++.+++..   +-+++ +++..++.+++.++|+++ .....+...  ...++.+.+..    
T Consensus       340 ~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~g~~l~~~~--~~~iv~f~~~~----  412 (475)
T 3k40_A          340 APDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD-SRFELAAEI--NMGLVCFRLKG----  412 (475)
T ss_dssp             ---------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-TTEEESSCC--BTTEEEEEESS----
T ss_pred             CCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEecCC--ceEEEEEEeCC----
Confidence             0   00000111112 344444432   22333 667778888888888764 111112111  22344555432    


Q ss_pred             CCCCChHHHHHHHHHHHHCCcee-eccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLL-GRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl-~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          .......+.+.+.++|.+. .+... ....+|+...  ....|++||+++++++
T Consensus       413 ----~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~--~~~tt~~di~~~~~~i  464 (475)
T 3k40_A          413 ----SNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAIC--SRFTQSEDMEYSWKEV  464 (475)
T ss_dssp             ----CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECC--CTTCCHHHHHHHHHHH
T ss_pred             ----chHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeC--CCCCCHHHHHHHHHHH
Confidence                1234567888888888754 32211 2357888642  2222689999999985

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=94.41  E-value=0.16  Score=50.19  Aligned_cols=176  Identities=6%  Similarity=-0.029  Sum_probs=85.4

Q ss_pred             ccccceEEehhHhhchhccch--hhhhccc--CCc----ch--------HHHhhc--CCccccceee---echhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT--YLGFQCL--QIC----RF--------VQKDFK--GSFWDKLIVH---TSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~--~fA~e~~--GV~----PD--------i~KaLg--GG~~PigAv~---~~~eI~d~~~   63 (329)
                      ..||+++|.||+...+...+.  ...+...  .+.    .|        ++|++.  .|+ .+|.++   .++++.+.+.
T Consensus       265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~-R~G~~~~~~~~~~l~~~l~  343 (498)
T 3ihj_A          265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGY-RGGYMEVINLHPEIKGQLV  343 (498)
T ss_dssp             HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSS-CCEEEEEESCCHHHHHHHH
T ss_pred             HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCccc-ceEEEEEecCCHHHHHHHH
Confidence            357999999999987643321  1111110  011    11        469995  474 788777   5888888765


Q ss_pred             hhhhccCCCCccchhhhccHHHHHHHHh---------hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeecee
Q psy7882          64 KIKYQILKTPAHKLKISDTVRPHVQIKK---------SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLM  130 (329)
Q Consensus        64 ~~~~~~~~~~~hg~T~agnlA~aaala~---------~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm  130 (329)
                      ....    ....+++.+. .++++++..         +.+++    .+++++..+++.+.|++    +|.+..+...|.|
T Consensus       344 ~~~~----~~~~~~~~~q-~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~~g~~~~~p~gg~  414 (498)
T 3ihj_A          344 KLLS----VRLCPPVSGQ-AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ----VPGIHCNPLQGAM  414 (498)
T ss_dssp             HHHH----HSCCCCHHHH-HHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT----STTEECCCCCBSS
T ss_pred             HHHh----ccCCCCHHHH-HHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEecCCCeEE
Confidence            3100    0111111111 233333321         11111    23444455555555543    4444333334444


Q ss_pred             eE-EEeecCCCC-----CCCCChHHHHH-HHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         131 IG-VDLVQDKET-----KVPLNSRHMTH-ILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       131 ~g-Ief~~d~~~-----~~p~~~~~~~~-~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +. +.+..+...     ....+.  ... +...+.++||++.+..     ...+.+|+.-  .   +++++++++++.+
T Consensus       415 ~~~~~l~~p~~~~~~~~~~g~~~--~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~--~---~~~e~l~~~i~~L  486 (498)
T 3ihj_A          415 YAFPRIFIPAKAVEAAQAHQMAP--DMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI--L---PPVEKLKTVLQKV  486 (498)
T ss_dssp             EECCEECCCHHHHHHHHHTTSCH--HHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC--C---SCHHHHHHHHHHH
T ss_pred             EEEEeccCchhhhHHHHhcCCCc--HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe--C---CCHHHHHHHHHHH
Confidence            33 244211000     000000  112 3455667899998732     1235788865  1   3689999999875

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=94.03  E-value=0.17  Score=49.07  Aligned_cols=138  Identities=8%  Similarity=-0.086  Sum_probs=73.3

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      +|+++|+||++.-+ ..    ..+......|     +.|.++|+..|. |.+++++++.+.+........-....+.+.+
T Consensus       194 ~~~~livD~a~~~~-~~----~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~  268 (409)
T 3jzl_A          194 PEVIVFVDNCYGEF-VE----YQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY  268 (409)
T ss_dssp             TTCEEEEECTTCTT-TS----SCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT
T ss_pred             CCCEEEEeCCcccc-cc----cCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH
Confidence            89999999996432 10    0111122346     459999876565 7788898888876531000000001122222


Q ss_pred             ccHHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882          81 DTVRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK  158 (329)
Q Consensus        81 gnlA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~  158 (329)
                      .+.++..++.+  +.. +++..+...++.+.|+++--+ +|. ..-.+..+++.|.+.+         .+...++++.+.
T Consensus       269 ~~~~~l~gl~~--~~~r~~~~~~~a~~la~~L~~~g~~v~p~-~~~~~~~~i~~i~l~~---------~~~~~~~~~~L~  336 (409)
T 3jzl_A          269 SLLEMYQGFFL--APHVTAQAIKGARFTAAMLAEFGVEADPV-WDAPRTDLIQSVSFHN---------KEKMVAFAQAIQ  336 (409)
T ss_dssp             CHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCCEEECSC---------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCCccEEEEEEeCC---------HHHHHHHHHHHH
Confidence            22233334433  111 556667777777777664110 111 1112344588888852         245677888888


Q ss_pred             HCC
Q psy7882         159 EHG  161 (329)
Q Consensus       159 e~G  161 (329)
                      +..
T Consensus       337 ~~~  339 (409)
T 3jzl_A          337 AAS  339 (409)
T ss_dssp             HTS
T ss_pred             hcC
Confidence            764

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=94.01  E-value=1.2  Score=43.13  Aligned_cols=178  Identities=9%  Similarity=-0.135  Sum_probs=89.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhH--HHhhhh-hhh--ccC---
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCT--FENFIK-IKY--QIL---   70 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI--~d~~~~-~~~--~~~---   70 (329)
                      ..||+++++|+++.|+-....-+.....|+ ..|     ..|.++.. +.+|+++++++-  .+.+.. ..+  ...   
T Consensus       262 ~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~  340 (486)
T 1js3_A          262 HEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS  340 (486)
T ss_dssp             HHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------C
T ss_pred             HHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence            468999999999987543221111111233 134     45988765 377888887652  233311 000  000   


Q ss_pred             ---CCCcc---chhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-EeeceeeEEEeecC
Q psy7882          71 ---KTPAH---KLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-RGKGLMIGVDLVQD  138 (329)
Q Consensus        71 ---~~~~h---g~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-RG~GLm~gIef~~d  138 (329)
                         ....+   ..+.... +++.++++.   +-+++ +++..++.+++.+.|+++    |.+.-+ .-.+.++.+.+.. 
T Consensus       341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~-  415 (486)
T 1js3_A          341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD----PRFEVCAEVTLGLVCFRLKG-  415 (486)
T ss_dssp             CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----TTEEECSCCCSSEEEEEESS-
T ss_pred             cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCceeEEEEEecC-
Confidence               00000   0011112 444444432   23333 566777777777777653    322111 1124455555431 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                             .......+...|.++|++....+.  ....+|+.-.  ....+++||+++++++
T Consensus       416 -------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~--~~~~t~~di~~~~~~l  467 (486)
T 1js3_A          416 -------SDGLNEALLERINSARKIHLVPCRLRGQFVLRFAIC--SRKVESGHVRLAWEHI  467 (486)
T ss_dssp             -------CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECC--CTTCCHHHHHHHHHHH
T ss_pred             -------hHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeC--CCCCCHHHHHHHHHHH
Confidence                   012346688888888865432111  2357887631  1122689999999975

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=93.94  E-value=0.63  Score=45.54  Aligned_cols=179  Identities=12%  Similarity=-0.064  Sum_probs=91.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechhHH-H-hhhh-hhhccCC----
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTCTF-E-NFIK-IKYQILK----   71 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~eI~-d-~~~~-~~~~~~~----   71 (329)
                      .+||+.+++|+.+.|+...+..+.....|+ ..|     ..|.+++-+ .+|+++++++-. . .+.. ..+-...    
T Consensus       268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~  346 (481)
T 4e1o_A          268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHF-DCTGFWVKDKYKLQQTFSVNPIYLRHANSGV  346 (481)
T ss_dssp             HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-SCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred             HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCC-ceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence            467999999999887643333233323455 236     359987653 677787776532 1 1110 0000000    


Q ss_pred             --CC---ccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          72 --TP---AHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        72 --~~---~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                        ..   ....+.... +++.+++..   +-+++ +++..++.++|.++|+++- ....+...  ...++.+.+..    
T Consensus       347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-g~~~~~~~--~~~~v~f~~~~----  419 (481)
T 4e1o_A          347 ATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDP-SFEIPAKR--HLGLVVFRLKG----  419 (481)
T ss_dssp             SCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-TEECCSCC--CSSEEEEEESS----
T ss_pred             CCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--ceeEEEEEeCC----
Confidence              00   000111112 344444432   23333 6677778888877776531 11111111  12344454421    


Q ss_pred             CCCCChHHHHHHHHHHHHCCce-eeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLL-LGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVL-l~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                          .......+.+.+.++|.+ +.+... ....+|+...  ....|++||+++++++
T Consensus       420 ----~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~--~~~tt~~di~~~~~~i  471 (481)
T 4e1o_A          420 ----PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVT--SQFTTRDDILRDWNLI  471 (481)
T ss_dssp             ----CHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECC--CTTCCHHHHHHHHHHH
T ss_pred             ----chHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeC--CCCCCHHHHHHHHHHH
Confidence                123456788889888844 333211 2357887642  2222689999999985

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=93.62  E-value=1  Score=44.57  Aligned_cols=186  Identities=10%  Similarity=-0.101  Sum_probs=92.0

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cch-----HHHhhcCCccccceeeechh-HHHhhhhhhhccCC-CC---
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRF-----VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILK-TP---   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PD-----i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~-~~---   73 (329)
                      ..||+.+++|+++.|.-....-+.....|+ ..|     ..|.+++. ..+|+++++.+ .............. ..   
T Consensus       275 ~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~  353 (511)
T 3vp6_A          275 EKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHY  353 (511)
T ss_dssp             HHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSS
T ss_pred             HHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCccccc
Confidence            467999999999887533222122222243 235     34988765 35677877664 44432110000000 00   


Q ss_pred             ---------ccchhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE---eeceeeEEEee
Q psy7882          74 ---------AHKLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR---GKGLMIGVDLV  136 (329)
Q Consensus        74 ---------~hg~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR---G~GLm~gIef~  136 (329)
                               ....+-... +++.+++..   +-+++ +++..++.+++.+.|+++    |.+.-+.   -...++.+.+.
T Consensus       354 ~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~----pg~~l~~~~~p~~~~v~f~~~  429 (511)
T 3vp6_A          354 DVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR----EEFEMVFNGEPEHTNVCFWYI  429 (511)
T ss_dssp             CGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----TTEEESSSSCCSSSCEEEEEC
T ss_pred             ccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCEEEEecCCCCeEEEEEEEe
Confidence                     000010112 444444443   23333 667778888888877653    3221111   23344555553


Q ss_pred             cCCCCCCCCCh-------HHHHHHHHHHHHCCceeecc---CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         137 QDKETKVPLNS-------RHMTHILDSCKEHGLLLGRG---GLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       137 ~d~~~~~p~~~-------~~~~~~~~~l~e~GVLl~~~---G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +......+-+.       .....+.+.|.++|+++...   +...+.+|+..  ....++++||+.+++++
T Consensus       430 p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~--~~~~~t~~di~~ll~~i  498 (511)
T 3vp6_A          430 PQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVI--SNPAATQSDIDFLIEEI  498 (511)
T ss_dssp             CGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECC--CCTTCCHHHHHHHHHHH
T ss_pred             CccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEe--cCCCCCHHHHHHHHHHH
Confidence            22110000001       12346888999999755431   11124688864  12234689999999874

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=93.59  E-value=1  Score=44.43  Aligned_cols=87  Identities=10%  Similarity=-0.039  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeEEe--eceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccCC-----
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRG--KGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL-----  169 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG--~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-----  169 (329)
                      .++..++.++|.+.|+++    +.+.-+..  ...++.+.+..+..    ++   ...+.+.|.++|+++..+..     
T Consensus       344 ~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~----~~---~~~l~~~L~~~Gi~v~~~~~p~~~~  412 (502)
T 3hbx_A          344 MENCRENMIVLREGLEKT----ERFNIVSKDEGVPLVAFSLKDSSC----HT---EFEISDMLRRYGWIVPAYTMPPNAQ  412 (502)
T ss_dssp             HHHHHHHHHHHHHHHHTT----TCEEECSCSSSSSEEEEEESSCSS----CC---HHHHHHHHHTTTCBCCEEECCTTCT
T ss_pred             HHHHHHHHHHHHHHHHhC----CCEEEEeCCCCceEEEEEecCCCc----CC---HHHHHHHHHhCCcEEeeccCCcccC
Confidence            566777777777777654    32211111  23456666642211    11   23688889999998753211     


Q ss_pred             CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         170 SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       170 ~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+|+..-.   .+|++|++.+++.+
T Consensus       413 ~~~~lRisv~~---~~t~edid~li~~L  437 (502)
T 3hbx_A          413 HITVLRVVIRE---DFSRTLAERLVIDI  437 (502)
T ss_dssp             TCEEEEEECCT---TCCHHHHHHHHHHH
T ss_pred             CceEEEEEeCC---CCCHHHHHHHHHHH
Confidence            23578887543   34689999999975

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=93.38  E-value=0.79  Score=48.03  Aligned_cols=43  Identities=14%  Similarity=0.100  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +..+.+.|.++||++...+  ...+++...+-.   |+++++.+++++
T Consensus       517 ~~~l~~~L~e~GI~v~~~~--~~~ir~~~s~g~---t~e~i~~Ll~aL  559 (730)
T 1c4k_A          517 ATIVANYLRDHGIIPEKSD--LNSILFLMTPAE---TPAKMNNLITQL  559 (730)
T ss_dssp             HHHHHHHHHHTTCCCSEEC--SSEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCcEEEECC--CCeEEEEeCCCC---CHHHHHHHHHHH
Confidence            4567888889999998764  467788765544   689999999974

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=92.93  E-value=1  Score=43.05  Aligned_cols=84  Identities=11%  Similarity=-0.064  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHHHHHHHHCCcee--eccC-CCCC
Q psy7882          97 FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLL--GRGG-LSGN  172 (329)
Q Consensus        97 le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~e~GVLl--~~~G-~~~n  172 (329)
                      .++..++.+++.++|+++    +.+ .+.+. ..+..+.+..+.         ....+.+.|.++||.+  .+.. ...+
T Consensus       346 ~~~~~~~~~~l~~~L~~~----~g~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~gi~v~~~~~~~~~~~  411 (438)
T 1wyu_A          346 ALKSVEMAHKLHALLLEV----PGV-RPFTPKPFFNEFALALPK---------DPEAVRRALAERGFHGATPVPREYGEN  411 (438)
T ss_dssp             HHHHHHHHHHHHHHHTTS----TTC-EECSCSSBCSEEEEECSS---------CHHHHHHHHHHTTCCCCEECCTTSCSS
T ss_pred             HHHHHHHHHHHHHHHhcC----CCe-EECCCCCeEEEEEEeCCC---------CHHHHHHHHHHCCceeccccccccCCC
Confidence            455666667776666543    211 22222 233333332110         1346888899999998  3321 1257


Q ss_pred             EEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         173 TLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       173 vIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+|+.+....   |++|++++++++
T Consensus       412 ~lRis~~~~~---t~edi~~~~~~l  433 (438)
T 1wyu_A          412 LALFAATELH---EEEDLLALREAL  433 (438)
T ss_dssp             EEEEECCTTC---CHHHHHHHHHHH
T ss_pred             eEEEEecccC---CHHHHHHHHHHH
Confidence            8999886544   689999999875

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=92.37  E-value=2.9  Score=40.05  Aligned_cols=176  Identities=9%  Similarity=-0.031  Sum_probs=86.5

Q ss_pred             ccceEEehhHhhchhc---cchh-hhhcccCCcch-----HHHhhcCCccccceeeechh-HH-Hhhhh-hhhccCC--C
Q psy7882           7 RDCGVVVSAVDFGSGD---NGTY-LGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC-TF-ENFIK-IKYQILK--T   72 (329)
Q Consensus         7 ~giLLI~DEVqTGfGR---TG~~-fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e-I~-d~~~~-~~~~~~~--~   72 (329)
                      +|+++++||++.|+..   .+.. +..+..  .-|     ..|.+.+| ..+|+++++++ .. +.+.. ..+-...  .
T Consensus       222 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (452)
T 2dgk_A          222 IDIDMHIDAASGGFLAPFVAPDIVWDFRLP--RVKSISASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGT  298 (452)
T ss_dssp             CCCCEEEECTTGGGTHHHHCTTCCCSTTST--TEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEE
T ss_pred             CCCcEEEEcccHHHHHHhhCccchhhcCCC--CCcEEEECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCC
Confidence            5999999999988632   1110 111111  234     23866565 37888988754 32 33311 0000000  0


Q ss_pred             Cccchhhhc-c-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeE-E----eeceeeEEEeecCCCC
Q psy7882          73 PAHKLKISD-T-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDV-R----GKGLMIGVDLVQDKET  141 (329)
Q Consensus        73 ~~hg~T~ag-n-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~V-R----G~GLm~gIef~~d~~~  141 (329)
                      +....|-.+ . ++..++++.   +-+++ .++..++.++|.+.|++    .+.+.-+ .    ..+.++.+.+..... 
T Consensus       299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~~~~v~f~~~~~~~-  373 (452)
T 2dgk_A          299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK----LGPYEFICTGRPDEGIPAVCFKLKDGED-  373 (452)
T ss_dssp             CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TSSEEEEEECCTTTBSSEEEEEECTTCC-
T ss_pred             cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEecCCCCCCCeEEEEEEecCccc-
Confidence            000111112 2 333333332   22333 55666666777666654    3422111 1    134456666642110 


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeecc----C-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRG----G-LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~----G-~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..++   ...+.+.|.++|+++..+    . .....+|+..--.   .|++|+|.+++++
T Consensus       374 -~~~~---~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~---~t~e~id~li~~l  427 (452)
T 2dgk_A          374 -PGYT---LYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRG---FEMDFAELLLEDY  427 (452)
T ss_dssp             -CSCC---HHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTT---CCHHHHHHHHHHH
T ss_pred             -ccCC---HHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCC---CCHHHHHHHHHHH
Confidence             0011   246888899999975432    1 1234788865332   3689999999985

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=91.81  E-value=1.9  Score=45.18  Aligned_cols=42  Identities=12%  Similarity=-0.036  Sum_probs=30.1

Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|.++||.+..++  .+.++++..+-.   |+++++.+++++
T Consensus       557 ~~l~~~L~~~gI~~e~~~--~~~v~~~~~~g~---t~~~~~~l~~al  598 (755)
T 2vyc_A          557 ALVTAWLGRHGIVPTRTT--DFQIMFLFSMGV---TRGKWGTLVNTL  598 (755)
T ss_dssp             HHHHHHHHTTTCCCSEEC--SSEEEEECCTTC---CTTTTHHHHHHH
T ss_pred             HHHHHHHHHCCCEEeecC--CCeEEEEECCCC---CHHHHHHHHHHH
Confidence            456677888999987654  567777766655   467888888864

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=91.66  E-value=2.4  Score=40.31  Aligned_cols=166  Identities=10%  Similarity=-0.008  Sum_probs=87.5

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcchH---H--HhhcCCccccceeeechhHHHhhhhh-hhccCC------CCc
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV---Q--KDFKGSFWDKLIVHTSTCTFENFIKI-KYQILK------TPA   74 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi---~--KaLgGG~~PigAv~~~~eI~d~~~~~-~~~~~~------~~~   74 (329)
                      +|+++++|-||+ +|..  -+-.+    ..|+   +  |.+ | -.-+|++.+++++.+.+.+. ......      ...
T Consensus       163 ~~~~~~vD~~q~-~g~~--~id~~----~~d~~~~s~~K~~-g-p~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  233 (361)
T 3m5u_A          163 TKTPLIVDASSD-FFSR--KVDFS----NIALFYGGVQKNA-G-ISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQS  233 (361)
T ss_dssp             CSSCEEEECGGG-TTSS--CCCCT----TEEEEEEETTTTS-S-CTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTT
T ss_pred             cCCEEEEEcccc-cCCC--CCCcc----cCCEEEEechhcc-C-CCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCC
Confidence            389999999998 4322  11111    1362   1  988 3 22378999999987655320 000000      000


Q ss_pred             cchhhhcc--HHHHHHHHh--hH--HhH-HHHHHHHHHHHHHHHHHHHHhCCce----e--eEEeeceeeEEEeecCCCC
Q psy7882          75 HKLKISDT--VRPHVQIKK--SV--LER-FVHTYVVGNFLLTHLSKLREEFAIV----G--DVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        75 hg~T~agn--lA~aaala~--~i--le~-le~v~~lG~~L~~gL~eL~~~~p~v----~--~VRG~GLm~gIef~~d~~~  141 (329)
                      ..+|-+-.  .++.++++-  +.  ++. .++.+++.++|.++|+++    +.+    .  +-| ...+..+.+....  
T Consensus       234 ~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~----~g~~~~~~~~~~r-s~~ivsf~~~~~~--  306 (361)
T 3m5u_A          234 LFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLS----NGFYKGHADKKDR-SLMNVSFNIAKNK--  306 (361)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTS----TTSEEESSCGGGB-CSSEEEEEESSCT--
T ss_pred             CCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC----CCeeeccCCHHHc-CCeEEEEECCCch--
Confidence            01121111  333444432  22  333 456667777777777654    311    1  111 1234566653201  


Q ss_pred             CCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                            .....+...|.++||.+...-..-..+|+.+-...   |++|||.+++++
T Consensus       307 ------~~~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~---t~edId~l~~al  353 (361)
T 3m5u_A          307 ------DLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNAL---NLDQVKTLCEFM  353 (361)
T ss_dssp             ------THHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred             ------hhhHHHHHHHHHCCCEEecCCCccCeEEEEccCCC---CHHHHHHHHHHH
Confidence                  11135777888999988653112256999875444   689999999985

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=91.43  E-value=1.2  Score=43.39  Aligned_cols=152  Identities=7%  Similarity=-0.035  Sum_probs=79.3

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccchh--
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKLK--   78 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~T--   78 (329)
                      +|+++|+||++.-+.....     ......|     +.|.++|+..|. |.+++++++.+.+.....    ....+.+  
T Consensus       211 ~g~~livD~a~~~~~~~~~-----p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~----~~~~g~~~~  281 (427)
T 3i16_A          211 KDIICFVDNCYGEFMDTKE-----PTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLT----VPGIGGECG  281 (427)
T ss_dssp             TTSEEEEECTTTTTSSSSC-----GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHS----CTTTGGGCC
T ss_pred             CCCEEEEECCCccccccCC-----ccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcc----cCccCccCC
Confidence            7999999999763311111     1111236     469999876564 778889888887653100    0111222  


Q ss_pred             --hhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCc-e---eeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          79 --ISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAI-V---GDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        79 --~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~-v---~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                        +..+..+..++.+ ...  +++..+...++.+.|+++    +. +   ..-.+..+++.|.+..         .+.+.
T Consensus       282 ~~~~~a~~~l~gl~~~~~r--~~~~~~~a~~la~~L~~~----g~~V~p~~~~~~~~~i~~i~l~~---------~~~~~  346 (427)
T 3i16_A          282 STFGVVRSMYQGLFLAPHI--SMEALKGAILCSRIMELA----GFEVMPKYDEKRSDIIQSIKFND---------KDKLI  346 (427)
T ss_dssp             CCTTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHT----TCEEESCTTSCCSSSCEEEECSS---------HHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhC----CCeecCCCCCCCccEEEEEEECC---------HHHHH
Confidence              3222233334433 111  455666666777766654    32 1   0112234488888852         24567


Q ss_pred             HHHHHHHHC---Cceeec-----cCCCCCEEEEeCcccc
Q psy7882         152 HILDSCKEH---GLLLGR-----GGLSGNTLTALQPKLL  182 (329)
Q Consensus       152 ~~~~~l~e~---GVLl~~-----~G~~~nvIrl~PPL~I  182 (329)
                      +|++.+...   +.++.|     .|....+|.-.-.|+-
T Consensus       347 ~f~~~l~~~~~~~s~~~p~~~~~~gy~~~~~~~~~~~~~  385 (427)
T 3i16_A          347 EFCKGIQTGSPIDSFVSCEPWDMPGYTDQVIMAAGAFIQ  385 (427)
T ss_dssp             HHHHHHHHTCSSSTTSCCCCBCC---CCCEEEEECCSST
T ss_pred             HHHHHHhhcCcccccccCcCCCCCCCCCceeeccCcCCC
Confidence            788888776   333332     1334455554444443

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=90.64  E-value=1.8  Score=42.18  Aligned_cols=130  Identities=5%  Similarity=-0.054  Sum_probs=69.9

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCcccc-ceeeechhHHHhhhhhhhccCCCCccch---
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDK-LIVHTSTCTFENFIKIKYQILKTPAHKL---   77 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~Pi-gAv~~~~eI~d~~~~~~~~~~~~~~hg~---   77 (329)
                      +|+++|+||++..+.....     ......|     +.|.++|+..|. |.+++++++.+.+.....    ....+.   
T Consensus       211 ~g~~livD~a~~~~~~~~~-----p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~----~~~~g~~~~  281 (427)
T 3hvy_A          211 ENVIVFVDNCYGEFVEEKE-----PTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVT----VPGIGGECG  281 (427)
T ss_dssp             SSSEEEEECTTCTTTSSSC-----GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHS----CTTTGGGCC
T ss_pred             CCCEEEEECCccccccCCC-----CcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhh----cCCcccccC
Confidence            7999999999753311111     1112236     469999876565 677788888887653100    011121   


Q ss_pred             -hhhccHHHHHHHHh-hHHhHHHHHHHHHHHHHHHHHHHHHhCCc-e---eeEEeeceeeEEEeecCCCCCCCCChHHHH
Q psy7882          78 -KISDTVRPHVQIKK-SVLERFVHTYVVGNFLLTHLSKLREEFAI-V---GDVRGKGLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        78 -T~agnlA~aaala~-~ile~le~v~~lG~~L~~gL~eL~~~~p~-v---~~VRG~GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                       ++..+..+..++.+ ...  +++..+...++.+.|+++    +. +   ..-.+..+++.|.+..         .+...
T Consensus       282 ~~~~~a~~~~~gl~~~~~r--~~~~~~~a~~la~~L~~~----g~~V~p~~~~~~~~li~~~~l~~---------~~~~~  346 (427)
T 3hvy_A          282 STFGVMRSLYEGLFMAPHV--TIEAVKGAVFCARIMELA----GFDVLPKYNDKRTDIIQAIKFND---------EKKLI  346 (427)
T ss_dssp             CCTTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHT----TCEEESCTTSCCSSSEEEEECSS---------HHHHH
T ss_pred             CCHHHHHHHHHhHhHHHHH--HHHHHHHHHHHHHHHHhC----CCeecCCCCCCCceEEEEEeCCC---------HHHHH
Confidence             22222223333433 111  556666677777776654    32 1   0112234488888852         24566


Q ss_pred             HHHHHHHHC
Q psy7882         152 HILDSCKEH  160 (329)
Q Consensus       152 ~~~~~l~e~  160 (329)
                      ++++.+...
T Consensus       347 ~f~~~l~~~  355 (427)
T 3hvy_A          347 DFIKGIQTA  355 (427)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHhccc
Confidence            788887765

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=90.36  E-value=0.64  Score=43.97  Aligned_cols=145  Identities=8%  Similarity=-0.012  Sum_probs=70.3

Q ss_pred             ccceEEehhHhhchhccchhhhhccc-CCcch---H----HHhhcCCccccceeeec-hhHHHhhhhh-hhccCCC---C
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCL-QICRF---V----QKDFKGSFWDKLIVHTS-TCTFENFIKI-KYQILKT---P   73 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~-GV~PD---i----~KaLgGG~~PigAv~~~-~eI~d~~~~~-~~~~~~~---~   73 (329)
                      ||+++|.|++|+ +|-.   +..... +.-.|   +    .|.+++|  ..|+++++ +++.+.+..- ..+....   .
T Consensus       154 ~~~~vi~D~a~a-~g~~---~~~~~~g~~~~d~~~~S~~~~K~l~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~  227 (377)
T 3ju7_A          154 KGVPVVVDAAPG-FGLM---NGGMHYGQDFSGMIIYSFHATKPFGIG--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECT  227 (377)
T ss_dssp             TTCCBEEECTTC-TTCE---ETTEETTTTCSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBC
T ss_pred             cCCEEEEECCCc-cCCe---ECCEeccCCCCcEEEEECCCCCcCCCC--CcEEEEECCHHHHHHHHHHHhcCCCCCCcee
Confidence            799999999997 4322   111223 22245   2    3999875  34556554 5666554420 0110000   0


Q ss_pred             ccchhhhcc-HHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHh-CCceee-EE-eeceeeEEEeecCCCCCCCCCh
Q psy7882          74 AHKLKISDT-VRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREE-FAIVGD-VR-GKGLMIGVDLVQDKETKVPLNS  147 (329)
Q Consensus        74 ~hg~T~agn-lA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~-~p~v~~-VR-G~GLm~gIef~~d~~~~~p~~~  147 (329)
                      ..|..+.-+ +.++.++.. +.++. .++.+++.+++.+.|+++-.- .+.... -. ..-.++.+.+.. .        
T Consensus       228 ~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------  298 (377)
T 3ju7_A          228 MMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE-E--------  298 (377)
T ss_dssp             SSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT-T--------
T ss_pred             eccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC-h--------
Confidence            112223333 444444443 33333 667777888888877764210 011100 00 011122333321 1        


Q ss_pred             HHHHHHHHHHHHCCceeec
Q psy7882         148 RHMTHILDSCKEHGLLLGR  166 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~  166 (329)
                      .....+.+.|.++||.++.
T Consensus       299 ~~~~~l~~~L~~~gI~~~~  317 (377)
T 3ju7_A          299 VRNKQVIEDLKKQKIEARL  317 (377)
T ss_dssp             SCHHHHHHHHHTTTBCCBC
T ss_pred             hhHHHHHHHHHHCCCceec
Confidence            0145688999999998765

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=84.76  E-value=0.8  Score=44.59  Aligned_cols=18  Identities=11%  Similarity=0.080  Sum_probs=15.3

Q ss_pred             ccccceEEehhHhhchhc
Q psy7882           5 YYRDCGVVVSAVDFGSGD   22 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGR   22 (329)
                      ..+++++|+||+..||.-
T Consensus       220 ~~~~~~~~~D~~Y~~~~~  237 (420)
T 4h51_A          220 LAKHHQVFFDSAYQGYAS  237 (420)
T ss_dssp             HHHTCEEEEEESCTTTTT
T ss_pred             HhcCceEeeehhhhhhcc
Confidence            457999999999999953

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=84.32  E-value=9.8  Score=36.31  Aligned_cols=40  Identities=8%  Similarity=-0.311  Sum_probs=27.7

Q ss_pred             HHHHHH-HCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCK-EHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~-e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++..++ ++||++.++..   ..+.+|+...  .   +++++++.++.+
T Consensus       375 ~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~---~~e~l~~~l~~l  418 (427)
T 2hox_A          375 DCYQTFQNGRINTQNGVGFEASSRYVRLSLI--K---TQDDFDQLMYYL  418 (427)
T ss_dssp             SHHHHHHHTTEECEEGGGGTSCTTEEEEECS--S---CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCEEEcCCCccCCCCCEEEEEec--C---CHHHHHHHHHHH
Confidence            555554 79999987421   2468998754  1   578899988864

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=81.67  E-value=3.8  Score=41.13  Aligned_cols=142  Identities=11%  Similarity=0.019  Sum_probs=78.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCC-cchH-----HHhhcCCccccce-ee-e-chhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQI-CRFV-----QKDFKGSFWDKLI-VH-T-STCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV-~PDi-----~KaLgGG~~PigA-v~-~-~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+.+++||-.-+.-+...-+..+.+.. ..|+     =|-+   ++|++. ++ + .++.++.+..         ..
T Consensus       243 h~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~l---lvpIGG~ii~~~d~e~l~~~~~---------~y  310 (501)
T 3hl2_A          243 ANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNF---MVPVGGAIIAGFNDSFIQEISK---------MY  310 (501)
T ss_dssp             HHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHH---CCCSSCEEEEESCHHHHHHHHH---------TS
T ss_pred             HHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccc---eeecCceEEEeCCHHHHHHHHH---------hC
Confidence            357999999985544432222222222222 3662     1664   678854 33 2 4456665542         11


Q ss_pred             chhhhcc--HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChH
Q psy7882          76 KLKISDT--VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        76 g~T~agn--lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~  148 (329)
                      ++|-++.  +.+..++..   +-+.+ +++..++.++|++.|+++...++ .+.+...--.-+++.+...... .   ..
T Consensus       311 PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~-~---~~  386 (501)
T 3hl2_A          311 PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEH-R---DK  386 (501)
T ss_dssp             CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTT-T---SC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccc-c---cc
Confidence            1222233  323333322   44555 78889999999999999998776 3556665666677777532111 0   11


Q ss_pred             HHHHHHHHHHHCCc
Q psy7882         149 HMTHILDSCKEHGL  162 (329)
Q Consensus       149 ~~~~~~~~l~e~GV  162 (329)
                      ....+-..|+.++|
T Consensus       387 ~~t~~gs~Lf~r~v  400 (501)
T 3hl2_A          387 AVTQLGSMLFTRQV  400 (501)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHhcCC
Confidence            24456666776654

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=80.81  E-value=0.81  Score=44.06  Aligned_cols=57  Identities=9%  Similarity=-0.023  Sum_probs=33.5

Q ss_pred             ccccceEEehhHhhchhccch---hhhhccc-CCcch------HHHhhc-CCccccceee---echhHHHhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT---YLGFQCL-QICRF------VQKDFK-GSFWDKLIVH---TSTCTFENF   62 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~---~fA~e~~-GV~PD------i~KaLg-GG~~PigAv~---~~~eI~d~~   62 (329)
                      ..||+++|.||+..+|...+.   ......+ ...+.      ++|.++ .|. -+|.++   ..+++.+.+
T Consensus       204 ~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~~  274 (405)
T 3k7y_A          204 LHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGE-RAGALHIVCKNQEEKKIV  274 (405)
T ss_dssp             HHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTT-TEEEEEEECSSHHHHHHH
T ss_pred             HHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccc-cceEEEEEeCCHHHHHHH
Confidence            357999999999998853221   1111111 11122      579998 774 788764   356665544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	329
d1sffa_	425	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	2e-10
d1ohwa_	461	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	5e-10
d1zoda1	431	c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {P	5e-08
d1z7da1	404	c.67.1.4 (A:7-410) Ornithine aminotransferase {Pla	2e-07
d1vefa1	387	c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine a	6e-07
d2byla1	404	c.67.1.4 (A:36-439) Ornithine aminotransferase {Hu	8e-07
d1s0aa_	429	c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxonona	8e-07

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

 Score = 59.1 bits (142), Expect = 2e-10
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 114 LREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNT 173
           + E+   +GDVRG G MI ++L +D +   P +++    I+   ++ GL+L   G   N 
Sbjct: 337 IAEKHPEIGDVRGLGAMIAIELFEDGDHNKP-DAKLTAEIVARARDKGLILLSCGPYYNV 395

Query: 174 LTALQP 179
           L  L P
Sbjct: 396 LRILVP 401

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]} Length = 461

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 58.1 bits (139), Expect = 5e-10
 Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 12/147 (8%)

Query: 29  FQCLQICRFVQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISDTVRPHVQ 88
                    +        + K ++       E F       +          + +   V 
Sbjct: 299 KFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVI 358

Query: 89  IKKSVLERFVHTYVVGNFLLTHLSKLREEF-AIVGDVRGKGLMIGVDLVQDKETKVPLNS 147
                 +   +    G  LLT L  L+  +   +  VRG+G     D   +         
Sbjct: 359 NIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRN----- 413

Query: 148 RHMTHILDSCKEHGLLLGRGGLSGNTL 174
                ++   +  G++LG  G    ++
Sbjct: 414 ----KLISIARNKGVMLGGCG--DKSI 434

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

 Score = 51.6 bits (122), Expect = 5e-08
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 116 EEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLG--RGGLSGNT 173
           E F  +GDVRG+GL++GV++V+D+ TK P +      I   C   GL +   +    G  
Sbjct: 344 ERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGL-GAKITRECMNLGLSMNIVQLPGMGGV 402

Query: 174 L 174
            
Sbjct: 403 F 403

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

 Score = 49.8 bits (118), Expect = 2e-07
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 110 HLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL 169
           +L +  ++  IV DVRGKGL+  ++   +           +  I    KE+GL+     +
Sbjct: 322 NLKRELKDSKIVRDVRGKGLLCAIEFKNELVN--------VLDICLKLKENGLIT--RDV 371

Query: 170 SGNTL 174
              T+
Sbjct: 372 HDKTI 376

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} Length = 387

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

 Score = 48.2 bits (114), Expect = 6e-07
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 14/76 (18%)

Query: 99  HTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK 158
               +G + +  L  +      + +VRG GLM+G++L +               I    K
Sbjct: 301 RAAELGPWFMEKLRAIPSP--KIREVRGMGLMVGLELKEKAAPY----------IARLEK 348

Query: 159 EHGLLLGRGGLSGNTL 174
           EH +L  + G     +
Sbjct: 349 EHRVLALQAG--PTVI 362

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 8e-07
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 11/65 (16%)

Query: 110 HLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGGL 169
            L KL  +  +V  VRGKGL+  + + + K+            +    +++GLL      
Sbjct: 324 ELMKLPSD--VVTAVRGKGLLNAIVIKETKDWD-------AWKVCLRLRDNGLLA--KPT 372

Query: 170 SGNTL 174
            G+ +
Sbjct: 373 HGDII 377

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]} Length = 429

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

 Score = 47.7 bits (112), Expect = 8e-07
 Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 10/74 (13%)

Query: 95  ERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL 154
           +       +   L   L+  R+   +V DVR  G +  V+                  + 
Sbjct: 331 DWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGVVETTHPVNMAA---------LQ 380

Query: 155 DSCKEHGLLLGRGG 168
               E G+ +   G
Sbjct: 381 KFFVEQGVWIRPFG 394

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	329
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	100.0
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	100.0
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	100.0
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	100.0
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.97
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.22
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	98.81
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	98.7
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	98.64
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	98.54
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	98.19
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	97.8
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	97.56
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	97.46
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	97.36
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	97.2
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	97.19
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	97.18
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	97.03
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	96.89
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	96.53
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	96.53
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	96.43
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	96.37
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	96.21
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	96.19
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	96.11
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	95.97
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	95.96
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	95.91
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	95.9
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	95.6
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	95.59
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	95.59
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	95.13
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	95.04
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	94.53
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	94.1
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	93.87
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	93.04
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	92.86
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	92.15
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	90.55
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	90.41
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	89.67
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	88.74
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	88.42
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	87.17
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	87.16
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	84.33
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	83.81
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	83.08
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	82.99
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	81.94
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	81.3

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-39  Score=318.68  Aligned_cols=189  Identities=21%  Similarity=0.280  Sum_probs=167.7

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-+||+|||+|||||||||||.+|+++++||+||   ++|+|+||| |+||++++++||+.+.+        ..|++||
T Consensus       227 lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~~gK~l~gG~-P~~av~~~~~i~~~~~~--------~~~~~T~  297 (425)
T d1sffa_         227 LCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAVAP--------GGLGGTY  297 (425)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSS-CCEEEEEEHHHHTTSCT--------TSBCCSS
T ss_pred             HHHHcCceEEeccccccCCCcchhhHHHhcCCCccceecccccCCCc-ceEEEEEcHHHHHhhCC--------CCCCCCC
Confidence            34578999999999999999999999999999999   689999996 99999999999988763        6799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   +++++.+|++|+++|+++.++||.+.+|||.|+|++|+|..+.....+ +......++
T Consensus       298 ~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~f~~~~~~~~~-~~~~~~~~~  376 (425)
T d1sffa_         298 AGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP-DAKLTAEIV  376 (425)
T ss_dssp             SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSB-CHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEccccEEEEEEeccCccCCc-cHHHHHHHH
Confidence            999 999999999 98876   899999999999999999999999999999999999999865433222 346778899


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhhh
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQSY  205 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~~  205 (329)
                      +.|+++||++.++|..+|+|+|+|||++   |++|||++++++. .++.++
T Consensus       377 ~~l~~~Gvl~~~~g~~~n~i~~~PpL~i---t~~eid~~l~~l~-~al~ei  423 (425)
T d1sffa_         377 ARARDKGLILLSCGPYYNVLRILVPLTI---EDAQIRQGLEIIS-QCFDEA  423 (425)
T ss_dssp             HHHHHTTEECEEESTTSCEEEECCCTTC---CHHHHHHHHHHHH-HHHHHH
T ss_pred             HHHHHCCCEEeccCCCCCEEEEECCCCC---CHHHHHHHHHHHH-HHHHHh
Confidence            9999999999998888899999999998   5899999999863 355443

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=100.00  E-value=2.6e-37  Score=301.49  Aligned_cols=174  Identities=19%  Similarity=0.218  Sum_probs=156.8

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +.-++|+|||+|||||||||||.+|++|++||+||   ++|+|+||++|+|++++++++++.+.+        +.|++||
T Consensus       215 lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~~--------~~~~~T~  286 (404)
T d1z7da1         215 ICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP--------GEHGSTY  286 (404)
T ss_dssp             HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT--------TCCCCTT
T ss_pred             HHHHcCCEEEEEcCccCCCcccccccccccCCCCCEEEEcccccCCCCCcccccchHHHHccCCC--------CCcCcCC
Confidence            34578999999999999999999999999999999   689999998899999999999987653        6899999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   ++++.++++++.++|.++.++|+.+.+|||.|+|++|+|..+..        ....+.
T Consensus       287 ~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~--------~~~~~~  358 (404)
T d1z7da1         287 GGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELV--------NVLDIC  358 (404)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTC--------CHHHHH
T ss_pred             CCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEEeeCcEEEEEEcCCcc--------cHHHHH
Confidence            999 999999999 88765   88999999999999999999999999999999999999975432        134588


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.+++  +++|+|.|||++   |++|||++++++
T Consensus       359 ~~l~~~Gl~~~~~~--~~~ir~~Ppl~i---t~~~id~~~~~l  396 (404)
T d1z7da1         359 LKLKENGLITRDVH--DKTIRLTPPLCI---TKEQLDECTEII  396 (404)
T ss_dssp             HHHHHTTEECCEET--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHhCCeEEecCC--CCEEEEECCcCC---CHHHHHHHHHHH
Confidence            89999999998864  689999999999   589999999986

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-37  Score=304.07  Aligned_cols=175  Identities=14%  Similarity=0.097  Sum_probs=155.6

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKIS   80 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~a   80 (329)
                      ..+||+|||+|||||||||||.+|+++++||+||   ++|+|+||++|+|++++++++++.+.+   .....+.|++||+
T Consensus       235 c~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~---~~~~~~~~~~T~~  311 (429)
T d1s0aa_         235 CDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISN---GEAGCFMHGPTFM  311 (429)
T ss_dssp             HHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHT---STTSSCSCCCTTT
T ss_pred             HHHcCcceehhhccccccccccccccccceecccccccccccccccccccchhhHHHHHhccCC---CCCcceeecCCCC
Confidence            4578999999999999999999999999999999   579999999999999999999998864   2223478999999


Q ss_pred             cc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          81 DT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        81 gn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +| ++|++++++ +++++   +++++++|++|+++|+++. +++.|.+|||.|+|++++|..+.         ....+..
T Consensus       312 gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~-~~~~v~~vrg~Gl~~~~e~~~~~---------~~~~~~~  381 (429)
T d1s0aa_         312 GNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPAR-DAEMVADVRVLGAIGVVETTHPV---------NMAALQK  381 (429)
T ss_dssp             TCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGG-GCTTEEEEEEETTEEEEEESSCB---------CHHHHHH
T ss_pred             CCcccchhhhccccccccccccchhhHHHHHHHHHHHHhc-cCCceEEEeecccEEEEEecCcc---------cHHHHHH
Confidence            99 999999999 98876   8999999999999999985 47899999999999999997432         1356889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++||++.++   +|+|+|.|||++   |++|||++++++
T Consensus       382 ~~~~~Gl~~~~~---g~~i~~~Ppl~i---t~~eid~~~~~l  417 (429)
T d1s0aa_         382 FFVEQGVWIRPF---GKLIYLMPPYII---LPQQLQRLTAAV  417 (429)
T ss_dssp             HHHHTTEECCCB---TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHCCcEEEec---CCEEEEeCCcCC---CHHHHHHHHHHH
Confidence            999999999875   589999999999   589999999985

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-37  Score=301.40  Aligned_cols=173  Identities=17%  Similarity=0.202  Sum_probs=153.8

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||+|||+|||||||||||++|+++++||+||   ++|+|+||++|+|++++++++++.+.+        ..|++||
T Consensus       217 lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~--------~~~~~T~  288 (404)
T d2byla1         217 LCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP--------GEHFSTY  288 (404)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT--------TSSCCSS
T ss_pred             HHHhcCeEEEeeccccccccccccchhhhcCCCCCEEEECchhhCCCccceeeeechhhhhccCC--------CCCCcCC
Confidence            34578999999999999999999999999999999   689999998899999999999987753        6799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +|| ++|++++++ +++++   +++++++|++|+++|+++.  ++.+.+|||.|+|++|+|.+...       .....+.
T Consensus       289 ~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~--~~~i~~vRg~Gl~~~i~~~~~~~-------~~~~~~~  359 (404)
T d2byla1         289 GGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP--SDVVTAVRGKGLLNAIVIKETKD-------WDAWKVC  359 (404)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTSC--TTTEEEEEEETTEEEEEECCCSS-------CCHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHhcCchhhhhHhhHHHHHHHHhhc--cccceeeeecccEEEEEEecCCc-------hhHHHHH
Confidence            999 999999999 98876   8999999999999999984  46799999999999999975322       1245688


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..|+++||++.+++  +++|+|.|||++   |++|||++++++
T Consensus       360 ~~l~~~Gvl~~~~~--~~~i~l~PpL~i---t~~~id~~~~~l  397 (404)
T d2byla1         360 LRLRDNGLLAKPTH--GDIIRFAPPLVI---KEDELRESIEII  397 (404)
T ss_dssp             HHHHHTTEECEEEE--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHhCCeEEecCC--CCEEEEECCcCC---CHHHHHHHHHHH
Confidence            89999999998763  789999999999   589999999985

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=100.00  E-value=2e-36  Score=297.04  Aligned_cols=184  Identities=22%  Similarity=0.267  Sum_probs=159.8

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||+|||+|||||||||||.+|+++++||+||   ++|+|+||+ |++++++++++++.+..   .   ...|++||
T Consensus       230 lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~~gK~l~gG~-p~~av~~~~~~~~~~~~---~---~~~~~~T~  302 (431)
T d1zoda1         230 KCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGL-PLAAIVTSAAIEERAHE---L---GYLFYTTH  302 (431)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTS-SCEEEEECHHHHHHHHH---T---TCCCCCTT
T ss_pred             HHHhcCceEEeccccccccccccccccccCCCCcchhcccccccccc-ccceeeeeecchhhhhc---c---cccccCCC
Confidence            34578999999999999999999999999999999   689999996 99999999999987653   1   35799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   ++++.++|+++.++++++..+||.+.+|||.|+|++|+|..+.....+. ......+.
T Consensus       303 ~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i~~vrG~Glm~~ie~~~~~~~~~~~-~~~~~~i~  381 (431)
T d1zoda1         303 VSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPA-DGLGAKIT  381 (431)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEEC-TTHHHHHH
T ss_pred             CCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCCCeEEEeecceEEEEEEecCCcccCcc-HHHHHHHH
Confidence            999 999999999 88766   8999999999999999999999999999999999999998765443332 34677899


Q ss_pred             HHHHHCCceeec--cCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGR--GGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~--~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|+++|++...  .+..+++|+++|||++   |++|||++++++
T Consensus       382 ~~~~~~Gl~~~~~~~~~~~~~i~l~Ppl~i---t~~eid~~~~~l  423 (431)
T d1zoda1         382 RECMNLGLSMNIVQLPGMGGVFRIAPPLTV---SEDEIDLGLSLL  423 (431)
T ss_dssp             HHHHHTTEECCEECCTTSCCEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHhCcccCeeeecCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            999999987432  2235899999999999   589999999986

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-34  Score=280.89  Aligned_cols=169  Identities=18%  Similarity=0.273  Sum_probs=150.0

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..++|+|||+|||||||||||.+|+++++||+||   ++|+|+||+ |++++++++++++.+.+        +.|++||
T Consensus       206 lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~~gK~l~gG~-~~~~~~~~~~~~~~~~~--------~~~g~T~  276 (387)
T d1vefa1         206 ITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGV-PLGVAVMREEVARSMPK--------GGHGTTF  276 (387)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTS-SCEEEEEEHHHHHTSCT--------TSSCCSS
T ss_pred             HHHHcCceEEecccccccCccCCCcccccCCcCCceeeecccCCCCc-cccccccceeeeecccc--------CCccccC
Confidence            34578999999999999999999999999999999   689999996 99999999999987753        6799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++.  ++.+.+|||.|+|++|+|.++.          ...+.
T Consensus       277 ~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~--~~~v~~vrg~Gl~~~ie~~~~~----------~~~~~  344 (387)
T d1vefa1         277 GGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP--SPKIREVRGMGLMVGLELKEKA----------APYIA  344 (387)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC--CTTEEEEEEETTEEEEEESSCS----------HHHHH
T ss_pred             CCCcchhhhcccchhhcccccccchHhhhhHHHHHHHHhcC--CCceEEEeecceEEEEEEeCCc----------hHHHH
Confidence            999 999999999 88876   8999999999999999884  5779999999999999996421          23467


Q ss_pred             HHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++++|+++.+++  +++++|+|||++   |++|||++++++
T Consensus       345 ~~~~~~g~l~~~~g--~~~ir~~Ppl~i---t~~~ld~~~~~i  382 (387)
T d1vefa1         345 RLEKEHRVLALQAG--PTVIRFLPPLVI---EKEDLERVVEAV  382 (387)
T ss_dssp             HHHHHHCEECEESS--TTEEEECCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHCCCeEEecC--CCEEEEECCccC---CHHHHHHHHHHH
Confidence            77889999988865  789999999999   589999999985

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.6e-33  Score=279.34  Aligned_cols=166  Identities=15%  Similarity=0.238  Sum_probs=145.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCc--ch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchh
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC--RF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLK   78 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~--PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T   78 (329)
                      ..+||+|||+|||||||||||++|++|++||.  ||   ++|+|+||++|.++++...              .+..|++|
T Consensus       278 c~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~gK~l~~g~~~~~~~~~~~--------------~~~~~~~T  343 (461)
T d1ohwa_         278 SRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPN--------------APYRIFNT  343 (461)
T ss_dssp             HHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEECGGGSSEEEEECGGGSCS--------------STTSSCCS
T ss_pred             HHhhCcceeccccccccccccccccccccccccCchhhhhhhcccccccccccccccc--------------cccccccc
Confidence            45789999999999999999999999999995  99   6899999985554433211              13679999


Q ss_pred             hhcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCC-ceeeEEeeceeeEEEeecCCCCCCCCChHHHHH
Q psy7882          79 ISDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFA-IVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTH  152 (329)
Q Consensus        79 ~agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p-~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~  152 (329)
                      |++| ++|++++++ +++++   ++|++++|++|.++|+++..+|| .+.+|||.|+|++|+|.+         .+...+
T Consensus       344 ~~g~p~~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~Gl~~~ie~~~---------~~~~~~  414 (461)
T d1ohwa_         344 WLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPD---------ESIRNK  414 (461)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSS---------HHHHHH
T ss_pred             cccccccchhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeeeeEEEEEEcCC---------HHHHHH
Confidence            9999 999999999 88876   89999999999999999999997 689999999999999953         356778


Q ss_pred             HHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++..|+++||++.+++  +++|||.|||+|   |++|||++++++
T Consensus       415 i~~~~~~~Gll~~~~~--~~~ir~~PpL~i---t~~eid~~~~~l  454 (461)
T d1ohwa_         415 LISIARNKGVMLGGCG--DKSIRFRPTLVF---RDHHAHLFLNIF  454 (461)
T ss_dssp             HHHHHHHTTEECEEET--TTEEECCCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHCCeEEeeCC--CCEEEEeCCcCC---CHHHHHHHHHHH
Confidence            9999999999999875  689999999999   489999999986

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.97  E-value=2.7e-31  Score=260.64  Aligned_cols=181  Identities=12%  Similarity=-0.006  Sum_probs=152.2

Q ss_pred             ccccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      +..+||+|||+||||||| |||.+|+++++||.||   ++|+|+||+ |+||+++++++++.+.+  .   ..+.|++||
T Consensus       228 lc~~~~~llI~DEv~tG~-r~g~~~~~~~~gi~PDi~~~gK~lggG~-p~~a~~~~~~i~~~~~~--~---~~~~~~~T~  300 (427)
T d2gsaa_         228 ITLEHDALLVFDEVMTGF-RIAYGGVQEKFGVTPDLTTLGKIIGGGL-PVGAYGGKREIMQLVAP--A---GPMYQAGTL  300 (427)
T ss_dssp             HHHHTTCEEEEECTTTBT-TTBTTCHHHHTTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTBTT--T---SSBCCCCTT
T ss_pred             HHHHhceeeeeccccccc-eecccchHHhcCCCHHHHhhhhccCCCc-ceeeeeehHHHHHHhcc--c---CCCcCCCCC
Confidence            345789999999999999 8899999999999999   689999995 99999999999998764  1   136799999


Q ss_pred             hcc-HHHHHHHHh-hHHhH---HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCC----CCCChHHH
Q psy7882          80 SDT-VRPHVQIKK-SVLER---FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETK----VPLNSRHM  150 (329)
Q Consensus        80 agn-lA~aaala~-~ile~---le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~----~p~~~~~~  150 (329)
                      ++| ++|++++++ +++++   +++++++|++|+++|+++.++++....+++.|.|+++.|..++...    ..-+.+..
T Consensus       301 ~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~~~ggm~~i~~~~~~v~~~~~~~~~d~~~~  380 (427)
T d2gsaa_         301 SGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKF  380 (427)
T ss_dssp             TTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHH
T ss_pred             CCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcCCCcEEcccCCeEEEEEeccCCCCHHHhhcccHHHH
Confidence            999 999999999 88876   7999999999999999999999998899999999999997543210    01123456


Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|+++||++.+.+. .   .+.||+++   |++|||++++++
T Consensus       381 ~~~~~~ll~~Gv~l~p~~~-~---~~~~~l~~---Te~dId~~l~al  420 (427)
T d2gsaa_         381 SRFHRGMLEQGIYLAPSQF-E---AGFTSLAH---TEEDIDATLAAA  420 (427)
T ss_dssp             HHHHHHHHHTTEECCSSTT-S---CEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEECCCCC-c---ceeCCCCC---CHHHHHHHHHHH
Confidence            7889999999999987542 1   24578876   689999999986

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=2.3e-11  Score=116.92  Aligned_cols=167  Identities=11%  Similarity=0.004  Sum_probs=110.1

Q ss_pred             ccccccceEEehhHhhchhccch--hhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           3 TTYYRDCGVVVSAVDFGSGDNGT--YLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGRTG~--~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      +..++|++||+||+++++ +.|.  .+.++++++.+|       ++|+++|  .+-|++.+++++++.+..        .
T Consensus       202 L~~~~~a~LivDeah~~g-~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg--~~Gg~v~g~~~~~~~l~~--------~  270 (401)
T d1fc4a_         202 LADKYDALVMVDDSHAVG-FVGENGRGSHEYCDVMGRVDIITGTLGKALGG--ASGGYTAARKEVVEWLRQ--------R  270 (401)
T ss_dssp             HHHHTTEEEEEECTTTTT-TSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS--SSCEEEEECHHHHHHHHH--------H
T ss_pred             HHhhcCcEEEehhhhccc-cccCCCCccchhccCCCCCeEEEeeccccccc--CCcccccCCHHHHHHHHc--------C
Confidence            345789999999999965 4332  356788898765       4699964  267889999999987653        1


Q ss_pred             ccchhhhcc---HHHHHHHHh-hHHhH----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCC
Q psy7882          74 AHKLKISDT---VRPHVQIKK-SVLER----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPL  145 (329)
Q Consensus        74 ~hg~T~agn---lA~aaala~-~ile~----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~  145 (329)
                      ..+..|+..   .+++++++. +.+.+    .+++++...+|++.+...-  .+..   ...+.++.|.+.+        
T Consensus       271 ~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g--~~~~---~~~~pIv~v~~~~--------  337 (401)
T d1fc4a_         271 SRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG--FTLA---GADHAIIPVMLGD--------  337 (401)
T ss_dssp             CHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT--CCBC---CSSSSEEEEEEEC--------
T ss_pred             ChhhhhcCCCCHHHHHHHHhhhcccccCHHHHHHHHHHHHHHHhhhcccC--CccC---CCCCCEEEEEECC--------
Confidence            223333333   334444444 44432    5778888888888777652  1111   1234555666643        


Q ss_pred             ChHHHHHHHHHHHHCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         146 NSRHMTHILDSCKEHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       146 ~~~~~~~~~~~l~e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+..+.+.|+++||++.+..+     +...||+.++...   |++|||++++++
T Consensus       338 -~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~h---T~edId~~v~al  390 (401)
T d1fc4a_         338 -AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAH---TPEQITRAVEAF  390 (401)
T ss_dssp             -HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHCCceEEeECCCCCCCCCceEEEEECCCC---CHHHHHHHHHHH
Confidence             24567789999999999875321     2345899887554   799999999985

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=98.81  E-value=3.4e-09  Score=100.70  Aligned_cols=165  Identities=10%  Similarity=-0.008  Sum_probs=101.7

Q ss_pred             cccccceEEehhHhhch--hccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           4 TYYRDCGVVVSAVDFGS--GDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGf--GRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      ...||++||+||+++..  |.+|. +.++++++.||     ++|+++.   +-|+++++.++.+.+..        ...+
T Consensus       193 ~~~~~~~livDeah~~gv~G~~g~-G~~~~~~~~~~~~~~t~~ka~g~---~Gg~v~~~~~~~~~l~~--------~~~~  260 (383)
T d1bs0a_         193 TQQHNGWLMVDDAHGTGVIGEQGR-GSCWLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQ--------FARH  260 (383)
T ss_dssp             HHHTTCEEEEECTTTTTTSSGGGC-CHHHHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHH--------HCHH
T ss_pred             HHhcCcEEEeecceeeeecCCccc-chHHHcCCccccccccccccccc---cccccccchhHHHHHHh--------hchh
Confidence            45679999999999855  44554 35689999999     4576653   56889999998887653        1112


Q ss_pred             hhhhc--c-HHHHHHHHh-hHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCC
Q psy7882          77 LKISD--T-VRPHVQIKK-SVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLN  146 (329)
Q Consensus        77 ~T~ag--n-lA~aaala~-~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~  146 (329)
                      ..|+.  . ..++++++. ++++.      .++..++..+++++|.++    +.. -+.+...++.|.+..         
T Consensus       261 ~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~----g~~-~~~~~s~Ii~v~~g~---------  326 (383)
T d1bs0a_         261 LIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL----PFT-LADSCSAIQPLIVGD---------  326 (383)
T ss_dssp             HHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS----SCE-ECSCCSSBCCEEEES---------
T ss_pred             hhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc----CCc-cCCCCCCEEEEEECC---------
Confidence            22222  2 334444444 44432      334445555555555432    321 112334455555542         


Q ss_pred             hHHHHHHHHHHHHCCceeeccC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         147 SRHMTHILDSCKEHGLLLGRGG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       147 ~~~~~~~~~~l~e~GVLl~~~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ++.+..+.+.|+++||++.+..     .+...+|+.+....   |++|||+++++.
T Consensus       327 ~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~h---t~edid~l~~~L  379 (383)
T d1bs0a_         327 NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAH---EMQDIDRLLEVL  379 (383)
T ss_dssp             HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCceEEEEcCCCCCCCCceEEEEeCCCC---CHHHHHHHHHHH
Confidence            3456778999999999987532     11345888776554   799999999975

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=98.70  E-value=5.3e-09  Score=100.55  Aligned_cols=182  Identities=9%  Similarity=-0.059  Sum_probs=104.1

Q ss_pred             cccccceEEehhHhh------chhccchhhhhcccCCcchH---H------HhhcCCccccceee-echh--HHHhhhhh
Q psy7882           4 TYYRDCGVVVSAVDF------GSGDNGTYLGFQCLQICRFV---Q------KDFKGSFWDKLIVH-TSTC--TFENFIKI   65 (329)
Q Consensus         4 ~~~~giLLI~DEVqT------GfGRTG~~fA~e~~GV~PDi---~------KaLgGG~~PigAv~-~~~e--I~d~~~~~   65 (329)
                      ..+||++||+||+++      +++|++.+|+.+.+++.||+   +      |.-++| .|.++++ ++++  +++.....
T Consensus       212 ~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~-~~~~g~l~~~~~~~~~~~~~~~  290 (465)
T d1ax4a_         212 AKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPL-LNIGGLVAIRDNEEIFTLARQR  290 (465)
T ss_dssp             HHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTC-CSSCEEEEESSCHHHHHHHHHH
T ss_pred             HHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeEeecccCcc-cccceeEeecchHHHHHhhhcc
Confidence            346899999999998      57788888888888888883   2      333444 3665444 4432  22222110


Q ss_pred             hhccCCCCccchhhhcc-HHHHHHHHh---hHHh-H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCC
Q psy7882          66 KYQILKTPAHKLKISDT-VRPHVQIKK---SVLE-R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDK  139 (329)
Q Consensus        66 ~~~~~~~~~hg~T~agn-lA~aaala~---~ile-~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~  139 (329)
                      ..    ...++.++++. ..+.++++.   +.+. + .++..+..++|.+.|+++  ..+.+...++.+++..++...+.
T Consensus       291 ~~----~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~  364 (465)
T d1ax4a_         291 CV----PMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA--GIPIQYPTGGHAVFVDCKKLVPQ  364 (465)
T ss_dssp             HH----HHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT--TCCBCSSCCSSEEEEESTTTCTT
T ss_pred             cc----ccccCCCcchhhHHHHHHHhhhhHHhhhHHHHHHHHHHHHHHHHHHHhh--cCccccCCCcceeeeehhhhcCC
Confidence            00    12344555554 333333222   2222 2 556667788888888875  35666677777766554432222


Q ss_pred             CCCCCCChHHHHHHHHHHHHCCceeeccC---------------CCCCEEEEe-CccccCcCCHHHHHHHHhcc
Q psy7882         140 ETKVPLNSRHMTHILDSCKEHGLLLGRGG---------------LSGNTLTAL-QPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       140 ~~~~p~~~~~~~~~~~~l~e~GVLl~~~G---------------~~~nvIrl~-PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+|  .........+.+.||.....+               ...+.+||. |+++.   |++|+|.+++++
T Consensus       365 ~~~~~~--~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~---T~eeiD~vv~~l  433 (465)
T d1ax4a_         365 IPGDQF--PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVY---TNDHMDYIADAL  433 (465)
T ss_dssp             SCGGGC--HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSS---CHHHHHHHHHHH
T ss_pred             Cccccc--hhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCC---CHHHHHHHHHHH
Confidence            111111  112233445567787643211               134689995 77776   689999999985

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=98.64  E-value=1.1e-07  Score=83.83  Aligned_cols=168  Identities=10%  Similarity=-0.053  Sum_probs=91.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      -.||++++.||+++|+++++..+........++     .++..++++ +.+............... ..    ...+.+.
T Consensus       165 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~----~~~~~~~  238 (345)
T d1v72a1         165 KSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVL-AAEAIVLFNTSLATEMSY-RR----KRAGHLS  238 (345)
T ss_dssp             HHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCS-SCEEEEESSGGGHHHHHH-HH----HHTTCCC
T ss_pred             HhcCceeeecccccceeccccccCHHHhhccccccccccCccccccc-cccccccchhhhhhhccc-cc----ccccccc
Confidence            367999999999999988887777776667666     235555543 444444443332222110 00    1112222


Q ss_pred             hcc-HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          80 SDT-VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        80 agn-lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      ... .+++++...  +..  .......-.++...+.+...+++.+.-.... +-+..+.+.              ..+.+
T Consensus       239 ~~~~~aa~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~~niv~~~~~--------------~~~~~  302 (345)
T d1v72a1         239 SKMRFLSAQIDAYLTDDL--WLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD--------------SAMID  302 (345)
T ss_dssp             SSTHHHHHHHHHHTSTTH--HHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC--------------HHHHH
T ss_pred             chhhHHhhhhHHHHHHhh--hhhhccchhhHHHHHHHHHHhcCCcEeccCCCccEEEEEcC--------------HHHHH
Confidence            222 222222221  111  2222222233333444444455544322222 223333332              13667


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+++|+.+.......+.+||++++..   |+||||.+++++
T Consensus       303 ~L~~~gi~v~~~~~~~~~lR~~~~~~~---T~edid~~le~l  341 (345)
T d1v72a1         303 ALLKAGFGFYHDRWGPNVVRFVTSFAT---TAEDVDHLLNQV  341 (345)
T ss_dssp             HHHHTTCBCBCSSSSTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHcCCCccccCCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence            899999988654445689999998777   589999999986

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.54  E-value=5.5e-08  Score=86.26  Aligned_cols=177  Identities=11%  Similarity=-0.016  Sum_probs=96.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch---HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccchhhhc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKISD   81 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~ag   81 (329)
                      .++|+++|.||+++++..++..+.........+   +.+.-+.|..+.+++.+..+.......  ..    ..++.++..
T Consensus       159 ~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~  232 (343)
T d1m6sa_         159 KEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARK--AR----KMLGGGMRQ  232 (343)
T ss_dssp             HHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHH--HH----HHHTCCCSS
T ss_pred             HhcCeEEEeccccccccccccccchhhhccccccccccccccccccccccccccHHHHhhhHh--hC----cccccccch
Confidence            467999999999999877655444333322222   233333333456777777766544332  10    011122222


Q ss_pred             c-HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHHHHH
Q psy7882          82 T-VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILDSCK  158 (329)
Q Consensus        82 n-lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~~l~  158 (329)
                      . ..+++....  ...+......+...++.+.+.++.... ....+  ..-++.+.+....        ....++...|.
T Consensus       233 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~v~~~~~~~~--------~~a~~l~~~L~  301 (343)
T d1m6sa_         233 AGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIGYSV-NPEDV--KTNMVILRTDNLK--------VNAHGFIEALR  301 (343)
T ss_dssp             THHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHHTCBC-CGGGC--CSSEEEEECTTSS--------SCHHHHHHHHH
T ss_pred             hHHHHHhhhhhhhhhHHHHHHHHHHHHHhhhHHHHhccCc-cCCCC--CceEEEEEeCCCc--------ccHHHHHHHHH
Confidence            2 111222111  111114445555566666666653211 11111  1234445443211        12456899999


Q ss_pred             HCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhccccchhhh
Q psy7882         159 EHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCESKGTFQS  204 (329)
Q Consensus       159 e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~~~~~~~~  204 (329)
                      ++||++++.+  .+.+|+.+++.+   |++|||++++++. ..+++
T Consensus       302 ~~Gi~v~~~~--~~~iRi~~~~~~---t~edid~~v~~l~-~v~~~  341 (343)
T d1m6sa_         302 NSGVLANAVS--DTEIRLVTHKDV---SRNDIEEALNIFE-KLFRK  341 (343)
T ss_dssp             HHTEECEEEE--TTEEEEECCTTS---CHHHHHHHHHHHH-HHHHH
T ss_pred             HCCCEEecCC--CCEEEEECCCCC---CHHHHHHHHHHHH-HHHHH
Confidence            9999998864  689999887766   6899999999863 34444

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=98.19  E-value=6.8e-06  Score=78.27  Aligned_cols=164  Identities=10%  Similarity=-0.024  Sum_probs=100.0

Q ss_pred             cccccceEEehhHhhchhc---cchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           4 TYYRDCGVVVSAVDFGSGD---NGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGR---TG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+|++.|++||... ||-   +|.. ..+++|+.++       ++|++|+.   =|.|++++++-+.+..        .
T Consensus       203 ~~~y~~~L~vDeAHs-~Gv~G~~G~G-~~~~~~~~~~~di~~gTlsKa~g~~---Gg~v~~~~~~i~~l~~--------~  269 (396)
T d2bwna1         203 AEEFGALTYIDEVHA-VGMYGPRGAG-VAERDGLMHRIDIFNGTLAKAYGVF---GGYIAASARMVDAVRS--------Y  269 (396)
T ss_dssp             HHHHTCEEEEECTTT-TTTSSTTSCC-HHHHHTCGGGCSEEEEESSSTTCSC---CEEEEECHHHHHHHHH--------H
T ss_pred             hhhhcceeeecccee-eeeecccccc-chhhcCCceeeeeeeeccccccccc---ccccchhHHHHHHHHh--------h
Confidence            346799999999875 554   4443 4577888765       56999764   3678888888877653        2


Q ss_pred             ccchhhhcc--HHHHH-HHHh-hHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC
Q psy7882          74 AHKLKISDT--VRPHV-QIKK-SVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV  143 (329)
Q Consensus        74 ~hg~T~agn--lA~aa-ala~-~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~  143 (329)
                      ..+..|++.  .++++ +++. +++..      ..+......+++++|..+  .++...   ....++.|.+.+      
T Consensus       270 ~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~--g~~~~~---~~spIvpv~ig~------  338 (396)
T d2bwna1         270 APGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL--GMPIID---HGSHIVPVVIGD------  338 (396)
T ss_dssp             CHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH--TCCBCC---CSSSCEEEECCC------
T ss_pred             cchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc--CCCcCC---CCCCEEEEEeCC------
Confidence            334455555  23333 2333 44432      234445566777776654  222221   123455666542      


Q ss_pred             CCChHHHHHHHHHHH-HCCceeeccCC-----CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         144 PLNSRHMTHILDSCK-EHGLLLGRGGL-----SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       144 p~~~~~~~~~~~~l~-e~GVLl~~~G~-----~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                         +..+..+.+.++ ++|+++.+..+     +...+|+..   ...||++|||++++++
T Consensus       339 ---~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l---sa~ht~edId~l~~~L  392 (396)
T d2bwna1         339 ---PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTP---SPVHDLKQIDGLVHAM  392 (396)
T ss_dssp             ---HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECC---CTTSCHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEe---CccCCHHHHHHHHHHH
Confidence               245566777765 68999876321     235688864   4567899999999885

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=1.7e-05  Score=75.67  Aligned_cols=182  Identities=10%  Similarity=-0.015  Sum_probs=88.4

Q ss_pred             cccccceEEehhHhhc---hhccchhhhhcccCC---cchH-----------HHhhcCCccccceeeec-h-hHHHhhhh
Q psy7882           4 TYYRDCGVVVSAVDFG---SGDNGTYLGFQCLQI---CRFV-----------QKDFKGSFWDKLIVHTS-T-CTFENFIK   64 (329)
Q Consensus         4 ~~~~giLLI~DEVqTG---fGRTG~~fA~e~~GV---~PDi-----------~KaLgGG~~PigAv~~~-~-eI~d~~~~   64 (329)
                      ...||++||+||++..   .++++..+.+...++   .+|+           .|++++   |.|++++. + .++.....
T Consensus       213 a~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~---~~gg~i~~~~~~~~~~~~~  289 (467)
T d2v1pa1         213 AKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMV---PMGGLLCMKDDSFFDVYTE  289 (467)
T ss_dssp             HHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCC---SSCEEEEECSGGGHHHHHH
T ss_pred             HHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCC---CCceeEEecchhhhhHHHh
Confidence            4578999999999862   223333444444443   3441           144433   66655543 3 33332221


Q ss_pred             hhhccCCCCccchhhhcc-HHHHHHHHh--hHH--hH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecC
Q psy7882          65 IKYQILKTPAHKLKISDT-VRPHVQIKK--SVL--ER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQD  138 (329)
Q Consensus        65 ~~~~~~~~~~hg~T~agn-lA~aaala~--~il--e~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d  138 (329)
                      .... .....|+.++.+. .+++++.+.  ...  ++ +++..+.+++|.++|.+..   ..+...++.+........-.
T Consensus       290 ~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~~~~~~~~~~~~~~~~~  365 (467)
T d2v1pa1         290 CRTL-CVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIG---VVCQQAGGHAAFVDAGKLLP  365 (467)
T ss_dssp             HHHH-HHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTT---CCEEEECSSCEEEEHHHHST
T ss_pred             hccc-ccccccCcchhhhHHHHHHHHHHHhHHhhhHHHHHHHHHHHHHHHHHHHhcC---CcccCCCccceeecchhhcC
Confidence            0000 0112344555555 444333332  211  12 6677888888988887742   23444444443332221111


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccC---------------CCCCEEEEeCc-cccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGG---------------LSGNTLTALQP-KLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G---------------~~~nvIrl~PP-L~It~~t~eeId~~l~~~  197 (329)
                      ......+  .........+.+.||.....+               ...+.+||.+| .+.   |++|||.+++++
T Consensus       366 ~~~~~~~--~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~---T~eeiD~vv~~l  435 (467)
T d2v1pa1         366 HIPADQF--PAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATY---TQTHMDFIIEAF  435 (467)
T ss_dssp             TSCGGGC--HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTC---CHHHHHHHHHHH
T ss_pred             Ccchhhh--hhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCC---CHHHHHHHHHHH
Confidence            1111111  112223444556676432110               13578999765 444   689999999875

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=97.56  E-value=0.0002  Score=65.36  Aligned_cols=172  Identities=9%  Similarity=-0.023  Sum_probs=97.5

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccC----CCC---
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL----KTP---   73 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~----~~~---   73 (329)
                      +.++++++|.++. +|..    ....-...+|+     -|.+++.. .+|++.++++..+.+.+...+..    ...   
T Consensus       177 ~~~~~~~vD~~~~-~g~~----~~~~~~~~~D~~~~s~~K~~~~p~-G~g~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~  250 (381)
T d1elua_         177 NYPVRVLVDGAQS-AGSL----PLDFSRLEVDYYAFTGHKWFAGPA-GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEP  250 (381)
T ss_dssp             SSCCEEEEECTTT-BTTB----CCCTTTSCCSEEEEESSSTTCCCT-TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCE
T ss_pred             ccccccccccccc-cccc----cccccccccccccccccccccccc-hhhHHHhhHHHHHhcCccccccccccccccccc
Confidence            3579999999876 4322    12223345772     29887763 67888888887765432000000    000   


Q ss_pred             ---------ccchhhhcc--HHHHHHHHh-hH---HhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeec
Q psy7882          74 ---------AHKLKISDT--VRPHVQIKK-SV---LER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQ  137 (329)
Q Consensus        74 ---------~hg~T~agn--lA~aaala~-~i---le~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~  137 (329)
                               ...+|....  ++..++++- ..   .+. .++..++.+++.++|+++-. ...+..-.-.+.++.+.+..
T Consensus       251 ~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~vsf~~~~  329 (381)
T d1elua_         251 TGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPH-VHCLATSAPQAGLVSFTVDS  329 (381)
T ss_dssp             EEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTT-EEESCSSCCSSSEEEEEECS
T ss_pred             ccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCC-eEecCCCCccccEEEEEcCC
Confidence                     011122111  334444432 11   122 56777788888888877621 01111112245566666532


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         138 DKETKVPLNSRHMTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       138 d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..         ....+.+.|.++||.++..+ .++.+|+++.+..   |++|||.+++++
T Consensus       330 ~~---------~~~~i~~~L~~~gi~v~~~~-~~~~lRis~~~~n---t~edid~ll~~l  376 (381)
T d1elua_         330 PL---------GHRAIVQKLEEQRIYLRTIA-DPDCIRACCHYIT---DEEEINHLLARL  376 (381)
T ss_dssp             SS---------CHHHHHHHHHHTTEECEEET-TTTEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             CC---------CHHHHHHHHHhCCcEEEecC-CCCEEEEecCCCC---CHHHHHHHHHHH
Confidence            11         13457788999999987665 4689999987654   689999999985

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=97.46  E-value=0.00096  Score=60.40  Aligned_cols=160  Identities=8%  Similarity=-0.002  Sum_probs=89.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHh-hhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFEN-FIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~-~~~~~~~~~~~~~hg   76 (329)
                      .+|++++|.||+...|...+..... ...-.+.      ++|+++ .|+ -+|.++++.+.... +..          +.
T Consensus       174 ~~~~~~li~De~y~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~l~Gl-R~G~~i~~~~~~~~~~~~----------~~  241 (355)
T d1lc5a_         174 KSLNINLILDEAFIDFIPHETGFIP-ALKDNPHIWVLRSLTKFYAIPGL-RLGYLVNSDDAAMARMRR----------QQ  241 (355)
T ss_dssp             HHHTCEEEEECTTGGGSTTCCCSGG-GCTTCTTEEEEEESTTTTTCTTT-CCEEEECCCHHHHHHHHH----------HS
T ss_pred             cccccccccccceeeeeeecccccc-cccccccceeecccccccccccc-cccceeccchhhhHHHHh----------hc
Confidence            4679999999999887654432111 1111222      579987 674 78988887654433 331          11


Q ss_pred             hhhhcc-HHHHHHH---Hh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHH
Q psy7882          77 LKISDT-VRPHVQI---KK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        77 ~T~agn-lA~aaal---a~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      .++..+ ++..++.   .. +.+.+ .++.++.-+++.+.|.++    +.+.-.-+-|.++-+.+..+.           
T Consensus       242 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~p~~~~f~~~~~~~~~-----------  306 (355)
T d1lc5a_         242 MPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQL----PLLTVYPGRANYLLLRCERED-----------  306 (355)
T ss_dssp             CTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTS----TTEEECCCSSSEEEEEESCTT-----------
T ss_pred             CCccccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhc----CCcEECCCCCEEEEEECCCCH-----------
Confidence            223333 3333333   32 33333 444555555555555443    333222234555556654221           


Q ss_pred             HHHHHHHHHCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||+++++.    ...+.+||.    +.  +++|++.+++++
T Consensus       307 ~~~~~~L~~~gv~vr~~~~f~~~~~~~iRis----~~--~~~e~~~li~aL  351 (355)
T d1lc5a_         307 IDLQRRLLTQRILIRSCANYPGLDSRYYRVA----IR--SAAQNERLLAAL  351 (355)
T ss_dssp             CCHHHHHHTTTEECEECTTSTTCCTTEEEEE----CC--CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCcEEEeCccCCCCCCCEEEEE----eC--CHHHHHHHHHHH
Confidence            126778899999998753    235789985    22  578999998874

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=97.36  E-value=0.00077  Score=62.04  Aligned_cols=172  Identities=10%  Similarity=-0.053  Sum_probs=89.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|.||+...+...|.....-..--.++       ++|.++.| +.+|.+++++++.+.+......   .....+
T Consensus       201 ~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~RiG~~i~~~~~i~~~~~~~~~---~~~~~~  276 (403)
T d1wsta1         201 NEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPG-FRIGWVAAHPHLIRKMEIAKQS---IDLCTN  276 (403)
T ss_dssp             HHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHHHHHH---HHSSCC
T ss_pred             HhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceecCc-ccccccccchHHHHHHHHHHhh---hccccc
Confidence            468999999999987754443211100000122       57999878 4999999999988766530000   001111


Q ss_pred             hhhccHHHHHHHHhhHHhH-HHHH----HHHHHHHHHHHHHHHHhCCc-eeeEEe-eceeeEEEeecCCCCCCCCChHHH
Q psy7882          78 KISDTVRPHVQIKKSVLER-FVHT----YVVGNFLLTHLSKLREEFAI-VGDVRG-KGLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        78 T~agnlA~aaala~~ile~-le~v----~~lG~~L~~gL~eL~~~~p~-v~~VRG-~GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +... .+.++.+.....++ ++++    ...-+.+.+.|.+.   .+. +..... -|+++.+++.+..      +   .
T Consensus       277 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~~~p~gg~~~~~~~~~~~------~---~  343 (403)
T d1wsta1         277 TFGQ-AIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEY---MPEGVEWTKPEGGMFVRVTLPEGI------D---T  343 (403)
T ss_dssp             HHHH-HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCTTCEECCCSBSSEEEEECCTTC------C---T
T ss_pred             cchh-hhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhh---ccCCeEEeCCCceeEEEEECCCCC------C---H
Confidence            1111 11222222222222 2222    23333333333332   222 222222 2667777774321      1   1


Q ss_pred             HHHHHHHHHCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++.|+.      ...+.+||....    .+++++++.++..
T Consensus       344 ~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~----~~~~~l~~al~rl  392 (403)
T d1wsta1         344 KLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTY----VPEETIREGVRRL  392 (403)
T ss_dssp             TTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS----SCHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEecC----CCHHHHHHHHHHH
Confidence            236778899999998742      124689987532    2578999998874

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.0018  Score=59.33  Aligned_cols=172  Identities=9%  Similarity=-0.055  Sum_probs=91.1

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+||+++|.||+...+...|.....  ..+.||       ++|.++ .|+ -+|.+++.+++.+.+......   ...++
T Consensus       194 ~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~~~i~~~s~SK~~~~~Gl-R~G~~~~~~~~i~~~~~~~~~---~~~~~  267 (382)
T d1b5pa_         194 VEHDFYLVSDEIYEHLLYEGEHFSP--GRVAPEHTLTVNGAAKAFAMTGW-RIGYACGPKEVIKAMASVSRQ---STTSP  267 (382)
T ss_dssp             HHTTCEEEEECTTTTCBSSSCCCCG--GGTCTTTEEEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHT---TTCSC
T ss_pred             HHcCeEEEEEccccceecCCCCCCH--HHcCCCCEEEEecchhhccCcHh-heEEEEECHHHHHHHHHHHHh---cccCc
Confidence            4679999999999988555543322  224456       569987 664 789999999988776531011   01122


Q ss_pred             hhhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHHHH
Q psy7882          77 LKISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMTHI  153 (329)
Q Consensus        77 ~T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~~~  153 (329)
                      +.... .+.++++.. ...+. ++..++.-+..++.+.+.....+. .-+... |.++-+++.+...     +   ...+
T Consensus       268 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~p~gg~~~~~~~~~~~~-----~---~~~~  337 (382)
T d1b5pa_         268 DTIAQ-WATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGL-KAVRPSGAFYVLMDTSPIAP-----D---EVRA  337 (382)
T ss_dssp             CHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCSBTTEEEEECTTTCS-----S---HHHH
T ss_pred             ccccc-cccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCC-eEecCCceEEEeEeCCCCCC-----C---HHHH
Confidence            22211 222222222 22222 222222222222223232223332 122233 5666666643110     1   2346


Q ss_pred             HHHHHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         154 LDSCKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       154 ~~~l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+.+.++||++.|...  ..+.+|+.  +..   ++++|++.++..
T Consensus       338 ~~~l~e~gV~v~PG~~F~~~~~iRis--~~~---~~e~l~~al~rl  378 (382)
T d1b5pa_         338 AERLLEAGVAVVPGTDFAAFGHVRLS--YAT---SEENLRKALERF  378 (382)
T ss_dssp             HHHHHHTTEECEESGGGTCTTEEEEE--CCS---CHHHHHHHHHHG
T ss_pred             HHHHHHCCEEEEeCcccCCCCeEEEE--EcC---CHHHHHHHHHHH
Confidence            7788899999988421  24678875  222   578899888864

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=97.19  E-value=0.0022  Score=59.63  Aligned_cols=170  Identities=9%  Similarity=-0.068  Sum_probs=91.7

Q ss_pred             ccccccceEEehhHhhchhc-cchhhhhcccCCcch-----HHHhhcCCccccceeeechh-HHHhhhhhhhccCCCCcc
Q psy7882           3 TTYYRDCGVVVSAVDFGSGD-NGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILKTPAH   75 (329)
Q Consensus         3 ~~~~~giLLI~DEVqTGfGR-TG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~~~~h   75 (329)
                      +...+|++||+|+.+.++.. .+. +.........|     ..|.++++. ..+++..+.+ +.+.+..        ...
T Consensus       236 ~~~~~~~~l~vD~a~g~~~~~~~~-~~~~~~~~~~D~~~~s~hK~l~~~~-g~~~~~~~~~~~~~~~~~--------~~~  305 (434)
T d2z67a1         236 ICENYDIPHIINGAYAIQNNYYLE-KLKKAFKYRVDAVVSSSDKNLLTPI-GGGLVYSTDAEFIKEISL--------SYP  305 (434)
T ss_dssp             HHHHHTCCEEEECTTTTTCHHHHH-HHHHHHTSCCSEEEEEHHHHHCCCS-SCEEEEESCHHHHHHHHT--------TSC
T ss_pred             HHHHhCCeEEEeccchhhhhhccc-cccccccCCcceEEEcCccccccCC-CccccccCcHHHHHHHHh--------hcc
Confidence            34578999999999864321 111 11111122345     459998764 6677776654 3333332        222


Q ss_pred             chhhhcc-HHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDT-VRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agn-lA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +.+.... ..+.+++..   +-+++ .++..++.+++.+.|+++...+.. +.+..... ...+.+..+           
T Consensus       306 ~~~~~~~~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~~~L~~l~~~~g~~ll~~~~~~-~~~~~~~~~-----------  373 (434)
T d2z67a1         306 GRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPI-ASCISVNSD-----------  373 (434)
T ss_dssp             SCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCCCSS-EEEEECSSC-----------
T ss_pred             cccccchHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhhhcCceecCCCCCc-eeeeecCCC-----------
Confidence            2232323 333233222   22333 677888889999999998766542 22222111 122222211           


Q ss_pred             HHHHHHHHHHCCceeecc------------C-CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRG------------G-LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~------------G-~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+...+.++||.....            + ...+.+++...+-.   |++|||.+++++
T Consensus       374 ~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~---T~edID~~i~~L  431 (434)
T d2z67a1         374 PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGV---RTEDIVNSVSKL  431 (434)
T ss_dssp             HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEEecCCCC---CHHHHHHHHHHH
Confidence            234677888999854210            0 12466776655443   799999999875

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.18  E-value=0.0034  Score=56.44  Aligned_cols=157  Identities=9%  Similarity=0.004  Sum_probs=90.9

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      .+++++|.||+.-.+.-......    ...+|       ++|.++ .| +-+|.+++++++.+.+..  ..   ...+.+
T Consensus       165 ~~~~~ii~Dd~~~~~~~~~~~~~----~~~~~~~i~~~S~SK~~~~~G-~R~G~~~~~~~~i~~l~~--~~---~~~~~s  234 (334)
T d2f8ja1         165 KTGAFVALDEAYYEFHGESYVDF----LKKYENLAVIRTFSKAFSLAA-QRVGYVVASEKFIDAYNR--VR---LPFNVS  234 (334)
T ss_dssp             TTTCEEEEECTTGGGTCCCCGGG----GGTCSSEEEEEESTTTSSCTT-TCEEEEEECHHHHHHHHH--HS---CTTCSC
T ss_pred             cceeEEeecccchhhcccccccc----cccCceEEEEecCccccchhh-hhhhhcccchHHHHHHHH--hh---cccccc
Confidence            46899999999866533222111    12233       569877 66 589999999999988764  11   112222


Q ss_pred             hhhccHHHHHHHHh-hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCCCCChHHHHHHHH
Q psy7882          78 KISDTVRPHVQIKK-SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHILD  155 (329)
Q Consensus        78 T~agnlA~aaala~-~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~~  155 (329)
                      +++. .+..+.+.. +.+++ .+...+.-++|.+.|+++    +. .-+...|.++-+.+..          .-...+.+
T Consensus       235 ~~~~-~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~-~~~~~~g~f~~~~~~~----------~~~~~~~~  298 (334)
T d2f8ja1         235 YVSQ-MFAKVALDHREIFEERTKFIVEERERMKSALREM----GY-RITDSRGNFVFVFMEK----------EEKERLLE  298 (334)
T ss_dssp             HHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH----TC-EECCCCSSEEEEECCH----------HHHHHHHH
T ss_pred             hhhh-hhcccccccccchhhHHHHHHHHHHHHHHHHHHC----CC-eECCCCceEEEEECCC----------CCHHHHHH
Confidence            3222 222233333 44443 344444445555555543    32 1123445554444432          23466889


Q ss_pred             HHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         156 SCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       156 ~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|.++||+++++   .+.+|+.    +.  +.+|.+++++++
T Consensus       299 ~L~~~GI~vr~~---~~~vRis----~g--~~ee~~~l~~~l  331 (334)
T d2f8ja1         299 HLRTKNVAVRSF---REGVRIT----IG--KREENDMILREL  331 (334)
T ss_dssp             HHHHTTEECEEE---TTEEEEE----CC--CHHHHHHHHHHH
T ss_pred             HHHHCCCEECCC---CCeEEEE----cC--CHHHHHHHHHHH
Confidence            999999999864   5789985    32  578888888764

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.0055  Score=55.31  Aligned_cols=160  Identities=11%  Similarity=0.073  Sum_probs=86.7

Q ss_pred             ccceEEehhHhhchhccchhhhhcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccchhh
Q psy7882           7 RDCGVVVSAVDFGSGDNGTYLGFQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKLKI   79 (329)
Q Consensus         7 ~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~T~   79 (329)
                      ++.++|+||...-|..-..  ........+.      ++|.++ .| +-+|.+++++++.+.+..  ..   .....++.
T Consensus       175 ~~~~~iidd~~~~f~~~~~--~~~~~~~~~~~iv~~S~SK~~~laG-lRiGy~i~~~~~i~~l~~--~~---~~~~~~~~  246 (354)
T d1fg7a_         175 GKAIVVADEAYIEFCPQAS--LAGWLAEYPHLAILRTLSKAFALAG-LRCGFTLANEEVINLLMK--VI---APYPLSTP  246 (354)
T ss_dssp             TTCEEEEECTTGGGSGGGC--SGGGTTTCTTEEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHH--HS---CSSCSCHH
T ss_pred             ccccccccccchhhccccc--cchhhcccccceEEeCCccccCCCc-cccccccccchhhhhhhh--hc---CccchhhH
Confidence            4677888887766632211  1111122222      579987 67 489999999999988764  11   01111222


Q ss_pred             hccHHHHHHHHh---hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          80 SDTVRPHVQIKK---SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        80 agnlA~aaala~---~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +...+. +++..   +.+.. ++++.+.-+++.+.+.+    .+.+..+. .-|.++-+++.+            ...+.
T Consensus       247 ~~~~a~-~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~----~~~~~~~~p~~~~f~~~~~~~------------~~~~~  309 (354)
T d1fg7a_         247 VADIAA-QALSPQGIVAMRERVAQIIAEREYLIAALKE----IPCVEQVFDSETNYILARFKA------------SSAVF  309 (354)
T ss_dssp             HHHHHH-HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----STTEEEECCCSSSEEEEEETT------------HHHHH
T ss_pred             HHHHHH-HHHhhhccccccccchhhhhHHHHHHHHHHh----CCCcceeCCCCceEEEEeCCC------------HHHHH
Confidence            222111 11111   11111 33333333444444443    34443443 345555555531            24578


Q ss_pred             HHHHHCCceeeccCC---CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGRGGL---SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~~G~---~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.|.++||++++++.   .++.+|+.    +.  +.+|.+.+++++
T Consensus       310 ~~L~~~gIlvr~~~~~~~~~~~lRis----ig--t~ee~~~~l~aL  349 (354)
T d1fg7a_         310 KSLWDQGIILRDQNKQPSLSGCLRIT----VG--TREESQRVIDAL  349 (354)
T ss_dssp             HHHHHTTEECEECTTSTTCTTEEEEE----CC--CHHHHHHHHHHH
T ss_pred             HHHHHCCcEEecCCCCCCCCCEEEEE----eC--CHHHHHHHHHHH
Confidence            889999999987642   25788975    32  578999998875

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=96.89  E-value=0.0014  Score=60.75  Aligned_cols=174  Identities=13%  Similarity=-0.025  Sum_probs=95.9

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..|++++|.||+...+...|.........-.|+       +.|...-| +-+|.+++.+++.+.+.....     ....+
T Consensus       213 ~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~~G-~RiG~~~~~~~~i~~l~~~~~-----~~~~~  286 (420)
T d1vp4a_         213 EKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQAKQ-----SADLC  286 (420)
T ss_dssp             HHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHHHHH-----HHHSS
T ss_pred             hcccccccccchhhhccccCcccccccccccccceeEEeccccccccc-cccccccccchhhhhhhhhhh-----hcccc
Confidence            468999999999987754442211111111233       34777777 489999999999887764100     00111


Q ss_pred             hhhcc-HHHHHHHHh-hHHh---H-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882          78 KISDT-VRPHVQIKK-SVLE---R-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        78 T~agn-lA~aaala~-~ile---~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +.+.. .+++..++. ...+   + .+..++.-+.+.+.|++.....+.+.-+... |+++-+++.+..      +   .
T Consensus       287 ~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~~~~~------d---~  357 (420)
T d1vp4a_         287 SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF------D---T  357 (420)
T ss_dssp             CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC------C---T
T ss_pred             CchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEECCCCC------C---H
Confidence            11111 233333443 2222   2 3445555566666676665444444333344 456667764311      1   1


Q ss_pred             HHHHHHHHHCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++.|..      ...+.+|+.-.  .  .+++++.+.++..
T Consensus       358 ~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~--~--~~~e~l~~a~~rL  406 (420)
T d1vp4a_         358 WEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFC--L--PPDEKIVEGIKRL  406 (420)
T ss_dssp             TTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECS--S--SCHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeC--c--CCHHHHHHHHHHH
Confidence            125667889999998741      12457898632  1  2578888888864

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=96.53  E-value=0.00034  Score=59.63  Aligned_cols=33  Identities=0%  Similarity=-0.218  Sum_probs=23.8

Q ss_pred             CCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         160 HGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       160 ~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .|+...+.  ....+||++.+..   |++|||++++++
T Consensus       305 ~~~~~~~~--~~~~vR~s~~~~~---t~edid~~l~~l  337 (340)
T d1svva_         305 YTVEPLKD--GTCIMRLCTSWAT---EEKECHRFVEVL  337 (340)
T ss_dssp             EEEEEETT--TEEEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             hcccccCC--CCcEEEEECCCCC---CHHHHHHHHHHH
Confidence            34444433  3578999988766   689999999975

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.53  E-value=0.0061  Score=55.33  Aligned_cols=170  Identities=12%  Similarity=0.037  Sum_probs=85.2

Q ss_pred             ccccceEEehhHhhchhccch-hhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGT-YLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~-~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|.||+...|...+. ......+.-.+|       ++|.++ .|+ -+|.+++.+++.+.+..  ... .....
T Consensus       189 ~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~ii~~~~~~~~~~~--~~~-~~~~~  264 (388)
T d1gdea_         189 VEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGW-RLGFVAAPSWIIERMVK--FQM-YNATC  264 (388)
T ss_dssp             HHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGG-CCEEEECCHHHHHHHHH--HHH-TTTCS
T ss_pred             HHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccc-cEEEEEeeccchhhhhh--ccc-ccccc
Confidence            357999999999887743332 112222222344       579987 674 89999999988876653  110 00111


Q ss_pred             chhhhccHHHHHHHHh-hHHhHH----HHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHH
Q psy7882          76 KLKISDTVRPHVQIKK-SVLERF----VHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        76 g~T~agnlA~aaala~-~ile~l----e~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .++... .++++++.. +..+.+    .+.++.-..+.+.|    ...+. ..+... |.++-+++....     .+   
T Consensus       265 ~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~-~~~~p~gg~fl~~~l~~~~-----~~---  330 (388)
T d1gdea_         265 PVTFIQ-YAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL----NEMGL-PTVKPKGAFYIFPRIRDTG-----LT---  330 (388)
T ss_dssp             CCHHHH-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH----HHTTC-CCCCCCBTTEECCBCGGGT-----CC---
T ss_pred             ccccch-hhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhh----hhccc-cccCCCceEEEEEECCCCC-----CC---
Confidence            111111 233444444 222211    12222222222222    23332 122333 455555553211     11   


Q ss_pred             HHHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+...++ ++||++.|+.    ...+.+|+.  +..   +++++++.++..
T Consensus       331 ~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis--~~~---~~e~l~~al~rL  378 (388)
T d1gdea_         331 SKKFSELMLKEARVAVVPGSAFGKAGEGYVRIS--YAT---AYEKLEEAMDRM  378 (388)
T ss_dssp             HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEE--CCS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEEechhhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence            234555554 6799998742    124678875  222   578888888864

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=96.43  E-value=0.019  Score=51.51  Aligned_cols=164  Identities=8%  Similarity=-0.102  Sum_probs=83.7

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechhHHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..||+++|.||+...+...........  ..+|       ++|..+...+.+|.+.+.+++.+.+......   ...+++
T Consensus       182 ~~~~i~ii~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~~~---~~~~~~  256 (368)
T d1v2da_         182 RAHDLFLISDEVYDELYYGERPRRLRE--FAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQW---TSFSAP  256 (368)
T ss_dssp             HHTTCEEEEECTTTTCBSSSCCCCHHH--HCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHH---HTSSCC
T ss_pred             HHcCCeeeechhhhhhccccccccccc--ccccccceeecccccccccccccccccccccccchhhhhhhc---cccccc
Confidence            467999999998865433322111111  1122       4565544335789999999888766531000   011222


Q ss_pred             hhhccHHHHHHHHh----hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHH
Q psy7882          78 KISDTVRPHVQIKK----SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        78 T~agnlA~aaala~----~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      +... .+.+++++.    +.+++ .+..++.-+++.+.|++    ++. .-+... |.++-+.+..       ++     
T Consensus       257 ~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~-~~~~p~g~~~~~~~l~~-------~~-----  318 (368)
T d1v2da_         257 TPLQ-AGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA----MGL-RVYVPEGTYFLMAELPG-------WD-----  318 (368)
T ss_dssp             HHHH-HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH----TTC-CEECCSBSSEEEEECTT-------CC-----
T ss_pred             cccc-cccccccccccchhhHHHHHHHHHHhhhhhhhhHHh----cCc-EEecCCceeEEEEeCCc-------cH-----
Confidence            2221 122233332    22222 23344444455555543    332 223344 4555555521       11     


Q ss_pred             HHHHHHHHCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDSCKEHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~l~e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..+.+.++||++.|+.      ...+.+|+.  +..   +++++++.++..
T Consensus       319 -~~~ll~~~gI~v~pg~~F~~~~~~~~~iRis--~~~---~~e~i~~ai~rL  364 (368)
T d1v2da_         319 -AFRLVEEARVALIPASAFYLEDPPKDLFRFA--FCK---TEEELHLALERL  364 (368)
T ss_dssp             -HHHHHHHTCEECEEGGGGCSSSCCTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             -HHHHHHhCCEEEEechhhCCCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence             2234668999998731      235789985  332   578999999864

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=96.37  E-value=0.026  Score=52.27  Aligned_cols=175  Identities=9%  Similarity=-0.064  Sum_probs=85.4

Q ss_pred             ccccceEEehhHhhchhccchhh----hh----cccCCcch-------HHHhhc-CCccccceeeec-hhHHHhhhhhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL----GF----QCLQICRF-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKY   67 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f----A~----e~~GV~PD-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~   67 (329)
                      ..||+++|.||+...+-..|.-+    ..    ......+|       ++|.++ .| +-+|.+.+. +.+.+.+..  .
T Consensus       218 ~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G-lRiG~~~~~~~~l~~~~~~--~  294 (428)
T d1iaya_         218 NQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARK--M  294 (428)
T ss_dssp             HTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHH--H
T ss_pred             ccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCCC-cccccccccccchhhhhhh--h
Confidence            46899999999998764333211    00    11122344       469875 45 478888774 456555442  1


Q ss_pred             ccCCCCccchhhhccHHHHHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCC
Q psy7882          68 QILKTPAHKLKISDTVRPHVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKET  141 (329)
Q Consensus        68 ~~~~~~~hg~T~agnlA~aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~  141 (329)
                      .   .+...++.. ..++++.+.. +.+++     .+..++.-+.+.+.|+    ..++....-.-|+++-+++......
T Consensus       295 ~---~~~~~~~~~-~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~----~~gi~~~~p~gg~f~w~~l~~~~~~  366 (428)
T d1iaya_         295 S---SFGLVSTQT-QYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLE----VVGIKCLKNNAGLFCWMDLRPLLRE  366 (428)
T ss_dssp             H---TTSCCCHHH-HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTTCCBCCCSSSSEEEEECGGGCSS
T ss_pred             h---ccccccccc-ccchhhhhhhhccccccccccccccchhHHHHHHHHH----hCCCEEecCCcceEEEEECcccccc
Confidence            1   011111111 1223333332 33332     2223333334444443    3332111122377777887532110


Q ss_pred             CCCCChHHHHHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         142 KVPLNSRHMTHILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       142 ~~p~~~~~~~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       .  ...-...+++.++ ++||++.|+.    ..++.+|+.  +  ...++++|++.|+..
T Consensus       367 -~--~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris--~--a~~~~~~l~~al~Rl  420 (428)
T d1iaya_         367 -S--TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVC--F--ANMDDGTVDIALARI  420 (428)
T ss_dssp             -S--SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEE--C--SSSCHHHHHHHHHHH
T ss_pred             -C--CCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEE--e--CCCCHHHHHHHHHHH
Confidence             0  1122345666666 4699998742    235778875  2  222567888888753

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=96.21  E-value=0.034  Score=51.14  Aligned_cols=171  Identities=8%  Similarity=-0.076  Sum_probs=91.2

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCC------
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT------   72 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~------   72 (329)
                      ..++|+++|+|=+|. +|..    ..+.-...+|+     -|- .|+. .+|++..+++......+ ....+..      
T Consensus       189 ~~~~g~~~ivDa~q~-~g~~----~id~~~~~~D~~~~s~hK~-~gp~-G~g~l~v~~~~~~~~~p-~~~g~~~~~~~~~  260 (408)
T d1t3ia_         189 AHQAGAKVLVDACQS-APHY----PLDVQLIDCDWLVASGHKM-CAPT-GIGFLYGKEEILEAMPP-FFGGGEMIAEVFF  260 (408)
T ss_dssp             HHHTTCEEEEECTTT-TTTS----CCCHHHHTCSEEEEEGGGT-TSCT-TCEEEEECHHHHHHSCC-CSCSTTSEEEECS
T ss_pred             hhccCceeeecccee-cccc----cccccccCCceEEeccccc-cCCC-CccccccchhhhhcCCc-eecCCcccccccc
Confidence            356789999998876 4322    11211233572     285 4442 57999999988754321 0000000      


Q ss_pred             ----------CccchhhhccHHHHHHHHh--hHHhH--HHHHHHHHHHHHHHHHHHHHhCCceeeE------EeeceeeE
Q psy7882          73 ----------PAHKLKISDTVRPHVQIKK--SVLER--FVHTYVVGNFLLTHLSKLREEFAIVGDV------RGKGLMIG  132 (329)
Q Consensus        73 ----------~~hg~T~agnlA~aaala~--~ile~--le~v~~lG~~L~~gL~eL~~~~p~v~~V------RG~GLm~g  132 (329)
                                ...++|.  +++..+++..  +.+.+  .+++++....|.+.+.+.....+.+.-+      .-.+.+..
T Consensus       261 ~~~~~~~~~~r~e~Gt~--~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~  338 (408)
T d1t3ia_         261 DHFTTGELPHKFEAGTP--AIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALAS  338 (408)
T ss_dssp             SCEEECCTTGGGCCSSC--CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEE
T ss_pred             cccccCCchhhhcCCcH--HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEE
Confidence                      0011222  3222222222  55544  5556655555555555555555533211      11234555


Q ss_pred             EEeecCCCCCCCCChHHHHHHHHHHHHCCceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         133 VDLVQDKETKVPLNSRHMTHILDSCKEHGLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       133 Ief~~d~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.. .      +   ...+...|-++||.++...          ...+.||+.|.+..   |++|||.+++++
T Consensus       339 f~~~~-~------~---~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~yn---t~~did~li~~L  400 (408)
T d1t3ia_         339 FNVAG-L------H---ASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYN---TKEEIDLFLQSL  400 (408)
T ss_dssp             EEETT-B------C---HHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTC---CHHHHHHHHHHH
T ss_pred             EEeCC-C------C---HHHHHHHHhhCCcEEecCcccccHHHHhhcCCccEEEECCCCC---CHHHHHHHHHHH
Confidence            55531 0      1   3456777888999875310          12468999998766   689999999985

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.19  E-value=0.05  Score=50.01  Aligned_cols=180  Identities=13%  Similarity=-0.010  Sum_probs=96.0

Q ss_pred             ccccceEEehhHhhchhcc-c--hhhhhcccCCcch---HHHhhcCCccccceeeechh-HHHhhhhhhhccCCCCccch
Q psy7882           5 YYRDCGVVVSAVDFGSGDN-G--TYLGFQCLQICRF---VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILKTPAHKL   77 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRT-G--~~fA~e~~GV~PD---i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~~~~hg~   77 (329)
                      ..+|++||.|+++.++-.. .  ..++....++..-   ..|.+++++ ..|+++.++. ..+.+.. ...    .....
T Consensus       221 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~vd~~~~s~hK~~~~p~-g~~~l~~~~~~~~~~~~~-~~~----~~~~~  294 (445)
T d3bc8a1         221 ANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPV-GGAIIAGFNEPFIQDISK-MYP----GRASA  294 (445)
T ss_dssp             HHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCS-SCEEEEESCHHHHHHHHH-HSC----SCBCS
T ss_pred             HHhCCcEEEEccchhhhhhccccchhccCcCCcceEEecCccccccCC-CCceeeeCChHHHHHHHH-HHh----hcccC
Confidence            5679999999998754111 1  1112222223221   459988774 5666766653 3333321 011    11111


Q ss_pred             hhhcc-HHHHHHHHhhHHhH-HHHHHHHHHHHHHHHHHHHHhCCc-eeeEEeeceeeEEEeecCCCCCCCCChHHHHHHH
Q psy7882          78 KISDT-VRPHVQIKKSVLER-FVHTYVVGNFLLTHLSKLREEFAI-VGDVRGKGLMIGVDLVQDKETKVPLNSRHMTHIL  154 (329)
Q Consensus        78 T~agn-lA~aaala~~ile~-le~v~~lG~~L~~gL~eL~~~~p~-v~~VRG~GLm~gIef~~d~~~~~p~~~~~~~~~~  154 (329)
                      +...+ .+....+..+-+++ .++...+.+++.+.|+++...++. +....+......+.+......    .......+.
T Consensus       295 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~----~~~~~~~l~  370 (445)
T d3bc8a1         295 SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGH----HDKAVTQLG  370 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSS----SSCHHHHHH
T ss_pred             cchHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeecccc----CCCCHHHHH
Confidence            11111 11111121122222 566778888999999998877763 556666676777776432211    112344566


Q ss_pred             HHHHHCCceeec-----------------cC-----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         155 DSCKEHGLLLGR-----------------GG-----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       155 ~~l~e~GVLl~~-----------------~G-----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.||-...                 .+     ...+.+++.+....   |++|||.+++++
T Consensus       371 ~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~~~~~---T~eDID~~v~~L  432 (445)
T d3bc8a1         371 SMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGM---KMQDVDLFIKRL  432 (445)
T ss_dssp             HHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             HHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeCcCCC---CHHHHHHHHHHH
Confidence            677788763210                 01     11244777666554   689999999985

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.11  E-value=0.027  Score=49.99  Aligned_cols=176  Identities=9%  Similarity=-0.029  Sum_probs=87.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCC-------
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKT-------   72 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~-------   72 (329)
                      ..||+++++|=+|+ +|..    .++.-....|+     -|.++|-. -+|++..+++..+...+...+....       
T Consensus       154 ~~~g~~~~vDa~qs-~G~~----~~d~~~~~~D~~~~s~~K~l~gp~-G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T d1m32a_         154 HRYGKTYIVDAMSS-FGGI----PMDIAALHIDYLISSANKCIQGVP-GFAFVIAREQKLAACKGHSRSLSLDLYAQWRC  227 (361)
T ss_dssp             HHHTCEEEEECTTT-TTTS----CCCTTTTTCSEEEEESSSTTCCCS-SEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHH
T ss_pred             cccceeeEeecccc-cCcc----cccccccccceEEeeecccccCCC-CceEEEechhhhhhhccccccccccchhhhcc
Confidence            35799999999998 3321    12222344672     19887742 4688889988776543200000000       


Q ss_pred             ---Cccchhhhcc-HHHHHHHHh--hHHhH------HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCC
Q psy7882          73 ---PAHKLKISDT-VRPHVQIKK--SVLER------FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKE  140 (329)
Q Consensus        73 ---~~hg~T~agn-lA~aaala~--~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~  140 (329)
                         ......++.+ .++.+....  ..+++      ..+.+...+.+.+.++.+-.......+.|..+ +.+|.+.++..
T Consensus       228 ~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~-v~~~~~p~~~~  306 (361)
T d1m32a_         228 MEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPI-ITAFYSPEDPQ  306 (361)
T ss_dssp             HHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSS-EEEEECCCCTT
T ss_pred             ccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCc-EEEEECCCCCC
Confidence               0000011112 122222222  12221      22334444444444443311111122234333 44565533221


Q ss_pred             CCCCCChHHHHHHHHHHHHCCceeeccCC-CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCKEHGLLLGRGGL-SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~e~GVLl~~~G~-~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                             .....+.+.|.++|+++.+.+. .++.+|+.. +-  ..+++|||++++++
T Consensus       307 -------~~~~~~~~~l~~~gi~i~~G~~~~~~~~Ris~-~g--~~~~~di~~lv~al  354 (361)
T d1m32a_         307 -------YRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGN-IG--EVYAADITALLTAI  354 (361)
T ss_dssp             -------CCHHHHHHHHHHTTEECEECCCSSSCEEEEEC-CS--SCCHHHHHHHHHHH
T ss_pred             -------CCHHHHHHHHHHCCcEEECCCcCCCCEEEEeC-CC--CCCHHHHHHHHHHH
Confidence                   1145688899999998865332 467899863 21  12588999999986

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=95.97  E-value=0.052  Score=50.09  Aligned_cols=174  Identities=8%  Similarity=-0.002  Sum_probs=83.6

Q ss_pred             cccceEEehhHhhchhccchhh-hh----cccC-----Ccch-------HHHhhc-CCccccceeeechhHHHhhhhhhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYL-GF----QCLQ-----ICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKY   67 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~f-A~----e~~G-----V~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~   67 (329)
                      .||+++|.||+...+-..+.-+ ..    ....     -.+|       ++|.++ .| +=+|.+++.+++....... .
T Consensus       220 ~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G-~RiG~~~~~~~~i~~~~~~-~  297 (431)
T d1m7ya_         220 DKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-M  297 (431)
T ss_dssp             HHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH-H
T ss_pred             ccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCC-CccceeccchhhhHHHHHH-H
Confidence            5799999999998764333211 00    0011     1122       469887 55 3789998888765443310 0


Q ss_pred             ccCCCCccchhhhccHHHHHHHHh-hHHhH-HH----HHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCC
Q psy7882          68 QILKTPAHKLKISDTVRPHVQIKK-SVLER-FV----HTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKE  140 (329)
Q Consensus        68 ~~~~~~~hg~T~agnlA~aaala~-~ile~-le----~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~  140 (329)
                      .   .....++... .++++.+.. +..++ ++    +.++.-+.+.+.|    ++.++ .-+... |+++-+++.....
T Consensus       298 ~---~~~~~~~~~~-~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L----~~~gi-~~~~p~gg~f~w~~l~~~~~  368 (431)
T d1m7ya_         298 S---SFGLVSSQTQ-HLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL----QKSGI-SCLNGNAGLFCWVDMRHLLR  368 (431)
T ss_dssp             G---GGSCCCHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH----HTTTC-EECCCCSSSEEEEECGGGSS
T ss_pred             h---cccccccccc-chhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhh----hcCCc-EEecCCceeEEEEECccccc
Confidence            0   0111111111 222233333 33322 11    1222222233322    33332 223333 6777777753111


Q ss_pred             CCCCCChHHHHHHHHHHH-HCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         141 TKVPLNSRHMTHILDSCK-EHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       141 ~~~p~~~~~~~~~~~~l~-e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..   ..+-...+++.++ ++||++.|..    ..++.+|+.  +  ...+++++++.++..
T Consensus       369 ~~---~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~--~--a~~~e~~l~~al~rL  423 (431)
T d1m7ya_         369 SN---TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC--F--ANLPERTLDLAMQRL  423 (431)
T ss_dssp             SS---SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEE--C--SSSCHHHHHHHHHHH
T ss_pred             cC---cccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEE--e--CcCCHHHHHHHHHHH
Confidence            10   1122345666665 5799998742    235678874  2  222467888888753

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.069  Score=48.97  Aligned_cols=182  Identities=11%  Similarity=0.008  Sum_probs=89.8

Q ss_pred             ccccceEEehhHhhchhccchhh-hhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-GFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..+|+++|.||+...+...|.-. ....+.-.+|       ++|.++ .| +-+|.+++.+++.+.+......   ...+
T Consensus       201 ~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG-~RvG~~v~~~~~~~~l~~~~~~---~~~~  276 (418)
T d1w7la_         201 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQN---SVFH  276 (418)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHT---TTSC
T ss_pred             HhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCC-Ccccccccchhhhhhhcccccc---cccc
Confidence            35799999999998886544211 1111111123       679977 45 5999999999988776531000   0122


Q ss_pred             chhhhccHHHHHHHHh-hHHhH-----HHHHHHHHHHHHHHHHHHHHhCCceeeEEe-eceeeEEEeecCC----CCCCC
Q psy7882          76 KLKISDTVRPHVQIKK-SVLER-----FVHTYVVGNFLLTHLSKLREEFAIVGDVRG-KGLMIGVDLVQDK----ETKVP  144 (329)
Q Consensus        76 g~T~agnlA~aaala~-~ile~-----le~v~~lG~~L~~gL~eL~~~~p~v~~VRG-~GLm~gIef~~d~----~~~~p  144 (329)
                      .++.+. .+++.++.. ..+.+     +.+..+.=+..++.+.+..++.++. -.+- -|.++-++|....    .....
T Consensus       277 ~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~  354 (418)
T d1w7la_         277 CPTQSQ-AAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLK-PLIPQGSYFLITDISDFKRKMPDLPGA  354 (418)
T ss_dssp             CCHHHH-HHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCE-EEECSBSSEEEEECHHHHHHCCCCCCC
T ss_pred             ccchhh-HHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhcCCc-ccCCCceeEEEEECcccccccchhccc
Confidence            222221 233333333 22111     2222222222222233333334432 2222 3666777774210    00000


Q ss_pred             CChHHHHHHHHHH-HHCCceeeccC---------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         145 LNSRHMTHILDSC-KEHGLLLGRGG---------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       145 ~~~~~~~~~~~~l-~e~GVLl~~~G---------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .+......++..| .++||++.|..         ...+.+|++  +..   +++++++.++++
T Consensus       355 ~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis--~~~---~~~~l~~a~~rl  412 (418)
T d1w7la_         355 VDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFC--FVK---DEATLQAMDEKL  412 (418)
T ss_dssp             TTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEE--CCC---CHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEE--EcC---CHHHHHHHHHHH
Confidence            0111234455554 56899998742         124689985  433   578888888874

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=95.91  E-value=0.035  Score=50.11  Aligned_cols=164  Identities=12%  Similarity=0.014  Sum_probs=83.2

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhcCCccccceeeechh-HHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFKGSFWDKLIVHTSTC-TFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLgGG~~PigAv~~~~e-I~d~~~~~~~~~~~~~~hg   76 (329)
                      ..||+++|.||+...+...+....  .....+|       ++|.++...+-+|.+++..+ +...+..        . ..
T Consensus       189 ~~~~~~iI~De~y~~~~~~~~~~~--~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i~~~~~~--------~-~~  257 (389)
T d2gb3a1         189 ERHGLFLIVDEVYSEIVFRGEFAS--ALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMK--------L-AQ  257 (389)
T ss_dssp             HHTTCEEEEECTTTTCBCSSCCCC--GGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHH--------H-HH
T ss_pred             ccCCEEEEEecccccccccccccc--ccccccccccccccccccccCcccceeeeeccchhHHHHHhh--------h-hh
Confidence            457999999999988866554322  2233344       35776654468898887664 4333321        0 11


Q ss_pred             hhhhcc----HHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhCCceeeEE-eeceeeEEEeecCCCCCCCCChHH
Q psy7882          77 LKISDT----VRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEFAIVGDVR-GKGLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        77 ~T~agn----lA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~p~v~~VR-G~GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      +.++.+    .++.+.+..  +.++   .+.+.-..-++.+.+..++++....+. .-|+++-+.+...       +   
T Consensus       258 ~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~lp~~-------~---  324 (389)
T d2gb3a1         258 GRLAPPLLEQIGSVGLLNLDDSFFD---FVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVE-------D---  324 (389)
T ss_dssp             HSCCCCHHHHHHHHHHHTCCHHHHH---HHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSS-------C---
T ss_pred             ccccccccccccccccccccchhcc---cccccccccchhhhhhhhhhccccccCCCceEEEEEeCCCC-------C---
Confidence            111222    233333332  2222   232222223333334344456543333 3466677776321       1   


Q ss_pred             HHHHHHHHHH------CCceeeccC-------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKE------HGLLLGRGG-------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e------~GVLl~~~G-------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+.+.|++      +||.+.|..       ...+.+||.  +..   +++++.+.++.+
T Consensus       325 ~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis--~~~---~~~~l~~a~~~L  380 (389)
T d2gb3a1         325 AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIA--CVL---EKDLLSRAIDVL  380 (389)
T ss_dssp             HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEE--EcC---CHHHHHHHHHHH
Confidence            2335555544      466665531       124678886  433   578888888764

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.04  Score=50.54  Aligned_cols=172  Identities=8%  Similarity=-0.122  Sum_probs=93.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhhhhhhcc----CCCC--
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIKIKYQI----LKTP--   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~----~~~~--   73 (329)
                      ..+|+++++|=+|. .|..    ..+.-...+|     .-|-+ |+ --+|++.++++.++...+.....    ....  
T Consensus       190 ~~~g~~~~vD~~q~-~g~~----~id~~~~~~D~~~~s~hK~~-Gp-~G~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~  262 (405)
T d1jf9a_         190 HQHGAKVLVDGAQA-VMHH----PVDVQALDCDFYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLSE  262 (405)
T ss_dssp             HHTTCEEEEECTTT-TTTS----CCCHHHHTCSEEEEEGGGTT-SC-SSCEEEEECHHHHTTCCCSSCSSSSEEECCTTT
T ss_pred             HHcCCeeeccccee-cccc----ccchhhcCCceeeccccccc-cC-CCceeeeechhhhcccCcccccccccCcccccc
Confidence            46799999999887 3221    1111123467     23974 33 23789999998876543200000    0000  


Q ss_pred             ----------ccchhhhccHHHHHHHHh-hHHhH--HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEEEeecC
Q psy7882          74 ----------AHKLKISDTVRPHVQIKK-SVLER--FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGVDLVQD  138 (329)
Q Consensus        74 ----------~hg~T~agnlA~aaala~-~ile~--le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gIef~~d  138 (329)
                                ...+|.+- .++++..+. +.+++  ++++.+....|.+.+.+.....+.+  .....++.++.+.+...
T Consensus       263 ~~~~~~~~~r~e~GT~~~-~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~~~~~r~~ivsf~~~~~  341 (405)
T d1jf9a_         263 GTTWTKAPWRFEAGTPNT-GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH  341 (405)
T ss_dssp             CCEECCTTGGGCCSSCCH-HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTC
T ss_pred             ccccccchhhhcCCCCcH-HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcccccCCcCcCcEEEEEcCCC
Confidence                      11123211 222222222 44444  5666666666666666655555532  22223445666666321


Q ss_pred             CCCCCCCChHHHHHHHHHHHHCCceeeccC----------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCKEHGLLLGRGG----------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~e~GVLl~~~G----------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                                ....+...|-++||.++...          .....+|+.+.+-.   |++|||.+++++
T Consensus       342 ----------~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~yn---t~eDid~l~~~l  397 (405)
T d1jf9a_         342 ----------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN---THEEVDRLVTGL  397 (405)
T ss_dssp             ----------CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             ----------CHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence                      12346677778999876311          12468999998766   589999999975

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=95.60  E-value=0.13  Score=45.66  Aligned_cols=42  Identities=5%  Similarity=-0.202  Sum_probs=27.7

Q ss_pred             HHHHHHHHH-CCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKE-HGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e-~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|++ +||++.|+.    ...+.+|+.  +..   +++++++.++..
T Consensus       307 ~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis--~~~---~~e~l~~al~rl  353 (361)
T d1d2fa_         307 NALQKALIEQEKVAIMPGYTYGEEGRGFVRLN--AGC---PRSKLEKGVAGL  353 (361)
T ss_dssp             HHHHHHHHHTTCEECEEGGGGCGGGTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEEEeccccCCCCCCEEEEE--EcC---CHHHHHHHHHHH
Confidence            456777665 599998642    124678986  322   468888888764

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=95.59  E-value=0.024  Score=51.81  Aligned_cols=170  Identities=5%  Similarity=-0.058  Sum_probs=86.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch----------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF----------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD----------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      .++|+++|.||+...+...+.-+.. ...+.|+          ++|.++ -| +-+|.+++++++.+.+......   ..
T Consensus       193 ~~~~~~iI~De~Y~~~~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G-lRvG~~~~~~~~~~~~~~~~~~---~~  267 (388)
T d1j32a_         193 VEAGLWVLSDEIYEKILYDDAQHLS-IGAASPEAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGH---ST  267 (388)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHT---TT
T ss_pred             ccCCeEEEchhhhhcccccCCCCCC-HHHhCcccccceeEecCChhhhhcch-hHeEEEEECHHHHHHHHHhhhh---cc
Confidence            4689999999998766443321110 1112332          579987 67 4899999999998876531000   01


Q ss_pred             ccchhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHH
Q psy7882          74 AHKLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        74 ~hg~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .+.++.+. .++...+..  +.+++ .+..++.-+.+.+.|+    +++.+.-.... |+++-+++....     .+   
T Consensus       268 ~~~~~~~q-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~g~~~~~p~gg~~l~~~l~~~~-----~~---  334 (388)
T d1j32a_         268 SNVCTFAQ-YGAIAAYENSQDCVQEMLAAFAERRRYMLDALN----AMPGLECPKPDGAFYMFPSIAKTG-----RS---  334 (388)
T ss_dssp             CSCCHHHH-HHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHH----TCTTCBCCCCCBTTEECCBCGGGT-----CC---
T ss_pred             ccccHHHH-HHHhhcccchHHHHHHHHHHHHHHHHHHHHHHH----hCCCCEecCCCceEEEEEECCCCC-----CC---
Confidence            11222111 222233332  33332 2333333333443333    34333222233 445544553211     01   


Q ss_pred             HHHHHHHHH-HCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCK-EHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~-e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...++..++ ++||.+.|+..  ..+.+|+.  +.   .+++++++.++..
T Consensus       335 ~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls--~~---~~~e~l~~al~rl  380 (388)
T d1j32a_         335 SLDFCSELLDQHQVATVPGAAFGADDCIRLS--YA---TDLDTIKRGMERL  380 (388)
T ss_dssp             HHHHHHHHHHHHCEECEEGGGGTCTTBEEEE--CC---SCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEEeccccCCCCeEEEE--Ee---CCHHHHHHHHHHH
Confidence            234555554 67999987421  35778876  22   2578888888764

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=95.59  E-value=0.029  Score=50.42  Aligned_cols=163  Identities=13%  Similarity=-0.005  Sum_probs=84.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAHK   76 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~hg   76 (329)
                      .+||+.+|.||+..-+...+.........-.+|       ++|.++ .| +-+|.+++.+++.+.+..  ..      ..
T Consensus       191 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G-~R~G~~~~~~~~~~~~~~--~~------~~  261 (375)
T d1o4sa_         191 KKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSK--IQ------SH  261 (375)
T ss_dssp             HHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH--HH------HH
T ss_pred             HHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCc-cccccccccccchhhhhh--hh------cc
Confidence            467999999998775533322111111111223       579998 67 489999999998876653  00      01


Q ss_pred             hhhhcc-HHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHHH
Q psy7882          77 LKISDT-VRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHMT  151 (329)
Q Consensus        77 ~T~agn-lA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~~  151 (329)
                      .+.... .....+.+.  +.... .+...+.-+.+.+.|+++    +. .-+... |+++.+++..+           ..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~----g~-~~~~p~gg~f~~~~~~~~-----------~~  325 (375)
T d1o4sa_         262 TTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM----GV-KFVEPEGAFYLFFKVRGD-----------DV  325 (375)
T ss_dssp             HTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT----TC-CCCCCSBSSEEEEECSSC-----------HH
T ss_pred             ccccccccchhhhhhhcccchhhhHHHHHHHHHHHHHHHHhc----Cc-eEecCCccEEEEEECCCC-----------HH
Confidence            111111 111111111  11111 334444455555555443    32 222233 55566666321           12


Q ss_pred             HHHHH-HHHCCceeeccCC--CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         152 HILDS-CKEHGLLLGRGGL--SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       152 ~~~~~-l~e~GVLl~~~G~--~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .++.. +.++||++.|+..  .++.+|+.  +..   +++++.+.++..
T Consensus       326 ~~~~~ll~~~gV~v~pG~~F~~~g~iRis--~~~---~~e~l~~al~rl  369 (375)
T d1o4sa_         326 KFCERLLEEKKVALVPGSAFLKPGFVRLS--FAT---SIERLTEALDRI  369 (375)
T ss_dssp             HHHHHHHHHHCEECEEGGGGTCTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEEEccccCCCCeEEEE--EcC---CHHHHHHHHHHH
Confidence            24444 5568999987421  25678886  332   578888887753

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.15  Score=45.53  Aligned_cols=173  Identities=12%  Similarity=0.027  Sum_probs=85.0

Q ss_pred             cccccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccC--------
Q psy7882           4 TYYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQIL--------   70 (329)
Q Consensus         4 ~~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~--------   70 (329)
                      ...+|+++++|.+|+ +|..    ....-....|+     .|.++|-. -++.+..+.+..+.......+..        
T Consensus       170 ~~~~g~~~~vD~~qs-~g~~----~~d~~~~~~D~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (388)
T d1h0ca_         170 CHRYKCLLLVDSVAS-LGGT----PLYMDRQGIDILYSGSQKALNAPP-GTSLISFSDKAKKKMYSRKTKPFSFYLDIKW  243 (388)
T ss_dssp             HHTTTCEEEEECTTT-TTTS----CCCTTTTTCSEEEEESSSTTCCCT-TCEEEEECHHHHHHHTTCSSCCSCSTTCHHH
T ss_pred             hhcccccceeccccc-cccc----cccccccccceecccccccccCCC-ceEEEeecHHHHHhhhhccccccccccccch
Confidence            346899999999998 3221    12222233462     28876542 34667777766554432000000        


Q ss_pred             ---------CCCccchhhhccHHHHHHHHh-hHHhH------HHHHHHHHHHHHHHHHHHHHhCCcee--eEEeeceeeE
Q psy7882          71 ---------KTPAHKLKISDTVRPHVQIKK-SVLER------FVHTYVVGNFLLTHLSKLREEFAIVG--DVRGKGLMIG  132 (329)
Q Consensus        71 ---------~~~~hg~T~agnlA~aaala~-~ile~------le~v~~lG~~L~~gL~eL~~~~p~v~--~VRG~GLm~g  132 (329)
                               ......+|-+. .+..+..+. +.+.+      ..+..++.+++++.+..+-- ...+.  ..|. ..+..
T Consensus       244 ~~~~~~~~~~~~~~~~t~~~-~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~-~~~~~~~~~rs-~~i~~  320 (388)
T d1h0ca_         244 LANFWGCDDQPRMYHHTIPV-ISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGL-QLFVKDPALRL-PTVTT  320 (388)
T ss_dssp             HHHHTTCSSSCCCCCSCCCH-HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTC-CBSSCSGGGBC-TTEEE
T ss_pred             hhhhhhhccccccccccccH-HHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCc-ccccCCHHHcC-CeEEE
Confidence                     00000111111 222222222 33222      33455566666666655421 11111  2222 23456


Q ss_pred             EEeecCCCCCCCCChHHHHHHHHHHHH-CCceeeccC--CCCCEEEEe-CccccCcCCHHHHHHHHhcc
Q psy7882         133 VDLVQDKETKVPLNSRHMTHILDSCKE-HGLLLGRGG--LSGNTLTAL-QPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       133 Ief~~d~~~~~p~~~~~~~~~~~~l~e-~GVLl~~~G--~~~nvIrl~-PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.+.      ++   ...+...|.+ +||.+....  ..++++|+. ..+..   |.+|||.+++++
T Consensus       321 ~~~p~~------~~---~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~---t~edid~li~aL  377 (388)
T d1h0ca_         321 VAVPAG------YD---WRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNA---TRENVDRVTEAL  377 (388)
T ss_dssp             EECCTT------CC---HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             EECCCC------CC---HHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCC---CHHHHHHHHHHH
Confidence            665321      11   3456666665 598776421  246799997 44444   589999999986

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=95.04  E-value=0.088  Score=47.75  Aligned_cols=172  Identities=12%  Similarity=-0.057  Sum_probs=79.3

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcc---h-------HHHhhc-CCccccceeeec-hhHHHhhhhhhhccCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICR---F-------VQKDFK-GSFWDKLIVHTS-TCTFENFIKIKYQILKT   72 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~P---D-------i~KaLg-GG~~PigAv~~~-~eI~d~~~~~~~~~~~~   72 (329)
                      -.||+++|.||+...+-.-+..... ...+.+   +       ++|.++ .| +-+|.+++. +.+.+.+......   .
T Consensus       194 ~~~~~~ii~De~Y~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~SK~~~~~G-~R~g~~~~~~~~i~~~~~~~~~~---~  268 (394)
T d1c7na_         194 LKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDA---T  268 (394)
T ss_dssp             HHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHH---T
T ss_pred             cccceeEeccccccccccCCccccc-hhhhhcccccceeecccccccccccc-cccccccccChhhhhhhhhhhhh---c
Confidence            3679999999999877332221111 111112   1       469876 45 366655554 4565555420000   0


Q ss_pred             CccchhhhccHHHHHHHHh--hHHhHHHHHHHHHHHHHHHHHHHHHhC-CceeeEEeec-eeeEEEeecCCCCCCCCChH
Q psy7882          73 PAHKLKISDTVRPHVQIKK--SVLERFVHTYVVGNFLLTHLSKLREEF-AIVGDVRGKG-LMIGVDLVQDKETKVPLNSR  148 (329)
Q Consensus        73 ~~hg~T~agnlA~aaala~--~ile~le~v~~lG~~L~~gL~eL~~~~-p~v~~VRG~G-Lm~gIef~~d~~~~~p~~~~  148 (329)
                      ...+.......++......  +.+   +...+.-+.-++.+.++.+.+ +.+......| .+.-+++....     .+  
T Consensus       269 ~~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~~~~~~~-----~~--  338 (394)
T d1c7na_         269 SGMPFTTLGYKACEICYKECGKWL---DGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALK-----MD--  338 (394)
T ss_dssp             TCCCCCHHHHHHHHHHHHHCHHHH---HHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGC-----CC--
T ss_pred             cccccccccchhhhhhhcchhhhh---cccccccchhhhhhhhhhhccccceeecCCCceeEEEEECCCCC-----CC--
Confidence            1111111111111111111  222   222222222233333333332 3333333344 44555653211     01  


Q ss_pred             HHHHHHHHHHHC-CceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEH-GLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~-GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ...+.+.|+++ ||++.|+.    ...+.+||.  +..   ++++|++.++..
T Consensus       339 -~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis--~~~---~~e~i~eal~rl  386 (394)
T d1c7na_         339 -HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERIN--LAA---PSSVIQESLERL  386 (394)
T ss_dssp             -HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEE--EeC---CHHHHHHHHHHH
Confidence             24467777655 99998742    124678885  332   478888888764

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=94.53  E-value=0.3  Score=44.39  Aligned_cols=179  Identities=8%  Similarity=-0.078  Sum_probs=88.5

Q ss_pred             ccccceEEehhHhhchhccchhh-h-hcccCCcch------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCCcc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL-G-FQCLQICRF------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTPAH   75 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f-A-~e~~GV~PD------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~~h   75 (329)
                      ..||+++|.||+...+...+.-. . ....+..+-      ++|.++ .| +=+|.+++.+++.+.+..  ... ....+
T Consensus       201 ~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~i~~~~~--~~~-~~~~~  276 (418)
T d2r5ea1         201 KKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQM--VHQ-NCVYT  276 (418)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGG-GCCEEEESCHHHHHHHHH--HHT-TTTCS
T ss_pred             hcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCC-cccccccccchhhhhhhh--ccc-ccccc
Confidence            46799999999997664332110 0 111111111      579987 67 489999999998877653  110 00112


Q ss_pred             chhhhccHHHHHHHHh-h--------HHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEeeceeeEEEeecCCCCCC--
Q psy7882          76 KLKISDTVRPHVQIKK-S--------VLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGKGLMIGVDLVQDKETKV--  143 (329)
Q Consensus        76 g~T~agnlA~aaala~-~--------ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~GLm~gIef~~d~~~~~--  143 (329)
                      .++... .++++.+.. .        .+++ .++.+..-+.+.+.|++    .+.....-.-|+++-+++..-.....  
T Consensus       277 ~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~P~gg~f~~~~~~~~~~~~~~~  351 (418)
T d2r5ea1         277 CATPIQ-EAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE----VGMNPTVPQGGYFMVADWSSLDSKVDLT  351 (418)
T ss_dssp             CCHHHH-HHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH----TTCEEEECSBSSEEEEECGGGSTTCCGG
T ss_pred             cccchh-hhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhh----cCCcccCCCceeEEEEEcccccccccch
Confidence            222111 122222322 1        1111 22233333444444443    34322222336666777743211100  


Q ss_pred             -CCChHHHHHHHHHHH-HCCceeeccCC---------CCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         144 -PLNSRHMTHILDSCK-EHGLLLGRGGL---------SGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       144 -p~~~~~~~~~~~~l~-e~GVLl~~~G~---------~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                       ..+..-...++..|+ ++||++.|...         ..+.+|+.  +..   ++++|++.++..
T Consensus       352 ~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis--~~~---~~e~l~~a~~rl  411 (418)
T d2r5ea1         352 QETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYC--FFK---KDENLQKAAEIL  411 (418)
T ss_dssp             GCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             hcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence             001112345666665 56999987421         12568885  322   578899888764

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.10  E-value=0.042  Score=48.49  Aligned_cols=53  Identities=11%  Similarity=-0.066  Sum_probs=34.4

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-----HHHhhcCCccccceeeechhHHHhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFI   63 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~   63 (329)
                      ..||+++|+||++. +|..+.  ....+|  .|     +.|.+++.. .+|.+.+++++.+.+.
T Consensus       167 ~~~~i~livD~a~~-~g~~~~--~~~~~g--~D~~~~S~~K~~~~~g-~~g~l~~~~~~~~~~~  224 (364)
T d2e7ja1         167 SEYDVPLLVNGAYA-IGRMPV--SLKEIG--ADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVL  224 (364)
T ss_dssp             HTTTCCEEEECTTT-BTTBCC--CHHHHT--CSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTT
T ss_pred             ccccchhhccccch-hhhhhh--cccccc--cceeeeccccccCCCC-CEEEEEECHHHHHHHH
Confidence            46899999999985 433221  111122  46     359998763 5788888888776544

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=93.87  E-value=0.48  Score=41.54  Aligned_cols=171  Identities=11%  Similarity=0.028  Sum_probs=82.8

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhhhhhhccCCCC-------
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFIKIKYQILKTP-------   73 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~~~~~~~~~~~-------   73 (329)
                      .+|+++++|.||. +|-.    .+..-....|+     .|.++|+. -++.+..+++..+.......+.....       
T Consensus       171 ~~g~~~~vDa~~~-~g~~----~~~~~~~~~d~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (377)
T d1vjoa_         171 EFGTLLLVDTVTS-LGGV----PIFLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLG  244 (377)
T ss_dssp             HHTCEEEEECTTT-TTTS----CCCTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHH
T ss_pred             hccceEEEecchh-hhhh----hhcccccccceeeecccccccCCC-EEEEecchhhHHhhhhccCCCCcceeeccchhh
Confidence            5789999999997 4322    12222334451     28887762 35677777777765442100000000       


Q ss_pred             ----ccchh-hhccHHHHHHH-Hh-hHHhH------HHHHHHHHHHHHHHHHHHHHhCCce--eeEEeeceeeEEEeecC
Q psy7882          74 ----AHKLK-ISDTVRPHVQI-KK-SVLER------FVHTYVVGNFLLTHLSKLREEFAIV--GDVRGKGLMIGVDLVQD  138 (329)
Q Consensus        74 ----~hg~T-~agnlA~aaal-a~-~ile~------le~v~~lG~~L~~gL~eL~~~~p~v--~~VRG~GLm~gIef~~d  138 (329)
                          ....+ ...+..+..++ +. ..++.      ..+.+++..++.+.+.+.-  ...+  ...|- ..+..+.+.++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~rs-~~v~~~~~p~~  321 (377)
T d1vjoa_         245 KYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG--LSLHVEKEYRL-PTLTTVCIPDG  321 (377)
T ss_dssp             HHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCBSSCGGGBC-SSEEEEECCTT
T ss_pred             hccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccC--ceeecChHhcC-CeEEEEECCCC
Confidence                00000 01112221222 11 22221      3344455555555554431  1121  12222 23445554321


Q ss_pred             CCCCCCCChHHHHHHHHHHH-HCCceeeccC--CCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         139 KETKVPLNSRHMTHILDSCK-EHGLLLGRGG--LSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       139 ~~~~~p~~~~~~~~~~~~l~-e~GVLl~~~G--~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                            .   ....+...|. ++||.+....  ..++++|+.+ .+..   +.+|||++++++
T Consensus       322 ------~---~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~---t~edi~~lv~al  372 (377)
T d1vjoa_         322 ------V---DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNS---RKESVDQLIPAL  372 (377)
T ss_dssp             ------C---CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             ------C---CHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCC---CHHHHHHHHHHH
Confidence                  1   1345666665 5699875421  1367899985 4444   579999999985

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=93.04  E-value=0.35  Score=44.42  Aligned_cols=43  Identities=14%  Similarity=0.088  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHCCceeeccCCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSCKEHGLLLGRGGLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l~e~GVLl~~~G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +..+.+.|.++||....++  .+.+++.-..-   .|++|+|.+++++
T Consensus       410 ~~~~~~~L~~~gI~~e~~~--~~~i~~~~s~~---~T~edid~li~aL  452 (462)
T d1c4ka2         410 ATIVANYLRDHGIIPEKSD--LNSILFLMTPA---ETPAKMNNLITQL  452 (462)
T ss_dssp             HHHHHHHHHHTTCCCSEEC--SSEEEEECCTT---CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeeeccC--CCeEEEEecCC---CCHHHHHHHHHHH
Confidence            3456777889999876543  46777654333   3799999999985

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.86  E-value=0.51  Score=42.49  Aligned_cols=53  Identities=8%  Similarity=-0.152  Sum_probs=31.4

Q ss_pred             ccccceEEehhHhhchhccchhhhh-cc-cCCcch---------HHHhhcCCccccceeeechh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGF-QC-LQICRF---------VQKDFKGSFWDKLIVHTSTC   57 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~-e~-~GV~PD---------i~KaLgGG~~PigAv~~~~e   57 (329)
                      ..|++++|.||+...+...|..... .. ..-..+         ++|.++...+-+|.+++.+.
T Consensus       204 ~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~  267 (412)
T d1bw0a_         204 EELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDP  267 (412)
T ss_dssp             HHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECT
T ss_pred             ccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccch
Confidence            3568999999999988655532111 11 111111         46988743358888877643

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.15  E-value=0.089  Score=47.58  Aligned_cols=55  Identities=9%  Similarity=-0.095  Sum_probs=33.8

Q ss_pred             ccccceEEehhHhhchhccchhhh--hcccCCcch-----HHHhhcCCccccceeeechhHHHhhhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLG--FQCLQICRF-----VQKDFKGSFWDKLIVHTSTCTFENFIK   64 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA--~e~~GV~PD-----i~KaLgGG~~PigAv~~~~eI~d~~~~   64 (329)
                      .+||+++|.||++... ..+..+.  ...+|  .|     .+|+++|  .-+|.+++++++.+.+..
T Consensus       161 ~~~~~~~i~De~y~~~-~~~~~~~~~~~~~~--~di~~~S~sK~~~g--~~~G~i~~~~~~i~~~~~  222 (366)
T d2aeua1         161 KNKEAIVFVDDASGAR-VRLLFNQPPALKLG--ADLVVTSTDKLMEG--PRGGLLAGKKELVDKIYI  222 (366)
T ss_dssp             HHHTCCEEEECTTHHH-HHHHTTCCCHHHHT--CSEEEEETTSSSSS--CSCEEEEEEHHHHHHHHH
T ss_pred             ccCcEEEEEecCcccc-ccccccCCCHhhcC--ceEEEecccccccc--cceeEEEecHHHHHHHHH
Confidence            4679999999997421 1111100  00112  24     4598864  257999999999987653

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=90.55  E-value=1.8  Score=37.94  Aligned_cols=44  Identities=11%  Similarity=-0.178  Sum_probs=30.1

Q ss_pred             HHHHHHHHH-CCceeeccC--CCCCEEEEe-CccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKE-HGLLLGRGG--LSGNTLTAL-QPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e-~GVLl~~~G--~~~nvIrl~-PPL~It~~t~eeId~~l~~~  197 (329)
                      ..+...|.+ +||.+....  ..+.++|+. .-.+.   +.|||+.++++.
T Consensus       328 ~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~---t~edI~~ll~al  375 (388)
T d2ch1a1         328 WKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECS---TVQKIQFYLYGF  375 (388)
T ss_dssp             HHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGC---SHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCC---CHHHHHHHHHHH
Confidence            457777765 599876532  146789998 33333   579999999985

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.41  E-value=0.56  Score=42.23  Aligned_cols=174  Identities=9%  Similarity=0.016  Sum_probs=80.5

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCcch-------HHHhhc-CCccccceeeec--hhHHHhhhhhhhccCCCCc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQICRF-------VQKDFK-GSFWDKLIVHTS--TCTFENFIKIKYQILKTPA   74 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PD-------i~KaLg-GG~~PigAv~~~--~eI~d~~~~~~~~~~~~~~   74 (329)
                      ..||+++|.||+...+..-+........ ..++       ++|.++ -| +-+|.+.+.  .+....+............
T Consensus       196 ~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~~~G-lRvG~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (395)
T d1xi9a_         196 GEYEIPVISDEIYDLMTYEGEHISPGSL-TKDVPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDRLARIRL  273 (395)
T ss_dssp             HHHTCCEEEECTTTTCBSSSCCCCHHHH-CSSSCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHHHHHHTC
T ss_pred             hhcCeeEEeccccccccccccccchhhc-CCCCCEEEEeCcchhcccch-hhcEeeEecCHHHHHHHHHHHHHHhhcCCC
Confidence            4579999999998765332221111111 1122       579887 46 477755432  2222211110000000011


Q ss_pred             cchhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHHH
Q psy7882          75 HKLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRHM  150 (329)
Q Consensus        75 hg~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~~  150 (329)
                      +.++++. .+++.++..  +.+++ .+..++.-+.+.+.|+    +.+.+...... |+++-+++......    +   .
T Consensus       274 ~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~p~gg~~~~~~l~~~~~~----~---~  341 (395)
T d1xi9a_         274 CPNTPAQ-FAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLN----EIPGISTTKPQGAFYIFPKIEVGPWK----N---D  341 (395)
T ss_dssp             CSCSHHH-HHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHH----TSTTEECCCCCBSSEECCEECSCSCS----S---H
T ss_pred             CcCHHHH-HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH----hCCCceecCCCeeEEEeEECCCCCCC----C---H
Confidence            2222211 233334433  33333 3334444444554444    34543333333 55566676432110    1   1


Q ss_pred             HHHHHH-HHHCCceeeccC----CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDS-CKEHGLLLGRGG----LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~-l~e~GVLl~~~G----~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ..++.. +.++||++.|+.    ...+.+||.  +..   +++++++.++..
T Consensus       342 ~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris--~~~---~~e~l~eal~rl  388 (395)
T d1xi9a_         342 KEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV--FLP---PIEILEEAMDRF  388 (395)
T ss_dssp             HHHHHHHHHHHCEECEEGGGGCGGGTTBEEEE--CCS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEEEcChhhCCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence            234444 456799998742    125678885  332   578888888764

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=89.67  E-value=1.3  Score=40.97  Aligned_cols=40  Identities=8%  Similarity=-0.109  Sum_probs=28.6

Q ss_pred             HHHHHHHCCceeecc---CCCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         153 ILDSCKEHGLLLGRG---GLSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       153 ~~~~l~e~GVLl~~~---G~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+.+.++||+++++   |..++.+|+.  +..   ++++++++++.+
T Consensus       376 ~~~lL~e~gI~v~pGs~FG~~~~yvRis--l~~---~~e~ld~~l~rL  418 (425)
T d2hoxa1         376 CYQTFQNGRINTQNGVGFEASSRYVRLS--LIK---TQDDFDQLMYYL  418 (425)
T ss_dssp             HHHHHHHTTEECEEGGGGTSCTTEEEEE--CSS---CHHHHHHHHHHH
T ss_pred             HHHHHHhCCEEEEechhcCCCCCEEEEE--ecC---CHHHHHHHHHHH
Confidence            445678999999974   3345788885  332   578889999874

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=88.74  E-value=1.1  Score=39.60  Aligned_cols=42  Identities=7%  Similarity=-0.073  Sum_probs=32.6

Q ss_pred             HHHHHHHHHCCceeeccCCCCCEEEEeC-ccccCcCCHHHHHHHHhcc
Q psy7882         151 THILDSCKEHGLLLGRGGLSGNTLTALQ-PKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       151 ~~~~~~l~e~GVLl~~~G~~~nvIrl~P-PL~It~~t~eeId~~l~~~  197 (329)
                      ..+.+.|.++||++..+  .+++||+.| ++-.   |++|||++++++
T Consensus       352 ~~v~~~L~~~gi~~~~r--~~~~lRiS~~h~yn---t~~did~~~~~L  394 (404)
T d1qz9a_         352 YAVIQALIDRGVIGDYR--EPRIMRFGFTPLYT---TFTEVWDAVQIL  394 (404)
T ss_dssp             HHHHHHHHTTTEECEEE--TTTEEEEECCTTTC---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEeec--CCCeEEEECCCCCC---CHHHHHHHHHHH
Confidence            45788899999987543  258999999 6533   589999999985

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=88.42  E-value=1.8  Score=40.07  Aligned_cols=24  Identities=17%  Similarity=0.051  Sum_probs=17.3

Q ss_pred             CEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         172 NTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       172 nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.+||..|--.  +|++|||.+++++
T Consensus       401 e~vRLaip~~~--~T~e~iD~Vae~i  424 (456)
T d1c7ga_         401 ETVRLTIPRRV--YTYAHMDVVADGI  424 (456)
T ss_dssp             CEEEEECCTTS--CCHHHHHHHHHHH
T ss_pred             ceEEEecCccc--CCHHHHHHHHHHH
Confidence            46898766321  3799999998874

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=87.17  E-value=1.8  Score=37.64  Aligned_cols=45  Identities=9%  Similarity=-0.007  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHCCceeeccCCC-CCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         149 HMTHILDSCKEHGLLLGRGGLS-GNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       149 ~~~~~~~~l~e~GVLl~~~G~~-~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ....+...|.++||.+.. |+. -..+|+.--..+   +.|||+.++++.
T Consensus       308 ~~~~~~~~L~~~GI~~~~-G~~~~g~~RIs~~~~~---~~edv~~Lv~~l  353 (361)
T d2c0ra1         308 LEKEFVKASEQEGFVGLK-GHRSVGGLRASIYNAV---PYESCEALVQFM  353 (361)
T ss_dssp             HHHHHHHHHHHTTEESCB-CCTTTCSEEEECCTTS---CHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHCCCEEec-CCCcCCeEEEEecCCC---CHHHHHHHHHHH
Confidence            356788999999998765 321 124888854333   689999999985

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=87.16  E-value=3.6  Score=36.22  Aligned_cols=169  Identities=8%  Similarity=-0.089  Sum_probs=81.8

Q ss_pred             ccccceEEehhHhhchhccchhhhhcccCCc---ch-------HHHhhc-CCccccceeeechhHHHhhhhhhhccCCCC
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLGFQCLQIC---RF-------VQKDFK-GSFWDKLIVHTSTCTFENFIKIKYQILKTP   73 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA~e~~GV~---PD-------i~KaLg-GG~~PigAv~~~~eI~d~~~~~~~~~~~~~   73 (329)
                      ..+++++|.||+..=+-..+..  .......   +|       ++|.++ .|+ =+|.+++.+++.+.+.......   .
T Consensus       189 ~~~~~~ii~d~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~SK~~~~pG~-RiG~~v~~~~~~~~~~~~~~~~---~  262 (382)
T d1u08a_         189 AGHEIFVISDEVYEHINFSQQG--HASVLAHPQLRERAVAVSSFGKTYHMTGW-KVGYCVAPAPISAEIRKVHQYL---T  262 (382)
T ss_dssp             TTSCCEEEEECTTTTCBCCSSC--CCCGGGSHHHHTTEEEEEEHHHHTTCGGG-CCEEEECCHHHHHHHHHHHHHH---T
T ss_pred             ccccceeeeecchhhccccccc--cccccccccccCcEEEEeeccccccCCcc-cchhhhccchhHHHHHhhhccc---c
Confidence            4568889999987644322211  1111112   22       578886 664 7899999998887665310000   1


Q ss_pred             ccchhhhccHHHHHHHHh--hHHhH-HHHHHHHHHHHHHHHHHHHHhCCceeeEEee-ceeeEEEeecCCCCCCCCChHH
Q psy7882          74 AHKLKISDTVRPHVQIKK--SVLER-FVHTYVVGNFLLTHLSKLREEFAIVGDVRGK-GLMIGVDLVQDKETKVPLNSRH  149 (329)
Q Consensus        74 ~hg~T~agnlA~aaala~--~ile~-le~v~~lG~~L~~gL~eL~~~~p~v~~VRG~-GLm~gIef~~d~~~~~p~~~~~  149 (329)
                      .+.+++.. .+++.++..  +.++. .+..++.-+.+    .+.....+ +.-+... |+.+.+.+..-..    .+   
T Consensus       263 ~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~l----~~~~~~~g-~~~~~p~gg~~~~~~~~~~~~----~d---  329 (382)
T d1u08a_         263 FSVNTPAQ-LALADMLRAEPEHYLALPDFYRQKRDIL----VNALNESR-LEILPCEGTYFLLVDYSAVST----LD---  329 (382)
T ss_dssp             SSCCHHHH-HHHHHHHHHCTHHHHTHHHHHHHHHHHH----HHHTTSSS-CEECCCCBSSEEEEECTTTCC----SC---
T ss_pred             cccccccc-cccccccccchHHHHHHHHHHHhhhhhh----hhhhccCC-cEEecCCceEEEEEecCCCCC----CC---
Confidence            11111111 344445544  22222 22222222222    22222222 2223333 4555566532110    11   


Q ss_pred             HHHHHHHH-HHCCceeeccC------CCCCEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         150 MTHILDSC-KEHGLLLGRGG------LSGNTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       150 ~~~~~~~l-~e~GVLl~~~G------~~~nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      ...+...| .++||++.|..      ...+.+||+  +..   +++++++.++..
T Consensus       330 ~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris--~~~---~~e~l~~al~RL  379 (382)
T d1u08a_         330 DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLC--FAK---KESTLLAAAERL  379 (382)
T ss_dssp             HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEE--CCS---CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEE--EeC---CHHHHHHHHHHH
Confidence            23355555 46899998742      123578885  433   578888888753

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.33  E-value=6.7  Score=33.97  Aligned_cols=52  Identities=19%  Similarity=0.004  Sum_probs=31.3

Q ss_pred             cccceEEehhHhhchhccchhhhhcccCCcchH-----HHhhcCCccccceeeechhHHHhhh
Q psy7882           6 YRDCGVVVSAVDFGSGDNGTYLGFQCLQICRFV-----QKDFKGSFWDKLIVHTSTCTFENFI   63 (329)
Q Consensus         6 ~~giLLI~DEVqTGfGRTG~~fA~e~~GV~PDi-----~KaLgGG~~PigAv~~~~eI~d~~~   63 (329)
                      .+++++++|=+|+ +|-.  -.-.+.+  -.|+     -|.++|- .-+|++..+++..+...
T Consensus       165 ~~~~~~~vDa~qs-~g~~--pid~~~~--giD~~~~s~~K~l~gP-~G~g~l~vs~~~~~~~~  221 (382)
T d2bkwa1         165 SPETFFVVDAVCS-IGCE--EFEFDEW--GVDFALTASQKAIGAP-AGLSISLCSSRFMDYAL  221 (382)
T ss_dssp             CTTSEEEEECTTT-TTTS--CCCTTTT--TCSEEEEESSSTTCCC-SCEEEEEECHHHHHHHT
T ss_pred             ccceeeeeecccc-cccc--ccccccc--CeeEEeecccccCcCC-CchhhhhccHHHHhhhh
Confidence            3568899998888 3221  1111222  2452     1999653 24689999998876543

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=83.81  E-value=0.4  Score=43.42  Aligned_cols=20  Identities=10%  Similarity=-0.165  Sum_probs=16.5

Q ss_pred             ccccceEEehhHhhchhccc
Q psy7882           5 YYRDCGVVVSAVDFGSGDNG   24 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG   24 (329)
                      .+||+++|.|||...+...+
T Consensus       213 ~~~~~~ii~De~Y~~l~~~~  232 (412)
T d1ajsa_         213 KRRFLFPFFDSAYQGFASGN  232 (412)
T ss_dssp             HHHTCEEEEEESCTTTTTSC
T ss_pred             hhCCEEEEecHhhhhhhcCC
Confidence            46899999999999886544

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=83.08  E-value=0.22  Score=44.99  Aligned_cols=55  Identities=11%  Similarity=-0.142  Sum_probs=31.5

Q ss_pred             ccccceEEehhHhhchhccchhhh--h-cccC-----Ccch-HHHhhcC-CccccceeeechhHHH
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYLG--F-QCLQ-----ICRF-VQKDFKG-SFWDKLIVHTSTCTFE   60 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~fA--~-e~~G-----V~PD-i~KaLgG-G~~PigAv~~~~eI~d   60 (329)
                      ..+|+++|.||+..++...+....  . ...+     |.-. ++|.++- | +=+|.+++.....+
T Consensus       203 ~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~  267 (397)
T d3tata_         203 KARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAE  267 (397)
T ss_dssp             HHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHHHHTBTT-TCCBCCEEECSSTT
T ss_pred             hhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCcccccccC-ccccccccchhHHH
Confidence            467999999999998854332111  1 1111     1222 6787654 4 36777776654443

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=82.99  E-value=0.25  Score=44.21  Aligned_cols=23  Identities=4%  Similarity=-0.081  Sum_probs=18.8

Q ss_pred             CEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         172 NTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       172 nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      +.||+++.+..   |++|||.+++++
T Consensus       350 g~iRiS~~~~n---t~edid~l~~~l  372 (391)
T d1p3wa_         350 SSIRFSLGRFT---TEEEIDYTIELV  372 (391)
T ss_dssp             TEEEEECCTTC---CHHHHHHHHHHH
T ss_pred             CEEEEecCCCC---CHHHHHHHHHHH
Confidence            47999987754   689999999985

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=81.94  E-value=7  Score=33.33  Aligned_cols=46  Identities=15%  Similarity=0.020  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHCCceeeccCCCC-CEEEEeCccccCcCCHHHHHHHHhcc
Q psy7882         148 RHMTHILDSCKEHGLLLGRGGLSG-NTLTALQPKLLNYWTDFVGTPCLDCE  197 (329)
Q Consensus       148 ~~~~~~~~~l~e~GVLl~~~G~~~-nvIrl~PPL~It~~t~eeId~~l~~~  197 (329)
                      .....+...+.++|+.... |+.. ..+|+.   +....|.|||+.++++.
T Consensus       307 ~~~~~~~~~l~~~GI~~~~-G~~~~ggiRiS---~~~~~t~e~V~~Li~~~  353 (360)
T d1w23a_         307 ELNQQFLAKAKEQGFVGLN-GHRSVGGCRAS---IYNAVPIDACIALRELM  353 (360)
T ss_dssp             HHHHHHHHHHHHTTEESCB-CCTTTCSEEEE---CCTTSCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCeeee-CCCccCcEEEE---eeCCCCHHHHHHHHHHH
Confidence            3456788889999998754 3211 248876   23334789999999985

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=81.30  E-value=0.2  Score=45.31  Aligned_cols=58  Identities=7%  Similarity=-0.249  Sum_probs=34.5

Q ss_pred             ccccceEEehhHhhchhccchhh----hhcccCCcch------HHHhhcCCccccceeeechhHHHhh
Q psy7882           5 YYRDCGVVVSAVDFGSGDNGTYL----GFQCLQICRF------VQKDFKGSFWDKLIVHTSTCTFENF   62 (329)
Q Consensus         5 ~~~giLLI~DEVqTGfGRTG~~f----A~e~~GV~PD------i~KaLgGG~~PigAv~~~~eI~d~~   62 (329)
                      .+||+++|.||+..++...+...    ........+.      ++|.++-..+-+|.+++..++.+..
T Consensus       205 ~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~  272 (401)
T d7aata_         205 KKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEA  272 (401)
T ss_dssp             HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHH
T ss_pred             hcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccccceeeccccceeecchHHHHHH
Confidence            46899999999999986544211    1111111222      4566553224788888877766543