Psyllid ID: psy8075
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1074 | 2.2.26 [Sep-21-2011] | |||||||
| Q86T65 | 1068 | Disheveled-associated act | yes | N/A | 0.963 | 0.969 | 0.465 | 0.0 | |
| Q80U19 | 1115 | Disheveled-associated act | yes | N/A | 0.967 | 0.931 | 0.446 | 0.0 | |
| Q8BPM0 | 1077 | Disheveled-associated act | no | N/A | 0.474 | 0.473 | 0.547 | 1e-164 | |
| Q9Y4D1 | 1078 | Disheveled-associated act | no | N/A | 0.474 | 0.473 | 0.545 | 1e-164 | |
| Q6ZPF4 | 1028 | Formin-like protein 3 OS= | no | N/A | 0.366 | 0.383 | 0.307 | 4e-45 | |
| Q9SK28 | 1111 | Formin-like protein 18 OS | yes | N/A | 0.354 | 0.342 | 0.307 | 7e-45 | |
| Q7G6K7 | 1234 | Formin-like protein 3 OS= | yes | N/A | 0.386 | 0.336 | 0.288 | 5e-44 | |
| Q9FLQ7 | 1649 | Formin-like protein 20 OS | no | N/A | 0.373 | 0.243 | 0.302 | 8e-44 | |
| Q8IVF7 | 1028 | Formin-like protein 3 OS= | no | N/A | 0.366 | 0.383 | 0.300 | 9e-44 | |
| Q9VUC6 | 1183 | Formin-like protein CG321 | no | N/A | 0.433 | 0.393 | 0.267 | 9e-43 |
| >sp|Q86T65|DAAM2_HUMAN Disheveled-associated activator of morphogenesis 2 OS=Homo sapiens GN=DAAM2 PE=2 SV=3 | Back alignment and function desciption |
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Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/1084 (46%), Positives = 713/1084 (65%), Gaps = 49/1084 (4%)
Query: 8 GWCGCLQDDEPPEITYCMVDNAGTPALVTFTPTLPIPPTNELNTMFEELVEELDLTAPNK 67
G+ C + PEI + DN + F+ PIP ELN F ELV+ELDLT N+
Sbjct: 12 GFLCCFGGSDIPEIN--LRDNHPL-QFMEFSS--PIPNAEELNIRFAELVDELDLTDKNR 66
Query: 68 AAMLSLPDEKKWQIYCSRKMDQTSTTD-APDNPEQYIEQLRNFKS-SPLTEHDDTEIKSR 125
AM +LP EKKWQIYCS+K +Q A P+ YI+++ + + L D+ E + R
Sbjct: 67 EAMFALPPEKKWQIYCSKKKEQEDPNKLATSWPDYYIDRINSMAAMQSLYAFDEEETEMR 126
Query: 126 TRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCIKALMN 185
++++ L+TALRTQP FV RFIE EGL LL +L+++DH + ++ +H+S+IGCIKALMN
Sbjct: 127 NQVVEDLKTALRTQPMRFVTRFIELEGLTCLLNFLRSMDHATCESRIHTSLIGCIKALMN 186
Query: 186 NSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMSHYQRF 245
NS GR+HVL P AI IAQSL TEN KTK+AVLEILGAVCL+PGGHKKVL AM HYQ +
Sbjct: 187 NSQGRAHVLAQPEAISTIAQSLRTENSKTKVAVLEILGAVCLVPGGHKKVLQAMLHYQVY 246
Query: 246 CNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLRYEVIM 305
ER+RFQ ++N+LD+S G YR +V++KTA+MSF+NAVL+ G G+ +LEFRLHLRYE +M
Sbjct: 247 AAERTRFQTLLNELDRSLGRYRDEVNLKTAIMSFINAVLNAGAGEDNLEFRLHLRYEFLM 306
Query: 306 LGIQPIIDKLRTHENETLDRHLDFFEMLRHEDESELARKYETDHIETKSATSMFNILRRK 365
LGIQP+IDKLR HEN LD+HLDFFEM+R+ED+ ELAR+++ HI+TKSA+ MF ++ +K
Sbjct: 307 LGIQPVIDKLRQHENAILDKHLDFFEMVRNEDDLELARRFDMVHIDTKSASQMFELIHKK 366
Query: 366 LGHTAAYPHFLSLLHHCILLPLE-FGCHPQHWLLLDRLAQQLTLQTETGEDYDHILLK-I 423
L +T AYP LS+LHHC+ +P + G + Q W LLDR+ QQ+ LQ E G D D L+
Sbjct: 367 LKYTEAYPCLLSVLHHCLQMPYKRNGGYFQQWQLLDRILQQIVLQDERGVDPDLAPLENF 426
Query: 424 NVKKVVHLLAKEEEIVAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRI 483
NVK +V++L E E+ + +A++ E+++L +RL +KE+E + KT EKE++ +L+++
Sbjct: 427 NVKNIVNMLINENEVKQWRDQAEKFRKEHMELVSRLERKERECETKTLEKEEMMRTLNKM 486
Query: 484 KDRLEKETAGHLEAKQKVAELEDRISELKHRADFEQDERKRLENLINSGSVPDDTKAVGL 543
KD+L +E+ +A+ +VAEL ++SEL L +S + D
Sbjct: 487 KDKLARESQELRQARGQVAELVAQLSELSTGPVSSPPPPGGPLTLSSSMTTNDLPPPPPP 546
Query: 544 SRSGGREEPSSPRKPEAPSSCIPPPPPP--ASLPPPPPPRRSSDLPYLTCPRPLVRCRQP 601
P P P P PP LP P P SSD+P
Sbjct: 547 LPFACCPPPPPPPLPPGGPPTPPGAPPCLGMGLPLPQDPYPSSDVPL------------- 593
Query: 602 PRSKLKSRIPRPYFPNVSV--------QVNGTIWTELDESKLYASMELEVVDKLFCAYQK 653
K R+P+P P S +V GT+W E+D+ +++ ++LE +K+F AYQ+
Sbjct: 594 ----RKKRVPQPSHPLKSFNWVKLNEERVPGTVWNEIDDMQVFRILDLEDFEKMFSAYQR 649
Query: 654 NGVPADGSVEDLTKLGKISKSKILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSAD 713
+ GS ED+ + K K LSVIDGRRAQNC ILLSKLK+++EEI +AIL MD +
Sbjct: 650 HQKEL-GSTEDIYLASR--KVKELSVIDGRRAQNCIILLSKLKLSNEEIRQAILKMDEQE 706
Query: 714 QLPLDMLEQLLKFTPNTEEAALLEEHS--TETLARADRFLYEISKIPHYEQRLRCLHYKK 771
L DMLEQLLKF P + LLEEH E +ARADRFLYE+S+I HY+QRL+ L +KK
Sbjct: 707 DLAKDMLEQLLKFIPEKSDIDLLEEHKHEIERMARADRFLYEMSRIDHYQQRLQALFFKK 766
Query: 772 RFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKGARGNASGFRLTSLN 831
+F +++ +PK+++++ ASRE+ RS+RLR++LE++LA+GN+MNKG RG A GFR+ SLN
Sbjct: 767 KFQERLAEAKPKVEAILLASRELVRSKRLRQMLEVILAIGNFMNKGQRGGAYGFRVASLN 826
Query: 832 KLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRN 891
K+ DTKSS R ++LLHYL+ + EK F ++L + +L H+ EA+KV++ ELE ++ LR
Sbjct: 827 KIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELQHLPEAAKVNLAELEKEVGNLRR 886
Query: 892 NLKEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFG 951
L+ V E+E+QR Q P D+F+PVM +F+T ++ SE+ED + + +F +A+ FG
Sbjct: 887 GLRAVEVELEYQRRQVREPSDKFVPVMSDFITVSSFSFSELEDQLNEARDKFAKALMHFG 946
Query: 952 EDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRARQDAEMKKRTTDRKQGA 1011
E +S +QP++FF IFDTFL +EA+ D E M+RR+EEEE+RAR +A +K++ +
Sbjct: 947 EHDSKMQPDEFFGIFDTFLQAFSEARQDLEAMRRRKEEEERRARMEAMLKEQRERERWQR 1006
Query: 1012 KENGVVISNGSV---KGEFDDLISALRTGDVFGEDSIAKIKRSRRSRHSPSSAREDTRER 1068
+ V++ GS GEFDDL+SALR+G+VF +D + K+KRSR + S S A E TRER
Sbjct: 1007 QRK--VLAAGSSLEEGGEFDDLVSALRSGEVFDKD-LCKLKRSR--KRSGSQALEVTRER 1061
Query: 1069 VIGK 1072
I +
Sbjct: 1062 AINR 1065
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Homo sapiens (taxid: 9606) |
| >sp|Q80U19|DAAM2_MOUSE Disheveled-associated activator of morphogenesis 2 OS=Mus musculus GN=Daam2 PE=2 SV=4 | Back alignment and function description |
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| >sp|Q8BPM0|DAAM1_MOUSE Disheveled-associated activator of morphogenesis 1 OS=Mus musculus GN=Daam1 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q9Y4D1|DAAM1_HUMAN Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6ZPF4|FMNL3_MOUSE Formin-like protein 3 OS=Mus musculus GN=Fmnl3 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9SK28|FH18_ARATH Formin-like protein 18 OS=Arabidopsis thaliana GN=FH18 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9FLQ7|FH20_ARATH Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q8IVF7|FMNL3_HUMAN Formin-like protein 3 OS=Homo sapiens GN=FMNL3 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9VUC6|Y2138_DROME Formin-like protein CG32138 OS=Drosophila melanogaster GN=CG32138 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1074 | ||||||
| 328708571 | 1097 | PREDICTED: disheveled-associated activat | 0.964 | 0.944 | 0.627 | 0.0 | |
| 328708567 | 1107 | PREDICTED: disheveled-associated activat | 0.964 | 0.935 | 0.627 | 0.0 | |
| 328708569 | 1108 | PREDICTED: disheveled-associated activat | 0.964 | 0.935 | 0.627 | 0.0 | |
| 270005074 | 1127 | hypothetical protein TcasGA2_TC007082 [T | 0.990 | 0.944 | 0.620 | 0.0 | |
| 189236799 | 1132 | PREDICTED: similar to disheveled associa | 0.990 | 0.939 | 0.616 | 0.0 | |
| 310703615 | 1090 | disheveled associated activator of morph | 0.979 | 0.965 | 0.590 | 0.0 | |
| 307172198 | 1131 | Disheveled-associated activator of morph | 0.964 | 0.916 | 0.578 | 0.0 | |
| 340718756 | 1086 | PREDICTED: disheveled-associated activat | 0.978 | 0.967 | 0.592 | 0.0 | |
| 383848889 | 1133 | PREDICTED: disheveled-associated activat | 0.977 | 0.926 | 0.594 | 0.0 | |
| 380012411 | 1121 | PREDICTED: LOW QUALITY PROTEIN: dishevel | 0.978 | 0.937 | 0.592 | 0.0 |
| >gi|328708571|ref|XP_003243732.1| PREDICTED: disheveled-associated activator of morphogenesis 2-like isoform 3 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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Score = 1340 bits (3468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/1105 (62%), Positives = 851/1105 (77%), Gaps = 69/1105 (6%)
Query: 4 RGKKGWCGCLQDDEPPEITYCMVDNAGTPALVTFTPTLPIPPTNELNTMFEELVEELDLT 63
RG+KGWCGCL+DDEPPEITY +VD +GT L TPTLP+P EL+ +F ELVEELDLT
Sbjct: 18 RGRKGWCGCLKDDEPPEITYIVVD-SGTLTLQKMTPTLPMPEKPELDRLFAELVEELDLT 76
Query: 64 APNKAAMLSLPDEKKWQIYCSRKM---DQTSTTDAPDNPEQYIEQLRNFKSSPLTEHDDT 120
A NKAAML L +EKKWQIYCS+K DQ +TTD +PE YIE++++ D+
Sbjct: 77 ATNKAAMLELHEEKKWQIYCSKKKILEDQENTTDLSQSPENYIERIQSLIG------DEQ 130
Query: 121 EIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSGQTSLHSSIIGCI 180
E T++ DSL+TALRTQPHSFVLRF++ +GL+TLL L ++++ + Q ++H+SIIGCI
Sbjct: 131 E---NTKLFDSLKTALRTQPHSFVLRFVQADGLVTLLGVLSSMNYDTQQGAMHTSIIGCI 187
Query: 181 KALMNNSTGRSHVLGYPGAIDIIAQSLSTENIKTKIAVLEILGAVCLIPGGHKKVLDAMS 240
KALMNNSTGRSHVL +P AI IA+SL TEN +TK+AVLEILGA CL+PGGHKKVLDAM+
Sbjct: 188 KALMNNSTGRSHVLAHPSAISTIARSLLTENPRTKVAVLEILGASCLVPGGHKKVLDAMT 247
Query: 241 HYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKTALMSFLNAVLSYGPGQHSLEFRLHLR 300
Y+ F +ER+RFQGI+NDLD++TGIYR D+++KTA+MSF+NAVLSYGPGQ SLEFRLHLR
Sbjct: 248 DYKEFAHERARFQGIINDLDRNTGIYRDDLTVKTAIMSFVNAVLSYGPGQESLEFRLHLR 307
Query: 301 YEVIMLGIQPIIDKLRTHENETLDRHLDFFEMLRHEDESELARKYETDHIETKSATSMFN 360
YE + LG++ II+KLR HEN+TLDRH+DFF+M+R+EDE+ELARK+E + ++T+SATSMF
Sbjct: 308 YEFLQLGLKNIINKLREHENQTLDRHMDFFDMVRNEDENELARKFEQEQVDTQSATSMFE 367
Query: 361 ILRRKLGHTAAYPHFLSLLHHCILLPLEFGCHPQHWLLLDRLAQQLTLQTETGEDYDHIL 420
+LRRKL H+ AYPHFLSL H +LLPLE+G PQHWLL DR+ QQ+TLQT+ G D D
Sbjct: 368 LLRRKLSHSPAYPHFLSLFQHFLLLPLEYGSLPQHWLLFDRIVQQITLQTDVGADNDVSP 427
Query: 421 LKINVKKVVHLLAKEEEIVAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESL 480
+ INVK ++ LLAKEEE+VAAK KA+ELE EN +S LAKKEQELD + QEKED++ S+
Sbjct: 428 ININVKDIIQLLAKEEELVAAKNKAEELEKENTSISASLAKKEQELDLRNQEKEDMEASI 487
Query: 481 SRIKDRLEKETAGHLEAKQKVAELEDRISELKHRADFEQDERKRLENLINSGSVPDDTKA 540
SRIK+RLEKE + HLE KQK++ELED SEL+HR +EQ ER++LE ++ +GS+PDD K
Sbjct: 488 SRIKERLEKEISIHLETKQKISELEDTSSELQHRIAYEQAERRKLEAMLTNGSLPDDAK- 546
Query: 541 VGLSRSGGREEPSSPRKPEAPSSC-----------IPP---PPPPASLPPPPPPRRSSDL 586
V S + P P SC IP PPPP LP +RS ++
Sbjct: 547 VNFS-APPMSIPPPPPPQPMTKSCGPAPPPAPPLQIPQLNLPPPPGCLPQLVGRQRSVEI 605
Query: 587 PYLTCPRPLVRCRQPPRSKLKSRIPRPYFPNVSVQVNGTIWTELDESKLYASMELEVVDK 646
P + P + P +K V GT+W ++DE K+Y+S++LE VDK
Sbjct: 606 PKPSAPLKSFNWAKLPETK----------------VAGTVWADIDEGKMYSSIDLEAVDK 649
Query: 647 LFCAYQK----NGVPA---DGSVEDLTKLGKISKSKILSVIDGRRAQNCTILLSKLKMTD 699
LFCAYQ NG +GS EDL + GK +KSK+LSVIDGRRAQNCTILLSKLKM+D
Sbjct: 650 LFCAYQNQKPTNGTTTAINEGSSEDLRQTGK-NKSKVLSVIDGRRAQNCTILLSKLKMSD 708
Query: 700 EEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHS--TETLARADRFLYEISKI 757
EEI++ I+ MD+ D LPLDM+EQLLKFTP +EAALLEEHS ++LARADRFLYEISKI
Sbjct: 709 EEIARVIMDMDTKDVLPLDMVEQLLKFTPGPDEAALLEEHSFDLDSLARADRFLYEISKI 768
Query: 758 PHYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKG 817
HY+QRLR L YKK+F W ++E + K VMEASREV RSRRLRKLLE+VLALGNYMNKG
Sbjct: 769 AHYDQRLRSLVYKKKFITWTGEVEGRTKIVMEASREVARSRRLRKLLEIVLALGNYMNKG 828
Query: 818 ARGNASGFRLTSLNKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKV 877
ARGNA GFRL+SLN+L DTKSSS RG+TLLHY+V++A+K+FK++L LEEDL HV+ ASKV
Sbjct: 829 ARGNAWGFRLSSLNRLTDTKSSSVRGITLLHYIVDMADKKFKDILLLEEDLPHVRGASKV 888
Query: 878 SMKELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCRLSEIEDLFQ 937
S+ ELE DM+QLRNNLKEV REIEFQRVQP VPGD FLPVMKEFLT+ATC+ SE+EDLFQ
Sbjct: 889 SLAELEKDMSQLRNNLKEVEREIEFQRVQPAVPGDMFLPVMKEFLTTATCKFSELEDLFQ 948
Query: 938 DMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRARQD 997
DMKTRFDRAVRLFGEDNS+IQP+DFF IFD+FLT L EA+ DN ++K+RREEEEKR RQ+
Sbjct: 949 DMKTRFDRAVRLFGEDNSTIQPDDFFAIFDSFLTALYEARQDNSSVKKRREEEEKRLRQE 1008
Query: 998 AEMKKRTTDRKQGAKENGVVISNGSV------------KGEFDDLISALRTGDVFGEDSI 1045
E+KK T DRK K++ V+SNGS K EFDDLISALRTGDVFGEDS+
Sbjct: 1009 VELKKLTLDRK-NCKDSASVLSNGSGGRQVSINGTSGDKAEFDDLISALRTGDVFGEDSM 1067
Query: 1046 AKIKRSRRSRHSPSSAREDTRERVI 1070
AKIKRSR+SRHSP ARE +R+RV+
Sbjct: 1068 AKIKRSRKSRHSP-PAREHSRDRVL 1091
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Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328708567|ref|XP_003243731.1| PREDICTED: disheveled-associated activator of morphogenesis 2-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|328708569|ref|XP_001947056.2| PREDICTED: disheveled-associated activator of morphogenesis 2-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|270005074|gb|EFA01522.1| hypothetical protein TcasGA2_TC007082 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|189236799|ref|XP_970309.2| PREDICTED: similar to disheveled associated activator of morphogenesis [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|310703615|ref|NP_001122407.2| disheveled associated activator of morphogenesis [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|307172198|gb|EFN63723.1| Disheveled-associated activator of morphogenesis 1 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|340718756|ref|XP_003397829.1| PREDICTED: disheveled-associated activator of morphogenesis 2-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|383848889|ref|XP_003700080.1| PREDICTED: disheveled-associated activator of morphogenesis 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|380012411|ref|XP_003690277.1| PREDICTED: LOW QUALITY PROTEIN: disheveled-associated activator of morphogenesis 2-like [Apis florea] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1074 | ||||||
| FB|FBgn0025641 | 1455 | DAAM "Dishevelled Associated A | 0.415 | 0.306 | 0.565 | 8.5e-262 | |
| UNIPROTKB|E2R292 | 1068 | DAAM1 "Uncharacterized protein | 0.472 | 0.475 | 0.510 | 1.5e-232 | |
| UNIPROTKB|A2VDK3 | 1068 | DAAM1 "Dishevelled associated | 0.472 | 0.475 | 0.510 | 6.6e-232 | |
| RGD|1305119 | 968 | Daam1 "dishevelled associated | 0.469 | 0.520 | 0.512 | 4.7e-231 | |
| ZFIN|ZDB-GENE-030911-6 | 1060 | daam1a "dishevelled associated | 0.474 | 0.481 | 0.498 | 3.3e-230 | |
| UNIPROTKB|Q9Y4D1 | 1078 | DAAM1 "Disheveled-associated a | 0.472 | 0.471 | 0.510 | 8.6e-230 | |
| UNIPROTKB|D4A9U5 | 1078 | Daam1 "Protein Daam1" [Rattus | 0.472 | 0.471 | 0.512 | 1.4e-229 | |
| MGI|MGI:1914596 | 1077 | Daam1 "dishevelled associated | 0.472 | 0.471 | 0.512 | 2.3e-229 | |
| UNIPROTKB|F1NH09 | 1053 | F1NH09 "Uncharacterized protei | 0.466 | 0.475 | 0.503 | 6.9e-228 | |
| ZFIN|ZDB-GENE-030131-4212 | 1079 | daam1b "dishevelled associated | 0.467 | 0.465 | 0.500 | 5e-225 |
| FB|FBgn0025641 DAAM "Dishevelled Associated Activator of Morphogenesis" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1225 (436.3 bits), Expect = 8.5e-262, Sum P(3) = 8.5e-262
Identities = 265/469 (56%), Positives = 327/469 (69%)
Query: 601 PPRSKL-KSRIPRPYFP----NVS----VQVNGTIWTELDESKLYASMELEVVDKLFCAY 651
PP+ L K +P+P P N S ++ GT+W+ELDESKLY +MELE +DKLF AY
Sbjct: 935 PPKVDLPKKNVPQPTNPLKSFNWSKLPDAKLQGTVWSELDESKLYNNMELESIDKLFSAY 994
Query: 652 QKNGVPA-DGSVEDXXXXXXXXXXXXXXXXDGRRAQNCTILLSKLKMTDEEISKAILSMD 710
QKNGV A DGS ED DGRRAQNCTILLSKLKM+D EISKAILSMD
Sbjct: 995 QKNGVSATDGSYEDLRVTGKAAKQKVLSVIDGRRAQNCTILLSKLKMSDMEISKAILSMD 1054
Query: 711 SADQLPLDMLEQLLKFTPNTEEAALLEEHST--ETLARADRFLYEISKIPHYEQRLRCLH 768
S +QL LDM+EQLLKFTP+ EE ALL+EHS E+LARADRFLYEISKIPHYEQRL+ LH
Sbjct: 1055 SNEQLQLDMVEQLLKFTPSAEERALLDEHSEDIESLARADRFLYEISKIPHYEQRLKSLH 1114
Query: 769 YKKRFHFWISDIEPKIKSVMEASREVTXXXXXXXXXXXXXXXGNYMNKGARGNASGFRLT 828
YKKRF I+D+ P+I SVMEASREV GNYMN+GARGNASGFRL
Sbjct: 1115 YKKRFMLTINDLVPRITSVMEASREVARSRRLRKLLELVLALGNYMNRGARGNASGFRLA 1174
Query: 829 SLNKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQ 888
SLN+L DTKSS+++G TLLHYLV++ E++FK++LKLE+D+ HV+EASKVS+ E++ D+
Sbjct: 1175 SLNRLADTKSSAAKGTTLLHYLVQVIERKFKDLLKLEDDIPHVREASKVSLGEMDKDIQM 1234
Query: 889 LRNNLKEVSREIEFQRVQ-PLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAV 947
LR L +V+REIEF R P GDRFLPVM+EF A+ R +E+ED FQDMKTRFDRAV
Sbjct: 1235 LRTGLADVAREIEFHRSSGPAQQGDRFLPVMREFHAQASVRFAELEDKFQDMKTRFDRAV 1294
Query: 948 RLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMXXXXXXXXXXARQDAEMKKRTTDR 1007
RLFGED S +QP++FF IFD+FL EA+ DNE+ A+Q+AE+KKRT +R
Sbjct: 1295 RLFGEDGSVLQPDEFFGIFDSFLAAFAEARHDNESFRRRQEEEEKRAKQEAELKKRTIER 1354
Query: 1008 KQ--GAKEN---GVVISNGSVKGEFDDLISALRTGDVFGE--DSIAKIK 1049
K G + + + +GS G+ D S + GD GE D I+ ++
Sbjct: 1355 KNKTGLMTSVARNLGLKSGSSNGDPD---SPAKGGDNKGEFDDLISALR 1400
|
|
| UNIPROTKB|E2R292 DAAM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A2VDK3 DAAM1 "Dishevelled associated activator of morphogenesis 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1305119 Daam1 "dishevelled associated activator of morphogenesis 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030911-6 daam1a "dishevelled associated activator of morphogenesis 1a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9Y4D1 DAAM1 "Disheveled-associated activator of morphogenesis 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D4A9U5 Daam1 "Protein Daam1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1914596 Daam1 "dishevelled associated activator of morphogenesis 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NH09 F1NH09 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-4212 daam1b "dishevelled associated activator of morphogenesis 1b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q86T65 | DAAM2_HUMAN | No assigned EC number | 0.4658 | 0.9636 | 0.9691 | yes | N/A |
| Q80U19 | DAAM2_MOUSE | No assigned EC number | 0.4463 | 0.9674 | 0.9318 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1074 | |||
| pfam02181 | 372 | pfam02181, FH2, Formin Homology 2 Domain | 1e-108 | |
| smart00498 | 392 | smart00498, FH2, Formin Homology 2 Domain | 2e-88 | |
| pfam06367 | 197 | pfam06367, Drf_FH3, Diaphanous FH3 Domain | 1e-53 | |
| pfam06371 | 187 | pfam06371, Drf_GBD, Diaphanous GTPase-binding Doma | 2e-46 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-06 | |
| pfam05308 | 248 | pfam05308, Mito_fiss_reg, Mitochondrial fission re | 2e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-05 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 8e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-05 | |
| PRK13729 | 475 | PRK13729, PRK13729, conjugal transfer pilus assemb | 1e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-04 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 2e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-04 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 3e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 8e-04 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 9e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| COG1579 | 239 | COG1579, COG1579, Zn-ribbon protein, possibly nucl | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.002 | |
| pfam02841 | 297 | pfam02841, GBP_C, Guanylate-binding protein, C-ter | 0.002 | |
| pfam04156 | 186 | pfam04156, IncA, IncA protein | 0.002 | |
| PRK12705 | 508 | PRK12705, PRK12705, hypothetical protein; Provisio | 0.002 | |
| PHA01732 | 94 | PHA01732, PHA01732, proline-rich protein | 0.003 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 0.003 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.004 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.004 |
| >gnl|CDD|216919 pfam02181, FH2, Formin Homology 2 Domain | Back alignment and domain information |
|---|
Score = 342 bits (880), Expect = e-108
Identities = 151/381 (39%), Positives = 220/381 (57%), Gaps = 21/381 (5%)
Query: 601 PPRSKLK----SRIPRPYFPNVSVQVNGTIWTELDESKLYASMELEVVDKLFCAYQKNGV 656
P+ KLK ++ Q GT+W ELDE ++L +++LF A K
Sbjct: 6 KPKKKLKPLHWDKVNPA-------QDRGTVWDELDEESFEKDLDLSELEELFSAKAKKKK 58
Query: 657 PADGSVEDLTKLGKISKSKILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSADQLP 716
S + K K K +SV+D +R+QN ILL KLK+ EEI +AIL MD L
Sbjct: 59 ----SKKSEKKSSSKKKKKEISVLDPKRSQNIAILLRKLKLPPEEIVQAILEMD-ESVLG 113
Query: 717 LDMLEQLLKFTPNTEEAALLEEHSTE--TLARADRFLYEISKIPHYEQRLRCLHYKKRFH 774
L++LE LLK P EE L+E+ + L RA++FL E+SKIP E+RL L +K F
Sbjct: 114 LELLENLLKMAPTKEELKKLKEYKGDPSKLGRAEQFLLELSKIPRLEERLEALLFKSTFE 173
Query: 775 FWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKG-ARGNASGFRLTSLNKL 833
+ +++P ++++ AS E+ SR+ +KLLEL+LALGNYMN G RGNA GF+L+SL KL
Sbjct: 174 EEVEELKPSLETLEAASEELRESRKFKKLLELILALGNYMNSGTRRGNAKGFKLSSLLKL 233
Query: 834 VDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNL 893
DTKS+ ++ TLLHYLV++ ++ ++L +L HV++A+KV +++LE D+ +L L
Sbjct: 234 SDTKSTDNK-TTLLHYLVKIIREKLPDLLDFSSELSHVEKAAKVDLEQLEKDVKELEKGL 292
Query: 894 KEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGED 953
K++ RE+E P D+F+ MKEFL A +L ++E L ++ F FGED
Sbjct: 293 KKLERELELSA-LDEHPDDKFVEKMKEFLEEAEEKLDKLESLLKEAMELFKELTEYFGED 351
Query: 954 NSSIQPEDFFVIFDTFLTTLN 974
PE+FF I FL
Sbjct: 352 PKETSPEEFFKILRDFLRMFK 372
|
Length = 372 |
| >gnl|CDD|214697 smart00498, FH2, Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >gnl|CDD|219000 pfam06367, Drf_FH3, Diaphanous FH3 Domain | Back alignment and domain information |
|---|
| >gnl|CDD|219001 pfam06371, Drf_GBD, Diaphanous GTPase-binding Domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|218549 pfam05308, Mito_fiss_reg, Mitochondrial fission regulator | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|184281 PRK13729, PRK13729, conjugal transfer pilus assembly protein TraB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|202427 pfam02841, GBP_C, Guanylate-binding protein, C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|217933 pfam04156, IncA, IncA protein | Back alignment and domain information |
|---|
| >gnl|CDD|237178 PRK12705, PRK12705, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222828 PHA01732, PHA01732, proline-rich protein | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1074 | |||
| KOG1924|consensus | 1102 | 100.0 | ||
| KOG1923|consensus | 830 | 100.0 | ||
| smart00498 | 432 | FH2 Formin Homology 2 Domain. FH proteins control | 100.0 | |
| PF02181 | 370 | FH2: Formin Homology 2 Domain; InterPro: IPR015425 | 100.0 | |
| KOG1925|consensus | 817 | 100.0 | ||
| KOG1922|consensus | 833 | 100.0 | ||
| PF06371 | 187 | Drf_GBD: Diaphanous GTPase-binding Domain; InterPr | 100.0 | |
| PF06367 | 197 | Drf_FH3: Diaphanous FH3 Domain; InterPro: IPR01047 | 100.0 | |
| KOG1924|consensus | 1102 | 99.72 | ||
| KOG1923|consensus | 830 | 97.64 | ||
| PRK15319 | 2039 | AIDA autotransporter-like protein ShdA; Provisiona | 96.93 | |
| PF06345 | 15 | Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR0 | 96.83 | |
| PF11841 | 160 | DUF3361: Domain of unknown function (DUF3361) | 96.8 | |
| KOG3671|consensus | 569 | 96.3 | ||
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 95.28 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 95.07 | |
| KOG1922|consensus | 833 | 95.03 | ||
| COG5178 | 2365 | PRP8 U5 snRNP spliceosome subunit [RNA processing | 94.57 | |
| PRK13729 | 475 | conjugal transfer pilus assembly protein TraB; Pro | 94.31 | |
| KOG4672|consensus | 487 | 94.3 | ||
| KOG4672|consensus | 487 | 93.25 | ||
| KOG2999|consensus | 713 | 93.16 | ||
| KOG1830|consensus | 518 | 92.84 | ||
| KOG4368|consensus | 757 | 92.65 | ||
| KOG4199|consensus | 461 | 91.74 | ||
| PF03276 | 582 | Gag_spuma: Spumavirus gag protein; InterPro: IPR00 | 91.66 | |
| PF05308 | 253 | Mito_fiss_reg: Mitochondrial fission regulator; In | 91.28 | |
| KOG1925|consensus | 817 | 90.43 | ||
| KOG4849|consensus | 498 | 90.19 | ||
| KOG2129|consensus | 552 | 89.84 | ||
| KOG4849|consensus | 498 | 89.69 | ||
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 89.63 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 89.13 | |
| KOG0212|consensus | 675 | 87.79 | ||
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 87.47 | |
| PF05308 | 253 | Mito_fiss_reg: Mitochondrial fission regulator; In | 86.38 | |
| PF06637 | 442 | PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 Th | 85.71 | |
| KOG2675|consensus | 480 | 85.59 | ||
| PF05518 | 759 | Totivirus_coat: Totivirus coat protein; InterPro: | 85.48 | |
| PRK13729 | 475 | conjugal transfer pilus assembly protein TraB; Pro | 85.12 | |
| KOG0132|consensus | 894 | 84.7 | ||
| PRK14950 | 585 | DNA polymerase III subunits gamma and tau; Provisi | 84.39 | |
| PRK14950 | 585 | DNA polymerase III subunits gamma and tau; Provisi | 84.19 | |
| cd00256 | 429 | VATPase_H VATPase_H, regulatory vacuolar ATP synth | 82.56 | |
| PF09849 | 247 | DUF2076: Uncharacterized protein conserved in bact | 82.04 | |
| KOG4590|consensus | 409 | 80.93 | ||
| KOG0977|consensus | 546 | 80.06 |
| >KOG1924|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-168 Score=1425.58 Aligned_cols=938 Identities=28% Similarity=0.452 Sum_probs=757.5
Q ss_pred ChhhHHHHHHHHHHhcCCChhHHHhhcCCChHHHHHHHHhhcc----cccCCCCCCCChHHHHHHHhcccCCCCCCCChh
Q psy8075 45 PTNELNTMFEELVEELDLTAPNKAAMLSLPDEKKWQIYCSRKM----DQTSTTDAPDNPEQYIEQLRNFKSSPLTEHDDT 120 (1074)
Q Consensus 45 ~~~ei~~~F~~ll~~~nl~~~~~~~m~~~~~ekKw~li~~~~~----~~~~~~~~~~~P~~yi~~L~~~~~~~~~~~~~~ 120 (1074)
+++++...|+.|+++|||++++|++|++.+...|..||.+.-+ ...+.++++.++.+||++|++..
T Consensus 84 s~~e~~~~F~~~~~dmni~eekr~pll~K~~~ek~kmis~~l~~k~~~~~s~ne~~~~s~eyV~~l~~gl---------- 153 (1102)
T KOG1924|consen 84 SSNEVLELFELMGEDMNINEEKRKPLLDKDLPEKRKMISQYLQMKMMIRKSDNEAKGSSPEYVVELRSGL---------- 153 (1102)
T ss_pred cHHHHHHHHHHHhhhccccHhhhhhhhhcCchHHHHHHHHHHHHHHHHhhhhhhhccCChHHHHHHHccc----------
Confidence 5789999999999999999999999999888887766643321 11122345678899999998764
Q ss_pred hhhhHHHHHHHHhhhhccCchhhHHHhhhcCcHHHHHHHHHhcccccC----CcchhHHHHHHHHHHhcChhhHHHhhcC
Q psy8075 121 EIKSRTRILDSLRTALRTQPHSFVLRFIECEGLLTLLEYLKNLDHYSG----QTSLHSSIIGCIKALMNNSTGRSHVLGY 196 (1074)
Q Consensus 121 ~~~~~~~~l~~L~v~Lrt~~~~Wv~~Fi~~~Gl~~L~~~L~~~~~~~~----~~~~~~~~l~ClkalmN~~~G~~~vl~~ 196 (1074)
+.....+||.+|||+|.+||||||.+|. ..|+..|+++|.++..... +..+++++|+||||+|||++|+..|+..
T Consensus 154 ~t~~l~~CleslRVsL~~npVSwvn~Fg-vegl~ll~~~Lkrl~dsk~~~~~~~k~~~eiIrClka~mNn~~Gl~~vL~~ 232 (1102)
T KOG1924|consen 154 STKKLLECLESLRVSLTSNPVSWVNKFG-VEGLGLLLDVLKRLRDSKVGSKLDIKNLQEIIRCLKAFMNNKFGLVLVLRR 232 (1102)
T ss_pred ccccHHHHHHHHhhhhcCCccHHHHHhh-hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccccceeeeecC
Confidence 2346789999999999999999999999 7999999999999754332 3456899999999999999999999999
Q ss_pred ccHHHHHHHhhcCCChhhHHHHHHHHHHHhccC--CchhHHHHHHhhHHHHcccccchHHHHHHhhhccCCccchhHHHH
Q psy8075 197 PGAIDIIAQSLSTENIKTKIAVLEILGAVCLIP--GGHKKVLDAMSHYQRFCNERSRFQGIVNDLDKSTGIYRTDVSIKT 274 (1074)
Q Consensus 197 ~~~i~~la~sL~s~~~~tr~~v~elLaavc~~~--~Gh~~VL~Al~~~~~~~~e~~RF~~lv~~l~~~~~~~~~~~~~~~ 274 (1074)
...+..+|++||...+.+++.|+.+|+|+|+|. +|.++||+||+...+. ....||++||++|+.. +...+.+
T Consensus 233 e~~lllla~aldpr~pnmm~dvvkllsalciV~ee~~~ekvl~aiT~~ae~-~~veRF~piv~gl~~~-----e~~~l~v 306 (1102)
T KOG1924|consen 233 ERSLLLLARALDPREPNMMTDVVKLLSALCIVGEENGLEKVLEAITTIAEA-KPVERFRPIVEGLDFL-----EKQQLQV 306 (1102)
T ss_pred CccHHHHHHhcCccCccHHHHHHHHHHHHheeehhhHHHHHHHHHHHHHhh-cchhhhhhHHHHHhcc-----chHHHHH
Confidence 999999999999999999999999999999995 6999999999998754 7789999999999764 4688999
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHhccCchHHHHHHHHHHHhHHhhHHHHHhhhcCCccCCCC
Q psy8075 275 ALMSFLNAVLSYGPGQHSLEFRLHLRYEVIMLGIQPIIDKLRTHENETLDRHLDFFEMLRHEDESELARKYETDHIETKS 354 (1074)
Q Consensus 275 a~m~lIN~lv~~~~~~~dl~~R~~lR~Ef~~~GL~~~l~~Lr~~~~~~L~~qi~~fe~~~~eDe~el~~~~~~~~~d~~~ 354 (1074)
+||+|||+++++ +.||+||+|||+||+++||+++|++|+..+|+.|+.|+++|++++++|.+||.+|++++..++++
T Consensus 307 acmq~INal~t~---p~dldfRlhlR~E~mr~gL~~~l~~l~~i~n~~ldvqlkvfdE~~e~Dl~el~~rledir~emDd 383 (1102)
T KOG1924|consen 307 ACMQFINALVTS---PSDLDFRLHLRSEFMRDGLHKYLPDLTEINNDILDVQLKVFDEHKEDDLEELSGRLEDIRAEMDD 383 (1102)
T ss_pred HHHHHHHHhcCC---HHHhhHHHHHHHHHHHHhHHHHHHHhhhhccHHHHHHHHHHhhhhhhhHHHHHhHHHhhhhhhcc
Confidence 999999999997 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChhhHHHHHHHhccCCccCCCchhHHHHHHHHHHHHhhhcccCCCccchh---hhhhHHHHHHH
Q psy8075 355 ATSMFNILRRKLGHTAAYPHFLSLLHHCILLPLEFGCHPQHWLLLDRLAQQLTLQTETGEDYDHIL---LKINVKKVVHL 431 (1074)
Q Consensus 355 ~~~v~~~l~~~~~~t~a~~~~lSiLQhLLli~~~~~~~~~~~~lld~~v~qivl~~~~g~d~d~~~---l~~~v~~li~~ 431 (1074)
.++||+.|++.+++|.+++||||||||||+|++|+..+++||+||++||+||||| ++|.||||.+ |++++..+||.
T Consensus 384 ~~~~f~lL~n~vkdT~aE~yfLSILQhlllirnDy~~rpqYykLIEecISqIvlH-r~~~DPdf~yr~~l~id~~~liD~ 462 (1102)
T KOG1924|consen 384 ANEVFELLANTVKDTGAEPYFLSILQHLLLIRNDYYIRPQYYKLIEECISQIVLH-RTGMDPDFKYRFRLDIDLTELIDK 462 (1102)
T ss_pred HHHHHHHHHHhhhhccccchHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHh-cCCCCCCcchhhcccCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 8999999976 66999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Q psy8075 432 LAKEEEIVAAKKKADELEMENVDLSNRLAKKEQELDQKTQEKEDLDESLSRIKDRLEKETAGHLEAKQKVAELEDRISEL 511 (1074)
Q Consensus 432 l~~~~e~~~~~~~~eel~~e~~eL~~kl~~~e~el~~k~~e~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~l 511 (1074)
+++++.+++.++++.+++++.... +.+...+..++. ...+.+..++.....+
T Consensus 463 ~vdkak~eeseqkA~e~~kk~~ke----------~ta~qe~qael~------------------k~e~Ki~~l~ae~~al 514 (1102)
T KOG1924|consen 463 MVDKAKAEESEQKAAELEKKFDKE----------LTARQEAQAELQ------------------KHEEKIKLLEAEKQAL 514 (1102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----------HhHHHHHHHHHH------------------HhhhhcccCchhhhhc
Confidence 999888777777776666654332 111111111111 1112233344433344
Q ss_pred hhccchhhhhhhhhcccCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCC---CCCCCCCCCCCCCC
Q psy8075 512 KHRADFEQDERKRLENLINSGSVPDDTKAVGLSRSGGREEPSSPRKPEAPSSCIPP--PPPPA---SLPPPPPPRRSSDL 586 (1074)
Q Consensus 512 ~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~ppppppppp~~~~ppp--pp~pg---~pPPPPpppp~~~~ 586 (1074)
.+... ..|..++.||||+.+ + +|++++ +|||||||.|++++||| ||.|| +||||||||++|||
T Consensus 515 ~s~~~---------~~~~~~~iP~PP~~p-p-~gG~g~-pppPppPPlpggag~PPPPpplPg~aG~PPpPppppg~~gp 582 (1102)
T KOG1924|consen 515 SSPSQ---------LLPIDGGIPPPPPLP-P-TGGTGP-PPPPPPPPLPGGAGPPPPPPPLPGIAGGPPPPPPPPGGGGP 582 (1102)
T ss_pred cCccc---------CCCCCCCCCCCCCCC-C-CCCCCC-CCCCCCCCCCCCCCCCccCCCCCcccCCCCccCCCCCCCCC
Confidence 33221 111111211111110 0 111111 11111111121111111 11111 12222222222222
Q ss_pred CCCCCCCCC-------------CCCCC-CCCCCCCCCCCCCCCCCcc---------cCcCCCcccccCccchhccCCHHH
Q psy8075 587 PYLTCPRPL-------------VRCRQ-PPRSKLKSRIPRPYFPNVS---------VQVNGTIWTELDESKLYASMELEV 643 (1074)
Q Consensus 587 pppp~~~~~-------------~~~p~-~~~~~~~k~~~~p~~~lk~---------~~i~~TiW~~~~~~~~~~~ld~~~ 643 (1074)
||||||++. +.+|. +.++ +.|++|+|.++|+. .-.+++||.++++.++.+.--|..
T Consensus 583 pPPPpp~g~~Gg~ppPP~~gm~pmaPvlP~gL-kpKK~~k~e~~Mrr~nW~kI~p~d~s~~cFWvkv~Edk~en~dlfak 661 (1102)
T KOG1924|consen 583 PPPPPPGGFLGGPPPPPPPGMFPMAPVLPFGL-KPKKVYKPEVPMRRFNWSKIVPRDLSENCFWVKVNEDKLENDDLFAK 661 (1102)
T ss_pred CCcCCCCCCCCCCCCCCCCCcccccccCCCCC-CccccCCCCCccccCCccccCccccCccceeeecchhhccchHHHHH
Confidence 222221111 11111 1123 55778999999987 345799999999999876666899
Q ss_pred HHHHhhhhccCCCCCCCCccccccccccccCccccccchhhhhhHHHHhccCCCCHHHHHHHHHcCCCCCCCCHHHHHHH
Q psy8075 644 VDKLFCAYQKNGVPADGSVEDLTKLGKISKSKILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQL 723 (1074)
Q Consensus 644 lE~lF~~~~~~~~~~~~~~~~~~~~~k~kk~k~isvLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~~L~~e~l~~L 723 (1074)
+.-.||++.+...... .+++.++.. +||++++.|||+|.|||++|+|++|+||+++|+.+|+++|+. .|++.+|++|
T Consensus 662 L~~~Fatq~k~~k~~e-~~eekkt~~-kKk~kel~ilDsKtaQnLsIflgS~rmpyeeik~~ILevne~-vLse~~iqnL 738 (1102)
T KOG1924|consen 662 LALKFATQPKVKKEQE-GGEEKKTGT-KKKVKELRILDSKTAQNLSIFLGSFRMPYEEIKNVILEVNED-VLSESMIQNL 738 (1102)
T ss_pred HHHHhhcccccccccc-ccccccchh-hhhhhhheecchHHHHHHHHHHhhccCCHHHHHHHHhhccHH-HHHHHHHHHH
Confidence 9999998765443222 223322222 378889999999999999999999999999999999999995 9999999999
Q ss_pred HhcCCCHHHHHHHhhccC--CCCChHHHHHHHHhCCCchHHHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHH
Q psy8075 724 LKFTPNTEEAALLEEHST--ETLARADRFLYEISKIPHYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLR 801 (1074)
Q Consensus 724 lk~lPt~eE~~~l~~~~~--~~L~~aeqF~~~l~~ip~~~~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~ 801 (1074)
++++|..|.+..|.+++. +.|.+.|||...|+.|+++..||.+++||.+|.+.+++|+|.|.+|++||++|++|++|.
T Consensus 739 ik~lPe~E~l~~L~e~Kaeye~l~e~EQF~vvm~~vkrL~pRL~~ilFKl~fse~vnniKP~i~avt~ACEE~rkSesFs 818 (1102)
T KOG1924|consen 739 IKHLPEQEQLNKLSELKAEYEDLPEPEQFVVVMSQVKRLRPRLSAILFKLTFSEQVNNIKPDIVAVTAACEELRKSESFS 818 (1102)
T ss_pred HHhCCCHHHHHHHHHHHHhccCCCCHHHHhHHHhhccccChhHHHHHHHhhHHHHHhhcChHHHHHHHHHHHHHhhhhHH
Confidence 999999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCC-CCccceeccccccccccccCCCCCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHH
Q psy8075 802 KLLELVLALGNYMNKGAR-GNASGFRLTSLNKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMK 880 (1074)
Q Consensus 802 ~lL~~IL~iGNymN~g~r-g~A~GFkL~sL~KL~dtKs~~d~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~ 880 (1074)
++|++||++|||||+|+| .+||||.|++|+||.||||+ |+++||||||+++|+++||++++|++||.||++|+|||.+
T Consensus 819 ~lLeLvLl~GNyMn~gSrNa~afgF~is~L~kL~dTKsa-Dqk~TLLHfLae~~e~kypd~l~F~ddl~hv~kaSrvnad 897 (1102)
T KOG1924|consen 819 KLLELVLLVGNYMNSGSRNAQAFGFNISFLCKLRDTKSA-DQKTTLLHFLAEICEEKYPDILKFPDDLEHVEKASRVNAD 897 (1102)
T ss_pred HHHHHHHHHhcccccccccchhhccchHHHHhhcccccc-chhhHHHHHHHHHHHHhChhhhcchhhHHHHHhhccccHH
Confidence 999999999999999965 79999999999999999996 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChh
Q psy8075 881 ELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPE 960 (1074)
Q Consensus 881 ~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~ 960 (1074)
.|.+.+.++...++.++..+..... .....|+|.++|..|.+.|..++..|..++.+|++.|+++.+||..|+++++.+
T Consensus 898 ~ikK~~~~m~~~ik~Le~dlk~~~~-~~~e~dkF~ekM~~F~e~a~eq~~~ls~M~~~M~~lye~L~eYyaFd~kkysmE 976 (1102)
T KOG1924|consen 898 EIKKNLQQMENQIKKLERDLKNFKI-AGNEHDKFVEKMTSFHEKAREQYSKLSSMHGNMEKLYESLGEYYAFDPKKYSME 976 (1102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-CCcchhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHeecCcccCcHH
Confidence 9999999999999999999876543 346789999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc--CCCCcccHHHHHHHHhcCC
Q psy8075 961 DFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRARQDAEMKKRTTDRKQGAKENGVVIS--NGSVKGEFDDLISALRTGD 1038 (1074)
Q Consensus 961 eFF~~~~~F~~~f~~a~~en~~~~~~~e~eekr~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~D~Ll~~Lr~G~ 1038 (1074)
|||+.+.+|.+.|..|..||++. ++++|.++|++.+.++++++..++++ +..+.++. .++++||||+||+||+||+
T Consensus 977 EFFaDi~tFrnaf~ea~~en~kr-Ree~Ek~rr~k~a~eqseqEr~erQq-rk~alIdm~a~~de~GVmDslLeaLqsga 1054 (1102)
T KOG1924|consen 977 EFFADIRTFRNAFLEAVAENEKR-REEEEKERRAKLAKEQSEQERLERQQ-RKKALIDMNAEGDETGVMDSLLEALQSGA 1054 (1102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhh-hhHHHhccccccchhhhHHHHHHHHHhhc
Confidence 99999999999999999988753 23344467777777776554445543 34444443 4899999999999999999
Q ss_pred CCCchhhhhhhhcc
Q psy8075 1039 VFGEDSIAKIKRSR 1052 (1074)
Q Consensus 1039 ~f~~~~~~~~~~~~ 1052 (1074)
+|+.+ =++..|++
T Consensus 1055 afr~r-rk~~prq~ 1067 (1102)
T KOG1924|consen 1055 AFRTR-RKRLPRQT 1067 (1102)
T ss_pred cccCc-ccccCCCC
Confidence 99977 23344433
|
|
| >KOG1923|consensus | Back alignment and domain information |
|---|
| >smart00498 FH2 Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >PF02181 FH2: Formin Homology 2 Domain; InterPro: IPR015425 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis [] | Back alignment and domain information |
|---|
| >KOG1925|consensus | Back alignment and domain information |
|---|
| >KOG1922|consensus | Back alignment and domain information |
|---|
| >PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division [] | Back alignment and domain information |
|---|
| >PF06367 Drf_FH3: Diaphanous FH3 Domain; InterPro: IPR010472 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis [] | Back alignment and domain information |
|---|
| >KOG1924|consensus | Back alignment and domain information |
|---|
| >KOG1923|consensus | Back alignment and domain information |
|---|
| >PRK15319 AIDA autotransporter-like protein ShdA; Provisional | Back alignment and domain information |
|---|
| >PF06345 Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR010465 This domain is found in Diaphanous-related formins (Drfs) | Back alignment and domain information |
|---|
| >PF11841 DUF3361: Domain of unknown function (DUF3361) | Back alignment and domain information |
|---|
| >KOG3671|consensus | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >KOG1922|consensus | Back alignment and domain information |
|---|
| >COG5178 PRP8 U5 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK13729 conjugal transfer pilus assembly protein TraB; Provisional | Back alignment and domain information |
|---|
| >KOG4672|consensus | Back alignment and domain information |
|---|
| >KOG4672|consensus | Back alignment and domain information |
|---|
| >KOG2999|consensus | Back alignment and domain information |
|---|
| >KOG1830|consensus | Back alignment and domain information |
|---|
| >KOG4368|consensus | Back alignment and domain information |
|---|
| >KOG4199|consensus | Back alignment and domain information |
|---|
| >PF03276 Gag_spuma: Spumavirus gag protein; InterPro: IPR004957 The Spumavirus gag protein is a core viral polyprotein that undergoes specific enzymatic cleavages in vivo to yield the mature protein | Back alignment and domain information |
|---|
| >PF05308 Mito_fiss_reg: Mitochondrial fission regulator; InterPro: IPR007972 This family consists of several uncharacterised eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1925|consensus | Back alignment and domain information |
|---|
| >KOG4849|consensus | Back alignment and domain information |
|---|
| >KOG2129|consensus | Back alignment and domain information |
|---|
| >KOG4849|consensus | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
| >KOG0212|consensus | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF05308 Mito_fiss_reg: Mitochondrial fission regulator; InterPro: IPR007972 This family consists of several uncharacterised eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals | Back alignment and domain information |
|---|
| >KOG2675|consensus | Back alignment and domain information |
|---|
| >PF05518 Totivirus_coat: Totivirus coat protein; InterPro: IPR008871 This family of proteins contain the coat proteins of the Totiviruses | Back alignment and domain information |
|---|
| >PRK13729 conjugal transfer pilus assembly protein TraB; Provisional | Back alignment and domain information |
|---|
| >KOG0132|consensus | Back alignment and domain information |
|---|
| >PRK14950 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14950 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments | Back alignment and domain information |
|---|
| >PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins | Back alignment and domain information |
|---|
| >KOG4590|consensus | Back alignment and domain information |
|---|
| >KOG0977|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1074 | ||||
| 2j1d_G | 483 | Crystallization Of Hdaam1 C-Terminal Fragment Lengt | 3e-97 | ||
| 2z6e_A | 419 | Crystal Structure Of Human Daam1 Fh2 Length = 419 | 7e-90 | ||
| 4eah_A | 402 | Crystal Structure Of The Formin Homology 2 Domain O | 4e-35 | ||
| 3o4x_E | 467 | Crystal Structure Of Complex Between Amino And Carb | 1e-31 | ||
| 3obv_E | 457 | Autoinhibited Formin Mdia1 Structure Length = 457 | 2e-31 | ||
| 1v9d_A | 340 | Crystal Structure Of The Core Fh2 Domain Of Mouse M | 2e-29 | ||
| 2bnx_A | 386 | Crystal Structure Of The Dimeric Regulatory Domain | 1e-19 | ||
| 1z2c_B | 383 | Crystal Structure Of Mdia1 Gbd-Fh3 In Complex With | 2e-19 | ||
| 3eg5_B | 383 | Crystal Structure Of Mdia1-Tsh Gbd-Fh3 In Complex W | 2e-19 | ||
| 3o4x_A | 330 | Crystal Structure Of Complex Between Amino And Carb | 3e-19 | ||
| 3obv_A | 327 | Autoinhibited Formin Mdia1 Structure Length = 327 | 3e-19 | ||
| 2bap_B | 317 | Crystal Structure Of The N-Terminal Mdia1 Armadillo | 4e-19 | ||
| 2f31_A | 233 | Crystal Structure Of The Autoinhibitory Switch In F | 7e-17 | ||
| 1y64_B | 443 | Bni1p Formin Homology 2 Domain Complexed With Atp-a | 7e-05 | ||
| 1ux5_A | 411 | Crystal Structures Of A Formin Homology-2 Domain Re | 7e-05 | ||
| 1ux4_A | 410 | Crystal Structures Of A Formin Homology-2 Domain Re | 8e-05 |
| >pdb|2J1D|G Chain G, Crystallization Of Hdaam1 C-Terminal Fragment Length = 483 | Back alignment and structure |
|
| >pdb|2Z6E|A Chain A, Crystal Structure Of Human Daam1 Fh2 Length = 419 | Back alignment and structure |
| >pdb|4EAH|A Chain A, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3 Bound To Actin Length = 402 | Back alignment and structure |
| >pdb|3O4X|E Chain E, Crystal Structure Of Complex Between Amino And Carboxy Terminal Fragments Of Mdia1 Length = 467 | Back alignment and structure |
| >pdb|3OBV|E Chain E, Autoinhibited Formin Mdia1 Structure Length = 457 | Back alignment and structure |
| >pdb|1V9D|A Chain A, Crystal Structure Of The Core Fh2 Domain Of Mouse Mdia1 Length = 340 | Back alignment and structure |
| >pdb|2BNX|A Chain A, Crystal Structure Of The Dimeric Regulatory Domain Of Mouse Diaphaneous-Related Formin (Drf), Mdia1 Length = 386 | Back alignment and structure |
| >pdb|1Z2C|B Chain B, Crystal Structure Of Mdia1 Gbd-Fh3 In Complex With Rhoc- Gmppnp Length = 383 | Back alignment and structure |
| >pdb|3EG5|B Chain B, Crystal Structure Of Mdia1-Tsh Gbd-Fh3 In Complex With Cdc42-Gmppnp Length = 383 | Back alignment and structure |
| >pdb|3O4X|A Chain A, Crystal Structure Of Complex Between Amino And Carboxy Terminal Fragments Of Mdia1 Length = 330 | Back alignment and structure |
| >pdb|3OBV|A Chain A, Autoinhibited Formin Mdia1 Structure Length = 327 | Back alignment and structure |
| >pdb|2BAP|B Chain B, Crystal Structure Of The N-Terminal Mdia1 Armadillo Repeat Region And Dimerisation Domain In Complex With The Mdia1 Autoregulatory Domain (Dad) Length = 317 | Back alignment and structure |
| >pdb|2F31|A Chain A, Crystal Structure Of The Autoinhibitory Switch In Formin Mdia1; The DidDAD COMPLEX Length = 233 | Back alignment and structure |
| >pdb|1Y64|B Chain B, Bni1p Formin Homology 2 Domain Complexed With Atp-actin Length = 443 | Back alignment and structure |
| >pdb|1UX5|A Chain A, Crystal Structures Of A Formin Homology-2 Domain Reveal A Flexibly Tethered Dimer Architecture Length = 411 | Back alignment and structure |
| >pdb|1UX4|A Chain A, Crystal Structures Of A Formin Homology-2 Domain Reveal A Tethered-Dimer Architecture Length = 410 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A Length = 483 | Back alignment and structure |
|---|
Score = 424 bits (1092), Expect = e-138
Identities = 216/484 (44%), Positives = 330/484 (68%), Gaps = 27/484 (5%)
Query: 602 PRSKLK----SRIPRPYFPNVSVQVNGTIWTELDESKLYASMELEVVDKLFCAYQKNGVP 657
P + LK S++P ++ GT+WTE+D++K++ ++LE +++ F AYQ+
Sbjct: 11 PTNALKSFNWSKLPEN-------KLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDF 63
Query: 658 ADGSVEDLTKLGKIS-------KSKILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMD 710
S + I K K LSVIDGRRAQNC ILLS+LK++++EI +AIL+MD
Sbjct: 64 FVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMD 123
Query: 711 SADQLPLDMLEQLLKFTPNTEEAALLEEHS--TETLARADRFLYEISKIPHYEQRLRCLH 768
+ LP DMLEQLLKF P + LLEEH + +A+ADRFL+E+S+I HY+QRL+ L+
Sbjct: 124 EQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLY 183
Query: 769 YKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKGARGNASGFRLT 828
+KK+F +++++PK++++ S EV RS L++LLE+VLA GNYMNKG RGNA GF+++
Sbjct: 184 FKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKIS 243
Query: 829 SLNKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQ 888
SLNK+ DTKSS + +TLLHYL+ + E ++ VL L E+L + +A+KV+M EL+ +++
Sbjct: 244 SLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEIST 303
Query: 889 LRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVR 948
LR+ LK V E+E+Q+ QP PGD+F+ V+ +F+T A+ S++EDL + K F +AV+
Sbjct: 304 LRSGLKAVETELEYQKSQPPQPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVK 363
Query: 949 LFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRARQDAEMKKRTTDRK 1008
FGE+ IQP++FF IFD FL ++EAK +NENM++++EEEE+RAR +A++K++ +
Sbjct: 364 HFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLKEQRERER 423
Query: 1009 QGAKENGVVISNGSVKGEFDDLISALRTGDVFGEDSIAKIKRSRRSRHSPSSAREDTRER 1068
+ K N GEFDDL+SALR+G+VF +D +K+KR+R+ + + + +RER
Sbjct: 424 KMRKAK----ENSEESGEFDDLVSALRSGEVFDKDL-SKLKRNRKRITNQMT--DSSRER 476
Query: 1069 VIGK 1072
I K
Sbjct: 477 PITK 480
|
| >3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D Length = 457 | Back alignment and structure |
|---|
| >1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1 Length = 340 | Back alignment and structure |
|---|
| >1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A Length = 411 | Back alignment and structure |
|---|
| >3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} PDB: 1z2c_B* Length = 383 | Back alignment and structure |
|---|
| >2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B Length = 386 | Back alignment and structure |
|---|
| >2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus} Length = 233 | Back alignment and structure |
|---|
| >3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Length = 339 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1074 | |||
| 2j1d_G | 483 | DAAM1, disheveled-associated activator of morphoge | 100.0 | |
| 3obv_E | 457 | Protein diaphanous homolog 1; autoinhibition, acti | 100.0 | |
| 3eg5_B | 383 | Protein diaphanous homolog 1; protein-protein comp | 100.0 | |
| 4eah_A | 402 | Formin-like protein 3, actin, alpha skeletal muscl | 100.0 | |
| 1v9d_A | 340 | Diaphanous protein homolog 1; helix bundle, protei | 100.0 | |
| 1ux5_A | 411 | BNI1 protein; structural protein, FH2 actin cytosk | 100.0 | |
| 2bnx_A | 386 | Diaphanous protein homolog 1; autoinhibition, acti | 100.0 | |
| 2f31_A | 233 | Diaphanous protein homolog 1; formin,MDIA1, protei | 100.0 | |
| 4dvg_B | 353 | Diaphanous protein; cytoskeleton, armadillo repeat | 99.67 | |
| 3dad_A | 339 | FH1/FH2 domain-containing protein 1; formin, FHOD1 | 99.62 | |
| 2z73_A | 448 | Rhodopsin; visual pigment, GQ-type, G-protein coup | 97.03 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 94.89 | |
| 3grl_A | 651 | General vesicular transport factor P115; vesicle t | 94.12 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 93.29 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 93.14 | |
| 3iot_A | 449 | Maltose-binding protein, huntingtin fusion protei; | 92.9 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 92.7 | |
| 3iot_A | 449 | Maltose-binding protein, huntingtin fusion protei; | 91.91 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 91.75 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 91.51 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 91.3 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 90.52 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 89.86 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 87.73 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 86.64 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 83.76 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 82.16 | |
| 3cve_A | 72 | Homer protein homolog 1; coiled coil, alternative | 80.48 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 80.31 |
| >2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-90 Score=817.49 Aligned_cols=452 Identities=46% Similarity=0.812 Sum_probs=357.8
Q ss_pred CCCCCcccCcCCCcccccCccchhccCCHHHHHHHhhhhccCCCC------C-C--CCccccccccccccCccccccchh
Q psy8075 613 PYFPNVSVQVNGTIWTELDESKLYASMELEVVDKLFCAYQKNGVP------A-D--GSVEDLTKLGKISKSKILSVIDGR 683 (1074)
Q Consensus 613 p~~~lk~~~i~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~------~-~--~~~~~~~~~~k~kk~k~isvLD~k 683 (1074)
.|.++..+++.+|||+++++.+++..+|+++||++|++++..... + + ++..+...+ .+|+++++|||+|
T Consensus 19 ~W~ki~~~~~~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~~~~~~~~~k~~~s~~~~~~~--~kk~~~v~lLD~k 96 (483)
T 2j1d_G 19 NWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSS--KLKVKELSVIDGR 96 (483)
T ss_dssp CCCCCCGGGCSSSGGGGCCGGGHHHHSCHHHHHHHTBSBC-------------------------------CCBCCSCHH
T ss_pred CceECCcccccCCccCcCCchhhccccCHHHHHHHHhhhcccccccccccccccccccccccccc--ccCCCcceeCCHH
Confidence 355665678899999999999888889999999999987654320 0 0 111111111 2577889999999
Q ss_pred hhhhHHHHhccCCCCHHHHHHHHHcCCCCCCCCHHHHHHHHhcCCCHHHHHHHhhccC--CCCChHHHHHHHHhCCCchH
Q psy8075 684 RAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHST--ETLARADRFLYEISKIPHYE 761 (1074)
Q Consensus 684 raqNi~I~L~~lk~~~~ei~~aI~~~D~~~~L~~e~l~~Llk~lPt~eE~~~l~~~~~--~~L~~aeqF~~~l~~ip~~~ 761 (1074)
|||||+|+|++|++|+++|++||++||+...|+.|.|+.|++++||+||++.|++|.+ +.|++||||+++|+.||+|.
T Consensus 97 RaqNi~I~L~~lk~~~~ei~~aIl~~D~~~~L~~e~l~~Ll~~~Pt~eE~~~l~~~~~d~~~L~~aEqFl~~l~~ip~~~ 176 (483)
T 2j1d_G 97 RAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQ 176 (483)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHTTSTTCCCCHHHHHHHHHSCCCHHHHHHHHTTTTCGGGBCHHHHHHHHHHTSTTHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHccCccccCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHHHHHHhCCccHH
Confidence 9999999999999999999999999998238999999999999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCCCCCCccceeccccccccccccCCC
Q psy8075 762 QRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKGARGNASGFRLTSLNKLVDTKSSSS 841 (1074)
Q Consensus 762 ~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g~rg~A~GFkL~sL~KL~dtKs~~d 841 (1074)
+||+||+|+.+|++.+.++.+.|.+|..||++|++|.+|+.||++||++|||||+|.||+|+||+|+||.||.||||+.|
T Consensus 177 ~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g~rg~A~GFkL~sL~KL~d~Ks~~d 256 (483)
T 2j1d_G 177 QRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSID 256 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCSSSCCCSCCCGGGGGGGGGSBCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccCCCCCceeeehHHHHhhhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999658
Q ss_pred CCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCchhhHHHH
Q psy8075 842 RGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPLVPGDRFLPVMKEF 921 (1074)
Q Consensus 842 ~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~~~~D~f~~~m~~F 921 (1074)
+++|||||||++|+++||++++|.+||.+|..|++|++++|.+++.+|.++++.++++++.....+.+++|.|..+|.+|
T Consensus 257 ~k~TLLhylv~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~~~d~f~~~m~~F 336 (483)
T 2j1d_G 257 KNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPGDKFVSVVSQF 336 (483)
T ss_dssp TTCBHHHHHHHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHH
T ss_pred CCccHHHHHHHHHHHhCchhhchHHHHhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987665556889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 922 LTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKRRREEEEKRARQDAEMK 1001 (1074)
Q Consensus 922 ~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~~~~~~~e~eekr~~~e~~~~ 1001 (1074)
+..|..++..|+..+.++.+.|.+++.|||||++++++++||++|.+|+..|++|++||+++++++|+|+||++++++++
T Consensus 337 l~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~~f~~A~~en~~~~~~~e~eekr~~~e~~~~ 416 (483)
T 2j1d_G 337 ITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLK 416 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhccccccccccCCCCcccHHHHHHHHhcCCCCCchhhhhhhhcccCCCCCCCCCccccccccccC
Q psy8075 1002 KRTTDRKQGAKENGVVISNGSVKGEFDDLISALRTGDVFGEDSIAKIKRSRRSRHSPSSAREDTRERVIGKN 1073 (1074)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~~~~~~~g~~D~Ll~~Lr~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1074)
++++++++.++.. ..++++|+||+||++||+|++|+++ ++|+||||||. ++++.+.+|||+++|.
T Consensus 417 ~~~~~~r~~~~~~----~~~~~~g~~D~Ll~~Lr~g~~f~~~-~~~~~r~~~~~--~~~~~~~~~~~~~~~~ 481 (483)
T 2j1d_G 417 EQRERERKMRKAK----ENSEESGEFDDLVSALRSGEVFDKD-LSKLKRNRKRI--TNQMTDSSRERPITKL 481 (483)
T ss_dssp HHHHHHHHHHHC------------------------------------------------------------
T ss_pred HHHHHHHHhccCC----CCCcccccHHHHHHHHhCCCccccc-hhhhhccccCC--CCCCCCcccccccccc
Confidence 6666655433321 2357889999999999999999999 99999999988 8888999999999874
|
| >3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D | Back alignment and structure |
|---|
| >3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B* | Back alignment and structure |
|---|
| >4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus} | Back alignment and structure |
|---|
| >1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1 | Back alignment and structure |
|---|
| >1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A | Back alignment and structure |
|---|
| >2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B | Back alignment and structure |
|---|
| >2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus} | Back alignment and structure |
|---|
| >4dvg_B Diaphanous protein; cytoskeleton, armadillo repeat, GTPase-binding domain, nucle binding, signaling protein, lipoprotein; HET: GSP; 2.60A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
| >3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
| >3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1074 | ||||
| d1v9da_ | 332 | a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 | 2e-86 | |
| d1ux5a_ | 411 | a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces | 2e-81 | |
| d2bnxa1 | 343 | a.118.1.23 (A:133-475) Diaphanous protein homolog | 2e-80 |
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 332 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Diaphanous protein homolog 1, dia1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 279 bits (716), Expect = 2e-86
Identities = 106/336 (31%), Positives = 175/336 (52%), Gaps = 9/336 (2%)
Query: 675 KILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAA 734
K L V+D + AQN +I L +M +EI IL ++ L M++ L+K P E+
Sbjct: 2 KELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNE-AVLTESMIQNLIKQMPEPEQLK 60
Query: 735 LLEEH--STETLARADRFLYEISKIPHYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASR 792
+L E + LA +++F + +P RL + +K +F + +I+P+I SV A
Sbjct: 61 MLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACE 120
Query: 793 EVTRSRRLRKLLELVLALGNYMNKG-ARGNASGFRLTSLNKLVDTKSSSSRGVTLLHYLV 851
E+ +S LLEL L +GNYMN G A GF ++ L KL DTK S+ + +TLLH+L
Sbjct: 121 ELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTK-SADQKMTLLHFLA 179
Query: 852 ELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPLVPG 911
EL E EVLK ++L HV++AS+VS + L+ + Q++ + +V R+++
Sbjct: 180 ELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQ-NFPAATDEK 238
Query: 912 DRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLT 971
D+F+ M F+ A + +++ + +M+T + F D + E+FF+ F
Sbjct: 239 DKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRN 298
Query: 972 TLNEAKLDNENMKRRREEEEKRARQDAEMKKRTTDR 1007
+A +N+ +RRE EEK R +K +R
Sbjct: 299 MFLQAVKENQ---KRRETEEKMRRAKLAKEKAEKER 331
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 411 | Back information, alignment and structure |
|---|
| >d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 343 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1074 | |||
| d1v9da_ | 332 | Diaphanous protein homolog 1, dia1 {Mouse (Mus mus | 100.0 | |
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d2bnxa1 | 343 | Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) { | 100.0 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 93.78 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 90.87 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 90.57 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 86.83 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 85.92 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 85.18 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 80.55 |
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Diaphanous protein homolog 1, dia1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.5e-64 Score=568.05 Aligned_cols=309 Identities=32% Similarity=0.527 Sum_probs=274.0
Q ss_pred CccccccchhhhhhHHHHhccCCCCHHHHHHHHHcCCCCCCCCHHHHHHHHhcCCCHHHHHHHhhccC--CCCChHHHHH
Q psy8075 674 SKILSVIDGRRAQNCTILLSKLKMTDEEISKAILSMDSADQLPLDMLEQLLKFTPNTEEAALLEEHST--ETLARADRFL 751 (1074)
Q Consensus 674 ~k~isvLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~~L~~e~l~~Llk~lPt~eE~~~l~~~~~--~~L~~aeqF~ 751 (1074)
+|+|+|||+||||||+|+|++|++|+++|+++|++||.. .|+.|.|+.|++++||+||++.|++|.+ +.|++||||+
T Consensus 1 vk~i~vLd~kr~~ni~I~L~~~k~~~~~i~~ai~~~D~~-~l~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~E~f~ 79 (332)
T d1v9da_ 1 VKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEA-VLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFG 79 (332)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTT-TCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHHHHHH
T ss_pred CceeEeccHHHHHHHHHHHhhCCcCHHHHHHHHHhCCcc-cCCHHHHHHHHHhCcCHHHHHHHHHhcCChhhcChHHHHH
Confidence 467999999999999999999999999999999999995 9999999999999999999999999987 8999999999
Q ss_pred HHHhCCCchHHHHHHHHHHHhhHhhHHhhhHhHHHHHHHHHHHhhcHhHHHHHHHHHHhccccCCC-CCCCccceecccc
Q psy8075 752 YEISKIPHYEQRLRCLHYKKRFHFWISDIEPKIKSVMEASREVTRSRRLRKLLELVLALGNYMNKG-ARGNASGFRLTSL 830 (1074)
Q Consensus 752 ~~l~~ip~~~~RL~~l~fk~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~IL~iGNymN~g-~rg~A~GFkL~sL 830 (1074)
++|+.||+|..||++|+|+.+|++.++++.+.+..+.+||++|++|++|+.||++||++|||||+| .||+|+||+|+||
T Consensus 80 ~~l~~ip~~~~Rl~~~~~~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~~L~~iL~~GN~mN~g~~~g~A~GFkL~sL 159 (332)
T d1v9da_ 80 VVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFL 159 (332)
T ss_dssp HHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------CCH
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhHHHHHHHHHHhcchhccccccccccccCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred ccccccccCCCCCcchHHHHHHHHHHhhhhccchhhhhhhHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy8075 831 NKLVDTKSSSSRGVTLLHYLVELAEKRFKEVLKLEEDLCHVKEASKVSMKELENDMTQLRNNLKEVSREIEFQRVQPLVP 910 (1074)
Q Consensus 831 ~KL~dtKs~~d~k~TLLhylv~~v~~~~p~ll~f~~eL~~v~~Aakvs~~~l~~d~~~l~~~l~~~~~el~~~~~~~~~~ 910 (1074)
.||.||||+ |+++||||||++++++++|+++.|.+||++|..|+++++++|.+++++|.+++..++++++.... ..++
T Consensus 160 ~kL~d~Ks~-d~~~tLL~~iv~~~~~~~p~l~~~~~eL~~v~~ask~~~~~l~~~~~~l~~~l~~~~~~l~~~~~-~~~~ 237 (332)
T d1v9da_ 160 CKLRDTKSA-DQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPA-ATDE 237 (332)
T ss_dssp HHHHHSBCS-STTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCC-CSSS
T ss_pred HhHhhccCC-CCCccHHHHHHHHHHHhCchhccchhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccc-cccc
Confidence 999999996 89999999999999999999999999999999999999999999999999999999999986432 3367
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy8075 911 GDRFLPVMKEFLTSATCRLSEIEDLFQDMKTRFDRAVRLFGEDNSSIQPEDFFVIFDTFLTTLNEAKLDNENMKR 985 (1074)
Q Consensus 911 ~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfGEd~~~~~~~eFF~~~~~F~~~f~~a~~en~~~~~ 985 (1074)
+|+|..+|.+|+..|..++..++..+.++.+.|.+++.|||||++++++++||++|++|+..|++|+++|+++++
T Consensus 238 ~d~f~~~~~~Fl~~a~~~l~~l~~~~~~~~~~~~~~~~yfgEd~~~~~~~efF~~~~~F~~~~~~a~~e~~~~~~ 312 (332)
T d1v9da_ 238 KDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRE 312 (332)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999998866433
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|