Psyllid ID: psy7978

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF
cccHHHHHHHcccEEEcccccccHHHHHccccEEEEEcccccccccccccccEEEEEcccccccccccccccEEEEEcccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHcccccccHHHHHHHcccccccccccccccccccHHHHHHcccccccEEEEEEEccccccccEEEEEEEccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccccccccccEEEEHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccEEEccccccccccccccccccccEEEcEEEEEEccccEEEEEccccccccccccccccccccEEccccEEEEcc
ccHHHHHHHcccEEEEcccccccHHHHHccccEEEEcccccccEcHHHcccccEEEEcccEEEEcccccccEEEEccEcHHHHcccccEEcccccccccHHHHHHHHHHHHHHHHHHcHHccccccccccccccccccccccccccccccccHHHHHHcccccHHHEEEcccccEEEccHHHHHHccccccEEEEEEEcccccccccEEEEEccccccHHHHccccccEEccEEEEcHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccEEcHHcHHHHHHHHHHHcHHHHHcccccEEEEEEcHHHHHHccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccEEEEcHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccEEEEEEEEEEccccEEEEEEccccccccccccccHccccEcccccEEEEcc
MWSSLQTFWLWVLanpsmsktkniQDVVKSADILVvgigqpeyvkgdwikpgavvidcginsvpdaskasgqklvgDVQYAEAKNVaswitpvpggvgpMTVAMLMNNTVLSAERYIDRllkpswnlhtlplnlqspvpsdidiaraqdpkdINQLAQEIGLHVSevssygrskaKISTEVLDRLKRVQDGKYIILFLKLLLLDFgytfacvrqpsqgptfgikggaagggysqvipmeefnlhltgDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPtilnikcrtsgkipdaVVLVTTVRALkmhgggpsvvsgqplkpeytentravlRGEDSFLLYCKLdsqylehppvtMLIYYTYTPAEWEIIRKAAKQagahdavvcenwakggagaADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMygvhkvdcpqpvLEKLQKLerlgygrlTVCMAKTalslsgdptikgvvppdyvlpihdvyvsaGAGFVVVIAGdiskmpglgtrpsiydididtrtgeieglf
MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHvsevssygrskakistevLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIkcrtsgkipdaVVLVTTVRALKmhgggpsvvsgqplkpEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTalslsgdptikGVVPPDYVLPIHDVYVSAGAGFVVVIAGDiskmpglgtrpsiydididtrtgeieglf
MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDgkyiilflklllldfgyTFACVRQPSQGPTFGIKggaagggYSQVIPMEEFNLHLTGDIHavtaannlaaaqldaRMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWakggagaadladavikaTELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF
****LQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDA***SGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSP******************LAQEIGLHVSEVSSYGR*KAKISTEVLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGG************YTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDT*********
*WSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSW*LHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF
MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF
MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWSSLQTFWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query542 2.2.26 [Sep-21-2011]
O96553 968 C-1-tetrahydrofolate synt yes N/A 0.512 0.287 0.639 1e-94
Q27772 933 C-1-tetrahydrofolate synt N/A N/A 0.520 0.302 0.604 1e-91
P11586 935 C-1-tetrahydrofolate synt yes N/A 0.522 0.302 0.572 3e-88
Q922D8 935 C-1-tetrahydrofolate synt yes N/A 0.522 0.302 0.582 4e-88
P27653 935 C-1-tetrahydrofolate synt yes N/A 0.522 0.302 0.576 2e-87
Q5R8P0 935 C-1-tetrahydrofolate synt yes N/A 0.522 0.302 0.569 4e-87
Q8WZJ7 937 C-1-tetrahydrofolate synt yes N/A 0.477 0.276 0.578 1e-76
P09440 975 C-1-tetrahydrofolate synt yes N/A 0.487 0.270 0.560 6e-74
O43007 972 C-1-tetrahydrofolate synt no N/A 0.481 0.268 0.510 6e-70
P07245 946 C-1-tetrahydrofolate synt no N/A 0.492 0.282 0.530 2e-64
>sp|O96553|C1TC_DROME C-1-tetrahydrofolate synthase, cytoplasmic OS=Drosophila melanogaster GN=pug PE=1 SV=4 Back     alignment and function desciption
 Score =  347 bits (891), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/297 (63%), Positives = 210/297 (70%), Gaps = 19/297 (6%)

Query: 9   WLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASK 68
           W         SKT+N++++ +SADILVVGIG  E VKG WIKPGAVVIDCGIN  PDASK
Sbjct: 220 WANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKPDASK 279

Query: 69  ASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLH 128
           ASG KLVGDV YAEA  VA  +TPVPGGVGPMTVAMLM NTV SA R+++RL K  W L 
Sbjct: 280 ASGSKLVGDVDYAEALQVAGHLTPVPGGVGPMTVAMLMKNTVRSAARFLERLAKSQWALQ 339

Query: 129 TLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRV 188
           TLPL  Q PVPSDI IARAQ PKDI  LA+EIGL   EVS YG  KAKIS  VL+RLK  
Sbjct: 340 TLPLKPQRPVPSDIVIARAQKPKDIAVLAKEIGLEAREVSLYGNKKAKISLSVLERLKDK 399

Query: 189 QDGKYII-------------------LFLKLLLLDFGYTFACVRQPSQGPTFGIKGGAAG 229
           + G Y++                   L   L       T A +RQPSQGPTFGIKGGAAG
Sbjct: 400 EVGHYVVVAGMTPTPLGEGKTTTLMGLVQALGAHKLRNTMAALRQPSQGPTFGIKGGAAG 459

Query: 230 GGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTI 286
           GGY+QVIPMEEFNLHLTGDIHAV+AANNL AAQLD R+FHE TQ D+ LY RLVP I
Sbjct: 460 GGYAQVIPMEEFNLHLTGDIHAVSAANNLLAAQLDTRIFHENTQKDKALYDRLVPAI 516

Drosophila melanogaster (taxid: 7227)
EC: 6EC: .EC: 3EC: .EC: 4EC: .EC: 3
>sp|Q27772|C1TC_SPOFR C-1-tetrahydrofolate synthase, cytoplasmic OS=Spodoptera frugiperda PE=2 SV=3 Back     alignment and function description
>sp|P11586|C1TC_HUMAN C-1-tetrahydrofolate synthase, cytoplasmic OS=Homo sapiens GN=MTHFD1 PE=1 SV=3 Back     alignment and function description
>sp|Q922D8|C1TC_MOUSE C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus GN=Mthfd1 PE=1 SV=4 Back     alignment and function description
>sp|P27653|C1TC_RAT C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus GN=Mthfd1 PE=1 SV=3 Back     alignment and function description
>sp|Q5R8P0|C1TC_PONAB C-1-tetrahydrofolate synthase, cytoplasmic OS=Pongo abelii GN=MTHFD1 PE=2 SV=3 Back     alignment and function description
>sp|Q8WZJ7|C1TC_SCHPO C-1-tetrahydrofolate synthase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC839.16 PE=3 SV=1 Back     alignment and function description
>sp|P09440|C1TM_YEAST C-1-tetrahydrofolate synthase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIS1 PE=1 SV=1 Back     alignment and function description
>sp|O43007|C1TM_SCHPO C-1-tetrahydrofolate synthase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ade9 PE=3 SV=3 Back     alignment and function description
>sp|P07245|C1TC_YEAST C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADE3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
322795648 937 hypothetical protein SINV_02960 [Solenop 0.501 0.290 0.649 4e-96
242004038 937 formate-tetrahydrofolate ligase, putativ 0.494 0.286 0.637 5e-95
328721083 939 PREDICTED: c-1-tetrahydrofolate synthase 0.523 0.302 0.619 2e-94
380027427 937 PREDICTED: c-1-tetrahydrofolate synthase 0.498 0.288 0.640 1e-93
312373367 695 hypothetical protein AND_17514 [Anophele 0.494 0.385 0.650 4e-93
345489471 886 PREDICTED: c-1-tetrahydrofolate synthase 0.501 0.306 0.621 4e-93
347968634 937 AGAP002830-PA [Anopheles gambiae str. PE 0.512 0.296 0.632 4e-93
321465603 936 hypothetical protein DAPPUDRAFT_198836 [ 0.501 0.290 0.625 5e-93
17137370 934 pugilist, isoform A [Drosophila melanoga 0.512 0.297 0.643 6e-93
60677839 934 RE42943p [Drosophila melanogaster] 0.512 0.297 0.643 6e-93
>gi|322795648|gb|EFZ18327.1| hypothetical protein SINV_02960 [Solenopsis invicta] Back     alignment and taxonomy information
 Score =  358 bits (919), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 189/291 (64%), Positives = 220/291 (75%), Gaps = 19/291 (6%)

Query: 19  SKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV 78
           SKTKN+ DVV+ ADILVVGIGQPE VKGDWIKPGAVVIDCGIN +PD +K SGQ+LVGDV
Sbjct: 199 SKTKNLPDVVRQADILVVGIGQPEMVKGDWIKPGAVVIDCGINPLPDPTKKSGQRLVGDV 258

Query: 79  QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPV 138
            Y EA  VAS+ITPVPGGVGPMTVAMLM NTV+SA+R   +LL   W L  L LNL  PV
Sbjct: 259 AYQEAAKVASYITPVPGGVGPMTVAMLMKNTVISAQRSAQKLLDNQWKLRPLKLNLVKPV 318

Query: 139 PSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIIL-- 196
           PSDIDI+R+Q+PK I  LA+EIGL  +E S YG  KAK+   VL+RL+  Q+GKY+++  
Sbjct: 319 PSDIDISRSQEPKPITVLAEEIGLGPNEFSPYGSKKAKVGLSVLERLRNQQNGKYVVVAG 378

Query: 197 ----------------FLKLLLLDFGY-TFACVRQPSQGPTFGIKGGAAGGGYSQVIPME 239
                            ++ L    G  +F  VRQPSQGPTFG+KGGAAGGGYSQVIPME
Sbjct: 379 ITPTPFGEGKSTTALGLVQALTAHKGINSFVNVRQPSQGPTFGVKGGAAGGGYSQVIPME 438

Query: 240 EFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQTDQQLYSRLVPTILNIK 290
           EFNLHLTGDIHAVTAANNL AAQ+DAR FHE+TQ+D+ LY RLVPTI  ++
Sbjct: 439 EFNLHLTGDIHAVTAANNLLAAQIDARYFHESTQSDKALYDRLVPTIKGVR 489

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242004038|ref|XP_002422948.1| formate-tetrahydrofolate ligase, putative [Pediculus humanus corporis] gi|212505864|gb|EEB10210.1| formate-tetrahydrofolate ligase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|328721083|ref|XP_001947803.2| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380027427|ref|XP_003697425.1| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Apis florea] Back     alignment and taxonomy information
>gi|312373367|gb|EFR21123.1| hypothetical protein AND_17514 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|345489471|ref|XP_001602774.2| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|347968634|ref|XP_312083.5| AGAP002830-PA [Anopheles gambiae str. PEST] gi|333467913|gb|EAA07766.5| AGAP002830-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|321465603|gb|EFX76603.1| hypothetical protein DAPPUDRAFT_198836 [Daphnia pulex] Back     alignment and taxonomy information
>gi|17137370|ref|NP_477254.1| pugilist, isoform A [Drosophila melanogaster] gi|24645718|ref|NP_731490.1| pugilist, isoform C [Drosophila melanogaster] gi|3916246|gb|AAC78847.1| C1-THF synthase homolog [Drosophila melanogaster] gi|23170927|gb|AAN13478.1| pugilist, isoform A [Drosophila melanogaster] gi|23170928|gb|AAN13479.1| pugilist, isoform C [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|60677839|gb|AAX33426.1| RE42943p [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
FB|FBgn0020385 968 pug "pugilist" [Drosophila mel 0.324 0.181 0.685 2.5e-135
UNIPROTKB|F1NMC3 935 MTHFD1 "Uncharacterized protei 0.335 0.194 0.549 7.4e-124
UNIPROTKB|A4FUD0 935 MTHFD1 "MTHFD1 protein" [Bos t 0.335 0.194 0.549 6e-121
UNIPROTKB|F1SA74 930 MTHFD1 "Uncharacterized protei 0.335 0.195 0.554 2.1e-120
UNIPROTKB|E2R2W7 935 MTHFD1 "Uncharacterized protei 0.335 0.194 0.554 3.6e-120
UNIPROTKB|G3V2B8 935 MTHFD1 "C-1-tetrahydrofolate s 0.317 0.183 0.587 5.2e-119
UNIPROTKB|P11586 935 MTHFD1 "C-1-tetrahydrofolate s 0.317 0.183 0.587 5.2e-119
ZFIN|ZDB-GENE-020905-4934 mthfd1b "methylenetetrahydrofo 0.464 0.269 0.420 9.4e-119
MGI|MGI:1342005 935 Mthfd1 "methylenetetrahydrofol 0.317 0.183 0.598 1.3e-118
UNIPROTKB|F1LW12 927 Mthfd1 "C-1-tetrahydrofolate s 0.317 0.185 0.593 9.1e-118
FB|FBgn0020385 pug "pugilist" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 593 (213.8 bits), Expect = 2.5e-135, Sum P(3) = 2.5e-135
 Identities = 122/178 (68%), Positives = 136/178 (76%)

Query:    11 WVLANPSM--SKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASK 68
             W  A  ++  SKT+N++++ +SADILVVGIG  E VKG WIKPGAVVIDCGIN  PDASK
Sbjct:   220 WANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKPDASK 279

Query:    69 ASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLH 128
             ASG KLVGDV YAEA  VA  +TPVPGGVGPMTVAMLM NTV SA R+++RL K  W L 
Sbjct:   280 ASGSKLVGDVDYAEALQVAGHLTPVPGGVGPMTVAMLMKNTVRSAARFLERLAKSQWALQ 339

Query:   129 TLPLNLQSPVPSDIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLK 186
             TLPL  Q PVPSDI IARAQ PKDI  LA+EIGL   EVS YG  KAKIS  VL+RLK
Sbjct:   340 TLPLKPQRPVPSDIVIARAQKPKDIAVLAKEIGLEAREVSLYGNKKAKISLSVLERLK 397
GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=ISS;IBA
GO:0004477 "methenyltetrahydrofolate cyclohydrolase activity" evidence=ISS;IBA
GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=ISS;IBA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
GO:0006730 "one-carbon metabolic process" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
UNIPROTKB|F1NMC3 MTHFD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|A4FUD0 MTHFD1 "MTHFD1 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SA74 MTHFD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2R2W7 MTHFD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G3V2B8 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P11586 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020905-4 mthfd1b "methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1342005 Mthfd1 "methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1LW12 Mthfd1 "C-1-tetrahydrofolate synthase, cytoplasmic" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q922D8C1TC_MOUSE6, ., 3, ., 4, ., 30.58270.52210.3026yesN/A
P09440C1TM_YEAST6, ., 3, ., 4, ., 30.56090.48700.2707yesN/A
Q5R8P0C1TC_PONAB6, ., 3, ., 4, ., 30.56950.52210.3026yesN/A
P11586C1TC_HUMAN6, ., 3, ., 4, ., 30.57280.52210.3026yesN/A
Q8WZJ7C1TC_SCHPO6, ., 3, ., 4, ., 30.57890.47780.2764yesN/A
O96553C1TC_DROME6, ., 3, ., 4, ., 30.63970.51290.2871yesN/A
P27653C1TC_RAT6, ., 3, ., 4, ., 30.57610.52210.3026yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.4.30.824
3rd Layer3.5.40.766
3rd Layer1.5.10.766
4th Layer1.5.1.50.824
3rd Layer6.3.40.766
3rd Layer3.5.4.90.824

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
pfam01268557 pfam01268, FTHFS, Formate--tetrahydrofolate ligase 2e-91
cd00477524 cd00477, FTHFS, Formyltetrahydrofolate synthetase 1e-80
PLN02759637 PLN02759, PLN02759, Formate--tetrahydrofolate liga 2e-76
PRK13507587 PRK13507, PRK13507, formate--tetrahydrofolate liga 2e-76
COG2759554 COG2759, MIS1, Formyltetrahydrofolate synthetase [ 6e-74
PRK13505557 PRK13505, PRK13505, formate--tetrahydrofolate liga 2e-73
PTZ00386625 PTZ00386, PTZ00386, formyl tetrahydrofolate synthe 8e-73
pfam01268 557 pfam01268, FTHFS, Formate--tetrahydrofolate ligase 8e-63
PLN02759 637 PLN02759, PLN02759, Formate--tetrahydrofolate liga 9e-63
PTZ00386 625 PTZ00386, PTZ00386, formyl tetrahydrofolate synthe 2e-61
PRK13506578 PRK13506, PRK13506, formate--tetrahydrofolate liga 1e-58
COG2759 554 COG2759, MIS1, Formyltetrahydrofolate synthetase [ 1e-53
cd00477 524 cd00477, FTHFS, Formyltetrahydrofolate synthetase 1e-52
PRK13506 578 PRK13506, PRK13506, formate--tetrahydrofolate liga 1e-50
pfam02882160 pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydro 2e-48
cd01080168 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding 4e-47
PRK13505 557 PRK13505, PRK13505, formate--tetrahydrofolate liga 2e-43
PRK10792285 PRK10792, PRK10792, bifunctional 5,10-methylene-te 3e-43
PRK14188296 PRK14188, PRK14188, bifunctional 5,10-methylene-te 2e-42
COG0190283 COG0190, FolD, 5,10-methylene-tetrahydrofolate deh 8e-42
PLN02516299 PLN02516, PLN02516, methylenetetrahydrofolate dehy 6e-38
PRK14190284 PRK14190, PRK14190, bifunctional 5,10-methylene-te 1e-36
PLN02616364 PLN02616, PLN02616, tetrahydrofolate dehydrogenase 2e-36
PRK14186297 PRK14186, PRK14186, bifunctional 5,10-methylene-te 2e-34
PRK14174295 PRK14174, PRK14174, bifunctional 5,10-methylene-te 1e-33
PRK14187294 PRK14187, PRK14187, bifunctional 5,10-methylene-te 1e-32
PRK13507 587 PRK13507, PRK13507, formate--tetrahydrofolate liga 2e-32
PRK14189285 PRK14189, PRK14189, bifunctional 5,10-methylene-te 3e-32
PRK14185293 PRK14185, PRK14185, bifunctional 5,10-methylene-te 2e-31
PRK14191285 PRK14191, PRK14191, bifunctional 5,10-methylene-te 8e-31
PRK14179284 PRK14179, PRK14179, bifunctional 5,10-methylene-te 7e-30
PLN02897345 PLN02897, PLN02897, tetrahydrofolate dehydrogenase 3e-29
PRK14173287 PRK14173, PRK14173, bifunctional 5,10-methylene-te 1e-27
PRK14194301 PRK14194, PRK14194, bifunctional 5,10-methylene-te 2e-27
PRK14167297 PRK14167, PRK14167, bifunctional 5,10-methylene-te 3e-27
PRK14168297 PRK14168, PRK14168, bifunctional 5,10-methylene-te 5e-27
PRK14184286 PRK14184, PRK14184, bifunctional 5,10-methylene-te 1e-26
PRK14178279 PRK14178, PRK14178, bifunctional 5,10-methylene-te 2e-25
PRK14192283 PRK14192, PRK14192, bifunctional 5,10-methylene-te 7e-25
PRK14169282 PRK14169, PRK14169, bifunctional 5,10-methylene-te 4e-24
PRK14183281 PRK14183, PRK14183, bifunctional 5,10-methylene-te 5e-24
PRK14182282 PRK14182, PRK14182, bifunctional 5,10-methylene-te 1e-23
PRK14193284 PRK14193, PRK14193, bifunctional 5,10-methylene-te 1e-23
PRK14172278 PRK14172, PRK14172, bifunctional 5,10-methylene-te 2e-23
PRK14170284 PRK14170, PRK14170, bifunctional 5,10-methylene-te 2e-22
PRK14166282 PRK14166, PRK14166, bifunctional 5,10-methylene-te 2e-22
PRK14176287 PRK14176, PRK14176, bifunctional 5,10-methylene-te 2e-22
PRK14175286 PRK14175, PRK14175, bifunctional 5,10-methylene-te 3e-22
PRK14177284 PRK14177, PRK14177, bifunctional 5,10-methylene-te 3e-22
PRK14181287 PRK14181, PRK14181, bifunctional 5,10-methylene-te 4e-22
cd05212140 cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) b 1e-21
PRK14171288 PRK14171, PRK14171, bifunctional 5,10-methylene-te 2e-21
PRK14180282 PRK14180, PRK14180, bifunctional 5,10-methylene-te 7e-19
cd01079197 cd01079, NAD_bind_m-THF_DH, NAD binding domain of 5e-05
>gnl|CDD|216402 pfam01268, FTHFS, Formate--tetrahydrofolate ligase Back     alignment and domain information 
 Score =  290 bits (744), Expect = 2e-91
 Identities = 117/265 (44%), Positives = 158/265 (59%), Gaps = 27/265 (10%)

Query: 287 LNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLY 346
            +IKCR SG  PDAVVLV TVRALKMHGG               EN  A+ +G      +
Sbjct: 311 FDIKCRKSGLKPDAVVLVATVRALKMHGGVA-------KDDLTEENLEALEKG------F 357

Query: 347 CKLD------SQYLEHPPVTMLI--YYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGA 398
             L+       ++    PV + I  + T T AE  ++R+  ++AGA +A V E+WAKGG 
Sbjct: 358 ANLEKHIENVKKF--GVPVVVAINRFPTDTDAELALVRELCEEAGA-EAAVSEHWAKGGE 414

Query: 399 GAADLADAVIKAT-ELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQK 457
           GA +LA+AV++A  E +   FK LYD+   L  KI+T+A E+YG   V+      ++L +
Sbjct: 415 GAIELAEAVVEACIEEQPSNFKPLYDLELSLEEKIETIATEIYGADGVEFSPKAKKQLAR 474

Query: 458 LERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKM 517
           +E+LG+G L VCMAKT  SLS DP +KG  P  + LP+ +V +SAGAGF+V + GDI  M
Sbjct: 475 IEKLGFGHLPVCMAKTQYSLSDDPKLKG-APTGFTLPVREVRLSAGAGFIVALTGDIMTM 533

Query: 518 PGLGTRPSIYDIDIDTRTGEIEGLF 542
           PGL   P+  +IDID   GEI GLF
Sbjct: 534 PGLPKVPAAENIDID-EDGEIVGLF 557

Length = 557
>gnl|CDD|238266 cd00477, FTHFS, Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate Back     alignment and domain information
>gnl|CDD|178359 PLN02759, PLN02759, Formate--tetrahydrofolate ligase Back     alignment and domain information
>gnl|CDD|184098 PRK13507, PRK13507, formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>gnl|CDD|225354 COG2759, MIS1, Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|237403 PRK13505, PRK13505, formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>gnl|CDD|240394 PTZ00386, PTZ00386, formyl tetrahydrofolate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|216402 pfam01268, FTHFS, Formate--tetrahydrofolate ligase Back     alignment and domain information
>gnl|CDD|178359 PLN02759, PLN02759, Formate--tetrahydrofolate ligase Back     alignment and domain information
>gnl|CDD|240394 PTZ00386, PTZ00386, formyl tetrahydrofolate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237404 PRK13506, PRK13506, formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>gnl|CDD|225354 COG2759, MIS1, Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|238266 cd00477, FTHFS, Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate Back     alignment and domain information
>gnl|CDD|237404 PRK13506, PRK13506, formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>gnl|CDD|217267 pfam02882, THF_DHG_CYH_C, Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Back     alignment and domain information
>gnl|CDD|133448 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>gnl|CDD|237403 PRK13505, PRK13505, formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>gnl|CDD|236760 PRK10792, PRK10792, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184558 PRK14188, PRK14188, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|223268 COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|178131 PLN02516, PLN02516, methylenetetrahydrofolate dehydrogenase (NADP+) Back     alignment and domain information
>gnl|CDD|184560 PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|215332 PLN02616, PLN02616, tetrahydrofolate dehydrogenase/cyclohydrolase, putative Back     alignment and domain information
>gnl|CDD|237636 PRK14186, PRK14186, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172662 PRK14174, PRK14174, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172675 PRK14187, PRK14187, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184098 PRK13507, PRK13507, formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>gnl|CDD|184559 PRK14189, PRK14189, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184556 PRK14185, PRK14185, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172679 PRK14191, PRK14191, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|237634 PRK14179, PRK14179, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|178485 PLN02897, PLN02897, tetrahydrofolate dehydrogenase/cyclohydrolase, putative Back     alignment and domain information
>gnl|CDD|184551 PRK14173, PRK14173, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172682 PRK14194, PRK14194, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184549 PRK14167, PRK14167, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|237633 PRK14168, PRK14168, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|237635 PRK14184, PRK14184, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172666 PRK14178, PRK14178, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184561 PRK14192, PRK14192, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184550 PRK14169, PRK14169, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184555 PRK14183, PRK14183, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172670 PRK14182, PRK14182, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|237637 PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172660 PRK14172, PRK14172, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172658 PRK14170, PRK14170, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172654 PRK14166, PRK14166, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184553 PRK14176, PRK14176, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|184552 PRK14175, PRK14175, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172665 PRK14177, PRK14177, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172669 PRK14181, PRK14181, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|133451 cd05212, NAD_bind_m-THF_DH_Cyclohyd_like, NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>gnl|CDD|172659 PRK14171, PRK14171, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|172668 PRK14180, PRK14180, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|133447 cd01079, NAD_bind_m-THF_DH, NAD binding domain of methylene-tetrahydrofolate dehydrogenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 542
KOG4230|consensus935 100.0
PRK13507587 formate--tetrahydrofolate ligase; Provisional 100.0
PLN02759637 Formate--tetrahydrofolate ligase 100.0
PF01268557 FTHFS: Formate--tetrahydrofolate ligase; InterPro: 100.0
PTZ00386625 formyl tetrahydrofolate synthetase; Provisional 100.0
COG2759554 MIS1 Formyltetrahydrofolate synthetase [Nucleotide 100.0
PRK13506578 formate--tetrahydrofolate ligase; Provisional 100.0
PRK13505557 formate--tetrahydrofolate ligase; Provisional 100.0
cd00477524 FTHFS Formyltetrahydrofolate synthetase (FTHFS) ca 100.0
COG0190283 FolD 5,10-methylene-tetrahydrofolate dehydrogenase 100.0
PLN02616364 tetrahydrofolate dehydrogenase/cyclohydrolase, put 100.0
PLN02897345 tetrahydrofolate dehydrogenase/cyclohydrolase, put 100.0
PRK14185293 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14171288 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PLN02516299 methylenetetrahydrofolate dehydrogenase (NADP+) 100.0
PRK14166282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14170284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14169282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14181287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14167297 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PF02882160 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl 100.0
PRK14182282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14187294 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14180282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14172278 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14186297 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14168297 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14190284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14177284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14183281 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14193284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14173287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14184286 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14191285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14189285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14174295 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14176287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK10792285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14179284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14178279 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14175286 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
KOG0089|consensus309 100.0
PRK14194301 bifunctional 5,10-methylene-tetrahydrofolate dehyd 100.0
PRK14188296 bifunctional 5,10-methylene-tetrahydrofolate dehyd 99.98
PRK14192283 bifunctional 5,10-methylene-tetrahydrofolate dehyd 99.97
cd05212140 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom 99.96
cd01079197 NAD_bind_m-THF_DH NAD binding domain of methylene- 99.96
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 99.9
PRK08306296 dipicolinate synthase subunit A; Reviewed 98.66
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 98.14
PTZ00075476 Adenosylhomocysteinase; Provisional 97.47
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 96.2
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 96.06
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 95.13
PRK14982340 acyl-ACP reductase; Provisional 93.58
PF02423313 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst 93.33
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 92.77
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 92.72
PLN02928347 oxidoreductase family protein 92.65
PRK06823315 ornithine cyclodeaminase; Validated 92.63
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 92.15
PRK06407301 ornithine cyclodeaminase; Provisional 92.04
PRK07589346 ornithine cyclodeaminase; Validated 91.84
TIGR02992326 ectoine_eutC ectoine utilization protein EutC. Mem 91.5
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 91.1
TIGR01327525 PGDH D-3-phosphoglycerate dehydrogenase. This mode 90.92
TIGR02371325 ala_DH_arch alanine dehydrogenase, Archaeoglobus f 90.87
PRK06436303 glycerate dehydrogenase; Provisional 90.7
COG5322351 Predicted dehydrogenase [General function predicti 90.54
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 89.89
PRK13243333 glyoxylate reductase; Reviewed 89.88
PRK15469312 ghrA bifunctional glyoxylate/hydroxypyruvate reduc 89.83
PRK07574385 formate dehydrogenase; Provisional 89.52
PRK08605332 D-lactate dehydrogenase; Validated 89.42
PRK12480330 D-lactate dehydrogenase; Provisional 89.27
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 88.94
PRK08618325 ornithine cyclodeaminase; Validated 88.25
PRK13940414 glutamyl-tRNA reductase; Provisional 87.96
PRK06932314 glycerate dehydrogenase; Provisional 87.71
TIGR01692288 HIBADH 3-hydroxyisobutyrate dehydrogenase. This en 86.34
PRK13581526 D-3-phosphoglycerate dehydrogenase; Provisional 86.29
COG2084286 MmsB 3-hydroxyisobutyrate dehydrogenase and relate 86.24
PRK08291330 ectoine utilization protein EutC; Validated 86.12
PRK06199379 ornithine cyclodeaminase; Validated 86.03
PRK08410311 2-hydroxyacid dehydrogenase; Provisional 85.93
PRK07340304 ornithine cyclodeaminase; Validated 85.47
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 85.46
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 85.4
COG2423330 Predicted ornithine cyclodeaminase, mu-crystallin 85.28
PRK11199374 tyrA bifunctional chorismate mutase/prephenate deh 85.27
TIGR01035417 hemA glutamyl-tRNA reductase. This enzyme, togethe 84.8
PLN02494477 adenosylhomocysteinase 84.61
PRK06487317 glycerate dehydrogenase; Provisional 84.42
TIGR01724341 hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome 84.19
PRK06141314 ornithine cyclodeaminase; Validated 83.35
PRK00257381 erythronate-4-phosphate dehydrogenase; Validated 83.26
PRK00045423 hemA glutamyl-tRNA reductase; Reviewed 83.2
PLN00203519 glutamyl-tRNA reductase 83.12
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 82.72
PRK06046326 alanine dehydrogenase; Validated 82.62
PRK11790409 D-3-phosphoglycerate dehydrogenase; Provisional 82.5
PLN03139386 formate dehydrogenase; Provisional 82.38
PRK15438378 erythronate-4-phosphate dehydrogenase PdxB; Provis 81.56
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 81.29
PRK11559296 garR tartronate semialdehyde reductase; Provisiona 81.25
TIGR01505291 tartro_sem_red 2-hydroxy-3-oxopropionate reductase 80.38
COG0373414 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] 80.37
>KOG4230|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.3e-191  Score=1501.72  Aligned_cols=532  Identities=53%  Similarity=0.865  Sum_probs=521.2

Q ss_pred             CchHHHHHHHhCCCe--eecCCCCCHHHHhhhCCEEEEeccCCCceecCcccCCeEEEeccccccCCCccCCCCeeeecc
Q psy7978           1 MWSSLQTFWLWVLAN--PSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDASKASGQKLVGDV   78 (542)
Q Consensus         1 vgkPLa~LL~~~~AT--icHs~T~nl~~~~k~ADIVIsAvG~p~lI~~d~ik~GavVIDVGin~~~d~~~~~~~kl~GDV   78 (542)
                      ||.|++.||.+.|||  +|||+|+||.+++.+|||||+|+|+|+|+++||||||++|||||||+++|.++++|+|++|||
T Consensus       174 VG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvpD~~Kksg~klvGDV  253 (935)
T KOG4230|consen  174 VGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVPDPSKKSGFKLVGDV  253 (935)
T ss_pred             cCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccCCCCCcccceEeeec
Confidence            799999999999999  999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccceEeecCCCCcchhhHHHHHHhHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCchHHHhhcCCCCHHHHHH
Q psy7978          79 QYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSWNLHTLPLNLQSPVPSDIDIARAQDPKDINQLAQ  158 (542)
Q Consensus        79 df~~v~~~a~~iTPVPGGVGpmTvamL~~N~v~aa~~~~~~~~~~~W~l~~~~l~~~~~m~sd~eia~~~~~~~I~~ia~  158 (542)
                      |||+++++|++||||||||||||+||||+|++++|+|+..+++ ..|.++++.|...+|+||||||+|++++++|.++|+
T Consensus       254 dfe~Akevas~ITPVPGGVGPMTVAMLmqNtveaAKR~r~es~-~~~~i~~~pl~l~tpvpsdidisrsq~pk~i~~la~  332 (935)
T KOG4230|consen  254 DFESAKEVASFITPVPGGVGPMTVAMLMQNTVEAAKRQREESK-KKRKIDLLPLKLKTPVPSDIDISRSQEPKLIGQLAK  332 (935)
T ss_pred             chHhhhhhhhccccCCCCcchHHHHHHHHHHHHHHHHHHHhcc-ccCcCCCCccccCCCCCcccchhhccCcchHHHHHH
Confidence            9999999999999999999999999999999999999987763 589999999999999999999999999999999999


Q ss_pred             HcCCCccccccccCceeEechhhhhhhhcCCCCcEEeehH------------------HHHHhhc-ccceeeeecCCCCC
Q psy7978         159 EIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFL------------------KLLLLDF-GYTFACVRQPSQGP  219 (542)
Q Consensus       159 ~lgl~~~~l~~yG~~kAKi~~~~l~~~~~~~~gklilVTa------------------~aL~~~l-~~~~~~lRePSlGP  219 (542)
                      ++||.+.|||.||.|||||++++++|++.|++||||+||+                  |||. .| |.+++|+||||+||
T Consensus       333 e~gi~s~ele~yg~~kakv~l~v~erl~hr~dg~yvvvsgitptp~gegkst~t~glvqal~-~l~k~~iacvrqpsqgp  411 (935)
T KOG4230|consen  333 ELGIYSHELELYGHYKAKVNLAVLERLKHRKDGKYVVVSGITPTPLGEGKSTTTAGLVQALG-ALGKLAIACVRQPSQGP  411 (935)
T ss_pred             HhchhhHHHHhhcchhhhcCHHHHHHHhccCCCcEEEEeccCCCCCCCCcchhHHHHHHHHH-hhCCcceeeecCCCcCC
Confidence            9999999999999999999999999999999999999999                  9997 69 99999999999999


Q ss_pred             cccccccCCCCCceeeeeCcccccccccchhhHHHhhHHHHHHHHhhHhccc----------------------------
Q psy7978         220 TFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEA----------------------------  271 (542)
Q Consensus       220 vFGiKGGAaGGG~sqv~Pme~iNLHfTGD~hAIt~A~NLlaA~iDn~i~~~n----------------------------  271 (542)
                      +||+||||||||||||+||||||||+||||||||+|||||||+||.||||+|                            
T Consensus       412 tfgvkggaagggysq~ipmdefnlhltgdihaitaannllaaaidtrmfhe~tq~daal~krlvp~kng~r~f~~~m~rr  491 (935)
T KOG4230|consen  412 TFGVKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRMFHENTQSDAALYKRLVPVKNGKRKFTPSMIRR  491 (935)
T ss_pred             ccccccccCCCccceeeehhhcccccccchhhhhhhhHHHHHHHHHHHHhhcccchHHHHHhhccccCCeeecCHHHHHH
Confidence            9999999999999999999999999999999999999999999999999997                            


Q ss_pred             -----------------------CCC---CceEeeeecccc---------------------------------------
Q psy7978         272 -----------------------TQT---DQQLYSRLVPTI---------------------------------------  286 (542)
Q Consensus       272 -----------------------~l~---d~i~w~R~~d~n---------------------------------------  286 (542)
                                             +|+   |+|.|+||+|+|                                       
T Consensus       492 lkrl~i~k~dp~~lt~ee~~~farlnidpdtit~~rvldvndrflr~itig~a~tekg~tr~t~fdisvase~mailals  571 (935)
T KOG4230|consen  492 LKRLGIEKTDPEDLTPEEIKKFARLNIDPDTITINRVLDVNDRFLRQITIGQAPTEKGHTRTTGFDISVASECMAILALS  571 (935)
T ss_pred             HHHhccccCCcccCCHHHHHHhHcccCCCCeeEEEEEeccchhhhhheecccCccccCcccccccceehHHHHHHHHHHh
Confidence                                   244   599999999999                                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy7978         287 --------------------------------------------------------------------------------  286 (542)
Q Consensus       287 --------------------------------------------------------------------------------  286 (542)
                                                                                                      
T Consensus       572 ~dl~dm~erlgrmvva~dk~g~pvtaedlgv~galtvllkdaikpnlmqtlegtpv~vhagpfanisigassiiadrial  651 (935)
T KOG4230|consen  572 KDLNDMKERLGRMVVAADKYGEPVTAEDLGVSGALTVLLKDAIKPNLMQTLEGTPVFVHAGPFANISIGASSIIADRIAL  651 (935)
T ss_pred             ccHHHHHHHhhcEEEeecCCCCcccHHhcCcchhHHHHHHhhcchhHHhhccCCeeEEecccccccccchHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------------------------------cccccCCCCCCCCEEEEEeeehhhhhcCCCCCCCCCCCCCcccCccCHHH
Q psy7978         287 ------------------------------LNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAV  336 (542)
Q Consensus       287 ------------------------------~dIKCR~sGl~PdavVlVATvRALK~HGG~~~~~~g~p~~~~l~~en~~a  336 (542)
                                                    ||||||.|||.||+|||||||||||+|||.|.+.+|+|||++|.+||++.
T Consensus       652 klvgte~~~keagyvvteagf~~dmgmekffnikcr~sgl~p~avvlvatvralk~hgggp~v~pg~plp~~y~~en~dl  731 (935)
T KOG4230|consen  652 KLVGTESRPKEAGYVVTEAGFASDMGMEKFFNIKCRYSGLVPNAVVLVATVRALKLHGGGPKVKPGQPLPEEYTEENLDL  731 (935)
T ss_pred             HhcCCCCCcccCceEEEecccccccchhheeeeeeecCCCCCceEEEeehhHHHHhcCCCCCCCCCCCCcHHHHHhhHHH
Confidence                                          99999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCcccccCcccc-----CCCCCcE-EEeCCCCCCHHHHHHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHH
Q psy7978         337 LRGEDSFLLYCKLDSQ-----YLEHPPV-TMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKA  410 (542)
Q Consensus       337 l~~G~~~~~~~NL~~H-----~fGvpvV-AiN~F~tDT~~Ei~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a  410 (542)
                      +++|     |+||.||     +||+||| |||+|.|||+.||+.|++.+.++|+++++-|+||++||+||++||++|+++
T Consensus       732 v~kg-----~snl~k~i~n~~~fgipvvvain~f~tds~~ei~~ir~~al~aga~dav~snhwaeggkgai~la~av~~a  806 (935)
T KOG4230|consen  732 VEKG-----CSNLVKQIENIKKFGIPVVVAINKFKTDSEKEIEAIREAALEAGAFDAVTSNHWAEGGKGAIELAKAVITA  806 (935)
T ss_pred             HHHH-----HHHHHHHHHhHHhcCCCEEEEeccccCCCHHHHHHHHHHHHhcCCcccccccchhhcCccHHHHHHHHHHH
Confidence            9999     9999999     7999999 999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCcccccCCCCCHHHHHHHHHHHHhcCCceecChHHHHHHHHHHHcCCCCCceeEEccCCCCCCCCCCCCCCCCC
Q psy7978         411 TELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPD  490 (542)
Q Consensus       411 ~~~~~~~f~~lY~~~~~l~eKI~~IA~~IYGA~~V~~s~~A~~~l~~~e~~G~~~lPVCmAKTqySlS~dp~~~G~~P~~  490 (542)
                      |+.++ +|++|||.+.|+|+||+.||+++|||++|++||+|+++++.|.++||++||||||||||||||||.++|+ |+|
T Consensus       807 ~~~~s-~f~llydv~~~iedk~~~iaqkmyga~~ie~~p~aq~ki~~y~kqgfgnlpiciaktqyslshdp~~kgv-pt~  884 (935)
T KOG4230|consen  807 CDSPS-KFRLLYDVNSSIEDKLTIIAQKMYGAAGIELSPEAQEKIDTYKKQGFGNLPICIAKTQYSLSHDPELKGV-PTG  884 (935)
T ss_pred             hcCCc-ceeEEEecCccHHHHHHHHHHHHcCCccceeCHHHHHHHHHHHhccCCCCceeeeecccccccCccccCC-CCC
Confidence            98776 8999999999999999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             ceEEeeEEEeecCCceEEEeecccccCCCCCCCCceeeeeeeCCCCeeeecC
Q psy7978         491 YVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGLF  542 (542)
Q Consensus       491 f~~~vrdv~~~~GAgfiv~~~g~i~tMPGLp~~Paa~~idvd~~~g~i~GL~  542 (542)
                      |++||||+|+|+||||+|+|++.|+||||||+.|++++|||| ++|+|.|||
T Consensus       885 ft~pird~r~s~gagflyplaa~iqtipglpt~p~y~~idi~-~~gei~gl~  935 (935)
T KOG4230|consen  885 FTVPIRDMRLSAGAGFLYPLAAEIQTIPGLPTYPAYMNIDID-ENGEIVGLF  935 (935)
T ss_pred             ceeechhhhcccCCcchhhhhHHhhcCCCCCCccceeeeeec-CCCcccccC
Confidence            999999999999999999999999999999999999999999 789999998

>PRK13507 formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>PLN02759 Formate--tetrahydrofolate ligase Back     alignment and domain information
>PF01268 FTHFS: Formate--tetrahydrofolate ligase; InterPro: IPR000559 Formate--tetrahydrofolate ligase (6 Back     alignment and domain information
>PTZ00386 formyl tetrahydrofolate synthetase; Provisional Back     alignment and domain information
>COG2759 MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13506 formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>PRK13505 formate--tetrahydrofolate ligase; Provisional Back     alignment and domain information
>cd00477 FTHFS Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate Back     alignment and domain information
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] Back     alignment and domain information
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative Back     alignment and domain information
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative Back     alignment and domain information
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) Back     alignment and domain information
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) Back     alignment and domain information
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>KOG0089|consensus Back     alignment and domain information
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>PTZ00075 Adenosylhomocysteinase; Provisional Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK14982 acyl-ACP reductase; Provisional Back     alignment and domain information
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline [] Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PLN02928 oxidoreductase family protein Back     alignment and domain information
>PRK06823 ornithine cyclodeaminase; Validated Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PRK06407 ornithine cyclodeaminase; Provisional Back     alignment and domain information
>PRK07589 ornithine cyclodeaminase; Validated Back     alignment and domain information
>TIGR02992 ectoine_eutC ectoine utilization protein EutC Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase Back     alignment and domain information
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type Back     alignment and domain information
>PRK06436 glycerate dehydrogenase; Provisional Back     alignment and domain information
>COG5322 Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>PRK13243 glyoxylate reductase; Reviewed Back     alignment and domain information
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional Back     alignment and domain information
>PRK07574 formate dehydrogenase; Provisional Back     alignment and domain information
>PRK08605 D-lactate dehydrogenase; Validated Back     alignment and domain information
>PRK12480 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>PRK08618 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK13940 glutamyl-tRNA reductase; Provisional Back     alignment and domain information
>PRK06932 glycerate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase Back     alignment and domain information
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional Back     alignment and domain information
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] Back     alignment and domain information
>PRK08291 ectoine utilization protein EutC; Validated Back     alignment and domain information
>PRK06199 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK08410 2-hydroxyacid dehydrogenase; Provisional Back     alignment and domain information
>PRK07340 ornithine cyclodeaminase; Validated Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01035 hemA glutamyl-tRNA reductase Back     alignment and domain information
>PLN02494 adenosylhomocysteinase Back     alignment and domain information
>PRK06487 glycerate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein Back     alignment and domain information
>PRK06141 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed Back     alignment and domain information
>PLN00203 glutamyl-tRNA reductase Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>PRK06046 alanine dehydrogenase; Validated Back     alignment and domain information
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional Back     alignment and domain information
>PLN03139 formate dehydrogenase; Provisional Back     alignment and domain information
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK11559 garR tartronate semialdehyde reductase; Provisional Back     alignment and domain information
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase Back     alignment and domain information
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
1dia_A306 Human Methylenetetrahydrofolate Dehydrogenase Cyclo 2e-34
1a4i_A301 Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE 5e-34
1fpm_A557 Monovalent Cation Binding Sites In N10-formyltetrah 5e-28
1eg7_A557 The Crystal Structure Of Formyltetrahydrofolate Syn 5e-28
3do6_A543 Crystal Structure Of Putative Formyltetrahydrofolat 8e-26
4a26_A300 The Crystal Structure Of Leishmania Major N5,N10- M 2e-25
4a5o_A286 Crystal Structure Of Pseudomonas Aeruginosa N5, N10 3e-22
1b0a_A288 5,10, Methylene-Tetrahydropholate DehydrogenaseCYCL 6e-22
3l07_A285 Methylenetetrahydrofolate DehydrogenaseMETHENYLTETR 6e-17
4b4u_A303 Crystal Structure Of Acinetobacter Baumannii N5, N1 9e-17
3p2o_A285 Crystal Structure Of Fold Bifunctional Protein From 1e-15
3ngl_A276 Crystal Structure Of Bifunctional 5,10-Methylenetet 2e-15
2c2x_A281 Three Dimensional Structure Of Bifunctional Methyle 6e-11
>pdb|1DIA|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase Cyclohydrolase Complexed With Nadp And Inhibitor Ly249543 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/118 (58%), Positives = 84/118 (71%)
Query: 8   FWLWVLANPSMSKTKNIQDVVKSADILVVGIGQPEYVKGDWIKPGAVVIDCGINSVPDAS 67
            W         SKT ++ + V   DILVV  GQPE VKG+WIKPGA+VIDCGIN VPD  
Sbjct: 186 LWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDK 245
Query: 68  KASGQKLVGDVQYAEAKNVASWITPVPGGVGPMTVAMLMNNTVLSAERYIDRLLKPSW 125
           K +G+K+VGDV Y EAK  AS+ITPVPGGVGPMTVAMLM +TV SA+R++++     W
Sbjct: 246 KPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLEKFKPGKW 303
>pdb|1A4I|A Chain A, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE Length = 301 Back     alignment and structure
>pdb|1FPM|A Chain A, Monovalent Cation Binding Sites In N10-formyltetrahydrofolate Synthetase From Moorella Thermoacetica Length = 557 Back     alignment and structure
>pdb|1EG7|A Chain A, The Crystal Structure Of Formyltetrahydrofolate Synthetase From Moorella Thermoacetica Length = 557 Back     alignment and structure
>pdb|3DO6|A Chain A, Crystal Structure Of Putative Formyltetrahydrofolate Synthetase (Tm1766) From Thermotoga Maritima At 1.85 A Resolution Length = 543 Back     alignment and structure
>pdb|4A26|A Chain A, The Crystal Structure Of Leishmania Major N5,N10- Methylenetetrahydrofolate DehydrogenaseCYCLOHYDROLASE Length = 300 Back     alignment and structure
>pdb|4A5O|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa N5, N10- Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Length = 286 Back     alignment and structure
>pdb|1B0A|A Chain A, 5,10, Methylene-Tetrahydropholate DehydrogenaseCYCLOHYDROLASE FROM E COLI Length = 288 Back     alignment and structure
>pdb|3L07|A Chain A, Methylenetetrahydrofolate DehydrogenaseMETHENYLTETRAHYDROFOLATE Cyclohydrolase, Putative Bifunctional Protein Fold From Francisella Tularensis. Length = 285 Back     alignment and structure
>pdb|4B4U|A Chain A, Crystal Structure Of Acinetobacter Baumannii N5, N10-Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase (Fold) Complexed With Nadp Cofactor Length = 303 Back     alignment and structure
>pdb|3P2O|A Chain A, Crystal Structure Of Fold Bifunctional Protein From Campylobacter Jejuni Length = 285 Back     alignment and structure
>pdb|3NGL|A Chain A, Crystal Structure Of Bifunctional 5,10-Methylenetetrahydrofolate Dehydrogenase CYCLOHYDROLASE FROM THERMOPLASMA ACIDOPHILUM Length = 276 Back     alignment and structure
>pdb|2C2X|A Chain A, Three Dimensional Structure Of Bifunctional Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase From Mycobacterium Tuberculosis Length = 281 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
3pzx_A557 Formate--tetrahydrofolate ligase; HET: TOE; 2.20A 7e-85
3pzx_A 557 Formate--tetrahydrofolate ligase; HET: TOE; 2.20A 7e-52
3do6_A543 Formate--tetrahydrofolate ligase; TM1766, putative 2e-83
3do6_A 543 Formate--tetrahydrofolate ligase; TM1766, putative 3e-46
1a4i_A301 Methylenetetrahydrofolate dehydrogenase / methenyl 5e-61
4a26_A300 Putative C-1-tetrahydrofolate synthase, cytoplasm; 2e-58
1b0a_A288 Protein (fold bifunctional protein); folate, dehyd 4e-51
4a5o_A286 Bifunctional protein fold; oxidoreductase, hydrola 5e-51
3p2o_A285 Bifunctional protein fold; structural genomics, ce 1e-50
3ngx_A276 Bifunctional protein fold; methylenetetrahydrofola 2e-50
3l07_A285 Bifunctional protein fold; structural genomics, ID 5e-50
2c2x_A281 Methylenetetrahydrofolate dehydrogenase- methenylt 3e-46
1edz_A320 5,10-methylenetetrahydrofolate dehydrogenase; nucl 8e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 2e-06
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} Length = 543 Back     alignment and structure
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} Length = 543 Back     alignment and structure
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Length = 301 Back     alignment and structure
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Length = 300 Back     alignment and structure
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Length = 288 Back     alignment and structure
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Length = 286 Back     alignment and structure
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Length = 285 Back     alignment and structure
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Length = 276 Back     alignment and structure
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Length = 285 Back     alignment and structure
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Length = 281 Back     alignment and structure
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Length = 320 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
3do6_A543 Formate--tetrahydrofolate ligase; TM1766, putative 100.0
3pzx_A557 Formate--tetrahydrofolate ligase; HET: TOE; 2.20A 100.0
4b4u_A303 Bifunctional protein fold; oxidoreductase; HET: NA 100.0
1a4i_A301 Methylenetetrahydrofolate dehydrogenase / methenyl 100.0
4a26_A300 Putative C-1-tetrahydrofolate synthase, cytoplasm; 100.0
3p2o_A285 Bifunctional protein fold; structural genomics, ce 100.0
1b0a_A288 Protein (fold bifunctional protein); folate, dehyd 100.0
4a5o_A286 Bifunctional protein fold; oxidoreductase, hydrola 100.0
3ngx_A276 Bifunctional protein fold; methylenetetrahydrofola 100.0
3l07_A285 Bifunctional protein fold; structural genomics, ID 100.0
2c2x_A281 Methylenetetrahydrofolate dehydrogenase- methenylt 100.0
1edz_A320 5,10-methylenetetrahydrofolate dehydrogenase; nucl 99.88
2rir_A300 Dipicolinate synthase, A chain; structural genomic 97.36
2d5c_A263 AROE, shikimate 5-dehydrogenase; substrate, dimer, 97.33
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 97.21
2egg_A297 AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff 97.09
1nvt_A287 Shikimate 5'-dehydrogenase; structural genomics, P 96.65
1p77_A272 Shikimate 5-dehydrogenase; NADPH, oxidoreductase; 96.65
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 96.6
3h9u_A436 Adenosylhomocysteinase; NAD CO-factor complex, str 96.33
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 96.18
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 96.05
3n58_A464 Adenosylhomocysteinase; ssgcid, hydrolase, structu 95.95
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 95.8
3gvp_A435 Adenosylhomocysteinase 3; protein CO-factor comple 95.5
3d64_A494 Adenosylhomocysteinase; structural genomics, ssgci 95.44
1v8b_A479 Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 95.15
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 94.66
3hdj_A313 Probable ornithine cyclodeaminase; APC62486, borde 94.52
3gvx_A290 Glycerate dehydrogenase related protein; NYSGXRC, 94.17
1ygy_A529 PGDH, D-3-phosphoglycerate dehydrogenase; oxidored 93.61
1gdh_A320 D-glycerate dehydrogenase; oxidoreductase(CHOH (D) 93.61
3hg7_A324 D-isomer specific 2-hydroxyacid dehydrogenase FAM 93.61
2g76_A335 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor 93.56
4g2n_A345 D-isomer specific 2-hydroxyacid dehydrogenase, Na; 93.43
2yq5_A343 D-isomer specific 2-hydroxyacid dehydrogenase; oxi 93.31
2cuk_A311 Glycerate dehydrogenase/glyoxylate reductase; stru 93.23
4e5n_A330 Thermostable phosphite dehydrogenase; D-2-hydroxya 92.89
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 92.86
3don_A277 Shikimate dehydrogenase; alpha-beta structure, ros 92.79
2ekl_A313 D-3-phosphoglycerate dehydrogenase; structural gen 92.67
3evt_A324 Phosphoglycerate dehydrogenase; structural genomic 92.67
3pp8_A315 Glyoxylate/hydroxypyruvate reductase A; structural 92.61
3gg9_A352 D-3-phosphoglycerate dehydrogenase oxidoreductase; 92.51
1qp8_A303 Formate dehydrogenase; oxidoreductase; HET: NDP; 2 92.49
1xdw_A331 NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas 92.21
1wwk_A307 Phosphoglycerate dehydrogenase; riken structural g 92.19
3jtm_A351 Formate dehydrogenase, mitochondrial; mitochondrio 92.14
2pi1_A334 D-lactate dehydrogenase; oxidoreductase, D-LDH, NA 92.06
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 91.74
1dxy_A333 D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc 91.61
1j4a_A333 D-LDH, D-lactate dehydrogenase; NAD-dependent dehy 91.6
4dgs_A340 Dehydrogenase; structural genomics, PSI-biology, N 91.56
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 91.16
2j6i_A364 Formate dehydrogenase; oxidoreductase, D-specific- 90.95
1mx3_A347 CTBP1, C-terminal binding protein 1; nuclear prote 90.65
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 90.43
3pwz_A272 Shikimate dehydrogenase 3; alpha-beta, oxidoreduct 90.43
1x7d_A350 Ornithine cyclodeaminase; binds NAD+, binds L-orni 90.4
3oet_A381 Erythronate-4-phosphate dehydrogenase; structural 90.39
3k5p_A416 D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, 90.38
4ezb_A317 Uncharacterized conserved protein; structural geno 90.04
2dbq_A334 Glyoxylate reductase; D-3-phosphoglycerate dehydro 89.92
2w2k_A348 D-mandelate dehydrogenase; 2-hydroxyacid dehydroge 89.85
3obb_A300 Probable 3-hydroxyisobutyrate dehydrogenase; struc 89.84
3qha_A296 Putative oxidoreductase; seattle structural genomi 89.68
2qrj_A394 Saccharopine dehydrogenase, NAD+, L-lysine- formin 89.61
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 89.53
4hy3_A365 Phosphoglycerate oxidoreductase; PSI-biology, stru 89.45
1sc6_A404 PGDH, D-3-phosphoglycerate dehydrogenase; alloster 89.19
2nac_A393 NAD-dependent formate dehydrogenase; oxidoreductas 89.11
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 89.08
3ba1_A333 HPPR, hydroxyphenylpyruvate reductase; two domain 88.95
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 88.81
3ond_A488 Adenosylhomocysteinase; plant protein, enzyme-subs 88.57
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 88.5
2o4c_A380 Erythronate-4-phosphate dehydrogenase; erythronate 88.43
3qsg_A312 NAD-binding phosphogluconate dehydrogenase-like P; 88.31
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 88.23
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 88.16
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 88.03
2gcg_A330 Glyoxylate reductase/hydroxypyruvate reductase; NA 87.78
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 87.43
2d0i_A333 Dehydrogenase; structural genomics, NPPSFA, nation 87.27
4gbj_A297 6-phosphogluconate dehydrogenase NAD-binding; stru 87.11
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 87.07
3fbt_A282 Chorismate mutase and shikimate 5-dehydrogenase fu 86.94
3tnl_A315 Shikimate dehydrogenase; structural genomics, cent 86.84
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 86.72
2i99_A312 MU-crystallin homolog; thyroid hormine binding pro 86.51
1omo_A322 Alanine dehydrogenase; two-domain, beta-sandwich-d 85.94
3l6d_A306 Putative oxidoreductase; structural genomics, prot 85.42
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 85.34
2pv7_A298 T-protein [includes: chorismate mutase (EC 5.4.99 85.32
3jyo_A283 Quinate/shikimate dehydrogenase; enzyme-cofactor c 85.2
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 82.63
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 81.3
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 81.0
4a7p_A446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 80.75
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 80.61
3ojo_A431 CAP5O; rossmann fold, complex with cofactor NAD an 80.44
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0 Back     alignment and structure
Probab=100.00  E-value=2.9e-165  Score=1302.63  Aligned_cols=374  Identities=37%  Similarity=0.618  Sum_probs=367.9

Q ss_pred             CCCHHHHHHHcCCCccccccccCceeEechhhhhhhhcCCCCcEEeehH------------------HHHHhhc-cccee
Q psy7978         150 PKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFL------------------KLLLLDF-GYTFA  210 (542)
Q Consensus       150 ~~~I~~ia~~lgl~~~~l~~yG~~kAKi~~~~l~~~~~~~~gklilVTa------------------~aL~~~l-~~~~~  210 (542)
                      |+||++||+++||++|||||||+|||||++++++|++++++||||||||                  |||+ |+ |++++
T Consensus         2 ~~pI~~iA~~lgi~~~~le~YG~~kAKv~~~~l~~~~~~~~GklIlVTaItPTPaGEGKtTttiGL~~aL~-~lgk~~~~   80 (543)
T 3do6_A            2 MKPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTTTSIGLSMSLN-RIGKKSIV   80 (543)
T ss_dssp             CCCHHHHHHHTTCCGGGEEEETTTEEEECTTHHHHTTTSCCCEEEEEEESSCCTTCCCHHHHHHHHHHHHH-HTTCCEEE
T ss_pred             CCCHHHHHHHcCCCHHHHHhCCCccEEecHHHhhhhhcCCCCeEEEEEecCCCCCCCCccchHHHHHHHHH-hcCCeeEE
Confidence            7899999999999999999999999999999999998889999999999                  9997 99 99999


Q ss_pred             eeecCCCCCcccccccCCCCCceeeeeCcccccccccchhhHHHhhHHHHHHHHhhHhcccCCC-C--ceEeeeecccc-
Q psy7978         211 CVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQT-D--QQLYSRLVPTI-  286 (542)
Q Consensus       211 ~lRePSlGPvFGiKGGAaGGG~sqv~Pme~iNLHfTGD~hAIt~A~NLlaA~iDn~i~~~n~l~-d--~i~w~R~~d~n-  286 (542)
                      |||||||||||||||||||||||||+|||||||||||||||||||||||||+|||||||||+|+ |  +|+|+|||||| 
T Consensus        81 ~lRePSlGP~FGiKGGAaGGGysQViPMediNLHfTGD~HAItaAnNLLaA~iDn~i~~gn~L~IDp~~I~WkRv~D~ND  160 (543)
T 3do6_A           81 TLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHAVASAHNLLAAVLDSHIKHGNELKIDITRVFWKRTMDMND  160 (543)
T ss_dssp             EECCCCHHHHHHSCCSTTEETTEEEESHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEECCCEEESSCC
T ss_pred             EEecCCCCCcCCcccccCCCcceeecchhhccccccchHHHHHHHHHHHHHHHHHHHhccCccCCCCCeEEEEecccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999 6  99999999999 


Q ss_pred             --------------------------------------------------------------------------------
Q psy7978         287 --------------------------------------------------------------------------------  286 (542)
Q Consensus       287 --------------------------------------------------------------------------------  286 (542)
                                                                                                      
T Consensus       161 R~LR~IvvGlGg~~~G~~re~gFdITvASEiMAILcLa~dl~DLk~Rlg~ivvay~~~g~PVta~DL~~~GAmt~LLkDA  240 (543)
T 3do6_A          161 RALRSIVIGLGGSANGFPREDSFIITAASEVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDA  240 (543)
T ss_dssp             GGGSSEEESCSSGGGCCCEEECEEEGGGSHHHHHHHHCSSHHHHHHHHHTCEEEEETTSCEEEHHHHTCHHHHHHHTTTT
T ss_pred             ceeeeeEECCCCCCCCCccccceeEEehhhhhhHHHhcCCHHHHHHHhcCEEEEEcCCCCeEehHhcccchhHHHHHHhh
Confidence                                                                                            


Q ss_pred             -----------------------------------------------------------cccccCCCCCCCCEEEEEeee
Q psy7978         287 -----------------------------------------------------------LNIKCRTSGKIPDAVVLVTTV  307 (542)
Q Consensus       287 -----------------------------------------------------------~dIKCR~sGl~PdavVlVATv  307 (542)
                                                                                 ||||||.+||+||||||||||
T Consensus       241 ikPNLvQTlEgtPa~VHgGPFANIAHGcnSviAtk~ALklaDyvVTEAGFGADlGaEKF~dIKCR~~gl~P~avVlVATv  320 (543)
T 3do6_A          241 INPNLVQTTEGTPALIHCGPFANIAHGTNSIIATKMAMKLSEYTVTEAGFGADLGAEKFIDFVSRVGGFYPNAAVLVATV  320 (543)
T ss_dssp             TSCEEEEETTSCEEEECCCCCSSSSCCBCCHHHHHHHHHHCSEEEEEBSSSTTTHHHHHHHTHHHHHTCCCSEEEEEECH
T ss_pred             cCccceeeccCCeeEEecCccccccccchHHHHHHHHHhccCeEEEecccccccchHhhcCccccccCCCCCEEEEEeeh
Confidence                                                                       999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCCCCCCcccCccCHHHHhccCCcccccCcccc-----CCCCCcE-EEeCCCCCCHHHHHHHHHHHHH
Q psy7978         308 RALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQ-----YLEHPPV-TMLIYYTYTPAEWEIIRKAAKQ  381 (542)
Q Consensus       308 RALK~HGG~~~~~~g~p~~~~l~~en~~al~~G~~~~~~~NL~~H-----~fGvpvV-AiN~F~tDT~~Ei~~i~~~~~~  381 (542)
                      ||||||||+++        ++|.+||+++|++|     |+||.||     +||+||| |||+|++||++||++|+++|++
T Consensus       321 RALK~hGG~~~--------~~l~~enl~al~~G-----~~NL~kHIen~~~fGvpvVVaiN~F~tDT~aEi~~v~~~~~~  387 (543)
T 3do6_A          321 RALKYHGGANL--------KNIHEENLEALKEG-----FKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEK  387 (543)
T ss_dssp             HHHHHHTTCCG--------GGTTSCCHHHHHHH-----HHHHHHHHHHHHHTTCCEEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             HHHHhcCCCCh--------hhcCccCHHHHHHH-----HHHHHHHHHHHHHcCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            99999999985        89999999999999     9999999     7999999 9999999999999999999999


Q ss_pred             cCCCeEEEccccccCchhHHHHHHHHHHHhccCCCCcccccCCCCCHHHHHHHHHHHHhcCCceecChHHHHHHHHHHHc
Q psy7978         382 AGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERL  461 (542)
Q Consensus       382 ~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~~~~~f~~lY~~~~~l~eKI~~IA~~IYGA~~V~~s~~A~~~l~~~e~~  461 (542)
                      +|+ ++++|+||++||+|+++||++|+++|+ ++ +|+|||++++||+|||++||++||||++|+||++|++||++||++
T Consensus       388 ~G~-~~~~s~~wa~GG~G~~~LA~~Vv~~~e-~~-~f~~lY~~~~~i~eKI~~Ia~~iYGA~~V~~s~~A~~~l~~~~~~  464 (543)
T 3do6_A          388 LGV-RVAVSEVFKKGSEGGVELAKAVAEAAK-DV-EPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKH  464 (543)
T ss_dssp             TTC-EEEEECHHHHGGGGSHHHHHHHHHHCC-CC-CCCCSSCTTSCHHHHHHHHHHHTSCCSEEEECHHHHHHHHHHHHT
T ss_pred             cCC-CEEEechhhccchhHHHHHHHHHHHhc-CC-CcccccCCCCCHHHHHHHHHHHHcCCCeEEECHHHHHHHHHHHhc
Confidence            999 599999999999999999999999998 55 899999999999999999999999999999999999999999999


Q ss_pred             CCCCCceeEEccCCCCCCCCCCCCCCCCCceEEeeEEEeecCCceEEEeecccccCCCCCCCCceeeeeeeCCCCeeeec
Q psy7978         462 GYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDIDTRTGEIEGL  541 (542)
Q Consensus       462 G~~~lPVCmAKTqySlS~dp~~~G~~P~~f~~~vrdv~~~~GAgfiv~~~g~i~tMPGLp~~Paa~~idvd~~~g~i~GL  541 (542)
                      ||++||||||||||||||||+++|+ |+||+|||||||+|+||||||++||+|||||||||+|+|++|||| ++|+|+||
T Consensus       465 G~~~lPvCmAKTqySlS~dp~~~G~-P~gf~~~irdv~~saGAGFiv~l~G~i~tMPGLp~~Paa~~idvd-~~G~i~GL  542 (543)
T 3do6_A          465 GFDELPVIVAKTPKSISHDPSLRGA-PEGYTFVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVD-DSGNIVGV  542 (543)
T ss_dssp             TCTTSCEEEECCSSSSSSCTTCCSC-CCSCEEEECEEEEETTTTEEEEECSCCCSSCCCCSSCGGGGCEEC-TTSCEESC
T ss_pred             CCCCCCEEEEccCcCcccCccccCC-CCCceEEeeEEEEcCCCcEEEEEeCcceeCCCCCCCccceeCcCC-CCCCEeeC
Confidence            9999999999999999999999999 999999999999999999999999999999999999999999999 79999999


Q ss_pred             C
Q psy7978         542 F  542 (542)
Q Consensus       542 ~  542 (542)
                      |
T Consensus       543 f  543 (543)
T 3do6_A          543 S  543 (543)
T ss_dssp             C
T ss_pred             C
Confidence            8
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* Back     alignment and structure
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Back     alignment and structure
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Back     alignment and structure
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Back     alignment and structure
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Back     alignment and structure
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Back     alignment and structure
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Back     alignment and structure
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Back     alignment and structure
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Back     alignment and structure
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Back     alignment and structure
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} Back     alignment and structure
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} Back     alignment and structure
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* Back     alignment and structure
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Back     alignment and structure
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} Back     alignment and structure
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} Back     alignment and structure
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* Back     alignment and structure
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} Back     alignment and structure
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Back     alignment and structure
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} Back     alignment and structure
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Back     alignment and structure
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Back     alignment and structure
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} Back     alignment and structure
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} Back     alignment and structure
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} Back     alignment and structure
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* Back     alignment and structure
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A Back     alignment and structure
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Back     alignment and structure
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* Back     alignment and structure
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} Back     alignment and structure
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Back     alignment and structure
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B Back     alignment and structure
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* Back     alignment and structure
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Back     alignment and structure
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} Back     alignment and structure
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* Back     alignment and structure
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Back     alignment and structure
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} Back     alignment and structure
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} Back     alignment and structure
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} Back     alignment and structure
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 542
d1eg7a_549 c.37.1.10 (A:) Formyltetrahydrofolate synthetase { 5e-70
d1eg7a_ 549 c.37.1.10 (A:) Formyltetrahydrofolate synthetase { 2e-44
d1a4ia1170 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehy 5e-30
d1b0aa1166 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehy 2e-28
d1edza1171 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehy 8e-20
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]} Length = 549 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Formyltetrahydrofolate synthetase
species: Moorella thermoacetica [TaxId: 1525]

 Score =  232 bits (593), Expect = 5e-70
 Identities = 93/255 (36%), Positives = 133/255 (52%), Gaps = 14/255 (5%)

Query: 287 LNIKCRTSGKIPDAVVLVTTVRALKMHGGGPSVVSGQPLKPEY-TENTRAVLRGEDSFLL 345
            ++KCR +G  PDA V+V TVRALKMHGG P        K +  TEN  A+  G  +   
Sbjct: 308 YDVKCRYAGFKPDATVIVATVRALKMHGGVP--------KSDLATENLEALREGFANLEK 359

Query: 346 YCKLDSQYLEHPPVTMLIYYTYTPAEWEIIRKAAKQAGAHDAVVCENWAKGGAGAADLAD 405
           + +   ++     V +  + T T AE  ++ +   +AGA       +WAKGG G  +LA 
Sbjct: 360 HIENIGKFGVPAVVAINAFPTDTEAELNLLYELCAKAGAEV---ALSWAKGGEGGLELAR 416

Query: 406 AVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVLEKLQKLERLGYGR 465
            V++  E +   F  LY++   +  KI  +A E+YG   V+      + +Q+ E LGYG 
Sbjct: 417 KVLQTLESRPSNFHVLYNLDLSIKDKIAKIATEIYGADGVNYTAEADKAIQRYESLGYGN 476

Query: 466 LTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPS 525
           L V MAKT  S S D T  G  P ++ + + +V +SAG   +V I G I  MPGL  RP+
Sbjct: 477 LPVVMAKTQYSFSDDMTKLG-RPRNFTITVREVRLSAGGRLIVPITGAIMTMPGLPKRPA 535

Query: 526 IYDIDIDTRTGEIEG 540
             +IDID   G I G
Sbjct: 536 ACNIDIDA-DGVITG 549
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]} Length = 549 Back     information, alignment and structure
>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 170 Back     information, alignment and structure
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Length = 166 Back     information, alignment and structure
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 171 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
d1eg7a_549 Formyltetrahydrofolate synthetase {Moorella thermo 100.0
d1b0aa1166 Methylenetetrahydrofolate dehydrogenase/cyclohydro 100.0
d1a4ia1170 Methylenetetrahydrofolate dehydrogenase/cyclohydro 100.0
d1edza1171 Methylenetetrahydrofolate dehydrogenase/cyclohydro 99.96
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 96.17
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 95.85
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 95.18
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 94.52
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 93.46
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 93.26
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 90.89
d1x7da_340 Ornithine cyclodeaminase {Pseudomonas putida [TaxI 89.97
d1omoa_320 Archaeal alanine dehydrogenase {Archaeon Archaeogl 88.31
d1sc6a1188 Phosphoglycerate dehydrogenase {Escherichia coli [ 88.15
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 87.8
d1j4aa1197 D-lactate dehydrogenase {Lactobacillus helveticus 87.74
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 87.44
d1ygya1184 Phosphoglycerate dehydrogenase {Mycobacterium tube 87.33
d1mx3a1193 Transcription corepressor CtbP {Human (Homo sapien 83.88
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Formyltetrahydrofolate synthetase
species: Moorella thermoacetica [TaxId: 1525]

Probab=100.00  E-value=1.4e-164  Score=1309.72  Aligned_cols=381  Identities=42%  Similarity=0.697  Sum_probs=371.8

Q ss_pred             chHHHhhcCCCCHHHHHHHcCCCccccccccCceeEechhhhhhhhcCCCCcEEeehH------------------HHHH
Q psy7978         141 DIDIARAQDPKDINQLAQEIGLHVSEVSSYGRSKAKISTEVLDRLKRVQDGKYIILFL------------------KLLL  202 (542)
Q Consensus       141 d~eia~~~~~~~I~~ia~~lgl~~~~l~~yG~~kAKi~~~~l~~~~~~~~gklilVTa------------------~aL~  202 (542)
                      ||||||+++|+||++||+++||++|||||||+|||||+++++++++++|+||||||||                  |||+
T Consensus         1 D~eIa~~~~~~~I~~ia~~~gl~~~~~~~yG~~kaKv~~~~~~~~~~~~~gklilVTaitPTp~GEGKtTttiGL~~aL~   80 (549)
T d1eg7a_           1 DIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGLTDALA   80 (549)
T ss_dssp             CCSTTCCCCCCCHHHHHHTTTCCGGGEEESSSSCEEECTHHHHHHTTSCCCEEEEEEESSCCTTCCCHHHHHHHHHHHHH
T ss_pred             ChhhHhhCCCCCHHHHHHHcCCCHHHHhhcCCcceEecHHHHHhhccCCCceEEEEEeCCCCCCCCCcceeHHhHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999999                  9996


Q ss_pred             hhc-ccceeeeecCCCCCcccccccCCCCCceeeeeCcccccccccchhhHHHhhHHHHHHHHhhHhcccCCC-C--ceE
Q psy7978         203 LDF-GYTFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAVTAANNLAAAQLDARMFHEATQT-D--QQL  278 (542)
Q Consensus       203 ~~l-~~~~~~lRePSlGPvFGiKGGAaGGG~sqv~Pme~iNLHfTGD~hAIt~A~NLlaA~iDn~i~~~n~l~-d--~i~  278 (542)
                       |+ |++++|||||||||||||||||||||||||+|||||||||||||||||||||||||+|||||||||+|+ |  +|+
T Consensus        81 -~lgk~~~~~lRePSlGP~fGiKGGAaGGG~sqv~Pme~inLhftGD~hAitaA~NLl~A~idn~i~~gn~L~iDp~~I~  159 (549)
T d1eg7a_          81 -RLGKRVMVCLREPSLGPSFGIKGGAAGGGYAQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQGNVLNIDPRTIT  159 (549)
T ss_dssp             -HTTCCEEEEECCCCSTHHHHTTCCCSEETTEEEECHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHTTCTTCBCGGGCC
T ss_pred             -HhCCceEEEEecCCCCCccccccCCCCCCeeeeecchhhhcccCCcHHHHHHHHHHHHHHHHhhhcccccCCCCCceee
Confidence             99 999999999999999999999999999999999999999999999999999999999999999999999 6  999


Q ss_pred             eeeecccc------------------------------------------------------------------------
Q psy7978         279 YSRLVPTI------------------------------------------------------------------------  286 (542)
Q Consensus       279 w~R~~d~n------------------------------------------------------------------------  286 (542)
                      ||||||||                                                                        
T Consensus       160 w~Rv~D~NDR~LR~i~vglgg~~~G~~r~~gFdIT~ASEvMAIl~La~~l~DLr~Rlg~ivv~~~~~g~pv~a~DL~~~G  239 (549)
T d1eg7a_         160 WRRVIDLNERALRNIVIGLGGKANGVPRETGFDISVASEVMACLCLASDLMDLKERFSRKVVGYTYDGKPVTAGDLEAQG  239 (549)
T ss_dssp             CCEEESSCCGGGSSEEESCSSTTSCCCEEECEEEGGGSHHHHHHHHCSSHHHHHHHHHTCEEEEBTTSCEEETGGGTCHH
T ss_pred             eceeecchhhhhhheEEeccccCCCcceecccccchhhhheeeeeecCCHHHHHHhhcCEEeeecCCCCCcchhhcccch
Confidence            99999999                                                                        


Q ss_pred             --------------------------------------------------------------------cccccCCCCCCC
Q psy7978         287 --------------------------------------------------------------------LNIKCRTSGKIP  298 (542)
Q Consensus       287 --------------------------------------------------------------------~dIKCR~sGl~P  298 (542)
                                                                                          ||||||.+|++|
T Consensus       240 Am~~LLkdAi~PNLvQT~EgtPa~vHgGPFANIAhG~nSviAt~~al~ladyvVTEAGFGaDlGaEKF~dIkcr~~gl~P  319 (549)
T d1eg7a_         240 SMALLMKDAIKPNLVQTLENTPAFIHGGPFANIAHGCNSIIATKTALKLADYVVTEAGFGADLGAEKFYDVKCRYAGFKP  319 (549)
T ss_dssp             HHHHHTTTTTSCEEEEETTCCEEEECCCCCSSSSCCBCCHHHHHHHHHHCSEEEEEBSSCTTTHHHHHHHTHHHHHTCCC
T ss_pred             hHHHHHHHHHHhhhheeccCCceeeecCCccccccccchHHHHHHHhhcCCeEEEeccccCCccchhhhccccccCCCCC
Confidence                                                                                999999999999


Q ss_pred             CEEEEEeeehhhhhcCCCCCCCCCCCCCcccCccCHHHHhccCCcccccCcccc-----CCCCCcE-EEeCCCCCCHHHH
Q psy7978         299 DAVVLVTTVRALKMHGGGPSVVSGQPLKPEYTENTRAVLRGEDSFLLYCKLDSQ-----YLEHPPV-TMLIYYTYTPAEW  372 (542)
Q Consensus       299 davVlVATvRALK~HGG~~~~~~g~p~~~~l~~en~~al~~G~~~~~~~NL~~H-----~fGvpvV-AiN~F~tDT~~Ei  372 (542)
                      ||+|||||+||||||||+++        ++|.+||+++|++|     |+||+||     +||+||| |||+|++|||+||
T Consensus       320 ~~~VlVaTvRALK~HGG~~~--------~~l~~eNl~Al~~G-----~~NL~rHIeNi~~fGlpvVVAIN~F~tDTd~Ei  386 (549)
T d1eg7a_         320 DATVIVATVRALKMHGGVPK--------SDLATENLEALREG-----FANLEKHIENIGKFGVPAVVAINAFPTDTEAEL  386 (549)
T ss_dssp             CEEEEEECHHHHHHTTTCCG--------GGTTSCCHHHHHHH-----HHHHHHHHHHHHTTTCCEEEEEECCTTCCHHHH
T ss_pred             ceEEEEeehhhhhhcCCCCh--------HHcCcccHHHHHHH-----HHHHHHHHHhhhhcCCCeEEEeccCCccchhHH
Confidence            99999999999999999985        89999999999999     9999999     8999999 9999999999999


Q ss_pred             HHHHHHHHHcCCCeEEEccccccCchhHHHHHHHHHHHhccCCCCcccccCCCCCHHHHHHHHHHHHhcCCceecChHHH
Q psy7978         373 EIIRKAAKQAGAHDAVVCENWAKGGAGAADLADAVIKATELKDKQFKYLYDIHDPLLTKIQTVAREMYGVHKVDCPQPVL  452 (542)
Q Consensus       373 ~~i~~~~~~~G~~~~~v~~~~a~GG~Ga~~LA~~Vv~a~~~~~~~f~~lY~~~~~l~eKI~~IA~~IYGA~~V~~s~~A~  452 (542)
                      ++|+++|++.|+.   +|.+|++||+|++|||++|+++|++.+++|+|||++++||+|||++||++||||++|+||++|+
T Consensus       387 ~~i~~~~~~~g~~---~a~~wa~GG~Ga~dLA~~Vv~a~e~~~~~f~~LY~~~~~l~eKIe~IA~~IYGA~~V~~S~~A~  463 (549)
T d1eg7a_         387 NLLYELCAKAGAE---VALSWAKGGEGGLELARKVLQTLESRPSNFHVLYNLDLSIKDKIAKIATEIYGADGVNYTAEAD  463 (549)
T ss_dssp             HHHHHHTTTSEEE---EECCTTTGGGGGHHHHHHHHHHHHHSCCCCCCSSCTTSCHHHHHHHHHHHTTCCSEEEECHHHH
T ss_pred             HHHHHHHhhcCcc---eeeecccCccchHHHHHHHHHHHhcccccccccCCccchHHHHHHHHHHHhcCCCceeeCHHHH
Confidence            9999999998874   5778999999999999999999976433899999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCceeEEccCCCCCCCCCCCCCCCCCceEEeeEEEeecCCceEEEeecccccCCCCCCCCceeeeeee
Q psy7978         453 EKLQKLERLGYGRLTVCMAKTALSLSGDPTIKGVVPPDYVLPIHDVYVSAGAGFVVVIAGDISKMPGLGTRPSIYDIDID  532 (542)
Q Consensus       453 ~~l~~~e~~G~~~lPVCmAKTqySlS~dp~~~G~~P~~f~~~vrdv~~~~GAgfiv~~~g~i~tMPGLp~~Paa~~idvd  532 (542)
                      +||++||++||++||||||||||||||||+++|+ |+||+|||||||+|+||||||++||+|||||||||+|||++||||
T Consensus       464 kqL~~~e~~G~~~LPVCmAKTqySfS~Dp~l~Ga-P~gf~l~VrevrlsaGAGFiV~i~G~ImTMPGLPk~PaA~~Idid  542 (549)
T d1eg7a_         464 KAIQRYESLGYGNLPVVMAKTQYSFSDDMTKLGR-PRNFTITVREVRLSAGGRLIVPITGAIMTMPGLPKRPAACNIDID  542 (549)
T ss_dssp             HHHHHHHHTTCTTSCEEEECCTTSSSSCTTCCSC-CCSCEEEECCCEEETTTEEEEECSSTTCCSCCCCSSCGGGTCEEC
T ss_pred             HHHHHHHHCCCCCCCEEEEeCCCCcCCCcccCCC-CCCCeEEeeEEEEcCCceEEEEEecccccCCCCCCCccccccccC
Confidence            9999999999999999999999999999999999 999999999999999999999999999999999999999999999


Q ss_pred             CCCCeeee
Q psy7978         533 TRTGEIEG  540 (542)
Q Consensus       533 ~~~g~i~G  540 (542)
                       ++|+|+|
T Consensus       543 -~~G~I~G  549 (549)
T d1eg7a_         543 -ADGVITG  549 (549)
T ss_dssp             -SSSEECC
T ss_pred             -CCCCeeC
Confidence             6899998
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} Back     information, alignment and structure