Psyllid ID: psy8116
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 591 | 2.2.26 [Sep-21-2011] | |||||||
| Q16720 | 1220 | Plasma membrane calcium-t | yes | N/A | 0.932 | 0.451 | 0.648 | 0.0 | |
| Q64568 | 1258 | Plasma membrane calcium-t | yes | N/A | 0.932 | 0.437 | 0.646 | 0.0 | |
| P23220 | 1220 | Plasma membrane calcium-t | no | N/A | 0.952 | 0.461 | 0.630 | 0.0 | |
| P20020 | 1258 | Plasma membrane calcium-t | no | N/A | 0.932 | 0.437 | 0.638 | 0.0 | |
| P11506 | 1243 | Plasma membrane calcium-t | no | N/A | 0.937 | 0.445 | 0.637 | 0.0 | |
| P23634 | 1241 | Plasma membrane calcium-t | no | N/A | 0.928 | 0.442 | 0.642 | 0.0 | |
| Q9R0K7 | 1198 | Plasma membrane calcium-t | no | N/A | 0.937 | 0.462 | 0.637 | 0.0 | |
| Q01814 | 1243 | Plasma membrane calcium-t | no | N/A | 0.937 | 0.445 | 0.636 | 0.0 | |
| P11505 | 1258 | Plasma membrane calcium-t | no | N/A | 0.932 | 0.437 | 0.631 | 0.0 | |
| Q64542 | 1203 | Plasma membrane calcium-t | no | N/A | 0.928 | 0.456 | 0.633 | 0.0 |
| >sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/569 (64%), Positives = 436/569 (76%), Gaps = 18/569 (3%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+ IPE+ F ++ R M TVI GG+R +++L + C I +G
Sbjct: 561 VREQIPEDKLYKVYTF--NSVRKSMS-TVIRMPDGGFRLFSKGASEILLKKCTNILNSNG 617
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
L F +D +VR +IEPMACDGLRTI IAYRDF G+ EP+WD+E +
Sbjct: 618 ELRGFRPRDRDDMVRKIIEPMACDGLRTICIAYRDFSAGQ----------EPDWDNENEV 667
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG+D
Sbjct: 668 VGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGED 727
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS + R+
Sbjct: 728 FLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQ 787
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 788 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 847
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 848 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 907
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR KPLIS+TMMKNILG A+YQL ++FTLLFVG+ DI +GR A S P++
Sbjct: 908 LLLRKPYGRDKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSE 967
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFNTFV M LFNEINARKIHG+RNVF+G FSNPIF +I T Q+ I+QFG +
Sbjct: 968 HYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKP 1027
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRG-HPEEYTEAIQLGEE 536
FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T+ E
Sbjct: 1028 FSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGE 1087
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
+ D A+++ R GQILW RGL R+QTQ+
Sbjct: 1088 EEID-HAERELRRGQILWFRGLNRIQTQI 1115
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/569 (64%), Positives = 436/569 (76%), Gaps = 18/569 (3%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+ IPE+ F ++ R M TVI GG+R +++L + C I +G
Sbjct: 561 VREQIPEDQLYKVYTF--NSVRKSMS-TVIRMPDGGFRLFSKGASEILLKKCTNILNSNG 617
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
L F +D +V+ +IEPMACDGLRTI IAYRDF + EP+WD+E +
Sbjct: 618 ELRGFRPRDRDDMVKKIIEPMACDGLRTICIAYRDFSAIQ----------EPDWDNENEV 667
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG+D
Sbjct: 668 VGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGED 727
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS + R+
Sbjct: 728 FLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQ 787
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 788 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 847
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 848 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 907
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVG+ DI +GR A S P++
Sbjct: 908 LLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSE 967
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFNTFV M LFNEINARKIHG+RNVF+G FSNPIF +I T Q+ I+QFG +
Sbjct: 968 HYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKP 1027
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRG-HPEEYTEAIQLGEE 536
FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T+ E
Sbjct: 1028 FSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGE 1087
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
+ D A+++ R GQILW RGL R+QTQ+
Sbjct: 1088 EEID-HAERELRRGQILWFRGLNRIQTQM 1115
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P23220|AT2B1_PIG Plasma membrane calcium-transporting ATPase 1 OS=Sus scrofa GN=ATP2B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/584 (63%), Positives = 443/584 (75%), Gaps = 21/584 (3%)
Query: 1 MRDDIPEENADPGLH--FQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGR 55
+R++IPEE L+ + ++ R M TV+ G YR ++++ + C I
Sbjct: 563 VRNEIPEE----ALYKVYTFNSVRKSMS-TVLKNSDGSYRIFSKGASEIILKKCFKILSA 617
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
+G + F +D +V+ VIEPMA +GLRTI +A+RDF G + EP WD+E
Sbjct: 618 NGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAG---------EPEPEWDNEN 668
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
IV LT + VVGIEDPVRPEVPDAI+KCQRAGITVRMVTGDNINTAR+IATKCGIL PG
Sbjct: 669 DIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPG 728
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DFL LEGK+FNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS VSD
Sbjct: 729 EDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSDQ 788
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
R+VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 789 RQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 848
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT
Sbjct: 849 YDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPT 908
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
LLLRKPYGR KPLIS+TMMKNILG A YQL VVFTLLF G+K DI +GR A + P
Sbjct: 909 ESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPP 968
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++H+T++FNTFV M LFNEINARKIHG+RNVFEG F+N IF +I T Q+ I+QFG
Sbjct: 969 SEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGG 1028
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGE 535
+ FS L++EQWLW +F G+GTLLWGQ+++T+PT +L + G G +E +L E
Sbjct: 1029 KPFSCSELSIEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAE 1088
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE 579
+ + A+++ R GQILW RGL R+QTQ+ VV+ YE
Sbjct: 1089 DVEEIDHAERELRRGQILWFRGLNRIQTQIR--VVNAFRSSLYE 1130
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/570 (63%), Positives = 438/570 (76%), Gaps = 19/570 (3%)
Query: 1 MRDDIPEENADPGLH--FQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGR 55
+R++IPEE L+ + ++ R M TV+ G YR ++++ + C I
Sbjct: 563 VRNEIPEE----ALYKVYTFNSVRKSMS-TVLKNSDGSYRIFSKGASEIILKKCFKILSA 617
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
+G + F +D +V+ VIEPMA +GLRTI +A+RDF G + EP WD+E
Sbjct: 618 NGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAG---------EPEPEWDNEN 668
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
IV LT + VVGIEDPVRPEVPDAI+KCQRAGITVRMVTGDNINTAR+IATKCGIL PG
Sbjct: 669 DIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPG 728
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DFL LEGK+FNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS VSD
Sbjct: 729 EDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSDQ 788
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
R+VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 789 RQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 848
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT
Sbjct: 849 YDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPT 908
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
LLLRKPYGR KPLIS+TMMKNILG A YQL VVFTLLF G+K DI +GR A + P
Sbjct: 909 ESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPP 968
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++H+T++FNTFV M LFNEINARKIHG+RNVFEG F+N IF +I T Q+ I+QFG
Sbjct: 969 SEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGG 1028
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGE 535
+ FS L++EQWLW +F G+GTLLWGQ+++T+PT +L + G G +E +L E
Sbjct: 1029 KPFSCSELSIEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAE 1088
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQV 565
+ + A+++ R GQILW RGL R+QTQ+
Sbjct: 1089 DVEEIDHAERELRRGQILWFRGLNRIQTQM 1118
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/566 (63%), Positives = 433/566 (76%), Gaps = 12/566 (2%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKG-GGYRSLPTKVLPRSCAFIYGRDGNL 59
+R +PEE F S +++ V +P + Y ++++ + C I G
Sbjct: 587 VRSQMPEEKLYKVYTFN-SVRKSMSTVIKMPDESFRMYSKGASEIVLKKCCKILSGAGEP 645
Query: 60 EKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVN 119
F +D +V+ VIEPMACDGLRTI +AYRDF P E P+WD+E I+N
Sbjct: 646 RVFRPRDRDEMVKKVIEPMACDGLRTICVAYRDF-PSSPE---------PDWDNENDILN 695
Query: 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL 179
LT +CVVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI+ PG+DFL
Sbjct: 696 ELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFL 755
Query: 180 ILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVV 239
LEGKEFNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS ++ R+VV
Sbjct: 756 CLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVV 815
Query: 240 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 299
AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI
Sbjct: 816 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 875
Query: 300 AKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLL 359
+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL
Sbjct: 876 SKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLL 935
Query: 360 LRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHF 419
LRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVG+K+ I +GR A S P++H+
Sbjct: 936 LRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHY 995
Query: 420 TVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFS 479
T+IFNTFV M LFNEINARKIHG+RNVF+G F NPIF +I T A Q+ I+QFG + FS
Sbjct: 996 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFS 1055
Query: 480 TKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEHKF 539
L L+QW+WC+F G+G L+WGQV+ T+PT +L + GR +E +L E+ +
Sbjct: 1056 CSPLQLDQWMWCIFIGLGELVWGQVIATIPTSRLKFLKEAGRLTQKEEIPEEELNEDVEE 1115
Query: 540 DPDADKKPRAGQILWIRGLTRLQTQV 565
A+++ R GQILW RGL R+QTQ+
Sbjct: 1116 IDHAERELRRGQILWFRGLNRIQTQI 1141
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P23634|AT2B4_HUMAN Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/568 (64%), Positives = 427/568 (75%), Gaps = 19/568 (3%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+++PEE F ++ R M TVI GG+R ++++ R C I R G
Sbjct: 553 VRNEVPEEKLYKVYTF--NSVRKSMS-TVIRNPNGGFRMYSKGASEIILRKCNRILDRKG 609
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
F + +D +VR VIEPMACDGLRTI IAYRDF DTEP+WD+E I
Sbjct: 610 EAVPFKNKDRDDMVRTVIEPMACDGLRTICIAYRDF-----------DDTEPSWDNENEI 658
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
+ LT + VVGIEDPVRPEVPDAI KC++AGITVRMVTGDNINTAR+IATKCGIL PGDD
Sbjct: 659 LTELTCIAVVGIEDPVRPEVPDAIAKCKQAGITVRMVTGDNINTARAIATKCGILTPGDD 718
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNR +R+ G+V+Q LDK+WP+LRVLARSSPTDK+TLVKGIIDS V + R+
Sbjct: 719 FLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEHRQ 778
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 779 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 838
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 839 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 898
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LL R+PYGR KPLIS+TMMKNILG A YQL V+F L+F G+K DI +GR A S P+Q
Sbjct: 899 LLKRRPYGRNKPLISRTMMKNILGHAFYQLIVIFILVFAGEKFFDIDSGRKAPLHSPPSQ 958
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T++FNTFV M LFNEIN+RKIHG++NVF G + N IF S+ T Q+FI++FG +
Sbjct: 959 HYTIVFNTFVLMQLFNEINSRKIHGEKNVFSGIYRNIIFCSVVLGTFICQIFIVEFGGKP 1018
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEH 537
FS SL+L QWLWCLF GIG LLWGQ ++ +PTR L + G G +E E + E
Sbjct: 1019 FSCTSLSLSQWLWCLFIGIGELLWGQFISAIPTRSLKFLKEAGHGTTKE--EITKDAEGL 1076
Query: 538 KFDPDADKKPRAGQILWIRGLTRLQTQV 565
A+ + R GQILW RGL R+QTQ+
Sbjct: 1077 DEIDHAEMELRRGQILWFRGLNRIQTQI 1104
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/566 (63%), Positives = 433/566 (76%), Gaps = 12/566 (2%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKG-GGYRSLPTKVLPRSCAFIYGRDGNL 59
+R +PEE F S +++ V +P + Y ++++ + C I G
Sbjct: 542 VRSQMPEEKLYKVYTFN-SVRKSMSTVIKMPDESFRMYSKGASEIVLKKCCKILSGAGEA 600
Query: 60 EKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVN 119
F +D +V+ VIEPMACDGLRTI +AYRDF P E P+WD+E I+N
Sbjct: 601 RVFRPRDRDEMVKKVIEPMACDGLRTICVAYRDF-PSSPE---------PDWDNENDILN 650
Query: 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL 179
LT +CVVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI+ PG+DFL
Sbjct: 651 ELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFL 710
Query: 180 ILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVV 239
LEGKEFNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS ++ R+VV
Sbjct: 711 CLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVV 770
Query: 240 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 299
AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI
Sbjct: 771 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 830
Query: 300 AKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLL 359
+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL
Sbjct: 831 SKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLL 890
Query: 360 LRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHF 419
LRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVG+K+ I +GR A S P++H+
Sbjct: 891 LRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHY 950
Query: 420 TVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFS 479
T+IFNTFV M LFNEINARKIHG+RNVF+G F NPIF +I T A Q+ I+QFG + FS
Sbjct: 951 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFS 1010
Query: 480 TKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEHKF 539
L L+QW+WC+F G+G L+WGQV+ T+PT +L + GR +E +L E+ +
Sbjct: 1011 CSPLQLDQWMWCIFIGLGELVWGQVIATIPTSRLKFLKEAGRLTQKEEIPEEELNEDVEE 1070
Query: 540 DPDADKKPRAGQILWIRGLTRLQTQV 565
A+++ R GQILW RGL R+QTQ+
Sbjct: 1071 IDHAERELRRGQILWFRGLNRIQTQI 1096
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Plays a role in maintaining balance and hearing. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/566 (63%), Positives = 432/566 (76%), Gaps = 12/566 (2%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKG-GGYRSLPTKVLPRSCAFIYGRDGNL 59
+R +PEE F S +++ V +P + Y ++++ + C I G
Sbjct: 587 VRSQMPEEKLYKVYTFN-SVRKSMSTVIKLPDESFRMYSKGASEIVLKKCCKILNGAGEP 645
Query: 60 EKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVN 119
F +D +V+ VIEPMACDGLRTI +AYRDF P E P+WD+E I+N
Sbjct: 646 RVFRPRDRDEMVKKVIEPMACDGLRTICVAYRDF-PSSPE---------PDWDNENDILN 695
Query: 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL 179
LT +CVVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI+ PG+DFL
Sbjct: 696 ELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFL 755
Query: 180 ILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVV 239
LEGKEFNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS ++ R+VV
Sbjct: 756 CLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQRQVV 815
Query: 240 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 299
AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI
Sbjct: 816 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 875
Query: 300 AKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLL 359
+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL
Sbjct: 876 SKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTETLL 935
Query: 360 LRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHF 419
LRKPYGR KPLIS+TMMKNILG A+YQL ++FTLLFVG+K+ I +GR A S P++H+
Sbjct: 936 LRKPYGRNKPLISRTMMKNILGHAVYQLALIFTLLFVGEKMFQIDSGRNAPLHSPPSEHY 995
Query: 420 TVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFS 479
T+IFNTFV M LFNEINARKIHG+RNVF+G F NPIF +I T A Q+ I+QFG + FS
Sbjct: 996 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFS 1055
Query: 480 TKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEHKF 539
L L+QW+WC+F G+G L+WGQV+ T+PT +L + GR +E +L E+ +
Sbjct: 1056 CSPLQLDQWMWCIFIGLGELVWGQVIATIPTSRLKFLKEAGRLTQKEEIPEEELNEDVEE 1115
Query: 540 DPDADKKPRAGQILWIRGLTRLQTQV 565
A+++ R GQILW RGL R+QTQ+
Sbjct: 1116 IDHAERELRRGQILWFRGLNRIQTQI 1141
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/570 (63%), Positives = 438/570 (76%), Gaps = 19/570 (3%)
Query: 1 MRDDIPEENADPGLH--FQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGR 55
+R++IPEE L+ + ++ R M TV+ G +R ++++ + C I
Sbjct: 563 VRNEIPEE----ALYKVYTFNSVRKSMS-TVLKNSDGSFRIFSKGASEIILKKCFKILSA 617
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
+G + F +D +V+ VIEPMA +GLRTI +A+RDF G + EP WD+E
Sbjct: 618 NGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAG---------EPEPEWDNEN 668
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
+V LT + VVGIEDPVRPEVP+AI+KCQRAGITVRMVTGDNINTAR+IATKCGIL PG
Sbjct: 669 DVVTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMVTGDNINTARAIATKCGILHPG 728
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DFL LEGK+FNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS VS+
Sbjct: 729 EDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVSEQ 788
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
R+VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 789 RQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 848
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT
Sbjct: 849 YDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPT 908
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
LLLRKPYGR KPLIS+TMMKNILG A YQL VVFTLLF G+K DI +GR A + P
Sbjct: 909 ESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPP 968
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++H+T++FNTFV M LFNEINARKIHG+RNVFEG F+N IF +I T Q+ I+QFG
Sbjct: 969 SEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGG 1028
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGE 535
+ FS L++EQWLW +F G+GTLLWGQ+++T+PT +L + G G +E +L E
Sbjct: 1029 KPFSCSELSIEQWLWSIFLGMGTLLWGQLISTIPTSRLKFLKEAGHGTQKEEIPEEELAE 1088
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQV 565
+ + A+++ R GQILW RGL R+QTQ+
Sbjct: 1089 DVEEIDHAERELRRGQILWFRGLNRIQTQM 1118
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q64542|AT2B4_RAT Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/568 (63%), Positives = 429/568 (75%), Gaps = 19/568 (3%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R ++PEE F ++ R M TVI + GG+R ++++ R C I ++G
Sbjct: 553 VRSEMPEEKLFKVYTF--NSVRKSMS-TVIRKPEGGFRVFSKGASEIMLRKCDRILNKEG 609
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+ F + +D +VRNVIEPMA +GLRTI IAYRDF EP+W++E I
Sbjct: 610 GIVPFKTKDRDNMVRNVIEPMASEGLRTIGIAYRDF-----------DGEEPSWENENEI 658
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
L + VVGIEDPVRPEVPDAI KC+RAGITVRMVTGDN+NTAR+IATKCGIL PGDD
Sbjct: 659 FTGLVCIAVVGIEDPVRPEVPDAINKCKRAGITVRMVTGDNVNTARAIATKCGILTPGDD 718
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNR +R+ G+V+Q LDKVWPRLRVLARSSPTDK+TLVKGIIDS + + R+
Sbjct: 719 FLCLEGKEFNRLIRNEKGEVEQEKLDKVWPRLRVLARSSPTDKHTLVKGIIDSNIGEQRQ 778
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 779 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 838
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 839 SISKFLQFQLTVNVVAVIVAFSGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTDS 898
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LL R+PYGR KPLIS+TMMKNILG A+YQL +VF L+F GDKL DI +GR A S P+Q
Sbjct: 899 LLRRRPYGRNKPLISRTMMKNILGHAVYQLGIVFLLVFAGDKLFDIDSGRKAPLNSPPSQ 958
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T++FNTFV M LFNEIN+RKIHG++NVF G + N IF S+ T Q+ I++ G +
Sbjct: 959 HYTIVFNTFVLMQLFNEINSRKIHGEKNVFAGVYRNIIFCSVVLGTFFCQILIVEVGGKP 1018
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEH 537
FS +LT+EQW+WCLF GIG LLWGQV++ +PT+ L + G G +E G E
Sbjct: 1019 FSCTNLTMEQWMWCLFIGIGELLWGQVISAIPTKSLKFLKEAGHGSDKEEISKDAEGLE- 1077
Query: 538 KFDPDADKKPRAGQILWIRGLTRLQTQV 565
+ D A+ + R GQILW+RGL R+QTQ+
Sbjct: 1078 EID-HAEMELRRGQILWVRGLNRIQTQI 1104
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 591 | ||||||
| 328724399 | 1218 | PREDICTED: plasma membrane calcium-trans | 0.949 | 0.460 | 0.832 | 0.0 | |
| 328724397 | 1170 | PREDICTED: plasma membrane calcium-trans | 0.949 | 0.479 | 0.830 | 0.0 | |
| 383859194 | 1199 | PREDICTED: plasma membrane calcium-trans | 0.964 | 0.475 | 0.825 | 0.0 | |
| 380018752 | 1189 | PREDICTED: plasma membrane calcium-trans | 0.947 | 0.470 | 0.831 | 0.0 | |
| 328783833 | 1186 | PREDICTED: plasma membrane calcium-trans | 0.947 | 0.472 | 0.831 | 0.0 | |
| 383859192 | 1176 | PREDICTED: plasma membrane calcium-trans | 0.954 | 0.479 | 0.828 | 0.0 | |
| 383859190 | 1108 | PREDICTED: plasma membrane calcium-trans | 0.954 | 0.509 | 0.828 | 0.0 | |
| 383859188 | 1172 | PREDICTED: plasma membrane calcium-trans | 0.947 | 0.477 | 0.833 | 0.0 | |
| 383859186 | 1194 | PREDICTED: plasma membrane calcium-trans | 0.947 | 0.469 | 0.834 | 0.0 | |
| 340729533 | 1193 | PREDICTED: plasma membrane calcium-trans | 0.947 | 0.469 | 0.829 | 0.0 |
| >gi|328724399|ref|XP_001945158.2| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/568 (83%), Positives = 521/568 (91%), Gaps = 7/568 (1%)
Query: 2 RDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDGN 58
RDDIPEE F ++ R M TVIPR+GGGYR ++++ + C++IYGRDG
Sbjct: 544 RDDIPEEMLTRVYTF--NSVRKSMS-TVIPREGGGYRLFTKGASEIVLKKCSYIYGRDGR 600
Query: 59 LEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEI-NQVHIDTEPNWDDEEYI 117
LEKFTREMQDRLVRNVIEPMA DGLRTIS+AY+DF+PGK + NQVH + EP+W+ E+ I
Sbjct: 601 LEKFTREMQDRLVRNVIEPMASDGLRTISVAYKDFIPGKTDSPNQVHYEGEPDWESEDSI 660
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT LCVVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDN+NTARSIATKCGI K G+D
Sbjct: 661 VCDLTALCVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNVNTARSIATKCGIYKTGED 720
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
+L+LEGKEFN+R+RDANGDVQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSKVSDSRE
Sbjct: 721 WLVLEGKEFNQRIRDANGDVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKVSDSRE 780
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 781 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 840
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PT D
Sbjct: 841 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTSD 900
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGRTKPLIS+TMMKNI+GQA+YQLTV+F+LLF GDK+LDIPTGRGAEFGSEPTQ
Sbjct: 901 LLLRKPYGRTKPLISRTMMKNIIGQAVYQLTVIFSLLFAGDKMLDIPTGRGAEFGSEPTQ 960
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
HFTVIFNTFV MTLFNEINARKIHGQRNVF+GFF+NPIFYSIW T SQVFIIQ+G++A
Sbjct: 961 HFTVIFNTFVMMTLFNEINARKIHGQRNVFQGFFTNPIFYSIWIGTVLSQVFIIQYGKDA 1020
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEH 537
FSTKSLTLEQW+WCL FG GTLLWGQ+VTTVPTRK+PK+LSWGRGHPEEYT AI LGEE+
Sbjct: 1021 FSTKSLTLEQWMWCLLFGFGTLLWGQIVTTVPTRKIPKLLSWGRGHPEEYTNAINLGEEN 1080
Query: 538 KFDPDADKKPRAGQILWIRGLTRLQTQV 565
++DPD+ +KPRAGQILWIRGLTRLQTQV
Sbjct: 1081 RYDPDSGQKPRAGQILWIRGLTRLQTQV 1108
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328724397|ref|XP_003248135.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 3 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/568 (83%), Positives = 521/568 (91%), Gaps = 7/568 (1%)
Query: 2 RDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDGN 58
RDDIPEE F ++ R M TVIPR+GGGYR ++++ + C++IYGRDG
Sbjct: 544 RDDIPEEMLTRVYTF--NSVRKSMS-TVIPREGGGYRLFTKGASEIVLKKCSYIYGRDGR 600
Query: 59 LEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEI-NQVHIDTEPNWDDEEYI 117
LEKFTREMQDRLVRNVIEPMA DGLRTIS+AY+DF+PGK + NQVH + EP+W+ E+ I
Sbjct: 601 LEKFTREMQDRLVRNVIEPMASDGLRTISVAYKDFIPGKTDSPNQVHYEGEPDWESEDSI 660
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT LCVVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDN+NTARSIATKCGI K G+D
Sbjct: 661 VCDLTALCVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNVNTARSIATKCGIYKTGED 720
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
+L+LEGKEFN+R+RDANGDVQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSKVSDSRE
Sbjct: 721 WLVLEGKEFNQRIRDANGDVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKVSDSRE 780
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 781 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 840
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PT D
Sbjct: 841 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTSD 900
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGRTKPLIS+TMMKNI+GQA+YQLTV+F+LLF GDK+LDIPTGRGAEFGSEPTQ
Sbjct: 901 LLLRKPYGRTKPLISRTMMKNIIGQAVYQLTVIFSLLFAGDKMLDIPTGRGAEFGSEPTQ 960
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
HFTVIFNTFV MTLFNEINARKIHGQRNVF+GFF+NPIFYSIW T SQVFIIQ+G++A
Sbjct: 961 HFTVIFNTFVMMTLFNEINARKIHGQRNVFQGFFTNPIFYSIWIGTVLSQVFIIQYGKDA 1020
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEEH 537
FSTKSLTLEQW+WCL FG GTLLWGQ+VTTVPTRK+PK+LSWGRGHPEEYT AI LGEE+
Sbjct: 1021 FSTKSLTLEQWMWCLLFGFGTLLWGQIVTTVPTRKIPKLLSWGRGHPEEYTNAINLGEEN 1080
Query: 538 KFDPDADKKPRAGQILWIRGLTRLQTQV 565
++DPD+ +KPRAGQILWIRGLTRLQTQ+
Sbjct: 1081 RYDPDSGQKPRAGQILWIRGLTRLQTQL 1108
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859194|ref|XP_003705081.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 5 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/579 (82%), Positives = 522/579 (90%), Gaps = 9/579 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M TVIPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 536 IRDDQPEETFTRVYTF--NSVRKSMS-TVIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 592
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFTREMQ+RLV+NVIEPMACDGLRTIS+AYRDFVPGKAEINQVHID EPNWDDEE I
Sbjct: 593 HLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENI 652
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVPDAIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 653 VNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 712
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD+NG+VQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 713 FLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSRE 772
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 773 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 832
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPD
Sbjct: 833 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPD 892
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLR+PYGRTKPLIS+TMMKNILGQA+YQL+V+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 893 LLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPT 952
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFTVIFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFYSIW T SQV IIQ+G+
Sbjct: 953 QHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKM 1012
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ AI LG+E
Sbjct: 1013 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIG-AINLGDE 1071
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQ 575
KFDPD+DKKPR GQILWIRGLTRLQTQ+ PV+ LQ
Sbjct: 1072 -KFDPDSDKKPRTGQILWIRGLTRLQTQIHMPVIGGELQ 1109
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380018752|ref|XP_003693287.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/569 (83%), Positives = 518/569 (91%), Gaps = 9/569 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M T IPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 530 IRDDQPEETFTRVYTF--NSVRKSMS-TAIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 586
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFT+EMQ+RLV+NVIEPMACDGLRTI IAYRDFVPGKAEINQVHID EPNWDDEE +
Sbjct: 587 HLEKFTKEMQERLVKNVIEPMACDGLRTICIAYRDFVPGKAEINQVHIDNEPNWDDEENV 646
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVP+AIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 647 VNNLTCLCIVGIEDPVRPEVPEAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 706
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD++G+VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 707 FLILEGKEFNRRIRDSSGEVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKASASRE 766
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 767 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 826
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVN+VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD
Sbjct: 827 SIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 886
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLRKPYGRTKPLIS+TMMKNILGQAIYQLTV+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 887 LLLRKPYGRTKPLISRTMMKNILGQAIYQLTVIFMLLFVGDKMLDIETGRGVAQAGGGPT 946
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFT+IFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFY+IW +T SQV IIQ+G+
Sbjct: 947 QHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYTIWIMTCLSQVVIIQYGKM 1006
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ + AI LG+E
Sbjct: 1007 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIS-AINLGDE 1065
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
KFDPD+DKKPRAGQILWIRGLTRLQTQV
Sbjct: 1066 -KFDPDSDKKPRAGQILWIRGLTRLQTQV 1093
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328783833|ref|XP_003250350.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/569 (83%), Positives = 518/569 (91%), Gaps = 9/569 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M T IPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 527 IRDDQPEETFTRVYTF--NSVRKSMS-TAIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 583
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFT+EMQ+RLV+NVIEPMACDGLRTI IAYRDFVPGKAEINQVHID EPNWDDEE +
Sbjct: 584 HLEKFTKEMQERLVKNVIEPMACDGLRTICIAYRDFVPGKAEINQVHIDNEPNWDDEENV 643
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVP+AIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 644 VNNLTCLCIVGIEDPVRPEVPEAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 703
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD++G+VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 704 FLILEGKEFNRRIRDSSGEVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKASVSRE 763
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 764 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 823
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVN+VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD
Sbjct: 824 SIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 883
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLRKPYGRTKPLIS+TMMKNILGQAIYQLTV+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 884 LLLRKPYGRTKPLISRTMMKNILGQAIYQLTVIFMLLFVGDKMLDIETGRGVAQAGGGPT 943
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFT+IFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFY+IW +T SQV IIQ+G+
Sbjct: 944 QHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYTIWIVTCLSQVVIIQYGKM 1003
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ + AI LG+E
Sbjct: 1004 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIS-AINLGDE 1062
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
KFDPD+DKKPRAGQILWIRGLTRLQTQV
Sbjct: 1063 -KFDPDSDKKPRAGQILWIRGLTRLQTQV 1090
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859192|ref|XP_003705080.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 4 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/573 (82%), Positives = 519/573 (90%), Gaps = 9/573 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M TVIPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 536 IRDDQPEETFTRVYTF--NSVRKSMS-TVIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 592
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFTREMQ+RLV+NVIEPMACDGLRTIS+AYRDFVPGKAEINQVHID EPNWDDEE I
Sbjct: 593 HLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENI 652
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVPDAIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 653 VNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 712
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD+NG+VQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 713 FLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSRE 772
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 773 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 832
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPD
Sbjct: 833 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPD 892
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLR+PYGRTKPLIS+TMMKNILGQA+YQL+V+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 893 LLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPT 952
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFTVIFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFYSIW T SQV IIQ+G+
Sbjct: 953 QHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKM 1012
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ AI LG+E
Sbjct: 1013 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIG-AINLGDE 1071
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQVSQPV 569
KFDPD+DKKPR GQILWIRGLTRLQTQ+ P+
Sbjct: 1072 -KFDPDSDKKPRTGQILWIRGLTRLQTQIHMPI 1103
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859190|ref|XP_003705079.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 3 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/573 (82%), Positives = 520/573 (90%), Gaps = 9/573 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M TVIPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 536 IRDDQPEETFTRVYTF--NSVRKSMS-TVIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 592
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFTREMQ+RLV+NVIEPMACDGLRTIS+AYRDFVPGKAEINQVHID EPNWDDEE I
Sbjct: 593 HLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENI 652
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVPDAIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 653 VNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 712
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD+NG+VQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 713 FLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSRE 772
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 773 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 832
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPD
Sbjct: 833 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPD 892
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLR+PYGRTKPLIS+TMMKNILGQA+YQL+V+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 893 LLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPT 952
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFTVIFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFYSIW T SQV IIQ+G+
Sbjct: 953 QHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKM 1012
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ AI LG+E
Sbjct: 1013 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIG-AINLGDE 1071
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQVSQPV 569
KFDPD+DKKPR GQILWIRGLTRLQTQ ++P+
Sbjct: 1072 -KFDPDSDKKPRTGQILWIRGLTRLQTQPAEPI 1103
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859188|ref|XP_003705078.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/569 (83%), Positives = 517/569 (90%), Gaps = 9/569 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M TVIPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 536 IRDDQPEETFTRVYTF--NSVRKSMS-TVIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 592
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFTREMQ+RLV+NVIEPMACDGLRTIS+AYRDFVPGKAEINQVHID EPNWDDEE I
Sbjct: 593 HLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENI 652
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVPDAIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 653 VNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 712
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD+NG+VQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 713 FLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSRE 772
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 773 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 832
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPD
Sbjct: 833 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPD 892
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLR+PYGRTKPLIS+TMMKNILGQA+YQL+V+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 893 LLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPT 952
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFTVIFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFYSIW T SQV IIQ+G+
Sbjct: 953 QHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVIIIQYGKM 1012
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ AI LG+E
Sbjct: 1013 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIG-AINLGDE 1071
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
KFDPD+DKKPR GQILWIRGLTRLQTQ+
Sbjct: 1072 -KFDPDSDKKPRTGQILWIRGLTRLQTQI 1099
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859186|ref|XP_003705077.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/569 (83%), Positives = 517/569 (90%), Gaps = 9/569 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M TVIPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 535 IRDDQPEETFTRVYTF--NSVRKSMS-TVIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 591
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFTREMQ+RLV+NVIEPMACDGLRTIS+AYRDFVPGKAEINQVHID EPNWDDEE I
Sbjct: 592 HLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEINQVHIDNEPNWDDEENI 651
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVPDAIRKCQ+AGITVRMVTGDNINTARSIA KCGILKP +D
Sbjct: 652 VNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGILKPNED 711
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RD+NG+VQQHLLDKVWP+LRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 712 FLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKYTLVKGIIDSKASVSRE 771
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 772 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 831
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE+PTPD
Sbjct: 832 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATELPTPD 891
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLR+PYGRTKPLIS+TMMKNILGQA+YQL+V+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 892 LLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQAGGGPT 951
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFTVIFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFYSIW T SQV IIQ+G+
Sbjct: 952 QHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIGTCLSQVVIIQYGKM 1011
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ AI LG+E
Sbjct: 1012 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIG-AINLGDE 1070
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
KFDPD+DKKPR GQILWIRGLTRLQTQV
Sbjct: 1071 -KFDPDSDKKPRTGQILWIRGLTRLQTQV 1098
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340729533|ref|XP_003403055.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/569 (82%), Positives = 516/569 (90%), Gaps = 9/569 (1%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDG 57
+RDD PEE F ++ R M TVIPRKGGGYR ++++ + CAFIYGR+G
Sbjct: 534 IRDDQPEETFTRVYTF--NSVRKSMS-TVIPRKGGGYRLFTKGASEIIMKKCAFIYGREG 590
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
+LEKFTREMQ+RLV+NVIEPMACDGLRTI +AYRDFVPGKAEINQVHID +PNW+DEE I
Sbjct: 591 HLEKFTREMQERLVKNVIEPMACDGLRTICVAYRDFVPGKAEINQVHIDNDPNWEDEENI 650
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
VNNLT LC+VGIEDPVRPEVPDAIRKCQ+AGITVRMVTGDNINTARSIA KCGI KP +D
Sbjct: 651 VNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINTARSIALKCGIFKPNED 710
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FLILEGKEFNRR+RDANG+VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK S SRE
Sbjct: 711 FLILEGKEFNRRIRDANGEVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKASVSRE 770
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 771 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 830
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SIAKFLQFQLTVN+VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT D
Sbjct: 831 SIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTSD 890
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRG-AEFGSEPT 416
LLLRKPYGRTKPLIS+TMMKNILGQA+YQL+V+F LLFVGDK+LDI TGRG A+ G PT
Sbjct: 891 LLLRKPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKMLDIETGRGVAQTGGGPT 950
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFT+IFNTFV MTLFNE NARKIHGQRNVF+G F+NPIFYSIW +T +QV IIQ+G+
Sbjct: 951 QHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQGIFTNPIFYSIWIMTCLAQVIIIQYGKM 1010
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTLEQW+WCLFFG+GTLLWGQV+TT+PTRK+PKILSWGRG P++ AI LG+E
Sbjct: 1011 AFSTKALTLEQWMWCLFFGVGTLLWGQVITTIPTRKIPKILSWGRGQPDDIG-AINLGDE 1069
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQV 565
KFDPD+DKKPRAGQILWIRGLTRLQTQV
Sbjct: 1070 -KFDPDSDKKPRAGQILWIRGLTRLQTQV 1097
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 591 | ||||||
| FB|FBgn0259214 | 1255 | PMCA "plasma membrane calcium | 0.947 | 0.446 | 0.812 | 8.1e-250 | |
| WB|WBGene00003153 | 1234 | mca-3 [Caenorhabditis elegans | 0.942 | 0.451 | 0.661 | 2.9e-199 | |
| ZFIN|ZDB-GENE-040718-174 | 1248 | atp2b3a "ATPase, Ca++ transpor | 0.962 | 0.455 | 0.638 | 4.6e-192 | |
| UNIPROTKB|F1MS16 | 1206 | ATP2B3 "Uncharacterized protei | 0.961 | 0.470 | 0.641 | 5.9e-192 | |
| ZFIN|ZDB-GENE-061027-60 | 1174 | atp2b4 "ATPase, Ca++ transport | 0.961 | 0.483 | 0.628 | 9.5e-192 | |
| UNIPROTKB|Q16720 | 1220 | ATP2B3 "Plasma membrane calciu | 0.961 | 0.465 | 0.639 | 1.6e-191 | |
| UNIPROTKB|K7GQP7 | 1158 | LOC100520061 "Uncharacterized | 0.957 | 0.488 | 0.639 | 2e-191 | |
| UNIPROTKB|K7GRJ7 | 1206 | LOC100520061 "Uncharacterized | 0.957 | 0.469 | 0.639 | 2e-191 | |
| UNIPROTKB|E2R4W3 | 1258 | ATP2B3 "Uncharacterized protei | 0.964 | 0.453 | 0.636 | 5.3e-191 | |
| UNIPROTKB|F1S2B3 | 1258 | LOC100520061 "Uncharacterized | 0.927 | 0.435 | 0.652 | 5.3e-191 |
| FB|FBgn0259214 PMCA "plasma membrane calcium ATPase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2406 (852.0 bits), Expect = 8.1e-250, P = 8.1e-250
Identities = 463/570 (81%), Positives = 511/570 (89%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLPTK----VLPRSCAFIYGRD 56
+RD+I E+ F ++ R M TVIPR GGYR L TK ++ + CAFIYG +
Sbjct: 547 IRDEITEDKFTRVYTF--NSVRKSMG-TVIPRPNGGYR-LYTKGASEIIMKKCAFIYGHE 602
Query: 57 GNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEY 116
G LEKFTR+MQ+RL+R VIEPMACDGLRTIS+AYRDFVPGKA IN+VHID EPNWDDEE
Sbjct: 603 GTLEKFTRDMQERLIREVIEPMACDGLRTISVAYRDFVPGKAAINEVHIDGEPNWDDEEN 662
Query: 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD 176
I+ NLT LCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIA+KCGIL+P D
Sbjct: 663 IMTNLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIASKCGILRPND 722
Query: 177 DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSR 236
DFLILEGKEFNRR+RD+NGD+QQHL+DKVWP+LRVLARSSPTDKYTLVKGIIDS VS++R
Sbjct: 723 DFLILEGKEFNRRIRDSNGDIQQHLIDKVWPKLRVLARSSPTDKYTLVKGIIDSTVSENR 782
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 296
EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY
Sbjct: 783 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 842
Query: 297 DSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTP 356
DSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATE PTP
Sbjct: 843 DSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEFPTP 902
Query: 357 DLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPT 416
DLLLRKPYGRTKPLIS+TMMKNILGQA+YQL ++F LLFVGD +LDI +GRG E + PT
Sbjct: 903 DLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFVGDVILDIESGRGQELNAGPT 962
Query: 417 QHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
QHFT+IFNTFV MTLFNEINARKIHGQRNV EG +NPIFY+IW T SQV IIQ+G+
Sbjct: 963 QHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTMISQVLIIQYGKM 1022
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGEE 536
AFSTK+LTL+QWLWC+FFGIGTL+WGQ++T+VPTRKLPKILSWGRGHPEEYT+ + LGEE
Sbjct: 1023 AFSTKALTLDQWLWCIFFGIGTLVWGQLITSVPTRKLPKILSWGRGHPEEYTDGMNLGEE 1082
Query: 537 HKFDP-DADKKPRAGQILWIRGLTRLQTQV 565
+FD D+DKKPRAGQILWIRGLTRLQTQ+
Sbjct: 1083 -RFDSIDSDKKPRAGQILWIRGLTRLQTQL 1111
|
|
| WB|WBGene00003153 mca-3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1929 (684.1 bits), Expect = 2.9e-199, P = 2.9e-199
Identities = 377/570 (66%), Positives = 455/570 (79%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+RD PEE P + + ++ R M TVI GGYR ++++ + C + G++G
Sbjct: 520 IRDRHPEETI-PKV-YTFNSVRKSMS-TVINLPDGGYRVFSKGASEIVTKRCKYFLGKNG 576
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPG--KAEINQVHIDTEPNWDDEE 115
L KF+ + + LVR+VIEPMA DGLRTI +AY+D+VP K NQ+ +EP+W++EE
Sbjct: 577 TLTKFSSKDAENLVRDVIEPMASDGLRTICVAYKDYVPSSKKTADNQIAYSSEPDWENEE 636
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
IV ++T + V+GI+DPVRPEVP AI +CQ AGITVRMVTGDNINTARSIAT CGILKPG
Sbjct: 637 MIVGDMTAIAVLGIQDPVRPEVPAAITRCQEAGITVRMVTGDNINTARSIATACGILKPG 696
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DF+ LEGKEFN R+RD NG+V Q LD +WP+LRVLAR+ P+DKY LVKGIIDS+V+DS
Sbjct: 697 EDFIALEGKEFNARIRDENGEVSQEKLDLIWPKLRVLARAQPSDKYVLVKGIIDSRVTDS 756
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 757 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 816
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSIAKFLQFQLTVNVVAV+VAF+GACA+QD+PLKAVQMLWVNLIMDTLASLALATEMPT
Sbjct: 817 YDSIAKFLQFQLTVNVVAVVVAFVGACAIQDTPLKAVQMLWVNLIMDTLASLALATEMPT 876
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
+LL RKPYGRT PLIS+TM KNILG A+YQL ++FTL+F G+ +IP+GR A S P
Sbjct: 877 EELLKRKPYGRTSPLISRTMCKNILGHAVYQLVILFTLIFYGEVCFNIPSGRWAPLHSPP 936
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++HFT++FNTFV MTLFNEINARKIHG+RN+F+G FSNPI+Y IW T SQV IIQFG
Sbjct: 937 SKHFTIVFNTFVMMTLFNEINARKIHGERNIFKGLFSNPIYYVIWIATMISQVVIIQFGG 996
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYTEAIQLGE 535
FST +L +WLWCL FG+GTLLWGQ+VT++PT LP ++ G G E T L
Sbjct: 997 RWFSTSALNTTEWLWCLAFGVGTLLWGQIVTSIPTGSLPANMTIGSG--EAPTND-PLMP 1053
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQV 565
+++ D D +K R+GQILW+RGLTRLQTQ+
Sbjct: 1054 DYE-DSDTHEK-RSGQILWVRGLTRLQTQL 1081
|
|
| ZFIN|ZDB-GENE-040718-174 atp2b3a "ATPase, Ca++ transporting, plasma membrane 3a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1861 (660.2 bits), Expect = 4.6e-192, P = 4.6e-192
Identities = 377/590 (63%), Positives = 449/590 (76%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+ IPEE F ++ R M TVI G +R +++L + C+FI RDG
Sbjct: 561 VREQIPEELLYKVYTF--NSVRKSMS-TVIQMPDGSFRLYSKGASEILLKKCSFILSRDG 617
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
F +D +V+ VIEPMACDGLRTI IAYR+ +P D P+WD+E I
Sbjct: 618 EARAFRARDKDEMVKKVIEPMACDGLRTICIAYRE-LPA---------DPLPDWDNETDI 667
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V+NLT + VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR+IA KCGI+ PGDD
Sbjct: 668 VSNLTCITVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIHPGDD 727
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL +EGK+FNRR+R+ G+++Q +DK+WP+LRVLARSSPTDK+TLVKGIIDS V + R+
Sbjct: 728 FLCMEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTVVEQRQ 787
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD
Sbjct: 788 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 847
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 848 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTEA 907
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR PLIS+TMMKNILG A+YQL ++FTLLF G+++ DI +GR A S P++
Sbjct: 908 LLLRKPYGRNNPLISRTMMKNILGHAVYQLVIIFTLLFAGERIFDIDSGRDAPLHSPPSE 967
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFNTFV M LFNEINARKIHG+RNVF+G FSNPIF SI T A Q+ I+QFG +
Sbjct: 968 HYTIIFNTFVLMQLFNEINARKIHGERNVFDGIFSNPIFCSIVLGTFAIQIVIVQFGGKP 1027
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYTEAIQLGEE 536
FS L +EQWLWCLF G+G LLWGQ++++VPT +L + G G P+E + +E
Sbjct: 1028 FSCSPLNVEQWLWCLFVGMGELLWGQLISSVPTHQLKCLKEAGHGPAPDEMLDEDLAEDE 1087
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE-VKRRES 585
+ D A+++ R GQILW RGL R+QTQ+ VV Y+ ++R ES
Sbjct: 1088 EEIDY-AERELRRGQILWFRGLNRIQTQIR--VVKAFRSSLYDGIERPES 1134
|
|
| UNIPROTKB|F1MS16 ATP2B3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1860 (659.8 bits), Expect = 5.9e-192, P = 5.9e-192
Identities = 379/591 (64%), Positives = 448/591 (75%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+ IPE+ F ++ R M TVI GG+R +++L + C I +G
Sbjct: 547 VREQIPEDKLYKVYTF--NSVRKSMS-TVIRTPDGGFRLFSKGASEILLKKCTNILNSNG 603
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
L F +D +V+ +IEPMACDGLRTI IAYRDF + EP+WD+E +
Sbjct: 604 ELRSFRPRDRDDMVKKIIEPMACDGLRTICIAYRDFTAAQ----------EPDWDNENEV 653
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG+D
Sbjct: 654 VGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGED 713
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS + R+
Sbjct: 714 FLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSNTGEQRQ 773
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 774 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 833
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 834 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 893
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVG+ DI +GR A S P++
Sbjct: 894 LLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSE 953
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFNTFV M LFNEINARKIHG+RNVF G FSNPIF +I T A Q+ I+QFG +
Sbjct: 954 HYTIIFNTFVMMQLFNEINARKIHGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGGKP 1013
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYT-EAIQLGE 535
FS L+ EQWLWCLF GIG L+WGQV+ T+PT +L + G G +E T E + GE
Sbjct: 1014 FSCSPLSTEQWLWCLFVGIGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGE 1073
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE-VKRRES 585
E + D A+++ R GQILW RGL R+QTQ+ VV YE +++ ES
Sbjct: 1074 E-EID-HAERELRRGQILWFRGLNRIQTQIR--VVKAFRSSLYEGLEKPES 1120
|
|
| ZFIN|ZDB-GENE-061027-60 atp2b4 "ATPase, Ca++ transporting, plasma membrane 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1858 (659.1 bits), Expect = 9.5e-192, P = 9.5e-192
Identities = 371/590 (62%), Positives = 450/590 (76%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+RD++PEE F +++R M + G G+R ++++ R C+ I G
Sbjct: 558 IRDEVPEEKLYKVYTF--NSSRKSMSTVIKNSSGPGFRMYSKGASEIVLRKCSHILDASG 615
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
F + +D +V+ VIEPMACDGLRTI +A RDF TEP+WD+E I
Sbjct: 616 QQRVFKAKDRDEMVQKVIEPMACDGLRTICVAMRDF------------STEPDWDNEADI 663
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
+N+LT +CVVGIEDPVRPEVP+AI KCQRAGITVRMVTGDNINTAR+IATKCGIL+PG+D
Sbjct: 664 LNDLTCICVVGIEDPVRPEVPEAISKCQRAGITVRMVTGDNINTARAIATKCGILQPGED 723
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGK+FN+++R+ G+V+Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS V ++R+
Sbjct: 724 FLCLEGKDFNQQIRNDKGEVEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTVGETRQ 783
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 784 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 843
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDTLASLALATE PT
Sbjct: 844 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTES 903
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR KPLIS+TMMKNILG AIYQL + FTLLF G+K +I +GR A S+P++
Sbjct: 904 LLLRKPYGRDKPLISRTMMKNILGHAIYQLVITFTLLFAGEKFFNIDSGRSALLHSQPSE 963
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFN FV M LFNEINARKIHG+RNVFEG + NPIF S+ T A Q+ I+QFG +
Sbjct: 964 HYTIIFNVFVMMQLFNEINARKIHGERNVFEGIYRNPIFCSVVLGTFALQIIIVQFGGKP 1023
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHP-EEYTEAIQLGEE 536
FS +LT++QWLWC+F G+G LLWGQ++T +PT +L + G G P E+ E + +
Sbjct: 1024 FSCTALTIDQWLWCIFIGVGELLWGQLITAIPTHRLKFLKEAGHGIPKEDIAEEVLIEGA 1083
Query: 537 HKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE-VKRRES 585
+ D A+ + R GQILW RGL R+QTQ+ VV+ YE +++ ES
Sbjct: 1084 DEID-HAEMELRRGQILWFRGLNRIQTQIK--VVNAFRSSLYEGLEKPES 1130
|
|
| UNIPROTKB|Q16720 ATP2B3 "Plasma membrane calcium-transporting ATPase 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1856 (658.4 bits), Expect = 1.6e-191, P = 1.6e-191
Identities = 378/591 (63%), Positives = 448/591 (75%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+ IPE+ F ++ R M TVI GG+R +++L + C I +G
Sbjct: 561 VREQIPEDKLYKVYTF--NSVRKSMS-TVIRMPDGGFRLFSKGASEILLKKCTNILNSNG 617
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
L F +D +VR +IEPMACDGLRTI IAYRDF G+ EP+WD+E +
Sbjct: 618 ELRGFRPRDRDDMVRKIIEPMACDGLRTICIAYRDFSAGQ----------EPDWDNENEV 667
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG+D
Sbjct: 668 VGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGED 727
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS + R+
Sbjct: 728 FLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQ 787
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 788 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 847
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 848 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTES 907
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR KPLIS+TMMKNILG A+YQL ++FTLLFVG+ DI +GR A S P++
Sbjct: 908 LLLRKPYGRDKPLISRTMMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSE 967
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFNTFV M LFNEINARKIHG+RNVF+G FSNPIF +I T Q+ I+QFG +
Sbjct: 968 HYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKP 1027
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYT-EAIQLGE 535
FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T E + GE
Sbjct: 1028 FSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGE 1087
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE-VKRRES 585
E + D A+++ R GQILW RGL R+QTQ+ VV YE +++ ES
Sbjct: 1088 E-EID-HAERELRRGQILWFRGLNRIQTQIR--VVKAFRSSLYEGLEKPES 1134
|
|
| UNIPROTKB|K7GQP7 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1855 (658.1 bits), Expect = 2.0e-191, P = 2.0e-191
Identities = 379/593 (63%), Positives = 450/593 (75%)
Query: 1 MRDDIPEENADPGLH--FQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGR 55
+R+ IPE+ LH + ++ R M TVI GG+R +++L + C I
Sbjct: 561 VREQIPEDK----LHKVYTFNSVRKSMS-TVIRTPDGGFRLFSKGASEILLKKCTHILNS 615
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
+G L F +D +V+ VIEPMACDGLRTI IA+RDF + EP+WD+E
Sbjct: 616 NGELRGFRPRDRDDMVKKVIEPMACDGLRTICIAFRDFAAMQ----------EPDWDNEN 665
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
+V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG
Sbjct: 666 EVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPG 725
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DFL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS +
Sbjct: 726 EDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTSGEQ 785
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
R+VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 786 RQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 845
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 846 YDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPT 905
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
LLLRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVGD DI +GR A + P
Sbjct: 906 ESLLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGDLFFDIDSGRNAPLHAPP 965
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++H+T+IFNTFV M LFNEINARKIHG+RNVF G FSNPIF +I T A Q+ I+QFG
Sbjct: 966 SEHYTIIFNTFVMMQLFNEINARKIHGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGG 1025
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYT-EAIQL 533
+ FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T E +
Sbjct: 1026 KPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAE 1085
Query: 534 GEEHKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE-VKRRES 585
GEE + D A+++ R GQILW RGL R+QTQ+ VV YE +++ ES
Sbjct: 1086 GEE-EID-HAERELRRGQILWFRGLNRIQTQIR--VVKAFRSSLYEGLEKPES 1134
|
|
| UNIPROTKB|K7GRJ7 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1855 (658.1 bits), Expect = 2.0e-191, P = 2.0e-191
Identities = 379/593 (63%), Positives = 450/593 (75%)
Query: 1 MRDDIPEENADPGLH--FQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGR 55
+R+ IPE+ LH + ++ R M TVI GG+R +++L + C I
Sbjct: 547 VREQIPEDK----LHKVYTFNSVRKSMS-TVIRTPDGGFRLFSKGASEILLKKCTHILNS 601
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
+G L F +D +V+ VIEPMACDGLRTI IA+RDF + EP+WD+E
Sbjct: 602 NGELRGFRPRDRDDMVKKVIEPMACDGLRTICIAFRDFAAMQ----------EPDWDNEN 651
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
+V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG
Sbjct: 652 EVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPG 711
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DFL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS +
Sbjct: 712 EDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTSGEQ 771
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
R+VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 772 RQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 831
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 832 YDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPT 891
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
LLLRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVGD DI +GR A + P
Sbjct: 892 ESLLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGDLFFDIDSGRNAPLHAPP 951
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++H+T+IFNTFV M LFNEINARKIHG+RNVF G FSNPIF +I T A Q+ I+QFG
Sbjct: 952 SEHYTIIFNTFVMMQLFNEINARKIHGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGG 1011
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYT-EAIQL 533
+ FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T E +
Sbjct: 1012 KPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAE 1071
Query: 534 GEEHKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLCYE-VKRRES 585
GEE + D A+++ R GQILW RGL R+QTQ+ VV YE +++ ES
Sbjct: 1072 GEE-EID-HAERELRRGQILWFRGLNRIQTQIR--VVKAFRSSLYEGLEKPES 1120
|
|
| UNIPROTKB|E2R4W3 ATP2B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1851 (656.6 bits), Expect = 5.3e-191, P = 5.3e-191
Identities = 379/595 (63%), Positives = 450/595 (75%)
Query: 1 MRDDIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDG 57
+R+ IPE+ F ++ R M TVI GG+R +++L + C+ I G
Sbjct: 561 VREQIPEDKLYKVYTF--NSVRKSMS-TVIRMPDGGFRLFSKGASEILLKKCSNILNSHG 617
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
L F +D +V+ +IEPMACDGLRTI IAYRDF + EP+WD+E +
Sbjct: 618 ELRGFRPRDRDDMVKKIIEPMACDGLRTICIAYRDFAAAQ----------EPDWDNENEV 667
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG+D
Sbjct: 668 VGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGED 727
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
FL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS + R+
Sbjct: 728 FLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSNTGEQRQ 787
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNVYD
Sbjct: 788 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYD 847
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
SI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 848 SISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTEA 907
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
LLLRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVG+ DI +GR A S P++
Sbjct: 908 LLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSE 967
Query: 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREA 477
H+T+IFNTFV M LFNEINARKIHG+RNVF G FSNPIF +I T A Q+ I+QFG +
Sbjct: 968 HYTIIFNTFVMMQLFNEINARKIHGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGGKP 1027
Query: 478 FSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYT-EAIQLGE 535
FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T E + GE
Sbjct: 1028 FSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGE 1087
Query: 536 EHKFDPDADKKPRAGQILWIRGLTRLQTQVSQPVVDPHLQLC-YE--VKRRESTL 587
E + D A+++ R GQILW RGL R+QTQ+ VV + ++ V+RR S L
Sbjct: 1088 E-EID-HAERELRRGQILWFRGLNRIQTQME--VVSTFKRSASFQGAVRRRSSVL 1138
|
|
| UNIPROTKB|F1S2B3 LOC100520061 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1851 (656.6 bits), Expect = 5.3e-191, P = 5.3e-191
Identities = 373/572 (65%), Positives = 441/572 (77%)
Query: 1 MRDDIPEENADPGLH--FQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGR 55
+R+ IPE+ LH + ++ R M TVI GG+R +++L + C I
Sbjct: 561 VREQIPEDK----LHKVYTFNSVRKSMS-TVIRTPDGGFRLFSKGASEILLKKCTHILNS 615
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
+G L F +D +V+ VIEPMACDGLRTI IA+RDF + EP+WD+E
Sbjct: 616 NGELRGFRPRDRDDMVKKVIEPMACDGLRTICIAFRDFAAMQ----------EPDWDNEN 665
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
+V +LT + VVGIEDPVRPEVP+AIRKCQRAGITVRMVTGDNINTAR+IA KCGI++PG
Sbjct: 666 EVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPG 725
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+DFL LEGKEFNRR+R+ G+++Q LDKVWP+LRVLARSSPTDK+TLVKGIIDS +
Sbjct: 726 EDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTSGEQ 785
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 295
R+VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF+SIVKAVMWGRNV
Sbjct: 786 RQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNV 845
Query: 296 YDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPT 355
YDSI+KFLQFQLTVNVVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT
Sbjct: 846 YDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPT 905
Query: 356 PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415
LLLRKPYGR KPLIS+TMMKNILG A+YQLT++FTLLFVGD DI +GR A + P
Sbjct: 906 ESLLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGDLFFDIDSGRNAPLHAPP 965
Query: 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGR 475
++H+T+IFNTFV M LFNEINARKIHG+RNVF G FSNPIF +I T A Q+ I+QFG
Sbjct: 966 SEHYTIIFNTFVMMQLFNEINARKIHGERNVFHGIFSNPIFCTIVLGTFAIQIVIVQFGG 1025
Query: 476 EAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGH-PEEYT-EAIQL 533
+ FS L+ EQWLWCLF G+G L+WGQV+ T+PT +L + G G +E T E +
Sbjct: 1026 KPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAE 1085
Query: 534 GEEHKFDPDADKKPRAGQILWIRGLTRLQTQV 565
GEE + D A+++ R GQILW RGL R+QTQ+
Sbjct: 1086 GEE-EID-HAERELRRGQILWFRGLNRIQTQM 1115
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q64568 | AT2B3_RAT | 3, ., 6, ., 3, ., 8 | 0.6467 | 0.9323 | 0.4379 | yes | N/A |
| Q16720 | AT2B3_HUMAN | 3, ., 6, ., 3, ., 8 | 0.6485 | 0.9323 | 0.4516 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 591 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-108 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-72 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-65 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-56 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 6e-56 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 9e-49 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-47 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-32 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-29 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-26 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-23 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-22 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 4e-22 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 6e-19 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 8e-19 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 1e-18 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-17 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-16 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 7e-16 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 6e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-12 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 6e-07 | |
| pfam12424 | 67 | pfam12424, ATP_Ca_trans_C, Plasma membrane calcium | 5e-06 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 7e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 2e-04 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-04 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 6e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.002 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 636 bits (1643), Expect = 0.0
Identities = 260/499 (52%), Positives = 328/499 (65%), Gaps = 35/499 (7%)
Query: 16 FQLSAARALMKVTVIPRKGGGYRSL---PTKVLPRSCAFIYGRDGNLEKFTREMQDRLVR 72
+ ++ R M V V+ GG YR ++++ + C +G + + +DR
Sbjct: 478 YPFNSERKFMSV-VVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDR-CA 535
Query: 73 NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDP 132
+VIEP+A D LRTI +AYRDF P + P D LT + VVGI+DP
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEE----------FPRKDYPN---KGLTLIGVVGIKDP 582
Query: 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRD 192
+RP V +A+++CQRAGITVRMVTGDNI+TA++IA CGIL G L +EGKEF V
Sbjct: 583 LRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG--GLAMEGKEFRSLV-- 638
Query: 193 ANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPAL 252
+D + P+LRVLARSSP DK LV + D EVVAVTGDGTND PAL
Sbjct: 639 ------YEEMDPILPKLRVLARSSPLDKQLLVLM-----LKDMGEVVAVTGDGTNDAPAL 687
Query: 253 KKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 312
K ADVGF+MGI+GT+VAKEASDIIL DDNF+SIV+AV WGRNVYD+I KFLQFQLTVNVV
Sbjct: 688 KLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVV 747
Query: 313 AVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLIS 372
AVI+ F+G+C SPL AVQ+LWVNLIMDTLA+LALATE PT LL RKP GR PLIS
Sbjct: 748 AVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLIS 807
Query: 373 KTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLF 432
++M KNILGQA YQL V F LLF G + D+ + T++FNTFV + LF
Sbjct: 808 RSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQ-QGELNTIVFNTFVLLQLF 866
Query: 433 NEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKSLTLEQWLWCL 492
NEINARK++ +RNVFEG F N IF +I T QV I++FG FST SL++EQW+ C+
Sbjct: 867 NEINARKLY-ERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCV 925
Query: 493 FFGIGTLLWGQVVTTVPTR 511
G+ +L++G ++ +P
Sbjct: 926 LLGMLSLIFGVLLRLIPVE 944
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 347 bits (891), Expect = e-108
Identities = 152/466 (32%), Positives = 228/466 (48%), Gaps = 40/466 (8%)
Query: 41 PTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEI 100
P +L R G LE T E L V E +A +GLR +++AY+
Sbjct: 474 PEVILERCK-----SIGELEPLTEEGLRTLEEAVKE-LASEGLRVLAVAYKK-------- 519
Query: 101 NQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160
+D D+ + I ++L L + GIEDP R +V +AI + + AGI V M+TGD++
Sbjct: 520 ----LDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVE 575
Query: 161 TARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDK 220
TA +IA +CGI + L+++G E + + + L++++ V AR SP K
Sbjct: 576 TAIAIAKECGIEAEAESALVIDGAELDA----LSDEELAELVEEL----SVFARVSPEQK 627
Query: 221 YTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDD 280
+V+ + S VVA+TGDG ND PALK ADVG AMG GTD AKEA+DI+L DD
Sbjct: 628 ARIVE-----ALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDD 682
Query: 281 NFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACA-VQDSPLKAVQMLWVNL 339
NF++IV AV+ GR VY +I KF+ + L+ NV V+ I + + PL +Q+LW+NL
Sbjct: 683 NFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINL 742
Query: 340 IMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDK 399
+ D+L +LAL E P D++ R P G + L ++ + + ++F L F+
Sbjct: 743 LTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYL 802
Query: 400 LLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYS 458
L I G + Q T F V + L + R R FSN +
Sbjct: 803 LGFIANTLGLDLFQALLQ--TTAFTVLVLIQLLLTLAVRSRG--RPFLSSLLFSNKYLWL 858
Query: 459 IWFITAASQVFIIQFG---REAFSTKSLTLEQWLWCLFFGIGTLLW 501
+ Q+ II + F L+L +WL + + L
Sbjct: 859 ALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYI 904
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 5e-72
Identities = 158/487 (32%), Positives = 242/487 (49%), Gaps = 73/487 (14%)
Query: 19 SAARALMKVTVIPR---------KGGGYRSLPTKVLPRSCAFIYGRDGNLEKFTREMQDR 69
S+ R M V + R KG + L C + +DG T++ +D
Sbjct: 437 SSERKWMAVKCVHRQDRSEMCFMKGAYEQVLK------YCTYYQKKDGKTLTLTQQQRDV 490
Query: 70 LVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGI 129
+ E MA GLR I+ A P K LT L +VGI
Sbjct: 491 IQEEAAE-MASAGLRVIAFASG---PEK---------------------GQLTFLGLVGI 525
Query: 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI-LKPGDDFLILEGKEFNR 188
DP RP V +A+ G+ + M+TGD+ TA SIA + G+ K + G++
Sbjct: 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQS---VSGEKL-- 580
Query: 189 RVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND 248
D QQ L ++ P++ V AR+SP K +VK + K D VVA+TGDG ND
Sbjct: 581 ----DAMDDQQ--LSQIVPKVAVFARASPEHKMKIVKAL--QKRGD---VVAMTGDGVND 629
Query: 249 GPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLT 308
PALK AD+G AMG GTDVAKEA+D+ILTDD+F++I+ A+ G+ ++++I F+ FQL+
Sbjct: 630 APALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLS 689
Query: 309 VNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTK 368
+V A+ + + +PL A+Q+LW+N++MD + +L E D++ + P R
Sbjct: 690 TSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRND 749
Query: 369 PLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVF 428
+++K ++K IL AI + VV TL ++ D G + T+ F FVF
Sbjct: 750 KILTKDLIKKILVSAI--IIVVGTLFVFVREMQD---------GVITARDTTMTFTCFVF 798
Query: 429 MTLFNEINARKIHGQRNVFE-GFFSNPIF-YSIWF-ITAASQVFIIQFGREAFSTKSLTL 485
+FN + R ++VFE GFFSN +F Y++ I V + F T++L++
Sbjct: 799 FDMFNALACR--SQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSI 856
Query: 486 EQWLWCL 492
+ L+ L
Sbjct: 857 KDLLFLL 863
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 230 bits (588), Expect = 1e-65
Identities = 148/471 (31%), Positives = 223/471 (47%), Gaps = 49/471 (10%)
Query: 41 PTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEI 100
P VL R C I DG T +M++ ++ + E LR +++A++D + E
Sbjct: 453 PEGVLER-CTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED 511
Query: 101 NQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160
+ N++ E ++LT + VVG+ DP RPEV DAI KC+ AGI V M+TGDN
Sbjct: 512 ---LLSDPANFEAIE---SDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKE 565
Query: 161 TARSIATKCGILKPGDD--FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPT 218
TA +I + GI P +D F G+EF D G +Q + +R P+
Sbjct: 566 TAEAICRRIGIFSPDEDVTFKSFTGREF-----DEMGPAKQR---AACRSAVLFSRVEPS 617
Query: 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278
K LV+ + + E+VA+TGDG ND PALKKAD+G AMG +GT+VAKEASD++L
Sbjct: 618 HKSELVE-----LLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLA 671
Query: 279 DDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVN 338
DDNF++IV AV GR +Y+++ +F+++ ++ N+ V+ F+ A L VQ+LWVN
Sbjct: 672 DDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVN 731
Query: 339 LIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIY-QLTVVFTLLF-- 395
L+ D L + AL P D++ + P +PLI+ + L +Y L V ++
Sbjct: 732 LVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWY 791
Query: 396 --------VGDKLLDIPTGRG--AEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRN 445
D P T+ + V + +FN +NA
Sbjct: 792 LLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQS-- 849
Query: 446 VFEGFFSNPIFYSIWFITAASQVFIIQFG-------REAFSTKSLTLEQWL 489
P + + W I A + F F L+L WL
Sbjct: 850 ----LLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWL 896
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 3e-56
Identities = 144/496 (29%), Positives = 222/496 (44%), Gaps = 64/496 (12%)
Query: 49 CAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTE 108
C+ G+DG + L+ +E +A +GLR ++ A + F +Q+ +T
Sbjct: 567 CSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETL 626
Query: 109 PNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK 168
E ++L L ++GI DP R E A+ KC +AGI V M+TGD TA++IA +
Sbjct: 627 NRATAE----SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE 682
Query: 169 CGILKPG--------DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDK 220
GI+ P D +++ G +F DA D + L K V+AR +P K
Sbjct: 683 VGIIPPNFIHDRDEIMDSMVMTGSQF-----DALSDEEVDDL-KALCL--VIARCAPQTK 734
Query: 221 YTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDD 280
+++ + K A+TGDG ND P+LK A+VG AMGI G+DVAK+ASDI+L+DD
Sbjct: 735 VKMIEALHRRK-----AFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDD 789
Query: 281 NFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDS------PLKAVQM 334
NF+SI+ A+ GR ++D+I KF+ L NV I+ IG A +D PL V++
Sbjct: 790 NFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIG-LAFRDENGKSVFPLSPVEI 848
Query: 335 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLL 394
LW +I ++ L E PDL+ R P+ + K ++ ++ + L
Sbjct: 849 LWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFF-LGGSCLAS 907
Query: 395 FVGDKLLDIPTGR-----GAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEG 449
F G L +G A + + F F MT I A ++ N F
Sbjct: 908 FTG-ILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFN 966
Query: 450 FFSNP--------IFYSIW------------FITAASQVFIIQFGREAFSTKSLTLEQW- 488
P F+SI ++A ++I + F K + E W
Sbjct: 967 LHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGAE-WG 1025
Query: 489 ---LWCLFFGIGTLLW 501
+ F G +W
Sbjct: 1026 LAAAATIAFFFGAEIW 1041
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 6e-56
Identities = 87/314 (27%), Positives = 134/314 (42%), Gaps = 93/314 (29%)
Query: 42 TKVLPRSCAFIYGRDGNLEKFT----REMQDRL--VRNVIEPMACDGLRTISIAYRDFVP 95
+ VL R + DG+ F + +R +A GLR ++ A ++
Sbjct: 317 SSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYEEKYLELARQGLRVLAFASKELED 376
Query: 96 GKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVT 155
+L L ++ EDP+RP+ + I + + AGI V M+T
Sbjct: 377 ------------------------DLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMIT 412
Query: 156 GDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARS 215
GDN+ TA++IA + GI V AR
Sbjct: 413 GDNVLTAKAIAKELGID--------------------------------------VFARV 434
Query: 216 SPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 275
SP K +V+ + +VA+TGDG ND PALKKADVG AMG AK A+DI
Sbjct: 435 SPEQKLQIVEALQKKG-----HIVAMTGDGVNDAPALKKADVGIAMG------AKAAADI 483
Query: 276 ILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQML 335
+L DD+ S+IVKAV GR ++ +I + + + N++ + +A +
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV------------- 530
Query: 336 WVNLIMDTLASLAL 349
+ L++ LA+LAL
Sbjct: 531 -IILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 9e-49
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 327 SPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQ 386
PL +Q+LW+NL+ D L +LAL E P PDL+ R P +PL S+ +++ IL Q +
Sbjct: 2 LPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLI 61
Query: 387 LTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNV 446
V + F+G I SE T+ FNT V LFN +NAR +
Sbjct: 62 AIVTLLVFFLGLLGFGI---------SESGLAQTMAFNTLVLSQLFNALNARSLRRSLFK 112
Query: 447 FEGFFSNPIFYSIWFITAASQVFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQV 504
G FSN + ++ Q+ II + F T L+LEQWL L + LL ++
Sbjct: 113 I-GLFSNKLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVEL 171
Query: 505 V 505
Sbjct: 172 R 172
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 4e-47
Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 40/304 (13%)
Query: 121 LTGLCVVGIE---DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
LC VG+ DP R VPDA+ KC+ AGI V MVTGD+ TA++IA GI+ G++
Sbjct: 554 TDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 613
Query: 178 F-------LILEGKEFNRRVRDA---NG----DVQQHLLDKVWPRLR-----VLARSSPT 218
L + + N R A +G D+ LD++ L+ V AR+SP
Sbjct: 614 TVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEI---LKYHTEIVFARTSPQ 670
Query: 219 DKYTLVKGIIDSKVSDSRE--VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 276
K +V+G R+ +VAVTGDG ND PALKKAD+G AMGIAG+DV+K+A+D+I
Sbjct: 671 QKLIIVEGC-------QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMI 723
Query: 277 LTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 336
L DDNF+SIV V GR ++D++ K + + LT N+ + I A PL + +L
Sbjct: 724 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILC 783
Query: 337 VNLIMDTLASLALATEMPTPDLLLRKPYGRTK------PLISKTMMKNILGQAIYQLTVV 390
++L D + +++LA E D++ R+P LIS + + QA+
Sbjct: 784 IDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTY 843
Query: 391 FTLL 394
F +L
Sbjct: 844 FVIL 847
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 4e-32
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 43/197 (21%)
Query: 124 LCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG 183
+ V+ + D +RP+ +AI + GI V M+TGDN TA +IA + GI D+
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI----DE------ 578
Query: 184 KEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTG 243
V A P DK +V+ ++ VA+ G
Sbjct: 579 ---------------------------VRAELLPEDKAEIVR-----ELQAEGRKVAMVG 606
Query: 244 DGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFL 303
DG ND PAL ADVG AMG +GTDVA EA+D++L D+ S++ +A+ R I + L
Sbjct: 607 DGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNL 665
Query: 304 QFQLTVNVVAVIVAFIG 320
+ N +A+ +A G
Sbjct: 666 FWAFGYNAIAIPLAAGG 682
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 1e-29
Identities = 75/246 (30%), Positives = 108/246 (43%), Gaps = 48/246 (19%)
Query: 80 CDGLRTISIAYRDFVPGKAEINQVHIDTEPNW----DDEEYIVNNLTGLCVVGIEDPVRP 135
DG + I F+ E D ++ + L V+ + D +RP
Sbjct: 328 VDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRP 387
Query: 136 EVPDAIRKCQRAG-ITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDAN 194
E +AI +RAG I + M+TGDN + A ++A + GI +
Sbjct: 388 EAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--------------------- 426
Query: 195 GDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKK 254
V A P DK +VK + + VVA+ GDG ND PAL
Sbjct: 427 ----------------VHAELLPEDKLAIVKELQEEGG-----VVAMVGDGINDAPALAA 465
Query: 255 ADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAV 314
ADVG AMG AG+DVA EA+DI+L +D+ SS+ A+ R I + L + L N+VA+
Sbjct: 466 ADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524
Query: 315 IVAFIG 320
+A G
Sbjct: 525 PLAAGG 530
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-26
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 43/193 (22%)
Query: 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGK 184
V+ + D ++PE + I+ +R GI M+TGDN TA+++A + GI
Sbjct: 407 GVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN----------- 455
Query: 185 EFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244
V A P DK L+K K+ + +VVA+ GD
Sbjct: 456 --------------------------VRAEVLPDDKAALIK-----KLQEKGKVVAMVGD 484
Query: 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQ 304
G ND PAL +ADVG A+G AGTDVA EA+D++L ++ + + A+ R I + L
Sbjct: 485 GINDAPALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLL 543
Query: 305 FQLTVNVVAVIVA 317
+ NV+A+ +A
Sbjct: 544 WAFGYNVIAIPIA 556
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-23
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 65 EMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGL 124
E + ++++ M G+R I++A + G+A+ + D+E+ I+
Sbjct: 461 ESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKT--------DEEQLIIEGF--- 509
Query: 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLI---- 180
+G DP + +AI + GI V+++TGDN I + GI +DFL+
Sbjct: 510 --LGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI--DANDFLLGADI 565
Query: 181 --LEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREV 238
L +E R +R + + AR +P K ++ + +
Sbjct: 566 EELSDEELARELR----------------KYHIFARLTPMQKSRIIGLL-----KKAGHT 604
Query: 239 VAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDS 298
V GDG ND PAL+KADVG ++ A D+AKEASDIIL + + + + V+ GRN + +
Sbjct: 605 VGFLGDGINDAPALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGN 663
Query: 299 IAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMD 342
I K+L+ + N V + + + P+ ++ +L NL+ D
Sbjct: 664 ILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 43/196 (21%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGIT-VRMVTGDNINTARSIATKCGILKPGDDFLILEGK 184
+ + D RP+ +AI + + GI V M+TGD A +A + GI D+
Sbjct: 356 YILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI----DE------- 404
Query: 185 EFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244
V A P DK +VK + + VA+ GD
Sbjct: 405 --------------------------VHAELLPEDKLEIVKELREKY-----GPVAMVGD 433
Query: 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQ 304
G ND PAL ADVG AMG +G+DVA E +D++L +D+ S + +A+ R + + +
Sbjct: 434 GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVV 493
Query: 305 FQLTVNVVAVIVAFIG 320
L + ++ +++A G
Sbjct: 494 IALGIILLLILLALFG 509
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 4e-22
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 34/208 (16%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI---LKPGDDFLILE 182
++ + DP R + + I + + G+ V+MVTGD++ A+ A + G+ + D L +
Sbjct: 436 LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGD 495
Query: 183 GK-----EFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
+ V DA+G + V+P KY +V+ +
Sbjct: 496 NRDDLPSGLGEMVEDADGFAE------VFPE----------HKYEIVE-----ILQKRGH 534
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAG-TDVAKEASDIILTDDNFSSIVKAVMWGRNVY 296
+V +TGDG ND PALKKADVG A +AG TD A+ A+DI+LT+ S IV A++ R ++
Sbjct: 535 LVGMTGDGVNDAPALKKADVGIA--VAGATDAARSAADIVLTEPGLSVIVDAILESRKIF 592
Query: 297 DSIAKFLQFQLTVNVVAVIVAFIGACAV 324
+ ++ +++ + IV F G +
Sbjct: 593 QRMKSYVIYRIAETI--RIVFFFGLLIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 6e-19
Identities = 96/428 (22%), Positives = 162/428 (37%), Gaps = 107/428 (25%)
Query: 73 NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDP 132
V++ +G R +++AY++ K + + + + D E +NLT L + E+P
Sbjct: 605 EVLKSYTREGYRVLALAYKEL--PKLTLQKA---QDLSRDAVE---SNLTFLGFIVFENP 656
Query: 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLIL---------EG 183
++P+ + I++ +RA I M+TGDN TA +A +CGI+ P + LIL +
Sbjct: 657 LKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNP-SNTLILAEAEPPESGKP 715
Query: 184 KEFNRRVRDAN-------------------------------GDVQQHL-------LDKV 205
+ V D+ G L L ++
Sbjct: 716 NQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRL 775
Query: 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM---- 261
V AR +P K TLV+ + V + GDG ND ALK+ADVG ++
Sbjct: 776 LSHTTVFARMAPDQKETLVE-----LLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE 830
Query: 262 -GIAGTDVAKEAS-----DIILTDDNFSSIVKAVMWGR-NVYDSIAKF---LQFQLTVNV 311
+A +K AS ++I GR + S F + L
Sbjct: 831 ASVAAPFTSKLASISCVPNVIRE-------------GRCALVTSFQMFKYMALYSLIQFY 877
Query: 312 VAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLI 371
I+ IG S L Q L ++L++ +L ++ P L +P L
Sbjct: 878 SVSILYLIG------SNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSN---LF 928
Query: 372 SKTMMKNILGQAIYQLTVVFTLLFVGDKL----LDIPTGRGAEFGSEPTQHFTVIFNTFV 427
S ++ ++L Q + + L+F + P E P TV+F
Sbjct: 929 SVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKEN--FPNLLNTVLF---- 982
Query: 428 FMTLFNEI 435
F++ F +
Sbjct: 983 FVSSFQYL 990
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 8e-19
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 43/289 (14%)
Query: 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNN-LTGLCVVGIEDPVRPEVPD 139
DG R + +A R+ +PG Q D+ + ++ LT L DP +
Sbjct: 510 DGFRVLLVATRE-IPGGESRAQYSTA-----DERDLVIRGFLTFL------DPPKESAAP 557
Query: 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199
AI + G+ V+++TGDN I + G L+PG+ L G E +A D
Sbjct: 558 AIAALRENGVAVKVLTGDNPIVTAKICREVG-LEPGE---PLLGTEI-----EAMDDAA- 607
Query: 200 HLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259
L + V A+ +P K ++K + + V GDG ND PAL+ ADVG
Sbjct: 608 --LAREVEERTVFAKLTPLQKSRVLKAL-----QANGHTVGFLGDGINDAPALRDADVGI 660
Query: 260 AMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTV---NVVAVIV 316
++ +G D+AKE++DIIL + + + + V+ GR + +I K+L + NV +V+V
Sbjct: 661 SVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLV 719
Query: 317 --AFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKP 363
AFI P+ A+ +L NL+ D ++ L+L + + LRKP
Sbjct: 720 ASAFIPF-----LPMLAIHLLLQNLMYD-ISQLSLPWDKMDKE-FLRKP 761
|
Length = 903 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 1e-18
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 57/293 (19%)
Query: 75 IEPMACDGLRTISIAYRDFVPGKAEI-NQVHIDTEPNWDDE--------EYIVNNLTGLC 125
+E A +GLRT+ IAYR+ + E N+ + + D E I +L L
Sbjct: 565 LENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLG 624
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLIL---- 181
IED ++ VP+ I ++AGI + ++TGD + TA +I C +L + +++
Sbjct: 625 ATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDS 684
Query: 182 -----EGKEFNRRVRDANGDVQQHLLDK---------------VWPRLR----------- 210
+ + + + +L D + L
Sbjct: 685 LDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCK 744
Query: 211 -VLA-RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD- 267
V+ R SP+ K +V+ + K S + +A+ GDG ND +++ADVG +GI+G +
Sbjct: 745 AVICCRVSPSQKADVVRLV---KKSTGKTTLAI-GDGANDVSMIQEADVG--VGISGKEG 798
Query: 268 -VAKEASDIILTDDNFSSIVKAVMW-GRNVYDSIAKFLQFQLTVNVVAVIVAF 318
A ASD + F + K ++ GR Y I+K + + N++ I+ F
Sbjct: 799 MQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 2e-17
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 43/168 (25%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
V+ ++D V+P + + + ++ GI M+TGDN TA +IA + G+ DDF+
Sbjct: 441 VIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----DDFI------ 490
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
A ++P DK L++ + +VA+TGDG
Sbjct: 491 ---------------------------AEATPEDKLALIR-----QEQAEGRLVAMTGDG 518
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGR 293
TND PAL +ADVG AM +GT AKEA++++ D N + +++ V G+
Sbjct: 519 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 4e-16
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 35/264 (13%)
Query: 57 GNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEY 116
G + M R ++ V + + GLR +++A + + + + DE
Sbjct: 489 GEIVPLDDIMLRR-IKRVTDTLNRQGLRVVAVATKYLPAREGDYQRA---------DE-- 536
Query: 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD 176
++L + DP + A++ + +G+TV+++TGD+ A + + G+
Sbjct: 537 --SDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAG 592
Query: 177 DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSR 236
+ LI G + D L + R + AR +P K +V +
Sbjct: 593 EVLI--GSDIETLSDDE--------LANLAERTTLFARLTPMHKERIVT-----LLKREG 637
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 296
VV GDG ND PAL+ AD+G ++ D+A+EA+DIIL + + + + V+ GR +
Sbjct: 638 HVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTF 696
Query: 297 DSIAKFLQFQLTV---NVVAVIVA 317
++ K+++ + NV +V+VA
Sbjct: 697 ANMLKYIKMTASSNFGNVFSVLVA 720
|
Length = 902 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 7e-16
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 51/281 (18%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
V+ ++D V+ + + + ++ GI M+TGDN TA +IA + G+ DDF+
Sbjct: 440 VIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----DDFI------ 489
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
A ++P DK L++ + ++VA+TGDG
Sbjct: 490 ---------------------------AEATPEDKIALIR-----QEQAEGKLVAMTGDG 517
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQF 305
TND PAL +ADVG AM +GT AKEA++++ D + + +++ V G+ + + F
Sbjct: 518 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTF 576
Query: 306 QLTVNVVAVIVAFIGAC-AVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPY 364
+ N VA A I A A L+A+ ++ ++ + S + + P L+
Sbjct: 577 SIA-NDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALK 635
Query: 365 G-RTKPLISKTMM-KNILGQAIYQLTVVFTLLFVGDKLLDI 403
G +PL + ++ +N+ IY L + + F+G K++D+
Sbjct: 636 GVSYRPLTASALLRRNLW---IYGLGGLI-VPFIGIKVIDL 672
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 77.9 bits (193), Expect = 6e-15
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 45/159 (28%)
Query: 124 LCVVGIEDPVRPEVPDAIRKCQRAGI-TVRMVTGDNINTARSIATKCGILKPGDDFLILE 182
L V+ ++D V+P + + + ++ GI TV M+TGDN TA +IA + G+ DDFL
Sbjct: 437 LGVIYLKDIVKPGIKERFAELRKMGIKTV-MITGDNPLTAAAIAAEAGV----DDFL--- 488
Query: 183 GKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVT 242
A ++P DK L++ + ++ R +VA+T
Sbjct: 489 ------------------------------AEATPEDKLALIR----QEQAEGR-LVAMT 513
Query: 243 GDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281
GDGTND PAL +ADVG AM +GT AKEA +++ D N
Sbjct: 514 GDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 7e-13
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 45/153 (29%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
++ ++D +R + AI + + GI M+TGDN A +IA + GI
Sbjct: 562 LIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-------------- 607
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
D + LL P DK V + + +A+ GDG
Sbjct: 608 ----------DFRAGLL--------------PEDKVKAVTEL------NQHAPLAMVGDG 637
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278
ND PA+K A +G AMG +GTDVA E +D LT
Sbjct: 638 INDAPAMKAASIGIAMG-SGTDVALETADAALT 669
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 3e-12
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
++ I DP+R + A+++ +AG + M+TGDN TA +IA + GI
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI-------------- 689
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
D V+A P K +K ++ VA+ GDG
Sbjct: 690 -----------------D------EVIAGVLPDGKAEAIK-----RLQSQGRQVAMVGDG 721
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
ND PAL +ADVG AMG G+DVA E + I L + + A+
Sbjct: 722 INDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADAL 764
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 1e-11
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 44/212 (20%)
Query: 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD 176
++ + L V+ ++D ++ + + R+ + GI M TGDN TA +IA + G+
Sbjct: 426 VLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD---- 481
Query: 177 DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSR 236
R +A P DK +++ +
Sbjct: 482 ---------------------------------RFVAECKPEDKINVIR-----EEQAKG 503
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 296
+VA+TGDGTND PAL +A+VG AM +GT AKEA+++I D N + +++ V+ G+ +
Sbjct: 504 HIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLL 562
Query: 297 DSIAKFLQFQLTVNVVAVIVAFIGACAVQDSP 328
+ F + N +A A + A + P
Sbjct: 563 MTRGSLTTFSIA-NDIAKYFAILPAMFMAAMP 593
|
Length = 673 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 6e-07
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 31/145 (21%)
Query: 112 DDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171
V +L L ++ + DP+ P +A+++ + AGI + ++TGDN TA +IA G+
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL 133
Query: 172 LKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231
D L+ + + K P++ LA +
Sbjct: 134 ----FDALV------------SADLYGLVGVGKPDPKIFELAL---------------EE 162
Query: 232 VSDSREVVAVTGDGTNDGPALKKAD 256
+ E V + GDG ND PA K A
Sbjct: 163 LGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|152858 pfam12424, ATP_Ca_trans_C, Plasma membrane calcium transporter ATPase C terminal | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Query: 550 GQILWIRGLTRLQTQ 564
GQILWIRGLTRLQTQ
Sbjct: 1 GQILWIRGLTRLQTQ 15
|
This domain family is found in eukaryotes, and is approximately 60 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved QTQ sequence motif. This family is the C terminal of a calcium transporting ATPase located in the plasma membrane. Length = 67 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 234 DSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
EV+A GD TND L+ A +G AMG A + KE +D + T ++ + +A+
Sbjct: 204 KLEEVIAF-GDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTSNDEDGVAEAL 257
|
Length = 264 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278
K + ++ + ++ +V+A GDG ND L+ A G AMG A + K +D + T
Sbjct: 188 SKGSALQSLAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMGNA-DEELKALADYV-T 244
Query: 279 DDN 281
D N
Sbjct: 245 DSN 247
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDD-----------EEYIVNNLTGLCVVGI 129
GLRT+ + R+ +E Q H E + NNLT L I
Sbjct: 666 LGLRTLVVGMREL--NDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAI 723
Query: 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165
ED ++ VP+AI + AGI V ++TGD TA SI
Sbjct: 724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 26/153 (16%)
Query: 111 WDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG 170
D E I E + P V +A+++ + GI + + T + R +
Sbjct: 11 LDSEPGIAEIE--------ELELYPGVKEALKELKEKGIKLALATN---KSRREVLELLE 59
Query: 171 ILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP-TDKYTLVKGIID 229
L D F V +NG + + ++ P DK ++
Sbjct: 60 ELGLDDYFDP---------VITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG 110
Query: 230 SKVSDSREVVAVTGDGTNDGPALKKA-DVGFAM 261
EV+ V GD ND K A +G A+
Sbjct: 111 VDPE---EVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 234 DSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKA 288
D EV+A GDG ND L+ A +G AMG A + K A+D + +N + KA
Sbjct: 201 DLEEVIAF-GDGENDIEMLELAGLGVAMGNA-SPEVKAAADYVTGSNNEDGVAKA 253
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 591 | |||
| KOG0204|consensus | 1034 | 100.0 | ||
| KOG0202|consensus | 972 | 100.0 | ||
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0203|consensus | 1019 | 100.0 | ||
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0206|consensus | 1151 | 100.0 | ||
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0210|consensus | 1051 | 100.0 | ||
| KOG0208|consensus | 1140 | 100.0 | ||
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209|consensus | 1160 | 100.0 | ||
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205|consensus | 942 | 99.97 | ||
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 99.96 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 99.96 | |
| KOG0207|consensus | 951 | 99.94 | ||
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 99.94 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.91 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.9 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 99.9 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 99.9 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.9 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.88 | |
| KOG4383|consensus | 1354 | 99.85 | ||
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.62 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.6 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.57 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.56 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.56 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.53 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.51 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.5 | |
| PLN02887 | 580 | hydrolase family protein | 99.5 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.49 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.46 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.45 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.38 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.33 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.32 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.19 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.17 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.13 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.06 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.04 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.99 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.98 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.96 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.95 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.91 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.86 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.86 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.84 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.79 | |
| PF12424 | 66 | ATP_Ca_trans_C: Plasma membrane calcium transporte | 98.78 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.7 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.65 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.63 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.62 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.6 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.51 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.49 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.39 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.37 | |
| KOG1615|consensus | 227 | 98.36 | ||
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.34 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.29 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.29 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.27 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.27 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.26 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.2 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.2 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.18 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.17 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.16 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.11 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.98 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.96 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.95 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.95 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.88 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.86 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.84 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.79 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.75 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.73 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.71 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.7 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.67 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.64 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.64 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.6 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.6 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.6 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.56 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.4 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.38 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.29 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.23 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.19 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.18 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.17 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.12 | |
| PLN02423 | 245 | phosphomannomutase | 97.12 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.09 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.09 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.05 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.03 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.99 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.96 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.93 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.88 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.85 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.82 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.8 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.8 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.79 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.68 | |
| PLN02940 | 382 | riboflavin kinase | 96.68 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.63 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.58 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.5 | |
| PLN02811 | 220 | hydrolase | 96.48 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.41 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.4 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.39 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.35 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.33 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.3 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.3 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.28 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.94 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.92 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.88 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.84 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.76 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.75 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.74 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.67 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.65 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.53 | |
| KOG3120|consensus | 256 | 95.22 | ||
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.12 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.05 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.9 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 94.72 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 94.69 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.6 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.51 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.44 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.7 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 93.61 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 93.39 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 93.05 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 92.69 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 92.28 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.08 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 91.3 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 90.33 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 89.06 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 88.68 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 88.56 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 85.58 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 85.46 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 85.44 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 85.17 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 84.89 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 84.21 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.95 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.64 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 82.13 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 80.92 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 80.91 |
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-113 Score=915.28 Aligned_cols=493 Identities=60% Similarity=0.977 Sum_probs=465.1
Q ss_pred ccccCCcceeeccCCcccceeeeEEeeCCCCc-EEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhh
Q psy8116 5 IPEENADPGLHFQLSAARALMKVTVIPRKGGG-YRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC 80 (591)
Q Consensus 5 ~~~~~~~~v~~fpF~s~rk~msv~v~~~~~~~-~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 80 (591)
+|++++.++++| ||+||+|+ ++++.++|+ | +|+ +|+||++|+++++.+|+.+++++++++ .+++.|++||+
T Consensus 529 R~e~~v~kv~~F--NS~kK~~g-vvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~-~~~~~Ie~mA~ 603 (1034)
T KOG0204|consen 529 RPEEKVVKVYPF--NSVKKRMG-VVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK-SFKDVIEPMAS 603 (1034)
T ss_pred cchhheeEEecc--Ccccceee-EEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHH-HHHHHHHHHHH
Confidence 477887777766 99999999 777877776 7 888 999999999999999999999999888 56899999999
Q ss_pred ccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy8116 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160 (591)
Q Consensus 81 ~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ 160 (591)
+||||+|+|||++.+.+ .++++|++++..+.||+++|++||+||+||||+++|+.|++|||+|.|+||||..
T Consensus 604 ~~LRti~lAy~df~~~~--------~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~ 675 (1034)
T KOG0204|consen 604 EGLRTICLAYRDFVAGP--------DEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNIN 675 (1034)
T ss_pred hhhheeeEEeeccccCC--------CCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHH
Confidence 99999999999997752 3467788888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEE
Q psy8116 161 TARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVA 240 (591)
Q Consensus 161 ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va 240 (591)
||++||.+|||+.+++++++++|++|++ ..++..++++++++|+||++|.||+.+|+.|+ ..+++||
T Consensus 676 TAkAIA~eCGILt~~~d~~~lEG~eFr~--------~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~-----~~g~VVA 742 (1034)
T KOG0204|consen 676 TAKAIARECGILTPGGDFLALEGKEFRE--------LSQEERDKIWPKLRVLARSSPNDKHLLVKGLI-----KQGEVVA 742 (1034)
T ss_pred HHHHHHHHcccccCCCccceecchhhhh--------cCHHHHHhhhhhheeeecCCCchHHHHHHHHH-----hcCcEEE
Confidence 9999999999999999999999999985 46788899999999999999999999999964 6799999
Q ss_pred EECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy8116 241 VTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIG 320 (591)
Q Consensus 241 ~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~ 320 (591)
++|||+||+|||++||||+|||++|+|+|||+||+|++||||++|+++++|||++|+||+||+||+|+.|++++++.|.+
T Consensus 743 VTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~ 822 (1034)
T KOG0204|consen 743 VTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVS 822 (1034)
T ss_pred EecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8116 321 ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL 400 (591)
Q Consensus 321 ~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 400 (591)
+|..+.+||+++||||+|+|||++.+||||+|||++++|+|+|++|++|+|++.||+++++|++||.+++|++.|.|..+
T Consensus 823 A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~i 902 (1034)
T KOG0204|consen 823 ACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSI 902 (1034)
T ss_pred hhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccc
Q psy8116 401 LDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFST 480 (591)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~ 480 (591)
|+. ..+.++++.+++|++||+||+||+||+||+|++| ++|+|+++++|++|+.++.+++++|+++++|++.+|++
T Consensus 903 f~~----~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~-~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st 977 (1034)
T KOG0204|consen 903 FGL----NGPLHSPPSVHNTIIFNTFVFCQVFNEINARKID-ERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFST 977 (1034)
T ss_pred hcc----CCCCCCchhhheeeehhHHHHHHHHHHHhhcchh-HHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceee
Confidence 873 3455667889999999999999999999999999 78999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHhhccCccccccccCCCCCcchh
Q psy8116 481 KSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYT 528 (591)
Q Consensus 481 ~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~~~~~~~~g~~~~~~~~ 528 (591)
.+|++.+|+||++++++.++|++++|.+|.+.+|+....+.++..+..
T Consensus 978 ~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~~~~~~ 1025 (1034)
T KOG0204|consen 978 TPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGGSKFSP 1025 (1034)
T ss_pred ecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCcccccc
Confidence 999999999999999999999999999999999999988887765443
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-84 Score=695.27 Aligned_cols=482 Identities=32% Similarity=0.506 Sum_probs=408.6
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCC-CcEEEEE---echhhhhcccccccCCc-eecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKG-GGYRSLP---TKVLPRSCAFIYGRDGN-LEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~-~~~~~~~---~e~il~~c~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
..+++++++||||+||+|||.+....+ .++.+|+ +|.|+++|++++..+|. ..||++..|+.+. +...+|+++|
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il-~~~~~~g~~g 539 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL-ANVYEMGSEG 539 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH-HHHHHHhhcc
Confidence 345788999999999999954443322 2488998 99999999999887874 4999999999986 6788899999
Q ss_pred CeEEEEEEEecCC-CcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 83 LRTISIAYRDFVP-GKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 83 lR~l~~A~k~~~~-~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
||||++|+++.+. .+.+. +..+..++...|+||+|+|++|+.||+|+|++++|+.|+++||+|.|+|||+..|
T Consensus 540 LRvLalA~~~~~~~~~~~~------~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~T 613 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQ------DLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKET 613 (972)
T ss_pred ceEEEEEccCCcccChhhh------hhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 9999999998874 11100 0011123456799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCc--eEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEE
Q psy8116 162 ARSIATKCGILKPGDD--FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVV 239 (591)
Q Consensus 162 a~~ia~~~gi~~~~~~--~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~v 239 (591)
|.+||+++|+...+++ .-+++|.+++++ ..+.++.......+|+|++|.+|.++|+. +|..+++|
T Consensus 614 A~AI~r~iGi~~~~ed~~~~~~TG~efD~l--------s~~~~~~~~~~~~vFaR~~P~HK~kIVea-----Lq~~geiv 680 (972)
T KOG0202|consen 614 AEAIAREIGIFSEDEDVSSMALTGSEFDDL--------SDEELDDAVRRVLVFARAEPQHKLKIVEA-----LQSRGEVV 680 (972)
T ss_pred HHHHHHHhCCCcCCccccccccchhhhhcC--------CHHHHHHHhhcceEEEecCchhHHHHHHH-----HHhcCCEE
Confidence 9999999999876663 346789988765 44556677788899999999999999999 57789999
Q ss_pred EEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy8116 240 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFI 319 (591)
Q Consensus 240 a~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~ 319 (591)
||+|||.||+|+||+||||||||.+|+|++|+|||+|+.||||++|+.|+++||.+|+||++|+.|+++.|+..+...++
T Consensus 681 AMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l 760 (972)
T KOG0202|consen 681 AMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFL 760 (972)
T ss_pred EecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHHHHH
Q psy8116 320 GACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVV---FTLLFV 396 (591)
Q Consensus 320 ~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~---~~~~~~ 396 (591)
++.+..+.||+|+|+||+|+++|.+|+-+|+++||++++|++||++.+.++|+.+.+++++..|+|..... |...+.
T Consensus 761 ~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~ 840 (972)
T KOG0202|consen 761 TAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMY 840 (972)
T ss_pred HHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998875443 222332
Q ss_pred hhcccCCCCCCCCCCCC-------------CCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHH
Q psy8116 397 GDKLLDIPTGRGAEFGS-------------EPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFI 462 (591)
Q Consensus 397 ~~~~~~~~~~~~~~~~~-------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~ 462 (591)
+. --.+.......++. ......||.|.++|+.-+||.+|+++... .+|. ++|+|+||++++.+
T Consensus 841 ~~-~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~--slf~~~~~~N~~l~~ai~~ 917 (972)
T KOG0202|consen 841 GA-DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENK--SLFTMPPWSNRWLLWAIAL 917 (972)
T ss_pred cC-CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCc--ceEEecccccHHHHHHHHH
Confidence 21 00000000000000 11134589999999999999999997653 4554 89999999999999
Q ss_pred HHHHHHHHHh--hccccccccCCChhHHHHHHHHHHHHHHHHHHHHhhccCc
Q psy8116 463 TAASQVFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRK 512 (591)
Q Consensus 463 ~~~~~~~~v~--~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~ 512 (591)
++++++++++ +...+|++.+|++.+|+..+.+...+++.+|++|++.|+.
T Consensus 918 S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 918 SFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNY 969 (972)
T ss_pred HHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhc
Confidence 9999977654 4589999999999999999999999999999999998765
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-76 Score=688.22 Aligned_cols=469 Identities=55% Similarity=0.872 Sum_probs=413.2
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
++.++..+||+|+||+|+ ++++.++++|++|+ ||.|+++|+.+.+.+|+..++++ .++++ ++.+++|+++|+||
T Consensus 469 ~~~~~~~~pF~s~~k~ms-vv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i-~~~~~~~a~~G~Rv 545 (941)
T TIGR01517 469 EEKVVKIYPFNSERKFMS-VVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRC-ADVIEPLASDALRT 545 (941)
T ss_pred hchhccccccCCCCCeEE-EEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHH-HHHHHHHHhcCCEE
Confidence 355677899999999999 66666566788888 99999999988777888888887 66665 57889999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
+++|||+++.++. + ..+..|+||+|+|+++++||+||+++++|++|+++||+++|+|||+..||.++
T Consensus 546 l~~A~~~~~~~~~----------~---~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i 612 (941)
T TIGR01517 546 ICLAYRDFAPEEF----------P---RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 612 (941)
T ss_pred EEEEEEecCcccc----------c---cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHH
Confidence 9999999865321 1 11234789999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|++|||.+++. .+++|.++... .++.+++...+..+|||++|+||.++|+.+ |..|++|+|+|||
T Consensus 613 A~~~GI~~~~~--~vi~G~~~~~l--------~~~el~~~i~~~~Vfar~sPe~K~~iV~~l-----q~~g~vVam~GDG 677 (941)
T TIGR01517 613 ARNCGILTFGG--LAMEGKEFRRL--------VYEEMDPILPKLRVLARSSPLDKQLLVLML-----KDMGEVVAVTGDG 677 (941)
T ss_pred HHHcCCCCCCc--eEeeHHHhhhC--------CHHHHHHHhccCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCC
Confidence 99999976443 57899988654 234566777888999999999999999995 5668999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+||||+||||||||.+|+|+||++||+++.||+|+++++++.+||++|+|++++++|.+++|+..+++.+++.++..
T Consensus 678 vNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~ 757 (941)
T TIGR01517 678 TNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 757 (941)
T ss_pred CchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999988888
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPT 405 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (591)
++|++++|+||+|+++|.+|+++|++++|++++|++||+.++++++++.++.++++++++++++.+++++.+..+++...
T Consensus 758 ~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (941)
T TIGR01517 758 TSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSG 837 (941)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888776655554332
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccccCCCh
Q psy8116 406 GRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKSLTL 485 (591)
Q Consensus 406 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~~~l~~ 485 (591)
+..... .....++|++|++|+++|+||.+++|+.+. .++|+++++|++++.++++++++|++++++++.+|++.|+++
T Consensus 838 ~~~~~~-~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~-~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~ 915 (941)
T TIGR01517 838 PDEITS-HQQGELNTIVFNTFVLLQLFNEINARKLYE-RNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSI 915 (941)
T ss_pred cccccc-cccchhhHHHHHHHHHHHHHHHHHHccCCc-ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCH
Confidence 110000 113567899999999999999999998764 377888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8116 486 EQWLWCLFFGIGTLLWGQVVTTVPT 510 (591)
Q Consensus 486 ~~w~~~l~~~~~~ll~~eiik~i~~ 510 (591)
.+|++|++++++.++|.++.|++|+
T Consensus 916 ~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 916 EQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999874
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-75 Score=673.34 Aligned_cols=477 Identities=31% Similarity=0.475 Sum_probs=406.1
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhh-ccC
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC-DGL 83 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~-~Gl 83 (591)
+++.++.++||||+||||| ++++. ++++.+|+ ||.|+++|++++.++|...|++++.++++ ++.+++|++ +|+
T Consensus 418 ~~~~~~~~~pF~s~rK~ms-viv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~~~a~~~Gl 494 (917)
T TIGR01116 418 DKFKKLATLEFSRDRKSMS-VLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTI-LSVIKEMGTTKAL 494 (917)
T ss_pred hhcceeeecccChhhCeEE-EEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHH-HHHHHHHHhhcCC
Confidence 4567899999999999999 66654 46788888 99999999998887799999999988886 578999999 999
Q ss_pred eEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy8116 84 RTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR 163 (591)
Q Consensus 84 R~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~ 163 (591)
|||++|||+++.++.... ..+....+++|+||+|+|+++++||+|++++++|+.|+++||+++|+|||+..||.
T Consensus 495 Rvl~~A~k~~~~~~~~~~------~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~ 568 (917)
T TIGR01116 495 RCLALAFKDIPDPREEDL------LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568 (917)
T ss_pred eEEEEEEEECCccccccc------cccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHH
Confidence 999999999875321100 01112335789999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCc--eEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEE
Q psy8116 164 SIATKCGILKPGDD--FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAV 241 (591)
Q Consensus 164 ~ia~~~gi~~~~~~--~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~ 241 (591)
++|+++|+..++.. ...++|.++..+ ..+...+...+..+|||++|+||.++|+.+ +..+++|+|
T Consensus 569 ~ia~~~gi~~~~~~v~~~~~~g~~l~~~--------~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l-----q~~g~~va~ 635 (917)
T TIGR01116 569 AICRRIGIFSPDEDVTFKSFTGREFDEM--------GPAKQRAACRSAVLFSRVEPSHKSELVELL-----QEQGEIVAM 635 (917)
T ss_pred HHHHHcCCCCCCccccceeeeHHHHhhC--------CHHHHHHhhhcCeEEEecCHHHHHHHHHHH-----HhcCCeEEE
Confidence 99999999865443 246788877553 123345556778899999999999999984 566899999
Q ss_pred ECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy8116 242 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA 321 (591)
Q Consensus 242 iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~ 321 (591)
+|||.||+||||+|||||||| +|++.+|++||+++.||+|.+++++++|||++|+|++++++|.+++|+..+++.+++.
T Consensus 636 iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 714 (917)
T TIGR01116 636 TGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA 714 (917)
T ss_pred ecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999999999 8899999999999999999999999999999999999999999999999999999888
Q ss_pred ccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy8116 322 CAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLL 401 (591)
Q Consensus 322 ~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 401 (591)
++..+.|+++.|++|+|+++|.+|+++|+.++|++++|.+||+.+++++++++++.+|++.|++++++.++.+++.....
T Consensus 715 ~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 794 (917)
T TIGR01116 715 ALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLT 794 (917)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888999999999999999999999999999999999999999999999999999999999999987655443321110
Q ss_pred CCCC--CC-----C--C----CCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHH
Q psy8116 402 DIPT--GR-----G--A----EFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQ 467 (591)
Q Consensus 402 ~~~~--~~-----~--~----~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~ 467 (591)
+... +. + . ........++|++|++++++|+||.+|+|+.+ .++|+ ++++|++++.++++++++|
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~~~~~~~~~~l~ 872 (917)
T TIGR01116 795 HFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED--QSLLRMPPWVNKWLIGAICLSMALH 872 (917)
T ss_pred CcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc--ccccccCCccCHHHHHHHHHHHHHH
Confidence 1100 00 0 0 00012346789999999999999999999854 46776 7789999999999999999
Q ss_pred HHH--HhhccccccccCCChhHHHHHHHHHHHHHHHHHHHHhhc
Q psy8116 468 VFI--IQFGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVP 509 (591)
Q Consensus 468 ~~~--v~~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~ 509 (591)
+++ +++++.+|++.|+++.+|+++++++++.++++|+.|++.
T Consensus 873 ~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 873 FLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 877 566789999999999999999999999999999999874
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=674.19 Aligned_cols=482 Identities=26% Similarity=0.409 Sum_probs=398.2
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCC-cEEEEE---echhhhhcccccccCC-ceecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGG-GYRSLP---TKVLPRSCAFIYGRDG-NLEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~-~~~~~~---~e~il~~c~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
.++.++.+|||||+||||| ++++.+++ +|++|+ ||.|+++|+.+...+| +..|+++++++++ .+.+++||++|
T Consensus 523 ~~~~~~~~~pFds~rK~ms-vv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i-~~~~~~~a~~G 600 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEIKRMA-SIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELI-IANMESLAAEG 600 (1053)
T ss_pred cccceEEEeccCCCCCeEE-EEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHH-HHHHHHHHhcC
Confidence 4578899999999999999 66665444 588998 9999999998766555 6789999999887 57899999999
Q ss_pred CeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 83 LRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 83 lR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
+||||+|||+++.++...+. .+ ....+++++|+||+|+|+++++||+|++++++|+.|+++||+++|+|||+..||
T Consensus 601 lRvLa~A~r~l~~~~~~~~~--~~--~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA 676 (1053)
T TIGR01523 601 LRVLAFASKSFDKADNNDDQ--LK--NETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676 (1053)
T ss_pred CeEEEEEEEECCchhccchh--hh--ccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 99999999998764321000 00 001123567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCC--------ceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCC
Q psy8116 163 RSIATKCGILKPGD--------DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSD 234 (591)
Q Consensus 163 ~~ia~~~gi~~~~~--------~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~ 234 (591)
.++|+++||..++. ...+++|.++..+ .++.+++......+|||++|+||.++|+.+ +.
T Consensus 677 ~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l--------~~~~l~~~~~~~~V~ar~sP~~K~~iV~~l-----q~ 743 (1053)
T TIGR01523 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL--------SDEEVDDLKALCLVIARCAPQTKVKMIEAL-----HR 743 (1053)
T ss_pred HHHHHHcCCCCccccccccccccceeeehHHhhhc--------CHHHHHHHhhcCeEEEecCHHHHHHHHHHH-----Hh
Confidence 99999999975320 2368899888754 223445556677899999999999999995 55
Q ss_pred CCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy8116 235 SREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAV 314 (591)
Q Consensus 235 ~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~ 314 (591)
.+++|+|+|||.||+|||++||||||||.+|++++|++||+++.+|+|.++++++.+||++|+|++|++.|.+++|+..+
T Consensus 744 ~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i 823 (1053)
T TIGR01523 744 RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEA 823 (1053)
T ss_pred cCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 69999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccC-----CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy8116 315 IVAFIGACAV-----QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTV 389 (591)
Q Consensus 315 ~~~~~~~~~~-----~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~ 389 (591)
++.+++.++. .+.||+++|+||+|+++|.+|+++|++|||++++|.+||+.++++++++.++..++..+++.++.
T Consensus 824 ~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~ 903 (1053)
T TIGR01523 824 ILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGS 903 (1053)
T ss_pred HHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence 9988877763 24799999999999999999999999999999999999999999999999999999999988776
Q ss_pred HHHHHHHhhcccC--C-----CCCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc--------------
Q psy8116 390 VFTLLFVGDKLLD--I-----PTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-------------- 448 (591)
Q Consensus 390 ~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-------------- 448 (591)
.+..+++....++ . ...++.+. .....++|++|.+++++|+++.+++|+.+. ++|+
T Consensus 904 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~~~ 980 (1053)
T TIGR01523 904 CLASFTGILYGFGSGNLGHDCDAHYHAGC-NDVFKARSAAFATMTFCALILAVEVKDFDN--SFFNLHGIPDGDSNFKEF 980 (1053)
T ss_pred HHHHHHHHHHhccCccccccccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHhcCch--hhhhcCcccccccccccc
Confidence 6655442211110 0 00011100 123457899999999999999999998653 3332
Q ss_pred --cCccCHHHHHHHHHHHHHHHHHHh--hccc-cccccCCChhHHHHHHHHHHHHHHHHHHHHhhccCc
Q psy8116 449 --GFFSNPIFYSIWFITAASQVFIIQ--FGRE-AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRK 512 (591)
Q Consensus 449 --~~~~n~~~~~~~~~~~~~~~~~v~--~~~~-~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~ 512 (591)
+.|+|+++++++++++++++++++ +.+. +|++.|+++ +|++++.++++.+++.|+.|++.|++
T Consensus 981 ~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 981 FHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 368999999888888888876654 4554 999999996 89999999999999999999986544
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-74 Score=672.99 Aligned_cols=481 Identities=27% Similarity=0.391 Sum_probs=395.4
Q ss_pred cCCcceeeccCCcccceeeeEEeeCC---CCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRK---GGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACD 81 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~---~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 81 (591)
+++.++..+||||+||||+ +++... +++|++|+ ||.|+++|++++ .+|+..+++++.++++ ++.+++|+++
T Consensus 446 ~~~~~v~~~pF~s~rK~m~-~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~-~~~~~~~a~~ 522 (997)
T TIGR01106 446 ERNPKVVEIPFNSTNKYQL-SIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAF-QNAYLELGGL 522 (997)
T ss_pred hhCceeEEeccCCCCceEE-EEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHH-HHHHHHHHhc
Confidence 4677899999999999999 555432 34688888 999999999887 4788899999988876 5789999999
Q ss_pred cCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 82 GLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 82 GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
|+|||++|||+++.+++.... ..+.+..+.+|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..|
T Consensus 523 GlRvla~A~k~l~~~~~~~~~-----~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~t 597 (997)
T TIGR01106 523 GERVLGFCHLYLPDEQFPEGF-----QFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 597 (997)
T ss_pred CCEEEEEEEeecCcccccccc-----cccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 999999999998764321100 000111234589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCc----------------------eEEecchhhHHhhhcccchhhHHHHhhhcCcc--eEEEecCh
Q psy8116 162 ARSIATKCGILKPGDD----------------------FLILEGKEFNRRVRDANGDVQQHLLDKVWPRL--RVLARSSP 217 (591)
Q Consensus 162 a~~ia~~~gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~r~sp 217 (591)
|.++|+++|+..++.. ..+++|.+++.+. ++.+++...+. .||||++|
T Consensus 598 a~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~--------~~el~~~~~~~~~~VfaR~sP 669 (997)
T TIGR01106 598 AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT--------SEQLDEILKYHTEIVFARTSP 669 (997)
T ss_pred HHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCC--------HHHHHHHHHhcCCEEEEECCH
Confidence 9999999999764321 2678888886642 23344444443 49999999
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~ 297 (591)
+||.++|+.+ +..|++|+|+|||.||+||||+||||||||++|+|++|++||+++.||+|++++++++|||++|+
T Consensus 670 eqK~~IV~~l-----q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ 744 (997)
T TIGR01106 670 QQKLIIVEGC-----QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 744 (997)
T ss_pred HHHHHHHHHH-----HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHH
Confidence 9999999995 56789999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCC-CCCCCCHHHH
Q psy8116 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR-TKPLISKTMM 376 (591)
Q Consensus 298 ~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~-~~~~i~~~~~ 376 (591)
|++|+++|++++|+..+++.+++.++..++|++++|+||+|+++|.+|+++|++|||++++|.+||+.+ .++++++.++
T Consensus 745 ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~ 824 (997)
T TIGR01106 745 NLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLI 824 (997)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999974 6789999888
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhc--------ccCCCCCCC------------CCCCCC-----CcchhhhHHHHHHHHH
Q psy8116 377 KNIL-GQAIYQLTVVFTLLFVGDK--------LLDIPTGRG------------AEFGSE-----PTQHFTVIFNTFVFMT 430 (591)
Q Consensus 377 ~~~~-~~~i~~~~~~~~~~~~~~~--------~~~~~~~~~------------~~~~~~-----~~~~~t~~f~~~v~~~ 430 (591)
..++ ..|+++++..|+.+++... .+++...+. ..+... ...++|++|++++++|
T Consensus 825 ~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q 904 (997)
T TIGR01106 825 SMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQ 904 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHH
Confidence 7754 4577777766655543221 111100000 000000 0146899999999999
Q ss_pred HhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHh--hccccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 431 LFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 431 ~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~--~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
+||.+|||+.+ .++|+..++|++++.++++.+++++++++ +.+.+|++.++++.+|+++++++++.++++++.|++
T Consensus 905 ~~~~~~~R~~~--~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~ 982 (997)
T TIGR01106 905 WADLIICKTRR--NSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLI 982 (997)
T ss_pred HHHHHHhccCc--ccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999843 46776448999998888888887766544 458999999999999999999999999999999988
Q ss_pred ccC
Q psy8116 509 PTR 511 (591)
Q Consensus 509 ~~~ 511 (591)
.++
T Consensus 983 ~r~ 985 (997)
T TIGR01106 983 IRR 985 (997)
T ss_pred HHh
Confidence 754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-72 Score=651.87 Aligned_cols=454 Identities=33% Similarity=0.507 Sum_probs=385.2
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
++.++.+|||||+||||| ++++.++|+|.+|+ ||+|+++|+.. |+..+++++.++.+ .+..++|+++||||
T Consensus 439 ~~~~~~~~PFdS~rKrMs-viv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~-~~~~~~la~~glRv 512 (917)
T COG0474 439 EYPILAEIPFDSERKRMS-VIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTL-EEAVKELASEGLRV 512 (917)
T ss_pred hcceeEEecCCCCceEEE-EEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHH-HHHHHHHHHHHHHH
Confidence 346799999999999999 77776667799999 99999999976 77888999999887 57899999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
|++|||.++..+ ...+. +++|+||+|+|+++++||+|++++++|+.|++|||++||+||||..||.+|
T Consensus 513 la~A~k~~~~~~-----------~~~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aI 580 (917)
T COG0474 513 LAVAYKKLDRAE-----------KDDEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAI 580 (917)
T ss_pred HHHHhccCCccc-----------ccchh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHH
Confidence 999999776542 11111 678999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|++||+.......++++|.+++... ++.+.+...+..||||++|+||.++|+.+ |..|++|+|||||
T Consensus 581 a~~~Gi~~~~~~~~vi~G~el~~l~--------~~el~~~~~~~~VfARvsP~qK~~IV~~l-----q~~g~vVamtGDG 647 (917)
T COG0474 581 AKECGIEAEAESALVIDGAELDALS--------DEELAELVEELSVFARVSPEQKARIVEAL-----QKSGHVVAMTGDG 647 (917)
T ss_pred HHHcCCCCCCCceeEeehHHhhhcC--------HHHHHHHhhhCcEEEEcCHHHHHHHHHHH-----HhCCCEEEEeCCC
Confidence 9999997643335689999988753 23445555667799999999999999994 6679999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+||||+||||||||+.|+|++|+|||+++.|++|..+..+++|||++|.|++|++.|.+++|+..+++.+++.++..
T Consensus 648 vNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~ 727 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNL 727 (917)
T ss_pred chhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988887776
Q ss_pred C-CchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 326 D-SPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 326 ~-~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
+ .|+++.|+||+|+++|.+|+++|+.++|+.+.|.+||+++++++++++.++++++...++..+++++.|.........
T Consensus 728 ~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~ 807 (917)
T COG0474 728 FFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA 807 (917)
T ss_pred ccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6 999999999999999999999999999999999999999999999999999988887777776666555443322211
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHHHHHHhhc--c-ccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQVFIIQFG--R-EAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~~--~-~~F~~ 480 (591)
...+... ......|+.|.+++++|+++.+++|..+ .+++. .++.|+.++.+++++++++++..+++ . ..|+.
T Consensus 808 ~~~~~~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~ 883 (917)
T COG0474 808 NTLGLDL--FQALLQTTAFTVLVLIQLLLTLAVRSRG--RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQP 883 (917)
T ss_pred cccchhh--HHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccC
Confidence 1111000 1345789999999999999999999764 24554 46899999998888888887766543 4 68999
Q ss_pred cCCChhHHHHHHHHHHH
Q psy8116 481 KSLTLEQWLWCLFFGIG 497 (591)
Q Consensus 481 ~~l~~~~w~~~l~~~~~ 497 (591)
.+++..+|++++.+...
T Consensus 884 ~~~~~~~~~~~~~~~~~ 900 (917)
T COG0474 884 TPLSLFEWLIAIAVALL 900 (917)
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 99998889988877633
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-71 Score=642.93 Aligned_cols=450 Identities=31% Similarity=0.511 Sum_probs=397.7
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
.+.++.++||+|+||||++++....++++++|+ ||.|+++|+.+...+|...+++++.++++ ++.+++|+++|+||
T Consensus 427 ~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~~~a~~G~rv 505 (884)
T TIGR01522 427 TYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVI-QEEAAEMASAGLRV 505 (884)
T ss_pred hCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHH-HHHHHHHHhcCCEE
Confidence 567889999999999999444443456788888 99999999998877888899999888876 57889999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
+++|||+++ +||+|+|+++++||+||+++++|+.|+++|++++|+|||+..||.++
T Consensus 506 l~~A~~~~~------------------------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~i 561 (884)
T TIGR01522 506 IAFASGPEK------------------------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSI 561 (884)
T ss_pred EEEEEEcCC------------------------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 999998751 37999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|+++|+....+. .++|.++... ..+.+++...+..+|||++|+||..+|+.+ +..+++|+|+|||
T Consensus 562 a~~~Gi~~~~~~--~v~g~~l~~~--------~~~~l~~~~~~~~Vfar~~P~~K~~iv~~l-----q~~g~~v~mvGDG 626 (884)
T TIGR01522 562 ARRLGMPSKTSQ--SVSGEKLDAM--------DDQQLSQIVPKVAVFARASPEHKMKIVKAL-----QKRGDVVAMTGDG 626 (884)
T ss_pred HHHcCCCCCCCc--eeEhHHhHhC--------CHHHHHHHhhcCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCC
Confidence 999999764433 5688887653 234566677888999999999999999995 5568999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+||+++||||||||..++++++++||+++.||+|+.+.+++++||++|+|+++++.|.++.|+..+++.+++.++..
T Consensus 627 vND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 706 (884)
T TIGR01522 627 VNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGF 706 (884)
T ss_pred cccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcC
Confidence 99999999999999999779999999999999999999999999999999999999999999999999988888888888
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPT 405 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (591)
++|++++|+||+|+++|.+|+++|++|||++++|++||++++++++++.++.+++.+|++++++.+++++.. +. .
T Consensus 707 ~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~---~ 781 (884)
T TIGR01522 707 PNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVRE--MQ---D 781 (884)
T ss_pred CCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHH--Hc---C
Confidence 999999999999999999999999999999999999999999999999999999999999887766554432 11 0
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHHHHHHh--hccccccccC
Q psy8116 406 GRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQVFIIQ--FGREAFSTKS 482 (591)
Q Consensus 406 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~--~~~~~F~~~~ 482 (591)
+ .....++|++|++|+++|+||.+|+|+.. .++|+ ++++|++++.++++++++|+++++ +++.+|++.|
T Consensus 782 ~------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~ 853 (884)
T TIGR01522 782 G------VITARDTTMTFTCFVFFDMFNALACRSQT--KSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEA 853 (884)
T ss_pred C------cchhhHHHHHHHHHHHHHHHHHHHHccCC--ccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 01245789999999999999999999853 47776 788999999999999999987775 5689999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8116 483 LTLEQWLWCLFFGIGTLLWGQVVTTVPTR 511 (591)
Q Consensus 483 l~~~~w~~~l~~~~~~ll~~eiik~i~~~ 511 (591)
+++.+|++|++++++.++++|+.|++.++
T Consensus 854 l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 854 LSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988643
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-69 Score=619.84 Aligned_cols=458 Identities=20% Similarity=0.275 Sum_probs=373.8
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.+.++.++||+|+||+|+ ++++..+|++++|+ ||.|+++|+++.. +|+..+++++.++++ .+.+++++.+|+|
T Consensus 437 ~~~~~~~~~pF~s~~k~ms-~v~~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~r 513 (903)
T PRK15122 437 AGYRKVDELPFDFVRRRLS-VVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERL-LALAEAYNADGFR 513 (903)
T ss_pred hcCceEEEeeeCCCcCEEE-EEEEcCCCcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHH-HHHHHHHHhCCCE
Confidence 4577889999999999999 66666567788887 9999999998764 678889999888886 4678999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++.. . ...+..|+||+|+|+++++||+|||++++|++|+++||+++|+|||+..||.+
T Consensus 514 vlavA~k~~~~~~~~----------~-~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 514 VLLVATREIPGGESR----------A-QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred EEEEEEeccCccccc----------c-ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 999999998653210 0 01123478999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||.. + -+++|.++..+ ..+.+++...+..+|+|++|+||.++|+.+ |..|++|+|+||
T Consensus 583 IA~~lGI~~--~--~vi~G~el~~~--------~~~el~~~v~~~~VfAr~sPe~K~~iV~~L-----q~~G~vVamtGD 645 (903)
T PRK15122 583 ICREVGLEP--G--EPLLGTEIEAM--------DDAALAREVEERTVFAKLTPLQKSRVLKAL-----QANGHTVGFLGD 645 (903)
T ss_pred HHHHcCCCC--C--CccchHhhhhC--------CHHHHHHHhhhCCEEEEeCHHHHHHHHHHH-----HhCCCEEEEECC
Confidence 999999952 2 26789888764 234566777888999999999999999994 567999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|||++|||||||| +|+|+||++||+|+.||+|+.+++++++||.+|+|++|++.|.++.|+..++..+++.++.
T Consensus 646 GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~ 724 (903)
T PRK15122 646 GINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI 724 (903)
T ss_pred CchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999998888777776666
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|+++.|+||+|+++|+ |+++|++|||++++| +||++++.+++++.++...+..++ ..+..|+++++. ++.
T Consensus 725 ~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~---~~~- 797 (903)
T PRK15122 725 PFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSI-FDITTFALMWFV---FAA- 797 (903)
T ss_pred ccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHH---hcc-
Confidence 6789999999999999995 999999999999999 999999999999877642222222 222223222211 110
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHH--hh--ccccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFII--QF--GREAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v--~~--~~~~F~~ 480 (591)
+ .. . ..+..+|..|.+++++|+++.+++|+.+. + +|+|++.+..++++++++++++ ++ .+.+|++
T Consensus 798 -~--~~-~-~~~~~~t~~f~~l~~~q~~~~~~~R~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 866 (903)
T PRK15122 798 -N--SV-E-MQALFQSGWFIEGLLSQTLVVHMLRTQKI--P----FIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGL 866 (903)
T ss_pred -C--cH-h-hhhhhHHHHHHHHHHHHHHHHHhhCcCCC--C----cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Confidence 1 00 0 01134578899999999999999997532 3 3456665555555666665443 43 4789999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHhhccCcccc
Q psy8116 481 KSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPK 515 (591)
Q Consensus 481 ~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~~~~ 515 (591)
.++++.+|++++.+++..+++.|+.|.+..+++++
T Consensus 867 ~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~~~ 901 (903)
T PRK15122 867 EPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRFGQ 901 (903)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999776665544
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-66 Score=598.73 Aligned_cols=452 Identities=17% Similarity=0.253 Sum_probs=360.1
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.+.++.++||||+||+|+ ++++.+++++.+|+ ||.|+++|+++.. +|+..+++++.++++ .+.+++++++|+|
T Consensus 439 ~~~~~~~~~pFds~~k~ms-vvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~r 515 (902)
T PRK10517 439 SRWQKIDEIPFDFERRRMS-VVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRI-KRVTDTLNRQGLR 515 (902)
T ss_pred hcCceEEEeeeCCCcceEE-EEEEECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHH-HHHHHHHHhcCCE
Confidence 4677889999999999999 66665566777887 9999999998764 677889999888876 5788999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++. .. +...|+|++|+|+++++||+||+++++|++|+++||+++|+|||+..||.+
T Consensus 516 vlavA~k~~~~~~~-----------~~--~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~ 582 (902)
T PRK10517 516 VVAVATKYLPAREG-----------DY--QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAK 582 (902)
T ss_pred EEEEEEecCCcccc-----------cc--ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 99999998865321 01 111368999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||.. + -+++|.+++.+ ..+.+++...+..+|+|++|+||.++|+.+ |..|++|+|+||
T Consensus 583 IA~~lGI~~--~--~v~~G~el~~l--------~~~el~~~~~~~~VfAr~sPe~K~~IV~~L-----q~~G~vVam~GD 645 (902)
T PRK10517 583 VCHEVGLDA--G--EVLIGSDIETL--------SDDELANLAERTTLFARLTPMHKERIVTLL-----KREGHVVGFMGD 645 (902)
T ss_pred HHHHcCCCc--c--CceeHHHHHhC--------CHHHHHHHHhhCcEEEEcCHHHHHHHHHHH-----HHCCCEEEEECC
Confidence 999999942 2 36788888754 234566777888999999999999999994 567999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+||||+|||||||| +|+|+||++||+|+.||+|..|++++++||++|+|++|+++|.++.|+..++..+++.++.
T Consensus 646 GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 646 GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999988888777666
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|++|.|+||+|+++| +++++|++|||++++|++||+ ++... ....++..|++.+++.+..++.....++.
T Consensus 725 ~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 797 (902)
T PRK10517 725 PFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPAD----LGRFMVFFGPISSIFDILTFCLMWWVFHA- 797 (902)
T ss_pred hhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHccc-
Confidence 568999999999999999 689999999999999999886 22222 33334555555444333333222111111
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHH--h--hccccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFII--Q--FGREAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v--~--~~~~~F~~ 480 (591)
..+ . ..+..++..|.+++++|+++.+++|+.+. ++|.|++.+..++.+++++++.+ + +.+.+|++
T Consensus 798 ---~~~-~-~~~~~~~~~F~~~~~~q~~~~~~~R~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 866 (902)
T PRK10517 798 ---NTP-E-TQTLFQSGWFVVGLLSQTLIVHMIRTRRI------PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQL 866 (902)
T ss_pred ---cch-h-hHhHHHHHHHHHHHHHHHHHHHhhccCCC------CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCC
Confidence 000 0 00123456699999999999999997532 34577777777766776665444 3 34789999
Q ss_pred cCCC--hhHHHHHHHHHHHHHHHHHHHHhhccCcc
Q psy8116 481 KSLT--LEQWLWCLFFGIGTLLWGQVVTTVPTRKL 513 (591)
Q Consensus 481 ~~l~--~~~w~~~l~~~~~~ll~~eiik~i~~~~~ 513 (591)
.+++ +..|++++.++.. ++.|+.|....+++
T Consensus 867 ~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 867 QALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred cCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 9999 5667776666655 66888887755544
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-66 Score=593.55 Aligned_cols=453 Identities=21% Similarity=0.277 Sum_probs=361.0
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
..+.++.++||||+||+|+ ++++.+++.+.+|+ ||.|+++|+++.. +|...+++++.++++ ++.+++|+++|+|
T Consensus 404 ~~~~~~~~~pF~s~~k~ms-~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~r 480 (867)
T TIGR01524 404 SRWKKVDEIPFDFDRRRLS-VVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSEL-QDMTAEMNRQGIR 480 (867)
T ss_pred hcCceEEEeccCCCcCEEE-EEEEcCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHH-HHHHHHHHhcCCE
Confidence 4677889999999999999 66665555577777 9999999998754 677889998888876 5788999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++. .. .++.|+||+|+|+++++||+||+++++|++|+++||+++|+|||+..||.+
T Consensus 481 vlavA~~~~~~~~~-----------~~--~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~a 547 (867)
T TIGR01524 481 VIAVATKTLKVGEA-----------DF--TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTAR 547 (867)
T ss_pred EEEEEEeccCcccc-----------cc--cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 99999999865421 00 111267999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||... -+++|.++... ..+.+.+...+..+|+|++|+||.++|+.+ |..|++|+|+||
T Consensus 548 IA~~lGI~~~----~v~~g~~l~~~--------~~~el~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~vVam~GD 610 (867)
T TIGR01524 548 ICQEVGIDAN----DFLLGADIEEL--------SDEELARELRKYHIFARLTPMQKSRIIGLL-----KKAGHTVGFLGD 610 (867)
T ss_pred HHHHcCCCCC----CeeecHhhhhC--------CHHHHHHHhhhCeEEEECCHHHHHHHHHHH-----HhCCCEEEEECC
Confidence 9999999532 25778887653 234566677888999999999999999994 667999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|||++|||||||| +|+|+||++||+|+.||+|+.+++++++||++|+|++|+++|+++.|+..++..+++.++.
T Consensus 611 GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~ 689 (867)
T TIGR01524 611 GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI 689 (867)
T ss_pred CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999988888777776
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|+++.|+||+|+++| +|+++|++|||++++|.+||+ ++.+. +...++..|++.+++.+..++.....+..
T Consensus 690 ~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 762 (867)
T TIGR01524 690 PFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFVFSA- 762 (867)
T ss_pred hhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 678999999999999999 799999999999999976554 55543 33445555555444333332221111110
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc----cccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG----REAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~----~~~F~~ 480 (591)
.+ . ......+|..|.+++++|+++.+++|+.+. ++|.|++.+..+++++++++++++.+ +.+|++
T Consensus 763 ~~--~---~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~------~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 831 (867)
T TIGR01524 763 NT--V---EEQALFQSGWFVVGLLSQTLVVHMIRTEKI------PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGL 831 (867)
T ss_pred cc--h---hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC------CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhcc
Confidence 00 0 011234688899999999999999997531 34578888887777887776665433 679999
Q ss_pred cCCCh--hHHHHHHHHHHHHHHHHHHHHhhccCccc
Q psy8116 481 KSLTL--EQWLWCLFFGIGTLLWGQVVTTVPTRKLP 514 (591)
Q Consensus 481 ~~l~~--~~w~~~l~~~~~~ll~~eiik~i~~~~~~ 514 (591)
.++++ ..|++++.+++. ++.++.|.+..++++
T Consensus 832 ~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~~~ 865 (867)
T TIGR01524 832 VSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRRFG 865 (867)
T ss_pred ccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHhcc
Confidence 98854 566666665554 678898877655544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-67 Score=559.23 Aligned_cols=481 Identities=28% Similarity=0.425 Sum_probs=397.3
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCC---CcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKG---GGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACD 81 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~---~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 81 (591)
+...++.+.||||.+|+.- .+++.++ .++.+.+ ||.++++|+.+.- +|+..|++++.++.. .+..+++...
T Consensus 468 ~~~~kv~eipfNSt~Kyql-sih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f-~~ay~~lg~~ 544 (1019)
T KOG0203|consen 468 ERNPKVAEIPFNSTNKYQL-SIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAF-QEAYLELGGL 544 (1019)
T ss_pred HhhHHhhcCCcccccceEE-EEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHH-HHHHHHhhhc
Confidence 4567889999999999987 8887655 2455544 9999999999876 899999999888876 5788999999
Q ss_pred cCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 82 GLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 82 GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
|-||++||++.++.+++.....-. .+.-+.--.+|.|+|++++-||+|..+|+++.+|+.|||+|.|+|||++.|
T Consensus 545 GerVlgF~~~~l~~~~~p~~~~f~-----~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiT 619 (1019)
T KOG0203|consen 545 GERVLGFCDLELPDEKFPRGFQFD-----TDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 619 (1019)
T ss_pred chHHHHHHHHhcchhcCCCceEee-----cCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccch
Confidence 999999999999866532111100 111122245899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC----------------------ceEEecchhhHHhhhcccchhhHHHHhhhcCc--ceEEEecCh
Q psy8116 162 ARSIATKCGILKPGD----------------------DFLILEGKEFNRRVRDANGDVQQHLLDKVWPR--LRVLARSSP 217 (591)
Q Consensus 162 a~~ia~~~gi~~~~~----------------------~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~~r~sp 217 (591)
|+++|++.||...+. ...++.|.++.+ ...+.++++..+ -.||||.||
T Consensus 620 AkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~--------~~~~qld~il~nh~eIVFARTSP 691 (1019)
T KOG0203|consen 620 AKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD--------MSSEQLDELLQNHQEIVFARTSP 691 (1019)
T ss_pred hhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc--------cCHHHHHHHHHhCCceEEEecCc
Confidence 999999999865422 223344444332 234455554432 359999999
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~ 297 (591)
+||..+|+. .|..|++|+++|||.||.||||+||||||||.+|+|++|+|||+|+.||||.+|+..+++||.+|+
T Consensus 692 qQKLiIVe~-----cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFD 766 (1019)
T KOG0203|consen 692 QQKLIIVEG-----CQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 766 (1019)
T ss_pred cceEEeEhh-----hhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhh
Confidence 999999998 688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCC-CCCCCCCHHHH
Q psy8116 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG-RTKPLISKTMM 376 (591)
Q Consensus 298 ~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~-~~~~~i~~~~~ 376 (591)
|++|.+.|.++.|+..+.+.+++.++..|.|+..+++|.+++.+|..|+++||+|+|+.++|+|+|+. +++.|+|.+.+
T Consensus 767 NLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi 846 (1019)
T KOG0203|consen 767 NLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLI 846 (1019)
T ss_pred hHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 77889988876
Q ss_pred H-HHHHHHHHHHHHHHHHHHHh--------------------hcccCCCCCCCCCCCCCC-----cchhhhHHHHHHHHH
Q psy8116 377 K-NILGQAIYQLTVVFTLLFVG--------------------DKLLDIPTGRGAEFGSEP-----TQHFTVIFNTFVFMT 430 (591)
Q Consensus 377 ~-~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~-----~~~~t~~f~~~v~~~ 430 (591)
. .++..|.+|++..|+.+|.. ...-|+.+++|..|..+. .+.+|..|.++|++|
T Consensus 847 ~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q 926 (1019)
T KOG0203|consen 847 SYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQ 926 (1019)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHh
Confidence 5 56666899998888877641 122345666666665432 234688999999999
Q ss_pred HhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc--cccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 431 LFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG--REAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 431 ~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
+++++.|.+.+ .++|+.-++|+.+++.++..+++..++.+.+ ...|++.|+.+..|+..+.+++..++.+|+.|++
T Consensus 927 ~adLii~KTRR--nSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 927 WADLIICKTRR--NSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred HhhHHhhhcch--hHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHh
Confidence 99999987644 3678766999999888877777666555444 5689999999988888888999999999999988
Q ss_pred ccC
Q psy8116 509 PTR 511 (591)
Q Consensus 509 ~~~ 511 (591)
-|+
T Consensus 1005 IR~ 1007 (1019)
T KOG0203|consen 1005 IRR 1007 (1019)
T ss_pred hhh
Confidence 655
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-62 Score=573.34 Aligned_cols=440 Identities=22% Similarity=0.275 Sum_probs=342.5
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.++.++..|||||++|||||++....++++.+|+ ||.|+++|+.. . . .++ +++.+++|+++|+|
T Consensus 550 ~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----~----~----p~~-~~~~~~~~a~~G~R 616 (1054)
T TIGR01657 550 QELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----T----V----PSD-YQEVLKSYTREGYR 616 (1054)
T ss_pred ceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc----C----C----Chh-HHHHHHHHHhcCCE
Confidence 5678899999999999999444433345678888 99999999841 1 1 122 35678999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|||+|||++++.+.+ .....+++++|+||+|+|+++++||+||+++++|+.|++|||+++|+|||+..||.+
T Consensus 617 VLalA~k~l~~~~~~--------~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~ 688 (1054)
T TIGR01657 617 VLALAYKELPKLTLQ--------KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVH 688 (1054)
T ss_pred EEEEEEeecCccchh--------hhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 999999998742210 011124578899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCc---------------------------------------------------eEEecchhhHHhhhcc
Q psy8116 165 IATKCGILKPGDD---------------------------------------------------FLILEGKEFNRRVRDA 193 (591)
Q Consensus 165 ia~~~gi~~~~~~---------------------------------------------------~i~l~g~~~~~~~~~~ 193 (591)
+|+++||..+++. .++++|+++.....
T Consensus 689 iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~-- 766 (1054)
T TIGR01657 689 VARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA-- 766 (1054)
T ss_pred HHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH--
Confidence 9999999765422 13445555443211
Q ss_pred cchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcc
Q psy8116 194 NGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEAS 273 (591)
Q Consensus 194 ~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aa 273 (591)
...+.+++...+..||||++|+||.++|+. +|..|++|+|+|||+||+||||+||||||||++ | |..||
T Consensus 767 ---~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~-----lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~--d-as~AA 835 (1054)
T TIGR01657 767 ---HSPELLLRLLSHTTVFARMAPDQKETLVEL-----LQKLDYTVGMCGDGANDCGALKQADVGISLSEA--E-ASVAA 835 (1054)
T ss_pred ---hhHHHHHHHHhcCeEEEecCHHHHHHHHHH-----HHhCCCeEEEEeCChHHHHHHHhcCcceeeccc--c-ceeec
Confidence 122456677788899999999999999999 466799999999999999999999999999943 4 45899
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCC
Q psy8116 274 DIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEM 353 (591)
Q Consensus 274 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~ 353 (591)
|+++.+++|++++++|++||+++.++.++++|.+.+++...+..++ ++..++|++++|+||+|++++++++++++.++
T Consensus 836 ~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~ 913 (1054)
T TIGR01657 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNK 913 (1054)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999887665543 23356899999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCC-CCCCCCCCCCCcchhhhHHHHHHHHHH
Q psy8116 354 PTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL-LDIP-TGRGAEFGSEPTQHFTVIFNTFVFMTL 431 (591)
Q Consensus 354 ~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~t~~f~~~v~~~~ 431 (591)
|.+++|+++| ..+++++.++.++++++++++++.+.+++..... +..+ .....+....+....|++| .++++|.
T Consensus 914 p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~ 989 (1054)
T TIGR01657 914 PLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQY 989 (1054)
T ss_pred chhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHH
Confidence 9999999999 4679999999999999999998887776654321 1100 0000001112344568888 5555666
Q ss_pred hhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHH----HhhccccccccCCChhHHHH
Q psy8116 432 FNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFI----IQFGREAFSTKSLTLEQWLW 490 (591)
Q Consensus 432 ~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~----v~~~~~~F~~~~l~~~~w~~ 490 (591)
+..+.+++. ..++.+++++|++++..+++.+++++++ +++.+.+|++.+++. .|-+
T Consensus 990 ~~~~~~~~~--g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 1049 (1054)
T TIGR01657 990 LITAIVNSK--GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFRS 1049 (1054)
T ss_pred HHheEEEcC--CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHHH
Confidence 666666654 2366678999998888777666655432 345588999999985 3433
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-61 Score=566.43 Aligned_cols=471 Identities=21% Similarity=0.257 Sum_probs=343.8
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.++.++..+||||+||||| ++++.++|++.+|+ ||+|+++|+.. +++.++++ ++.+++|+++|+|
T Consensus 507 ~~~~il~~~pF~s~rKrmS-viv~~~~~~~~l~~KGA~e~il~~~~~~----------~~~~~~~~-~~~~~~~a~~GlR 574 (1057)
T TIGR01652 507 KEYEILNVLEFNSDRKRMS-VIVRNPDGRIKLLCKGADTVIFKRLSSG----------GNQVNEET-KEHLENYASEGLR 574 (1057)
T ss_pred EEEEEEEecccCCCCCeEE-EEEEeCCCeEEEEEeCcHHHHHHHhhcc----------chhHHHHH-HHHHHHHHHcCCc
Confidence 4678889999999999999 66666677889999 99999999741 12334444 6789999999999
Q ss_pred EEEEEEEecCCCcccccccccCC-CC---C-----CchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEc
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDT-EP---N-----WDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVT 155 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~-~~---~-----~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~T 155 (591)
|||+|||++++++++.+...+.+ .. + ....+++|+||+|+|++|++||+|++++++|+.|++|||++||+|
T Consensus 575 tL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlT 654 (1057)
T TIGR01652 575 TLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLT 654 (1057)
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEc
Confidence 99999999987654332211110 00 0 011256899999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCceEEe---------------------------------------cchhhHHhhhcccch
Q psy8116 156 GDNINTARSIATKCGILKPGDDFLIL---------------------------------------EGKEFNRRVRDANGD 196 (591)
Q Consensus 156 Gd~~~ta~~ia~~~gi~~~~~~~i~l---------------------------------------~g~~~~~~~~~~~~~ 196 (591)
||+.+||.++|++||+++++...+.+ +|.++.....+.
T Consensus 655 GD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~--- 731 (1057)
T TIGR01652 655 GDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEE--- 731 (1057)
T ss_pred CCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhH---
Confidence 99999999999999998766544443 444333222110
Q ss_pred hhHHHHhhhcC--cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 197 VQQHLLDKVWP--RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 197 ~~~~~l~~~~~--~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
.++.+.++.. +..|+||++|+||+++|+.+++. .+++|+|||||.||+||||+|||||++.+....+|+.+||
T Consensus 732 -~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~----~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD 806 (1057)
T TIGR01652 732 -LEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKS----TGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASD 806 (1057)
T ss_pred -HHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhc----CCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhh
Confidence 1112233333 34599999999999999996432 3889999999999999999999999875344447899999
Q ss_pred ccccCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCC---CchhHHHHHHHHHHHhhhhhhhhc
Q psy8116 275 IILTDDNFSSIVKAV-MWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQD---SPLKAVQMLWVNLIMDTLASLALA 350 (591)
Q Consensus 275 ~vl~~~~~~~i~~~i-~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~---~pl~~~q~l~~nli~~~~~~l~l~ 350 (591)
+++. +|+.+.+++ .|||++|+|+++++.|++++|++.+++.+++.++..+ +++.+++++|+|++++.+|+++++
T Consensus 807 ~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~ 884 (1057)
T TIGR01652 807 FAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLG 884 (1057)
T ss_pred hhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999 699999998 5899999999999999999999999999998876543 467899999999999999999997
Q ss_pred c--CCCCcccccCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCCCCCCCCCCcchhhhHH
Q psy8116 351 T--EMPTPDLLLRKPY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDI-PTGRGAEFGSEPTQHFTVIF 423 (591)
Q Consensus 351 ~--~~~~~~l~~~~P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~t~~f 423 (591)
. +++++++|.++|+ ++++++++.+.++.|++.|++|++++|++.+......+. .+|... ......+++|
T Consensus 885 ~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~ 960 (1057)
T TIGR01652 885 VFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLD----DFSSVGVIVF 960 (1057)
T ss_pred HhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccc----chhhHHHHHH
Confidence 6 6788999999997 677889999999999999999999988776544322221 112111 1223445666
Q ss_pred HHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHH----HHHhhc-c-c---cccccCCChhHHHHHHHH
Q psy8116 424 NTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQV----FIIQFG-R-E---AFSTKSLTLEQWLWCLFF 494 (591)
Q Consensus 424 ~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~----~~v~~~-~-~---~F~~~~l~~~~w~~~l~~ 494 (591)
.++++...+..+..-..| +++.++.+++++++.+ ++..+. + . .+....-++..|+.+++.
T Consensus 961 ~~~~~~~~~~~~~~~~~w-----------t~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~ 1029 (1057)
T TIGR01652 961 TALVVIVNLKIALEINRW-----------NWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVI 1029 (1057)
T ss_pred HHHHHHHHHHHHHHHhHh-----------HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHH
Confidence 666555544433221111 1111111222222221 111111 1 0 111222467789999999
Q ss_pred HHHHHHHHHHHHhhccCcccc
Q psy8116 495 GIGTLLWGQVVTTVPTRKLPK 515 (591)
Q Consensus 495 ~~~~ll~~eiik~i~~~~~~~ 515 (591)
.+++++++.+++.+.+...|.
T Consensus 1030 ~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1030 VLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999987766653
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-58 Score=536.06 Aligned_cols=471 Identities=18% Similarity=0.191 Sum_probs=336.5
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccC
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGL 83 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~Gl 83 (591)
.++|.++..|||+|+||||| ++++.++|++.+|+ ||+|+++|+...+ ++.+++ +++.+++||++||
T Consensus 600 ~~~~~il~~~pF~S~rKrMS-vIv~~~~~~~~l~~KGA~e~il~~~~~~~~---------~~~~~~-~~~~l~~~a~~Gl 668 (1178)
T PLN03190 600 RQRFNVLGLHEFDSDRKRMS-VILGCPDKTVKVFVKGADTSMFSVIDRSLN---------MNVIRA-TEAHLHTYSSLGL 668 (1178)
T ss_pred eecceeEEEecccccccEEE-EEEEcCCCcEEEEEecCcHHHHHhhccccc---------chhHHH-HHHHHHHHHhcCC
Confidence 46788899999999999999 66676778899999 9999999975422 223333 3578999999999
Q ss_pred eEEEEEEEecCCCcccccccccC---------CCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEE
Q psy8116 84 RTISIAYRDFVPGKAEINQVHID---------TEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMV 154 (591)
Q Consensus 84 R~l~~A~k~~~~~~~~~~~~~~~---------~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~ 154 (591)
||||+|||++++++++.+...++ ++...+..+++|+||+++|+++++|++|++++++|++|++|||++||+
T Consensus 669 RtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ml 748 (1178)
T PLN03190 669 RTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVL 748 (1178)
T ss_pred ceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 99999999998765443322211 111111235689999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCceEEecc-----------------------------------------------hhhH
Q psy8116 155 TGDNINTARSIATKCGILKPGDDFLILEG-----------------------------------------------KEFN 187 (591)
Q Consensus 155 TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-----------------------------------------------~~~~ 187 (591)
|||+.+||.+||++|||++++...+.+++ .++.
T Consensus 749 TGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~ 828 (1178)
T PLN03190 749 TGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLV 828 (1178)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHH
Confidence 99999999999999999887655444433 2222
Q ss_pred HhhhcccchhhHHHHhhhcCc--ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCc
Q psy8116 188 RRVRDANGDVQQHLLDKVWPR--LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAG 265 (591)
Q Consensus 188 ~~~~~~~~~~~~~~l~~~~~~--~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~ 265 (591)
....+ ...+.+.++..+ ..+|||++|.||+++|+.+++. .+++|++||||+||++|||+|||||++.+..
T Consensus 829 ~~l~~----~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~----~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~E 900 (1178)
T PLN03190 829 YVLDS----ELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNR----TSDMTLAIGDGANDVSMIQMADVGVGISGQE 900 (1178)
T ss_pred HHhhh----HHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhc----CCcEEEEECCCcchHHHHHhcCeeeeecCch
Confidence 21110 011233343333 3479999999999999997543 3578999999999999999999999765444
Q ss_pred cHHHHhcccccccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCch---hHHHHHHHHHHH
Q psy8116 266 TDVAKEASDIILTDDNFSSIVKAVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPL---KAVQMLWVNLIM 341 (591)
Q Consensus 266 ~~~ak~aad~vl~~~~~~~i~~~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl---~~~q~l~~nli~ 341 (591)
..+|+.+||+++. .|..+.+++. |||+.|.|+.++++|.+|+|++.++++|++.+++++++. .++.+.++|+++
T Consensus 901 G~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~f 978 (1178)
T PLN03190 901 GRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIY 978 (1178)
T ss_pred hHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 5589999999999 9999999998 999999999999999999999999999999988877764 578899999999
Q ss_pred hhhhhhhhcc--CCCCcccccCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q psy8116 342 DTLASLALAT--EMPTPDLLLRKPY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415 (591)
Q Consensus 342 ~~~~~l~l~~--~~~~~~l~~~~P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (591)
+.+|.++++. ++.+++.+.+.|. ++++..++.+.|+.|++.|+||++++|++.++....... ++
T Consensus 979 TslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~-~~--------- 1048 (1178)
T PLN03190 979 TALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTI-DG--------- 1048 (1178)
T ss_pred HhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-Cc---------
Confidence 9999999865 4566667777784 667788999999999999999999988775543211110 01
Q ss_pred cchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc--cc--cccccCCChhHHHHH
Q psy8116 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG--RE--AFSTKSLTLEQWLWC 491 (591)
Q Consensus 416 ~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~--~F~~~~l~~~~w~~~ 491 (591)
....++.+.+.++...+.... ..+.+ ++ +....+|+++++.+++.+++..++ .. .+....-++..|+.+
T Consensus 1049 ~~~~~~~~~~~v~~vnl~i~~--~~~~w-t~----~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~i 1121 (1178)
T PLN03190 1049 SSIGDLWTLAVVILVNLHLAM--DIIRW-NW----ITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCL 1121 (1178)
T ss_pred eeEhHhhhhHHHHHHHHHHHH--HHhhh-hH----HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhccHHHHHHH
Confidence 111223333333322222211 11110 11 001111222222222222221111 10 111122357789888
Q ss_pred HHHHHHHHHHHHHHHhhccCcccc
Q psy8116 492 LFFGIGTLLWGQVVTTVPTRKLPK 515 (591)
Q Consensus 492 l~~~~~~ll~~eiik~i~~~~~~~ 515 (591)
+++.+++++++.++|.+.+...|.
T Consensus 1122 ll~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1122 LAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888899999999999987776664
|
|
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-58 Score=523.27 Aligned_cols=477 Identities=20% Similarity=0.272 Sum_probs=350.2
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccC
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGL 83 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~Gl 83 (591)
+++|..+...||||+||||| ||++.++|+.++|| +.+|+++++. ++ +..+++ ..+++++||.+||
T Consensus 526 ~~~y~lL~iLeF~S~RKRMS-VIVR~p~g~i~LycKGADsvI~erL~~----~~------~~~~e~-T~~Hl~~yA~eGL 593 (1151)
T KOG0206|consen 526 EETYELLNVLEFNSTRKRMS-VIVRDPDGRILLYCKGADSVIFERLSK----NG------EKLREK-TQEHLEEYATEGL 593 (1151)
T ss_pred ceeEEEEEEeccccccceeE-EEEEcCCCcEEEEEcCcchhhHhhhhh----cc------hHHHHH-HHHHHHHHHhhhh
Confidence 56788888899999999999 77788999999999 8899999984 11 222333 3478999999999
Q ss_pred eEEEEEEEecCCCcccccccccC-CCCCC--------chhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEE
Q psy8116 84 RTISIAYRDFVPGKAEINQVHID-TEPNW--------DDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMV 154 (591)
Q Consensus 84 R~l~~A~k~~~~~~~~~~~~~~~-~~~~~--------~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~ 154 (591)
||||+|||++++++++.|.+.+. ..... +..+.+|+||+++|.+++||+++++||++|+.|++||||+||+
T Consensus 594 RTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVL 673 (1151)
T KOG0206|consen 594 RTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVL 673 (1151)
T ss_pred hHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEE
Confidence 99999999999999876655442 11111 2236799999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCceEEecchh---------------------------------------------hHHh
Q psy8116 155 TGDNINTARSIATKCGILKPGDDFLILEGKE---------------------------------------------FNRR 189 (591)
Q Consensus 155 TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~---------------------------------------------~~~~ 189 (591)
|||+.+||.+|+.+|++++++...+.++... +...
T Consensus 674 TGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~a 753 (1151)
T KOG0206|consen 674 TGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYA 753 (1151)
T ss_pred cCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhh
Confidence 9999999999999999998877666654422 1111
Q ss_pred hhcccchhhHHHHh-hhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH
Q psy8116 190 VRDANGDVQQHLLD-KVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV 268 (591)
Q Consensus 190 ~~~~~~~~~~~~l~-~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ 268 (591)
+.+ +.....++ ...++..++||++|.||+.+|+.+++ ..+.++++||||+||++|++.|||||++++.+..+
T Consensus 754 L~~---~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~----~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQ 826 (1151)
T KOG0206|consen 754 LED---ELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKK----GLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQ 826 (1151)
T ss_pred hCc---hhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHh----cCCceEEEeeCCCccchheeeCCcCeeeccchhhh
Confidence 100 00111111 22356678999999999999999854 46889999999999999999999999999899999
Q ss_pred HHhcccccccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCC---chhHHHHHHHHHHHhhh
Q psy8116 269 AKEASDIILTDDNFSSIVKAVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDS---PLKAVQMLWVNLIMDTL 344 (591)
Q Consensus 269 ak~aad~vl~~~~~~~i~~~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~---pl~~~q~l~~nli~~~~ 344 (591)
|..+||+.+. .|..+.+++. ||||.|.|+++++.|.+|+|+.+.++.|++.++++++ .+.++++.++|++++.+
T Consensus 827 AvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSl 904 (1151)
T KOG0206|consen 827 AVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSL 904 (1151)
T ss_pred hhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecC
Confidence 9999999999 8999999987 9999999999999999999999999999999877554 35678899999999999
Q ss_pred hhhhhcc--CCCCcccccCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCCCCCCCCCCCCCcc
Q psy8116 345 ASLALAT--EMPTPDLLLRKPY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL-LDIPTGRGAEFGSEPTQ 417 (591)
Q Consensus 345 ~~l~l~~--~~~~~~l~~~~P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 417 (591)
|.++++. .+.+.+.+.+.|. ++++..++++.++.|++.|+++++++|++.+..... .-..+|...+.+...
T Consensus 905 Pvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G-- 982 (1151)
T KOG0206|consen 905 PVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLG-- 982 (1151)
T ss_pred chhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhcc--
Confidence 9999976 5678888888884 677778999999999999999999998775433211 111223322322222
Q ss_pred hhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHH-HHHHHHHHHHHHHHHHhhc---------cccccccCCChhH
Q psy8116 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPI-FYSIWFITAASQVFIIQFG---------REAFSTKSLTLEQ 487 (591)
Q Consensus 418 ~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~-~~~~~~~~~~~~~~~v~~~---------~~~F~~~~l~~~~ 487 (591)
+.++++.|+...+... ... +.| . |.|.+ .|+++++-+++.+++.... ...+....-++..
T Consensus 983 --~~~~T~~Vivv~~~ia--L~~----~yw-T-~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~f 1052 (1151)
T KOG0206|consen 983 --TTVFTIIVIVVNLKIA--LET----SYW-T-WINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSF 1052 (1151)
T ss_pred --ceEEEEEEEEEEeeee--eee----hhe-e-HHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchH
Confidence 2222222221111100 001 111 0 11222 2222222222222221100 0112223346788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccc
Q psy8116 488 WLWCLFFGIGTLLWGQVVTTVPTRKLPKI 516 (591)
Q Consensus 488 w~~~l~~~~~~ll~~eiik~i~~~~~~~~ 516 (591)
|+.+++..+.+++++.+.|.+.+...|..
T Consensus 1053 Wl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1053 WLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 99999999999999999999987777643
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-54 Score=488.98 Aligned_cols=397 Identities=21% Similarity=0.319 Sum_probs=306.2
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
.+.++..+||||.+|+|++++....+|++++++ ||.|+++|+.. ++.++++ ++.+++++.+|+|+
T Consensus 352 ~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~-~~~~~~~~~~G~rv 419 (755)
T TIGR01647 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKV-EEKVDELASRGYRA 419 (755)
T ss_pred cCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHH-HHHHHHHHhCCCEE
Confidence 456778899999999999444333336666665 99999999741 2334443 56788999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
+++|||+- |++|+|+|+++++||+||+++++|++|+++||+++|+|||+..||.++
T Consensus 420 l~vA~~~~------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 420 LGVARTDE------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred EEEEEEcC------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 99999821 358999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|+++||..+ +++|+++... +.......+.+++...+..+|+|++|+||.++|+.+ |..|++|+|+|||
T Consensus 476 A~~lGI~~~-----~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~~VamvGDG 543 (755)
T TIGR01647 476 ARRLGLGTN-----IYTADVLLKG--DNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEIL-----QKRGHLVGMTGDG 543 (755)
T ss_pred HHHcCCCCC-----CcCHHHhcCC--cchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHH-----HhcCCEEEEEcCC
Confidence 999999542 2344443211 011122344566777788899999999999999994 5679999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+|||++|||||||| +|+|+||++||+++.+|+|+.+++++++||++|+|++|++.|.++.|+..+++.+++.++..
T Consensus 544 vNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 544 VNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred cccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999 79999999999999999999999999999999999999999999999998876666554333
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL-LDIP 404 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~ 404 (591)
.|++|+|+||+|+++|. +++++++|++++. ++|. +..+ ..++..++..|++.++..|.++++.... +...
T Consensus 623 -~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 693 (755)
T TIGR01647 623 -FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQ---RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFID 693 (755)
T ss_pred -cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCC---ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 45999999999999996 6999999998752 4443 3333 3667777778888777666665544320 0000
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHH
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFI 470 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~ 470 (591)
..+ ........+|++|.++++.|.++.+++|+.+ ..|+. ..+++++.+.++..++..++
T Consensus 694 -~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~---~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 694 -KFG--LQLLHGNLQSLIYLQVSISGQATIFVTRTHG---FFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred -ccc--ccccHhhhHHHHHHHHHHHHHHHHheeccCC---CCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 000 0112235789999999999999999999754 33433 46666666665555554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=430.60 Aligned_cols=457 Identities=19% Similarity=0.228 Sum_probs=342.9
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+-+|.+++.|||+|+.|||++.|.+..++++..|. +++|++.--.+ .+|+++...+||++|||
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---------------NdWleEE~gNMAREGLR 600 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---------------NDWLEEECGNMAREGLR 600 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---------------chhhhhhhhhhhhhcce
Confidence 35788999999999999999666555578888888 88888754322 23778889999999999
Q ss_pred EEEEEEEecCCCcccccccccCCC-CCCch---------hhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEE
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTE-PNWDD---------EEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMV 154 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~-~~~~~---------~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~ 154 (591)
||++|.|.+++++++.++..+.+. ....+ +..+|+||.++|++|.||+++++|+.+++.||+|||++||+
T Consensus 601 tLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWML 680 (1051)
T KOG0210|consen 601 TLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWML 680 (1051)
T ss_pred EEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEE
Confidence 999999999988876544433211 11111 23689999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCceEEec--------------------------chhhHHhhhcccchhhHHHHhhh-cC
Q psy8116 155 TGDNINTARSIATKCGILKPGDDFLILE--------------------------GKEFNRRVRDANGDVQQHLLDKV-WP 207 (591)
Q Consensus 155 TGd~~~ta~~ia~~~gi~~~~~~~i~l~--------------------------g~~~~~~~~~~~~~~~~~~l~~~-~~ 207 (591)
|||+.+||..||+..++.+.++++.++. |..++-.+. ..++|..+-. -.
T Consensus 681 TGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~----yye~Ef~el~~~~ 756 (1051)
T KOG0210|consen 681 TGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK----YYEDEFIELVCEL 756 (1051)
T ss_pred cCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH----HHHHHHHHHHHhc
Confidence 9999999999999999988766554443 322221111 1122333322 23
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
...++||++|+||+++++.++++ .+..|++||||-||+.|++.||+||++-+++..+|.-|||+.++ .|+.+.+
T Consensus 757 ~aVv~CRctPtQKA~v~~llq~~----t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~r 830 (1051)
T KOG0210|consen 757 PAVVCCRCTPTQKAQVVRLLQKK----TGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSR 830 (1051)
T ss_pred CcEEEEecChhHHHHHHHHHHHh----hCceEEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHH
Confidence 45788999999999999998765 47899999999999999999999999877888899999999999 9999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHhhhhhhhhccCC-CCcccccCC
Q psy8116 288 AVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ---MLWVNLIMDTLASLALATEM-PTPDLLLRK 362 (591)
Q Consensus 288 ~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q---~l~~nli~~~~~~l~l~~~~-~~~~l~~~~ 362 (591)
++. |||+.|.|..+.-+|.+...++...++.++.+...+.|..-+| |+-+..+++.+|.+++..+. .++++....
T Consensus 831 LLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~y 910 (1051)
T KOG0210|consen 831 LLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLY 910 (1051)
T ss_pred HhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhh
Confidence 998 7999999999999999999999999998888777777766554 67788899999999998854 666666667
Q ss_pred CC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhh-hhh
Q psy8116 363 PY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLF-VGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFN-EIN 436 (591)
Q Consensus 363 P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~-~~~ 436 (591)
|. -.+...+|.+.|..|+..++||+.++....+ ....- .....++.|.++++..+.- ++.
T Consensus 911 PELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~e--------------f~~ivaisFtaLi~tELiMVaLt 976 (1051)
T KOG0210|consen 911 PELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDTE--------------FIHIVAISFTALILTELIMVALT 976 (1051)
T ss_pred HHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhhh--------------heEeeeeeeHHHHHHHHHHHhhh
Confidence 73 3455678999999999999999988765422 22111 1123355566655543322 222
Q ss_pred hccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccccCCCh-hHHHHHHHHHHHHHHHHHHHHhhccCccc
Q psy8116 437 ARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKSLTL-EQWLWCLFFGIGTLLWGQVVTTVPTRKLP 514 (591)
Q Consensus 437 ~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~~~l~~-~~w~~~l~~~~~~ll~~eiik~i~~~~~~ 514 (591)
.+.+ +|....+-++++.+.+....+...+|....+.. .+.+...++.++++++..+.|++.|+..|
T Consensus 977 v~tw------------~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 977 VRTW------------HWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred hhhh------------hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 2221 334444555566665555666677776665543 33444456678888899999999877655
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-50 Score=433.49 Aligned_cols=414 Identities=22% Similarity=0.295 Sum_probs=324.6
Q ss_pred cccccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhh
Q psy8116 4 DIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC 80 (591)
Q Consensus 4 ~~~~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 80 (591)
+.|++.+-++.+|||+|+.+||||+|....+.++.+|+ ||.|.+.|+. +..|.. +.++++.|+.
T Consensus 595 ~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p----~tvP~d---------y~evl~~Yt~ 661 (1140)
T KOG0208|consen 595 ECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP----ETVPAD---------YQEVLKEYTH 661 (1140)
T ss_pred cCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc----ccCCcc---------HHHHHHHHHh
Confidence 44566788999999999999999544444456788999 9999999984 332222 4578899999
Q ss_pred ccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy8116 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160 (591)
Q Consensus 81 ~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ 160 (591)
+|+|+||+|+|.++... + ++....+++.+|+||+|+|++.+||+++++++.+|++|++|+|+.+|+||||..
T Consensus 662 ~GfRVIAlA~K~L~~~~---~-----~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 662 QGFRVIALASKELETST---L-----QKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLL 733 (1140)
T ss_pred CCeEEEEEecCccCcch---H-----HHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchh
Confidence 99999999999997641 0 012234678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCceEEec-----------------------------------------------------chhhH
Q psy8116 161 TARSIATKCGILKPGDDFLILE-----------------------------------------------------GKEFN 187 (591)
Q Consensus 161 ta~~ia~~~gi~~~~~~~i~l~-----------------------------------------------------g~~~~ 187 (591)
||..+|++||++.+....+..+ |+.+.
T Consensus 734 TaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~ 813 (1140)
T KOG0208|consen 734 TAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQ 813 (1140)
T ss_pred eeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhH
Confidence 9999999999998755443332 11111
Q ss_pred HhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH
Q psy8116 188 RRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD 267 (591)
Q Consensus 188 ~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~ 267 (591)
... +...++++++..+..||||++|.||.++|+. +|..+..|.|+|||+||+.|||+||+||+.+.+
T Consensus 814 ~i~-----~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~-----lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--- 880 (1140)
T KOG0208|consen 814 VIL-----EHFPELVPKILLKGTVFARMSPDQKAELIEA-----LQKLGYKVGFCGDGANDCGALKAADVGISLSEA--- 880 (1140)
T ss_pred HHH-----hhcHHHHHHHHhcCeEEeecCchhHHHHHHH-----HHhcCcEEEecCCCcchhhhhhhcccCcchhhh---
Confidence 111 2345667788888999999999999999998 567799999999999999999999999999833
Q ss_pred HHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhh
Q psy8116 268 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 347 (591)
Q Consensus 268 ~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l 347 (591)
.|.-||.++..-.+.+++..+|++||+.+.....+++|+..+.++..+..+ .++.....+++.|.|+++++..++.++
T Consensus 881 EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~ 958 (1140)
T KOG0208|consen 881 EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAV 958 (1140)
T ss_pred hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHH
Confidence 445689999988899999999999999999999999999999887766554 455667889999999999999999999
Q ss_pred hhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCCCCCCCCCCCCCcchhhhHHHHH
Q psy8116 348 ALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDK-LLDIPTGRGAEFGSEPTQHFTVIFNTF 426 (591)
Q Consensus 348 ~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~f~~~ 426 (591)
.++..+|..++-..+| +..+++++.+...+++.++..++.+++.+.... -|-.+..++. ..+..+...|.+|.+-
T Consensus 959 ~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~-~~nt~s~~~T~lF~vS 1034 (1140)
T KOG0208|consen 959 MMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQV-DDNTQSSDNTSLFFVS 1034 (1140)
T ss_pred HHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCc-CcccccceeeEeeehh
Confidence 9999999999988888 455999999999999988888887777665432 1111111111 1222344457777766
Q ss_pred HHHHHhhhhhhccccCcccccccCccCHHHHHHH
Q psy8116 427 VFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIW 460 (591)
Q Consensus 427 v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~ 460 (591)
.+..+++++.... ..++.+++|+|+.|+..+
T Consensus 1035 ~fqYi~~a~v~S~---g~pfr~pl~~n~~f~~~i 1065 (1140)
T KOG0208|consen 1035 SFQYIFIALVLSK---GSPFRRPLWKNVLFKVFI 1065 (1140)
T ss_pred HHHHHHhheeecc---CCcccCchhcCceeeeeh
Confidence 6666676665433 225556788888776543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=352.84 Aligned_cols=217 Identities=24% Similarity=0.386 Sum_probs=188.3
Q ss_pred eccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEe
Q psy8116 15 HFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRD 92 (591)
Q Consensus 15 ~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~ 92 (591)
..||+|++|+|+ +.++ |+ .++. ||.+++.|+. +|...+. + +++..++++++|+|+++++
T Consensus 367 ~~pF~~~~k~~g-v~~~---g~-~i~kGa~~~il~~~~~----~g~~~~~--~-----~~~~~~~~a~~G~~~l~v~--- 427 (673)
T PRK14010 367 YIPFTAETRMSG-VKFT---TR-EVYKGAPNSMVKRVKE----AGGHIPV--D-----LDALVKGVSKKGGTPLVVL--- 427 (673)
T ss_pred eeccccccceeE-EEEC---CE-EEEECCHHHHHHHhhh----cCCCCch--H-----HHHHHHHHHhCCCeEEEEE---
Confidence 368899999999 4432 33 3445 9999999984 2322221 1 2345678999999999875
Q ss_pred cCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 93 FVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.|++++|+++++||+|||++++|++|+++||+++|+||||..||.++|+++|+.
T Consensus 428 --------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 428 --------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred --------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 146899999999999999999999999999999999999999999999999993
Q ss_pred CCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhh
Q psy8116 173 KPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPAL 252 (591)
Q Consensus 173 ~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mL 252 (591)
.+++|++|+||.++|+. +|.+|++|+|+|||.||+|+|
T Consensus 482 -------------------------------------~v~A~~~PedK~~iV~~-----lQ~~G~~VaMtGDGvNDAPAL 519 (673)
T PRK14010 482 -------------------------------------RFVAECKPEDKINVIRE-----EQAKGHIVAMTGDGTNDAPAL 519 (673)
T ss_pred -------------------------------------eEEcCCCHHHHHHHHHH-----HHhCCCEEEEECCChhhHHHH
Confidence 27899999999999998 466799999999999999999
Q ss_pred hcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy8116 253 KKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFI 319 (591)
Q Consensus 253 k~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~ 319 (591)
++|||||||| +|+|+||++||+|+.||+|+.+++++++||.+|.|+++++.|.++.|+..++..+.
T Consensus 520 a~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 520 AEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 9999999999 89999999999999999999999999999999999999999999999876655544
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=329.69 Aligned_cols=457 Identities=17% Similarity=0.160 Sum_probs=308.1
Q ss_pred CCcceeeccCCcccceeeeEEeeC-CCC--cEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPR-KGG--GYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~-~~~--~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
++.+...|.|+|..|||||++-.. +++ +|++.+ ||+|-++-... +++ +++...+|+++|
T Consensus 569 ~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv-----------P~d----Y~~iYk~ytR~G 633 (1160)
T KOG0209|consen 569 KLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV-----------PKD----YDEIYKRYTRQG 633 (1160)
T ss_pred ccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC-----------chh----HHHHHHHHhhcc
Confidence 467778888899999999444322 222 366665 99998876532 222 445677899999
Q ss_pred CeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 83 LRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 83 lR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
.||||+|||++..-.. ++....+++++|+||+|.|++.+.-|++++++++|+.+++.+++++|+||||+.||
T Consensus 634 sRVLALg~K~l~~~~~--------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTA 705 (1160)
T KOG0209|consen 634 SRVLALGYKPLGDMMV--------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTA 705 (1160)
T ss_pred ceEEEEecccccccch--------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccch
Confidence 9999999999974321 11122467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCce---------------------------------------EEecchhhHHhhhcccchhhHHHHh
Q psy8116 163 RSIATKCGILKPGDDF---------------------------------------LILEGKEFNRRVRDANGDVQQHLLD 203 (591)
Q Consensus 163 ~~ia~~~gi~~~~~~~---------------------------------------i~l~g~~~~~~~~~~~~~~~~~~l~ 203 (591)
.++|+++|+....-.. +|++|..++... ..+.+.
T Consensus 706 chVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~-------~~~~l~ 778 (1160)
T KOG0209|consen 706 CHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQ-------ATDQLR 778 (1160)
T ss_pred heehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHh-------hhHHHH
Confidence 9999999996541111 122233332221 112455
Q ss_pred hhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH---------------
Q psy8116 204 KVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV--------------- 268 (591)
Q Consensus 204 ~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~--------------- 268 (591)
.+.+.+.||||++|.||-.++.. ++..|..++|+|||+||+.|||+||||||.=++..+.
T Consensus 779 ~l~~hv~VfARvaP~QKE~ii~t-----lK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~ 853 (1160)
T KOG0209|consen 779 RLIPHVWVFARVAPKQKEFIITT-----LKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLE 853 (1160)
T ss_pred HhhhheeEEEeeChhhHHHHHHH-----HHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccC
Confidence 67788899999999999999998 4667999999999999999999999999975433210
Q ss_pred -------------------------------------------------------HHhcccccccCCChhHHHHHHHHHH
Q psy8116 269 -------------------------------------------------------AKEASDIILTDDNFSSIVKAVMWGR 293 (591)
Q Consensus 269 -------------------------------------------------------ak~aad~vl~~~~~~~i~~~i~~gR 293 (591)
|.-||.+...-.+.+++.+.|++||
T Consensus 854 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGR 933 (1160)
T KOG0209|consen 854 PAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGR 933 (1160)
T ss_pred chhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcc
Confidence 0114555555557788999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCH
Q psy8116 294 NVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISK 373 (591)
Q Consensus 294 ~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~ 373 (591)
+..-+.-+++...-...++.. ..++.++.-+.-+++.|...-.+++. ..-+.+...+|-+.+.+.+|.. .++|.
T Consensus 934 ctLVtTlQMfKILALN~LisA--YslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~~---nIFN~ 1007 (1160)
T KOG0209|consen 934 CTLVTTLQMFKILALNCLISA--YSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPLP---NIFNV 1007 (1160)
T ss_pred hhHHHHHHHHHHHHHHHHHHH--HHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCCC---CcchH
Confidence 999888777665433332222 12234555566778888776665544 3445556678999999998843 48899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhh-hhhhccccCcccccccCcc
Q psy8116 374 TMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFN-EINARKIHGQRNVFEGFFS 452 (591)
Q Consensus 374 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~-~~~~r~~~~~~~~f~~~~~ 452 (591)
..+..+++|-.++...++.+.-.....-.-...-...-...|+...|.+|..-...|+.. ++|.+ .+++.+++..
T Consensus 1008 Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~----G~PF~Esl~e 1083 (1160)
T KOG0209|consen 1008 YIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ----GRPFRESLRE 1083 (1160)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc----Ccchhhhhhh
Confidence 888888888877766554443222221111111111112234555566665555555544 33322 3477789999
Q ss_pred CHHHHHHHHHHHHHHHHHHh--h--ccccccccCCChhH----HHHHHHHHHHHHHHHHHHHhhcc
Q psy8116 453 NPIFYSIWFITAASQVFIIQ--F--GREAFSTKSLTLEQ----WLWCLFFGIGTLLWGQVVTTVPT 510 (591)
Q Consensus 453 n~~~~~~~~~~~~~~~~~v~--~--~~~~F~~~~l~~~~----w~~~l~~~~~~ll~~eiik~i~~ 510 (591)
|+.++..++++..+.+.+.. . .+..|...+++-.. ..+.++-.+++++++.+.+++-.
T Consensus 1084 NK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1084 NKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred ccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 98877766655444333321 1 25678888886332 22333334667778887777643
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=330.56 Aligned_cols=250 Identities=30% Similarity=0.425 Sum_probs=198.3
Q ss_pred ceeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEE
Q psy8116 12 PGLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIA 89 (591)
Q Consensus 12 ~v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A 89 (591)
....+||++.+|+|+ +..+ |. .+.. +|.|++.|.. +|...| ++ +++.+++++++|+|++++|
T Consensus 368 ~~~~~pF~s~~~~~g-v~~~---g~-~~~kGa~e~il~~~~~----~g~~~~------~~-~~~~~~~~a~~G~~~l~va 431 (679)
T PRK01122 368 HATFVPFSAQTRMSG-VDLD---GR-EIRKGAVDAIRRYVES----NGGHFP------AE-LDAAVDEVARKGGTPLVVA 431 (679)
T ss_pred cceeEeecCcCceEE-EEEC---CE-EEEECCHHHHHHHHHh----cCCcCh------HH-HHHHHHHHHhCCCcEEEEE
Confidence 456678899999888 4332 32 2222 9999999963 233222 12 2456788999999999999
Q ss_pred EEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy8116 90 YRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC 169 (591)
Q Consensus 90 ~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~ 169 (591)
+ |++++|+++++||+|||++++|++|+++||+++|+||||..||.++|+++
T Consensus 432 ~-----------------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 432 E-----------------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred E-----------------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 3 45799999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCH
Q psy8116 170 GILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDG 249 (591)
Q Consensus 170 gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~ 249 (591)
|+. .+++|++|+||.++|+. +|..|++|+|+|||.||+
T Consensus 483 GId-------------------------------------~v~A~~~PedK~~iV~~-----lQ~~G~~VaMtGDGvNDA 520 (679)
T PRK01122 483 GVD-------------------------------------DFLAEATPEDKLALIRQ-----EQAEGRLVAMTGDGTNDA 520 (679)
T ss_pred CCc-------------------------------------EEEccCCHHHHHHHHHH-----HHHcCCeEEEECCCcchH
Confidence 992 16899999999999999 466799999999999999
Q ss_pred HhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHHHHHhhcc---
Q psy8116 250 PALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV---VAVIVAFIGACA--- 323 (591)
Q Consensus 250 ~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~---~~~~~~~~~~~~--- 323 (591)
|||++|||||||| +|+|+||++||+++.||||+.+++++++||+..-.--....|++..-+ ++++++++...+
T Consensus 521 PALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~ 599 (679)
T PRK01122 521 PALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQL 599 (679)
T ss_pred HHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccc
Confidence 9999999999999 899999999999999999999999999999999777777888877443 244555544332
Q ss_pred ------CCCCchhHHH-HHHHHHH-Hhhhhhhhh
Q psy8116 324 ------VQDSPLKAVQ-MLWVNLI-MDTLASLAL 349 (591)
Q Consensus 324 ------~~~~pl~~~q-~l~~nli-~~~~~~l~l 349 (591)
...+|.+++. -+.+|-+ +..+..++|
T Consensus 600 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (679)
T PRK01122 600 NALNIMHLHSPQSAILSALIFNALIIVALIPLAL 633 (679)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHHhHHHHh
Confidence 2456666654 2334433 333444444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=302.65 Aligned_cols=250 Identities=27% Similarity=0.408 Sum_probs=198.0
Q ss_pred eeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEE
Q psy8116 13 GLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAY 90 (591)
Q Consensus 13 v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~ 90 (591)
....||++.+|+|+ +... +|. .+.. ||.+++.|.. +|...| + + +++.+++++++|+|++++|+
T Consensus 369 ~~~~pf~~~~~~sg-~~~~--~g~-~~~kGa~e~i~~~~~~----~g~~~~--~----~-~~~~~~~~a~~G~r~l~va~ 433 (675)
T TIGR01497 369 ATFVEFTAQTRMSG-INLD--NGR-MIRKGAVDAIKRHVEA----NGGHIP--T----D-LDQAVDQVARQGGTPLVVCE 433 (675)
T ss_pred ceEEEEcCCCcEEE-EEEe--CCe-EEEECCHHHHHHHHHh----cCCCCc--H----H-HHHHHHHHHhCCCeEEEEEE
Confidence 45667799988777 4432 332 3333 9999998862 232222 1 1 34667889999999999994
Q ss_pred EecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC
Q psy8116 91 RDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG 170 (591)
Q Consensus 91 k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g 170 (591)
|.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++|
T Consensus 434 -----------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 434 -----------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred -----------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 237999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHH
Q psy8116 171 ILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGP 250 (591)
Q Consensus 171 i~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~ 250 (591)
+. .+++|++|++|..+++.+ +..++.|+|+|||.||+|
T Consensus 485 I~-------------------------------------~v~a~~~PedK~~~v~~l-----q~~g~~VamvGDG~NDap 522 (675)
T TIGR01497 485 VD-------------------------------------DFIAEATPEDKIALIRQE-----QAEGKLVAMTGDGTNDAP 522 (675)
T ss_pred CC-------------------------------------EEEcCCCHHHHHHHHHHH-----HHcCCeEEEECCCcchHH
Confidence 93 167899999999999985 456889999999999999
Q ss_pred hhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHhhc-----
Q psy8116 251 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVA---VIVAFIGAC----- 322 (591)
Q Consensus 251 mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~---~~~~~~~~~----- 322 (591)
||++||+|+||+ +|++.+|++||+++.||||+.+++++++||+++-+......|++..++.- ++++.+...
T Consensus 523 AL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (675)
T TIGR01497 523 ALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQ 601 (675)
T ss_pred HHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchh
Confidence 999999999999 89999999999999999999999999999999999999999999887643 333333322
Q ss_pred ----cCCCCchhHHH-HHHHHHH-Hhhhhhhhh
Q psy8116 323 ----AVQDSPLKAVQ-MLWVNLI-MDTLASLAL 349 (591)
Q Consensus 323 ----~~~~~pl~~~q-~l~~nli-~~~~~~l~l 349 (591)
....+|-+++. -+.+|-+ +..+..++|
T Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (675)
T TIGR01497 602 ALNIMCLHSPDSAILSALIFNALIIPALIPLAL 634 (675)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHHhHHHHh
Confidence 23456766654 2334433 333444444
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=280.59 Aligned_cols=292 Identities=23% Similarity=0.412 Sum_probs=222.4
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCc-EEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGG-YRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~-~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.+|..++.+|||+..||.+.++.. ++|+ +++-. ||.|++.|.. +.+.+++. .+.+++||++|+|
T Consensus 394 a~ikevhF~PFnPV~Krta~ty~d-~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~v-h~~id~~AeRGlR 460 (942)
T KOG0205|consen 394 AGIKEVHFLPFNPVDKRTALTYID-PDGNWHRVSKGAPEQILKLCNE-----------DHDIPERV-HSIIDKFAERGLR 460 (942)
T ss_pred hCceEEeeccCCccccceEEEEEC-CCCCEEEecCCChHHHHHHhhc-----------cCcchHHH-HHHHHHHHHhcch
Confidence 467788899999999999966665 5665 55555 9999999973 12233344 4789999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
.|++|++..++... +.-.....|+|+.-+-||+|.+..++|++....|..|.|+|||...-++.
T Consensus 461 SLgVArq~v~e~~~----------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~ke 524 (942)
T KOG0205|consen 461 SLAVARQEVPEKTK----------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE 524 (942)
T ss_pred hhhhhhhccccccc----------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHh
Confidence 99999998876431 11124567999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
.++++|+-.+ - ..+.++... +.++.......++...+..-|+.+.|++|+.+|+. +|..++.++|+||
T Consensus 525 Tgrrlgmgtn-m----ypss~llG~--~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~-----Lq~r~hi~gmtgd 592 (942)
T KOG0205|consen 525 TGRRLGMGTN-M----YPSSALLGL--GKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKI-----LQERKHIVGMTGD 592 (942)
T ss_pred hhhhhccccC-c----CCchhhccC--CCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHH-----HhhcCceecccCC
Confidence 9999998431 0 111111100 00111111122333344567888999999999999 5778999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|+||+||+|+|+. +++|.|+.+||+|++....+-++.+++.+|.+|+|++.+..|.++..+-.+ +.|...++.
T Consensus 593 gvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~alI 670 (942)
T KOG0205|consen 593 GVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALI 670 (942)
T ss_pred Ccccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHH
Confidence 999999999999999999 899999999999999999999999999999999999999999888776655 333333333
Q ss_pred CCCchhHHHHHHHHHHHh
Q psy8116 325 QDSPLKAVQMLWVNLIMD 342 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~ 342 (591)
...-++|...+.+-++-|
T Consensus 671 w~~df~pfmvliiailnd 688 (942)
T KOG0205|consen 671 WEFDFSPFMVLIIAILND 688 (942)
T ss_pred HHhcCCHHHHHHHHHhcC
Confidence 344455666665555444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=271.33 Aligned_cols=221 Identities=39% Similarity=0.605 Sum_probs=187.3
Q ss_pred eeccCCcccceeeeEEeeCCCCcEEEEEechhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEec
Q psy8116 14 LHFQLSAARALMKVTVIPRKGGGYRSLPTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDF 93 (591)
Q Consensus 14 ~~fpF~s~rk~msv~v~~~~~~~~~~~~~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~~ 93 (591)
..+||++.+|+|+ ++++.+++.|..-.+|.+++.|.. +.+.+++++.+|+|++++|++.
T Consensus 278 ~~~~f~~~~~~~~-~~~~~~~~~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~~g~~~~~~a~~~- 336 (499)
T TIGR01494 278 NVFEFSSVRKRMS-VIVRGPDGTYVKGAPEFVLSRVKD-------------------LEEKVKELAQSGLRVLAVASKE- 336 (499)
T ss_pred ceeccCCCCceEE-EEEecCCcEEEeCCHHHHHHhhHH-------------------HHHHHHHHHhCCCEEEEEEECC-
Confidence 4568899999999 555543333322128999998852 1233456788999999999643
Q ss_pred CCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy8116 94 VPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILK 173 (591)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~ 173 (591)
+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 337 ----------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-- 386 (499)
T TIGR01494 337 ----------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-- 386 (499)
T ss_pred ----------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--
Confidence 58999999999999999999999999999999999999999999999987
Q ss_pred CCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhh
Q psy8116 174 PGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALK 253 (591)
Q Consensus 174 ~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk 253 (591)
+++.+|++|.++++.+ +..++.|+|+|||.||+||++
T Consensus 387 --------------------------------------~~~~~p~~K~~~v~~l-----~~~g~~v~~vGDg~nD~~al~ 423 (499)
T TIGR01494 387 --------------------------------------FARVTPEEKAALVEAL-----QKKGRVVAMTGDGVNDAPALK 423 (499)
T ss_pred --------------------------------------eeccCHHHHHHHHHHH-----HHCCCEEEEECCChhhHHHHH
Confidence 3578999999999985 455789999999999999999
Q ss_pred cCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHH
Q psy8116 254 KADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ 333 (591)
Q Consensus 254 ~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q 333 (591)
.||+||||+ ++++||+++.++++..+..++.+||..+.++++++.|.+++|++.+.+++++.+
T Consensus 424 ~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~----------- 486 (499)
T TIGR01494 424 KADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV----------- 486 (499)
T ss_pred hCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 999999997 588999999999999999999999999999999999999999998887775431
Q ss_pred HHHHHHHHhhhhhhh
Q psy8116 334 MLWVNLIMDTLASLA 348 (591)
Q Consensus 334 ~l~~nli~~~~~~l~ 348 (591)
+|+++++.++++
T Consensus 487 ---~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ---LNLVPPGLAALA 498 (499)
T ss_pred ---HHHHhcchhhhc
Confidence 777777766543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=270.96 Aligned_cols=160 Identities=39% Similarity=0.539 Sum_probs=151.2
Q ss_pred ccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchh
Q psy8116 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDV 197 (591)
Q Consensus 118 e~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~ 197 (591)
..|-.++|+++++|++||+++++|++|++.|+++.|+||||..+|.++|+++||.
T Consensus 523 a~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------- 577 (713)
T COG2217 523 AVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------- 577 (713)
T ss_pred EECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-------------------------
Confidence 3566899999999999999999999999999999999999999999999999993
Q ss_pred hHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccc
Q psy8116 198 QQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 198 ~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl 277 (591)
.+++...|+||.+.|+.+ +..++.|+|+|||.||+|+|.+|||||||| .|+|+++++||+++
T Consensus 578 ------------~v~AellPedK~~~V~~l-----~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL 639 (713)
T COG2217 578 ------------EVRAELLPEDKAEIVREL-----QAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVL 639 (713)
T ss_pred ------------hheccCCcHHHHHHHHHH-----HhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEE
Confidence 267888999999999995 566899999999999999999999999999 69999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy8116 278 TDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIG 320 (591)
Q Consensus 278 ~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~ 320 (591)
.+++...+.+++.-+|..+.+|++++.|.+.+|++.+.++.++
T Consensus 640 ~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 640 MRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988876
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-26 Score=246.84 Aligned_cols=192 Identities=36% Similarity=0.470 Sum_probs=164.0
Q ss_pred CcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 120 ~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
|-++.|+++++|++|||+..+|..|++.|+++.|+||||..+|+++|+++|+.
T Consensus 711 n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 711 NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 44799999999999999999999999999999999999999999999999972
Q ss_pred HHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccC
Q psy8116 200 HLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~ 279 (591)
.|++...|+||.+.|+.+ +.++..|+|+|||.||+|+|.+||+||||| +|+++|.++||+++..
T Consensus 764 ----------~V~aev~P~~K~~~Ik~l-----q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmr 827 (951)
T KOG0207|consen 764 ----------NVYAEVLPEQKAEKIKEI-----QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMR 827 (951)
T ss_pred ----------eEEeccCchhhHHHHHHH-----HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEc
Confidence 388999999999999995 566799999999999999999999999999 7899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCC---CchhHHHHHHHHHHHhhhhhhhhcc-CCCC
Q psy8116 280 DNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQD---SPLKAVQMLWVNLIMDTLASLALAT-EMPT 355 (591)
Q Consensus 280 ~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~---~pl~~~q~l~~nli~~~~~~l~l~~-~~~~ 355 (591)
++...++.++.-+|+...|++.++.|.+.+|++.+.++.. .++..+ .|.-+...+..+.+-..+-++.|-. ++|.
T Consensus 828 n~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag-vF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 828 NDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG-VFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred cchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee-cccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9999999999999999999999999999999998877753 333333 3333334444555555555555544 4454
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=253.41 Aligned_cols=174 Identities=30% Similarity=0.471 Sum_probs=158.2
Q ss_pred HHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEE
Q psy8116 73 NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVR 152 (591)
Q Consensus 73 ~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~ 152 (591)
+.++++..+|+|++++|+ |.+++|+++++|++||+++++|++|+++|++++
T Consensus 538 ~~~~~~~~~g~~~v~va~-----------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ 588 (741)
T PRK11033 538 GQINELESAGKTVVLVLR-----------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGV 588 (741)
T ss_pred HHHHHHHhCCCEEEEEEE-----------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 456778999999999994 347999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhc
Q psy8116 153 MVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKV 232 (591)
Q Consensus 153 ~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~ 232 (591)
|+|||+..+|.++|+++||. .+++..|++|..+++.+
T Consensus 589 llTGd~~~~a~~ia~~lgi~--------------------------------------~~~~~~p~~K~~~v~~l----- 625 (741)
T PRK11033 589 MLTGDNPRAAAAIAGELGID--------------------------------------FRAGLLPEDKVKAVTEL----- 625 (741)
T ss_pred EEcCCCHHHHHHHHHHcCCC--------------------------------------eecCCCHHHHHHHHHHH-----
Confidence 99999999999999999992 12346799999999985
Q ss_pred CCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy8116 233 SDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 312 (591)
Q Consensus 233 ~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~ 312 (591)
+. ++.|+|+|||.||+|||+.||+||||| ++++.++++||+++.++++..+.+++..||.++.+|++++.|.+.+|++
T Consensus 626 ~~-~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~ 703 (741)
T PRK11033 626 NQ-HAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAI 703 (741)
T ss_pred hc-CCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 357999999999999999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q psy8116 313 AVIVAFIG 320 (591)
Q Consensus 313 ~~~~~~~~ 320 (591)
.+.+++++
T Consensus 704 ~i~~a~~g 711 (741)
T PRK11033 704 FLVTTLLG 711 (741)
T ss_pred HHHHHHHh
Confidence 88877754
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-24 Score=203.84 Aligned_cols=180 Identities=31% Similarity=0.519 Sum_probs=143.6
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPT 405 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (591)
|.|+++.|+||+|+++|++|+++++.|||++++|+|||+++++++++++++..++.+|++++++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999888877765443321
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhh--ccccccccCC
Q psy8116 406 GRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQF--GREAFSTKSL 483 (591)
Q Consensus 406 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~--~~~~F~~~~l 483 (591)
..+ +.....++|++|++++++|+++.+++|+..++...|.+.++|++++.++++++++|+++++. .+.+|++.++
T Consensus 81 ~~~---~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l 157 (182)
T PF00689_consen 81 ETN---NDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPL 157 (182)
T ss_dssp HHH---TTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----
T ss_pred ccc---hhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCC
Confidence 110 00134589999999999999999999986543333358889999999999999999888766 4789999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 484 TLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 484 ~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
++.+|++++.++++.++++|++|++
T Consensus 158 ~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 158 PLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-23 Score=227.80 Aligned_cols=177 Identities=40% Similarity=0.568 Sum_probs=160.9
Q ss_pred HHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcC-CEE
Q psy8116 73 NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAG-ITV 151 (591)
Q Consensus 73 ~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aG-I~v 151 (591)
+.++.++.+|+|++.+|. |.+++|.+.++|+++|+++++|+.|+++| +++
T Consensus 354 ~~~~~~~~~g~~~~~v~~-----------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v 404 (556)
T TIGR01525 354 DLLNEGESQGKTVVFVAV-----------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404 (556)
T ss_pred HHHHHHhhCCcEEEEEEE-----------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeE
Confidence 345668889999999882 34799999999999999999999999999 999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+++|||+..++..+++++|+. .+|++..|++|..+++.+.
T Consensus 405 ~ivTgd~~~~a~~i~~~lgi~-------------------------------------~~f~~~~p~~K~~~v~~l~--- 444 (556)
T TIGR01525 405 VMLTGDNRSAAEAVAAELGID-------------------------------------EVHAELLPEDKLAIVKELQ--- 444 (556)
T ss_pred EEEeCCCHHHHHHHHHHhCCC-------------------------------------eeeccCCHHHHHHHHHHHH---
Confidence 999999999999999999992 1456778999999999854
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
..++.|+|+|||.||++|+++||+|++|| .+++.++++||+++.+++++.+.+++..||+.+.++++++.|.+.+|+
T Consensus 445 --~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~ 521 (556)
T TIGR01525 445 --EEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNL 521 (556)
T ss_pred --HcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q psy8116 312 VAVIVAFIGA 321 (591)
Q Consensus 312 ~~~~~~~~~~ 321 (591)
+.+.+++.+.
T Consensus 522 ~~i~~a~~g~ 531 (556)
T TIGR01525 522 VAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHh
Confidence 9998887664
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=213.75 Aligned_cols=248 Identities=29% Similarity=0.439 Sum_probs=182.1
Q ss_pred eccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEe
Q psy8116 15 HFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRD 92 (591)
Q Consensus 15 ~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~ 92 (591)
..||+++.|+.. + +.+++ ..+.. .+.|.+.-+. .+|. +.++ ++...++-++.|=-.|+++.
T Consensus 372 fvpFtA~TRmSG-v--d~~~~-~~irKGA~dai~~~v~~---~~g~---~p~~-----l~~~~~~vs~~GGTPL~V~~-- 434 (681)
T COG2216 372 FVPFTAQTRMSG-V--DLPGG-REIRKGAVDAIRRYVRE---RGGH---IPED-----LDAAVDEVSRLGGTPLVVVE-- 434 (681)
T ss_pred eeecceeccccc-c--cCCCC-ceeecccHHHHHHHHHh---cCCC---CCHH-----HHHHHHHHHhcCCCceEEEE--
Confidence 347776665554 2 33444 33444 7777766542 2232 1121 34566778889988888872
Q ss_pred cCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 93 FVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
|-.++|++.++|-++|+.+|-+.+||+.||+.+|+||||+.||..||++.|+.
T Consensus 435 ---------------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 435 ---------------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred ---------------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 34689999999999999999999999999999999999999999999999993
Q ss_pred CCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhh
Q psy8116 173 KPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPAL 252 (591)
Q Consensus 173 ~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mL 252 (591)
+ ..+.++|++|.++++. -|..++.|+|+|||+||+|+|
T Consensus 488 d-------------------------------------fiAeatPEdK~~~I~~-----eQ~~grlVAMtGDGTNDAPAL 525 (681)
T COG2216 488 D-------------------------------------FIAEATPEDKLALIRQ-----EQAEGRLVAMTGDGTNDAPAL 525 (681)
T ss_pred h-------------------------------------hhhcCChHHHHHHHHH-----HHhcCcEEEEcCCCCCcchhh
Confidence 1 3467899999999997 578899999999999999999
Q ss_pred hcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHHHHHhhcc------
Q psy8116 253 KKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV---VAVIVAFIGACA------ 323 (591)
Q Consensus 253 k~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~---~~~~~~~~~~~~------ 323 (591)
.+||||+||. +|+..||||+.+|=.|.|...+.+.++-|+...-.=-....|++..-+ ++++++.+...+
T Consensus 526 AqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~l 604 (681)
T COG2216 526 AQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGAL 604 (681)
T ss_pred hhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccce
Confidence 9999999998 899999999999999999999999999998866443333444443322 233333333322
Q ss_pred ---CCCCchhHHH-HHHHHHHH-hhhhhhhh
Q psy8116 324 ---VQDSPLKAVQ-MLWVNLIM-DTLASLAL 349 (591)
Q Consensus 324 ---~~~~pl~~~q-~l~~nli~-~~~~~l~l 349 (591)
...+|-+++. -+.+|-+. ..+..++|
T Consensus 605 NiM~L~sP~SAilSAlIfNAlIIv~LIPLAl 635 (681)
T COG2216 605 NIMHLHSPQSAILSALIFNALIIVALIPLAL 635 (681)
T ss_pred eecccCCcHHHHHHHHHHHHHHHHHhHHHHh
Confidence 3467777654 34455433 33444444
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.3e-23 Score=236.70 Aligned_cols=175 Identities=32% Similarity=0.478 Sum_probs=159.9
Q ss_pred HHHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEE
Q psy8116 72 RNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITV 151 (591)
Q Consensus 72 ~~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v 151 (591)
++.+++++.+|.+++.+|+ |..++|++++.|+++|+++++|++|++.|+++
T Consensus 619 ~~~~~~~~~~g~~~v~va~-----------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v 669 (834)
T PRK10671 619 EAEITAQASQGATPVLLAV-----------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRL 669 (834)
T ss_pred HHHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeE
Confidence 3456778899999999984 22589999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+|+|||+..++..+++++|+. .++++..|++|.++++.+
T Consensus 670 ~~~Tgd~~~~a~~ia~~lgi~-------------------------------------~~~~~~~p~~K~~~i~~l---- 708 (834)
T PRK10671 670 VMLTGDNPTTANAIAKEAGID-------------------------------------EVIAGVLPDGKAEAIKRL---- 708 (834)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-------------------------------------EEEeCCCHHHHHHHHHHH----
Confidence 999999999999999999993 155677899999999984
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
+..++.|+|+|||.||++|++.||+|+||| ++++.++++||+++.+++++++.++++.||..+.+|++++.|.+.+|+
T Consensus 709 -~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~ 786 (834)
T PRK10671 709 -QSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNS 786 (834)
T ss_pred -hhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556889999999999999999999999999 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy8116 312 VAVIVAF 318 (591)
Q Consensus 312 ~~~~~~~ 318 (591)
+.+.+++
T Consensus 787 ~~i~~a~ 793 (834)
T PRK10671 787 LGIPIAA 793 (834)
T ss_pred HHHHHHH
Confidence 9988775
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=224.11 Aligned_cols=163 Identities=34% Similarity=0.532 Sum_probs=150.0
Q ss_pred hccCcEEEEEeeccCCCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc
Q psy8116 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGI-TVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG 195 (591)
Q Consensus 117 ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~ 195 (591)
+..|..++|.+.++|+++|+++++|+.|+++|+ ++.++|||+..++..+++++|+..
T Consensus 347 v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------- 404 (536)
T TIGR01512 347 VARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------- 404 (536)
T ss_pred EEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh----------------------
Confidence 457899999999999999999999999999999 999999999999999999999931
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 275 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~ 275 (591)
++++..|++|..+++.+ +..++.|+|+|||.||++|++.||+|++||.++++.++++||+
T Consensus 405 ---------------~f~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 405 ---------------VHAELLPEDKLEIVKEL-----REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred ---------------hhhccCcHHHHHHHHHH-----HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 34566799999999985 4556899999999999999999999999996689999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy8116 276 ILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA 321 (591)
Q Consensus 276 vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~ 321 (591)
++.+++++.+.+++..||..+.++++++.|.+.+|++.+.++++|.
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV 510 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998888663
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=217.57 Aligned_cols=161 Identities=39% Similarity=0.561 Sum_probs=147.6
Q ss_pred hccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccch
Q psy8116 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGD 196 (591)
Q Consensus 117 ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~ 196 (591)
+..|.+++|.++++|+++|+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 390 ~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------ 445 (562)
T TIGR01511 390 VAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------ 445 (562)
T ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------
Confidence 45688999999999999999999999999999999999999999999999999991
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccccc
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 276 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~v 276 (591)
++++..|++|.+.++.++ .+++.|+|+|||.||++|+++||+|++|| .+++.++++||++
T Consensus 446 --------------~~~~~~p~~K~~~v~~l~-----~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advv 505 (562)
T TIGR01511 446 --------------VRAEVLPDDKAALIKELQ-----EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVV 505 (562)
T ss_pred --------------EEccCChHHHHHHHHHHH-----HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEE
Confidence 234567999999999853 45789999999999999999999999999 6899999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy8116 277 LTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA 321 (591)
Q Consensus 277 l~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~ 321 (591)
+.+++++.+.+++..||..+.++++++.|.+.+|++.+.+++.+.
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999887776443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.1e-21 Score=200.25 Aligned_cols=477 Identities=13% Similarity=0.166 Sum_probs=300.3
Q ss_pred echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEecCCC-------cc-c---------ccc--
Q psy8116 42 TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPG-------KA-E---------INQ-- 102 (591)
Q Consensus 42 ~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~~~~~-------~~-~---------~~~-- 102 (591)
.+.+.+.|+.+|+ +.+..|++..+|.+. ++...+-...| .++++|||+.... ++ + +.-
T Consensus 700 ad~~~eACTdfWd-Gadi~PlSg~dkkkV-~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~c 776 (1354)
T KOG4383|consen 700 ADFFEEACTDFWD-GADIIPLSGRDKKKV-KDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETAC 776 (1354)
T ss_pred HHHHHHHhhhhcC-CceeeecCcchHHHH-HHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhhc
Confidence 6788999999998 678899999888775 34444444445 4999999986311 00 0 000
Q ss_pred --cc------cCCCCCC------------chhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 103 --VH------IDTEPNW------------DDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 103 --~~------~~~~~~~------------~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
.+ +..+..| +..++.-.+.+|.|++..+.+.+++....|+.|.++.|+++..|-++....
T Consensus 777 elp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkS 856 (1354)
T KOG4383|consen 777 ELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKS 856 (1354)
T ss_pred cCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHH
Confidence 00 0000011 111344578999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceEEecch------------------------hhHHhhhcc-cc----------------------
Q psy8116 163 RSIATKCGILKPGDDFLILEGK------------------------EFNRRVRDA-NG---------------------- 195 (591)
Q Consensus 163 ~~ia~~~gi~~~~~~~i~l~g~------------------------~~~~~~~~~-~~---------------------- 195 (591)
+..|.++||...+++.+.+... ++++...++ ++
T Consensus 857 kVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi 936 (1354)
T KOG4383|consen 857 KVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDI 936 (1354)
T ss_pred HHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccch
Confidence 9999999999988888877421 122221111 11
Q ss_pred -------------------hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC--CHHhhhc
Q psy8116 196 -------------------DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN--DGPALKK 254 (591)
Q Consensus 196 -------------------~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N--D~~mLk~ 254 (591)
+.+...+|++..-+..|..++|+.--++++. +|++|++++++|...| ....+-+
T Consensus 937 ~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeI-----MQE~GEVtcclGS~aN~rNSciflk 1011 (1354)
T KOG4383|consen 937 AKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEI-----MQENGEVTCCLGSCANARNSCIFLK 1011 (1354)
T ss_pred hhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHH-----HHHcCcEEEEeccccccccceEEEc
Confidence 0001112223233457889999999999998 5678999999999998 4567788
Q ss_pred CCeeeeeCCC------------ccH------------------HHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy8116 255 ADVGFAMGIA------------GTD------------------VAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQ 304 (591)
Q Consensus 255 A~vGiamg~~------------~~~------------------~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~ 304 (591)
||++||+..- ++. ...-++|+.+.....-.+..+|+.+|.....+++++.
T Consensus 1012 adISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfL 1091 (1354)
T KOG4383|consen 1012 ADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFL 1091 (1354)
T ss_pred cceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 9999987521 111 1112344444444455678889999999999999999
Q ss_pred HHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhh-hccCCCCcccccCCCCCCCCCCCCHHHHHHHHHH-
Q psy8116 305 FQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA-LATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQ- 382 (591)
Q Consensus 305 f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~-l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~- 382 (591)
|.++..+..+++.|++.++..+..++-.+++|.+++..++..++ |...++.+.+|.+...+.-+. |-++.-...+..
T Consensus 1092 FiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqe-IPKk~kh~fllcF 1170 (1354)
T KOG4383|consen 1092 FILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQE-IPKKEKHKFLLCF 1170 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhh-cccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888887 555666666665543222222 222211111111
Q ss_pred ------HHHHHHHHHHHHHH--hhccc---CCCCCC---CCCCCCCCc----------chhhhHHHHHHHHHHhhhhhhc
Q psy8116 383 ------AIYQLTVVFTLLFV--GDKLL---DIPTGR---GAEFGSEPT----------QHFTVIFNTFVFMTLFNEINAR 438 (591)
Q Consensus 383 ------~i~~~~~~~~~~~~--~~~~~---~~~~~~---~~~~~~~~~----------~~~t~~f~~~v~~~~~~~~~~r 438 (591)
++....++|.+... ....- ++.... +......+. .++...-.-++.-.+|..+.
T Consensus 1171 ilkFsls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIT-- 1248 (1354)
T KOG4383|consen 1171 ILKFSLSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQIT-- 1248 (1354)
T ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEE--
Confidence 11122233333221 11111 110000 000000010 01112222234444444443
Q ss_pred cccCcccc-cccCccCHHHHHHH----HHHHHHHHHHHhhc-----cccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 439 KIHGQRNV-FEGFFSNPIFYSIW----FITAASQVFIIQFG-----REAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 439 ~~~~~~~~-f~~~~~n~~~~~~~----~~~~~~~~~~v~~~-----~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
.+|..++. |+..++|.||-+.+ +...+...+..+.+ +.-|+....++..|++..++.+++++.+|++|..
T Consensus 1249 hih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKih 1328 (1354)
T KOG4383|consen 1249 HIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIH 1328 (1354)
T ss_pred EEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHH
Confidence 23433343 34556665543321 11111122223333 4457777778888999888888889999999999
Q ss_pred ccCccccccccCCCCCcchhh
Q psy8116 509 PTRKLPKILSWGRGHPEEYTE 529 (591)
Q Consensus 509 ~~~~~~~~~~~g~~~~~~~~~ 529 (591)
+.|.+.|.+++.+.+.+++..
T Consensus 1329 eIR~~~R~QkRqK~eFdTKLG 1349 (1354)
T KOG4383|consen 1329 EIRQFTREQKRQKFEFDTKLG 1349 (1354)
T ss_pred HHHHHHHHHHhhhheeccccc
Confidence 999999999887777766543
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-15 Score=151.28 Aligned_cols=159 Identities=22% Similarity=0.269 Sum_probs=111.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH----------------------H
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN----------------------R 188 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~----------------------~ 188 (591)
..+.+.+.++|++++++|++|+++|||+...+..+.+++|+..+..+.++.||..+. +
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 98 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTALSYDDYLYLEK 98 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecCCCHHHHHHHHH
Confidence 458999999999999999999999999999999999999985433344544543211 0
Q ss_pred hhhc---------c--------cch-hh-------------------------------------HHHHhhhc----Ccc
Q psy8116 189 RVRD---------A--------NGD-VQ-------------------------------------QHLLDKVW----PRL 209 (591)
Q Consensus 189 ~~~~---------~--------~~~-~~-------------------------------------~~~l~~~~----~~~ 209 (591)
.... . ... .. ......+. ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (270)
T PRK10513 99 LSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAIARIPAEVKERY 178 (270)
T ss_pred HHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHHHHhHHHhcCcE
Confidence 0000 0 000 00 00000000 011
Q ss_pred eEE------EecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 210 RVL------ARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v~------~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.+. ...+| .+|+..++.+++++ +...+.|+++|||.||++||+.|++|+||+ |+.+.+|++||+|+.+++
T Consensus 179 ~~~~s~~~~~eI~~~gvsKg~al~~l~~~~-gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~ 256 (270)
T PRK10513 179 TVLKSAPYFLEILDKRVNKGTGVKSLAEHL-GIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNL 256 (270)
T ss_pred EEEEecCeeEEEeCCCCChHHHHHHHHHHh-CCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCC
Confidence 111 11222 39999999999984 555556667799999999999999999999 688888999999999999
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 257 ~dGva~~i~~ 266 (270)
T PRK10513 257 EDGVAFAIEK 266 (270)
T ss_pred cchHHHHHHH
Confidence 9999988864
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.60 E-value=1e-15 Score=149.17 Aligned_cols=97 Identities=42% Similarity=0.642 Sum_probs=88.4
Q ss_pred CcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 120 ~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
++.++|.+.+.|+++|+++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999992
Q ss_pred HHHhhhcCcceEEEec--ChhhH--HHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC
Q psy8116 200 HLLDKVWPRLRVLARS--SPTDK--YTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD 256 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~--sp~~K--~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~ 256 (591)
+..++++. +|++| ..+++. ++.+++.|+|+|||.||++|+++||
T Consensus 168 --------~~~v~a~~~~kP~~k~~~~~i~~-----l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --------DSIVFARVIGKPEPKIFLRIIKE-----LQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------SEEEEESHETTTHHHHHHHHHHH-----HTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --------cccccccccccccchhHHHHHHH-----HhcCCCEEEEEccCHHHHHHHHhCc
Confidence 22478888 99999 777777 5656669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=146.04 Aligned_cols=156 Identities=14% Similarity=0.136 Sum_probs=108.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH------------------Hhh--
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN------------------RRV-- 190 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~------------------~~~-- 190 (591)
..+.+.+.++|++++++|++|+++|||+...+..+.+++|+.. .+++.||..+. +.+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~ 94 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA---YLITGNGTRVHSLEGELLHRQDLPADVAELVLHQ 94 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC---cEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999842 33444442110 000
Q ss_pred -hcc-----------------cc-----------------------------------hhhH---HHHhhhcC-cceE--
Q psy8116 191 -RDA-----------------NG-----------------------------------DVQQ---HLLDKVWP-RLRV-- 211 (591)
Q Consensus 191 -~~~-----------------~~-----------------------------------~~~~---~~l~~~~~-~~~v-- 211 (591)
... .. +... ..+.+... ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 174 (272)
T PRK15126 95 QWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCF 174 (272)
T ss_pred hhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 000 00 0000 00111111 1111
Q ss_pred ----EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc--cccCCChh
Q psy8116 212 ----LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI--ILTDDNFS 283 (591)
Q Consensus 212 ----~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~--vl~~~~~~ 283 (591)
+...+| .+|+..++.+++++ +...+.|+++|||.||++||+.|++||||| |+.+.+|++||+ ++.+++.+
T Consensus 175 s~~~~~eI~~~g~sKg~al~~l~~~~-gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~ed 252 (272)
T PRK15126 175 SATDCLEVLPVGCNKGAALAVLSQHL-GLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQ 252 (272)
T ss_pred cCCcEEEeecCCCChHHHHHHHHHHh-CCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcch
Confidence 112222 28999999999984 545555666699999999999999999999 688888999996 77788899
Q ss_pred HHHHHHHH
Q psy8116 284 SIVKAVMW 291 (591)
Q Consensus 284 ~i~~~i~~ 291 (591)
++.++|++
T Consensus 253 Gva~~l~~ 260 (272)
T PRK15126 253 AVSHYLTH 260 (272)
T ss_pred HHHHHHHH
Confidence 99988863
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.8e-14 Score=144.29 Aligned_cols=154 Identities=23% Similarity=0.339 Sum_probs=112.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh--------------------hhc
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR--------------------VRD 192 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~--------------------~~~ 192 (591)
+.+.+.++|+++++.|++|+++|||+...+..+.+++++.. .+++.||..+... ...
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLELLED 97 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999953 5556665421110 000
Q ss_pred c----------c------------------------------------------chhhHH---HHhhhcC-cceEEEecC
Q psy8116 193 A----------N------------------------------------------GDVQQH---LLDKVWP-RLRVLARSS 216 (591)
Q Consensus 193 ~----------~------------------------------------------~~~~~~---~l~~~~~-~~~v~~r~s 216 (591)
. . .+...+ .+.+... ....+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~ 177 (264)
T COG0561 98 FQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSG 177 (264)
T ss_pred ccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcC
Confidence 0 0 000000 0111111 122233333
Q ss_pred h---------hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 217 P---------TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 217 p---------~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
+ .+|+.+++.++++ ++...+.|+++||+.||.+||+.|+.||||| ++++.+|+.||++...++.+++.+
T Consensus 178 ~~~lei~~~g~~K~~al~~l~~~-lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~ 255 (264)
T COG0561 178 PISLDITPKGVSKGYALQRLAKL-LGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAE 255 (264)
T ss_pred CceEEEecCCCchHHHHHHHHHH-hCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHH
Confidence 2 3999999999997 4555556666699999999999999999999 569999999999989999999999
Q ss_pred HHHH
Q psy8116 288 AVMW 291 (591)
Q Consensus 288 ~i~~ 291 (591)
+|++
T Consensus 256 ~l~~ 259 (264)
T COG0561 256 ALEK 259 (264)
T ss_pred HHHH
Confidence 9885
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.5e-14 Score=142.91 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=107.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH---------------------Hh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN---------------------RR 189 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~---------------------~~ 189 (591)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+.. .+++.||..+. +.
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~ 94 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS---YMITSNGARVHDTDGNLIFSHNLDRDIASDLFGV 94 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC---eEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHh
Confidence 3588999999999999999999999999999999999999742 23444432110 00
Q ss_pred hhcc----------cc-------hhh---------------------------------HH-------HHhhhc-CcceE
Q psy8116 190 VRDA----------NG-------DVQ---------------------------------QH-------LLDKVW-PRLRV 211 (591)
Q Consensus 190 ~~~~----------~~-------~~~---------------------------------~~-------~l~~~~-~~~~v 211 (591)
.... .. ... .+ .+.+.+ ..+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~ 174 (266)
T PRK10976 95 VHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNV 174 (266)
T ss_pred hcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEE
Confidence 0000 00 000 00 000000 01111
Q ss_pred ------EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc--ccccCCC
Q psy8116 212 ------LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD--IILTDDN 281 (591)
Q Consensus 212 ------~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad--~vl~~~~ 281 (591)
+....| .+|+..++.+++++ +...+.|+++|||.||++||+.|++||||+ |+.+.+|++|| .|+.+++
T Consensus 175 ~~s~~~~~eI~~~gvsKg~al~~l~~~l-gi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~ 252 (266)
T PRK10976 175 SFSTLTCLEVMAGGVSKGHALEAVAKKL-GYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNA 252 (266)
T ss_pred EEeCCceEEEEcCCCChHHHHHHHHHHc-CCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCc
Confidence 112222 28999999999984 555555666699999999999999999999 77888899987 6788889
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 253 edGVa~~l~~ 262 (266)
T PRK10976 253 DDAVPHYLRK 262 (266)
T ss_pred hHHHHHHHHH
Confidence 9999988863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.7e-14 Score=138.38 Aligned_cols=155 Identities=23% Similarity=0.277 Sum_probs=110.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH--------------------hhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR--------------------RVR 191 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~--------------------~~~ 191 (591)
++.+.+.++|++++++|++++++|||+...+..+++.+|+. ...++.+|..+.. ...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS---GPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999984 2344444432110 000
Q ss_pred c-----------ccc---------------hhhHHHHhhhcCcceE-----EEecCh--hhHHHHHHHHHHhhcCCCCcE
Q psy8116 192 D-----------ANG---------------DVQQHLLDKVWPRLRV-----LARSSP--TDKYTLVKGIIDSKVSDSREV 238 (591)
Q Consensus 192 ~-----------~~~---------------~~~~~~l~~~~~~~~v-----~~r~sp--~~K~~~v~~l~~~~~~~~~~~ 238 (591)
. ... +.....+........+ +....| .+|+..++.+++++ +...+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~-~i~~~~ 175 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELM-GIDPEE 175 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHh-CCCHHH
Confidence 0 000 0001111111111111 112223 37999999999984 555566
Q ss_pred EEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 239 VAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 239 va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
++++||+.||.+|++.|++|+||+ ++.+.+|++||+++.+++.+++.++|++
T Consensus 176 ~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 176 VAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 777799999999999999999999 6788889999999999999999998864
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=117.14 Aligned_cols=127 Identities=22% Similarity=0.336 Sum_probs=107.4
Q ss_pred cEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 121 LTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 121 l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
....+.++--.++-++++++|+.|++. +++.++|||..-+....|+..|+.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~---------------------------- 69 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP---------------------------- 69 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc----------------------------
Confidence 456788888899999999999999999 999999999999999999999983
Q ss_pred HHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee-CC-CccHHHHhccccccc
Q psy8116 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM-GI-AGTDVAKEASDIILT 278 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam-g~-~~~~~ak~aad~vl~ 278 (591)
.-++++...|+.|..+++. ++.+++.|.|+|||.||.+||+.||+||+. ++ ..++-+.++||+++.
T Consensus 70 -------~~rv~a~a~~e~K~~ii~e-----Lkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 70 -------VERVFAGADPEMKAKIIRE-----LKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred -------eeeeecccCHHHHHHHHHH-----hcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 2257888899999999998 456789999999999999999999999874 42 344556789999998
Q ss_pred CCChhHHHHHHH
Q psy8116 279 DDNFSSIVKAVM 290 (591)
Q Consensus 279 ~~~~~~i~~~i~ 290 (591)
+...+++++.
T Consensus 138 --~i~e~ldl~~ 147 (152)
T COG4087 138 --EIAEILDLLK 147 (152)
T ss_pred --hHHHHHHHhh
Confidence 6666665543
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=137.32 Aligned_cols=155 Identities=26% Similarity=0.373 Sum_probs=110.0
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhh-H--------------------H
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEF-N--------------------R 188 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~-~--------------------~ 188 (591)
...+.+++.++|++++++|++++++|||+...+..+..++++. .+.++.+|.-+ . .
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~ 89 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILK 89 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheee
Confidence 3458899999999999999999999999999999999999984 45555555432 0 0
Q ss_pred hhhc----------------cc--c---------------------------------------hhhHHHHhhhcCcceE
Q psy8116 189 RVRD----------------AN--G---------------------------------------DVQQHLLDKVWPRLRV 211 (591)
Q Consensus 189 ~~~~----------------~~--~---------------------------------------~~~~~~l~~~~~~~~v 211 (591)
.... .. . +.....+.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~ 169 (254)
T PF08282_consen 90 YLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLID 169 (254)
T ss_dssp HHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEE
T ss_pred hhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCccee
Confidence 0000 00 0 0001111122222112
Q ss_pred EEe-------c--ChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCCh
Q psy8116 212 LAR-------S--SPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 212 ~~r-------~--sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
+.+ . ...+|+.+++.+++++ +...+.++++||+.||.+||+.||+|+||+ ++++..|..||+++..++-
T Consensus 170 ~~~~~~~~lei~~~~vsK~~ai~~l~~~~-~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 170 VVRSSPYFLEITPKGVSKGSAIKYLLEYL-GISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEEETTEEEEEETTSSHHHHHHHHHHHH-TTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTC
T ss_pred EEEecccceEEeeCCCCHHHHHHHHhhhc-ccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCC
Confidence 222 2 2349999999999885 555556666699999999999999999999 6788889999999998888
Q ss_pred hHHHHHH
Q psy8116 283 SSIVKAV 289 (591)
Q Consensus 283 ~~i~~~i 289 (591)
+++.++|
T Consensus 248 ~gv~~~i 254 (254)
T PF08282_consen 248 DGVAKAI 254 (254)
T ss_dssp THHHHHH
T ss_pred ChHHHhC
Confidence 9998765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.50 E-value=6e-13 Score=146.50 Aligned_cols=71 Identities=25% Similarity=0.361 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+|+..++.+++++ +...+.|+++|||.||++||+.|++||||| |+.+.+|++||+|+.+++.+++.++|++
T Consensus 507 SKG~ALk~L~e~l-GI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHL-GVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHc-CCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 8999999999985 555556666699999999999999999999 6888889999999999999999998874
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=134.42 Aligned_cols=154 Identities=22% Similarity=0.268 Sum_probs=107.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh----------hh---------c
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR----------VR---------D 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~----------~~---------~ 192 (591)
.+.+++.++|++++++|++++++|||+...+..+++.+|+. ...++.+|..+... +. .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 48899999999999999999999999999999999999963 33444444321100 00 0
Q ss_pred cc--------------c----------hhhHHHHhhhcCcceE-----EEecCh--hhHHHHHHHHHHhhcCCCCcEEEE
Q psy8116 193 AN--------------G----------DVQQHLLDKVWPRLRV-----LARSSP--TDKYTLVKGIIDSKVSDSREVVAV 241 (591)
Q Consensus 193 ~~--------------~----------~~~~~~l~~~~~~~~v-----~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~ 241 (591)
.. . +.....++.......+ +....| .+|+..++.+++++ +...+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~-~i~~~~~i~ 170 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKL-GIKPGETLV 170 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHh-CCCHHHEEE
Confidence 00 0 0000111111111111 112222 49999999999884 555566777
Q ss_pred ECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH----HHHHHH
Q psy8116 242 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS----IVKAVM 290 (591)
Q Consensus 242 iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~----i~~~i~ 290 (591)
+||+.||++|++.|++|+||+ |+.+.+|+.||+|+.+++.++ +.++|+
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 799999999999999999999 678888999999998888888 666655
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-13 Score=135.42 Aligned_cols=151 Identities=22% Similarity=0.274 Sum_probs=107.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh----hhc--ccc----------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR----VRD--ANG---------- 195 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~----~~~--~~~---------- 195 (591)
++.+++.++|++|+++|++|+++|||+...+..+++.+++.. .+++.+|..+... ... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 488999999999999999999999999999999999998742 3444444321110 000 000
Q ss_pred ------------------------hhhHHHHhhhcCcceE-----EEe--cChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 196 ------------------------DVQQHLLDKVWPRLRV-----LAR--SSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 196 ------------------------~~~~~~l~~~~~~~~v-----~~r--~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+.....+.. ....+ +.. ....+|+..++.++++ ++...+.++++||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~iGD 171 (215)
T TIGR01487 95 FPRDRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVDSGFAIHIMKKGVDKGVGVEKLKEL-LGIKPEEVAAIGD 171 (215)
T ss_pred hhhhhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEecCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECC
Confidence 000001111 01111 111 2235999999999987 4555566778899
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
+.||.+|++.|++|+||+ ++.+.+|+.||+++.+++.+++.++|
T Consensus 172 s~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 172 SENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred CHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999999 68888899999999888888887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.9e-13 Score=135.67 Aligned_cols=72 Identities=26% Similarity=0.351 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++|+||| ++.+..|++||+++.+++.+++.++|++
T Consensus 198 ~~K~~~l~~l~~~~-gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 198 NSKGKRLTQWVEAQ-GWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred CChHHHHHHHHHHc-CCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 38999999999884 555566777799999999999999999999 5677779999999999999999998863
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-12 Score=130.80 Aligned_cols=157 Identities=12% Similarity=0.095 Sum_probs=106.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH-----------------------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR----------------------- 188 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~----------------------- 188 (591)
.+.+.+.++|++|+++|++++++|||....+..+++++|+.. .++++.||..+..
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIR 101 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHH
Confidence 466789999999999999999999999999999999999831 2345555542210
Q ss_pred -h---hhcc-cc---------h---------------------------------hhHHHHhhhcC-cceE-----EEec
Q psy8116 189 -R---VRDA-NG---------D---------------------------------VQQHLLDKVWP-RLRV-----LARS 215 (591)
Q Consensus 189 -~---~~~~-~~---------~---------------------------------~~~~~l~~~~~-~~~v-----~~r~ 215 (591)
. .... .. . ...+..+.+.. .+.+ +...
T Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi 181 (271)
T PRK03669 102 QVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHV 181 (271)
T ss_pred HHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEE
Confidence 0 0000 00 0 00000000000 1111 1122
Q ss_pred Ch--hhHHHHHHHHHHhhcCC---CCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH-----HHhcccccccCCChhHH
Q psy8116 216 SP--TDKYTLVKGIIDSKVSD---SREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV-----AKEASDIILTDDNFSSI 285 (591)
Q Consensus 216 sp--~~K~~~v~~l~~~~~~~---~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~-----ak~aad~vl~~~~~~~i 285 (591)
.| .+|+..++.+++++ +. ..+.|+++|||.||++||+.|++|||||++..+. .+..+|+++....-+++
T Consensus 182 ~~~g~sKg~al~~l~~~l-gi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~ 260 (271)
T PRK03669 182 LDASAGKDQAANWLIATY-QQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGW 260 (271)
T ss_pred ecCCCCHHHHHHHHHHHH-HhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHH
Confidence 22 39999999999985 44 5556666699999999999999999999655331 35589999998889999
Q ss_pred HHHHHH
Q psy8116 286 VKAVMW 291 (591)
Q Consensus 286 ~~~i~~ 291 (591)
.+++++
T Consensus 261 ~~~l~~ 266 (271)
T PRK03669 261 REGLDH 266 (271)
T ss_pred HHHHHH
Confidence 988874
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.7e-12 Score=126.79 Aligned_cols=154 Identities=21% Similarity=0.327 Sum_probs=106.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH---------------------Hh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN---------------------RR 189 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~---------------------~~ 189 (591)
.++.+++.++|++++++|++++++|||+...+..+..++|+.. .+++.||..+. +.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~---~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~ 91 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT---PFITANGAAVIDDQGEILYKKPLDLDLVEEILNF 91 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC---CEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHH
Confidence 3588999999999999999999999999999999999998742 33333332110 00
Q ss_pred hhc-----------------cc-c------------------------------------hhhHHHHhhhc-----Ccce
Q psy8116 190 VRD-----------------AN-G------------------------------------DVQQHLLDKVW-----PRLR 210 (591)
Q Consensus 190 ~~~-----------------~~-~------------------------------------~~~~~~l~~~~-----~~~~ 210 (591)
... .. . +...+..+.+. ..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T TIGR00099 92 LKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVS 171 (256)
T ss_pred HHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEE
Confidence 000 00 0 00000000010 1111
Q ss_pred E------EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCCh
Q psy8116 211 V------LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 211 v------~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
+ +....| .+|+..++.+++. +....+.++++||+.||++|++.|++|+||+ ++.+.+|+.||+++.+++.
T Consensus 172 ~~~s~~~~leI~~~~~~K~~~i~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 172 VVSSGPYSIEITAKGVSKGSALQSLAEA-LGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNE 249 (256)
T ss_pred EEEecCceEEecCCCCChHHHHHHHHHH-cCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCC
Confidence 1 112222 3899999999987 4555567777799999999999999999999 6778889999999998888
Q ss_pred hHHHHHH
Q psy8116 283 SSIVKAV 289 (591)
Q Consensus 283 ~~i~~~i 289 (591)
+++.++|
T Consensus 250 dGV~~~l 256 (256)
T TIGR00099 250 DGVALAL 256 (256)
T ss_pred cchhhhC
Confidence 8887653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-11 Score=124.67 Aligned_cols=155 Identities=16% Similarity=0.143 Sum_probs=102.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH------------------------
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR------------------------ 188 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~------------------------ 188 (591)
..+.+.++|++++++|++++++|||....+..+.+++|+. +..++.||..+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~---~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 93 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE---DPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRA 93 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC---CcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHH
Confidence 4456899999999999999999999999999999999984 2344444431110
Q ss_pred hhh---cc-cc-------hhh-----------------------------HHHHh---hhcC--cceE-----EEecC--
Q psy8116 189 RVR---DA-NG-------DVQ-----------------------------QHLLD---KVWP--RLRV-----LARSS-- 216 (591)
Q Consensus 189 ~~~---~~-~~-------~~~-----------------------------~~~l~---~~~~--~~~v-----~~r~s-- 216 (591)
.+. .. .. ... .+.+. .... .+.+ +....
T Consensus 94 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~ 173 (256)
T TIGR01486 94 RLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGA 173 (256)
T ss_pred HHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecC
Confidence 000 00 00 000 00000 0000 0111 11111
Q ss_pred hhhHHHHHHHHHHhhcCCC--CcEEEEECCCCCCHHhhhcCCeeeeeCCCcc--HHHHhc---ccccccCCChhHHHHHH
Q psy8116 217 PTDKYTLVKGIIDSKVSDS--REVVAVTGDGTNDGPALKKADVGFAMGIAGT--DVAKEA---SDIILTDDNFSSIVKAV 289 (591)
Q Consensus 217 p~~K~~~v~~l~~~~~~~~--~~~va~iGDg~ND~~mLk~A~vGiamg~~~~--~~ak~a---ad~vl~~~~~~~i~~~i 289 (591)
..+|+..++.+++++ +.. .+.++++||+.||.+|++.||+||||+|+.. +..|+. +++|+.+++.+++.+++
T Consensus 174 ~~~Kg~ai~~l~~~~-~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l 252 (256)
T TIGR01486 174 GSDKGKAANALKQFY-NQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREAL 252 (256)
T ss_pred CCCHHHHHHHHHHHH-hhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHH
Confidence 239999999999884 444 5667777999999999999999999995442 456776 45888888999999988
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
++
T Consensus 253 ~~ 254 (256)
T TIGR01486 253 EH 254 (256)
T ss_pred HH
Confidence 74
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.5e-11 Score=116.82 Aligned_cols=150 Identities=18% Similarity=0.239 Sum_probs=101.0
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH-------------------------hhhc
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR-------------------------RVRD 192 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~-------------------------~~~~ 192 (591)
.++++ ++++|++++++|||....+..+..++++..+ +.++..+|..+.. ....
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~-~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSP-DVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCC-CEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 36666 6999999999999999999999999998533 2455566654210 0000
Q ss_pred ccc--------------------h---hhHH---HHhhhcCcceE-EE-----ecCh--hhHHHHHHHHHHhhcCCCCcE
Q psy8116 193 ANG--------------------D---VQQH---LLDKVWPRLRV-LA-----RSSP--TDKYTLVKGIIDSKVSDSREV 238 (591)
Q Consensus 193 ~~~--------------------~---~~~~---~l~~~~~~~~v-~~-----r~sp--~~K~~~v~~l~~~~~~~~~~~ 238 (591)
..+ + ...+ .+........+ .+ ...| .+|+..++.+++++ +...+.
T Consensus 99 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~-g~~~~~ 177 (236)
T TIGR02471 99 IPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRW-GLPLEQ 177 (236)
T ss_pred CCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHh-CCCHHH
Confidence 000 0 0000 11111111111 11 2233 39999999999884 444455
Q ss_pred EEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc----ccccCCChhHHHHHHHH
Q psy8116 239 VAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD----IILTDDNFSSIVKAVMW 291 (591)
Q Consensus 239 va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad----~vl~~~~~~~i~~~i~~ 291 (591)
++++||+.||.+|++.+++||+|+ ++.+..|+.|| ++...++-+++.++|.+
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 667799999999999999999999 57777799999 77777788999998874
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-10 Score=116.49 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=104.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH---------------------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR--------------------- 188 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~--------------------- 188 (591)
.+.+.+++.++|++|+++|++++++|||....+..+++++|+.. ++++.+|..+..
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~ 95 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED---PFIVENGAAIYIPKNYFPFQPDGERLKGDYWVI 95 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC---CEEEEcCcEEEecccccccCCccccccCCceEE
Confidence 34577889999999999999999999999999999999999843 344444432210
Q ss_pred -----------hhh---cc-c-------c----h--------hh--HHHHhhhcC----------------------cce
Q psy8116 189 -----------RVR---DA-N-------G----D--------VQ--QHLLDKVWP----------------------RLR 210 (591)
Q Consensus 189 -----------~~~---~~-~-------~----~--------~~--~~~l~~~~~----------------------~~~ 210 (591)
.+. .. . . + .. ....+.... .+.
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 175 (273)
T PRK00192 96 ELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLK 175 (273)
T ss_pred EcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCE
Confidence 000 00 0 0 0 00 000000000 001
Q ss_pred E-----EEecC-hhhHHHHHHHHHHhhcCCCC-cEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHH----hcc-cccc-
Q psy8116 211 V-----LARSS-PTDKYTLVKGIIDSKVSDSR-EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK----EAS-DIIL- 277 (591)
Q Consensus 211 v-----~~r~s-p~~K~~~v~~l~~~~~~~~~-~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak----~aa-d~vl- 277 (591)
+ +.... +.+|+..++.+++++ +... +.++++||+.||++|++.|++|+||+ |+.+.+| .+| +.+.
T Consensus 176 ~~~~~~~~ei~~~~~Kg~al~~l~~~~-~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~ 253 (273)
T PRK00192 176 VTRGGRFLHLLGGGDKGKAVRWLKELY-RRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFIL 253 (273)
T ss_pred EEECCeEEEEeCCCCHHHHHHHHHHHH-hccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEE
Confidence 0 11111 128999999998874 5555 77778899999999999999999999 6676667 666 6766
Q ss_pred -cCCChhHHHHHHHH
Q psy8116 278 -TDDNFSSIVKAVMW 291 (591)
Q Consensus 278 -~~~~~~~i~~~i~~ 291 (591)
..++-+++.++|.+
T Consensus 254 ~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 254 ASAPGPEGWAEAINK 268 (273)
T ss_pred ecCCCcHHHHHHHHH
Confidence 56678899888863
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-10 Score=119.27 Aligned_cols=134 Identities=21% Similarity=0.292 Sum_probs=99.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..--.+.+ +.+|.- . + .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l-t-------g--------------~ 238 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL-T-------G--------------N 238 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-E-------e--------------E
Confidence 689999999999999999999999999888899999999832101111 111100 0 0 0
Q ss_pred EEE-ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 211 VLA-RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 211 v~~-r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
+.. -...+.|.+.++.+++++ +...+.+.++|||.||++|++.||+|+|| ++.+..++.||.++...+.+++..++
T Consensus 239 v~g~iv~~k~K~~~L~~la~~l-gi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 239 VLGDIVDAQYKADTLTRLAQEY-EIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ecCccCCcccHHHHHHHHHHHc-CCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 000 023468999999998874 44555566669999999999999999999 46777799999999988898887655
Q ss_pred H
Q psy8116 290 M 290 (591)
Q Consensus 290 ~ 290 (591)
-
T Consensus 316 ~ 316 (322)
T PRK11133 316 S 316 (322)
T ss_pred c
Confidence 3
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.06 E-value=7e-10 Score=103.77 Aligned_cols=107 Identities=20% Similarity=0.184 Sum_probs=84.4
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecCh
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP 217 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp 217 (591)
-.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .+ ...
T Consensus 40 ~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---~f----------------------------------~~~-- 80 (169)
T TIGR02726 40 GMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---FH----------------------------------EGI-- 80 (169)
T ss_pred HHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---EE----------------------------------ecC--
Confidence 468999999999999999999999999999999931 10 000
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i 285 (591)
..|...++.++++ ++...+.++++||+.||.+|++.|++++||+ ++.+.+|.+|++|+..++-++.
T Consensus 81 kpkp~~~~~~~~~-l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 81 KKKTEPYAQMLEE-MNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred CCCHHHHHHHHHH-cCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 2344566666665 4556677888899999999999999999999 6777889999999876555443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-09 Score=108.67 Aligned_cols=159 Identities=11% Similarity=0.144 Sum_probs=104.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH---------------------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR--------------------- 188 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~--------------------- 188 (591)
..++.|++.+++++++++|++++++|||....++.+.+++++..++ .+++-+|..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3457789999999999999999999999999999999999986542 344445542210
Q ss_pred ----hhhcccc--------------------hhh---HHHHhhhc----CcceEE-E-----ecCh--hhHHHHHHHHHH
Q psy8116 189 ----RVRDANG--------------------DVQ---QHLLDKVW----PRLRVL-A-----RSSP--TDKYTLVKGIID 229 (591)
Q Consensus 189 ----~~~~~~~--------------------~~~---~~~l~~~~----~~~~v~-~-----r~sp--~~K~~~v~~l~~ 229 (591)
....... +.. ...+.... ....+. + ...| .+|+..++.+++
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 0000000 000 00011111 111111 1 2233 499999999998
Q ss_pred hhcCCCCcEEEEECCCCCCHHhhhc-CCeeeeeCCCccHHHHhccc-------ccccCCChhHHHHHHHH
Q psy8116 230 SKVSDSREVVAVTGDGTNDGPALKK-ADVGFAMGIAGTDVAKEASD-------IILTDDNFSSIVKAVMW 291 (591)
Q Consensus 230 ~~~~~~~~~va~iGDg~ND~~mLk~-A~vGiamg~~~~~~ak~aad-------~vl~~~~~~~i~~~i~~ 291 (591)
.+ +...+.++++||+.||.+|++. ++.|+||+ ++.+..|+.++ ++.....-+++.+++.+
T Consensus 178 ~~-~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 178 KL-AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred Hc-CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 84 5555666777999999999998 67999999 56666565443 66666677888888874
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.7e-09 Score=103.77 Aligned_cols=124 Identities=20% Similarity=0.220 Sum_probs=89.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.++++|.+|+++||-...-+..+++++|+...-.+.+...+..+. -.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt---------------------G~ 134 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT---------------------GR 134 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe---------------------ce
Confidence 789999999999999999999999999999999999999995432222211110110 01
Q ss_pred EE-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccccccc
Q psy8116 211 VL-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278 (591)
Q Consensus 211 v~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~ 278 (591)
+. -.+..+.|...++.+.+.......+.++ +|||.||.|||+.||.++|+. +.+..+..|+....
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 22 2345578999998888774444444554 599999999999999999997 34444556655444
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.4e-09 Score=98.08 Aligned_cols=110 Identities=20% Similarity=0.300 Sum_probs=86.5
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhh
Q psy8116 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTD 219 (591)
Q Consensus 140 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~ 219 (591)
+|+.|++.|+++.++||++...+..+++++|+.. + +.+ ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~----~--~~~---------------------------------~~~ 76 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH----L--YQG---------------------------------QSN 76 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----E--Eec---------------------------------ccc
Confidence 8999999999999999999999999999999831 1 111 134
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH-HHHHHH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS-IVKAVM 290 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~-i~~~i~ 290 (591)
|...++.++++ +....+.++++||+.||.+|++.|+++++|. ++.+..+..||+++..+.-++ +.++++
T Consensus 77 k~~~~~~~~~~-~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 77 KLIAFSDILEK-LALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 66777777766 4556677888899999999999999999999 566778999999998665444 444443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-09 Score=105.04 Aligned_cols=133 Identities=19% Similarity=0.249 Sum_probs=97.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+..--...+..++..+.. .+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~---------------------~~ 143 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG---------------------LV 143 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE---------------------Ee
Confidence 689999999999999999999999999999999999999843111111111100000 00
Q ss_pred EEe-cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHH
Q psy8116 212 LAR-SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r-~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
... ..+..|..+++.+++. ++...+.+.++||+.||++|++.||++++++ +.+..+++||+++.++++..+..+
T Consensus 144 ~~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 144 EGPIVDASYKGKTLLILLRK-EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCcccCCcccHHHHHHHHHH-cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 001 1234578888887776 3444556777899999999999999999986 567788999999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.5e-09 Score=101.70 Aligned_cols=130 Identities=12% Similarity=0.044 Sum_probs=91.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.|+.+++.| ++.++||.....+..+++++|+..--.+-+..++ ..+. ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t-------------------G~-- 125 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-------------------GY-- 125 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE-------------------Ce--
Confidence 68999999999999975 9999999999999999999999421111111111 0000 00
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
. ...+..|...++.+.+ .+..+.++|||.||++|++.||+|+++. +.+.+ +++||=.-.-.+.+.+..++.
T Consensus 126 ~--~~~~~~K~~~l~~l~~-----~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~-~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 126 Q--LRQKDPKRQSVIAFKS-----LYYRVIAAGDSYNDTTMLSEAHAGILFH-APENV-IREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred e--ecCcchHHHHHHHHHh-----hCCCEEEEeCCHHHHHHHHhCCCCEEec-CCHHH-HHhCCCCCcccCHHHHHHHHH
Confidence 0 1346789999988633 2335777799999999999999999998 44445 445544444447888888777
Q ss_pred HH
Q psy8116 291 WG 292 (591)
Q Consensus 291 ~g 292 (591)
+.
T Consensus 197 ~~ 198 (203)
T TIGR02137 197 KA 198 (203)
T ss_pred HH
Confidence 53
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.9e-09 Score=93.47 Aligned_cols=122 Identities=20% Similarity=0.337 Sum_probs=98.4
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChh
Q psy8116 139 DAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPT 218 (591)
Q Consensus 139 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~ 218 (591)
-.|+.+.++||++.++|||+...+..-|+++||.. ...| -.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG---------------------------------~~ 82 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG---------------------------------IS 82 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec---------------------------------hH
Confidence 47899999999999999999999999999999932 1112 35
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC----hhHHHHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 294 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~----~~~i~~~i~~gR~ 294 (591)
+|....+.+++. ++...+.|+++||..||.|++++.+.++|+. ++.+..++.||+|+.... ...+.++|+.++.
T Consensus 83 dK~~a~~~L~~~-~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 83 DKLAAFEELLKK-LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred hHHHHHHHHHHH-hCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 788888888877 5777788889999999999999999999999 667777999999997544 4556667777776
Q ss_pred HHHHHHH
Q psy8116 295 VYDSIAK 301 (591)
Q Consensus 295 ~~~~i~~ 301 (591)
.++...+
T Consensus 161 ~~d~~~~ 167 (170)
T COG1778 161 KLDEALG 167 (170)
T ss_pred cHHHHHh
Confidence 6655443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.9e-08 Score=107.60 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=98.0
Q ss_pred CCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH------------hh---------
Q psy8116 133 VRPEVPDAI-RKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR------------RV--------- 190 (591)
Q Consensus 133 lr~~v~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~------------~~--------- 190 (591)
+.+...+++ +++++.|+.++++|||....+..+.++.++..|+ ..++-+|.++.. .+
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 444455555 8899999999999999999999999999987653 333334432210 00
Q ss_pred ----hcccc--------------------hhhHH---HHhhhc----CcceE------EEecCh--hhHHHHHHHHHHhh
Q psy8116 191 ----RDANG--------------------DVQQH---LLDKVW----PRLRV------LARSSP--TDKYTLVKGIIDSK 231 (591)
Q Consensus 191 ----~~~~~--------------------~~~~~---~l~~~~----~~~~v------~~r~sp--~~K~~~v~~l~~~~ 231 (591)
..... +.... .+.+.. ..+.+ +....| .+|+.+++.|++++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00000 00001 111111 01111 122333 38999999999984
Q ss_pred c--CCCCcEEEEECCCCCCHHhhhcCC-eeeeeCCCccHHHHhcc--------cccc-cCCChhHHHHHHHH
Q psy8116 232 V--SDSREVVAVTGDGTNDGPALKKAD-VGFAMGIAGTDVAKEAS--------DIIL-TDDNFSSIVKAVMW 291 (591)
Q Consensus 232 ~--~~~~~~va~iGDg~ND~~mLk~A~-vGiamg~~~~~~ak~aa--------d~vl-~~~~~~~i~~~i~~ 291 (591)
. +...+.++++||+.||.+||+.|+ +||||+ |+.+..|+.+ +++. .+.+-+++.++|.+
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 1 344556666799999999999999 799999 5666666543 3332 34567788887764
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=97.54 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=88.6
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecCh
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP 217 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp 217 (591)
..+|+.|+++|+++.++||++...+..+++++|+.. + .. ..
T Consensus 54 ~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~----~--f~---------------------------------g~ 94 (183)
T PRK09484 54 GYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH----L--YQ---------------------------------GQ 94 (183)
T ss_pred hHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce----e--ec---------------------------------CC
Confidence 368999999999999999999999999999999832 1 01 12
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC----hhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN----FSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~----~~~i~~~i~~ 291 (591)
++|...++.+++. ++...+.++++||+.||++|++.|+++++++ ++.+..+..||+++..+. ...+.+.+..
T Consensus 95 ~~k~~~l~~~~~~-~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 95 SNKLIAFSDLLEK-LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred CcHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 3467788887776 4556677888899999999999999999987 677788889999986433 3445555543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-08 Score=99.40 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=82.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh-----h-----h--cccch----
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR-----V-----R--DANGD---- 196 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~-----~-----~--~~~~~---- 196 (591)
..+.+.++|++++++|++++++|||+...+..+.+.+|+.. .++++.||..+... . . ....+
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGAAIHLEELWREEPGYPRIILGISYGIIRL 94 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHH
Confidence 44458999999999999999999999999999999999841 35666666533210 0 0 00000
Q ss_pred hhHH--------------------------------HHh---------------------hhcC--cceE-----EEecC
Q psy8116 197 VQQH--------------------------------LLD---------------------KVWP--RLRV-----LARSS 216 (591)
Q Consensus 197 ~~~~--------------------------------~l~---------------------~~~~--~~~v-----~~r~s 216 (591)
..+. ... +... .+.+ +....
T Consensus 95 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~ 174 (221)
T TIGR02463 95 VLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALLADLGLAIVQGNRFSHVL 174 (221)
T ss_pred HHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHHHHcCCeEEecCCeeEEe
Confidence 0000 000 0000 0110 11111
Q ss_pred --hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee
Q psy8116 217 --PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM 261 (591)
Q Consensus 217 --p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam 261 (591)
..+|+..++.+++++ +...+.|+++||+.||.+||+.|++|||+
T Consensus 175 ~~~~~Kg~al~~l~~~l-gi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 175 GASSSKGKAANWLKATY-NQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred cCCCCHHHHHHHHHHHh-CCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 138999999999984 55566677779999999999999999996
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.7e-08 Score=98.06 Aligned_cols=43 Identities=9% Similarity=0.128 Sum_probs=39.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.+...+++.++|++++++|++++++|||....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556778999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF12424 ATP_Ca_trans_C: Plasma membrane calcium transporter ATPase C terminal; InterPro: IPR022141 This domain family is found in eukaryotes, and is approximately 60 amino acids in length | Back alignment and domain information |
|---|
Probab=98.78 E-value=8.7e-10 Score=84.86 Aligned_cols=35 Identities=46% Similarity=0.596 Sum_probs=15.7
Q ss_pred cchhhhhhhccccccceeeeeCCchhhHHHHhhcc
Q psy8116 550 GQILWIRGLTRLQTQVSQPVVDPHLQLCYEVKRRE 584 (591)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (591)
||+||+||+|||||||||||.|.-+.-.++..|+.
T Consensus 1 gq~lw~rgl~r~QtQIrVV~AFrs~l~~~~~~~~~ 35 (66)
T PF12424_consen 1 GQILWFRGLNRIQTQIRVVNAFRSSLSRYEGLRRP 35 (66)
T ss_dssp TCCCHHHHHHHHHHCH-------------------
T ss_pred CCEEEEeCCCccHhHHHHHHHHcCCcccCCccccC
Confidence 89999999999999999999887764334444443
|
The family is found in association with PF00689 from PFAM, PF00122 from PFAM, PF00702 from PFAM, PF00690 from PFAM. There is a conserved QTQ sequence motif. This family is the C-terminal of a calcium transporting ATPase located in the plasma membrane. ; GO: 0005388 calcium-transporting ATPase activity; PDB: 2KNE_B 1CFF_B. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.4e-08 Score=93.30 Aligned_cols=121 Identities=21% Similarity=0.282 Sum_probs=85.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+..--...+..+.. +. ..+. .
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~----------g~--------~~p~--~ 139 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEK----------GF--------IQPD--G 139 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCC----------Ce--------Eecc--e
Confidence 68999999999999999999999999999999999999973210011111100 00 0011 1
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
+....|..|..+++.+++. +....+.+.++||+.||++|++.||++++++ .+....+.|+|
T Consensus 140 ~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 140 IVRVTFDNKGEAVERLKRE-LNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eeEEccccHHHHHHHHHHH-hCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 1223466788888887766 3444556778899999999999999999997 34444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.6e-07 Score=93.92 Aligned_cols=52 Identities=10% Similarity=0.102 Sum_probs=44.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~ 185 (591)
+...+.+.++|++|+++||.|+++||+.......+.+++|+. +.+|+.||..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~---~p~I~eNGA~ 68 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE---HPFICEDGSA 68 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC---CeEEEeCCcE
Confidence 446778999999999999999999999999999999999984 3566666653
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.1e-07 Score=104.93 Aligned_cols=41 Identities=12% Similarity=0.149 Sum_probs=37.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.+.+.+.++|++++++|++++++|||....+..+++++|+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 35578899999999999999999999999999999999973
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.9e-07 Score=94.46 Aligned_cols=151 Identities=12% Similarity=0.229 Sum_probs=91.4
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCceEE-ecch------------hhHHhhhc---
Q psy8116 132 PVRPEVPDAIRKCQR-AGITVRMVTGDNINTARSIATKCGIL--KPGDDFLI-LEGK------------EFNRRVRD--- 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~i~-l~g~------------~~~~~~~~--- 192 (591)
.+.+++.++|++|++ .|++|+++|||+...+..+...+++. ..++..+. .+|. .+...+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 79999999999999999888766631 11111111 0110 00000000
Q ss_pred ---------c-------------cchhhHHHHhh---hcCcceE-----EEecCh--hhHHHHHHHHHHhhcCCCCcEEE
Q psy8116 193 ---------A-------------NGDVQQHLLDK---VWPRLRV-----LARSSP--TDKYTLVKGIIDSKVSDSREVVA 240 (591)
Q Consensus 193 ---------~-------------~~~~~~~~l~~---~~~~~~v-----~~r~sp--~~K~~~v~~l~~~~~~~~~~~va 240 (591)
+ ..+...+.... ......+ +....| .+|+..++.+++++ ....+.++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~-~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEA-PFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhc-CCCCCeEE
Confidence 0 00000111111 1111111 112223 49999999999874 44456677
Q ss_pred EECCCCCCHHhhhcC----CeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 241 VTGDGTNDGPALKKA----DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 241 ~iGDg~ND~~mLk~A----~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
++||+.||.+||+.+ ++||+||++. ..|++.+. +.+.+...+.
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCC--CHHHHHHHHH
Confidence 779999999999999 9999999542 44677776 5565654443
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-05 Score=86.89 Aligned_cols=99 Identities=21% Similarity=0.322 Sum_probs=73.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+. +..+.-++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~~--------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDGT--------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCCc---------------------------
Confidence 47899999999999999999999999999999999999983 222222211
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV 268 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ 268 (591)
.+..|+.|...++. . +.+ +.+.++||+.||.+|++.|+.+++++ .+...
T Consensus 122 -~~~kg~~K~~~l~~---~-l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 122 -TNLKGAAKAAALVE---A-FGE--RGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred -cccCCchHHHHHHH---H-hCc--cCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 02346667665543 2 332 22456699999999999999999998 34433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.7e-07 Score=86.19 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=87.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++ +++.++||.....+..+..++|+...-...+...+.. .+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------------------~i 122 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG------------------------MI 122 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC------------------------eE
Confidence 4689999999999999 9999999999999999999999842111111111110 00
Q ss_pred EE--ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc-cccCCChhHHHHH
Q psy8116 212 LA--RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI-ILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~--r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~-vl~~~~~~~i~~~ 288 (591)
.. ...|..|...++.+. ..+..+.++|||.||.+|.+.|++|++.+. ..+.....++. ++. ++..+.+.
T Consensus 123 ~~~~~~~p~~k~~~l~~~~-----~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~-~~~~~~~~~~~~~~~--~~~el~~~ 194 (205)
T PRK13582 123 TGYDLRQPDGKRQAVKALK-----SLGYRVIAAGDSYNDTTMLGEADAGILFRP-PANVIAEFPQFPAVH--TYDELLAA 194 (205)
T ss_pred ECccccccchHHHHHHHHH-----HhCCeEEEEeCCHHHHHHHHhCCCCEEECC-CHHHHHhCCcccccC--CHHHHHHH
Confidence 00 123667877777642 335678888999999999999999998873 44444455665 444 67777666
Q ss_pred HH
Q psy8116 289 VM 290 (591)
Q Consensus 289 i~ 290 (591)
+.
T Consensus 195 l~ 196 (205)
T PRK13582 195 ID 196 (205)
T ss_pred HH
Confidence 55
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.4e-08 Score=79.99 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=36.1
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccc
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFI 52 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~ 52 (591)
..++.++.++||||+||||+ ||++ .++.+.+|+ ||.||++|+++
T Consensus 45 ~~~~~~~~~~pF~S~rK~ms-vv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 45 RSKYKIVAEIPFDSERKRMS-VVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred HhhcceeEEEccCcccceeE-EEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 45788999999999999999 6665 334577788 99999999864
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.6e-06 Score=86.83 Aligned_cols=54 Identities=20% Similarity=0.285 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECC----CCCCHHhhhcC-CeeeeeCCCccHHHHhcccccc
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGD----GTNDGPALKKA-DVGFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGD----g~ND~~mLk~A-~vGiamg~~~~~~ak~aad~vl 277 (591)
.+|+..++.++++ .+.|+++|| |.||++||+.| -.|++++ ++.+..|..+.+.+
T Consensus 187 vsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4999999998775 355666699 99999999976 4566667 67888788776554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.9e-07 Score=85.44 Aligned_cols=129 Identities=18% Similarity=0.358 Sum_probs=80.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC--CCCCCCceEEecchhh--------HHhh---hc------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG--ILKPGDDFLILEGKEF--------NRRV---RD------ 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i~l~g~~~--------~~~~---~~------ 192 (591)
++.+++.++|++|++.|++++++|||....+..+.+.++ ++..++..+...+... ...+ ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 578999999999999999999999999999999988743 2222222221111100 0000 00
Q ss_pred -ccc-------------------h--hh----HH---HHhhhc---CcceEEE------ecCh--hhHHHHHHHHHHhhc
Q psy8116 193 -ANG-------------------D--VQ----QH---LLDKVW---PRLRVLA------RSSP--TDKYTLVKGIIDSKV 232 (591)
Q Consensus 193 -~~~-------------------~--~~----~~---~l~~~~---~~~~v~~------r~sp--~~K~~~v~~l~~~~~ 232 (591)
... . .. .. .+.... ..+.+.. ...| .+|+..++.+++++
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~- 175 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKEL- 175 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHh-
Confidence 000 0 00 00 011111 1122221 2223 59999999999874
Q ss_pred CCCCcEEEEECCCCCCHHhhhcCCeeeee
Q psy8116 233 SDSREVVAVTGDGTNDGPALKKADVGFAM 261 (591)
Q Consensus 233 ~~~~~~va~iGDg~ND~~mLk~A~vGiam 261 (591)
....+.++++||+.||.+|++.+++||||
T Consensus 176 ~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 176 NGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 44556677789999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-06 Score=81.34 Aligned_cols=112 Identities=19% Similarity=0.270 Sum_probs=78.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+.|++++..+.|++.|.+|.++||--...+..+|.++||...+-+.- .+..+..++..- ++ ...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN--------~l~fd~~Gk~~g--fd----~~~- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYAN--------ELLFDKDGKYLG--FD----TNE- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhh--------eeeeccCCcccc--cc----cCC-
Confidence 478999999999999999999999999999999999999964321110 001111111000 00 000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
.-+....|+++++.+++ ..+...++|+|||.||.+|+..|+.=++.|
T Consensus 153 -ptsdsggKa~~i~~lrk---~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 -PTSDSGGKAEVIALLRK---NYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred -ccccCCccHHHHHHHHh---CCChheeEEecCCccccccCCchhhhhccC
Confidence 01223489999998876 457789999999999999999987656554
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-06 Score=87.79 Aligned_cols=73 Identities=16% Similarity=0.233 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH----HHhccc----ccccCCChhHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV----AKEASD----IILTDDNFSSIVKAV 289 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~----ak~aad----~vl~~~~~~~i~~~i 289 (591)
.+|+.+++.++++......++++ +||+.||.+||..++.||.+||+..+. .....+ +....+.-.+|.+++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~-aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLV-AGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEE-EESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEE-EeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 49999999999985334444544 599999999999999999999665551 222221 344555677788877
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
.|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=7.7e-06 Score=80.38 Aligned_cols=132 Identities=20% Similarity=0.300 Sum_probs=85.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE----EecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL----ILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i----~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.. ..+. ..+.... +... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~--~~~~~~~~~~~~~g~---~~g~-------------~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP--ENIFANQILFGDSGE---YAGF-------------D 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh--hhEEEeEEEEcCCCc---EECc-------------c
Confidence 478999999999999999999999999999999999999942 1111 1110000 0000 0
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhc--CCeeeeeCCCc-cHHHHhcccccccCCChhH
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKK--ADVGFAMGIAG-TDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~--A~vGiamg~~~-~~~ak~aad~vl~~~~~~~ 284 (591)
.... ......|...++.+++.. + .+.++++||+.||+.|.+. ++++++.|... .+.....+|+++. ++..
T Consensus 146 ~~~~--~~~~~~K~~~i~~~~~~~-~--~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~e 218 (224)
T PLN02954 146 ENEP--TSRSGGKAEAVQHIKKKH-G--YKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQD 218 (224)
T ss_pred CCCc--ccCCccHHHHHHHHHHHc-C--CCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHH
Confidence 0000 012345888888876652 2 2467778999999999888 45666655322 2334556888886 6666
Q ss_pred HHHH
Q psy8116 285 IVKA 288 (591)
Q Consensus 285 i~~~ 288 (591)
+.+.
T Consensus 219 l~~~ 222 (224)
T PLN02954 219 LIEV 222 (224)
T ss_pred HHHh
Confidence 6543
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.9e-06 Score=82.47 Aligned_cols=127 Identities=20% Similarity=0.326 Sum_probs=92.7
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
+..+-|++++++..|+++|++..++|+++...+..+.+..|+.. .+-.+-| ....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~---~F~~i~g~~~~~--------------------- 142 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD---YFDVIVGGDDVP--------------------- 142 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc---ccceEEcCCCCC---------------------
Confidence 56789999999999999999999999999999999999999943 3323322 1110
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC---eeeeeCCC-ccHHHHhcccccccCCChhH
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD---VGFAMGIA-GTDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~---vGiamg~~-~~~~ak~aad~vl~~~~~~~ 284 (591)
..+..|.....+++. +....+.++||||+.+|+.|-++|+ +|+..|.+ +.......+|+++. +...
T Consensus 143 ---~~KP~P~~l~~~~~~-----~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~e 212 (220)
T COG0546 143 ---PPKPDPEPLLLLLEK-----LGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAE 212 (220)
T ss_pred ---CCCcCHHHHHHHHHH-----hCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHH
Confidence 012334444444444 2333568999999999999999998 77888853 45566677999988 7777
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+...+.
T Consensus 213 l~~~l~ 218 (220)
T COG0546 213 LLALLA 218 (220)
T ss_pred HHHHHh
Confidence 765543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.3e-06 Score=80.96 Aligned_cols=128 Identities=17% Similarity=0.271 Sum_probs=89.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+...-+. ++.+...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 145 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VIGGDSL------------------------ 145 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EEcCCCC------------------------
Confidence 56899999999999999999999999999999999999998432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeee--CCC-ccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAM--GIA-GTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giam--g~~-~~~~ak~aad~vl~~~~~~~i~ 286 (591)
....| |..+++.+++. ++...+.++++||+.||+.+.+.||+ ++++ |.. ..+.....+++++. ++..+.
T Consensus 146 --~~~kp--~~~~~~~~~~~-~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~ 218 (226)
T PRK13222 146 --PNKKP--DPAPLLLACEK-LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELL 218 (226)
T ss_pred --CCCCc--ChHHHHHHHHH-cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHH
Confidence 01112 23455555555 45566778888999999999999997 4443 322 23444567888875 888888
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
..+.+
T Consensus 219 ~~l~~ 223 (226)
T PRK13222 219 PLLGL 223 (226)
T ss_pred HHHHH
Confidence 77654
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.27 E-value=7.3e-06 Score=80.14 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=84.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE----EecchhhHHhhhcccchhhHHHHhhhc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL----ILEGKEFNRRVRDANGDVQQHLLDKVW 206 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i----~l~g~~~~~~~~~~~~~~~~~~l~~~~ 206 (591)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.. ..+. ..+|..+... .-.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~~~~~~~--------------~p~ 131 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSNEYIHID--------------WPH 131 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeCCeeEEe--------------CCC
Confidence 479999999999999999999999999999999998887542 2221 1222211000 000
Q ss_pred CcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH--HHHhcccccccCCChhH
Q psy8116 207 PRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD--VAKEASDIILTDDNFSS 284 (591)
Q Consensus 207 ~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~--~ak~aad~vl~~~~~~~ 284 (591)
+....+.......|..+++.+. ...+.+.++|||.||.+|++.||+++|=+ .-.+ .....+.... ++|..
T Consensus 132 ~~~~~~~~~cg~~K~~~l~~~~-----~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~d 203 (214)
T TIGR03333 132 PCDGTCQNQCGCCKPSLIRKLS-----EPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYD 203 (214)
T ss_pred CCccccccCCCCCHHHHHHHHh-----hcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHH
Confidence 0000000111346888888753 23456788899999999999999988744 1111 1111232333 37888
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+.+.+.
T Consensus 204 i~~~l~ 209 (214)
T TIGR03333 204 VRKELE 209 (214)
T ss_pred HHHHHH
Confidence 877765
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.8e-06 Score=82.01 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=79.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEe-cchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLIL-EGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
..++.|++.+.|+.+++.|++++++||.....+..+++.+|+..--..-+.. ++..+ .++
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~-------~g~------------ 145 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIY-------TGN------------ 145 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEE-------eCC------------
Confidence 4578999999999999999999999999999999999999984210000111 00000 000
Q ss_pred ceEE-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC
Q psy8116 209 LRVL-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI 263 (591)
Q Consensus 209 ~~v~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~ 263 (591)
+. ..+.++.|...++.+++.. ....+.+.++||+.+|.+|++.|+.++++..
T Consensus 146 --~~~~~~~g~~K~~~l~~~~~~~-~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 146 --IDGNNCKGEGKVHALAELLAEE-QIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred --ccCCCCCChHHHHHHHHHHHHc-CCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 00 1234578888888876652 3344566777999999999999999998873
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.20 E-value=1e-05 Score=78.44 Aligned_cols=126 Identities=20% Similarity=0.285 Sum_probs=86.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|+++|+++.++||.....+....+..|+...-+.. +...+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i--~~~~~~------------------------ 127 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHV--IGSDEV------------------------ 127 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeE--EecCcC------------------------
Confidence 368899999999999999999999999999999999999984211111 111000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee---eeCC-CccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF---AMGI-AGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi---amg~-~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
..+..|..+++.+++. ++...+.++++||+.+|+.+-++||+.+ .-|. ...+..+..+|+++. ++..+.
T Consensus 128 ----~~~KP~~~~~~~~~~~-~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~ 200 (205)
T TIGR01454 128 ----PRPKPAPDIVREALRL-LDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLL 200 (205)
T ss_pred ----CCCCCChHHHHHHHHH-cCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHH
Confidence 0122234455555554 4555677888899999999999999753 3342 223345677898876 677666
Q ss_pred HHH
Q psy8116 287 KAV 289 (591)
Q Consensus 287 ~~i 289 (591)
.++
T Consensus 201 ~~~ 203 (205)
T TIGR01454 201 ALC 203 (205)
T ss_pred HHh
Confidence 544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.5e-05 Score=92.09 Aligned_cols=149 Identities=17% Similarity=0.265 Sum_probs=90.3
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--CCCCCceEEecchhh--------------HHhhhc--
Q psy8116 132 PVRPEVPDAIRKCQR-AGITVRMVTGDNINTARSIATKCGI--LKPGDDFLILEGKEF--------------NRRVRD-- 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~gi--~~~~~~~i~l~g~~~--------------~~~~~~-- 192 (591)
.+.+++.++|++|.+ .|+.|+++|||............++ ...++..+...|.+. ...+..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 6999999999999999887665442 222222221111110 000000
Q ss_pred --ccc-------------------hh-------hHHHHhhhcC--cceEE-------EecChhhHHHHHHHHHHhhcCCC
Q psy8116 193 --ANG-------------------DV-------QQHLLDKVWP--RLRVL-------ARSSPTDKYTLVKGIIDSKVSDS 235 (591)
Q Consensus 193 --~~~-------------------~~-------~~~~l~~~~~--~~~v~-------~r~sp~~K~~~v~~l~~~~~~~~ 235 (591)
..+ +. ....+..... .+.+. .+....+|+.+++.+++. ..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~---~~ 670 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA---GP 670 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc---CC
Confidence 000 00 0011111111 11111 223335999999999873 34
Q ss_pred CcEEEEECCCCCCHHhhhcC---CeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 236 REVVAVTGDGTNDGPALKKA---DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 236 ~~~va~iGDg~ND~~mLk~A---~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+.++++||+.||.+||+.+ +++++||+ + +.+|++.+.+ -+++...+.
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPETAITVKVGP-G----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccCceEEEECC-C----CCcceEeCCC--HHHHHHHHH
Confidence 56788889999999999986 68999994 2 5788898884 355655544
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=78.82 Aligned_cols=132 Identities=18% Similarity=0.211 Sum_probs=82.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEE----ecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLI----LEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~----l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
+++|++.+.++.|++.|+++.++||.....+..+.+++ +.. ..+++ .+|..+.. ..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~----------------~kp 134 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITI----------------TWP 134 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEE----------------ecc
Confidence 68999999999999999999999999999999999988 632 22221 12211100 000
Q ss_pred cceE--EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHH--hcccccccCCChh
Q psy8116 208 RLRV--LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK--EASDIILTDDNFS 283 (591)
Q Consensus 208 ~~~v--~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak--~aad~vl~~~~~~ 283 (591)
.... +.......|..+++.+ +.....+.++|||.||++|.+.||+.+|-+ .-.+.++ ..+.+.+. +|.
T Consensus 135 ~p~~~~~~~~~~~~K~~~l~~~-----~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~--~f~ 206 (219)
T PRK09552 135 HPCDEHCQNHCGCCKPSLIRKL-----SDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPFE--TFH 206 (219)
T ss_pred CCccccccccCCCchHHHHHHh-----ccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccC--CHH
Confidence 0000 0000012477777763 344556788899999999999999977732 1112211 22333333 788
Q ss_pred HHHHHHH
Q psy8116 284 SIVKAVM 290 (591)
Q Consensus 284 ~i~~~i~ 290 (591)
.+.+.+.
T Consensus 207 ei~~~l~ 213 (219)
T PRK09552 207 DVQTELK 213 (219)
T ss_pred HHHHHHH
Confidence 8777664
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.8e-06 Score=80.22 Aligned_cols=96 Identities=27% Similarity=0.297 Sum_probs=68.5
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEe
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLAR 214 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r 214 (591)
+++.+.|+.++++|++++++||.....+..+++.+|+.. ..+++.+. ..+ .......+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~-~~~-------------------~~~~~~~~ 149 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNEL-FDN-------------------GGGIFTGR 149 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEE-ECT-------------------TCCEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEee-eec-------------------ccceeeee
Confidence 677799999999999999999999999999999999942 22222211 100 01122334
Q ss_pred cChh---hHHHHHHHH--HHhhcCCCCcEEEEECCCCCCHHhhh
Q psy8116 215 SSPT---DKYTLVKGI--IDSKVSDSREVVAVTGDGTNDGPALK 253 (591)
Q Consensus 215 ~sp~---~K~~~v~~l--~~~~~~~~~~~va~iGDg~ND~~mLk 253 (591)
.++. .|...++.+ .... ......+.++|||.||.||||
T Consensus 150 ~~~~~~~~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 150 ITGSNCGGKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEESHHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ECCCCCCcHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 4433 499999987 1221 456778888899999999996
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.7e-06 Score=77.48 Aligned_cols=104 Identities=22% Similarity=0.254 Sum_probs=72.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
+++|++.+.++.+++.|++++++||.....+..++..+|+..--...+..+. ..+. ++ ...+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~-------g~--------~~~~-- 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT-------GP--------IEGQ-- 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe-------Cc--------cCCc--
Confidence 3689999999999999999999999999999999999998421111111110 0000 00 0000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA 255 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A 255 (591)
....+..|...++.+++.. ....+.++++|||.||.+|++.|
T Consensus 136 --~~~~~~~K~~~l~~~~~~~-~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 --VNPEGECKGKVLKELLEES-KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred --ccCCcchHHHHHHHHHHHh-CCCHHHEEEEeCCHHHHHHHhcC
Confidence 1234678999999877653 34456677889999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.3e-05 Score=71.23 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=74.0
Q ss_pred eccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 128 GIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 128 ~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
.-..++.+++.+.+++|++.|++++++||+....+....+.+|+....+..+..++...... ..... ...
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~--------~~~ 89 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--KEGLF--------LGG 89 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--ccccc--------ccc
Confidence 44568999999999999999999999999999999999999998433333332222211100 00000 001
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC-eeee
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD-VGFA 260 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~-vGia 260 (591)
....+.+..+..+..+.+. +....+.+.++||+.+|+.|++.++ .+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 90 GPFDIGKPNPDKLLAALKL-----LGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cccccCCCCHHHHHHHHHH-----cCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 1112223334334333333 4455677888899999999999843 4443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.6e-05 Score=74.06 Aligned_cols=115 Identities=18% Similarity=0.161 Sum_probs=74.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+.. .+-.+-+.+.. .+.++ .+.....+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~---~f~~i~~~~~~---~~~~g-----~~~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD---VFIEIYSNPAS---FDNDG-----RHIVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh---heeEEeccCce---ECCCC-----cEEEecCCCC
Confidence 4799999999999999999999999999999999999999842 11111111110 00000 0000001111
Q ss_pred EEEe-cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLAR-SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r-~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.+.. .....|..+++.+++.. .+.+.++|||.||++|.+.||+-+|
T Consensus 140 ~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 140 GCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred ccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCcccc
Confidence 1111 12236888888865431 5678888999999999999988775
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=4e-05 Score=75.26 Aligned_cols=123 Identities=14% Similarity=0.174 Sum_probs=83.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|++.|+++.++||.....+..+.+..|+...-+. ++.+.+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 144 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LASAEKL------------------------ 144 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EEEcccC------------------------
Confidence 46889999999999999999999999999999999999998432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCC---ccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIA---GTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~---~~~~ak~aad~vl~~~~~~~i~ 286 (591)
..+..+..+++.+++. ++...+.++++||+.||+.+.+.||+....-.. ..+.-...+|.++. ++..+.
T Consensus 145 ----~~~Kp~~~~~~~~~~~-~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 145 ----PYSKPHPEVYLNCAAK-LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 0112233456666666 455567788889999999999999976433212 22222345777776 666654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.2e-05 Score=77.65 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=85.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
..++.|++.++++.|+++|+++.++||.+...+..+..+.|+...-+. +..+.+.
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--i~~~d~~----------------------- 153 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--IIGGDTL----------------------- 153 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE--EEecCCC-----------------------
Confidence 346889999999999999999999999999999988888888321111 1111100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-ee--eCCC-ccHHHHhcccccccCCChhHH
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FA--MGIA-GTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-ia--mg~~-~~~~ak~aad~vl~~~~~~~i 285 (591)
.....+..+++.+++. ++...+.++++||+.||+.+.+.||+. ++ .|.. ..+..+..+|+++. ++..+
T Consensus 154 -----~~~Kp~p~~~~~~~~~-~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el 225 (272)
T PRK13223 154 -----PQKKPDPAALLFVMKM-AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRAL 225 (272)
T ss_pred -----CCCCCCcHHHHHHHHH-hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHH
Confidence 0012234455555555 355567777889999999999999963 33 3322 22334457888886 67666
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+++.
T Consensus 226 ~~~~~ 230 (272)
T PRK13223 226 LPGCA 230 (272)
T ss_pred HHHHh
Confidence 65433
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.8e-05 Score=74.93 Aligned_cols=125 Identities=18% Similarity=0.189 Sum_probs=84.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++||.....+..+.+..|+.. .+-.+-+.+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~---~f~~i~~~~~------------------------- 133 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE---FFDVVITLDD------------------------- 133 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh---ceeEEEecCc-------------------------
Confidence 478999999999999999999999999999999999999842 2211111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccH-HHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTD-VAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~-~ak~aad~vl~~~~~~~i~~ 287 (591)
..+ +.-|...++.+++. ++...+.+++|||+.+|+.+-++||+- ++-|....+ .....+|+++. ++..+.+
T Consensus 134 ~~~--~Kp~p~~~~~~~~~-~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~ 208 (214)
T PRK13288 134 VEH--AKPDPEPVLKALEL-LGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLA 208 (214)
T ss_pred CCC--CCCCcHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHH
Confidence 001 11233344444444 455567788889999999999999974 434422222 33446888776 7777766
Q ss_pred HH
Q psy8116 288 AV 289 (591)
Q Consensus 288 ~i 289 (591)
.+
T Consensus 209 ~i 210 (214)
T PRK13288 209 IV 210 (214)
T ss_pred HH
Confidence 54
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.8e-05 Score=74.72 Aligned_cols=123 Identities=15% Similarity=0.190 Sum_probs=82.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+.....+..+.++.|+...-+. ++.+.+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV--LIGGDSL------------------------- 137 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE--EEecCCC-------------------------
Confidence 6899999999999999999999999999999999999998432111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee-e--CCCc-cHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA-M--GIAG-TDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia-m--g~~~-~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.+ +..+..++..+++. ++...+.++++||+.+|+.+.++||+.+. + |... .+.....+|+++. ++..+..
T Consensus 138 -~~--~Kp~p~~~~~~~~~-~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 138 -AQ--RKPHPDPLLLAAER-LGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred -CC--CCCChHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 01 11223445555555 45556668888999999999999997543 3 3211 2233456888776 5655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.3e-05 Score=77.15 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=53.9
Q ss_pred ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC--------CeeeeeCCCccHHHHhcccccccCCChhHH
Q psy8116 214 RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA--------DVGFAMGIAGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 214 r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A--------~vGiamg~~~~~~ak~aad~vl~~~~~~~i 285 (591)
+..+.+|+..++.+++. +......++++||+.||.+|++.+ ++|++|+ .+ ..+..|++++. +.+.+
T Consensus 162 ~p~~~~Kg~a~~~~~~~-~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWH-QPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred eeCCCCHHHHHHHHHHh-cccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 45566999999999887 444556788889999999999998 5788885 22 23567899887 66666
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+.+.
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 66553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.1e-05 Score=73.54 Aligned_cols=127 Identities=16% Similarity=0.157 Sum_probs=84.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+...-+ .++.+.+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~------------------------- 147 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA--VLIGGDTL------------------------- 147 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc--EEEecCcC-------------------------
Confidence 688999999999999999999999999988888888888843111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee---eeCCC-c-cHHHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF---AMGIA-G-TDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi---amg~~-~-~~~ak~aad~vl~~~~~~~i~ 286 (591)
.+ ++.+..++..+++. ++...+.+++|||+.||+.+-+.||+.. .-|.. . .......+|+++. ++..+.
T Consensus 148 -~~--~KP~p~~~~~~~~~-l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~ 221 (229)
T PRK13226 148 -AE--RKPHPLPLLVAAER-IGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLW 221 (229)
T ss_pred -CC--CCCCHHHHHHHHHH-hCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHH
Confidence 00 11122344444444 4556677888899999999999999653 33321 1 1233456888887 777776
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
+.+-|
T Consensus 222 ~~~~~ 226 (229)
T PRK13226 222 NPATW 226 (229)
T ss_pred HHhcC
Confidence 65543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00016 Score=73.39 Aligned_cols=121 Identities=16% Similarity=0.249 Sum_probs=84.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEE-ecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLI-LEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~-l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. ++-. +.+.+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~---~F~~vi~~~~------------------------- 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS---LFSVVQAGTP------------------------- 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh---heEEEEecCC-------------------------
Confidence 678999999999999999999999999999999999999842 2111 11110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccH-HHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTD-VAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~-~ak~aad~vl~~~~~~~i~ 286 (591)
. ..|...+..++++ ++...+.+++|||+.+|+.+-++|++- +.-|....+ .....+|+++. ++..+.
T Consensus 194 -----~-~~k~~~~~~~l~~-~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~ 264 (273)
T PRK13225 194 -----I-LSKRRALSQLVAR-EGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLL 264 (273)
T ss_pred -----C-CCCHHHHHHHHHH-hCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHH
Confidence 0 0133455555555 344556788889999999999999964 333422222 33456888876 777777
Q ss_pred HHH
Q psy8116 287 KAV 289 (591)
Q Consensus 287 ~~i 289 (591)
+.+
T Consensus 265 ~~~ 267 (273)
T PRK13225 265 QAV 267 (273)
T ss_pred HHH
Confidence 654
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.7e-05 Score=78.78 Aligned_cols=68 Identities=16% Similarity=0.112 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHhhcCCCCc--EEEEECCCCCCHHhhhc-----CCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSRE--VVAVTGDGTNDGPALKK-----ADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~--~va~iGDg~ND~~mLk~-----A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+|+..++.+++++.....+ .++++||+.||.+||+. +++||+||+ +... ..|++.+. +-+.+...+.
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~~~--t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VPKE--SNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CCCC--ccceEEcC--CHHHHHHHHH
Confidence 49999999999874322222 24788999999999996 689999994 3332 36788877 6677766665
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00045 Score=69.48 Aligned_cols=143 Identities=14% Similarity=0.190 Sum_probs=87.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-+++|++.+.++.|++.|+++.++||-....+..+.++.|+..+... +.-|--.++. ++... . .+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~-IvSN~L~f~~-----dGvlt-----G-~~~-- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK-VVSNFMDFDE-----DGVLK-----G-FKG-- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce-EEeeeEEECC-----CCeEe-----C-CCC--
Confidence 36899999999999999999999999999999999999998644322 2111111100 00000 0 000
Q ss_pred EEEecChhhHHHHHHH-HHHhhcC--CCCcEEEEECCCCCCHHhhhcCC---eeeeeC--CCcc----HHHHhccccccc
Q psy8116 211 VLARSSPTDKYTLVKG-IIDSKVS--DSREVVAVTGDGTNDGPALKKAD---VGFAMG--IAGT----DVAKEASDIILT 278 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~-l~~~~~~--~~~~~va~iGDg~ND~~mLk~A~---vGiamg--~~~~----~~ak~aad~vl~ 278 (591)
--....+|...+.. ..++ +. .....+.++|||.||++|..-.. .-+.+| +... +.-+++-|+|+.
T Consensus 186 --P~i~~~~K~~~v~~~~~~~-~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 186 --PLIHTFNKNHDVALRNTEY-FNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred --CcccccccHHHHHHHHHHH-hCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 00112467765553 3443 33 44556777799999999966541 112222 2222 234678899998
Q ss_pred CCChhHHHHHHH
Q psy8116 279 DDNFSSIVKAVM 290 (591)
Q Consensus 279 ~~~~~~i~~~i~ 290 (591)
+|.--.++.+|.
T Consensus 263 ~D~t~~v~~~il 274 (277)
T TIGR01544 263 QDETLEVANSIL 274 (277)
T ss_pred CCCCchHHHHHH
Confidence 877666665554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0002 Score=67.76 Aligned_cols=56 Identities=20% Similarity=0.191 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhhcCCCCc-EEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 219 DKYTLVKGIIDSKVSDSRE-VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~-~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
.|+++.+.+++.+.+..+. ++...|||.||+||+...|..+-+++-..+-+...++
T Consensus 191 gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~~lnre~~~lv~~ 247 (274)
T COG3769 191 GKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVKGLNREGVHLVSS 247 (274)
T ss_pred CccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeecccchhhhhcccc
Confidence 5889999888765444443 4888899999999999999999998555555444443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00029 Score=65.29 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=75.5
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCCCCCCceEEecchhhHHhhhcccchhhHHHHh
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR---SIATKC---GILKPGDDFLILEGKEFNRRVRDANGDVQQHLLD 203 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~ 203 (591)
+|.+.+++.+++++++++|++++++|||+...+. ....++ |..-+....+.-+|..+... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~-~------------ 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAAL-H------------ 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhh-h------------
Confidence 5788999999999999999999999999998884 555552 32122344454555433211 0
Q ss_pred hhcCcceEEEecChh-hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 204 KVWPRLRVLARSSPT-DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 204 ~~~~~~~v~~r~sp~-~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
. .+. ...|+ -|...++.+.+..-......++..||+.+|+.+.+++++.
T Consensus 92 ----~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 ----R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 111 22343 4888888887754334567888889999999999988765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00025 Score=70.96 Aligned_cols=117 Identities=11% Similarity=0.051 Sum_probs=78.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-+. ++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~~------------------------ 161 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSECE------------------------ 161 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcCC------------------------
Confidence 5789999999999999999999999999999999999998532121 12221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccHHHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~~ak~aad~vl~~ 279 (591)
.+..+...+...++. ++...+.++++||+.+|+.+-++|++- +.-|....+.....+|+++.+
T Consensus 162 ----~~KP~p~~~~~a~~~-~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 162 ----HAKPHPDPYLKALEV-LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred ----CCCCChHHHHHHHHH-hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 011122333444444 455567788889999999999999964 333322222334468888763
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00023 Score=69.32 Aligned_cols=107 Identities=13% Similarity=0.209 Sum_probs=73.9
Q ss_pred CCCCchHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIR-KCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~-~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.+.|+ .++++|++++++|+.....+..+++..++... ...++. ++.. .+ .+. .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t---~le~--~~-gg~-------------~ 153 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIAS---QIER--GN-GGW-------------V 153 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEE---EeEE--eC-Cce-------------E
Confidence 57999999996 78889999999999999999999998766431 233322 1110 00 010 0
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
.-..+..+.|..-++... ........+=||+.||.|||+.||.++++.
T Consensus 154 ~g~~c~g~~Kv~rl~~~~----~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 154 LPLRCLGHEKVAQLEQKI----GSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred cCccCCChHHHHHHHHHh----CCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 112356678888777643 222333434499999999999999999987
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0006 Score=69.01 Aligned_cols=127 Identities=9% Similarity=0.078 Sum_probs=82.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-|++.++|+.|++.|+++.++||.....+..+.+..|+....... ++.+.+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~-i~~~~~~~------------------------ 155 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDH-VVTTDDVP------------------------ 155 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceE-EEcCCcCC------------------------
Confidence 57899999999999999999999999999988888887764321111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCcEEEEECCCCCCHHhhhcCCe---eeeeCCCc----------------------
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSD-SREVVAVTGDGTNDGPALKKADV---GFAMGIAG---------------------- 265 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~-~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~---------------------- 265 (591)
...| +..++...++. ++. ..+.+++|||+.+|+.+-+.||+ |+.-|...
T Consensus 156 --~~KP--~p~~~~~a~~~-l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T PRK13478 156 --AGRP--YPWMALKNAIE-LGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRER 230 (267)
T ss_pred --CCCC--ChHHHHHHHHH-cCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHH
Confidence 0112 22333444444 343 34678888999999999999995 45444221
Q ss_pred --cHHHHhcccccccCCChhHHHHHHH
Q psy8116 266 --TDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 266 --~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+....-+|+++. ++..+...+.
T Consensus 231 ~~~~l~~~~a~~vi~--~~~~l~~~l~ 255 (267)
T PRK13478 231 ARARLRAAGAHYVID--TIADLPAVIA 255 (267)
T ss_pred HHHHHHHcCCCeehh--hHHHHHHHHH
Confidence 1223445788876 6777766553
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00041 Score=67.65 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=74.4
Q ss_pred CCCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAI-RKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.+.| +.+++.|++++++|+.....+..++..+|+.. .+..++.+ +... ..++.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~---l~~~---~tg~~------------- 154 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQ---MQRR---YGGWV------------- 154 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEE---EEEE---EccEE-------------
Confidence 5689999999 57888999999999999999999999999632 23333322 1100 00000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
.-..+..+.|...++... ........+=||+.||.|||+.|+.+++++
T Consensus 155 ~g~~c~g~~K~~~l~~~~----~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 155 LTLRCLGHEKVAQLERKI----GTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCccCCChHHHHHHHHHh----CCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 012356678888777642 223334434499999999999999999987
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00045 Score=69.24 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=66.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+.++.|+...-... ++.+.+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~-ii~~~~~~------------------------ 153 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDY-NVTTDDVP------------------------ 153 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCce-EEccccCC------------------------
Confidence 57899999999999999999999999999999999999985321111 12221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCcEEEEECCCCCCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSD-SREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~-~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
...|. ..+....++. +.. ..+.+++|||+.+|+.+-+.||+.
T Consensus 154 --~~KP~--p~~~~~a~~~-l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 154 --AGRPA--PWMALKNAIE-LGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred --CCCCC--HHHHHHHHHH-cCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 01121 2233333333 343 356788889999999999999953
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00034 Score=68.48 Aligned_cols=125 Identities=21% Similarity=0.263 Sum_probs=82.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL--KPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
.++.||+.+.++.|++.|+++.++||.....+..+.+..|+. ..-+. ++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~--i~~~~~~~--------------------- 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDA--VVCPSDVA--------------------- 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCE--EEcCCcCC---------------------
Confidence 479999999999999999999999999999999999999985 21111 11111100
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCC-CcEEEEECCCCCCHHhhhcCCeeee--eC--CCcc-HHHHhcccccccCCCh
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDS-REVVAVTGDGTNDGPALKKADVGFA--MG--IAGT-DVAKEASDIILTDDNF 282 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~-~~~va~iGDg~ND~~mLk~A~vGia--mg--~~~~-~~ak~aad~vl~~~~~ 282 (591)
+..| +..+....+++ +... .+.++++||+.+|+.+-++||+..+ +. .... +.....+|.++. ++
T Consensus 143 -----~~KP--~p~~~~~a~~~-~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~ 212 (220)
T TIGR03351 143 -----AGRP--APDLILRAMEL-TGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SV 212 (220)
T ss_pred -----CCCC--CHHHHHHHHHH-cCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CH
Confidence 0112 33344444444 3443 4788888999999999999998862 32 1111 222345677665 56
Q ss_pred hHHHHH
Q psy8116 283 SSIVKA 288 (591)
Q Consensus 283 ~~i~~~ 288 (591)
..+..+
T Consensus 213 ~~l~~~ 218 (220)
T TIGR03351 213 ADLPAL 218 (220)
T ss_pred HHHHHh
Confidence 655443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00048 Score=80.18 Aligned_cols=153 Identities=16% Similarity=0.207 Sum_probs=88.7
Q ss_pred CCCCCchHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH---cCCCCCCCceEEecchh------------hHHhhh---
Q psy8116 131 DPVRPEVPDAIRKC-QRAGITVRMVTGDNINTARSIATK---CGILKPGDDFLILEGKE------------FNRRVR--- 191 (591)
Q Consensus 131 d~lr~~v~~~I~~l-~~aGI~v~~~TGd~~~ta~~ia~~---~gi~~~~~~~i~l~g~~------------~~~~~~--- 191 (591)
-.+.+++.+++++| ++.|+.|+++|||...+....... +++...++..+...|.. ..+.+.
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~ 694 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVM 694 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHH
Confidence 35678999999997 778999999999999999987754 34544444433222210 000000
Q ss_pred -----cccc-------------------hhh----HHH---HhhhcCc--ce-------EEEecChhhHHHHHHHHHHhh
Q psy8116 192 -----DANG-------------------DVQ----QHL---LDKVWPR--LR-------VLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 192 -----~~~~-------------------~~~----~~~---l~~~~~~--~~-------v~~r~sp~~K~~~v~~l~~~~ 231 (591)
...+ +.. .+. +...... .. +=.+..-.+|+.+++.+++..
T Consensus 695 ~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~ 774 (854)
T PLN02205 695 QLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIM 774 (854)
T ss_pred HHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 0000 000 011 1111111 11 112333349999999987531
Q ss_pred --cCCCCcEEEEECCCCCCHHhhhcCC--------------eeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 232 --VSDSREVVAVTGDGTNDGPALKKAD--------------VGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 232 --~~~~~~~va~iGDg~ND~~mLk~A~--------------vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.....+.++++||+.||.+||+.++ ++|.+|. + ..+|.+-+. +.+.+.+++.
T Consensus 775 ~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~-~----~S~A~y~L~--d~~eV~~lL~ 842 (854)
T PLN02205 775 QERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ-K----PSKAKYYLD--DTAEIVRLMQ 842 (854)
T ss_pred HhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC-C----CccCeEecC--CHHHHHHHHH
Confidence 2334456788899999999999875 5667773 2 245566665 5566665554
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0005 Score=69.27 Aligned_cols=122 Identities=11% Similarity=0.126 Sum_probs=81.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d~~------------------------ 162 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAEDVY------------------------ 162 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEecccCC------------------------
Confidence 5789999999999999999999999999999999999998432121 12221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee-eeCCCccHHHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF-AMGIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi-amg~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
+..| +..+....+++ ++...+.+++|||+.+|+.+-+.||+.+ ++.+..+......+|+++. +++.+.
T Consensus 163 --~~KP--~Pe~~~~a~~~-l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 163 --RGKP--DPEMFMYAAER-LGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred --CCCC--CHHHHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 0112 23344444444 4556677888899999999999999742 3332232322345777766 555554
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0011 Score=64.77 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.. .+ .++.+.+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~--~i~~~~~~~------------------------ 135 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PE--VFVTAERVK------------------------ 135 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-cc--EEEEHHHhc------------------------
Confidence 578999999999999999999999988777777777777732 11 122222110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccHHHHhccccccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTDVAKEASDIILT 278 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~~ak~aad~vl~ 278 (591)
+..|. .......++. ++...+.++++||+.+|+.+-+.||+. +++...........+|+++.
T Consensus 136 --~~KP~--p~~~~~~~~~-~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 136 --RGKPE--PDAYLLGAQL-LGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred --CCCCC--cHHHHHHHHH-cCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 01121 2223333333 455667788889999999999999974 55542222222345677665
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0018 Score=61.61 Aligned_cols=150 Identities=17% Similarity=0.217 Sum_probs=93.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE--Eecch--------hhHHhhh---cccchhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL--ILEGK--------EFNRRVR---DANGDVQ 198 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i--~l~g~--------~~~~~~~---~~~~~~~ 198 (591)
++-|++.++++.+++.= ..+++|-.-..-+..+|.-+|+...+-+.. .++.. ++-..+. +.+++..
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 57799999999998764 455556667778889999999854321111 11100 0100000 1111211
Q ss_pred HHHHhhhcCcceEEEecCh---------------hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC-ee-eee
Q psy8116 199 QHLLDKVWPRLRVLARSSP---------------TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD-VG-FAM 261 (591)
Q Consensus 199 ~~~l~~~~~~~~v~~r~sp---------------~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~-vG-iam 261 (591)
-+.+|. +|.|..| ..|..+++.+++.. ......+++||+..|..||+.+. -| +|+
T Consensus 162 fe~lDe------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele--~~d~sa~~VGDSItDv~ml~~~rgrGglAv 233 (315)
T COG4030 162 FEKLDE------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELE--GIDFSAVVVGDSITDVKMLEAARGRGGLAV 233 (315)
T ss_pred HHHHHH------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhc--CCCcceeEecCcccchHHHHHhhccCceEE
Confidence 222222 2333333 37888888888853 44444677899999999999875 33 777
Q ss_pred CCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 262 GIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 262 g~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.-||.+-+...||+.+...+.......|.
T Consensus 234 aFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 234 AFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred EecCCcccccccceEEeccchhhhhHHHH
Confidence 77788888888998888777777666665
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0016 Score=58.29 Aligned_cols=92 Identities=24% Similarity=0.250 Sum_probs=67.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN--------INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLD 203 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~ 203 (591)
++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+. .......+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP---IDVLYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC---EEEEEECC--------------------
Confidence 578999999999999999999999998 77788888888873 11111111
Q ss_pred hhcCcceEEEecChhhHHHHHHHHHHhhc-CCCCcEEEEECC-CCCCHHhhhcCCee
Q psy8116 204 KVWPRLRVLARSSPTDKYTLVKGIIDSKV-SDSREVVAVTGD-GTNDGPALKKADVG 258 (591)
Q Consensus 204 ~~~~~~~v~~r~sp~~K~~~v~~l~~~~~-~~~~~~va~iGD-g~ND~~mLk~A~vG 258 (591)
..+..|.++++.+++. + ....+.++++|| ..+|+.+-+.+|+-
T Consensus 82 -----------~~~KP~~~~~~~~~~~-~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 -----------HCRKPKPGMFLEALKR-FNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -----------CCCCCChHHHHHHHHH-cCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 0112244566666665 4 256677888899 69999999999864
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=67.89 Aligned_cols=68 Identities=16% Similarity=0.130 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHhhcCC--CCcEEEEECCCCCCHHhhhcC-----CeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSD--SREVVAVTGDGTNDGPALKKA-----DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~--~~~~va~iGDg~ND~~mLk~A-----~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
-+|+.+++.|++.+.-. ....++++||...|-.|++.. ++||.+|.... ..+|++.+. +.+.+.+.+.
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~--dp~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQ--DPSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCC--CHHHHHHHHH
Confidence 49999999998863211 234688889999999999865 47777873211 357888886 6777766554
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0027 Score=66.95 Aligned_cols=123 Identities=14% Similarity=0.102 Sum_probs=81.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.||+.+.++.|+++|+++.++|+.+...+..+.+..||..--+. ++.+.+..
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~sddv~----------------------- 269 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVAAEDVY----------------------- 269 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEecCcCC-----------------------
Confidence 35789999999999999999999999999999999999998431111 11111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
+..| +..+....++. ++...+.++++||+.+|+.+-+.|++- |++...........+|+++. ++..+.
T Consensus 270 ---~~KP--~Peifl~A~~~-lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL~ 338 (381)
T PLN02575 270 ---RGKP--DPEMFIYAAQL-LNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDELS 338 (381)
T ss_pred ---CCCC--CHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHHH
Confidence 1112 23344444444 456677788889999999999999964 33332111222235787766 666553
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0017 Score=63.40 Aligned_cols=100 Identities=15% Similarity=0.172 Sum_probs=69.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|++++++|+.+...+....+.+|+...-+.. +.+.+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i--~~~~~~------------------------- 146 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAV--ITSEEE------------------------- 146 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEE--EEeccC-------------------------
Confidence 68899999999999999999999999988888888999884321111 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee-eeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG-FAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg 262 (591)
.+..| +..+.+.+++. +....+.++++||+. +|+.+-++||+- |.+.
T Consensus 147 -~~~KP--~~~~~~~~~~~-~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 147 -GVEKP--HPKIFYAALKR-LGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred -CCCCC--CHHHHHHHHHH-cCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 01112 22334444444 455567788889998 999999999963 4443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0022 Score=70.23 Aligned_cols=124 Identities=15% Similarity=0.178 Sum_probs=82.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.. +.+.+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i--~~~d~v------------------------- 382 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTET--FSIEQI------------------------- 382 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhccee--EecCCC-------------------------
Confidence 68899999999999999999999999999999999999984321211 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCC-CccHHHHhcccccccCCChhHHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGI-AGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~-~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
.+..|...+...++. +. .+.+.++||+.+|+.+-+.|++- |++.. ...+.....+|+++. ++..+.+.+
T Consensus 383 ----~~~~kP~~~~~al~~-l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 383 ----NSLNKSDLVKSILNK-YD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred ----CCCCCcHHHHHHHHh-cC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 001122344444443 22 35688889999999999999963 33321 112222345788876 777777665
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
.+
T Consensus 454 ~~ 455 (459)
T PRK06698 454 ST 455 (459)
T ss_pred HH
Confidence 43
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0014 Score=67.11 Aligned_cols=118 Identities=15% Similarity=0.171 Sum_probs=73.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..+...-.+.+..+.+.+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~------------------------ 199 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP------------------------ 199 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC------------------------
Confidence 68899999999999999999999999988888777665322111111112221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCcc--HHHHhccccccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGT--DVAKEASDIILT 278 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~--~~ak~aad~vl~ 278 (591)
. +..+..+...+++. ++...+.+++|||+.+|+.+-+.||+.+..-..+. ......+|+++.
T Consensus 200 --~--~KP~p~~~~~a~~~-~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 200 --K--KKPDPDIYNLAAET-LGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred --C--CCCCHHHHHHHHHH-hCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 0 11222334444444 45556778888999999999999997644321221 111235777765
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0032 Score=62.87 Aligned_cols=34 Identities=18% Similarity=0.416 Sum_probs=28.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
.++.+++.++|++|++. ++++++|||........
T Consensus 23 ~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~ 56 (245)
T PLN02423 23 KEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQ 56 (245)
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHH
Confidence 35889999999999976 99999999987766543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0016 Score=64.02 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=69.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|+++|+++.++|+.+...+....+..|+..--+. ++ .+.+.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~-iv-~s~~~------------------------ 145 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDL-LL-STHTF------------------------ 145 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCE-EE-EeeeC------------------------
Confidence 36789999999999999999999999988888888888887431111 11 11110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
. .++-+..+...+++. ++...+.++++||+.+|+.+-+.||+..
T Consensus 146 --~--~~KP~p~~~~~~~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 146 --G--YPKEDQRLWQAVAEH-TGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred --C--CCCCCHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0 112233455555554 4556677888899999999999999863
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0017 Score=62.38 Aligned_cols=94 Identities=19% Similarity=0.124 Sum_probs=63.7
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+...-+..+. +.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~--~~~------------------------ 157 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW--MED------------------------ 157 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe--ecC------------------------
Confidence 455677789999999999999999999999999999999998432221111 111
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA 255 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A 255 (591)
+..+..|+. +...++. ++...+.++++||+.+|+.+-++|
T Consensus 158 -~~~KP~p~~----~~~~~~~-~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 -CPPKPNPEP----LILAAKA-LGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -CCCCcCHHH----HHHHHHH-hCcCcccEEEEeCCHHHHHHHHhC
Confidence 000223332 2333333 345566788889999999887764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0021 Score=61.72 Aligned_cols=97 Identities=16% Similarity=0.262 Sum_probs=67.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+-+...+....+.+|+...-+.. +...+..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i--~~s~~~~------------------------ 145 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAV--LSADAVR------------------------ 145 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhee--EehhhcC------------------------
Confidence 57899999999999999999999999999999999999984321111 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
...| +..+.+.+++. ++...+.++++||+.+|+.+-+.||+-.
T Consensus 146 --~~KP--~~~~~~~~~~~-~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 146 --AYKP--APQVYQLALEA-LGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred --CCCC--CHHHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 0112 23344444444 3445666778899999999999999753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0013 Score=67.61 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=73.9
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
..+++.+++.++++.|++.|++++++||+....+..+.+.+|+.. ..+-.+.|.+... ..+....+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~--~~f~~i~~~~~~~-----------~~~~~~~~- 249 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD--IWFDDLIGRPPDM-----------HFQREQGD- 249 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC--CchhhhhCCcchh-----------hhcccCCC-
Confidence 467899999999999999999999999999999999999998842 0111111111000 00000000
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
-+..|+-+..+++.+ .....+.++++||..+|+.+-+.||+.+
T Consensus 250 ----~kp~p~~~~~~l~~~----~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 250 ----KRPDDVVKEEIFWEK----IAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ----CCCcHHHHHHHHHHH----hccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 134455566565542 3334578888899999999999999764
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0063 Score=57.67 Aligned_cols=129 Identities=17% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccch
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNI---------------NTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGD 196 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~ 196 (591)
.+.|++.+++++|+++|+++.++|+... .....+.++.|+.- +. +......-.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f--~~-i~~~~~~~~--------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL--DG-IYYCPHHPE--------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc--ce-EEECCCCCC---------
Confidence 3679999999999999999999998762 11122333444410 11 110000000
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCC-Ccc-HHHHhcc
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGI-AGT-DVAKEAS 273 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~-~~~-~~ak~aa 273 (591)
...-..+..| .+....++. +....+.++++||+.+|+.+-+.||+. +++.. ... ......+
T Consensus 97 -----------~~~~~~KP~p----~~~~~~~~~-l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~ 160 (181)
T PRK08942 97 -----------DGCDCRKPKP----GMLLSIAER-LNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAA 160 (181)
T ss_pred -----------CCCcCCCCCH----HHHHHHHHH-cCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccC
Confidence 0000011122 333344443 455667788889999999999999964 22221 111 1222334
Q ss_pred --cccccCCChhHHHHHHH
Q psy8116 274 --DIILTDDNFSSIVKAVM 290 (591)
Q Consensus 274 --d~vl~~~~~~~i~~~i~ 290 (591)
|+++. ++..+.+.+.
T Consensus 161 ~~~~ii~--~l~el~~~l~ 177 (181)
T PRK08942 161 PGTWVLD--SLADLPQALK 177 (181)
T ss_pred CCceeec--CHHHHHHHHH
Confidence 77765 6666665543
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0029 Score=62.54 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN----INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|+...+...+.+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 477789999999999999999999974 6688899988999422221222222210
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.-.+|...++. ...++++||..+|..+-+.||+-
T Consensus 173 --------~K~~K~~~l~~---------~~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 --------GQYTKTQWLKK---------KNIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --------CCCCHHHHHHh---------cCCeEEEcCCHHHHHHHHHcCCc
Confidence 01234443332 12378889999999999999963
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0044 Score=60.75 Aligned_cols=125 Identities=10% Similarity=0.122 Sum_probs=78.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+ +|+++.++|+.....+....++.|+...-+..+ .+.+..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~--~~~~~~------------------------ 147 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLV--ISEQVG------------------------ 147 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEE--EECccC------------------------
Confidence 57899999999999 689999999998888888888888842111111 111000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee-eeeCCCccH-HHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG-FAMGIAGTD-VAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg~~~~~-~ak~aad~vl~~~~~~~i~~~ 288 (591)
.+..+..+...+++.....+.+.+++|||+. +|+.+-+.||+- +.+...+.. .....+|+++. ++..+.+.
T Consensus 148 ----~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 221 (224)
T PRK09449 148 ----VAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQL 221 (224)
T ss_pred ----CCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHH
Confidence 0122334555555553223456788889998 799999999975 333311211 11124677765 67666654
Q ss_pred H
Q psy8116 289 V 289 (591)
Q Consensus 289 i 289 (591)
+
T Consensus 222 l 222 (224)
T PRK09449 222 L 222 (224)
T ss_pred H
Confidence 4
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0042 Score=61.45 Aligned_cols=87 Identities=23% Similarity=0.253 Sum_probs=59.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGD----NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd----~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
+.+++.+.++.++++|+++.++|++ ...++..+.+.+|+.. ....++.+....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~--~f~~i~~~d~~~--------------------- 171 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA--MNPVIFAGDKPG--------------------- 171 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch--heeEEECCCCCC---------------------
Confidence 4455999999999999999999999 7779999999999943 111222222110
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV 257 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v 257 (591)
...| +|...++ ..+ .++++||+.||+.+-+.|++
T Consensus 172 -----~~Kp-~~~~~l~--------~~~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 172 -----QYQY-TKTQWIQ--------DKN-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred -----CCCC-CHHHHHH--------hCC-CeEEEeCCHHHHHHHHHCCC
Confidence 0012 2322221 112 36888999999999999985
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.003 Score=59.77 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=63.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+...-+.. +.+.+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v--~~~~~~------------------------ 138 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAI--VDADEV------------------------ 138 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEe--eehhhC------------------------
Confidence 468999999999999999999999987 6677788888884211111 111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..| +..+...+++. +....+.+++|||+.+|+.+-+.||+.
T Consensus 139 --~~~kp--~~~~~~~~~~~-~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 139 --KEGKP--HPETFLLAAEL-LGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred --CCCCC--ChHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 01112 22334444444 344556677889999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0026 Score=60.19 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=62.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-+. ++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAEI------------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhhc-------------------------
Confidence 6789999999999999999999997542 4567778887432121 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+ +..+..+.+..++. ++...+.+++|||+.+|+.+-+.||+-
T Consensus 138 -~~--~kp~p~~~~~~~~~-~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 138 -KK--GKPDPEIFLAAAEG-LGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -CC--CCCChHHHHHHHHH-cCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 01 12233444444444 445566788889999999999999974
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0038 Score=60.97 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=76.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++. +++.++|+.....+..+.++.|+...-+..++ +.+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~--~~~~------------------------- 148 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFV--SEDA------------------------- 148 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEE--cCcc-------------------------
Confidence 5789999999999999 99999999999999999999998432111111 1000
Q ss_pred EEecChhhHHHHHHHHHHhhc-CCCCcEEEEECCCC-CCHHhhhcCCee-eeeCC-CccHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKV-SDSREVVAVTGDGT-NDGPALKKADVG-FAMGI-AGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~-~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg~-~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.. +..+..+.+..++. + ....+.+++|||+. +|+.+-+.+|+. +.... ..++.....++.++. ++..+..
T Consensus 149 -~~--~KP~~~~~~~~~~~-~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 149 -GI--QKPDKEIFNYALER-MPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred -CC--CCCCHHHHHHHHHH-hcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 00 11233445555554 3 44556788889998 899999999963 22221 112122234555554 5555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0016 Score=60.38 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=71.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
..++.|++.+.++.|++.|++++++|+..........+.+|+...-+.. .. ..+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i-~~-~~~~----------------------- 129 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEI-IS-SDDV----------------------- 129 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEE-EE-GGGS-----------------------
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccc-cc-cchh-----------------------
Confidence 4568999999999999999999999999999999999999985221211 11 1110
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
..+..+..+.+.+++. ++...+.++++||+..|+.+-+.||+.
T Consensus 130 -----~~~Kp~~~~~~~~~~~-~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 130 -----GSRKPDPDAYRRALEK-LGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp -----SSSTTSHHHHHHHHHH-HTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred -----hhhhhHHHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 0122333455566555 355667788889999999999999875
|
... |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0044 Score=58.40 Aligned_cols=123 Identities=19% Similarity=0.119 Sum_probs=71.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCCCCCCceEEec--chhhHHhhhcccchhhHHHH
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNIN--------TARSIATKCGILKPGDDFLILE--GKEFNRRVRDANGDVQQHLL 202 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~~i~l~--g~~~~~~~~~~~~~~~~~~l 202 (591)
+.|++.++++.|++.|+++.++|+.... .+....+..|+. ..+.+.. +.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~~~~~---------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD---DIYLCPHKHGDGC---------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC---EEEECcCCCCCCC----------------
Confidence 6799999999999999999999987631 223334445552 1111110 0000
Q ss_pred hhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee-eeCC-CccH--------HHHhc
Q psy8116 203 DKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF-AMGI-AGTD--------VAKEA 272 (591)
Q Consensus 203 ~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi-amg~-~~~~--------~ak~a 272 (591)
. ...-+..+.+..+++ +....+.+.++||+.+|+.+-++|++-. ++.. .+.+ ..+..
T Consensus 90 ----------~--~~KP~p~~~~~~~~~-l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~ 156 (173)
T PRK06769 90 ----------E--CRKPSTGMLLQAAEK-HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIE 156 (173)
T ss_pred ----------C--CCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCC
Confidence 0 011223344444444 4556677888899999999999999643 3321 1221 11234
Q ss_pred ccccccCCChhHHHHHH
Q psy8116 273 SDIILTDDNFSSIVKAV 289 (591)
Q Consensus 273 ad~vl~~~~~~~i~~~i 289 (591)
+|+++. ++..+...+
T Consensus 157 ~~~~~~--~~~el~~~l 171 (173)
T PRK06769 157 PNYIAE--NFEDAVNWI 171 (173)
T ss_pred Ccchhh--CHHHHHHHH
Confidence 666665 566665543
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.009 Score=56.20 Aligned_cols=115 Identities=16% Similarity=0.082 Sum_probs=72.1
Q ss_pred EEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 122 TGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGD-NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 122 ~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+...+... .+ ..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------~~------------~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------PM------------HS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------cH------------HH
Confidence 344555556678999999999999999999999987 889999999999984211100 00 00
Q ss_pred HHhhhcCcceEEEecChhhH--HHHHHHHHHhhc--CCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 201 LLDKVWPRLRVLARSSPTDK--YTLVKGIIDSKV--SDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K--~~~v~~l~~~~~--~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.++ ..+.+...+..| ..+.+.+.+. + +...+.++++||+..|+.+-++|++-++
T Consensus 97 ~Fd-----~iv~~~~~~~~kp~~~i~~~~~~~-~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 97 LFD-----DRIEIYKPNKAKQLEMILQKVNKV-DPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred hce-----eeeeccCCchHHHHHHHHHHhhhc-ccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 000 011111111112 1223332221 2 2456788888999999999999997654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0052 Score=65.53 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=65.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIAT-KCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~-~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|++.|+++.++|+.....+..... ..|+...-+. ++.+.+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~v------------------------ 146 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDEV------------------------ 146 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhhc------------------------
Confidence 578999999999999999999999999888877665 5777322121 1111111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..| +.++....++. +....+.++++||+.+|+.+-+.||+.
T Consensus 147 --~~~KP--~p~~~~~a~~~-lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 147 --EKGKP--SPDIFLEAAKR-LNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred --CCCCC--CHHHHHHHHHH-cCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 01112 23344444444 455567788889999999999999975
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0083 Score=56.41 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=63.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+..... ..+..++|+...-+..+ .+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~--~~~~~------------------------- 136 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVI--FSGDV------------------------- 136 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEE--EcCCC-------------------------
Confidence 688999999999999999999999988877 55555688843211111 11110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
....| +....+.+++. +....+.+.++||+..|+.+-+++|+-
T Consensus 137 -~~~KP--~~~~~~~~~~~-~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 137 -GRGKP--DPDIYLLALKK-LGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred -CCCCC--CHHHHHHHHHH-cCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 00111 22333444444 344567778889999999999998873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0097 Score=55.88 Aligned_cols=87 Identities=21% Similarity=0.209 Sum_probs=62.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN-INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ..+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------~~~--------------------------- 88 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------LPH--------------------------- 88 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------EcC---------------------------
Confidence 578999999999999999999999988 566777777777621 000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
...| +..+...+++. +....+.+++|||.. .|+.+-+.||+-
T Consensus 89 ---~~KP--~p~~~~~~l~~-~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 89 ---AVKP--PGCAFRRAHPE-MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred ---CCCC--ChHHHHHHHHH-cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 0112 23344444444 355567788889998 799999999963
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.01 Score=54.29 Aligned_cols=99 Identities=19% Similarity=0.176 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNI---------------NTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANG 195 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~ 195 (591)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+... ..+....+ .+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCC---------
Confidence 4789999999999999999999998762 345566677777310 00110000 000
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
......|..+++.+++. ++...+.+++|||+..|+.+-+.+++-.
T Consensus 97 ------------------~~~~KP~~~~~~~~~~~-~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------------------CSCRKPKPGLILEALKR-LGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------------------CCCCCCCHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00012345556666665 4556677888899999999999998753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0098 Score=58.25 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=58.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCCCCCCceEEecch--hhHHhhhcccchhhHHHHhhhcC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS-IATKCGILKPGDDFLILEGK--EFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~-ia~~~gi~~~~~~~i~l~g~--~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
-++.|++.+.|+.|++.|+++.++||........ ..+..++...-+.. +.+. +..
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i--~~~~~~~~~-------------------- 134 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHV--VTGDDPEVK-------------------- 134 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEE--EECChhhcc--------------------
Confidence 4578999999999999999999999987654432 22222332111111 1111 100
Q ss_pred cceEEEecChhhHHHHHHHHHHhhc--CCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKV--SDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~--~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
+..| +..+....++.+. ....+.+++|||+..|+.+-++||+.
T Consensus 135 ------~~KP--~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 135 ------QGKP--APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred ------CCCC--CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 0111 2223333333322 24456788889999999999999964
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0058 Score=56.51 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=72.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCce-EEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDF-LILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++|+-++.++.+++.+++|+++||-...-...+-..++=-..-.+. ++.|...+ ..++ ....
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i-----h~dg-----------~h~i 136 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI-----HIDG-----------QHSI 136 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE-----cCCC-----------ceee
Confidence 58999999999999999999999998888888887776511000000 11111100 0000 0000
Q ss_pred EEEecC--hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee
Q psy8116 211 VLARSS--PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM 261 (591)
Q Consensus 211 v~~r~s--p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam 261 (591)
+....+ ..+|...++.+ .++.+.+.++|||+.|+++-+.+|+=+|=
T Consensus 137 ~~~~ds~fG~dK~~vI~~l-----~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 137 KYTDDSQFGHDKSSVIHEL-----SEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ecCCccccCCCcchhHHHh-----hcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 111112 35899999984 56677799999999999999999988863
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.057 Score=54.02 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=41.4
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTG---DNINTARSIATKCGILKP 174 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~ 174 (591)
|++.-.+.+-|++.++|++|+++|++++++|| +.........+++|+..+
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444566677999999999999999999995 888888888889998654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.005 Score=60.26 Aligned_cols=97 Identities=10% Similarity=0.075 Sum_probs=66.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.| ++++.++|+.....+....+..|+...-+. .++.+.+..
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~----------------------- 139 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQ----------------------- 139 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcC-----------------------
Confidence 45778999999998 499999999998888888888888431111 122222111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.++-+..+....++. +....+.++++||+.+|+.+-++||+.+.
T Consensus 140 -----~~KP~p~~~~~a~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 -----RWKPDPALMFHAAEA-MNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred -----CCCCChHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 112233444444444 45556778889999999999999998764
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.014 Score=55.07 Aligned_cols=122 Identities=18% Similarity=0.093 Sum_probs=65.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH---------------HHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccch
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNIN---------------TARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGD 196 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~---------------ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~ 196 (591)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.- +..+ +..+..-.....
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~~~~~~~~~~~~----- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL--DGIYYCPHHPEGVEEFR----- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc--cEEEECCCCCccccccc-----
Confidence 6789999999999999999999986631 1112233333310 0000 000000000000
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee--eeCCCcc---HHHHh
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF--AMGIAGT---DVAKE 271 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi--amg~~~~---~~ak~ 271 (591)
. -... ..-+..++...+++ ++...+.++|+||..+|+.+-+.|++.. .+. .+. .....
T Consensus 100 -----------~--~~~~--~KP~p~~~~~a~~~-~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~ 162 (176)
T TIGR00213 100 -----------Q--VCDC--RKPKPGMLLQARKE-LHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAEN 162 (176)
T ss_pred -----------C--CCCC--CCCCHHHHHHHHHH-cCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccc
Confidence 0 0000 12234455555555 4555667778899999999999999853 332 222 12123
Q ss_pred ccccccc
Q psy8116 272 ASDIILT 278 (591)
Q Consensus 272 aad~vl~ 278 (591)
.+|+++.
T Consensus 163 ~ad~~i~ 169 (176)
T TIGR00213 163 IADWVLN 169 (176)
T ss_pred cCCEEec
Confidence 4777775
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.049 Score=54.46 Aligned_cols=48 Identities=15% Similarity=0.284 Sum_probs=41.4
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK---CGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~---~gi~ 172 (591)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 56666678899999999999999999999999999888887776 4763
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.013 Score=53.69 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=62.7
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
+.+..+++.+.++.|++.|+++.++|+.....+....+.. +... ...+...+ +
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~~i~~~~-~------------------------ 114 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FDLILGSD-E------------------------ 114 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-CcEEEecC-C------------------------
Confidence 4445689999999999999999999999999988877765 4211 11111110 0
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD 256 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~ 256 (591)
..+..+......+++++ +... .++++||+.+|+.+-+.|+
T Consensus 115 -----~~~Kp~~~~~~~~~~~~-~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 115 -----FGAKPEPEIFLAALESL-GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -----CCCCcCHHHHHHHHHHc-CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 00122345566666653 4444 7888899999999888775
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.011 Score=55.09 Aligned_cols=97 Identities=21% Similarity=0.178 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCceEEec----chhhHHhhhc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN---------------INTARSIATKCGILKPGDDFLILE----GKEFNRRVRD 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~i~l~----g~~~~~~~~~ 192 (591)
++-|++.++|+.|+++|+++.++|... ...+..+.+.+|+. -+. +... +.+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~-ii~~~~~~~~~~------ 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDD-VLICPHFPDDNC------ 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeE-EEECCCCCCCCC------
Confidence 467999999999999999999999852 34556667777772 001 1111 0000
Q ss_pred ccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 193 ANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 193 ~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
. ...-|..++..+++. +....+.+.+|||+.+|+.+-+.|++...
T Consensus 100 -------------------~---~~KP~~~~~~~~~~~-~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -------------------D---CRKPKIKLLEPYLKK-NLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------------C---CCCCCHHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 012334555555555 45556778888999999999999997643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.015 Score=55.91 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=62.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-|++.++++.|+++|+++.++|+-... +....+.+|+...-+..+ ...+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~--~s~~~------------------------- 156 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVV--TSYEV------------------------- 156 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEE--eeccc-------------------------
Confidence 57899999999999999999999986654 466777788732111111 11000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
....| +..+.+.+++. ++...+.+++|||+. +|+.+-++||+-
T Consensus 157 -~~~KP--~~~~~~~~~~~-~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 157 -GAEKP--DPKIFQEALER-AGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred -CCCCC--CHHHHHHHHHH-cCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 00112 22445555554 456667788889997 899999988764
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.19 Score=50.57 Aligned_cols=48 Identities=23% Similarity=0.317 Sum_probs=37.8
Q ss_pred EEeeccCC----CCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy8116 125 CVVGIEDP----VRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGIL 172 (591)
Q Consensus 125 G~i~i~d~----lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 172 (591)
|++.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44445555 88999999999999999999999987776 44555667874
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.021 Score=59.45 Aligned_cols=95 Identities=11% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK----CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
++.+++.++|+.|+++|+++.++|..+...+..+.++ +|+. +++..+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~---~~f~~~-------------------------- 81 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA---EDFDAR-------------------------- 81 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH---HHeeEE--------------------------
Confidence 3578999999999999999999999999999998887 6662 111111
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
...+..|...++.+++. +....+.++++||...|+.+.+.+...+.+-
T Consensus 82 ------~~~~~pk~~~i~~~~~~-l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 82 ------SINWGPKSESLRKIAKK-LNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ------EEecCchHHHHHHHHHH-hCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22245677888887777 4556677888899999999999988776544
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0089 Score=54.74 Aligned_cols=94 Identities=14% Similarity=0.063 Sum_probs=64.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCc-eEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD-FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~-~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
+++|++.+.++.|+ .|+++.++|+-+...+..+.+.+|+.. .. ..++.+.+..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~--~~f~~i~~~~d~~----------------------- 98 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKK--YFGYRRLFRDECV----------------------- 98 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCC--CEeeeEEECcccc-----------------------
Confidence 57999999999998 579999999999999999999998732 11 1112222110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
+..|. ..+.+ +. +....+.+.++||+.+|..+-+.|++-+.
T Consensus 99 ---~~KP~----~~k~l-~~-l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 99 ---FVKGK----YVKDL-SL-LGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---ccCCe----EeecH-HH-cCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 01121 22222 22 45566778888999999999888876654
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.032 Score=52.18 Aligned_cols=94 Identities=13% Similarity=0.120 Sum_probs=60.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNIN------------TARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~------------ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
+-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ..++..+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~---~~ii~~~~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI---QVLAATHAGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE---EEEEecCCCC--------------
Confidence 4599999999999999999999975542 4566778888731 1221111100
Q ss_pred HHhhhcCcceEEEecChhhHHHHHHHHHHhhcC--CCCcEEEEECCCC--------CCHHhhhcCCeee
Q psy8116 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVS--DSREVVAVTGDGT--------NDGPALKKADVGF 259 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~--~~~~~va~iGDg~--------ND~~mLk~A~vGi 259 (591)
.+.-+..+++.+++. ++ ...+.+++|||.. +|+.+-++||+-+
T Consensus 106 ---------------~~KP~p~~~~~~~~~-~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 106 ---------------YRKPMTGMWEYLQSQ-YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---------------CCCCccHHHHHHHHH-cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 011223344444444 33 4456788889986 6999999988765
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.1 Score=51.86 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=38.1
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR--SIATKCGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~--~ia~~~gi~ 172 (591)
|++.-.+.+-|++.++++.|+++|+++.++|......+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 444556778999999999999999999999986554443 566788884
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.028 Score=50.04 Aligned_cols=95 Identities=11% Similarity=0.122 Sum_probs=61.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGD-NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..|. .+ .+.+ +. ..++.+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~---~~---~i~~--l~------------~~f~~~----- 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED---FG---IIFP--LA------------EYFDPL----- 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc---cc---cchh--hH------------hhhhhh-----
Confidence 78999999999999999999999999 77777777666661 00 0000 00 000000
Q ss_pred EEEecChhhHHHHHHHHHHhhcC--CCCcEEEEECCCCCCHHhhhc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVS--DSREVVAVTGDGTNDGPALKK 254 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~--~~~~~va~iGDg~ND~~mLk~ 254 (591)
+.....| |.+.+...++. ++ ...+.++++||...|...+++
T Consensus 84 ~~~~~~p--kp~~~~~a~~~-lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 TIGYWLP--KSPRLVEIALK-LNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hhcCCCc--HHHHHHHHHHH-hcCCCCcceEEEECCCHhHHHHHHh
Confidence 1111123 45556666665 45 567888889999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.024 Score=59.04 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHhhcCCC---CcEEEEECCCCCCHHhhhcC-----CeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDS---REVVAVTGDGTNDGPALKKA-----DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~---~~~va~iGDg~ND~~mLk~A-----~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
-+|+.+++.++++. ... ...++++||...|-.|++.. |+||.+|.... ...|++.+. +-+.+.+.+
T Consensus 268 ~dKG~Av~~Ll~~~-~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~--dp~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESL-GYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQ--EPDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhc-ccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCC--CHHHHHHHH
Confidence 49999999998763 222 23578889999999999853 67777762111 236888887 667776665
Q ss_pred H
Q psy8116 290 M 290 (591)
Q Consensus 290 ~ 290 (591)
.
T Consensus 342 ~ 342 (354)
T PLN02151 342 E 342 (354)
T ss_pred H
Confidence 4
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.046 Score=65.76 Aligned_cols=132 Identities=14% Similarity=0.149 Sum_probs=82.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+-|++.+.++.|+++|+++.++|+.....+....++.|+....-+. ++.+.+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~-iv~~~~~------------------------- 214 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA-IVSADAF------------------------- 214 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE-EEECccc-------------------------
Confidence 46899999999999999999999999999999998999984111111 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHHHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
.+..| +.++....++. ++...+.++++||..+|+.+-+.|++ ++.-+....+.....+|+++.+-..-++..+
T Consensus 215 -~~~KP--~Pe~~~~a~~~-lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~ 290 (1057)
T PLN02919 215 -ENLKP--APDIFLAAAKI-LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDI 290 (1057)
T ss_pred -ccCCC--CHHHHHHHHHH-cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHH
Confidence 01122 23344444444 45556678888999999999999996 3333322233444567777763322234444
Q ss_pred HHHHH
Q psy8116 289 VMWGR 293 (591)
Q Consensus 289 i~~gR 293 (591)
+..|-
T Consensus 291 ~~~~~ 295 (1057)
T PLN02919 291 LTGGS 295 (1057)
T ss_pred HhcCC
Confidence 33333
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.052 Score=53.20 Aligned_cols=99 Identities=11% Similarity=0.168 Sum_probs=66.5
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG---ILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g---i~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
.+-++.|++.+++++|+++|+++.++|..+......+.+..+ +.. . ++..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~---~------------------------f~~~ 144 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP---Y------------------------FSGY 144 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh---h------------------------cceE
Confidence 345799999999999999999999999988877776665542 211 0 0000
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.. ....+..+......+++. ++...+.++++||...|+.+-++||+-..
T Consensus 145 fd-----~~~g~KP~p~~y~~i~~~-lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 145 FD-----TTVGLKTEAQSYVKIAGQ-LGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EE-----eCcccCCCHHHHHHHHHH-hCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 00 001122233445555555 45556778899999999999999997543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.086 Score=51.98 Aligned_cols=118 Identities=19% Similarity=0.269 Sum_probs=74.4
Q ss_pred CCCCchHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 132 PVRPEVPDAIRKC--QRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 132 ~lr~~v~~~I~~l--~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
|+.|+.+++++.+ ++.|+.+.++|.-|......+.+.-|+...-.. +.-|-..++. .+.... . ....
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~-----~G~l~v---~--pyh~ 139 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-IFTNPACFDA-----DGRLRV---R--PYHS 139 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-EEeCCceecC-----CceEEE---e--CccC
Confidence 6889999999999 568999999999999999999999998532111 2222222211 111000 0 0000
Q ss_pred eEEEecCh-hhHHHHHHHHHHhhcC--CCCcEEEEECCCCCCHH-hhh--cCCeeee
Q psy8116 210 RVLARSSP-TDKYTLVKGIIDSKVS--DSREVVAVTGDGTNDGP-ALK--KADVGFA 260 (591)
Q Consensus 210 ~v~~r~sp-~~K~~~v~~l~~~~~~--~~~~~va~iGDg~ND~~-mLk--~A~vGia 260 (591)
.-+.++.| .-|+.+++.+++...+ ...+.|.++|||.||.. +++ .+|+-++
T Consensus 140 h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 140 HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 11223433 4799999988775322 23478888999999964 443 4565554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.086 Score=50.45 Aligned_cols=122 Identities=23% Similarity=0.297 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCceE-Ee-cchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 132 PVRPEVPDAIRKCQRAGI-TVRMVTGDNINTARSIATKCGILKPGDDFL-IL-EGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
|+.|+..++|+.+++.|. .++++|--|.-....+.+..|+.. .+- +. |-.. .+..|...-. -+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d---~F~~IfTNPa~-----~da~G~L~v~----pyH~ 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD---LFSEIFTNPAC-----VDASGRLLVR----PYHT 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH---HHHHHhcCCcc-----cCCCCcEEee----cCCC
Confidence 788999999999999997 999999999999999988888731 000 00 0000 0111110000 0001
Q ss_pred ceEEEecCh-hhHHHHHHHHHHhhcCC--CCcEEEEECCCCCCH-HhhhcCCeeeeeCCCc
Q psy8116 209 LRVLARSSP-TDKYTLVKGIIDSKVSD--SREVVAVTGDGTNDG-PALKKADVGFAMGIAG 265 (591)
Q Consensus 209 ~~v~~r~sp-~~K~~~v~~l~~~~~~~--~~~~va~iGDg~ND~-~mLk~A~vGiamg~~~ 265 (591)
..-+.++.+ .=|+.++..+..+..++ +.+.+..+|||.||. |+++...--+||--.|
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 112223222 25787777765553433 334788889999995 7777766666765444
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.081 Score=55.48 Aligned_cols=102 Identities=22% Similarity=0.119 Sum_probs=63.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGD---------------NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG 195 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~ 195 (591)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- + .+.+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d-~i~i~~~~~sd------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--D-EVLICPHFPED------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--e-eEEEeCCcCcc-------
Confidence 358899999999999999999999984 2334555666666621 1 11111000000
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
... ....|..++..+++. +....+.+.||||+.+|..+-+.|++-..
T Consensus 99 --------------~~~---~rKP~p~~l~~a~~~-l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------------NCS---CRKPKTGLVEEYLAE-GAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------------cCC---CCCCCHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000 112334455444443 34556778888999999999999998644
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.12 Score=52.06 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=58.1
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVW 206 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~ 206 (591)
..++-|++.+.++.+++.|+++.++|++.... +....++.|+.......+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lll------------------------- 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLL------------------------- 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEe-------------------------
Confidence 45678999999999999999999999988443 34556678885322222222
Q ss_pred CcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhh
Q psy8116 207 PRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALK 253 (591)
Q Consensus 207 ~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk 253 (591)
|.....|..-.+.+. ..-.+++++||..+|.....
T Consensus 171 -------r~~~~~K~~rr~~I~-----~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 -------KKDKSSKESRRQKVQ-----KDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred -------CCCCCCcHHHHHHHH-----hcCCEEEEECCCHHHhhhhh
Confidence 222223444444432 23567999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.23 Score=45.68 Aligned_cols=108 Identities=18% Similarity=0.204 Sum_probs=73.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH---HHHc-----CCCCCCCceEEecchhhHHhhhcccchhhHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI---ATKC-----GILKPGDDFLILEGKEFNRRVRDANGDVQQHLL 202 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i---a~~~-----gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l 202 (591)
|..++++.+..+.+++.|.+++.+|+|+.-.+... .... ++ |.+..+.-...-+....
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~Gpv~~sP~~l~~al~------------ 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PDGPVLLSPDSLFSALH------------ 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CCCCEEECCcchhhhhh------------
Confidence 68999999999999999999999999997665533 3333 44 22332221111111110
Q ss_pred hhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 203 DKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 203 ~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
-.+..+...+.|...++.+++.........++..|...+|+.+.+++++.
T Consensus 92 ------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 ------REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ------ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 01333444568999999887764445677888889999999999988765
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.1 Score=50.02 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=59.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+++++|++.+ +.+++|..+........+.+|+..-.... . ...+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~---------------------------f-~~i~ 124 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA---------------------------F-SEVL 124 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc---------------------------c-cEEE
Confidence 47899999999999985 56667765554444455566663110000 0 0011
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC--Ceee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA--DVGF 259 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A--~vGi 259 (591)
.+... ..|..++..+++. ++ .+.++++||..+|+.+-++| |+-.
T Consensus 125 ~~~~~-~~kp~~~~~a~~~-~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 125 MCGHD-ESKEKLFIKAKEK-YG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred EeccC-cccHHHHHHHHHH-hC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 12221 1245666666665 34 56688889999999999999 9853
|
2 hypothetical protein; Provisional |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.031 Score=55.37 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=32.6
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCC---CcEEEEECCCCCCHHhhhcC------CeeeeeCCCccHHHHhcccccccC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDS---REVVAVTGDGTNDGPALKKA------DVGFAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~---~~~va~iGDg~ND~~mLk~A------~vGiamg~~~~~~ak~aad~vl~~ 279 (591)
+-.|..-.+|+.+++.+++.. ... ...++++||...|-.|++.. ++++.++....-....+|++-+.|
T Consensus 157 vEvrp~~~~KG~av~~ll~~~-~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEEL-PFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS----------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEEEeCCCChHHHHHHHHHhc-CccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 334555568999999987652 222 45788889999999999874 567777743322334566665553
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.12 Score=49.60 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=60.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK-CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.++++.|+++|+++.++|+-+.......... .++...-+. +. ...+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~-v~-~s~~~------------------------ 137 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADH-IY-LSQDL------------------------ 137 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCE-EE-Eeccc------------------------
Confidence 5789999999999999999999999876554432222 233110010 00 00000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
...+.+..+.+.+++. ++...+.+.++||+..|+.+-++||+..
T Consensus 138 ----~~~KP~p~~~~~~~~~-~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 138 ----GMRKPEARIYQHVLQA-EGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred ----CCCCCCHHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 0112234455555555 4566677788899999999999999753
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.065 Score=51.91 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINT--ARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t--a~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
-++.|++.++++.|+++|+++.++|+..... ........++...-+..+ ...+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~--~s~~----------------------- 147 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVV--ESCL----------------------- 147 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEE--Eeee-----------------------
Confidence 3578999999999999999999999865433 222222233311101110 0000
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
+- ...|. ..+.+.+++. ++...+.++++||...|+.+-++||+-
T Consensus 148 --~~-~~KP~--p~~~~~~~~~-~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 148 --EG-LRKPD--PRIYQLMLER-LGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred --cC-CCCCC--HHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 00 01122 2334444444 455566677789999999999999974
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.19 Score=46.18 Aligned_cols=86 Identities=22% Similarity=0.331 Sum_probs=62.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
...|++.+-+.+++++|+++.++|..+...+...+.++|+. ++.-.++
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~-----fi~~A~K--------------------------- 93 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP-----FIYRAKK--------------------------- 93 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc-----eeecccC---------------------------
Confidence 37789999999999999999999999999999999999983 2222222
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCe
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADV 257 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~v 257 (591)
|-.+ .+-+++.+ ++...+.|+|+||.. .|+-+=..||+
T Consensus 94 -----P~~~-~fr~Al~~--m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 -----PFGR-AFRRALKE--MNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -----ccHH-HHHHHHHH--cCCChhHEEEEcchhhhhhhcccccCc
Confidence 2111 12233333 577788899999986 58877666664
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.3 Score=47.87 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=34.5
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGIL 172 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 172 (591)
+-|.-|++.++++.+++.|++|+++|||.... +..-.++.|+.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 34788999999999999999999999999765 33444566763
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.25 Score=46.70 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=63.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.+++.+++++|+ .++.++|+.+...+....+..|+...-+.+++. .+....
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~--~~~~~~---------------------- 136 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCF--DTANPD---------------------- 136 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEe--ecccCc----------------------
Confidence 47789999999997 478999999999999999999984321211111 110000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
.....| +..+.+.+++. ++...+.++++||...|+.+-+.||+..
T Consensus 137 ~~~~KP--~p~~~~~~~~~-~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 137 YLLPKP--SPQAYEKALRE-AGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cCCCCC--CHHHHHHHHHH-hCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000122 33455555555 4555666778899999999999998754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.49 Score=47.56 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=78.8
Q ss_pred ccCCCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHH--cCCCCCCCceE-Eecchh---------------hHHh
Q psy8116 129 IEDPVRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATK--CGILKPGDDFL-ILEGKE---------------FNRR 189 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~--~gi~~~~~~~i-~l~g~~---------------~~~~ 189 (591)
....+.++..+.+++|... ...++++|||..........- +|+...++... ..+|.. +...
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~ 116 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAI 116 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHH
Confidence 3456888999999999988 557999999999998887663 33333333333 334431 1111
Q ss_pred h----hcccc--------------------h-hhH---HH--------HhhhcCcceEEEecChhhHHHHHHHHHHhhcC
Q psy8116 190 V----RDANG--------------------D-VQQ---HL--------LDKVWPRLRVLARSSPTDKYTLVKGIIDSKVS 233 (591)
Q Consensus 190 ~----~~~~~--------------------~-~~~---~~--------l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~ 233 (591)
+ ....| + ... .. +.-...+..|-+|.+-..|+.+++.+.++ ..
T Consensus 117 l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~-~~ 195 (266)
T COG1877 117 LEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE-LP 195 (266)
T ss_pred HHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc-CC
Confidence 1 11111 0 000 00 00111233456777777899999988776 34
Q ss_pred CCCcEEEEECCCCCCHHhhhcCC
Q psy8116 234 DSREVVAVTGDGTNDGPALKKAD 256 (591)
Q Consensus 234 ~~~~~va~iGDg~ND~~mLk~A~ 256 (591)
..+..+.+.||...|-.|++..+
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhc
Confidence 44456777799999999999887
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.3 Score=46.12 Aligned_cols=93 Identities=11% Similarity=0.091 Sum_probs=61.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVL 212 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 212 (591)
+.| ..+.++.+++. +++.++||.....+....+..|+...-+. ++.+.+..
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~~~~~~~------------------------- 139 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VVAADDVQ------------------------- 139 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EEehhhcc-------------------------
Confidence 345 46899999865 89999999999999999999998432111 11111110
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..+..+.....+. ++...+.+.++||+.+|+.+-+.||+-
T Consensus 140 ---~~KP~p~~~~~~~~~-~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 140 ---HHKPAPDTFLRCAQL-MGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred ---CCCCChHHHHHHHHH-cCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 012233344444444 444556677889999999999999975
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.31 Score=50.41 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=39.1
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIA---TKCGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 172 (591)
|++--.+.+-|++.++|+.|++.|++++++|++...+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445667799999999999999999999999977777766 457763
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.9 Score=44.49 Aligned_cols=97 Identities=18% Similarity=0.227 Sum_probs=70.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+.+.++|+.....+..+....|+...-+ ..+.+.+..+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~--~~v~~~dv~~---------------------- 140 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD--VIVTADDVAR---------------------- 140 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc--hhccHHHHhc----------------------
Confidence 4789999999999999999999999999999999999999964211 1233333211
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..|+-=....+. ++-....+.++.|+.|.+.+-++||.-
T Consensus 141 --~KP~Pd~yL~Aa~~-----Lgv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 141 --GKPAPDIYLLAAER-----LGVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred --CCCCCHHHHHHHHH-----cCCChHHeEEEecchhHHHHHHHCCCE
Confidence 12334443444444 445566667779999999999999954
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.71 Score=43.06 Aligned_cols=91 Identities=22% Similarity=0.195 Sum_probs=62.1
Q ss_pred cCCCCCchHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 130 EDPVRPEVPDAIRKCQRAGI--TVRMVTGD-------NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI--~v~~~TGd-------~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
++.+.|+..+.+++|++.+. +|.++|.. +...|..+.+.+|+.- +
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv-----l--------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV-----L--------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE-----E---------------------
Confidence 45688999999999999987 49999986 4788999999999721 0
Q ss_pred HHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCC
Q psy8116 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKAD 256 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~ 256 (591)
.+....|....++.+.+.........+.+++|||-. .|+-|=...|
T Consensus 111 ----------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 111 ----------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 011124544455666543221224577899999975 5777665555
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.30 E-value=0.52 Score=46.68 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=58.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-|++.++++.|++. +++.++|..+.. .+..|+...-+. ++ ...+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~-i~-~~~~~------------------------- 159 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEF-VL-RAGPH------------------------- 159 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhce-eE-ecccC-------------------------
Confidence 5678999999999875 899999986643 245666321111 11 11100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeeeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGiamg 262 (591)
.+ .+.+..+....++. ++...+.+++|||+ ..|+.+-+.||+-....
T Consensus 160 -~~--~KP~p~~~~~a~~~-~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 160 -GR--SKPFSDMYHLAAEK-LNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred -Cc--CCCcHHHHHHHHHH-cCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 01 12234445554444 45556778888999 59999999999765433
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.33 E-value=2.8 Score=42.25 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=39.0
Q ss_pred EEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q psy8116 124 LCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK 168 (591)
Q Consensus 124 lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~ 168 (591)
=|++.-.+.+=|++.++|+.|+++|++++++|.....+...++.+
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 378888889999999999999999999999998887777755554
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.25 Score=42.05 Aligned_cols=49 Identities=20% Similarity=0.211 Sum_probs=35.8
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIA---TKCGILK 173 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~~ 173 (591)
|++...+.+-|++.++|+.|+++|++++++|.....+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 445557788899999999999999999999987755544444 5678753
|
... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=88.68 E-value=7.2 Score=45.79 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=31.3
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy8116 133 VRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATKCG 170 (591)
Q Consensus 133 lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 170 (591)
+.+++.+++++|.+. +..|+++|||...+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 567788899998865 78899999999999998876533
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=88.56 E-value=1 Score=45.62 Aligned_cols=40 Identities=13% Similarity=0.237 Sum_probs=37.6
Q ss_pred CC-CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 133 VR-PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 133 lr-~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
+| |++.+++++|+++|+++.++|+.....+....+++|+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd 186 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD 186 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 45 99999999999999999999999999999999999995
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=85.58 E-value=2.6 Score=46.74 Aligned_cols=39 Identities=21% Similarity=0.493 Sum_probs=31.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCC
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNI------------NTARSIATKCGI 171 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~------------~ta~~ia~~~gi 171 (591)
+-|+++++|+.|+++|++++++|.-.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999998554 345566777776
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=85.46 E-value=0.85 Score=40.43 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR 163 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~ 163 (591)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568889999999999999999999999887644
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=85.44 E-value=2.5 Score=40.79 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=68.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc-hhhHH----HHhhhc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG-DVQQH----LLDKVW 206 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~-~~~~~----~l~~~~ 206 (591)
.++|+.+..+++|+++||+|.++|=....+ +. .+.....+.|.++.+....... +...+ .-...|
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~---------~~-~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w 144 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL---------IP-SENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW 144 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh---------cc-ccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc
Confidence 479999999999999999999999554433 11 1233345667766554322110 00000 000111
Q ss_pred Ccce-----EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe
Q psy8116 207 PRLR-----VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV 257 (591)
Q Consensus 207 ~~~~-----v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v 257 (591)
..-. -.....|+.|..=++.+++. .+...+.++++=|....+.+-++.|+
T Consensus 145 ~~p~~y~~~gl~KPdp~iK~yHle~ll~~-~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 145 QEPSDYRPLGLDAPMPLDKSYHLKQVCSD-FNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred CChhhhhhhcccCCCccchHHHHHHHHHH-cCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 1111 11234556665655667666 46667788888999999999888765
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=85.17 E-value=2.9 Score=46.09 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=61.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK-CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
+++++.+. +++.|.+ +++|+-....+..+|++ +|+. ..+ |.++.. +.++... . .+
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VI---gTeLev---~~~G~~T--------G--~i 166 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVL---GTELEV---SKSGRAT--------G--FM 166 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEE---ecccEE---CcCCEEe--------e--ee
Confidence 66665554 4567754 99999999999999987 8983 222 111110 0000000 0 00
Q ss_pred EE--ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC
Q psy8116 212 LA--RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI 263 (591)
Q Consensus 212 ~~--r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~ 263 (591)
-. .+.-+.|...++.. +......+ +.||+.||.|||+.|+.+++++.
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~----~g~~~~~~-aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKE----FGDALPDL-GLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred cCCCCCccHHHHHHHHHH----hCCCCceE-EEECCccHHHHHHhCCccEEeCC
Confidence 00 12345687777632 22222234 45999999999999999999984
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=84.89 E-value=2.1 Score=43.55 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=40.4
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecch
Q psy8116 134 RPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGK 184 (591)
Q Consensus 134 r~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~ 184 (591)
.|++.+++++|+++|+++.++|+.+...+..+.+.+|+... -..++.+|.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y-FDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY-FDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc-ccEEEECCC
Confidence 38999999999999999999998888889999999999532 123444444
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=84.21 E-value=5.9 Score=39.26 Aligned_cols=139 Identities=18% Similarity=0.236 Sum_probs=70.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+|+++.+.++.|++.+|++.++|+--..-...+.++-|...++-.+ +-|--.+++ ++ .+.-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~V-vSN~M~Fd~-----~g------------~l~g 151 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKV-VSNFMDFDE-----DG------------VLVG 151 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEE-EEE-EEE-T-----TS------------BEEE
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEE-EeeeEEECC-----cc------------eEee
Confidence 58999999999999999999999988888888888888876654222 222112211 00 0000
Q ss_pred EEe--cChhhHHHHHH---HHHHhhcCCCCcEEEEECCCCCCHHhhhcC-C--eeeeeC--CCcc----HHHHhcccccc
Q psy8116 212 LAR--SSPTDKYTLVK---GIIDSKVSDSREVVAVTGDGTNDGPALKKA-D--VGFAMG--IAGT----DVAKEASDIIL 277 (591)
Q Consensus 212 ~~r--~sp~~K~~~v~---~l~~~~~~~~~~~va~iGDg~ND~~mLk~A-~--vGiamg--~~~~----~~ak~aad~vl 277 (591)
|.. ..+-+|-.-+- ..-+. ++ .+..|+..||+.-|+.|-.-. + .-+.+| +... +.-+++=|+|+
T Consensus 152 F~~~lIH~~NKn~~~l~~~~~~~~-~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVl 229 (246)
T PF05822_consen 152 FKGPLIHTFNKNESALEDSPYFKQ-LK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVL 229 (246)
T ss_dssp E-SS---TT-HHHHHHTTHHHHHC-TT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEE
T ss_pred cCCCceEEeeCCcccccCchHHHH-hc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEE
Confidence 100 11223433221 01111 23 344555559999999998766 2 222222 1122 23467889999
Q ss_pred cCCChhHHHHHHH
Q psy8116 278 TDDNFSSIVKAVM 290 (591)
Q Consensus 278 ~~~~~~~i~~~i~ 290 (591)
.+|.--.++..|.
T Consensus 230 v~D~tm~v~~~il 242 (246)
T PF05822_consen 230 VDDQTMDVPNAIL 242 (246)
T ss_dssp ET--B-HHHHHHH
T ss_pred ECCCCchHHHHHH
Confidence 9877555555544
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.95 E-value=4.5 Score=38.21 Aligned_cols=104 Identities=21% Similarity=0.214 Sum_probs=58.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhc--Ccce
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVW--PRLR 210 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 210 (591)
+.+++.+++..++++|.+++|+|. +-||.. . ..++.++...- ......+...- -.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~r--g---yf~~~~f~~~~-----~~m~~~l~~~gv~id~i 90 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGR--G---YFTEADFDKLH-----NKMLKILASQGVKIDGI 90 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccc--c---CccHHHHHHHH-----HHHHHHHHHcCCccceE
Confidence 578999999999999999999996 233421 1 12223332210 00111111111 0112
Q ss_pred EEEecChh-------hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPT-------DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~-------~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+|.-.|+ -|.-++...+++ +...-....+|||...|..+-..|+++
T Consensus 91 ~~Cph~p~~~c~cRKP~~gm~~~~~~~-~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 91 LYCPHHPEDNCDCRKPKPGMLLSALKE-YNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred EECCCCCCCCCcccCCChHHHHHHHHH-hCCCccceEEecCcHHHHHHHHHCCCC
Confidence 33443343 234444444444 345556777779999999999888876
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.64 E-value=11 Score=44.72 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=31.5
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy8116 133 VRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATKCG 170 (591)
Q Consensus 133 lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 170 (591)
+.+++.++++.|.+. +..|+++|||...+.......++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 457788899998876 78899999999999998876644
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=82.13 E-value=1 Score=41.84 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=38.5
Q ss_pred eccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy8116 128 GIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 128 ~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 171 (591)
.+.=..||++.+.++.|.+. ..+++.|......|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 34446999999999999987 99999999999999999998886
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.92 E-value=7 Score=37.85 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=63.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.-++.+++.++++.+++. .++.++|.-....+.....++||.+.-+..++.+...
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g------------------------ 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVG------------------------ 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccc------------------------
Confidence 347888999999999988 9999999988888899999999743222222111100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
...|.. ++-+.+++. ++...+.++++||+. ||+..-+++|.-
T Consensus 152 ----~~KP~~--~~f~~~~~~-~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 152 ----VAKPDP--EIFEYALEK-LGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred ----cCCCCc--HHHHHHHHH-cCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 112222 233344444 455577888999975 675666777753
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=80.91 E-value=2.2 Score=42.04 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=31.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGIL 172 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 172 (591)
++.-|++.+.++.+++.|++|+++|||+... +..=.++.|+.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~ 158 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFP 158 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCC
Confidence 4566889999999999999999999998552 22334456653
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 591 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 5e-43 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-43 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-42 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-41 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-41 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-41 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-40 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-38 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 5e-19 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-17 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-14 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-14 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-13 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 6e-13 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 8e-13 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 8e-13 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 9e-12 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-06 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 591 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-113 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-111 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-111 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 2e-79 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 4e-70 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 6e-31 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-29 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-27 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-27 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-12 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 1e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 2e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 3e-04 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 4e-04 | |
| 2kne_B | 28 | CAM, ATPase, Ca++ transporting, plasma membrane 4; | 5e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 6e-04 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 7e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 358 bits (922), Expect = e-113
Identities = 134/492 (27%), Positives = 218/492 (44%), Gaps = 52/492 (10%)
Query: 41 PTKVLPRSCAFIYGRDGNLEKFTREMQDR-LVRNVIEPMACDGLRTISIAYRDFVPGKAE 99
P V+ R C ++ T ++++ L D LR +++A RD P + E
Sbjct: 519 PEGVIDR-CNYVR-VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE 576
Query: 100 INQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNI 159
+ + +LT + VVG+ DP R EV +I+ C+ AGI V M+TGDN
Sbjct: 577 M------VLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNK 630
Query: 160 NTARSIATKCGILKPGDDF--LILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP 217
TA +I + GI ++ G+EF D + + R AR P
Sbjct: 631 GTAIAICRRIGIFGENEEVADRAYTGREF-----DDLPLAE---QREACRRACCFARVEP 682
Query: 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIIL 277
+ K +V+ + E+ A+TGDG ND PALKKA++G AMG +GT VAK AS+++L
Sbjct: 683 SHKSKIVEYL-----QSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVL 736
Query: 278 TDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWV 337
DDNFS+IV AV GR +Y+++ +F+++ ++ NV V+ F+ A L VQ+LWV
Sbjct: 737 ADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWV 796
Query: 338 NLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTL---- 393
NL+ D L + AL P D++ R P +PLIS + + Y
Sbjct: 797 NLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWW 856
Query: 394 ----------LFVGDKLLDIPTGRGAEFGSEPTQHF------TVIFNTFVFMTLFNEINA 437
+ T F + F T+ + V + + N +N+
Sbjct: 857 FMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNS 916
Query: 438 RKIHGQRNVFE-GFFSNP-IFYSIWFITAASQVFIIQ--FGREAFSTKSLTLEQWLWCLF 493
+ +++ + N + SI ++ + I+ F K+L L QWL L
Sbjct: 917 LSEN--QSLMRMPPWVNIWLLGSI-CLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLK 973
Query: 494 FGIGTLLWGQVV 505
+ + +++
Sbjct: 974 ISLPVIGLDEIL 985
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 355 bits (913), Expect = e-111
Identities = 131/530 (24%), Positives = 211/530 (39%), Gaps = 74/530 (13%)
Query: 41 PTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEI 100
P +VL R C+ I G + ++ + + G R +
Sbjct: 521 PERVLER-CSSIL-IKGQELPLDEQWREA-FQTAYLSLGGLGERVLGFCQLYLSE----- 572
Query: 101 NQVHIDTEPNWDDEEYIVNNLT--GLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDN 158
+ + + + L+ GL V + DP R VPDA+ KC+ AGI V MVTGD+
Sbjct: 573 KDYPPGYAFDVEAMNFPTSGLSFAGL--VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDH 630
Query: 159 INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHL--------------LDK 204
TA++IA GI+ G + + V N + L +
Sbjct: 631 PITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVE 690
Query: 205 VWPRLR--VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262
V AR+SP K +V+ +VAVTGDG ND PALKKAD+G AMG
Sbjct: 691 ALRTHPEMVFARTSPQQKLVIVESC-----QRLGAIVAVTGDGVNDSPALKKADIGVAMG 745
Query: 263 IAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVN---VVAVIVAFI 319
IAG+D AK A+D+IL DDNF+SIV V GR ++D++ K + + LT N + ++
Sbjct: 746 IAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYIT 805
Query: 320 GACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR------TKPLISK 373
+ + PL + +L++ L D S++LA E D++ +P +PL +
Sbjct: 806 VSVPL---PLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAY 862
Query: 374 TMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHF-------------- 419
+ + Q+ T FT + + G ++ + Q
Sbjct: 863 SYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRL 922
Query: 420 -------TVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQVFII 471
TV F + + + + + + F+ GFF N I F+
Sbjct: 923 YQQYTCYTVFFISIEMCQIADVLIRKTRR--LSAFQQGFFRNRILVIAIVFQVCIGCFLC 980
Query: 472 Q--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSW 519
F+ + + WL + FG+ ++ ++ R P SW
Sbjct: 981 YCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLG-VRCCPG--SW 1027
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 354 bits (911), Expect = e-111
Identities = 131/526 (24%), Positives = 218/526 (41%), Gaps = 67/526 (12%)
Query: 41 PTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEI 100
P ++L R C+ I +G E +M++ +N + G R + +
Sbjct: 516 PERILDR-CSTIL-LNGAEEPLKEDMKEA-FQNAYLELGGLGERVLGFCHFALPE----- 567
Query: 101 NQVHIDTEPNWDDEEYIVNNLT--GLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDN 158
++ + + D+ + +L GL + + DP R VPDA+ KC+ AGI V MVTGD+
Sbjct: 568 DKYNEGYPFDADEPNFPTTDLCFVGL--MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 625
Query: 159 INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHL--------------LDK 204
TA++IA GI+ G++ + N + N + LD
Sbjct: 626 PITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDD 685
Query: 205 VWPRLR--VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262
+ V AR+SP K +V+G +VAVTGDG ND PALKKAD+G AMG
Sbjct: 686 ILHYHTEIVFARTSPQQKLIIVEGC-----QRQGAIVAVTGDGVNDSPALKKADIGVAMG 740
Query: 263 IAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGAC 322
I+G+DV+K+A+D+IL DDNF+SIV V GR ++D++ K + + LT N+ + +
Sbjct: 741 ISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFII 800
Query: 323 AVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNI--- 379
PL V +L ++L D + +++LA E D++ R+P + + ++
Sbjct: 801 GNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYG 860
Query: 380 ---LGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQH------------------ 418
+ QA+ F +L L G+ +
Sbjct: 861 QIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVE 920
Query: 419 ---FTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQ--F 473
T F + V + + I + ++F+ N I F A F+
Sbjct: 921 FTCHTSFFISIVVVQWADLIICKTRR--NSIFQQGMKNKILIFGLFEETALAAFLSYCPG 978
Query: 474 GREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSW 519
A L W + + L+ ++ + R+ P W
Sbjct: 979 TDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI-IRRSPG--GW 1021
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 2e-79
Identities = 82/449 (18%), Positives = 165/449 (36%), Gaps = 43/449 (9%)
Query: 58 NLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYI 117
L K + ++ + V ++I+ A GLR++++A + E W+
Sbjct: 431 ELAKASNDLSKK-VLSIIDKYAERGLRSLAVARQVVPEKTKE------SPGAPWE----- 478
Query: 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD 177
GL + + DP R + + IR+ G+ V+M+TGD + + + G+
Sbjct: 479 ---FVGL--LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 533
Query: 178 FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237
L G + + ++++ + A P KY +VK + + K
Sbjct: 534 SSALLGTHKDANLASIP-------VEELIEKADGFAGVFPEHKYEIVKKLQERK-----H 581
Query: 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297
+V +TGDG ND PALKKAD+G A+ TD A+ ASDI+LT+ S I+ AV+ R ++
Sbjct: 582 IVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQ 640
Query: 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 357
+ + + +++ + ++ F+ + + A +L + ++ D + ++ + P
Sbjct: 641 RMKNYTIYAVSIT-IRIVFGFMLIALIWEFDFSAFMVLIIAILND-GTIMTISKDRVKPS 698
Query: 358 LLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQ 417
P I T + YQ + + K G +
Sbjct: 699 ---PTPDSWKLKEIFATG----VVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNH 751
Query: 418 H-FTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGRE 476
++ ++ R + F + + + + + E
Sbjct: 752 ELMGAVYLQVSIISQALIFVTRS---RSWSFVERPGALLMIAFLIAQLIATLIAVYANWE 808
Query: 477 AFSTKSLTLEQWLWCLFFGIGTLLWGQVV 505
+ + + I T V
Sbjct: 809 FAKIRGIGWGWAGVIWLYSIVTYFPLDVF 837
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 4e-70
Identities = 81/506 (16%), Positives = 166/506 (32%), Gaps = 77/506 (15%)
Query: 26 KVTVIPRKGGGYRSLPTK-----VLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC 80
KV + G R K VL E+ +N + A
Sbjct: 457 KVVAVVESPQGERITCVKGAPLFVLKTV--------EEDHPIPEEVDQA-YKNKVAEFAT 507
Query: 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDA 140
G R++ +A + + + + G+ + DP R +
Sbjct: 508 RGFRSLGVARKR-------------------GEGSWE---ILGI--MPCMDPPRHDTYKT 543
Query: 141 IRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200
+ + + G++++M+TGD + AR + + G+ + L
Sbjct: 544 VCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSE------- 596
Query: 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260
+ A P KY +V+ + +VA+TGDG ND P+LKKAD G A
Sbjct: 597 -VYDFVEAADGFAEVFPQHKYNVVEILQQRG-----YLVAMTGDGVNDAPSLKKADTGIA 650
Query: 261 MGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIG 320
+ +D A+ A+DI+ +I+ A+ R ++ + ++ +++ +++ I +
Sbjct: 651 VE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGL- 708
Query: 321 ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNIL 380
A+ + L ++++ + D +A+LA+A + K + +
Sbjct: 709 WIAILNRSLNIELVVFIAIFAD-VATLAIAYDNAPYSQTPVKW-----------NLPKLW 756
Query: 381 GQAIYQ--LTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINAR 438
G ++ + V T + V G V+F + R
Sbjct: 757 GMSVLLGVVLAVGTWITVT---TMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR 813
Query: 439 KIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKSLTLEQWLWCLFFGIGT 498
+ S + +I+ + + F I F ++ + F G
Sbjct: 814 ---ANGPFWSSIPSWQLSGAIFLVDILATCFTIW---GWFEHSDTSIVAVVRIWIFSFGI 867
Query: 499 LLWGQVVTTVPTRKLPKILSWGRGHP 524
V + + + G
Sbjct: 868 FCIMGGVYYI-LQDSVGFDNLMHGKS 892
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 6e-31
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 43/164 (26%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
I D RP + D + K + G+ + +++GD + + ++ + I
Sbjct: 130 SFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI-------------- 175
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
+ SP DK +++ K+ + V + GDG
Sbjct: 176 -----------------Q------EYYSNLSPEDKVRIIE-----KLKQNGNKVLMIGDG 207
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
ND AL ADV AMG G D++K +DIIL ++ +++ +
Sbjct: 208 VNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 8e-30
Identities = 53/174 (30%), Positives = 74/174 (42%), Gaps = 44/174 (25%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
V+ + D +RPE +AI K + GI M+TGDN A+ +A + G+
Sbjct: 138 VIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL-------------- 183
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
D A P +K VK + + V A+ GDG
Sbjct: 184 -----------------D------DYFAEVLPHEKAEKVKEV------QQKYVTAMVGDG 214
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 299
ND PAL +ADVG A+G AGTDVA E +DI+L ++ + V R Y
Sbjct: 215 VNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-29
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 44/164 (26%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
++ + D ++ A+++ +R GI V M+TGDN +A +I+ + +
Sbjct: 157 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 202
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
D V+A P K VK + +V VA GDG
Sbjct: 203 -----------------D------LVIAEVLPHQKSEEVKKLQAKEV------VAFVGDG 233
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 234 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 276
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-27
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 43/164 (26%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
++ +EDP++ P+ I + Q++GI + M+TGD+ TA ++A GI
Sbjct: 548 LLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI-------------- 593
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
+V+A P DK +V ++ D +VA+ GDG
Sbjct: 594 -----------------K------KVVAEIMPEDKSRIVS-----ELKDKGLIVAMAGDG 625
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
ND PAL KAD+G AMG GTDVA E++ + L + I KA
Sbjct: 626 VNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKAR 668
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-27
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 44/164 (26%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
++ + D ++ A+++ +R GI V M+TGDN +A +I+ + +
Sbjct: 451 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 496
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
D V+A P K VK + +V VA GDG
Sbjct: 497 -----------------D------LVIAEVLPHQKSEEVKKLQAKEV------VAFVGDG 527
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 528 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 570
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-27
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 44/164 (26%)
Query: 126 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185
++ + D ++ A+++ +R GI V M+TGDN +A +I+ + +
Sbjct: 529 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 574
Query: 186 FNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245
D V+A P K VK + +V VA GDG
Sbjct: 575 -----------------D------LVIAEVLPHQKSEEVKKLQAKEV------VAFVGDG 605
Query: 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 606 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 648
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 8e-12
Identities = 67/526 (12%), Positives = 149/526 (28%), Gaps = 156/526 (29%)
Query: 36 GYRSLPTKVLPRSCAFIYGRDGN-LEKFTRE-MQDRLVRNVI-EPMACDGLRTI------ 86
Y+ + + AF+ D ++ + + + ++I A G +
Sbjct: 17 QYKDILSVFED---AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73
Query: 87 --SIAYRDFVPGKAEIN------QVHIDT-EPNWDDEEYI--VNNLTGLCVVGIEDPV-R 134
+ FV IN + + +P+ YI + L V + V R
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133
Query: 135 PEVPDAIRKC----QRA-GITVR-MV-TGDN---INTARSIATKC----GIL-------- 172
+ +R+ + A + + ++ +G ++ S +C I
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 173 KPGDDFLILE------------GKEFNRRVRDANGDVQQHL---------------LDKV 205
P +L+ + + ++ +Q L L V
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
Query: 206 W-PRL--------RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD 256
+ ++L T T K + D + + +++ D + +
Sbjct: 254 QNAKAWNAFNLSCKILL----T---TRFKQVTDFLSAATTTHISL--DHHSMTLTPDEVK 304
Query: 257 VGFA--MGIAGTDVAKEASDI----ILTDDNFSSIVKAVM---------WGRNVYDSIAK 301
+ D+ +E + SI+ + W D +
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRL-------SIIAESIRDGLATWDNWKHVNCDKLTT 357
Query: 302 FLQFQLTVNVVAVIVAFIGACAV-QDS---PLKAVQMLWVNL-------IMDTLASLALA 350
++ L V A +V S P + ++W ++ +++ L +L
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
Query: 351 TEMPT------PDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404
+ P P + L + K + ++I+ Y + F D +
Sbjct: 418 EKQPKESTISIPSIYLEL---KVKLENEYALHRSIVDH--YNIPKTFDS---DDLIPPYL 469
Query: 405 TG----------RGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKI 440
+ E E F ++F F F+ +KI
Sbjct: 470 DQYFYSHIGHHLKNIEHP-ERMTLFRMVFLDFRFL-------EQKI 507
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 27/120 (22%)
Query: 22 RALMKVTVIPRKGGGYRSLPTK-----VLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIE 76
R M +V+ + + L K +L C+ + +G + M + ++ V +
Sbjct: 68 RRRM--SVVVAENTEHHQLVCKGALQEILNV-CSQVR-HNGEIVPLDDIMLRK-IKRVTD 122
Query: 77 PMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLT--GLCVVGIEDPVR 134
+ GLR +++A + + + + DE ++L G + D
Sbjct: 123 TLNRQGLRVVAVATKYLPAREGDYQR---------ADE----SDLILEGY--IAFLDHHH 167
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281
E++ + GD ND P + A TD K SD + +D +
Sbjct: 171 EILVI-GDSNNDMPMFQLPVRKACPANA-TDNIKAVSDFV-SDYS 212
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 24/132 (18%)
Query: 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVR 191
+R + + I +++G + D +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIV----EKDRIY----------- 121
Query: 192 DANG---DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND 248
N D +D + K +++ + + + ++ + GD D
Sbjct: 122 -CNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPN----QYIIMI-GDSVTD 175
Query: 249 GPALKKADVGFA 260
A K +D+ FA
Sbjct: 176 VEAAKLSDLCFA 187
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 2e-04
Identities = 19/76 (25%), Positives = 26/76 (34%)
Query: 204 KVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI 263
KV R +DK K ++D + GD ND P + D F +G
Sbjct: 164 KVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS 223
Query: 264 AGTDVAKEASDIILTD 279
A+ S II
Sbjct: 224 LKHKKAQNVSSIIDVL 239
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
+V+ V GD ND L FA+ A TD AK + +L + V +
Sbjct: 242 QVLVV-GDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSHREGAVAYL 292
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 4e-04
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281
+V A GDG ND L G AMG A + K +D + T
Sbjct: 201 DVYAF-GDGLNDIEMLSFVGTGVAMGNA-HEEVKRVADFV-TKPV 242
|
| >2kne_B CAM, ATPase, Ca++ transporting, plasma membrane 4; protein/peptide, calcium pump, calmodulin, acetylation, calcium, isopeptide bond, methylation; NMR {Homo sapiens} Length = 28 | Back alignment and structure |
|---|
Score = 36.6 bits (84), Expect = 5e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 548 RAGQILWIRGLTRLQTQV 565
R GQILW RGL R+QTQ+
Sbjct: 2 RRGQILWFRGLNRIQTQI 19
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 6e-04
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281
EV V GDG ND A K A+ A + KE +D + T
Sbjct: 171 EVAHV-GDGENDLDAFKVVGYKVAVAQA-PKILKENADYV-TKKE 212
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 7e-04
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281
E ++ GDG ND L+ A +G AMG A + K A+D + T
Sbjct: 205 ETMSF-GDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYV-TAPI 246
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 591 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 99.97 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 99.97 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 99.96 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.67 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.64 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.41 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.58 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.52 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.49 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.47 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.45 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.43 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.42 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.42 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.37 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.37 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.36 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.35 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.32 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.31 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.3 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.29 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.29 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.27 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.23 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.23 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.19 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.19 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.16 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.16 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.13 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.13 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.1 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.09 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.09 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.03 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.02 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.98 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.97 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.95 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.9 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.89 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.88 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.87 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.83 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.8 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.8 | |
| 2kne_B | 28 | CAM, ATPase, Ca++ transporting, plasma membrane 4; | 98.8 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.76 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.71 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.67 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.65 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.64 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.64 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.63 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.58 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.57 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.54 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.54 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.5 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.5 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.5 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.48 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.48 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.46 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.46 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.45 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.45 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.43 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.43 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.41 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.38 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.38 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.38 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.35 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.33 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.32 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.32 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.31 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.31 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.29 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.29 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.29 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.28 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.27 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.27 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.26 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.25 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.24 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.23 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.22 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.21 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.19 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.19 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.18 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.17 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.15 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.15 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.14 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.09 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.09 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.08 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.07 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.06 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 98.04 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.03 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.0 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.98 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.95 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.86 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.82 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.76 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.75 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.74 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.7 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.65 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 97.63 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.51 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.49 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 97.37 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.31 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.19 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.15 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.04 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.87 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.67 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.65 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.59 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.53 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.52 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 96.14 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.99 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 95.7 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.56 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.52 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.27 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.17 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 93.6 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.02 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 92.81 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.71 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 87.26 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 85.3 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 84.68 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 82.17 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 80.55 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-71 Score=652.97 Aligned_cols=482 Identities=25% Similarity=0.358 Sum_probs=393.7
Q ss_pred cCCcceeeccCCcccceeeeEEeeCC---CCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRK---GGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACD 81 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~---~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 81 (591)
+++.++.++||||+||+|+ +++... ++++.+|+ ||.|+++|+.+.. +|+..|++++.++++ .+.+++|+.+
T Consensus 482 ~~~~~~~~~pF~s~rk~m~-~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~-~~~~~~~a~~ 558 (1034)
T 3ixz_A 482 ERFPKVCEIPFNSTNKFQL-SIHTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAF-QTAYLSLGGL 558 (1034)
T ss_pred HhCcceEEeeecCCCceEE-EEEEecCCCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHH-HHHHHHHHhc
Confidence 5677899999999999999 554432 36788888 9999999998875 788889999888886 5789999999
Q ss_pred cCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 82 GLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 82 GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
|+|||++|||.++.+++..+. ....+..+.+|+||+|+|+++++||+|++++++|++|+++||+|+|+|||+..|
T Consensus 559 G~RvLa~A~~~l~~~~~~~~~-----~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~t 633 (1034)
T 3ixz_A 559 GERVLGFCQLYLSEKDYPPGY-----AFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPIT 633 (1034)
T ss_pred CcHhheEeEEecChhhccccc-----ccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence 999999999999765321110 111122345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCc----------------------eEEecchhhHHhhhcccchhhHHHHhhhcCc--ceEEEecCh
Q psy8116 162 ARSIATKCGILKPGDD----------------------FLILEGKEFNRRVRDANGDVQQHLLDKVWPR--LRVLARSSP 217 (591)
Q Consensus 162 a~~ia~~~gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~~r~sp 217 (591)
|.++|+++|+..++.. ..+++|.++... ..+.+.+.... ..+++|++|
T Consensus 634 A~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--------~~~~l~~~~~~~~~~v~ar~~P 705 (1034)
T 3ixz_A 634 AKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM--------DPSELVEALRTHPEMVFARTSP 705 (1034)
T ss_pred HHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC--------CHHHHHHHHHhCCceEEEecCH
Confidence 9999999999754321 234455554332 11222222222 358999999
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~ 297 (591)
++|..+++.+ +..+++|+|+|||.||+|||+.||+|||||++|++++|++||+|+.+++++++++++++||++|+
T Consensus 706 ~~K~~iv~~l-----q~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ 780 (1034)
T 3ixz_A 706 QQKLVIVESC-----QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFD 780 (1034)
T ss_pred HHHHHHHHHH-----HHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHH
Confidence 9999999985 45589999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCC-CCCCCCHHHH
Q psy8116 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR-TKPLISKTMM 376 (591)
Q Consensus 298 ~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~-~~~~i~~~~~ 376 (591)
|++|++.|.+++|+..+++.+++.++..+.|++++|+||+|+++|++|+++|++|||++++|+|||+++ +++++++.++
T Consensus 781 ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~ 860 (1034)
T 3ixz_A 781 NLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLA 860 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHH
Confidence 999999999999999999999888888999999999999999999999999999999999999999987 6889999988
Q ss_pred HHHHH-HHHHHHHHHHHHHHHhhcc--------cCCCCCCC------------CCCCC-----CCcchhhhHHHHHHHHH
Q psy8116 377 KNILG-QAIYQLTVVFTLLFVGDKL--------LDIPTGRG------------AEFGS-----EPTQHFTVIFNTFVFMT 430 (591)
Q Consensus 377 ~~~~~-~~i~~~~~~~~~~~~~~~~--------~~~~~~~~------------~~~~~-----~~~~~~t~~f~~~v~~~ 430 (591)
...++ .++++++..|+.+++.... ++....+. ..+.. ....++|++|++++++|
T Consensus 861 ~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q 940 (1034)
T 3ixz_A 861 AYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQ 940 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHH
Confidence 77554 4777776666555432211 11100000 00000 01236899999999999
Q ss_pred HhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHHHHHHhh--ccccccccCCChhHHHHHHHHHHHHHHHHHHHHh
Q psy8116 431 LFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQVFIIQF--GREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTT 507 (591)
Q Consensus 431 ~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~--~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~ 507 (591)
+||.+++|+.+ .++|+ ++|+|+++++++++++++++++++. .+.+|++.|+++.+|++++.++++.++++|+.|+
T Consensus 941 ~~~~~~~r~~~--~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~ 1018 (1034)
T 3ixz_A 941 IADVLIRKTRR--LSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKL 1018 (1034)
T ss_pred HHHHHhhccCC--CcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999754 36675 7899999999998888888776544 4789999999999999999999999999999999
Q ss_pred hccCc
Q psy8116 508 VPTRK 512 (591)
Q Consensus 508 i~~~~ 512 (591)
+.|++
T Consensus 1019 ~~r~~ 1023 (1034)
T 3ixz_A 1019 GVRCC 1023 (1034)
T ss_pred HHHhC
Confidence 87654
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-69 Score=637.31 Aligned_cols=481 Identities=28% Similarity=0.394 Sum_probs=394.9
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCC-----cEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHH-
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGG-----GYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPM- 78 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~-----~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 78 (591)
+++.++.++||||+||||| ++++.++| ++.+|+ ||.|+++|+.+.. +++..|++++.++++ .+.+++|
T Consensus 478 ~~~~~~~~~pF~s~rk~ms-vi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~-~~~~~~~~ 554 (995)
T 3ar4_A 478 QLMKKEFTLEFSRDRKSMS-VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKI-LSVIKEWG 554 (995)
T ss_dssp HHEEEEEEEEEETTTTEEE-EEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHH-HHHHHHHH
T ss_pred hhCceEEEeecCCCCCeeE-EEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHH-HHHHHHHH
Confidence 4567889999999999999 55554444 578888 9999999998765 456788999888876 4788889
Q ss_pred -hhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCC
Q psy8116 79 -ACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGD 157 (591)
Q Consensus 79 -a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd 157 (591)
+++|+||||+|||+++..+.+. ...+....+.+|+|++|+|+++++||+||+++++|+.|+++||+++|+|||
T Consensus 555 ~a~~GlRvLa~A~k~~~~~~~~~------~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD 628 (995)
T 3ar4_A 555 TGRDTLRCLALATRDTPPKREEM------VLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGD 628 (995)
T ss_dssp HSTTCCEEEEEEEESSCCCGGGC------CTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESS
T ss_pred hhhccceEEEEEEEecCcccccc------ccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999986532110 001112356789999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCc--eEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCC
Q psy8116 158 NINTARSIATKCGILKPGDD--FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235 (591)
Q Consensus 158 ~~~ta~~ia~~~gi~~~~~~--~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~ 235 (591)
+..||.++|+++||...+.+ ..+++|.++.... .+.+.+...+..+++|++|++|.++|+.++ ..
T Consensus 629 ~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~--------~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~-----~~ 695 (995)
T 3ar4_A 629 NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLP--------LAEQREACRRACCFARVEPSHKSKIVEYLQ-----SY 695 (995)
T ss_dssp CHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSC--------HHHHHHHHHHCCEEESCCSSHHHHHHHHHH-----TT
T ss_pred CHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCC--------HHHHHHHHhhCcEEEEeCHHHHHHHHHHHH-----HC
Confidence 99999999999999764332 2366777765431 122333445678999999999999999964 44
Q ss_pred CcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy8116 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVI 315 (591)
Q Consensus 236 ~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~ 315 (591)
+++|+|+|||.||+|||++||+||||| +|++++|++||+++.+++|+++.+++++||++|+|+++++.|.+++|+..++
T Consensus 696 g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~ 774 (995)
T 3ar4_A 696 DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVV 774 (995)
T ss_dssp TCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999 8999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy8116 316 VAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLF 395 (591)
Q Consensus 316 ~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~ 395 (591)
+.+++.++..++|++++|++|+|+++|.+|+++|++++|++++|.+||+.+++++++++++++|+..|++++++.++.++
T Consensus 775 ~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 854 (995)
T 3ar4_A 775 CIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAA 854 (995)
T ss_dssp HHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999877655433
Q ss_pred HhhcccC----CC----------CCCCCCCCC------CCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHH
Q psy8116 396 VGDKLLD----IP----------TGRGAEFGS------EPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPI 455 (591)
Q Consensus 396 ~~~~~~~----~~----------~~~~~~~~~------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~ 455 (591)
+...... .. .+.+..+.. ....++|++|+++|++|+||.+|+|+.+++ .+..++++|++
T Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~-~~~~~~~~n~~ 933 (995)
T 3ar4_A 855 WWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQS-LMRMPPWVNIW 933 (995)
T ss_dssp HHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCC-TTTSCGGGCHH
T ss_pred HHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccc-hhccCCccCHH
Confidence 2110000 00 000011100 122468999999999999999999986542 23347789999
Q ss_pred HHHHHHHHHHHHHHHHh--hccccccccCCChhHHHHHHHHHHHHHHHHHHHHhhccCc
Q psy8116 456 FYSIWFITAASQVFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRK 512 (591)
Q Consensus 456 ~~~~~~~~~~~~~~~v~--~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~ 512 (591)
+++++++++++++++++ +.+.+|++.++++.+|+++++++++.+++++++|++.|++
T Consensus 934 l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 934 LLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 98888888777766654 4578999999999999999999999999999999986643
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-69 Score=635.64 Aligned_cols=481 Identities=26% Similarity=0.380 Sum_probs=393.3
Q ss_pred cCCcceeeccCCcccceeeeEEeeCC---CCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRK---GGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACD 81 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~---~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 81 (591)
+++.++.++||||+||||+ ++++.+ +|++++|+ ||.|+++|+.+.. +|+..+++++.++++ .+.+++|+++
T Consensus 477 ~~~~~~~~~pF~s~rk~ms-vi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~g~~~~l~~~~~~~~-~~~~~~~a~~ 553 (1028)
T 2zxe_A 477 DRNPKIVEIPFNSTNKYQL-SIHENEKSSESRYLLVMKGAPERILDRCSTILL-NGAEEPLKEDMKEAF-QNAYLELGGL 553 (1028)
T ss_dssp HHSCEEEEECCCTTTCEEE-EEEECSCTTTCCEEEEEEECHHHHHTTEEEECB-TTBCCBCCHHHHHHH-HHHHHHHHHT
T ss_pred HhCceEEEeccCcccceEE-EEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhc-CCCcccCCHHHHHHH-HHHHHHHHhc
Confidence 3577889999999999999 666653 46788888 9999999998754 788889999888876 5789999999
Q ss_pred cCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 82 GLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 82 GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
|+|||++|||+++.+++..+. ....+..+.+|+|++|+|+++++||+||+++++|++|+++||+|+|+|||+..|
T Consensus 554 G~RvL~~A~~~l~~~~~~~~~-----~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~t 628 (1028)
T 2zxe_A 554 GERVLGFCHFALPEDKYNEGY-----PFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 628 (1028)
T ss_dssp TCEEEEEEEEECCSTTSCTTC-----CCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred CCEEEEEEEEecCcccccccc-----ccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 999999999999764321110 001112234589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCc----------------------eEEecchhhHHhhhcccchhhHHHHhhhcCcc--eEEEecCh
Q psy8116 162 ARSIATKCGILKPGDD----------------------FLILEGKEFNRRVRDANGDVQQHLLDKVWPRL--RVLARSSP 217 (591)
Q Consensus 162 a~~ia~~~gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~r~sp 217 (591)
|.++|+++||..++.. ..+++|.++... ..+.+++...+. .+|+|++|
T Consensus 629 A~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~--------~~~~l~~~~~~~~~~v~ar~~P 700 (1028)
T 2zxe_A 629 AKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL--------STEVLDDILHYHTEIVFARTSP 700 (1028)
T ss_dssp HHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC--------CHHHHHHHHHHCSEEEEESCCH
T ss_pred HHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC--------CHHHHHHHHhhCCcEEEEEcCH
Confidence 9999999999754321 345667665432 112233332233 48999999
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~ 297 (591)
++|..+|+.+++ .+++|+|+|||.||+|||++||+|||||.+|++++|++||+++.+++|+++++++++||++|+
T Consensus 701 ~~K~~iV~~lq~-----~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ 775 (1028)
T 2zxe_A 701 QQKLIIVEGCQR-----QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 775 (1028)
T ss_dssp HHHHHHHHHHHH-----TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHH
Confidence 999999999654 478999999999999999999999999977999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCC-CCCCHHHH
Q psy8116 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTK-PLISKTMM 376 (591)
Q Consensus 298 ~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~-~~i~~~~~ 376 (591)
|+++++.|.+++|+..++..+++.++..+.|++++|++|+|+++|.+|+++|++++|++++|.++|+.++. ++++++++
T Consensus 776 ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~ 855 (1028)
T 2zxe_A 776 NLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLI 855 (1028)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHH
Confidence 99999999999999999888888888889999999999999999999999999999999999999987665 99999988
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhhcccCC---------------CC-----CCCCCCCC-----CCcchhhhHHHHHHHHH
Q psy8116 377 KN-ILGQAIYQLTVVFTLLFVGDKLLDI---------------PT-----GRGAEFGS-----EPTQHFTVIFNTFVFMT 430 (591)
Q Consensus 377 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~~~~~-----~~~~~~t~~f~~~v~~~ 430 (591)
.. ++..|++++++.|+.+++.....+. .. +++..+.. ....++|++|++++++|
T Consensus 856 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q 935 (1028)
T 2zxe_A 856 SMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQ 935 (1028)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 77 5567888887776665432111110 00 00000000 00257899999999999
Q ss_pred HhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc--cccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 431 LFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG--REAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 431 ~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
+||.+++|+.+ .++|+..++|+++++++++++++++++++.+ +.+|++.|+++.+|++++.++++.++++++.|++
T Consensus 936 ~~~~~~~r~~~--~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 936 WADLIICKTRR--NSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013 (1028)
T ss_dssp HHHHHHTTCSS--SCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCC--cchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999754 3667655899999998888888888777654 6899999999999999999999999999999988
Q ss_pred ccC
Q psy8116 509 PTR 511 (591)
Q Consensus 509 ~~~ 511 (591)
.|+
T Consensus 1014 ~r~ 1016 (1028)
T 2zxe_A 1014 IRR 1016 (1028)
T ss_dssp HHH
T ss_pred HHc
Confidence 554
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-60 Score=544.23 Aligned_cols=436 Identities=17% Similarity=0.224 Sum_probs=339.6
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.+.++..+||+|+||+|+ ++++.++|++.+|+ ||.|+++|+. ..+++++.++++ .+.+++|+++|+|
T Consensus 441 ~~~~~~~~~pF~s~~k~ms-~iv~~~~g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~-~~~~~~~a~~G~R 511 (920)
T 1mhs_A 441 SKYKVLQFHPFDPVSKKVV-AVVESPQGERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAY-KNKVAEFATRGFR 511 (920)
T ss_dssp SCCCEEEEEEEETTTTEEE-EEECCSSSSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHH-HHHHHHHHTSSCC
T ss_pred cccceeEEeeccCCCCeEE-EEEEeCCCcEEEEEeCCHHHHHHhccc-------cCCCCHHHHHHH-HHHHHHHHhCCCE
Confidence 4567788899999999999 66666667777776 9999999973 235677767665 5788999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||.. |++++|+|+++++||+||+++++|++|+++||+++|+|||+..||.+
T Consensus 512 vL~vA~~~~------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~a 567 (920)
T 1mhs_A 512 SLGVARKRG------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARE 567 (920)
T ss_dssp CCEECCCSS------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHH
T ss_pred EEEEEEecc------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHH
Confidence 999998731 35789999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCC--CceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEE
Q psy8116 165 IATKCGILKPG--DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVT 242 (591)
Q Consensus 165 ia~~~gi~~~~--~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~i 242 (591)
+|+++||.... ...++++|. .....+.+.+...+..+++|++|+||.++|+.+ +..|++|+|+
T Consensus 568 IA~~lGI~~~~~~~~~~~~~g~----------~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~L-----q~~g~~Vam~ 632 (920)
T 1mhs_A 568 TSRQLGLGTNIYNAERLGLGGG----------GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEIL-----QQRGYLVAMT 632 (920)
T ss_dssp HHHHHTSSCSCCCSSSSSSCBC----------CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHH-----HTTTCCCEEC
T ss_pred HHHHcCCCccccCccceeecCc----------ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHH-----HhCCCeEEEE
Confidence 99999996311 111223332 111223345566777899999999999999996 4458999999
Q ss_pred CCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhc
Q psy8116 243 GDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGAC 322 (591)
Q Consensus 243 GDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~ 322 (591)
|||.||+|||++||+||||| +|++++|++||+++.+++|+++++++++||++|+|+++++.|.++.|+....+..+...
T Consensus 633 GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~ 711 (920)
T 1mhs_A 633 GDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIA 711 (920)
T ss_dssp CCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 79999999999999999999999999999999999999999999999976443333232
Q ss_pred cCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q psy8116 323 AVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLD 402 (591)
Q Consensus 323 ~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 402 (591)
+. +.|+++.|++|+|+++|. |++++++++++.+ ++|++++.+ .++..++..|++.++..++.++.... ++
T Consensus 712 ~~-~~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 781 (920)
T 1mhs_A 712 IL-NRSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMYA-QG 781 (920)
T ss_dssp SC-SCCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHTT-TT
T ss_pred HH-hccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 22 334899999999999997 8999999998765 566554432 22223344555554444333322211 10
Q ss_pred CCCCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccccC
Q psy8116 403 IPTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKS 482 (591)
Q Consensus 403 ~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~~~ 482 (591)
... .........+|++|++++++|+|+.+++|+.+ ++|++ +.|++++.++++..++++++.+++ +|++.|
T Consensus 782 ~~~----~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~f~~~~ 851 (920)
T 1mhs_A 782 ENG----GIVQNFGNMDEVLFLQISLTENWLIFITRANG---PFWSS-IPSWQLSGAIFLVDILATCFTIWG--WFEHSD 851 (920)
T ss_dssp TTC----CSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS---SCSCC-SCTHHHHHHHHHHHHHHHHHHSSS--STTSCS
T ss_pred ccc----cccchhhHHHHHHHHHHHHHHHHHHHHhccch---hhhcC-chHHHHHHHHHHHHHHHHHHHHhh--hhccCC
Confidence 001 11112235789999999999999999999754 35554 478888777777777777766655 899999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhccCc
Q psy8116 483 LTLEQWLWCLFFGIGTLLWGQVVTTVPTRK 512 (591)
Q Consensus 483 l~~~~w~~~l~~~~~~ll~~eiik~i~~~~ 512 (591)
+++.+|+++++++++.+++.++.|++-.++
T Consensus 852 l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 852 TSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp HHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999876554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-58 Score=526.38 Aligned_cols=452 Identities=17% Similarity=0.243 Sum_probs=321.9
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.+.++.++||+|+||+|+ ++.+..+|++++|+ ||.|+++|+.. ++.+++ +.+.+++|+++|+|
T Consensus 390 ~~~~~~~~~pF~s~~k~~s-v~~~~~~g~~~~~~KGa~e~il~~c~~~-----------~~~~~~-~~~~~~~~a~~G~r 456 (885)
T 3b8c_A 390 AGIREVHFLPFNPVDKRTA-LTYIDGSGNWHRVSKGAPEQILELAKAS-----------NDLSKK-VLSIIDKYAERGLR 456 (885)
T ss_dssp CSSCCBCCCCCCTTTCCCC-CBBCSSSSCBCBCCCCSGGGTSSSSCCC-----------STTTTT-HHHHHHHHTTTTCE
T ss_pred hcCceeecccCCcccceEE-EEEEecCCcEEEEEeCCHHHHHHhccCc-----------hhhHHH-HHHHHHHHHhCCCe
Confidence 4567788999999999999 55554567777776 99999999731 111112 24678889999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++ .+..|+|++|+|+++++||+|||++++|++|+++||+++|+|||+..||.+
T Consensus 457 vl~vA~~~~~~~~----------------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~ 520 (885)
T 3b8c_A 457 SLAVARQVVPEKT----------------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 520 (885)
T ss_dssp EEEECCBCCCSSS----------------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTH
T ss_pred EEEEEEecccccc----------------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHH
Confidence 9999999886431 123468999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||.......-.+.|.+++....+ ..+++...+..+++|++|+||.++|+.+++ .+++|+|+||
T Consensus 521 iA~~lGi~~~~~~~~~l~g~~~~~~~~~-------~~l~~~~~~~~v~arv~P~~K~~iV~~lq~-----~g~~Vam~GD 588 (885)
T 3b8c_A 521 TGRRLGMGTNMYPSSALLGTHKDANLAS-------IPVEELIEKADGFAGVFPEHKYEIVKKLQE-----RKHIVGMTGD 588 (885)
T ss_dssp HHHTTTCTTCCSTTSSCCBGGGGTTSCC-------SCHHHHHHTSCCEECCCHHHHHHHHHHHHH-----TTCCCCBCCC
T ss_pred HHHHhCCccccCCcceeeccccccccch-------hHHHHHHhhCcEEEEECHHHHHHHHHHHHH-----CCCeEEEEcC
Confidence 9999999542101113445554331111 112334445679999999999999999754 4789999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|||++||+||||| +|++++|++||+++.+++|+++++++++||++|+|+++++.|.+++|+..++..+...+ .
T Consensus 589 GvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~-~ 666 (885)
T 3b8c_A 589 GVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL-I 666 (885)
T ss_dssp SSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS-S
T ss_pred CchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c
Confidence 999999999999999999 79999999999999999999999999999999999999999999999865443333333 4
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|++|+|++|+|+++|..+ ++++++++.+. ++| +...+ +..+..++..|++.++..+++++++......+
T Consensus 667 ~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 738 (885)
T 3b8c_A 667 WEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFS 738 (885)
T ss_dssp CSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTT
T ss_pred cCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 567899999999999999865 88888876542 233 22222 44455566667666665554433221100000
Q ss_pred CCCCCC-CCCCCcchhhh-HHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccccC
Q psy8116 405 TGRGAE-FGSEPTQHFTV-IFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKS 482 (591)
Q Consensus 405 ~~~~~~-~~~~~~~~~t~-~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~~~ 482 (591)
...+.+ ........+|. +|.++++.|+ +.+++|+.+ .++|+.. .|++++..++..++++++.++....+|++.|
T Consensus 739 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (885)
T 3b8c_A 739 DTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS--WSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRG 814 (885)
T ss_dssp CCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT--TTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCC
T ss_pred cccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC--CCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCC
Confidence 000100 00001234344 4556667775 789999754 2333322 3433333333333334434443344567999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhccCccc
Q psy8116 483 LTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLP 514 (591)
Q Consensus 483 l~~~~w~~~l~~~~~~ll~~eiik~i~~~~~~ 514 (591)
+++.+|+++++++++.+++.|+.|++.++.+.
T Consensus 815 l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~ 846 (885)
T 3b8c_A 815 IGWGWAGVIWLYSIVTYFPLDVFKFAIRYILS 846 (885)
T ss_dssp CTTTTHHHHHHHTGGGTHHHHHHHHHHTTC--
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999988666443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=289.65 Aligned_cols=204 Identities=32% Similarity=0.471 Sum_probs=176.3
Q ss_pred HHHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEE
Q psy8116 72 RNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITV 151 (591)
Q Consensus 72 ~~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v 151 (591)
.+..++++.+|+|++++|+ |.+++|+++++|++|++++++|++|+++|+++
T Consensus 523 ~~~~~~~~~~G~~vl~va~-----------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v 573 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAV-----------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEI 573 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEE-----------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhcCCeEEEEEE-----------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeE
Confidence 3567889999999999995 34799999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+|+|||+..+|.++|+++|+. .++++.+|++|.++++.+++
T Consensus 574 ~mlTGd~~~~a~~ia~~lgi~-------------------------------------~v~a~~~P~~K~~~v~~l~~-- 614 (736)
T 3rfu_A 574 VMLTGDSKRTAEAVAGTLGIK-------------------------------------KVVAEIMPEDKSRIVSELKD-- 614 (736)
T ss_dssp EEECSSCHHHHHHHHHHHTCC-------------------------------------CEECSCCHHHHHHHHHHHHH--
T ss_pred EEECCCCHHHHHHHHHHcCCC-------------------------------------EEEEecCHHHHHHHHHHHHh--
Confidence 999999999999999999993 27789999999999999654
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
.++.|+|+|||.||+|||+.||+||||| +++|+++++||+++.+++++++.+++++||++++++++++.|.+.+|+
T Consensus 615 ---~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~ 690 (736)
T 3rfu_A 615 ---KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNV 690 (736)
T ss_dssp ---HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc---CC-CCchhHHHHHHHHHHHhhhhhhh
Q psy8116 312 VAVIVAFIGACA---VQ-DSPLKAVQMLWVNLIMDTLASLA 348 (591)
Q Consensus 312 ~~~~~~~~~~~~---~~-~~pl~~~q~l~~nli~~~~~~l~ 348 (591)
+.+.++. |.++ +. -+|+-+...+..+.+...+-++-
T Consensus 691 ~~iplAa-g~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslr 730 (736)
T 3rfu_A 691 LGVPLAA-GVLYPLTGLLLSPMIAAAAMALSSVSVIINALR 730 (736)
T ss_dssp HHHHHHH-TSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-HHHHHhccchhhHHHHHHHHHhhHHHHHHHHHH
Confidence 9888775 2221 21 24655555555555555444443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=286.57 Aligned_cols=206 Identities=30% Similarity=0.403 Sum_probs=178.2
Q ss_pred HHHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEE
Q psy8116 72 RNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITV 151 (591)
Q Consensus 72 ~~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v 151 (591)
.+.+++++.+|+|++++|+ |++++|+++++|++||+++++|++|+++|+++
T Consensus 504 ~~~~~~~~~~g~~~~~va~-----------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v 554 (723)
T 3j09_A 504 ELALEKLEREAKTAVIVAR-----------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 554 (723)
T ss_dssp HHHHHHHHTTTCEEEEEEE-----------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhcCCeEEEEEE-----------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEE
Confidence 4567889999999999994 45899999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+|+|||+..+|.++|+++|+. .++++.+|++|..+++.+
T Consensus 555 ~~~TGd~~~~a~~ia~~lgi~-------------------------------------~~~~~~~P~~K~~~v~~l---- 593 (723)
T 3j09_A 555 GMITGDNWRSAEAISRELNLD-------------------------------------LVIAEVLPHQKSEEVKKL---- 593 (723)
T ss_dssp EEECSSCHHHHHHHHHHHTCS-------------------------------------EEECSCCTTCHHHHHHHH----
T ss_pred EEECCCCHHHHHHHHHHcCCc-------------------------------------EEEccCCHHHHHHHHHHH----
Confidence 999999999999999999993 378899999999999985
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
+.. +.|+|+|||.||+|||+.||+||||| ++++.++++||+++.+++++++.+++++||+.++++++++.|.+++|+
T Consensus 594 -~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~ 670 (723)
T 3j09_A 594 -QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNV 670 (723)
T ss_dssp -TTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334 78999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccC---CCCchhHHHHHHHHHHHhhhhhhhhc
Q psy8116 312 VAVIVAFIGACAV---QDSPLKAVQMLWVNLIMDTLASLALA 350 (591)
Q Consensus 312 ~~~~~~~~~~~~~---~~~pl~~~q~l~~nli~~~~~~l~l~ 350 (591)
+.+.+++.+.... .-+|..+...+..+.+...+-++-|.
T Consensus 671 ~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~ 712 (723)
T 3j09_A 671 ILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLR 712 (723)
T ss_dssp HHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCC
T ss_pred HHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHhc
Confidence 9888777553322 23454444455555555555555553
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=281.35 Aligned_cols=206 Identities=30% Similarity=0.403 Sum_probs=176.9
Q ss_pred HHHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEE
Q psy8116 72 RNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITV 151 (591)
Q Consensus 72 ~~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v 151 (591)
++..++++.+|+|++++|+ |++++|+++++|+++|+++++|++|+++|+++
T Consensus 426 ~~~~~~~~~~g~~~l~va~-----------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v 476 (645)
T 3j08_A 426 ELALEKLEREAKTAVIVAR-----------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 476 (645)
T ss_dssp HHHHHHHHTTTCCCEEEEE-----------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhcCCeEEEEEE-----------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEE
Confidence 4567889999999999984 45799999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+|+|||+..+|.++++++|+. .++++.+|++|..+++.+
T Consensus 477 ~~~TGd~~~~a~~ia~~lgi~-------------------------------------~~~~~~~P~~K~~~v~~l---- 515 (645)
T 3j08_A 477 GMITGDNWRSAEAISRELNLD-------------------------------------LVIAEVLPHQKSEEVKKL---- 515 (645)
T ss_dssp EEECSSCHHHHHHHHHHHTCS-------------------------------------EEECSCCTTCHHHHHHHH----
T ss_pred EEEeCCCHHHHHHHHHHcCCC-------------------------------------EEEEeCCHHhHHHHHHHH----
Confidence 999999999999999999993 378899999999999985
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
+.. +.|+|+|||.||+|||+.||+||||| ++++.++++||+++.+++++++.+++++||+.++++++++.|.+++|+
T Consensus 516 -~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~ 592 (645)
T 3j08_A 516 -QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNV 592 (645)
T ss_dssp -TTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334 78999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccC---CCCchhHHHHHHHHHHHhhhhhhhhc
Q psy8116 312 VAVIVAFIGACAV---QDSPLKAVQMLWVNLIMDTLASLALA 350 (591)
Q Consensus 312 ~~~~~~~~~~~~~---~~~pl~~~q~l~~nli~~~~~~l~l~ 350 (591)
+.+.+++.+.... .-+|..+...+..+.+...+-++-+.
T Consensus 593 ~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~ 634 (645)
T 3j08_A 593 ILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLR 634 (645)
T ss_dssp HHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCC
T ss_pred HHHHHHHHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHhc
Confidence 9877776443221 23444445555555555555555443
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=161.48 Aligned_cols=109 Identities=12% Similarity=0.179 Sum_probs=91.5
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.|.++.++||||+||||| ++++.++|++++|+ ||.|+++|+.+.. +|+..|++++.++++ .+.+++||++|+|
T Consensus 54 ~~~~~~~eiPFds~rKrms-vv~~~~~g~~~l~~KGApE~IL~~C~~~~~-~g~~~~l~~~~~~~i-~~~~~~la~~GlR 130 (170)
T 3gwi_A 54 SRWQKIDEIPFDFERRRMS-VVVAENTEHHQLVCKGALQEILNVCSQVRH-NGEIVPLDDIMLRKI-KRVTDTLNRQGLR 130 (170)
T ss_dssp HHSEEEEEECCCTTTCEEE-EEEESSSSEEEEEEEECHHHHHTTEEEEEE-TTEEEECCHHHHHHH-HHHHHHHHHTTCE
T ss_pred hcCeEEeeEecCcccCcEE-EEEEeCCCCEEEEEcCCcHHHHHHhHHHhc-CCCcccCCHHHHHHH-HHHHHHHHhCCCE
Confidence 5678899999999999999 66676677888888 9999999998864 889999999999887 5789999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCC
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDP 132 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~ 132 (591)
|||+|||+++..+. .. ..+.|+||+|+|++|+-|.
T Consensus 131 vLavA~k~~~~~~~-----------~~--~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 131 VVAVATKYLPAREG-----------DY--QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EEEEEEEEEECCSS-----------CC--CGGGSCSEEEEEEEEEEC-
T ss_pred EEEEEEEECCCCcc-----------cc--CccccCCcEEEehhccccc
Confidence 99999999976421 11 1235899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-17 Score=169.11 Aligned_cols=147 Identities=14% Similarity=0.172 Sum_probs=110.7
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh-cC
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV-WP 207 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~-~~ 207 (591)
..++++|+++++++.|+++|+++.|+||+...++.++++++|+..++.... .+...+.. .. .. ... .+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~-~n~l~~~~-----~~-~~----~~~~~~ 206 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV-SNFMDFDE-----NG-VL----KGFKGE 206 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEE-EECEEECT-----TS-BE----EEECSS
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEE-eeeEEEcc-----cc-ee----Eecccc
Confidence 357999999999999999999999999999999999999999965432222 11111100 00 00 000 01
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhh---cCCeeeeeCC------CccHHHHhccccccc
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALK---KADVGFAMGI------AGTDVAKEASDIILT 278 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk---~A~vGiamg~------~~~~~ak~aad~vl~ 278 (591)
....+++..|.+|...+.. ++..++.|+++|||.||+||++ .||+|+|||. ++++.+++++|+|+.
T Consensus 207 ~i~~~~k~~~~~k~~~~~~-----~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~ 281 (297)
T 4fe3_A 207 LIHVFNKHDGALKNTDYFS-----QLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 281 (297)
T ss_dssp CCCTTCHHHHHHTCHHHHH-----HTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEE
T ss_pred ccchhhcccHHHHHHHHHH-----hhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEE
Confidence 2234566677788777766 4567788888899999999955 9999999995 577888999999999
Q ss_pred CCChhHHHHHHHH
Q psy8116 279 DDNFSSIVKAVMW 291 (591)
Q Consensus 279 ~~~~~~i~~~i~~ 291 (591)
+|++..++.+|.+
T Consensus 282 ~d~~~~v~~~il~ 294 (297)
T 4fe3_A 282 KEESLEVVNSILQ 294 (297)
T ss_dssp TCCBCHHHHHHHH
T ss_pred CCCChHHHHHHHH
Confidence 9999999998874
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=7.7e-16 Score=154.30 Aligned_cols=145 Identities=37% Similarity=0.524 Sum_probs=118.6
Q ss_pred CcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 120 ~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
+..++|.+.+.++++|++.++++.|++.|+++.++||++...+..+++.+|+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 185 (280)
T 3skx_A 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-------------------------- 185 (280)
T ss_dssp TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh--------------------------
Confidence 346889999999999999999999999999999999999999999999999831
Q ss_pred HHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccC
Q psy8116 200 HLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~ 279 (591)
.|....|.+|...++.+.+. . .++++||+.||++|++.||+|++|| ++++..+++||+++..
T Consensus 186 -----------~f~~~~~~~k~~~~k~~~~~-----~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~ 247 (280)
T 3skx_A 186 -----------YFAEVLPHEKAEKVKEVQQK-----Y-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVR 247 (280)
T ss_dssp -----------EECSCCGGGHHHHHHHHHTT-----S-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSS
T ss_pred -----------HhHhcCHHHHHHHHHHHHhc-----C-CEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeC
Confidence 34456688999999987554 2 4578899999999999999999999 5777778999999988
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8116 280 DNFSSIVKAVMWGRNVYDSIAKFLQFQLT 308 (591)
Q Consensus 280 ~~~~~i~~~i~~gR~~~~~i~~~~~f~l~ 308 (591)
++++++.+++..+|..+.++++.+.|.+.
T Consensus 248 ~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 248 NDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CCTHHHHHHHHHHHTCCC-----------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988877653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.5e-17 Score=163.95 Aligned_cols=141 Identities=26% Similarity=0.474 Sum_probs=124.5
Q ss_pred ccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchh
Q psy8116 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDV 197 (591)
Q Consensus 118 e~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~ 197 (591)
..+-.+.|.+.+.|+++|++.++|+.|+++|++++|+||++..++..+++++|+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------ 177 (263)
T 2yj3_A 122 YINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------ 177 (263)
Confidence 34567899999999999999999999999999999999999999999999999831
Q ss_pred hHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccc
Q psy8116 198 QQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 198 ~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl 277 (591)
+|....|++|..+++. ++..++.++|+|||.||++|++.||+|+++| ++++.+++.||+++
T Consensus 178 -------------~f~~~~p~~k~~~~~~-----l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~ 238 (263)
T 2yj3_A 178 -------------YYSNLSPEDKVRIIEK-----LKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIIL 238 (263)
Confidence 2233348889888887 4556678999999999999999999999999 67888899999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHH
Q psy8116 278 TDDNFSSIVKAVMWGRNVYDSIAK 301 (591)
Q Consensus 278 ~~~~~~~i~~~i~~gR~~~~~i~~ 301 (591)
.++++..+.+++..+|..+.+|++
T Consensus 239 ~~~~l~~l~~~l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 239 VSNDIGTLLGLIKNRKRLSNAIPS 262 (263)
Confidence 888999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.58 E-value=9.7e-15 Score=147.96 Aligned_cols=156 Identities=33% Similarity=0.523 Sum_probs=125.7
Q ss_pred HHHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEE
Q psy8116 72 RNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITV 151 (591)
Q Consensus 72 ~~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v 151 (591)
++..+.+..+|.+++++++ |.+++|.+..++++.|++.++|+.|+++|+++
T Consensus 132 ~~~~~~~~~~g~~~i~~~~-----------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~ 182 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVAR-----------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 182 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEE-----------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeE
Confidence 3456678889999998884 22678888889999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
.++||++...+..+++.+|+.. .|....|..|..+++.+
T Consensus 183 ~i~T~~~~~~~~~~l~~~gl~~-------------------------------------~f~~i~~~~K~~~~~~l---- 221 (287)
T 3a1c_A 183 GMITGDNWRSAEAISRELNLDL-------------------------------------VIAEVLPHQKSEEVKKL---- 221 (287)
T ss_dssp EEECSSCHHHHHHHHHHHTCSE-------------------------------------EECSCCTTCHHHHHHHH----
T ss_pred EEEeCCCHHHHHHHHHHhCCce-------------------------------------eeeecChHHHHHHHHHH----
Confidence 9999999999999999999831 23334578898888774
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIA 300 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~ 300 (591)
+.. +.++++||+.||++|.+.||++++++ ++.+..+..||+++.++++..+.+++..+|.++.+|+
T Consensus 222 -~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 222 -QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp -TTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred -hcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 344 77888899999999999999999998 4555557789999977799999999999999988874
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.52 E-value=7.5e-14 Score=136.50 Aligned_cols=155 Identities=17% Similarity=0.148 Sum_probs=113.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH----hh-hcc-----------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR----RV-RDA----------- 193 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~----~~-~~~----------- 193 (591)
+.++.+++.++|++|+++|++++++|||+...+..+++++|+. .++++.+|..+.. .+ ...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~---~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~ 96 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN---GPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 96 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC---CeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHH
Confidence 3468899999999999999999999999999999999999984 2466666654421 00 000
Q ss_pred --------------------------cchhhHHHHhhhcCcceEE-----EecCh--hhHHHHHHHHHHhhcCCCCcEEE
Q psy8116 194 --------------------------NGDVQQHLLDKVWPRLRVL-----ARSSP--TDKYTLVKGIIDSKVSDSREVVA 240 (591)
Q Consensus 194 --------------------------~~~~~~~~l~~~~~~~~v~-----~r~sp--~~K~~~v~~l~~~~~~~~~~~va 240 (591)
..+...+..+. . .+.+. ....| .+|+..++.+++. ++...+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~-~~~~~~~~~ 173 (227)
T 1l6r_A 97 SKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAES-R-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEM-YSLEYDEIL 173 (227)
T ss_dssp TTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHT-T-TEEEEEETTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEE
T ss_pred HHHhcCCccccccceecccceEEecCCHHHHHHHHHh-c-CEEEEecCcEEEEecCCCCHHHHHHHHHHH-hCcCHHHEE
Confidence 00001111111 1 22222 12224 6999999999887 454555677
Q ss_pred EECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 241 VTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 241 ~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
++||+.||.+|++.|++|+||+ ++.+.+|++||+++.+++.+++.+++++
T Consensus 174 ~iGD~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 174 VIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp EECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred EECCcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 8899999999999999999999 5677789999999998899999988864
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-13 Score=137.21 Aligned_cols=159 Identities=21% Similarity=0.276 Sum_probs=112.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH----------------------H
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN----------------------R 188 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~----------------------~ 188 (591)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+.......++.+|..+. +
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 357889999999999999999999999999999999999974223344444443211 0
Q ss_pred hhhcc------------------------------------------------------cchhhH---HHHhhhc-Ccce
Q psy8116 189 RVRDA------------------------------------------------------NGDVQQ---HLLDKVW-PRLR 210 (591)
Q Consensus 189 ~~~~~------------------------------------------------------~~~~~~---~~l~~~~-~~~~ 210 (591)
..... ..+... +.+.+.. ..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 00000 000000 1111111 2222
Q ss_pred EE-E-----ecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCCh
Q psy8116 211 VL-A-----RSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 211 v~-~-----r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
+. + ...| .+|+..++.+++++ +...+.++++||+.||++|++.|++|+||| ++.+.+|++||+++.+++.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~l-gi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLENI-GMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGG
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHHc-CCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCC
Confidence 22 1 2233 39999999999985 555556667799999999999999999999 6788889999999999999
Q ss_pred hHHHHHHHH
Q psy8116 283 SSIVKAVMW 291 (591)
Q Consensus 283 ~~i~~~i~~ 291 (591)
+++.++|++
T Consensus 259 ~Gv~~~i~~ 267 (279)
T 4dw8_A 259 DGVAEAIER 267 (279)
T ss_dssp THHHHHHHH
T ss_pred cHHHHHHHH
Confidence 999998874
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=137.80 Aligned_cols=158 Identities=20% Similarity=0.257 Sum_probs=99.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH-------------------h--
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR-------------------R-- 189 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~-------------------~-- 189 (591)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+....++.+|. +.. .
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~~~~~~~~~~~~~~~~~~~i~~ 99 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQTISGKVLTNHSLTYEDYIDLEA 99 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEETTSCEEEECCCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEECCCCCEEEecCCCHHHHHHHHH
Confidence 357889999999999999999999999999999999999986544456666654 210 0
Q ss_pred -hhcc---------c-----------------------------------c-----------hhhHHHHhhhc---C-cc
Q psy8116 190 -VRDA---------N-----------------------------------G-----------DVQQHLLDKVW---P-RL 209 (591)
Q Consensus 190 -~~~~---------~-----------------------------------~-----------~~~~~~l~~~~---~-~~ 209 (591)
.... . . +......+.+. . ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 179 (279)
T 3mpo_A 100 WARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRF 179 (279)
T ss_dssp HHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHE
T ss_pred HHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCE
Confidence 0000 0 0 00000011100 0 01
Q ss_pred eEE------EecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 210 RVL------ARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v~------~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.+. ....| .+|+..++.++++ ++...+.++++||+.||++|++.|++|+||| ++.+.+|++||+++.+++
T Consensus 180 ~~~~s~~~~~ei~~~~~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~ 257 (279)
T 3mpo_A 180 SVVQSAPYFIEVMNRRASKGGTLSELVDQ-LGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNA 257 (279)
T ss_dssp EEECCSSSEEEEEESSCCHHHHHHHHHHH-TTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC----
T ss_pred EEEEecCceEEEecCCCChHHHHHHHHHH-cCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCC
Confidence 111 11122 3699999999998 4555566777799999999999999999999 567777999999999999
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 258 e~Gv~~~i~~ 267 (279)
T 3mpo_A 258 ENGVAAAIRK 267 (279)
T ss_dssp --CHHHHHC-
T ss_pred ccHHHHHHHH
Confidence 9999988863
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.6e-13 Score=136.04 Aligned_cols=156 Identities=15% Similarity=0.207 Sum_probs=108.7
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH------------------Hhhh-
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN------------------RRVR- 191 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~------------------~~~~- 191 (591)
..+.+.+.++|++++++|++|+++|||+...+..+.+.+|+. ...++.+|..+. +.+.
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~---~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~ 113 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR---SYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEI 113 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC---CEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC---ccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 457889999999999999999999999999999999999984 233444443211 1100
Q ss_pred --cc------------------------------------------------------cchhhH---HHHhhhc-CcceE
Q psy8116 192 --DA------------------------------------------------------NGDVQQ---HLLDKVW-PRLRV 211 (591)
Q Consensus 192 --~~------------------------------------------------------~~~~~~---~~l~~~~-~~~~v 211 (591)
.. ..+... +.+.+.+ ....+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~ 193 (285)
T 3pgv_A 114 VRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNV 193 (285)
T ss_dssp TTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEE
T ss_pred HhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEE
Confidence 00 000000 1111111 11111
Q ss_pred E------EecC--hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc--cccCCC
Q psy8116 212 L------ARSS--PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI--ILTDDN 281 (591)
Q Consensus 212 ~------~r~s--p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~--vl~~~~ 281 (591)
. .... ..+|+..++.++++ ++...+.++++||+.||++|++.|++||||| ++.+.+|++||+ ++.+++
T Consensus 194 ~~s~~~~~ei~~~~~~K~~al~~l~~~-lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~ 271 (285)
T 3pgv_A 194 SFSTLTCLEVMAGGVSKGHALEAVAKM-LGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNA 271 (285)
T ss_dssp EESSTTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGG
T ss_pred EEeCCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCC
Confidence 1 1122 34799999999998 4555566677799999999999999999999 678888999985 677888
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 272 edGva~~i~~ 281 (285)
T 3pgv_A 272 DDAVPRYLRK 281 (285)
T ss_dssp GTHHHHHHHH
T ss_pred cchHHHHHHH
Confidence 9999988874
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-13 Score=130.58 Aligned_cols=142 Identities=15% Similarity=0.227 Sum_probs=113.1
Q ss_pred EEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHH
Q psy8116 122 TGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHL 201 (591)
Q Consensus 122 ~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~ 201 (591)
..++...+.|.+ +|+.|+++|+++.++||++...+..+++++|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 344555554433 9999999999999999999999999999999832
Q ss_pred HhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 202 LDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 202 l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.|.. ..+|...++.+++. ++...+.++++||+.||++|++.||+|++++ ++.+.+++.||+++.+++
T Consensus 88 ---------~f~~--~~~K~~~~~~~~~~-~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~ 154 (189)
T 3mn1_A 88 ---------LFQG--REDKLVVLDKLLAE-LQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQG 154 (189)
T ss_dssp ---------EECS--CSCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCT
T ss_pred ---------HhcC--cCChHHHHHHHHHH-cCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCC
Confidence 1111 16788888888877 4556677888899999999999999999999 578888999999998764
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8116 282 ----FSSIVKAVMWGRNVYDSIAKFLQFQLTVN 310 (591)
Q Consensus 282 ----~~~i~~~i~~gR~~~~~i~~~~~f~l~~n 310 (591)
...+.+.+..+|..+.++++.+.|.+.+|
T Consensus 155 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 155 GEGAAREFCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp TTTHHHHHHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred CCcHHHHHHHHHHHccCcHHHHHHHHhcccccc
Confidence 55677778889999999999988887766
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.42 E-value=6e-13 Score=134.31 Aligned_cols=72 Identities=18% Similarity=0.168 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++||||| ++.+.+|++||+++.+++.+++.++|++
T Consensus 210 ~~K~~~l~~l~~~l-gi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDRF-DLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHHT-TCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHh-CCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 37999999999984 555556677799999999999999999999 6788889999999999999999998864
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-12 Score=130.06 Aligned_cols=156 Identities=19% Similarity=0.267 Sum_probs=110.7
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH---------------------h
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR---------------------R 189 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~---------------------~ 189 (591)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+. ...++.+|..+.. .
T Consensus 22 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~---~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~ 98 (290)
T 3dnp_A 22 GKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD---AKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQV 98 (290)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC---SCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC---CeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHH
Confidence 357889999999999999999999999999999999999884 2444444432210 0
Q ss_pred hhcc---------------------------------------------------------------cchhhHHHH---h
Q psy8116 190 VRDA---------------------------------------------------------------NGDVQQHLL---D 203 (591)
Q Consensus 190 ~~~~---------------------------------------------------------------~~~~~~~~l---~ 203 (591)
..+. ..+...... .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~ 178 (290)
T 3dnp_A 99 LESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETIT 178 (290)
T ss_dssp HHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHH
T ss_pred HHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHH
Confidence 0000 000000000 1
Q ss_pred hhcCcceEEE------e--cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc
Q psy8116 204 KVWPRLRVLA------R--SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 275 (591)
Q Consensus 204 ~~~~~~~v~~------r--~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~ 275 (591)
...+.+.+.. . ....+|+..++.+++++ +...+.++++||+.||++|++.|++|+||| ++.+.+|++||+
T Consensus 179 ~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l-gi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~ 256 (290)
T 3dnp_A 179 KAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASEL-GLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADW 256 (290)
T ss_dssp HHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHT-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSE
T ss_pred hhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHc-CCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCE
Confidence 1112222221 1 12248999999999984 555556667799999999999999999999 678888999999
Q ss_pred cccCCChhHHHHHHHH
Q psy8116 276 ILTDDNFSSIVKAVMW 291 (591)
Q Consensus 276 vl~~~~~~~i~~~i~~ 291 (591)
++.+++.+++.++|++
T Consensus 257 v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 257 VTRSNDEQGVAYMMKE 272 (290)
T ss_dssp ECCCTTTTHHHHHHHH
T ss_pred ECCCCCccHHHHHHHH
Confidence 9999999999999874
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=129.99 Aligned_cols=72 Identities=22% Similarity=0.193 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++||||| ++.+.+|++||+++.+++.+++.++|++
T Consensus 199 ~~K~~~l~~l~~~l-gi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERL-GVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHH-TCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHc-CCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 48999999999985 444555666699999999999999999999 6778889999999999999999999874
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-12 Score=128.40 Aligned_cols=154 Identities=19% Similarity=0.252 Sum_probs=106.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhh-----------------HH---hh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEF-----------------NR---RV 190 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~-----------------~~---~~ 190 (591)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+. .+++.+|... .+ ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~----~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~ 94 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGID----SFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEA 94 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCC----CEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCC----EEEECCCCEEEECCEEEEEecCCHHHHHHHHHHH
Confidence 357888999999999999999999999999999999998862 1333343211 00 00
Q ss_pred hc---------ccc--------hhhHHH-----------------------------------HhhhcCcceEEEecCh-
Q psy8116 191 RD---------ANG--------DVQQHL-----------------------------------LDKVWPRLRVLARSSP- 217 (591)
Q Consensus 191 ~~---------~~~--------~~~~~~-----------------------------------l~~~~~~~~v~~r~sp- 217 (591)
.. ... ...... +....+.+.+ .+..|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 173 (258)
T 2pq0_A 95 HKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVRNYPEFRF-VRWHDV 173 (258)
T ss_dssp HHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHHHCTTEEE-EEEETT
T ss_pred HhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHHhCCCeEE-EEeCCc
Confidence 00 000 000000 0000011111 11122
Q ss_pred --------hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 218 --------TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 218 --------~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++|+||| ++.+.+|+.||+++.+++.+++.++|
T Consensus 174 ~~ei~~~~~~K~~~l~~l~~~l-gi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i 251 (258)
T 2pq0_A 174 STDVLPAGGSKAEGIRMMIEKL-GIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGL 251 (258)
T ss_dssp EEEEEESSCCHHHHHHHHHHHH-TCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHH
T ss_pred eEEEEECCCChHHHHHHHHHHh-CCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHH
Confidence 38999999999985 555556667799999999999999999999 67788899999999988999999988
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
++
T Consensus 252 ~~ 253 (258)
T 2pq0_A 252 KQ 253 (258)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=129.90 Aligned_cols=72 Identities=29% Similarity=0.348 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++|+||| ++.+.+|++||+++.+++.+++.++|++
T Consensus 193 ~~K~~~l~~l~~~l-gi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYY-RVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHT-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHc-CCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 48999999999984 555556667799999999999999999999 6778889999999999999999999874
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-12 Score=130.83 Aligned_cols=73 Identities=19% Similarity=0.197 Sum_probs=64.1
Q ss_pred hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 217 PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 217 p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+.+|+..++.+++++ +...+.++++||+.||++|++.|++||||| ++.+.+|++||+++.+++.+++.++|++
T Consensus 226 ~~~K~~al~~l~~~l-gi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 226 GLHKGWALQQLLKRW-NFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp TCSHHHHHHHHHHHT-TCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh-CcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 358999999999984 555566777799999999999999999999 6788889999999999999999999874
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-12 Score=119.43 Aligned_cols=136 Identities=20% Similarity=0.212 Sum_probs=107.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVL 212 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 212 (591)
+.+++.++|+.|+++|++++++||++...+..+++++|+.. + .++
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~----~--~~~----------------------------- 80 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL----F--FLG----------------------------- 80 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE----E--EES-----------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce----e--ecC-----------------------------
Confidence 34567799999999999999999999999999999999831 1 111
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHH----HH
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIV----KA 288 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~----~~ 288 (591)
...|...++.+++.+ ....+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..++. +.
T Consensus 81 ----~k~k~~~~~~~~~~~-~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~ 154 (180)
T 1k1e_A 81 ----KLEKETACFDLMKQA-GVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDM 154 (180)
T ss_dssp ----CSCHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHc-CCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHH
Confidence 246788888877763 445567888899999999999999999998 67788899999999887766666 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy8116 289 VMWGRNVYDSIAKFLQFQLTV 309 (591)
Q Consensus 289 i~~gR~~~~~i~~~~~f~l~~ 309 (591)
+...|..++++...+.|..+.
T Consensus 155 ~l~~~~~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 155 ILQAQGKSSVFDTAQGFLKSV 175 (180)
T ss_dssp HHHHTTCTHHHHCHHHHHHHG
T ss_pred HHHhcCchhhhhhccchhhhh
Confidence 345666677887777766554
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-12 Score=135.96 Aligned_cols=155 Identities=14% Similarity=0.147 Sum_probs=114.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++||+....+..+++++|+..--...+.+.+..+.. .+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg---------------------~~ 236 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTG---------------------QV 236 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEE---------------------EE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeee---------------------ee
Confidence 789999999999999999999999999999999999999942111111111100000 00
Q ss_pred E-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 212 L-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 212 ~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
. .-..+..|..+++.+++. ++...+.++++|||.||++|++.||+|++| ++.+..++.||.++..++++++.+++.
T Consensus 237 ~~~~~~~kpk~~~~~~~~~~-lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~ 313 (335)
T 3n28_A 237 LGEVVSAQTKADILLTLAQQ-YDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILS 313 (335)
T ss_dssp ESCCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHH
T ss_pred cccccChhhhHHHHHHHHHH-cCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHH
Confidence 0 012356788889888887 456667778889999999999999999999 577888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy8116 291 WGRNVYDSIAKFLQFQLTVN 310 (591)
Q Consensus 291 ~gR~~~~~i~~~~~f~l~~n 310 (591)
.......+++..+.+.+.+|
T Consensus 314 ~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 314 AALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHHHHTTCCCCC--------
T ss_pred hHHHHhhhhccccccccccc
Confidence 87777778887777777665
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.3e-11 Score=118.85 Aligned_cols=156 Identities=19% Similarity=0.241 Sum_probs=109.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH------------------Hhhh-
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN------------------RRVR- 191 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~------------------~~~~- 191 (591)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+.. ..++.+|..+. +...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~ 95 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRK 95 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHH
Confidence 3577889999999999999999999999999999999998732 34444542210 0000
Q ss_pred cc-----------------------cchhhHHHHhhhcCcceEE-----Eec--ChhhHHHHHHHHHHhhcCCCCcEEEE
Q psy8116 192 DA-----------------------NGDVQQHLLDKVWPRLRVL-----ARS--SPTDKYTLVKGIIDSKVSDSREVVAV 241 (591)
Q Consensus 192 ~~-----------------------~~~~~~~~l~~~~~~~~v~-----~r~--sp~~K~~~v~~l~~~~~~~~~~~va~ 241 (591)
.. ..+.....++.......+. ... ...+|...++.+++++ +...+.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~-~~~~~~~~~ 174 (231)
T 1wr8_A 96 RFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL-GIKPKEVAH 174 (231)
T ss_dssp HCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH-TSCGGGEEE
T ss_pred hCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHc-CCCHHHEEE
Confidence 00 0011111222221123332 111 2348999999999874 444556777
Q ss_pred ECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 242 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 242 iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+||+.||.+|++.|++|++|+ ++.+..++.||+++.+.+.+++.+++++
T Consensus 175 iGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 175 VGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp EECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 899999999999999999999 4667778899999998888899988874
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-12 Score=117.80 Aligned_cols=116 Identities=17% Similarity=0.180 Sum_probs=93.1
Q ss_pred EEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH--HcCCCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 122 TGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIAT--KCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 122 ~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~--~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
..++.+.+.|. .+|+.|+++|+++.++||+ ..+..+++ .+|+. + +.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-----~--~~----------------- 79 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-----T--EV----------------- 79 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----E--EC-----------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----E--EE-----------------
Confidence 45666777666 3899999999999999999 77888888 45551 1 11
Q ss_pred HHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccC
Q psy8116 200 HLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~ 279 (591)
.+.+|...++.++++ ++...+.++++||+.||++|++.|++++||+ ++.+.+++.||+++.+
T Consensus 80 ----------------g~~~K~~~l~~~~~~-~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 80 ----------------SVSDKLATVDEWRKE-MGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKC 141 (168)
T ss_dssp ----------------SCSCHHHHHHHHHHH-TTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSS
T ss_pred ----------------CCCChHHHHHHHHHH-cCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCC
Confidence 135689999998887 4666677788899999999999999999999 6788889999999998
Q ss_pred CChhHHHH
Q psy8116 280 DNFSSIVK 287 (591)
Q Consensus 280 ~~~~~i~~ 287 (591)
++-++++.
T Consensus 142 ~~~~G~~~ 149 (168)
T 3ewi_A 142 SGGRGAIR 149 (168)
T ss_dssp CTTTTHHH
T ss_pred CCCccHHH
Confidence 77777444
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.29 E-value=8.7e-12 Score=125.78 Aligned_cols=159 Identities=20% Similarity=0.266 Sum_probs=109.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH----------------------
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR---------------------- 188 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~---------------------- 188 (591)
..+.+++.++|++++++|++++++|||+...+..+.+++|+..+.+.+++.+|..+..
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 3588899999999999999999999999999999999999854333455555542210
Q ss_pred hhhc---------ccc---------hhh-------------------------------------HHHHhhh---c-Ccc
Q psy8116 189 RVRD---------ANG---------DVQ-------------------------------------QHLLDKV---W-PRL 209 (591)
Q Consensus 189 ~~~~---------~~~---------~~~-------------------------------------~~~l~~~---~-~~~ 209 (591)
.+.. ... ... .+..+.+ . ..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 180 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 180 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 0000 000 000 0000000 0 011
Q ss_pred eEE------EecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 210 RVL------ARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v~------~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.+. ....| .+|+..++.+++.+ +...+.++++||+.||++|++.|++|+||+ ++.+..|+.||+++.+++
T Consensus 181 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~-~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~ 258 (282)
T 1rkq_A 181 TVLKSAPYFLEILDKRVNKGTGVKSLADVL-GIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNL 258 (282)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTT
T ss_pred EEEEeCCceEEecCCCCCCHHHHHHHHHHh-CCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCC
Confidence 111 12222 38999999999884 445556777799999999999999999999 566777889999999888
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 259 ~dGV~~~l~~ 268 (282)
T 1rkq_A 259 EDGVAFAIEK 268 (282)
T ss_dssp TTHHHHHHHH
T ss_pred cchHHHHHHH
Confidence 8999988863
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-12 Score=122.10 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=89.9
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecC
Q psy8116 137 VPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSS 216 (591)
Q Consensus 137 v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~s 216 (591)
...+|+.|+++|+++.++||++...+..+++++|+.. ++..
T Consensus 57 d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-------------------------------------~~~~-- 97 (195)
T 3n07_A 57 DGYGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-------------------------------------IYQG-- 97 (195)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-------------------------------------EECS--
T ss_pred cHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-------------------------------------EeeC--
Confidence 3456999999999999999999999999999999831 1111
Q ss_pred hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHH
Q psy8116 217 PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 217 p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
..+|...++.+++. ++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++
T Consensus 98 ~k~k~~~~~~~~~~-~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 98 QDDKVQAYYDICQK-LAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp CSSHHHHHHHHHHH-HCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHH
T ss_pred CCCcHHHHHHHHHH-hCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHH
Confidence 15688888888887 4556667788899999999999999999999 67888899999999887766643
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.23 E-value=9.5e-11 Score=119.38 Aligned_cols=71 Identities=27% Similarity=0.320 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccccccc-CCChhHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT-DDNFSSIVKAVMW 291 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~-~~~~~~i~~~i~~ 291 (591)
+|+..++.+++.+ +...+.++++||+.||.+|++.|++|+||+ ++.+..|+.||+++. +++.+++.++|++
T Consensus 224 ~K~~~l~~l~~~~-~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHY-NISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHT-TCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHc-CCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 8999999999884 545556777799999999999999999999 567777889999998 8899999988874
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.1e-11 Score=112.96 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=91.1
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhh
Q psy8116 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTD 219 (591)
Q Consensus 140 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~ 219 (591)
+|+.|+++|+++.++||++...+..+++.+|+. + +.+ ..+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~--~~~---------------------------------~~~ 86 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----V--LHG---------------------------------IDR 86 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----E--EES---------------------------------CSC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----e--EeC---------------------------------CCC
Confidence 899999999999999999999999999999982 1 111 156
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
|...++.+++.+ +...+.++++||+.||++|++.|++|++|+ ++.+.+++.||+++.+++..++.+.+.
T Consensus 87 k~~~l~~~~~~~-~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 87 KDLALKQWCEEQ-GIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred hHHHHHHHHHHc-CCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 888888888874 555666777899999999999999999999 577888999999999888777665544
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-11 Score=115.45 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=95.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhh
Q psy8116 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTD 219 (591)
Q Consensus 140 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~ 219 (591)
+|+.|+++|+++.++||++...+..+++++|+.. ... .. ..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------~~~-------------------------------~~--kp 94 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------YYK-------------------------------GQ--VD 94 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------EEC-------------------------------SC--SS
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------cee-------------------------------CC--CC
Confidence 5999999999999999999999999999999842 111 01 34
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH----HHHHHHHHHHH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS----IVKAVMWGRNV 295 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~----i~~~i~~gR~~ 295 (591)
|..+++.+++. ++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+ +.+.+...|..
T Consensus 95 k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~ 172 (191)
T 3n1u_A 95 KRSAYQHLKKT-LGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNK 172 (191)
T ss_dssp CHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCc
Confidence 55666666665 4556677888899999999999999999999 677888999999999877555 44555566666
Q ss_pred HHHHHHHHH
Q psy8116 296 YDSIAKFLQ 304 (591)
Q Consensus 296 ~~~i~~~~~ 304 (591)
++.+.+.+.
T Consensus 173 ~~~~~~~~~ 181 (191)
T 3n1u_A 173 AELAITGYL 181 (191)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.19 E-value=8.1e-11 Score=117.81 Aligned_cols=72 Identities=24% Similarity=0.285 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||.+|++.|++|+||+ ++.+..|+.||+++.+++.+++.++|++
T Consensus 190 ~~K~~~~~~l~~~l-~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRW-DLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHh-CCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 49999999999884 545556777799999999999999999999 5667778999999998888999988874
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=5.8e-11 Score=109.30 Aligned_cols=104 Identities=22% Similarity=0.247 Sum_probs=87.2
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhh
Q psy8116 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTD 219 (591)
Q Consensus 140 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~ 219 (591)
+++.|+++|+++.++||++...+..+++++|+.. . +.. ...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~----~---------------------------------~~~--~kp 79 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY----L---------------------------------FQG--VVD 79 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----E---------------------------------ECS--CSC
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----e---------------------------------ecc--cCC
Confidence 8999999999999999999999999999999832 1 100 255
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~ 284 (591)
|..+++.+++. ++...+.++++||+.||++|++.|+++++++ ++.+..++.||+++.+++..+
T Consensus 80 k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 80 KLSAAEELCNE-LGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTT
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCc
Confidence 77888887777 4556677888899999999999999999998 678888999999999888555
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.16 E-value=5.8e-11 Score=114.50 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=87.7
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhh
Q psy8116 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTD 219 (591)
Q Consensus 140 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~ 219 (591)
+|+.|+++|+++.++||++...+..+++++|+.. ++... .+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-------------------------------------~f~~~--k~ 124 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-------------------------------------LYQGQ--SD 124 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------------------EECSC--SS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-------------------------------------hhccc--CC
Confidence 8999999999999999999999999999999931 11111 56
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~ 284 (591)
|..+++.+++. ++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+
T Consensus 125 K~~~l~~~~~~-lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 125 KLVAYHELLAT-LQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred hHHHHHHHHHH-cCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 88899888887 4566677888899999999999999999999 577778999999998775554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=114.92 Aligned_cols=153 Identities=14% Similarity=0.214 Sum_probs=101.6
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH----------hhhc------------
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR----------RVRD------------ 192 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~----------~~~~------------ 192 (591)
+.+.++|++++ +|++|+++|||+...+..+.+++|+..+ +.+++.||..+.. .+..
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~-~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIAD 99 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC-CEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHH
Confidence 45677787755 6899999999999999999999887432 3455555542210 0000
Q ss_pred -----------ccc----------hh---hHHHHhhhc----CcceEE------EecCh--hhHHHHHHHHHHhhcCCCC
Q psy8116 193 -----------ANG----------DV---QQHLLDKVW----PRLRVL------ARSSP--TDKYTLVKGIIDSKVSDSR 236 (591)
Q Consensus 193 -----------~~~----------~~---~~~~l~~~~----~~~~v~------~r~sp--~~K~~~v~~l~~~~~~~~~ 236 (591)
... +. ....+.+.. ..+.+. ....| .+|+..++.+++++ +...
T Consensus 100 ~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~-~~~~ 178 (244)
T 1s2o_A 100 GFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL-AMEP 178 (244)
T ss_dssp TCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT-TCCG
T ss_pred hccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHh-CCCH
Confidence 000 00 001111111 112221 11222 38999999999884 5455
Q ss_pred cEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhc-------ccccccCCChhHHHHHHHH
Q psy8116 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEA-------SDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 237 ~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~a-------ad~vl~~~~~~~i~~~i~~ 291 (591)
+.++++||+.||.+|++.|++|+||| ++.+..|+. ||+++.+++.+++.++|++
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred HHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 56777799999999999999999999 566666775 8899998889999988874
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-10 Score=115.58 Aligned_cols=71 Identities=27% Similarity=0.276 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+|+..++.+++.+ +...+.++++||+.||++|++.|++|++|| ++.+..|+.||+++.+++.+++.++|+
T Consensus 189 ~~K~~~~~~~~~~~-~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 189 VDKGKALRFLRERM-NWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CCHHHHHHHHHHHH-TCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CChHHHHHHHHHHc-CCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 38999999999874 444556677799999999999999999999 567777888999999888899998876
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=116.57 Aligned_cols=158 Identities=11% Similarity=0.041 Sum_probs=83.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH-Hh---------hhccc--ch---
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN-RR---------VRDAN--GD--- 196 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~-~~---------~~~~~--~~--- 196 (591)
.+.+++.++|++|+++|++++++|||....+..+.+++|+.. ..+++.||..+. .. +.... .+
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~--~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~ 103 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG--LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEIS 103 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT--SCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CeEEEeCCCeEEecCcccccCceEEEecCCCHHHHH
Confidence 356778999999999999999999999999999999998742 135555554321 00 00000 00
Q ss_pred -hh--------------------------------------------------HHHHh---hhcC--cceEE-----Eec
Q psy8116 197 -VQ--------------------------------------------------QHLLD---KVWP--RLRVL-----ARS 215 (591)
Q Consensus 197 -~~--------------------------------------------------~~~l~---~~~~--~~~v~-----~r~ 215 (591)
.. .+.++ +... .+.+. ...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI 183 (275)
T 1xvi_A 104 LVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHV 183 (275)
T ss_dssp HHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEE
T ss_pred HHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEE
Confidence 00 00000 0000 01111 011
Q ss_pred Ch--hhHHHHHHHHHHhhcCCCCcE--EEEECCCCCCHHhhhcCCeeeeeCCCcc--HHHHhc--cc-ccccCCChhHHH
Q psy8116 216 SP--TDKYTLVKGIIDSKVSDSREV--VAVTGDGTNDGPALKKADVGFAMGIAGT--DVAKEA--SD-IILTDDNFSSIV 286 (591)
Q Consensus 216 sp--~~K~~~v~~l~~~~~~~~~~~--va~iGDg~ND~~mLk~A~vGiamg~~~~--~~ak~a--ad-~vl~~~~~~~i~ 286 (591)
.| .+|+..++.+++.+.....+. ++++||+.||.+|++.|++||||+++.. +..++. || +++.+++.+++.
T Consensus 184 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa 263 (275)
T 1xvi_A 184 LDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWR 263 (275)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC--------------------------
T ss_pred ecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHH
Confidence 12 289999999998743023334 7777999999999999999999995431 444543 78 888888889999
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
++|++
T Consensus 264 ~~l~~ 268 (275)
T 1xvi_A 264 EGLDH 268 (275)
T ss_dssp -----
T ss_pred HHHHH
Confidence 88874
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.09 E-value=5.9e-11 Score=116.73 Aligned_cols=141 Identities=13% Similarity=0.162 Sum_probs=94.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH-------------Hh-h-------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN-------------RR-V------- 190 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~-------------~~-~------- 190 (591)
.+.+++.++|++|+++| +|+++|||+...+..+...+ + .+++.+|..+. .. +
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~-----~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~ 95 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-I-----NMICYHGACSKINGQIVYNNGSDRFLGVFDRIYED 95 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-C-----EEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-h-----heEEECCEEEeeCCeeeecccccccchhhHHHHHH
Confidence 57889999999999999 99999999999998887654 1 23333332210 00 0
Q ss_pred -----hcccc----------------------hhhHH---HHhhhcCcceEE-----EecCh--hhHHHHHHHHHHhhcC
Q psy8116 191 -----RDANG----------------------DVQQH---LLDKVWPRLRVL-----ARSSP--TDKYTLVKGIIDSKVS 233 (591)
Q Consensus 191 -----~~~~~----------------------~~~~~---~l~~~~~~~~v~-----~r~sp--~~K~~~v~~l~~~~~~ 233 (591)
....+ +.... .+... ..+.+. ....| .+|+..++.+++++
T Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~-- 172 (239)
T 1u02_A 96 TRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGER-- 172 (239)
T ss_dssp HTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTS--
T ss_pred HHHHHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhC--
Confidence 00000 00000 11111 112221 12223 39999999998763
Q ss_pred CCCcEEEEECCCCCCHHhhhcC--CeeeeeCCCccHHHHhcccccccC-CChhHHHHHHHH
Q psy8116 234 DSREVVAVTGDGTNDGPALKKA--DVGFAMGIAGTDVAKEASDIILTD-DNFSSIVKAVMW 291 (591)
Q Consensus 234 ~~~~~va~iGDg~ND~~mLk~A--~vGiamg~~~~~~ak~aad~vl~~-~~~~~i~~~i~~ 291 (591)
+ |+++||+.||.+||+.| ++|||||++ +++||+++.+ ++.+++.++|++
T Consensus 173 --g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 173 --P--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp --C--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred --C--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCCCCCHHHHHHHHHH
Confidence 3 77779999999999999 999999954 6889999887 678888888764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-09 Score=110.54 Aligned_cols=71 Identities=23% Similarity=0.283 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+|+..++.+++. ++...+.++++||+.||++|++.|++|+||+ ++.+..|+.||+++.+++.+++.++|++
T Consensus 216 ~K~~~~~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQ-LNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHH-TTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 899999999988 4555566777799999999999999999999 5677778999999998889999988864
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.3e-10 Score=109.49 Aligned_cols=138 Identities=15% Similarity=0.108 Sum_probs=101.7
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+..+..+...+ ...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---------------------~~~ 132 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDAL---------------------NGL 132 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---------------------EEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEE---------------------Eee
Confidence 46899999999999999999999999999999999999998421111111111000 000
Q ss_pred EEE-ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 211 VLA-RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 211 v~~-r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
+.. -.....|..+++.+++.+ +...+.++++||+.||++|++.||++++| ++.+..++.||+++.++++.++..++
T Consensus 133 ~~~~~~~~k~k~~~~~~~~~~~-g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 133 VTGHMMFSHSKGEMLLVLQRLL-NISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp EEESCCSTTHHHHHHHHHHHHH-TCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-
T ss_pred eccCCCCCCChHHHHHHHHHHc-CCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHh
Confidence 001 123567899999988874 44555667779999999999999999999 46777799999999999999999888
Q ss_pred HHH
Q psy8116 290 MWG 292 (591)
Q Consensus 290 ~~g 292 (591)
.|-
T Consensus 210 ~~~ 212 (217)
T 3m1y_A 210 EGH 212 (217)
T ss_dssp ---
T ss_pred ccc
Confidence 753
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-10 Score=107.58 Aligned_cols=134 Identities=21% Similarity=0.226 Sum_probs=95.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
+.++.|++.++++.+++.|+++.++||+....+..+.+.+|+.. . ..++..... + .. ..
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~------~---------~~-~~ 132 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY----A-FANRLIVKD------G---------KL-TG 132 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE----E-EEEEEEEET------T---------EE-EE
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe----E-EEeeeEEEC------C---------EE-cC
Confidence 34678999999999999999999999999998888888888731 1 111100000 0 00 00
Q ss_pred eEEEe-cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 210 RVLAR-SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 210 ~v~~r-~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.+... ..+.+|...+..+++++ +...+.++++||+.||++|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 133 ~~~~~~~~~~~K~~~l~~~~~~l-gi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 133 DVEGEVLKENAKGEILEKIAKIE-GINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp EEECSSCSTTHHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CcccCccCCccHHHHHHHHHHHc-CCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 01001 22468899999888874 555566777799999999999999999998 45566889999998767777654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.9e-10 Score=110.65 Aligned_cols=69 Identities=19% Similarity=0.162 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHhhcCCCC--cEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSR--EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~--~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.++++ ++... +.++++||+.||.+|++.|++|+||+++.. . ++++++.+++.+++.+++++
T Consensus 175 ~~K~~~l~~l~~~-~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRAL-WPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHT-CSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-hCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCCCCchHHHHHHHH
Confidence 6999999999987 45544 667777999999999999999999996554 3 78899988888998888763
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.98 E-value=5.6e-10 Score=110.88 Aligned_cols=72 Identities=29% Similarity=0.305 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++|++|+ ++.+..+..||+++.+.+.+++.+++++
T Consensus 186 ~~K~~~~~~~~~~~-~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 186 DTKQKGIDEIIRHF-GIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp CSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHc-CCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 38999999999884 555556677799999999999999999999 5667778999999998788889988763
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3.9e-10 Score=111.44 Aligned_cols=61 Identities=26% Similarity=0.212 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccccccc
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~ 278 (591)
.+|+..++.+++++.....+.|+++||+.||++||+.|++|+|||++..+..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEec
Confidence 5899999999987432145777888999999999999999999995443666788998876
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=115.28 Aligned_cols=144 Identities=18% Similarity=0.232 Sum_probs=108.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+...-...+.+.+..+. + .+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~t-------g--------------~~ 314 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLT-------G--------------RV 314 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEE-------E--------------EE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEE-------e--------------eE
Confidence 78999999999999999999999999999999999999993210000111110000 0 00
Q ss_pred E-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 212 L-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 212 ~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
. .-..++.|..+++.+++.+ +...+.++++||+.||++|++.||+|+++ ++.+..++.||+++..++++++..++.
T Consensus 315 ~~~v~~~kpk~~~~~~~~~~~-gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~ 391 (415)
T 3p96_A 315 VGPIIDRAGKATALREFAQRA-GVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLG 391 (415)
T ss_dssp CSSCCCHHHHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTT
T ss_pred ccCCCCCcchHHHHHHHHHHc-CcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhC
Confidence 0 0123678999999988874 55556677789999999999999999999 366777899999999999999999887
Q ss_pred HHHHHHHHH
Q psy8116 291 WGRNVYDSI 299 (591)
Q Consensus 291 ~gR~~~~~i 299 (591)
.+|.-+...
T Consensus 392 ~~~~~~~~~ 400 (415)
T 3p96_A 392 VTRGEIEAA 400 (415)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 776655443
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.7e-09 Score=96.89 Aligned_cols=114 Identities=17% Similarity=0.205 Sum_probs=90.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVL 212 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 212 (591)
+.+++.++|+.|+++|+++.++||++...+..+.+++|+.. + +++
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~----~--~~~----------------------------- 81 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE----I--YTG----------------------------- 81 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE----E--EEC-----------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh----h--ccC-----------------------------
Confidence 35678899999999999999999999999999999999831 1 111
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
+..|...++.+++. ++...+.++++||+.||++|.+.||++++++ ++.+..++.||+++.+.+..+++.
T Consensus 82 ----~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~ 150 (162)
T 2p9j_A 82 ----SYKKLEIYEKIKEK-YSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALR 150 (162)
T ss_dssp ----C--CHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHH
T ss_pred ----CCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHH
Confidence 23455666666665 4555667888899999999999999999998 567777889999999888777773
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.3e-09 Score=101.14 Aligned_cols=111 Identities=18% Similarity=0.227 Sum_probs=87.9
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChh
Q psy8116 139 DAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPT 218 (591)
Q Consensus 139 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~ 218 (591)
.+|+.|+++|+++.++||++...+..+++++|+.. + + . ...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~----~--~-------------------------------~--~~k 100 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH----L--Y-------------------------------Q--GQS 100 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----E--E-------------------------------C--SCS
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----e--e-------------------------------c--CCC
Confidence 48999999999999999999999999999999831 1 0 0 124
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHH-HHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIV-KAVM 290 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~-~~i~ 290 (591)
.|..+++.+++.+ +...+.++++||+.||++|++.||++++++ ++.+.+++.||+++.+.+..+++ +++.
T Consensus 101 pk~~~~~~~~~~~-g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 101 NKLIAFSDLLEKL-AIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp CSHHHHHHHHHHH-TCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHc-CCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 5677777777763 444567888899999999999999999998 45666688899999887666666 4443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-09 Score=110.38 Aligned_cols=135 Identities=13% Similarity=0.191 Sum_probs=100.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+++++|+..--+..+..++..+.. .+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg---------------------~i 237 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD---------------------NI 237 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE---------------------EE
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee---------------------eE
Confidence 589999999999999999999999999999999999999942111111111110000 00
Q ss_pred EE-ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 212 LA-RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 212 ~~-r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.. -..++.|..+++.+++.+ +...+.++++||+.||++|++.||+|++++ +.+..++.||.++..+++.++.++++
T Consensus 238 ~~~~~~~kpkp~~~~~~~~~l-gv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 238 TLPIMNAANKKQTLVDLAARL-NIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CSSCCCHHHHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred ecccCCCCCCHHHHHHHHHHc-CCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 00 123567888888888874 555566778899999999999999999994 56667888999998889988877654
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.3e-09 Score=103.85 Aligned_cols=131 Identities=22% Similarity=0.307 Sum_probs=98.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
..++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 102 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~----------------------- 156 (237)
T 4ex6_A 102 PRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--IAGDDSV----------------------- 156 (237)
T ss_dssp GGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE--EECTTTS-----------------------
T ss_pred CCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee--EEeCCCC-----------------------
Confidence 345789999999999999999999999999999999999998432111 1111110
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHHHHh-cccccccCCChhHH
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTDVAKE-ASDIILTDDNFSSI 285 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~ak~-aad~vl~~~~~~~i 285 (591)
.....|..+++.++++ ++...+.++++||+.||+.|++.||+ +|+||++..+..++ .||+++. ++..+
T Consensus 157 -----~~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el 228 (237)
T 4ex6_A 157 -----ERGKPHPDMALHVARG-LGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAA 228 (237)
T ss_dssp -----SSCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHH
T ss_pred -----CCCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHH
Confidence 0123456677777776 45566667777999999999999999 99999655455555 8999987 89999
Q ss_pred HHHHHHHH
Q psy8116 286 VKAVMWGR 293 (591)
Q Consensus 286 ~~~i~~gR 293 (591)
.++++.|+
T Consensus 229 ~~~l~~~~ 236 (237)
T 4ex6_A 229 VTAVLDGH 236 (237)
T ss_dssp HHHHHHC-
T ss_pred HHHHHccC
Confidence 88887654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-08 Score=100.89 Aligned_cols=72 Identities=21% Similarity=0.252 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|...++.+++.+ +...+.++++||+.||++|++.|++|++|+ ++.+..++.||+++.+++.+++.+++++
T Consensus 210 ~~k~~~~~~~~~~~-~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 210 TGKNEIVTFMLEKY-NLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLKK 281 (289)
T ss_dssp CSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHc-CCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHHH
Confidence 48999999999874 555566777799999999999999999999 5777778999999998888899888873
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.80 E-value=2.8e-09 Score=100.13 Aligned_cols=119 Identities=20% Similarity=0.304 Sum_probs=88.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.+...+..+ +.+|+..- ...+...+.. ..
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~------------------------~~ 132 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGK------------------------FQ 132 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTE------------------------EE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCc------------------------eE
Confidence 7899999999999999999999999988888888 88887321 1111111100 00
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
-....|..|...++.+ ..+.++++||+.||++|++.||+|++|+++.. .||+++. +++.+.++++
T Consensus 133 ~~~~~~~~k~~~l~~l-------~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 133 GIRLRFRDKGEFLKRF-------RDGFILAMGDGYADAKMFERADMGIAVGREIP-----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EEECCSSCHHHHHGGG-------TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT-----TCSEEES--SHHHHHHHHH
T ss_pred CCcCCccCHHHHHHhc-------CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc-----cccEEEc--cHHHHHHHHH
Confidence 0345677899888873 45566777999999999999999999995443 8899987 6777776664
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-08 Score=98.25 Aligned_cols=128 Identities=12% Similarity=0.137 Sum_probs=97.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+..+ .+...
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~--~~~~~------------------------ 138 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIV--GSSLD------------------------ 138 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE--EECTT------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeee--ccCCC------------------------
Confidence 3678999999999999999999999999999999999999843111111 11000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHHH-HhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTDVA-KEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~a-k~aad~vl~~~~~~~i~ 286 (591)
.....|..+++.+++.+ +...+.++++||+.||+.|++.||+ ++++|++..+.. +..||+++. +++.+.
T Consensus 139 ----~~~kp~~~~~~~~~~~l-gi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~ 211 (226)
T 3mc1_A 139 ----GKLSTKEDVIRYAMESL-NIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELH 211 (226)
T ss_dssp ----SSSCSHHHHHHHHHHHH-TCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHh-CcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHH
Confidence 11345788888888874 5555577777999999999999998 888886554443 688999987 888888
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
+++..
T Consensus 212 ~~~~~ 216 (226)
T 3mc1_A 212 KKILE 216 (226)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 88763
|
| >2kne_B CAM, ATPase, Ca++ transporting, plasma membrane 4; protein/peptide, calcium pump, calmodulin, acetylation, calcium, isopeptide bond, methylation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.4e-10 Score=69.93 Aligned_cols=24 Identities=54% Similarity=0.855 Sum_probs=22.3
Q ss_pred CCcchhhhhhhccccccceeeeeC
Q psy8116 548 RAGQILWIRGLTRLQTQVSQPVVD 571 (591)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~ 571 (591)
|+||+||+||++|||||+|||+.+
T Consensus 2 r~gqiLW~RgL~riqtQ~rvi~af 25 (28)
T 2kne_B 2 RRGQILWFRGLNRIQTQIKVVKAF 25 (28)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeccHHHHHHHHHHHHhh
Confidence 789999999999999999999864
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-08 Score=103.67 Aligned_cols=151 Identities=16% Similarity=0.222 Sum_probs=94.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEe--cch------hhHHhhhcc-cchhh---H
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLIL--EGK------EFNRRVRDA-NGDVQ---Q 199 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l--~g~------~~~~~~~~~-~~~~~---~ 199 (591)
++++++.++++.|++ |+.+.++||+....+..+...+++. +.+..- ... ++...+... ..... .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 678999999999999 9999999999877777777777773 111110 000 000000000 00000 0
Q ss_pred HHHhhhc-----Cc-ceEE---EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC----CeeeeeCCCcc
Q psy8116 200 HLLDKVW-----PR-LRVL---ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA----DVGFAMGIAGT 266 (591)
Q Consensus 200 ~~l~~~~-----~~-~~v~---~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A----~vGiamg~~~~ 266 (591)
+.++.+. .. ..+. .-..+.+|+..++.+... ...++|+++|||.||++|++.| |+|||| ++.
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~---~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~ 253 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES---KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGN 253 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH---HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCC
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh---hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCC
Confidence 0000000 00 0000 112356899998864321 1113477779999999999999 999999 467
Q ss_pred HHHHhcccccccCCChhHHHHHHHH
Q psy8116 267 DVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 267 ~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+.+|++||+++.+++.+++.++|++
T Consensus 254 ~~lk~~Ad~v~~~~~~dGV~~~l~~ 278 (332)
T 1y8a_A 254 EYALKHADVVIISPTAMSEAKVIEL 278 (332)
T ss_dssp HHHHTTCSEEEECSSTHHHHHHHHH
T ss_pred HHHHhhCcEEecCCCCCHHHHHHHH
Confidence 8889999999998899888887653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=5.4e-09 Score=99.23 Aligned_cols=127 Identities=12% Similarity=0.067 Sum_probs=95.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-ceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD-DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~-~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+ .. ++.+ +.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~-i~~~-~~------------------------ 123 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD-VLGR-DE------------------------ 123 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-EECT-TT------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-EEeC-CC------------------------
Confidence 467899999999999999999999999999999999999842110 00 1110 00
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||+ +|+|++ +.+..++.||+++. ++..+.+.+
T Consensus 124 ----~~~kp~~~~~~~~~~~-~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~ad~v~~--~~~el~~~~ 195 (205)
T 3m9l_A 124 ----APPKPHPGGLLKLAEA-WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNL-PDNPWPELTDWHAR--DCAQLRDLL 195 (205)
T ss_dssp ----SCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEECSS-SSCSCGGGCSEECS--SHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeC-CCCcccccCCEEeC--CHHHHHHHH
Confidence 0122345566677766 45556677778999999999999999 999995 44555788999997 889998888
Q ss_pred HHH
Q psy8116 290 MWG 292 (591)
Q Consensus 290 ~~g 292 (591)
...
T Consensus 196 ~~~ 198 (205)
T 3m9l_A 196 SAE 198 (205)
T ss_dssp HHT
T ss_pred Hhc
Confidence 753
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=5.4e-08 Score=92.33 Aligned_cols=127 Identities=12% Similarity=0.205 Sum_probs=87.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE----EecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL----ILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i----~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
.+.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. ..+. ...+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---------------------- 137 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPR--ENIFAVETIWNSDG---------------------- 137 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCG--GGEEEEEEEECTTS----------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCc--ccEEEeeeeecCCC----------------------
Confidence 488999999999999999999999999999999999999842 1111 111100
Q ss_pred cceEE--EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhc----CCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 208 RLRVL--ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKK----ADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 208 ~~~v~--~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~----A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
...-+ ...+|..|...+. +. ++...+.++++||+.||++|++. +.+|++++ ++.+..+..||+++. +
T Consensus 138 ~~~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~ 210 (219)
T 3kd3_A 138 SFKELDNSNGACDSKLSAFD---KA-KGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--N 210 (219)
T ss_dssp BEEEEECTTSTTTCHHHHHH---HH-GGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--S
T ss_pred ceeccCCCCCCcccHHHHHH---HH-hCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--C
Confidence 00001 1223445544443 33 35556778888999999999976 45566666 466777889999987 7
Q ss_pred hhHHHHHH
Q psy8116 282 FSSIVKAV 289 (591)
Q Consensus 282 ~~~i~~~i 289 (591)
++.+.+++
T Consensus 211 ~~el~~~l 218 (219)
T 3kd3_A 211 VAELASLI 218 (219)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 77776654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.64 E-value=3e-08 Score=94.61 Aligned_cols=124 Identities=13% Similarity=0.166 Sum_probs=87.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.+++.+.++.+++.|+++.++|+.....+..+.+.+|+...-+..+ .+...
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~------------------------ 146 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALA--SAEKL------------------------ 146 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--ECTTS------------------------
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEE--ecccc------------------------
Confidence 3567999999999999999999999999888888888888742111111 11000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee----CCCccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM----GIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam----g~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
.....|..+++.+++++ +...+.++++||+.||++|++.||++++| ++ +.+..+..||+++. ++..+.
T Consensus 147 ----~~~kp~~~~~~~~~~~~-~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~-~~~~~~~~a~~v~~--~~~el~ 218 (226)
T 1te2_A 147 ----PYSKPHPQVYLDCAAKL-GVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEA-QNDPRFVLANVKLS--SLTELT 218 (226)
T ss_dssp ----SCCTTSTHHHHHHHHHH-TSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTT-TTCGGGGGSSEECS--CGGGCC
T ss_pred ----CCCCCChHHHHHHHHHc-CCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCC-cccccccccCeEEC--CHHHHh
Confidence 01122356677777764 55556677779999999999999999998 53 33345788999987 555554
Q ss_pred HH
Q psy8116 287 KA 288 (591)
Q Consensus 287 ~~ 288 (591)
..
T Consensus 219 ~~ 220 (226)
T 1te2_A 219 AK 220 (226)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.2e-08 Score=95.14 Aligned_cols=128 Identities=13% Similarity=0.070 Sum_probs=95.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 143 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--IVTRDDV------------------------ 143 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC--EECGGGS------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe--eeccccC------------------------
Confidence 45789999999999999999999999999999999999998532111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHHHHhc-ccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTDVAKEA-SDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~ak~a-ad~vl~~~~~~~i~ 286 (591)
.....|..+++.+++. ++...+.++++||+.||+.|++.||+ ++++|.+..+..++. ||+++. ++..+.
T Consensus 144 ----~~~kp~~~~~~~~~~~-l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~ 216 (233)
T 3s6j_A 144 ----SYGKPDPDLFLAAAKK-IGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLL 216 (233)
T ss_dssp ----SCCTTSTHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHH
T ss_pred ----CCCCCChHHHHHHHHH-hCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHH
Confidence 0123456677777776 45556677788999999999999998 777775555555554 999987 888888
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
+.++.
T Consensus 217 ~~l~~ 221 (233)
T 3s6j_A 217 NHLDE 221 (233)
T ss_dssp HTGGG
T ss_pred HHHHH
Confidence 88764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3.8e-08 Score=97.80 Aligned_cols=60 Identities=20% Similarity=0.307 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECC----CCCCHHhhhcCC-eeeeeCCCccHHHHhcccccccCCCh
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGD----GTNDGPALKKAD-VGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGD----g~ND~~mLk~A~-vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
.+|+..++.+ ++...+.|+++|| +.||.+||+.|+ +|+||+ |+.+.+|+.||+++.+++.
T Consensus 196 vsKg~al~~l----~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSL----DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHH----TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHH----HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcC
Confidence 3899999998 3445667777799 999999999999 599998 7888889999999876543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.58 E-value=6.8e-08 Score=93.78 Aligned_cols=126 Identities=15% Similarity=0.155 Sum_probs=93.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+..+. +...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~--~~~~------------------------ 162 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAG--SNLD------------------------ 162 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE--ECTT------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEe--cccc------------------------
Confidence 35789999999999999999999999999999999999998432111111 1000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCC-CcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHH-HHhcccccccCCChhHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDS-REVVAVTGDGTNDGPALKKADV---GFAMGIAGTDV-AKEASDIILTDDNFSSI 285 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~-~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~-ak~aad~vl~~~~~~~i 285 (591)
.....|..+++.+++.+ +.. .+.++++||+.||+.|.+.||+ ++++|++..+. .+..||+++. +++.+
T Consensus 163 ----~~~kp~~~~~~~~~~~~-g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el 235 (240)
T 3sd7_A 163 ----GTRVNKNEVIQYVLDLC-NVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESI 235 (240)
T ss_dssp ----SCCCCHHHHHHHHHHHH-TCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTH
T ss_pred ----CCCCCCHHHHHHHHHHc-CCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHH
Confidence 11345777888888874 555 6667777999999999999998 77777544443 3578999988 67777
Q ss_pred HHHH
Q psy8116 286 VKAV 289 (591)
Q Consensus 286 ~~~i 289 (591)
.++|
T Consensus 236 ~~~l 239 (240)
T 3sd7_A 236 KDIL 239 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.9e-07 Score=85.58 Aligned_cols=130 Identities=13% Similarity=0.088 Sum_probs=90.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+...-+..+.. +.+. ...
T Consensus 68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~-~~~~---------------------~~~ 124 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEI-DDSD---------------------RVV 124 (206)
T ss_dssp CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEE-CTTS---------------------CEE
T ss_pred cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEE-cCCc---------------------eEE
Confidence 36789999999999999 999999999999999999999984210001111 1110 000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
..-...|+.|..+++.+. ...+.++++||+.||++|.+.||+++++. ...+..+.+++++ ..+++..+.+++.
T Consensus 125 ~~~~p~p~~~~~~l~~l~-----~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~l~ 197 (206)
T 1rku_A 125 GYQLRQKDPKRQSVIAFK-----SLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFP-AVHTYEDLKREFL 197 (206)
T ss_dssp EEECCSSSHHHHHHHHHH-----HTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSC-EECSHHHHHHHHH
T ss_pred eeecCCCchHHHHHHHHH-----hcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhc-cccchHHHHHHHH
Confidence 011256788998888753 23567888899999999999999999985 4444433344443 2347888877664
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.54 E-value=6.9e-08 Score=94.86 Aligned_cols=54 Identities=20% Similarity=0.328 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECC----CCCCHHhhhcCCe-eeeeCCCccHHHHhcccccc
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGD----GTNDGPALKKADV-GFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGD----g~ND~~mLk~A~v-Giamg~~~~~~ak~aad~vl 277 (591)
+|+..++.+ ++...+.|+++|| |.||.+||+.|+. |+||| ++.+.+|+.||+|.
T Consensus 188 ~Kg~al~~l----~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHV----ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGT----TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred chHHHHHHH----hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 899999987 3445566777799 9999999999998 99999 68888899999873
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.54 E-value=4.3e-08 Score=93.40 Aligned_cols=123 Identities=10% Similarity=0.038 Sum_probs=84.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.+++.|+++.++|+. ..+..+.+.+|+...-+ .++.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~--~~~~~~~~------------------------- 141 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD--AIADPAEV------------------------- 141 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS--EECCTTTS-------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc--eEeccccC-------------------------
Confidence 46799999999999999999999998 45566777788732111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
..+..|..+++.++++ ++...+.++++||+.||++|++.||++++|.+ +.+..+ .||+++.+.+.-++..++
T Consensus 142 ---~~~Kp~~~~~~~~~~~-lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~-~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 142 ---AASKPAPDIFIAAAHA-VGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp ---SSCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred ---CCCCCChHHHHHHHHH-cCCChhHeEEEeCCHHHHHHHHHCCCEEEEEC-CHHHhc-cccchhcCHHhCCHHHHH
Confidence 0112233456666666 45556667777999999999999999999994 555556 899998755444444443
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.7e-07 Score=89.08 Aligned_cols=114 Identities=18% Similarity=0.126 Sum_probs=80.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+...+..+. -.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------------g~~ 150 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYT---------------------GRI 150 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEE---------------------EEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEe---------------------eee
Confidence 57999999999999999999999999999999999999983100000111000000 000
Q ss_pred E-EecChhhHHHHHHHHHHhhcC---CCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH
Q psy8116 212 L-ARSSPTDKYTLVKGIIDSKVS---DSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV 268 (591)
Q Consensus 212 ~-~r~sp~~K~~~v~~l~~~~~~---~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ 268 (591)
. ....+..|...++.+++. ++ ...+.++++||+.||++|++.||+++++. .....
T Consensus 151 ~~~~~~~~~K~~~~~~~~~~-~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l 209 (232)
T 3fvv_A 151 EGTPSFREGKVVRVNQWLAG-MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGL 209 (232)
T ss_dssp ESSCSSTHHHHHHHHHHHHH-TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHH
T ss_pred cCCCCcchHHHHHHHHHHHH-cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHH
Confidence 0 112346788888887776 34 44567888899999999999999999986 33333
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.5e-07 Score=92.69 Aligned_cols=51 Identities=25% Similarity=0.287 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECC----CCCCHHhhhcCC-eeeeeCCCccHHHHhcccc
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGD----GTNDGPALKKAD-VGFAMGIAGTDVAKEASDI 275 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGD----g~ND~~mLk~A~-vGiamg~~~~~~ak~aad~ 275 (591)
+|+..++.|++ ..+.++++|| |.||.+||+.|+ +|++|+ ++.+.+|..+++
T Consensus 187 ~Kg~al~~L~~-----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVED-----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTT-----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHHc-----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 89999988643 5567777799 699999999996 899999 677777765544
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.50 E-value=6.2e-08 Score=92.33 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=84.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+.+++.+.++.+++.|+++.++|+..........+.+|+...-+. ++.+.+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------------- 141 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDI--IIGGEDV------------------------- 141 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSE--EECGGGC-------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheee--eeehhhc-------------------------
Confidence 3568999999999999999999999999888888888887432111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee----CCCccHHHHhc-ccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM----GIAGTDVAKEA-SDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam----g~~~~~~ak~a-ad~vl~~~~~~~i~ 286 (591)
..+..|..+++.++++ ++...+.++++||+.||++|++.||++++| ++ ..+..+.. ||+++. +++.+.
T Consensus 142 ---~~~k~~~~~~~~~~~~-~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~-~~~~l~~~~ad~v~~--~~~el~ 214 (225)
T 3d6j_A 142 ---THHKPDPEGLLLAIDR-LKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMT-TAQEFQAYPYDRIIS--TLGQLI 214 (225)
T ss_dssp ---SSCTTSTHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSC-CTTGGGGSCCSEEES--SGGGGC
T ss_pred ---CCCCCChHHHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCC-ChHHHhhcCCCEEEC--CHHHHH
Confidence 0112344556666666 455556667779999999999999999887 43 23333444 899887 566666
Q ss_pred HHHH
Q psy8116 287 KAVM 290 (591)
Q Consensus 287 ~~i~ 290 (591)
+.+.
T Consensus 215 ~~l~ 218 (225)
T 3d6j_A 215 SVPE 218 (225)
T ss_dssp ----
T ss_pred Hhhh
Confidence 6554
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-07 Score=92.62 Aligned_cols=128 Identities=13% Similarity=0.130 Sum_probs=89.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-... +..+...
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~------------------------ 156 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-LVTPDDV------------------------ 156 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-CBCGGGS------------------------
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh-eecCCcc------------------------
Confidence 357799999999999999999999999988888888888763211010 1111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCC-cEEEEECCCCCCHHhhhcCC---eeeeeCCCc---------------------
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSR-EVVAVTGDGTNDGPALKKAD---VGFAMGIAG--------------------- 265 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~-~~va~iGDg~ND~~mLk~A~---vGiamg~~~--------------------- 265 (591)
.....|...++.+++++ +... +.++++||+.||++|++.|| +++++|++.
T Consensus 157 ----~~~kp~~~~~~~~~~~l-gi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T 1swv_A 157 ----PAGRPYPWMCYKNAMEL-GVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIE 231 (267)
T ss_dssp ----SCCTTSSHHHHHHHHHH-TCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHh-CCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhh
Confidence 01223556677777764 4444 66777799999999999999 678888541
Q ss_pred --cHHHHhc-ccccccCCChhHHHHHHH
Q psy8116 266 --TDVAKEA-SDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 266 --~~~ak~a-ad~vl~~~~~~~i~~~i~ 290 (591)
.+..+++ ||+++. ++..+.+++.
T Consensus 232 ~~~~~~~~~~ad~v~~--~~~el~~~l~ 257 (267)
T 1swv_A 232 VVRNRFVENGAHFTIE--TMQELESVME 257 (267)
T ss_dssp HHHHHHHHTTCSEEES--SGGGHHHHHH
T ss_pred hHHHHHHhcCCceecc--CHHHHHHHHH
Confidence 2333444 999986 7888877765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-07 Score=90.76 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=79.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVL 212 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 212 (591)
+.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-+. ++.+.+..
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~--i~~~~~~~------------------------- 143 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA--IVDPTTLA------------------------- 143 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE--ECCC-----------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE--EeeHhhCC-------------------------
Confidence 789999999999999999999999744 7778888888432111 11111100
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
....|..+++.+++. ++...+.++++||+.||+.|.+.||++++|.+. .+..+ .||+++.+.+.-.+..+++
T Consensus 144 ---~~Kp~~~~~~~~~~~-lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~-~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 144 ---KGKPDPDIFLTAAAM-LDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQ-GQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp --------CCHHHHHHHH-HTSCGGGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCCHHHHHH
T ss_pred ---CCCCChHHHHHHHHH-cCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECC-ccccc-cCCEEeCChHhCCHHHHHH
Confidence 112234456666666 355556677779999999999999999999954 44445 8999988544444444444
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.6e-07 Score=87.69 Aligned_cols=126 Identities=12% Similarity=0.096 Sum_probs=87.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN---INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~---~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
.+.|++.+.++.|++.|+++.++|+.. ...+....+.+|+...-+. ++.+.+..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~--------------------- 155 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TFFADEVL--------------------- 155 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EEEHHHHT---------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--heeccccC---------------------
Confidence 358999999999999999999999999 8888888888887432111 11111100
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeeeCC--CccHHHHhcccccccCCChhHH
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAMGI--AGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiamg~--~~~~~ak~aad~vl~~~~~~~i 285 (591)
....|..+++.++++ ++...+.++++||+. ||+.|++.||++++|-+ +..+..+..+|+++. ++..+
T Consensus 156 -------~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el 225 (235)
T 2om6_A 156 -------SYKPRKEMFEKVLNS-FEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANL 225 (235)
T ss_dssp -------CCTTCHHHHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGH
T ss_pred -------CCCCCHHHHHHHHHH-cCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHH
Confidence 011234566666666 455566777789999 99999999999999822 222223445788776 67777
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+++.
T Consensus 226 ~~~l~ 230 (235)
T 2om6_A 226 KDVIE 230 (235)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.46 E-value=3.7e-07 Score=87.75 Aligned_cols=127 Identities=12% Similarity=0.068 Sum_probs=86.0
Q ss_pred CCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+...-+. ...+.+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 146 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADDA------------------------ 146 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTTC------------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ceecCCC------------------------
Confidence 4679999999999999 999999999999999888888888432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcC--CCCcEEEEECCCCCCHHhhhcCC---eeeeeCCCccHHHHh-cccccccCCChhH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVS--DSREVVAVTGDGTNDGPALKKAD---VGFAMGIAGTDVAKE-ASDIILTDDNFSS 284 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~--~~~~~va~iGDg~ND~~mLk~A~---vGiamg~~~~~~ak~-aad~vl~~~~~~~ 284 (591)
...+..+..+++.+++.+ + ...+.++++||+.||++|.+.|| +++++|....+..+. .+|+++. ++..
T Consensus 147 ---~~~~k~~~~~~~~~~~~l-g~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~e 220 (234)
T 2hcf_A 147 ---LDRNELPHIALERARRMT-GANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAE 220 (234)
T ss_dssp ---SSGGGHHHHHHHHHHHHH-CCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCC
T ss_pred ---cCccchHHHHHHHHHHHh-CCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHh
Confidence 011233455566666663 4 45566777799999999999999 666666443444333 3888886 4555
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+.+.+.
T Consensus 221 l~~~l~ 226 (234)
T 2hcf_A 221 TDEVLA 226 (234)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-07 Score=92.52 Aligned_cols=129 Identities=9% Similarity=-0.030 Sum_probs=92.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+....-.. ++.+.+.
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~------------------------ 164 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPAS-TVFATDV------------------------ 164 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSE-EECGGGS------------------------
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCce-EecHHhc------------------------
Confidence 367899999999999999999999999999999998888874321111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCC-cEEEEECCCCCCHHhhhcCC---eeeeeCCC----------------------
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSR-EVVAVTGDGTNDGPALKKAD---VGFAMGIA---------------------- 264 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~-~~va~iGDg~ND~~mLk~A~---vGiamg~~---------------------- 264 (591)
.....|..+++.++++ ++... +.++++||+.||+.|.+.|| ++|++|.+
T Consensus 165 ----~~~kp~~~~~~~~~~~-lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3iru_A 165 ----VRGRPFPDMALKVALE-LEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQ 239 (277)
T ss_dssp ----SSCTTSSHHHHHHHHH-HTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhh
Confidence 0123456677777777 45555 77778899999999999999 56777732
Q ss_pred -ccHHHH-hcccccccCCChhHHHHHHHH
Q psy8116 265 -GTDVAK-EASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 265 -~~~~ak-~aad~vl~~~~~~~i~~~i~~ 291 (591)
..+..+ ..+|+++. ++..+.+++..
T Consensus 240 ~~~~~l~~~~ad~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 240 HAEQRLFNAGAHYVID--SVADLETVITD 266 (277)
T ss_dssp HHHHHHHHHTCSEEES--SGGGTHHHHHH
T ss_pred hhHHHHhhCCCCEEec--CHHHHHHHHHH
Confidence 123333 45999987 78888877763
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.45 E-value=5.7e-07 Score=86.40 Aligned_cols=124 Identities=17% Similarity=0.187 Sum_probs=90.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++. +++.++|+.....+....+.+|+...-+. ++.+.+.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~~~~~------------------------- 151 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITTSEEA------------------------- 151 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEHHHH-------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEecccc-------------------------
Confidence 5779999999999999 99999999999999999999998432111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCC---eeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKAD---VGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~---vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.....|..+++.+++. ++...+.++++||+. ||+.|.+.|| +++++| ++.+..+..||+++. ++..+.+
T Consensus 152 ---~~~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~ 224 (234)
T 3u26_A 152 ---GFFKPHPRIFELALKK-AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIK 224 (234)
T ss_dssp ---TBCTTSHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHH
T ss_pred ---CCCCcCHHHHHHHHHH-cCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHH
Confidence 0022345556666666 455566677779997 9999999999 677778 444555668999987 7888887
Q ss_pred HHH
Q psy8116 288 AVM 290 (591)
Q Consensus 288 ~i~ 290 (591)
++.
T Consensus 225 ~l~ 227 (234)
T 3u26_A 225 IVD 227 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.4e-07 Score=90.48 Aligned_cols=127 Identities=12% Similarity=0.130 Sum_probs=91.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 148 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--LISVDEV------------------------ 148 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEEGGGT------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce--eEehhhc------------------------
Confidence 46789999999999999999999999999999999999998432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC---CccHHHHhcccccccCCChhHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI---AGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~---~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.....|..+++.+++.+ +...+.++++||+.||+.|.+.||++++|-+ +..+..+..+|+++. ++..+.+
T Consensus 149 ----~~~kp~~~~~~~~~~~~-~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~ 221 (230)
T 3um9_A 149 ----RLFKPHQKVYELAMDTL-HLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLAS 221 (230)
T ss_dssp ----TCCTTCHHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHH
T ss_pred ----ccCCCChHHHHHHHHHh-CCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHH
Confidence 01233456677777764 5555667777999999999999999999832 333444668899887 7777776
Q ss_pred HHH
Q psy8116 288 AVM 290 (591)
Q Consensus 288 ~i~ 290 (591)
++.
T Consensus 222 ~l~ 224 (230)
T 3um9_A 222 RFS 224 (230)
T ss_dssp TCC
T ss_pred HHH
Confidence 554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.5e-07 Score=90.61 Aligned_cols=127 Identities=9% Similarity=0.013 Sum_probs=93.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.. +.+.+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------ 151 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV--LSVDAV------------------------ 151 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--EEGGGT------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--EEeccc------------------------
Confidence 457899999999999999999999999999999999999985322211 111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee----CCCccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM----GIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam----g~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||++++| + ++.+..+..+|+++. ++..+.
T Consensus 152 ----~~~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~ 223 (233)
T 3umb_A 152 ----RLYKTAPAAYALAPRA-FGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLL 223 (233)
T ss_dssp ----TCCTTSHHHHTHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHH
T ss_pred ----CCCCcCHHHHHHHHHH-hCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHH
Confidence 0122344555566665 345556677779999999999999999999 5 344444677999988 889998
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
+++..
T Consensus 224 ~~l~~ 228 (233)
T 3umb_A 224 QFVQA 228 (233)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 88764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.7e-07 Score=87.72 Aligned_cols=132 Identities=16% Similarity=0.207 Sum_probs=90.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.. +.++... -.+. ....
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~~~f~~~-~~~~-------------------~~~~ 142 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA--TNVFANR-LKFY-------------------FNGE 142 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG--GGEEEEC-EEEC-------------------TTSC
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc--ccEEeee-EEEc-------------------CCCc
Confidence 3689999999999999999999999999999999999999842 1111100 0000 0000
Q ss_pred EEEe------cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCc-cHHHHhcccccccCCChh
Q psy8116 211 VLAR------SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAG-TDVAKEASDIILTDDNFS 283 (591)
Q Consensus 211 v~~r------~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~-~~~ak~aad~vl~~~~~~ 283 (591)
+.+. +.+..|..+++.+++.+ +. +.++++||+.||+++.+.||++|+++... .+.....+|+++. ++.
T Consensus 143 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~-~~--~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~ 217 (225)
T 1nnl_A 143 YAGFDETQPTAESGGKGKVIKLLKEKF-HF--KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFV 217 (225)
T ss_dssp EEEECTTSGGGSTTHHHHHHHHHHHHH-CC--SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGG
T ss_pred EecCCCCCcccCCCchHHHHHHHHHHc-CC--CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHH
Confidence 1111 12346777888777763 33 56788899999999999999998887432 2344566888886 666
Q ss_pred HHHHHH
Q psy8116 284 SIVKAV 289 (591)
Q Consensus 284 ~i~~~i 289 (591)
.+.+++
T Consensus 218 el~~~l 223 (225)
T 1nnl_A 218 ELLGEL 223 (225)
T ss_dssp GGCC--
T ss_pred HHHHHH
Confidence 665443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.1e-07 Score=87.16 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=81.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.+.++.+++.|+++.++|+....... ..+.+|+.. .+- ++.+.+.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~---~f~~~~~~~~~------------------------ 136 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES---YFTEILTSQSG------------------------ 136 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG---GEEEEECGGGC------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh---heeeEEecCcC------------------------
Confidence 46899999999999999999999999988877 778888732 111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
.....+..+++.+++. ++...+.++++||+.||++|++.||++ ++|++ +.+ .||+++. ++..+.+++
T Consensus 137 ----~~~Kp~~~~~~~~~~~-~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~-~~~----~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 137 ----FVRKPSPEAATYLLDK-YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLE-STY----EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp ----CCCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEESSC-CSC----TTEEECS--STTHHHHHT
T ss_pred ----CCCCCCcHHHHHHHHH-hCCCcccEEEECCCHHHHHHHHHCCCeEEEEec-CCC----CCCEEeC--CHHHHHHHH
Confidence 0011124455556555 355556677779999999999999997 77874 442 6898886 566666544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=7.4e-07 Score=88.23 Aligned_cols=155 Identities=8% Similarity=0.029 Sum_probs=91.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCCCCCceEEecchhhHHh--------------------
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTG---DNINTARSIATKCGILKPGDDFLILEGKEFNRR-------------------- 189 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~-------------------- 189 (591)
+.+++.++|++++++|++|+++|| +..........++|+..+.+.++..++......
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQA 102 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHCTTCEEEEESCHHHHHH
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHHHHHHhhCCCCEEEEEeChhHHHH
Confidence 557899999999999999999988 777788888888998654444443333221110
Q ss_pred hhcc----------------cc----hhhHHHHhhhcCcceEEE---------------e-----------------cCh
Q psy8116 190 VRDA----------------NG----DVQQHLLDKVWPRLRVLA---------------R-----------------SSP 217 (591)
Q Consensus 190 ~~~~----------------~~----~~~~~~l~~~~~~~~v~~---------------r-----------------~sp 217 (591)
.... .. ....+.+........+++ . ...
T Consensus 103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (266)
T 3pdw_A 103 IEENGLTFGGENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIG 182 (266)
T ss_dssp HHHTTCEECCTTCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECS
T ss_pred HHHcCCccCCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccC
Confidence 0000 00 000000000000001000 0 011
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeeeeCC---CccHHHHh---cccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFAMGI---AGTDVAKE---ASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGiamg~---~~~~~ak~---aad~vl~~~~~~~i~~~i~ 290 (591)
..|..+++.+++++ +...+.++++||+ .||+.|++.||++.++.+ ++.+..++ .||+++. ++..+.+-++
T Consensus 183 kp~~~~~~~~~~~l-gi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~--~~~el~~~~~ 259 (266)
T 3pdw_A 183 KPESIIMEQAMRVL-GTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID--SLTEWIPYIE 259 (266)
T ss_dssp TTSSHHHHHHHHHH-TCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES--SGGGGHHHHH
T ss_pred CCCHHHHHHHHHHc-CCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC--CHHHHHHHhh
Confidence 24557788888874 5555666777999 799999999998766543 34444455 4999987 7777776655
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.4e-07 Score=88.99 Aligned_cols=122 Identities=12% Similarity=0.123 Sum_probs=86.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.. +.+.+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------- 141 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIV--LSGEEF------------------------- 141 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EEGGGC-------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeE--eecccc-------------------------
Confidence 57899999999999999999999999999999999999984321211 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCc-cHHHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAG-TDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~-~~~ak~aad~vl~~~~~~~i~ 286 (591)
..+..|..+++.+++. ++...+.++++||+.||+.|.+.||+++++.+.+ ....+..+|+++. ++..+.
T Consensus 142 ---~~~kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 142 ---KESKPNPEIYLTALKQ-LNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp ---SSCTTSSHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred ---cCCCCChHHHHHHHHH-cCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 0112245556666666 4555667777899999999999999988876443 2333467888887 555544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.35 E-value=5.6e-07 Score=86.02 Aligned_cols=120 Identities=8% Similarity=0.044 Sum_probs=86.7
Q ss_pred CCCCchHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAG-ITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aG-I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|++.| +++.++|+.....+..+.+.+|+...-+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--------------------------------- 151 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH--------------------------------- 151 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe---------------------------------
Confidence 57899999999999999 99999999998888888888887321111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeee-------CCCccHHHHhcccccccCCCh
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAM-------GIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiam-------g~~~~~~ak~aad~vl~~~~~ 282 (591)
+++. +..|..+++.+++++ +...+.++++||+. ||+.|.+.||+++++ |+...+.....+|+++. ++
T Consensus 152 ~~~~--~kpk~~~~~~~~~~l-gi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l 226 (234)
T 3ddh_A 152 IEVM--SDKTEKEYLRLLSIL-QIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RL 226 (234)
T ss_dssp EEEE--SCCSHHHHHHHHHHH-TCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SG
T ss_pred eeec--CCCCHHHHHHHHHHh-CCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cH
Confidence 1122 234778888888874 55566677779996 999999999998876 32222222233488887 77
Q ss_pred hHHHHHH
Q psy8116 283 SSIVKAV 289 (591)
Q Consensus 283 ~~i~~~i 289 (591)
..+.+++
T Consensus 227 ~el~~~l 233 (234)
T 3ddh_A 227 DDLLSLL 233 (234)
T ss_dssp GGHHHHC
T ss_pred HHHHHhc
Confidence 7776543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=6e-07 Score=88.96 Aligned_cols=157 Identities=18% Similarity=0.190 Sum_probs=94.8
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCCCCCceEEecchhhH-------------------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTG---DNINTARSIATKCGILKPGDDFLILEGKEFN------------------- 187 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~------------------- 187 (591)
.+.+-|++.++|++++++|++++++|| +.........+.+|+..+.+.++..+|....
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~l 101 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATARFIAREKPNAKVFTTGEEGL 101 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHSTTCEEEECCCHHH
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHHHHHHhhCCCCeEEEEcCHHH
Confidence 344668899999999999999999999 6777777888888986544444443332111
Q ss_pred -Hhhhcc-----------------cc----hhhHHHHhhhcCcceEEE--------------------------------
Q psy8116 188 -RRVRDA-----------------NG----DVQQHLLDKVWPRLRVLA-------------------------------- 213 (591)
Q Consensus 188 -~~~~~~-----------------~~----~~~~~~l~~~~~~~~v~~-------------------------------- 213 (591)
...... .. ......+..........+
T Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (268)
T 3qgm_A 102 IEELRLAGLEIVDYDEAEYLVVGSNRKINFELMTKALRACLRGIRYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREP 181 (268)
T ss_dssp HHHHHHTTCEECCTTTCSEEEECCCTTCBHHHHHHHHHHHHHTCEEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCC
T ss_pred HHHHHHcCCeecCCCCCCEEEEecCCCCCHHHHHHHHHHHhCCCcEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCc
Confidence 000000 00 000000000000000000
Q ss_pred -ecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCC---eeeeeCCCccHHHH-------hcccccccCCC
Q psy8116 214 -RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKAD---VGFAMGIAGTDVAK-------EASDIILTDDN 281 (591)
Q Consensus 214 -r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~---vGiamg~~~~~~ak-------~aad~vl~~~~ 281 (591)
-.....|..+++.+++++ +...+.++++||+ .||+.|.+.|| ++|++|+...+... ..+|+++. +
T Consensus 182 ~~~~~kp~~~~~~~~~~~~-~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~--~ 258 (268)
T 3qgm_A 182 DVVVGKPSEVIMREALDIL-GLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFN--S 258 (268)
T ss_dssp SEECSTTSHHHHHHHHHHH-TCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEES--S
T ss_pred ceecCCCCHHHHHHHHHHh-CCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEEC--C
Confidence 001234667788888874 5556677788999 69999999999 78888854433322 16899887 7
Q ss_pred hhHHHHHH
Q psy8116 282 FSSIVKAV 289 (591)
Q Consensus 282 ~~~i~~~i 289 (591)
+..+.+++
T Consensus 259 ~~el~~~l 266 (268)
T 3qgm_A 259 LKDMVEAL 266 (268)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 77776654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.2e-06 Score=84.14 Aligned_cols=126 Identities=6% Similarity=0.033 Sum_probs=92.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|+ .|+++.++|+.....+....+.+|+...-+.. +.+.+.
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------ 158 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--ILSEDL------------------------ 158 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE--EEGGGT------------------------
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE--EEeccC------------------------
Confidence 357899999999999 99999999999999999999999884321111 111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeeeCCCccH-HHHhcccccccCCChhHHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAMGIAGTD-VAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiamg~~~~~-~ak~aad~vl~~~~~~~i~~~ 288 (591)
.....|..+++.+++. ++...+.++++||+. ||+.|.+.||++++|.+.+.. ..+..+|+++. ++..+..+
T Consensus 159 ----~~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 159 ----GVLKPRPEIFHFALSA-TQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp ----TCCTTSHHHHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 0123456677777776 455667777889995 999999999999999866552 34567899988 67777655
Q ss_pred HH
Q psy8116 289 VM 290 (591)
Q Consensus 289 i~ 290 (591)
.+
T Consensus 232 ~~ 233 (240)
T 3qnm_A 232 LE 233 (240)
T ss_dssp TC
T ss_pred Hh
Confidence 43
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.3e-07 Score=85.75 Aligned_cols=122 Identities=14% Similarity=0.094 Sum_probs=84.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+..+ .+.+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~--~~~~~------------------------- 155 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSII--GSGDT------------------------- 155 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE--EETSS-------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEE--ccccc-------------------------
Confidence 478999999999999999999999999999999999999843111111 11100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCc-EEEEECCCCCCHHhhhcCCe-eeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSRE-VVAVTGDGTNDGPALKKADV-GFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~-~va~iGDg~ND~~mLk~A~v-Giamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
.....|..+++.+++.+ +...+ .++++||+.||+.|.+.||+ +++++ ++.+ ..+|+++. ++..+.+++
T Consensus 156 ---~~~Kp~~~~~~~~~~~l-gi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l 225 (231)
T 3kzx_A 156 ---GTIKPSPEPVLAALTNI-NIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFI 225 (231)
T ss_dssp ---SCCTTSSHHHHHHHHHH-TCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHH
T ss_pred ---CCCCCChHHHHHHHHHc-CCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHH
Confidence 01223345566666664 44444 67777999999999999996 67777 3333 35677776 788887766
Q ss_pred H
Q psy8116 290 M 290 (591)
Q Consensus 290 ~ 290 (591)
.
T Consensus 226 ~ 226 (231)
T 3kzx_A 226 C 226 (231)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.31 E-value=8.7e-07 Score=84.40 Aligned_cols=120 Identities=13% Similarity=0.157 Sum_probs=88.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+...-+..+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~-------------------------------- 130 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIY-------------------------------- 130 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeee--------------------------------
Confidence 467999999999999 99999999999888888888999843211111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHHHH-hcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTDVAK-EASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~ak-~aad~vl~~~~~~~i~~ 287 (591)
.+...+..|..+++.++++ ++...+.++++||+.||+.|.+.||+ ++++|....+..+ ..+|+++. ++..+.+
T Consensus 131 ~~~~~~Kp~p~~~~~~~~~-lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 131 GSSPEAPHKADVIHQALQT-HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp EECSSCCSHHHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred cCCCCCCCChHHHHHHHHH-cCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 1111234577788888777 45566677888999999999999998 7777744344444 36898887 5665554
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.31 E-value=9.9e-07 Score=85.46 Aligned_cols=127 Identities=12% Similarity=0.068 Sum_probs=83.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-ceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD-DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~-~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.++.|++.+.++.|++.|+++.++|+.....+...... |+...-. +. ++.+.+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~-~~~~~~~----------------------- 161 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL-MVTAFDV----------------------- 161 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG-EECGGGC-----------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe-EEecccC-----------------------
Confidence 46789999999999999999999999988877777777 7743210 11 1111110
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eee--CCCccHH-HHhcccccccCCChhHH
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAM--GIAGTDV-AKEASDIILTDDNFSSI 285 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iam--g~~~~~~-ak~aad~vl~~~~~~~i 285 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||++ +++ |....+. .+..||+++. ++..+
T Consensus 162 -----~~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el 233 (247)
T 3dv9_A 162 -----KYGKPNPEPYLMALKK-GGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDF 233 (247)
T ss_dssp -----SSCTTSSHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHH
T ss_pred -----CCCCCCCHHHHHHHHH-cCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHH
Confidence 0123345566666666 455556677779999999999999964 333 3222222 2347999987 78888
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+++.
T Consensus 234 ~~~l~ 238 (247)
T 3dv9_A 234 NKNWE 238 (247)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.1e-06 Score=85.50 Aligned_cols=124 Identities=12% Similarity=0.179 Sum_probs=86.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. .-+ . ++.+.+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~-~-~~~~~~~------------------------- 161 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD-F-ALGEKSG------------------------- 161 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS-E-EEEECTT-------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee-E-EEecCCC-------------------------
Confidence 36689999999999999999999999988888888888873 211 1 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccHHHH-hcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTDVAK-EASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~~ak-~aad~vl~~~~~~~i~~ 287 (591)
..+..|..++..+++. ++...+.++++||+.||+.|.+.||+. +++|....+..+ ..+|+++. ++..+..
T Consensus 162 ---~~~Kp~p~~~~~~~~~-l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~ 235 (240)
T 2hi0_A 162 ---IRRKPAPDMTSECVKV-LGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEE 235 (240)
T ss_dssp ---SCCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHH
Confidence 0133455666666666 455566777889999999999999984 556633323333 46888886 6777765
Q ss_pred HH
Q psy8116 288 AV 289 (591)
Q Consensus 288 ~i 289 (591)
.+
T Consensus 236 ~l 237 (240)
T 2hi0_A 236 AI 237 (240)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.29 E-value=5e-06 Score=80.60 Aligned_cols=125 Identities=12% Similarity=0.116 Sum_probs=86.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 146 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEH--VIISDFE------------------------- 146 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSE--EEEGGGG-------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccE--EEEeCCC-------------------------
Confidence 5789999999999999999999999999988999999998431111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeee---CCCccHHHHh---cccccccCCChhH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAM---GIAGTDVAKE---ASDIILTDDNFSS 284 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiam---g~~~~~~ak~---aad~vl~~~~~~~ 284 (591)
.....|..+++.+++. ++...+.++++||+. ||+.|.+.||++++. | .+...... .+|+++. ++..
T Consensus 147 ---~~~Kp~~~~~~~~~~~-~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~e 219 (241)
T 2hoq_A 147 ---GVKKPHPKIFKKALKA-FNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLES 219 (241)
T ss_dssp ---TCCTTCHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTH
T ss_pred ---CCCCCCHHHHHHHHHH-cCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHH
Confidence 0112334556666665 345556677889998 999999999987554 4 23333332 6888876 6777
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+.+.+.
T Consensus 220 l~~~l~ 225 (241)
T 2hoq_A 220 LLEVLA 225 (241)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766553
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.8e-07 Score=93.39 Aligned_cols=130 Identities=11% Similarity=0.053 Sum_probs=91.6
Q ss_pred CCCCCchHHHHHHHHHcCC--EEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 131 DPVRPEVPDAIRKCQRAGI--TVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI--~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-+.. +.+.....
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v--~~~~~~~~-------------------- 198 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL--TYCDYSRT-------------------- 198 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE--ECCCCSSC--------------------
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE--EEeccCCC--------------------
Confidence 3578999999999999999 99999999999999999999985322211 11110000
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCC-cEEEEECCCCCCHHhhhcCCeeeeeCCCccHHH-----HhcccccccCCCh
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSR-EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVA-----KEASDIILTDDNF 282 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~-~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~a-----k~aad~vl~~~~~ 282 (591)
....+..|..+++.+++.+ +... +.++++||+.||+.|.+.||+|.+|+++..... ...||+++. ++
T Consensus 199 ----~~~~~Kp~~~~~~~~~~~l-gi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl 271 (282)
T 3nuq_A 199 ----DTLVCKPHVKAFEKAMKES-GLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DI 271 (282)
T ss_dssp ----SSCCCTTSHHHHHHHHHHH-TCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SG
T ss_pred ----cccCCCcCHHHHHHHHHHc-CCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CH
Confidence 0012345777888887774 5554 677778999999999999999999885544321 236788877 66
Q ss_pred hHHHHHH
Q psy8116 283 SSIVKAV 289 (591)
Q Consensus 283 ~~i~~~i 289 (591)
..+.+++
T Consensus 272 ~el~~~l 278 (282)
T 3nuq_A 272 LELPHVV 278 (282)
T ss_dssp GGGGGTS
T ss_pred HHHHHHh
Confidence 6665543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.28 E-value=6.8e-07 Score=82.86 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=82.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCceEEecc-hhhHHhhhcc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNI---------------NTARSIATKCG--ILKPGDDFLILEG-KEFNRRVRDA 193 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~g--i~~~~~~~i~l~g-~~~~~~~~~~ 193 (591)
++.|++.++|+.|+++|+++.++|+... ..+..+.+.+| +. ..+.+..+ .+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~~------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD---AIFMCPHGPDDG------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC---EEEEECCCTTSC-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee---EEEEcCCCCCCC-------
Confidence 5789999999999999999999999985 45566666677 31 11111110 000
Q ss_pred cchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC---eeeeeCCCccHHHH
Q psy8116 194 NGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD---VGFAMGIAGTDVAK 270 (591)
Q Consensus 194 ~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~---vGiamg~~~~~~ak 270 (591)
. ..+..+..+++.+++. ++...+.++++||+.||+.|.+.|| +++++|. +.....
T Consensus 97 ------------------~--~~~KP~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~-~~~~~~ 154 (179)
T 3l8h_A 97 ------------------C--ACRKPLPGMYRDIARR-YDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGN-GRKTLA 154 (179)
T ss_dssp ------------------C--SSSTTSSHHHHHHHHH-HTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTT-HHHHHH
T ss_pred ------------------C--CCCCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCC-cchhhh
Confidence 0 0112233455555555 3555666777799999999999999 4777773 333333
Q ss_pred ----hcccccccCCChhHHHHHHH
Q psy8116 271 ----EASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 271 ----~aad~vl~~~~~~~i~~~i~ 290 (591)
..+|+++. ++..+.+.+.
T Consensus 155 ~~~~~~~d~v~~--~l~el~~~l~ 176 (179)
T 3l8h_A 155 QGGLPEGTRVCE--DLAAVAEQLL 176 (179)
T ss_dssp HCCCCTTEEEES--SHHHHHHHHH
T ss_pred hcccCCCcEEec--CHHHHHHHHH
Confidence 45799888 7888887765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=8.7e-07 Score=85.92 Aligned_cols=126 Identities=11% Similarity=0.065 Sum_probs=86.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~----------------------- 158 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS--CLSADDLK----------------------- 158 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGTT-----------------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE--EEEccccC-----------------------
Confidence 36789999999999999999999999999999999999998432121 11111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccHHHHhcc-cccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTDVAKEAS-DIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~~ak~aa-d~vl~~~~~~~i~ 286 (591)
....|..+++.+++. ++...+.++++||+.||+.|.+.||+. ++.|+. .+..+..+ |+++. ++..+.
T Consensus 159 -----~~Kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~--~~~el~ 229 (240)
T 2no4_A 159 -----IYKPDPRIYQFACDR-LGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVN--SLSELW 229 (240)
T ss_dssp -----CCTTSHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEES--SGGGHH
T ss_pred -----CCCCCHHHHHHHHHH-cCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeC--CHHHHH
Confidence 122344556666665 344556677779999999999999955 444532 22224456 88876 777777
Q ss_pred HHHH
Q psy8116 287 KAVM 290 (591)
Q Consensus 287 ~~i~ 290 (591)
+.+.
T Consensus 230 ~~l~ 233 (240)
T 2no4_A 230 PLLA 233 (240)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 6653
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-06 Score=86.25 Aligned_cols=131 Identities=11% Similarity=0.095 Sum_probs=91.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. .++.+.+..
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-~i~~~~~~~---------------------- 164 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE-HIYDPSWVG---------------------- 164 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS-CEECGGGGT----------------------
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc-eEEeHhhcC----------------------
Confidence 345789999999999999999999999999999999999987311011 011111100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCC--c----c-HHHHhcccccccCCC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIA--G----T-DVAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~--~----~-~~ak~aad~vl~~~~ 281 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||++ +.+... . . +..+..+|+++. +
T Consensus 165 -----~~~Kp~~~~~~~~~~~-lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~--~ 236 (259)
T 4eek_A 165 -----GRGKPHPDLYTFAAQQ-LGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLT--S 236 (259)
T ss_dssp -----TCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEEC--S
T ss_pred -----cCCCCChHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhC--C
Confidence 0122345566677666 466667778889999999999999998 444311 1 2 333456899988 8
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
+..+.+++..
T Consensus 237 l~el~~~l~~ 246 (259)
T 4eek_A 237 HAELRAALAE 246 (259)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.26 E-value=2.7e-06 Score=81.76 Aligned_cols=126 Identities=12% Similarity=0.078 Sum_probs=90.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|++. +++.++|+.....+....+.+|+...-+.. +.+.+.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------ 154 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI--FVSEDT------------------------ 154 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE--EEGGGT------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE--EEeccc------------------------
Confidence 36789999999999999 999999999999999999999884321111 111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcC-CCCcEEEEECCCC-CCHHhhhcCCeeeeeCCCc--cHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVS-DSREVVAVTGDGT-NDGPALKKADVGFAMGIAG--TDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~-~~~~~va~iGDg~-ND~~mLk~A~vGiamg~~~--~~~ak~aad~vl~~~~~~~i~ 286 (591)
.....|..+++.+++. ++ ...+.++++||+. ||+.|.+.||++.++-+.+ .+..+..+|+++. ++..+.
T Consensus 155 ----~~~kp~~~~~~~~~~~-~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~ 227 (238)
T 3ed5_A 155 ----GFQKPMKEYFNYVFER-IPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELY 227 (238)
T ss_dssp ----TSCTTCHHHHHHHHHT-STTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHH
T ss_pred ----CCCCCChHHHHHHHHH-cCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHH
Confidence 0123456677777776 45 5667777789998 9999999999954432233 4445678899987 788888
Q ss_pred HHHH
Q psy8116 287 KAVM 290 (591)
Q Consensus 287 ~~i~ 290 (591)
+++.
T Consensus 228 ~~l~ 231 (238)
T 3ed5_A 228 HILN 231 (238)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7765
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.25 E-value=5.7e-07 Score=86.47 Aligned_cols=125 Identities=19% Similarity=0.196 Sum_probs=86.7
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~------------------------ 135 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--IVGGDTF------------------------ 135 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTSS------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE--EEecCcC------------------------
Confidence 35789999999999999999999999999999999999997421111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeC--CCccHHHHhcccccccCCChhHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMG--IAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg--~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
..+..|..+++.+++. ++...+.++++||+.||++|.+.||++ +++. .+..+. ..+|+++. ++..+.+
T Consensus 136 ----~~~Kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--~~~~~~~~--~~~el~~ 206 (222)
T 2nyv_A 136 ----GEKKPSPTPVLKTLEI-LGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--QIPDFTLS--RPSDLVK 206 (222)
T ss_dssp ----CTTCCTTHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--CCCSEEES--STTHHHH
T ss_pred ----CCCCCChHHHHHHHHH-hCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--cCCCEEEC--CHHHHHH
Confidence 0122345555555555 355566777889999999999999987 5544 222222 56888876 6777776
Q ss_pred HHH
Q psy8116 288 AVM 290 (591)
Q Consensus 288 ~i~ 290 (591)
++.
T Consensus 207 ~l~ 209 (222)
T 2nyv_A 207 LMD 209 (222)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.24 E-value=4.2e-07 Score=88.81 Aligned_cols=124 Identities=19% Similarity=0.257 Sum_probs=84.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+ .++.+.+..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~----------------------- 167 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLP----------------------- 167 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSS-----------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE--EEEecccCC-----------------------
Confidence 3577999999999999999999999999999999999999843111 112221110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee-eCC--C-ccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA-MGI--A-GTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia-mg~--~-~~~~ak~aad~vl~~~~~~~i~ 286 (591)
...| |..+++.+++. ++...+.++++||+.||++|.+.||++++ +.. . +.+..+..+|+++. ++..+.
T Consensus 168 ---~~Kp--~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 168 ---EIKP--HPAPFYYLCGK-FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp ---SCTT--SSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred ---CCCc--CHHHHHHHHHH-hCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 0112 33455555555 35556677788999999999999998744 331 1 23344677898886 565554
Q ss_pred H
Q psy8116 287 K 287 (591)
Q Consensus 287 ~ 287 (591)
+
T Consensus 240 ~ 240 (243)
T 2hsz_A 240 K 240 (243)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.23 E-value=9.7e-07 Score=85.76 Aligned_cols=126 Identities=11% Similarity=0.082 Sum_probs=85.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-ceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD-DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~-~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.++.|++.+.++.|++.|+++.++|+.....+...... |+...-+ +. ++.+.+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~-i~~~~~~----------------------- 162 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKEL-MVTAFDV----------------------- 162 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGG-EECTTTC-----------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcce-EEeHHhC-----------------------
Confidence 46789999999999999999999999987777777666 7743110 11 1111110
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCcc----HHHHhcccccccCCChhH
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGT----DVAKEASDIILTDDNFSS 284 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~----~~ak~aad~vl~~~~~~~ 284 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||++ +++. .+. +..+..||+++. ++..
T Consensus 163 -----~~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~e 233 (243)
T 3qxg_A 163 -----KYGKPNPEPYLMALKK-GGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQT 233 (243)
T ss_dssp -----SSCTTSSHHHHHHHHH-TTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHH
T ss_pred -----CCCCCChHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHH
Confidence 0123345566666666 455666677789999999999999985 4444 222 223347999987 8888
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+.+++.
T Consensus 234 l~~~l~ 239 (243)
T 3qxg_A 234 LCDSWD 239 (243)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877665
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.22 E-value=6.2e-07 Score=86.32 Aligned_cols=126 Identities=12% Similarity=0.155 Sum_probs=86.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.. +.+.+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------- 147 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHL--LSVDPV------------------------- 147 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EESGGG-------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheE--EEeccc-------------------------
Confidence 57899999999999999999999999999999999999984321211 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCc---cHHHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAG---TDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~---~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||+++++-..+ .+..+..+|+++. ++..+...
T Consensus 148 ---~~~Kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 221 (232)
T 1zrn_A 148 ---QVYKPDNRVYELAEQA-LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 221 (232)
T ss_dssp ---TCCTTSHHHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred ---CCCCCCHHHHHHHHHH-cCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHH
Confidence 0122334455555555 3445556777799999999999999998873222 2223456888876 67777665
Q ss_pred HH
Q psy8116 289 VM 290 (591)
Q Consensus 289 i~ 290 (591)
+.
T Consensus 222 l~ 223 (232)
T 1zrn_A 222 FE 223 (232)
T ss_dssp C-
T ss_pred HH
Confidence 54
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.21 E-value=9.7e-07 Score=86.02 Aligned_cols=123 Identities=13% Similarity=0.114 Sum_probs=90.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. -.. ++.+...
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~-~~~~~~~------------------------- 169 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM-LLCADLF------------------------- 169 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE-ECCHHHH-------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce-EEeeccc-------------------------
Confidence 4678999999999985 999999999999999999999983 111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC----Ccc---HH--HHhcccccccCCCh
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI----AGT---DV--AKEASDIILTDDNF 282 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~----~~~---~~--ak~aad~vl~~~~~ 282 (591)
.....|..+++.+++.+ +...+.++++||+.||+.|.+.||++++|.+ .+. +. .+..||+++. ++
T Consensus 170 ---~~~kp~~~~~~~~~~~l-gi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l 243 (254)
T 3umc_A 170 ---GHYKPDPQVYLGACRLL-DLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DL 243 (254)
T ss_dssp ---TCCTTSHHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SH
T ss_pred ---ccCCCCHHHHHHHHHHc-CCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CH
Confidence 12345677777777774 5556667777999999999999999999985 222 12 2567899988 78
Q ss_pred hHHHHHHH
Q psy8116 283 SSIVKAVM 290 (591)
Q Consensus 283 ~~i~~~i~ 290 (591)
..+.+++.
T Consensus 244 ~el~~~l~ 251 (254)
T 3umc_A 244 LDLHRQLA 251 (254)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 88877664
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=2.3e-06 Score=81.86 Aligned_cols=137 Identities=18% Similarity=0.129 Sum_probs=85.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDN---------------INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG 195 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~ 195 (591)
-++.|++.++|+.|+++|+++.++|+.. ...+..+.+++|+. -+. +...+........
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~-~~~~~~~~~~~~~---- 121 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDG-IYYCPHHPQGSVE---- 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSE-EEEECCBTTCSSG----
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEE-EEECCcCCCCccc----
Confidence 3678999999999999999999999999 46777788888874 111 1111110000000
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe----eeeeCCCccHHHHh
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV----GFAMGIAGTDVAKE 271 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v----Giamg~~~~~~ak~ 271 (591)
.. .. .. .....|..+++.+++. +....+.++++||+.||+.+.+.||+ ++..|....+....
T Consensus 122 --------~~-~~--~~--~~~KP~p~~~~~~~~~-lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~ 187 (211)
T 2gmw_A 122 --------EF-RQ--VC--DCRKPHPGMLLSARDY-LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAEN 187 (211)
T ss_dssp --------GG-BS--CC--SSSTTSCHHHHHHHHH-HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHH
T ss_pred --------cc-Cc--cC--cCCCCCHHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccC
Confidence 00 00 00 0112233455555555 34455667788999999999999995 44444333344445
Q ss_pred cccccccCCChhHHHHHHH
Q psy8116 272 ASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 272 aad~vl~~~~~~~i~~~i~ 290 (591)
.+|+++. ++..+.+++.
T Consensus 188 ~~d~vi~--~l~el~~~l~ 204 (211)
T 2gmw_A 188 AADWVLN--SLADLPQAIK 204 (211)
T ss_dssp HCSEEES--CGGGHHHHHH
T ss_pred CCCEEeC--CHHHHHHHHH
Confidence 6898887 7888877664
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.1e-06 Score=82.06 Aligned_cols=124 Identities=12% Similarity=0.104 Sum_probs=85.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC-CceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG-DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~-~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
-++.+++.+.++.++. ++.++|+.....+..+.+++|+...- +.. ..+...
T Consensus 86 ~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~--~~~~~~----------------------- 137 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHI--YSAKDL----------------------- 137 (229)
T ss_dssp CCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCE--EEHHHH-----------------------
T ss_pred CccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceE--Eecccc-----------------------
Confidence 3567889998888764 89999999999999999999884321 111 111110
Q ss_pred eEEEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCcc------HHHHhc-ccccccC
Q psy8116 210 RVLARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGT------DVAKEA-SDIILTD 279 (591)
Q Consensus 210 ~v~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~------~~ak~a-ad~vl~~ 279 (591)
... ..|..+++.+++++ +...+.++++||+.||++|++.||++ +++++... +..++. ||+++.
T Consensus 138 -----~~~~~kpk~~~~~~~~~~l-~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~- 210 (229)
T 2fdr_A 138 -----GADRVKPKPDIFLHGAAQF-GVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS- 210 (229)
T ss_dssp -----CTTCCTTSSHHHHHHHHHH-TCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES-
T ss_pred -----ccCCCCcCHHHHHHHHHHc-CCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec-
Confidence 112 34667777777774 55556677779999999999999998 66663322 235666 999987
Q ss_pred CChhHHHHHHH
Q psy8116 280 DNFSSIVKAVM 290 (591)
Q Consensus 280 ~~~~~i~~~i~ 290 (591)
+...+.+.+.
T Consensus 211 -~~~el~~~l~ 220 (229)
T 2fdr_A 211 -RMQDLPAVIA 220 (229)
T ss_dssp -CGGGHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 6677766554
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-06 Score=83.31 Aligned_cols=141 Identities=15% Similarity=0.177 Sum_probs=89.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.-++.|++.++++.|+++|+++.++|+.....+..+.+ |+... +.++..+. .... +.... .. ..+..
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~-~~~~------~~~~~-~~--~kp~p 141 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHA-SFDN------DYIHI-DW--PHSCK 141 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEE-ECSS------SBCEE-EC--TTCCC
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeee-EEcC------CceEE-ec--CCCCc
Confidence 35789999999999999999999999999988888887 76432 33222111 0000 00000 00 00100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhc--ccccccCCChhHHHH
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEA--SDIILTDDNFSSIVK 287 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~a--ad~vl~~~~~~~i~~ 287 (591)
..+.+.....|..+++. ++...+.++++||+.||+++.+.||+.++.. ...+..+.. +|+++. ++..+.+
T Consensus 142 ~~~~~~~~~~K~~~~~~-----~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~ 213 (236)
T 2fea_A 142 GTCSNQCGCCKPSVIHE-----LSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRK 213 (236)
T ss_dssp TTCCSCCSSCHHHHHHH-----HCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHH
T ss_pred cccccccCCcHHHHHHH-----HhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHH
Confidence 10111124578888876 3556778889999999999999999998753 222333333 778776 7888887
Q ss_pred HHHH
Q psy8116 288 AVMW 291 (591)
Q Consensus 288 ~i~~ 291 (591)
++..
T Consensus 214 ~l~~ 217 (236)
T 2fea_A 214 EIEN 217 (236)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.17 E-value=9.7e-07 Score=87.96 Aligned_cols=115 Identities=12% Similarity=0.024 Sum_probs=80.9
Q ss_pred CCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. -.. ++.+.+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f~~-i~~~~~~------------------------ 166 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--PEY-FITANDV------------------------ 166 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--CSS-EECGGGC------------------------
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--cCE-EEEcccC------------------------
Confidence 4579999999999999 99999999999999999988888742 111 2222211
Q ss_pred EEEecChhhHHHHHHHHHHhhcCC-------CCcEEEEECCCCCCHHhhhcCCeeeee---CCCccHHHHhccccccc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSD-------SREVVAVTGDGTNDGPALKKADVGFAM---GIAGTDVAKEASDIILT 278 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~-------~~~~va~iGDg~ND~~mLk~A~vGiam---g~~~~~~ak~aad~vl~ 278 (591)
.....|..+++.+++. ++. ..+.++++||+.||++|++.||+++++ |++..+..+..||+++.
T Consensus 167 ----~~~kp~~~~~~~~~~~-lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 167 ----KQGKPHPEPYLKGRNG-LGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp ----SSCTTSSHHHHHHHHH-TTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred ----CCCCCChHHHHHHHHH-cCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 0112345556666666 444 556677789999999999999976655 54444443445898876
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.8e-06 Score=83.81 Aligned_cols=124 Identities=11% Similarity=0.053 Sum_probs=91.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. -+. ++.+...
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~--~~~~~~~------------------------- 165 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDV--IIGSDIN------------------------- 165 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSC--CCCHHHH-------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeE--EEEcCcC-------------------------
Confidence 5679999999999997 999999999999999999999983 111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH-------H--HHhcccccccCCCh
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD-------V--AKEASDIILTDDNF 282 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~-------~--ak~aad~vl~~~~~ 282 (591)
.....|..+++.++++ ++...+.++++||+.||+.|.+.||++++|.+.... . .+..+|+++. ++
T Consensus 166 ---~~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~ 239 (254)
T 3umg_A 166 ---RKYKPDPQAYLRTAQV-LGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DI 239 (254)
T ss_dssp ---TCCTTSHHHHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SH
T ss_pred ---CCCCCCHHHHHHHHHH-cCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CH
Confidence 0122345677777777 455666777889999999999999999999852211 1 2567899888 88
Q ss_pred hHHHHHHHH
Q psy8116 283 SSIVKAVMW 291 (591)
Q Consensus 283 ~~i~~~i~~ 291 (591)
..+.+++..
T Consensus 240 ~el~~~l~~ 248 (254)
T 3umg_A 240 TDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcC
Confidence 888887763
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=3e-07 Score=87.15 Aligned_cols=119 Identities=13% Similarity=0.187 Sum_probs=83.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
-++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.. .+- ++.+.+
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~---~f~~~~~~~~------------------------ 133 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMM---RMAVTISADD------------------------ 133 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGG---GEEEEECGGG------------------------
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHh---hccEEEecCc------------------------
Confidence 35789999999999999 9999999999988888888888732 111 111111
Q ss_pred eEEEecChhhH--HHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC---CccHHHHhcccccccCCChhH
Q psy8116 210 RVLARSSPTDK--YTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI---AGTDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 210 ~v~~r~sp~~K--~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~---~~~~~ak~aad~vl~~~~~~~ 284 (591)
....| ..+++.+++. ++...+.++++||+.||++|.+.||+++++.+ ...+..+. ||+++. ++..
T Consensus 134 ------~~~~KP~~~~~~~~~~~-~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~e 203 (209)
T 2hdo_A 134 ------TPKRKPDPLPLLTALEK-VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLD 203 (209)
T ss_dssp ------SSCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGG
T ss_pred ------CCCCCCCcHHHHHHHHH-cCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHH
Confidence 11223 4555666665 45556677888999999999999999998743 22333344 888886 5555
Q ss_pred HHH
Q psy8116 285 IVK 287 (591)
Q Consensus 285 i~~ 287 (591)
+.+
T Consensus 204 l~~ 206 (209)
T 2hdo_A 204 ILE 206 (209)
T ss_dssp GGG
T ss_pred HHH
Confidence 443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.2e-07 Score=88.78 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCceEEecch--hhHHhhhcccchhhHHHHhhhcC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK-CGILKPGDDFLILEGK--EFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~l~g~--~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
-++.|++.+.++.|++.|+++.++|+.....+.....+ .|+...-+. ++.+. +.
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~--~~~~~~~~~--------------------- 167 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSH--IVLGDDPEV--------------------- 167 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSC--EECTTCTTC---------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheee--EEecchhhc---------------------
Confidence 46889999999999999999999999987665543322 233211111 11110 00
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCC--cEEEEECCCCCCHHhhhcCC---eeeeeCCCccHHHHhcccccccCCCh
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSR--EVVAVTGDGTNDGPALKKAD---VGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~--~~va~iGDg~ND~~mLk~A~---vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
.....|..+++.+++. ++... +.++++||+.||+.|.+.|| +++++|+ +.+..+..||+++. ++
T Consensus 168 -------~~~Kp~~~~~~~~~~~-lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~-~~~~~~~~ad~v~~--sl 236 (250)
T 3l5k_A 168 -------QHGKPDPDIFLACAKR-FSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGN-LSRDLTTKATLVLN--SL 236 (250)
T ss_dssp -------CSCTTSTHHHHHHHHT-SSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-SCGGGSTTSSEECS--CG
T ss_pred -------cCCCCChHHHHHHHHH-cCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CchhhcccccEeec--CH
Confidence 0122345567777776 45444 77788899999999999999 6777774 34446889999987 56
Q ss_pred hHHHH
Q psy8116 283 SSIVK 287 (591)
Q Consensus 283 ~~i~~ 287 (591)
..+..
T Consensus 237 ~el~~ 241 (250)
T 3l5k_A 237 QDFQP 241 (250)
T ss_dssp GGCCG
T ss_pred HHhhH
Confidence 55543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.09 E-value=5.6e-06 Score=79.35 Aligned_cols=127 Identities=12% Similarity=0.157 Sum_probs=86.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|++ |+++.++|+.....+....+.++- .-+. ++.+.+...
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~fd~-i~~~~~~~~---------------------- 150 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EFDH-IITAQDVGS---------------------- 150 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CCSE-EEEHHHHTS----------------------
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---ccCE-EEEccccCC----------------------
Confidence 3678999999999999 899999999998887777665432 1111 122211100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeeeCCCc----------cHHHHhcccccccC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAMGIAG----------TDVAKEASDIILTD 279 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiamg~~~----------~~~ak~aad~vl~~ 279 (591)
.+.+|+-...+++. +++ ++...+.++++||+. ||+.|.+.||++++|.+.+ .+..+..||+++.
T Consensus 151 --~KP~~~~~~~~l~~-~~~-lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~- 225 (240)
T 3smv_A 151 --YKPNPNNFTYMIDA-LAK-AGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN- 225 (240)
T ss_dssp --CTTSHHHHHHHHHH-HHH-TTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES-
T ss_pred --CCCCHHHHHHHHHH-HHh-cCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC-
Confidence 12234433345444 444 456667777889996 9999999999999996432 2334578899987
Q ss_pred CChhHHHHHHH
Q psy8116 280 DNFSSIVKAVM 290 (591)
Q Consensus 280 ~~~~~i~~~i~ 290 (591)
++..+.+++.
T Consensus 226 -~~~el~~~l~ 235 (240)
T 3smv_A 226 -SMGEMAEAHK 235 (240)
T ss_dssp -SHHHHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 7888877765
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.8e-06 Score=82.23 Aligned_cols=125 Identities=9% Similarity=0.061 Sum_probs=87.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+...-+.. +.+.+.
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~--~~~~~~------------------------ 143 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAV--ISVDAK------------------------ 143 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EEGGGG------------------------
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEE--EEcccc------------------------
Confidence 367899999999999 9999999999999999999999984321211 111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCC-----------------------c--
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIA-----------------------G-- 265 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~-----------------------~-- 265 (591)
.....|..+++.+++. ++...+.++++||+.||+.|.+.||+++++.+. +
T Consensus 144 ----~~~Kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 218 (253)
T 1qq5_A 144 ----RVFKPHPDSYALVEEV-LGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRM 218 (253)
T ss_dssp ----TCCTTSHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHS
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhccccccccccccccccc
Confidence 0122344555666665 345556677779999999999999999988754 1
Q ss_pred -cHHHHhcccccccCCChhHHHHHHH
Q psy8116 266 -TDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 266 -~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+..+..+|+++. ++..+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 219 REETYAEAPDFVVP--ALGDLPRLVR 242 (253)
T ss_dssp SCCTTSCCCSEEES--SGGGHHHHHH
T ss_pred ccCCCCCCCCeeeC--CHHHHHHHHH
Confidence 1122456888876 7888877665
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.08 E-value=6.4e-06 Score=76.36 Aligned_cols=107 Identities=16% Similarity=0.015 Sum_probs=73.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.+.++.|++.|+++.++|+... .+....+.+|+.. .+- ++.+.+.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~---~f~~~~~~~~~------------------------ 133 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAA---YFTEVVTSSSG------------------------ 133 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGG---GEEEEECGGGC------------------------
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHh---heeeeeecccc------------------------
Confidence 4789999999999999999999999864 5677778888732 111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
..+..|..+++.++++ ++.. .++++||+.||++|++.||+++++.+.+ ...+++.+
T Consensus 134 ----~~~kp~~~~~~~~~~~-~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~-~~~~~~l~ 189 (190)
T 2fi1_A 134 ----FKRKPNPESMLYLREK-YQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI-VNLRQVLD 189 (190)
T ss_dssp ----CCCTTSCHHHHHHHHH-TTCS--SEEEEESSHHHHHHHHHTTCEEEECSCH-HHHHHHHT
T ss_pred ----CCCCCCHHHHHHHHHH-cCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCC-CChhhccC
Confidence 0122345566666666 3444 6677799999999999999999887444 44455443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.9e-06 Score=90.33 Aligned_cols=116 Identities=21% Similarity=0.235 Sum_probs=72.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--CCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILK--PGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~--~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
++.|++.+.|+.|+++|++|+++||.....++.+|.++|+.. +.+.++.. .+. .+.++... ......
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~---~l~---~~~dG~~t----g~~~~~- 289 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGL---RLM---KDDEGKIL----PKFDKD- 289 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEE---CEE---ECTTCCEE----EEECTT-
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEe---EEE---EecCCcee----eeecCc-
Confidence 378999999999999999999999999999999999998732 22233221 110 00010000 000000
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhc-CCeeeeeC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKK-ADVGFAMG 262 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~-A~vGiamg 262 (591)
. .-+..+.|...++.++... ...+. ++++|||.||.+||+. +|.++++.
T Consensus 290 ~--p~~~~~gK~~~i~~~~~~~-~~~~~-i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 290 F--PISIREGKVQTINKLIKND-RNYGP-IMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp S--CCCSTHHHHHHHHHHTCCT-TEECC-SEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred c--ceeCCCchHHHHHHHHHhc-CCCCc-EEEEECCHhHHHHHhcCccCceEEE
Confidence 0 0123568999988764331 22233 5555999999999996 55555543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=79.61 Aligned_cols=156 Identities=14% Similarity=0.111 Sum_probs=94.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCCCCCCceEEecchhhHH-------------------
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVT---GDNINTARSIATKCGILKPGDDFLILEGKEFNR------------------- 188 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~------------------- 188 (591)
+++.+++.++|++++++|++++++| |+.........+++|+....+.++..+|.....
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLK 111 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHHHHHHHhCCCCeEEEEcCHHHH
Confidence 5677899999999999999999999 999999988899999854333444433321110
Q ss_pred -hhhccc----------------c----hhhHHHHhhhcCcceEEE------------------------------e---
Q psy8116 189 -RVRDAN----------------G----DVQQHLLDKVWPRLRVLA------------------------------R--- 214 (591)
Q Consensus 189 -~~~~~~----------------~----~~~~~~l~~~~~~~~v~~------------------------------r--- 214 (591)
...... . ....+.+..+.....+++ .
T Consensus 112 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 191 (271)
T 1vjr_A 112 KVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDL 191 (271)
T ss_dssp HHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSE
T ss_pred HHHHHcCCccCCCCCCEEEEeCCCCcCHHHHHHHHHHHHCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcc
Confidence 000000 0 000111111100000000 0
Q ss_pred cChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeeeeCCCc---cHHHHh---cccccccCCChhHHHH
Q psy8116 215 SSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFAMGIAG---TDVAKE---ASDIILTDDNFSSIVK 287 (591)
Q Consensus 215 ~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGiamg~~~---~~~ak~---aad~vl~~~~~~~i~~ 287 (591)
.....|..+++.+++.+ +...+.++++||+ .||+.|++.||+++++-..+ .+.... .+|+++. ++..+.+
T Consensus 192 ~~~kpk~~~~~~~~~~l-gi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~--~l~el~~ 268 (271)
T 1vjr_A 192 IAGKPNPLVVDVISEKF-GVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAK 268 (271)
T ss_dssp ECSTTSTHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHH
T ss_pred cCCCCCHHHHHHHHHHh-CCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHH
Confidence 01234778888888874 5556667777999 59999999999988763222 222232 5788876 6776665
Q ss_pred HH
Q psy8116 288 AV 289 (591)
Q Consensus 288 ~i 289 (591)
++
T Consensus 269 ~l 270 (271)
T 1vjr_A 269 AV 270 (271)
T ss_dssp HH
T ss_pred Hh
Confidence 43
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.6e-05 Score=76.44 Aligned_cols=154 Identities=10% Similarity=0.099 Sum_probs=92.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhccc---------------
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVT---GDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDAN--------------- 194 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~--------------- 194 (591)
+.+++.++++.+++.|+++.++| |+..........++|+..+....+..++. .........
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 111 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPA-ACQILKERGLRPYLLIHDGVRSEF 111 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHHH-HHHHHHHHTCCEEEECCGGGGGGG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHHH-HHHHHHHcCCEEEEEeCHHHHHHH
Confidence 66888999999999999999999 99999999888888885433333222222 111000000
Q ss_pred ----------------ch-----hhHHHHhhhcC--cceE-EE-------e------------------------cChhh
Q psy8116 195 ----------------GD-----VQQHLLDKVWP--RLRV-LA-------R------------------------SSPTD 219 (591)
Q Consensus 195 ----------------~~-----~~~~~l~~~~~--~~~v-~~-------r------------------------~sp~~ 219 (591)
.. ...+.+..+.. ...+ .. . .....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 191 (271)
T 2x4d_A 112 DQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKP 191 (271)
T ss_dssp TTSCCSSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCEEEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTT
T ss_pred HHcCCCCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeEEEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCC
Confidence 00 00111111000 0000 00 0 01246
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeeeCCCc---cHH-HH--hcccccccCCChhHHHHHHH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAMGIAG---TDV-AK--EASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiamg~~~---~~~-ak--~aad~vl~~~~~~~i~~~i~ 290 (591)
|..+++.+++++ +...+.++++||+. ||++|++.||+++++-..+ .+. .+ ..+|+++. ++..+.+.+.
T Consensus 192 k~~~~~~~~~~l-gi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 266 (271)
T 2x4d_A 192 SPEFFKSALQAI-GVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVD--NLAEAVDLLL 266 (271)
T ss_dssp CHHHHHHHHHHH-TCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHHHHHh-CCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeC--CHHHHHHHHH
Confidence 788899888874 55566677779998 9999999999987753232 121 11 23788876 6777766553
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.03 E-value=4.8e-06 Score=78.33 Aligned_cols=123 Identities=13% Similarity=0.137 Sum_probs=83.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...-+. ++.+.+..
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~----------------------- 125 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFSAESVK----------------------- 125 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT-----------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEehhhcC-----------------------
Confidence 357799999 9999999 99999999999999999999998432111 11121100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC---CccHHHHhcccccccCCChhHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI---AGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~---~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.+..|..+++.+++.+ + .+.++++||+.||+.|.+.||+++++-. +..+..+..+|+++. ++..+.+
T Consensus 126 -----~~Kp~~~~~~~~~~~~-~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~ 195 (201)
T 2w43_A 126 -----EYKPSPKVYKYFLDSI-G--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYE 195 (201)
T ss_dssp -----CCTTCHHHHHHHHHHH-T--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHH
T ss_pred -----CCCCCHHHHHHHHHhc-C--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHH
Confidence 0112355566666653 4 4556677999999999999999977621 222222456888876 6777776
Q ss_pred HHH
Q psy8116 288 AVM 290 (591)
Q Consensus 288 ~i~ 290 (591)
.+.
T Consensus 196 ~l~ 198 (201)
T 2w43_A 196 WIL 198 (201)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.1e-05 Score=75.41 Aligned_cols=121 Identities=13% Similarity=0.050 Sum_probs=83.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|+ .|+++.++|+.....+....+.+|+...-+.
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 156 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR--------------------------------- 156 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC---------------------------------
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce---------------------------------
Confidence 357899999999999 9999999999998888888888887421111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeeeCCCccH--------HHHhcccc-cccCC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAMGIAGTD--------VAKEASDI-ILTDD 280 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiamg~~~~~--------~ak~aad~-vl~~~ 280 (591)
+++...| +..+++.+++. ++...+.++++||+. ||+.|.+.||+++++-..+.. .....+|+ ++.
T Consensus 157 i~~~~kp--~~~~~~~~~~~-l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~-- 231 (251)
T 2pke_A 157 IEVVSEK--DPQTYARVLSE-FDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP-- 231 (251)
T ss_dssp EEEESCC--SHHHHHHHHHH-HTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--
T ss_pred eeeeCCC--CHHHHHHHHHH-hCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--
Confidence 1111122 34556666666 455556777779999 999999999999775423321 11245776 666
Q ss_pred ChhHHHHHHH
Q psy8116 281 NFSSIVKAVM 290 (591)
Q Consensus 281 ~~~~i~~~i~ 290 (591)
++..+..++.
T Consensus 232 ~~~el~~~l~ 241 (251)
T 2pke_A 232 DPSGWPAAVR 241 (251)
T ss_dssp SGGGHHHHHH
T ss_pred CHHHHHHHHH
Confidence 7777776664
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.00 E-value=6e-06 Score=81.68 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=42.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCCCCCCceEEecc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVT---GDNINTARSIATKCGILKPGDDFLILEG 183 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i~l~g 183 (591)
.+ |++.++|++++++|++|+++| |+.........+++|+..+.+.++..+|
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~ 75 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATM 75 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHH
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHH
Confidence 45 899999999999999999999 8888888888999998655444554444
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=74.23 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=69.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDN-INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
-++.|++.++|+.|+++|+++.++||+. ...+..+.+.+|+.. .+-.+
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~---~f~~~---------------------------- 115 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR---YFVHR---------------------------- 115 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT---TEEEE----------------------------
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh---hccee----------------------------
Confidence 3688999999999999999999999999 799999999999842 11100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
+ ..+..|...++.+++. ++...+.++++||+.+|+.+.+.||+...
T Consensus 116 --~--~~~~~k~~~~~~~~~~-~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 116 --E--IYPGSKITHFERLQQK-TGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp --E--ESSSCHHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred --E--EEeCchHHHHHHHHHH-cCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 0 0122345556655555 34555667788999999999999997543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.95 E-value=6.8e-06 Score=81.10 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=86.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+...-+.. +.+.+..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~--~~~~~~~------------------------ 158 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFV--LTSEAAG------------------------ 158 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCE--EEHHHHS------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEE--EeecccC------------------------
Confidence 4679999999999999999999998765 467888888884321211 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeeeCCCccHH-----HHhcccccccCCChhHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAMGIAGTDV-----AKEASDIILTDDNFSSI 285 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiamg~~~~~~-----ak~aad~vl~~~~~~~i 285 (591)
....+..+++.+++. ++...+.++++||+. ||+.|.+.||+++++.+.+... ....+|+++. ++..+
T Consensus 159 ----~~Kp~~~~~~~~~~~-~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el 231 (263)
T 3k1z_A 159 ----WPKPDPRIFQEALRL-AHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHL 231 (263)
T ss_dssp ----SCTTSHHHHHHHHHH-HTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGH
T ss_pred ----CCCCCHHHHHHHHHH-cCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHH
Confidence 112234455555555 355566777889997 9999999999999987554321 2236899987 78888
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+++.
T Consensus 232 ~~~l~ 236 (263)
T 3k1z_A 232 LPALD 236 (263)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87776
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.86 E-value=4e-06 Score=80.51 Aligned_cols=137 Identities=16% Similarity=0.078 Sum_probs=82.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNI---------------NTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG 195 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~ 195 (591)
.++.|++.++|+.|+++|+++.++|+... ..+..+.+++|+.- ...+.+..+.. +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~~~~---------g 124 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV-DMVLACAYHEA---------G 124 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC-SEEEEECCCTT---------C
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce-eeEEEeecCCC---------C
Confidence 46889999999999999999999999987 67778888888731 11112221110 0
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee-e-e--CCCccHHHHh
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF-A-M--GIAGTDVAKE 271 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi-a-m--g~~~~~~ak~ 271 (591)
... ..... + .....|..+++.+++. ++...+.++++||+.||+.+.+.|++.. . + |....+....
T Consensus 125 ~~~-----~~~~~--~---~~~KP~~~~~~~~~~~-~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~ 193 (218)
T 2o2x_A 125 VGP-----LAIPD--H---PMRKPNPGMLVEAGKR-LALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAI 193 (218)
T ss_dssp CST-----TCCSS--C---TTSTTSCHHHHHHHHH-HTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEE
T ss_pred cee-----ecccC--C---ccCCCCHHHHHHHHHH-cCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccC
Confidence 000 00000 0 0122344556666665 3555566778899999999999999754 3 2 2211122223
Q ss_pred cccccccCCChhHHHHHHH
Q psy8116 272 ASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 272 aad~vl~~~~~~~i~~~i~ 290 (591)
.+|+++. ++..+.+++.
T Consensus 194 ~~~~~i~--~l~el~~~l~ 210 (218)
T 2o2x_A 194 RPLRDSS--ELGDLLAAIE 210 (218)
T ss_dssp EEESSHH--HHHHHHHHHH
T ss_pred CCCEecc--cHHHHHHHHH
Confidence 5676665 5666655543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.82 E-value=5.2e-05 Score=71.87 Aligned_cols=126 Identities=16% Similarity=0.146 Sum_probs=82.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+...-+. ++.+.+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~--~~~~~~~~------------------------ 137 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--MVFGDQVK------------------------ 137 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECGGGSS------------------------
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccc--cccccccC------------------------
Confidence 5679999999999999999999999999999999999998532111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee----eeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG----FAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG----iamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
. +..+..+.+..++. ++...+.+++|||+.+|+.+-++||+. +.-|.+..+..+++.+..+. +.+.+++
T Consensus 138 --~--~KP~p~~~~~a~~~-lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~ 210 (216)
T 3kbb_A 138 --N--GKPDPEIYLLVLER-LNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILN 210 (216)
T ss_dssp --S--CTTSTHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHH
T ss_pred --C--CcccHHHHHHHHHh-hCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHH
Confidence 0 11122344444454 455666778889999999999999974 33343444554555444444 3455665
Q ss_pred HHH
Q psy8116 288 AVM 290 (591)
Q Consensus 288 ~i~ 290 (591)
.+.
T Consensus 211 ~l~ 213 (216)
T 3kbb_A 211 VLK 213 (216)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.76 E-value=7.4e-05 Score=69.83 Aligned_cols=133 Identities=11% Similarity=0.150 Sum_probs=86.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNI---NTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVW 206 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~---~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~ 206 (591)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+.. .+- ++.+.+....
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~---~fd~i~~~~~~~~~----------------- 92 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID---YFDFIYASNSELQP----------------- 92 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG---GEEEEEECCTTSST-----------------
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh---heEEEEEccccccc-----------------
Confidence 36889999999999999999999998876 88889999999842 211 1111110000
Q ss_pred CcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeee-eCCCccH-----HHH-hccccccc
Q psy8116 207 PRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFA-MGIAGTD-----VAK-EASDIILT 278 (591)
Q Consensus 207 ~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGia-mg~~~~~-----~ak-~aad~vl~ 278 (591)
. .....+..+.+.+++. ++...+.+++|||+ .+|+.+-+.||+... +. .+.. ... ..+|.++.
T Consensus 93 ---~----~~~KP~p~~~~~~~~~-~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~v~~ 163 (189)
T 3ib6_A 93 ---G----KMEKPDKTIFDFTLNA-LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQ-NPEVCLQDERLPLVAPPFVIP 163 (189)
T ss_dssp ---T----CCCTTSHHHHHHHHHH-HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEEC-CTTTCBCSSCCCBCSSSCEEE
T ss_pred ---c----CCCCcCHHHHHHHHHH-cCCCcccEEEECCCcHHHHHHHHHCCCeEEEEC-CccccccccccccCCCcceec
Confidence 0 0011223444444444 35566778888999 799999999998643 33 2211 111 26788887
Q ss_pred CCChhHHHHHHHHH
Q psy8116 279 DDNFSSIVKAVMWG 292 (591)
Q Consensus 279 ~~~~~~i~~~i~~g 292 (591)
+.++..+.+++.-.
T Consensus 164 ~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 164 VWDLADVPEALLLL 177 (189)
T ss_dssp ESSGGGHHHHHHHH
T ss_pred cccHHhHHHHHHHH
Confidence 67788888777643
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.75 E-value=4.7e-05 Score=73.28 Aligned_cols=60 Identities=15% Similarity=0.139 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeee---eCCCccHHHH---hccccccc
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFA---MGIAGTDVAK---EASDIILT 278 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGia---mg~~~~~~ak---~aad~vl~ 278 (591)
..|..+++.+++++ +...+.++++||+ .||++|++.||++++ +|+...+..+ ..+|+++.
T Consensus 176 kpk~~~~~~~~~~l-gi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 176 KPSPWIIRAALNKM-QAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp TTSTHHHHHHHHHH-TCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred CCCHHHHHHHHHHc-CCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 46788888888874 5555667777999 799999999998844 5543333333 36888876
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.74 E-value=4.1e-05 Score=71.55 Aligned_cols=104 Identities=11% Similarity=0.061 Sum_probs=72.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+...-+..+ .+.+..
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~--~~~~~~------------------------ 138 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFF--TSSALG------------------------ 138 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEE--EHHHHS------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEE--eecccC------------------------
Confidence 47899999999999999 999999999999999999999843222211 111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD 267 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~ 267 (591)
...| +..+++.+++. ++...+.++++||+.||+.|.+.||+.+++-..+..
T Consensus 139 --~~Kp--~~~~~~~~~~~-~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 139 --VMKP--NPAMYRLGLTL-AQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp --CCTT--CHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred --CCCC--CHHHHHHHHHH-cCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 0112 23345555555 345556677789999999999999999887644433
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.70 E-value=1.5e-05 Score=75.15 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=70.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK------CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~------~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...-+. ++.+.+.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~--~~~~~~~------------------- 146 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDK--VYASCQM------------------- 146 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSE--EEEHHHH-------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCe--EEeeccc-------------------
Confidence 467899999999999 999999999988887777766 565321111 1111110
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCcc
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGT 266 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~ 266 (591)
.....+..+++.+++. ++...+.++++||+.||+.|.+.||+++++.+.+.
T Consensus 147 ---------~~~Kp~~~~~~~~~~~-~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 147 ---------GKYKPNEDIFLEMIAD-SGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp ---------TCCTTSHHHHHHHHHH-HCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred ---------CCCCCCHHHHHHHHHH-hCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 0011223455555555 35555677778999999999999999999885543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.65 E-value=5.4e-05 Score=72.20 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=79.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++. +++.++|+.... .+.+|+...-+. ++.+.+.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~--~~~~~~~------------------------- 151 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAF--ALCAEDL------------------------- 151 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSE--EEEHHHH-------------------------
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeee--eEEcccc-------------------------
Confidence 5789999999999998 999999987654 234454221111 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeee---CCCccHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAM---GIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiam---g~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.....|..+++.+++. ++...+.++++||+. ||+.|.+.||+++++ |....+. +..+|+++. ++..+.+
T Consensus 152 ---~~~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~ 224 (230)
T 3vay_A 152 ---GIGKPDPAPFLEALRR-AKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPE 224 (230)
T ss_dssp ---TCCTTSHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHH
T ss_pred ---CCCCcCHHHHHHHHHH-hCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHH
Confidence 0123345677777776 455566677789997 999999999998876 2222222 567888888 7888887
Q ss_pred HHH
Q psy8116 288 AVM 290 (591)
Q Consensus 288 ~i~ 290 (591)
++.
T Consensus 225 ~l~ 227 (230)
T 3vay_A 225 VLA 227 (230)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00031 Score=68.42 Aligned_cols=50 Identities=20% Similarity=0.310 Sum_probs=36.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCCCCCCceE
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVT---GDNINTARSIATKCGILKPGDDFL 179 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i 179 (591)
.++.-+++.++++.+++.|+++.++| |+..........++|+..+.+..+
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~ 73 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIF 73 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHee
Confidence 34555788999999999999999999 666666766677788754433443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.51 E-value=5.4e-05 Score=66.04 Aligned_cols=98 Identities=9% Similarity=0.046 Sum_probs=66.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-+.. +.+.+..
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i--~~~~~~~------------------------ 71 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKV--LLSGELG------------------------ 71 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEE--EEHHHHS------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEE--EEeccCC------------------------
Confidence 36688999999999999999999999988888888888874321211 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
...| +..+.+.+++. ++...+.++++||+.+|+.+.+.+++...
T Consensus 72 --~~Kp--~~~~~~~~~~~-~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 72 --VEKP--EEAAFQAAADA-IDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp --CCTT--SHHHHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred --CCCC--CHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 0111 22334444444 45555677788999999999999997543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00024 Score=69.99 Aligned_cols=125 Identities=11% Similarity=0.126 Sum_probs=83.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+...-+. + +.+.+..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~-i-~~~~~~~------------------------ 173 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA-I-VIGGEQK------------------------ 173 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE-E-EEGGGSS------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe-E-EecCCCC------------------------
Confidence 678999999999997 699999999999999999999998432111 1 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCe--eeeeCCCccH--HHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADV--GFAMGIAGTD--VAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~v--Giamg~~~~~--~ak~aad~vl~~~~~~~i~ 286 (591)
.+..+..+.+.+++. ++...+.++++||+ .||+.+-+.||+ .+.++..... .....+|+++. ++..+.
T Consensus 174 ----~~KP~p~~~~~~~~~-~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~ 246 (260)
T 2gfh_A 174 ----EEKPAPSIFYHCCDL-LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELP 246 (260)
T ss_dssp ----SCTTCHHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHH
T ss_pred ----CCCCCHHHHHHHHHH-cCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHH
Confidence 011123445555554 35556677888995 999999999999 5777632221 12345788776 677776
Q ss_pred HHHH
Q psy8116 287 KAVM 290 (591)
Q Consensus 287 ~~i~ 290 (591)
+++.
T Consensus 247 ~~l~ 250 (260)
T 2gfh_A 247 ALLQ 250 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00035 Score=70.45 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCeeeee---CCCccHHHH---------hcccccccCCChhHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVGFAM---GIAGTDVAK---------EASDIILTDDNFSSI 285 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vGiam---g~~~~~~ak---------~aad~vl~~~~~~~i 285 (591)
.|..+++.+++. ++...+.++++||+. ||+.|.+.||+..++ |....+..+ ..+|+++. ++..+
T Consensus 216 P~~~~~~~~~~~-lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el 292 (306)
T 2oyc_A 216 PSPYMFECITEN-FSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADL 292 (306)
T ss_dssp TSTHHHHHHHHH-SCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGG
T ss_pred CCHHHHHHHHHH-cCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHH
Confidence 456677877777 455667788889996 999999999988765 322222222 35788887 77777
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+.+.
T Consensus 293 ~~~l~ 297 (306)
T 2oyc_A 293 TEGLE 297 (306)
T ss_dssp GGGC-
T ss_pred HHHHH
Confidence 77665
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.31 E-value=2.6e-05 Score=73.21 Aligned_cols=106 Identities=14% Similarity=0.171 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK-CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|++.|+++.++|+.....+..+... .|+...-+. ++.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~--~~~~~~~------------------------ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADH--IYLSQDL------------------------ 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSE--EEEHHHH------------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheee--EEEeccc------------------------
Confidence 4679999999999999999999999765443322222 222100000 0111000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV 268 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ 268 (591)
....| +..+++.+++. ++...+.++++||+.||+.|.+.||+..++.+.+.+.
T Consensus 145 --~~~Kp--~~~~~~~~~~~-~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 145 --GMRKP--EARIYQHVLQA-EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp --TCCTT--CHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred --CCCCC--CHHHHHHHHHH-cCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 00112 22344455555 3555567777899999999999999998887555443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00015 Score=69.40 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=69.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK------CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~------~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
++.|++.++++.|++. +++.++|+.....+..+.+. .|+...-+. ++.+.+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~--i~~~~~~------------------- 169 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK--TYLSYEM------------------- 169 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE--EEEHHHH-------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE--EEeeccc-------------------
Confidence 4679999999999999 99999999998888766633 444210010 1111100
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD 267 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~ 267 (591)
..+..+..+++.+++. ++...+.++++||+.||+.|.+.||++.++.+.+.+
T Consensus 170 ---------~~~KP~~~~~~~~~~~-~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 170 ---------KMAKPEPEIFKAVTED-AGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp ---------TCCTTCHHHHHHHHHH-HTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred ---------CCCCCCHHHHHHHHHH-cCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 0111233555666665 355566777789999999999999999988855433
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00069 Score=63.78 Aligned_cols=121 Identities=7% Similarity=0.074 Sum_probs=73.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++||.....+..+.. .. -+.+++-+ +.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~~~--~~------------------------- 83 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIAAP--RP------------------------- 83 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEECC--CC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEECC--cC-------------------------
Confidence 578999999999999999999999998877754443 10 11111111 00
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCcEEEEECCCCCCHHhhhcCCe-eeeeCCCcc-----------------------
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSD-SREVVAVTGDGTNDGPALKKADV-GFAMGIAGT----------------------- 266 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~-~~~~va~iGDg~ND~~mLk~A~v-Giamg~~~~----------------------- 266 (591)
.+..| +..++...++. +.. ..+.+++|||+.+|+.+-++|++ +|++.....
T Consensus 84 -~~~KP--~p~~~~~a~~~-l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~ 159 (196)
T 2oda_A 84 -TAGWP--QPDACWMALMA-LNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQ 159 (196)
T ss_dssp -SSCTT--STHHHHHHHHH-TTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHH
T ss_pred -CCCCC--ChHHHHHHHHH-cCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHH
Confidence 00112 12233333333 343 33567788999999999999996 344431111
Q ss_pred ---HHHHhcccccccCCChhHHHHHHH
Q psy8116 267 ---DVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 267 ---~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
+.....+|+++. ++..+..++.
T Consensus 160 ~~~~l~~~~~d~vi~--~~~eL~~~l~ 184 (196)
T 2oda_A 160 ATLKLYSLGVHSVID--HLGELESCLA 184 (196)
T ss_dssp HHHHHHHTTCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHcCCCEEeC--CHHHHHHHHH
Confidence 111235788886 7888877664
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0011 Score=69.20 Aligned_cols=138 Identities=14% Similarity=0.218 Sum_probs=82.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-+...++.+.+.... ....+....
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-------------~~~~~~~kp 281 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-------------ENMYPQARP 281 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-------------HHHSTTSCC
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-------------ccccccccC
Confidence 5778999999999999999999999999999999999998542220012333332110 000000000
Q ss_pred EEecChhhHHHHHHHHHHhhcC--------------CCCcEEEEECCCCCCHHhhhcCCee-eeeC--CCc---c-HHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVS--------------DSREVVAVTGDGTNDGPALKKADVG-FAMG--IAG---T-DVAK 270 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~--------------~~~~~va~iGDg~ND~~mLk~A~vG-iamg--~~~---~-~~ak 270 (591)
..+..|+ +....++. ++ ...+.++++||+.+|+.+-++||+. |++. ..+ . +...
T Consensus 282 ~~KP~P~----~~~~a~~~-lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~ 356 (384)
T 1qyi_A 282 LGKPNPF----SYIAALYG-NNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEA 356 (384)
T ss_dssp CCTTSTH----HHHHHHHC-CCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHH
T ss_pred CCCCCHH----HHHHHHHH-cCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhh
Confidence 0111221 11222222 22 3456778889999999999999965 3333 111 1 2223
Q ss_pred hcccccccCCChhHHHHHH
Q psy8116 271 EASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 271 ~aad~vl~~~~~~~i~~~i 289 (591)
..||+++. ++..+...+
T Consensus 357 ~~ad~vi~--sl~eL~~~l 373 (384)
T 1qyi_A 357 HHADYVIN--HLGELRGVL 373 (384)
T ss_dssp TTCSEEES--SGGGHHHHH
T ss_pred cCCCEEEC--CHHHHHHHH
Confidence 46888887 677777655
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00078 Score=65.64 Aligned_cols=117 Identities=10% Similarity=0.194 Sum_probs=75.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-+. ++.+.+...
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i~~~~~~~~---------------------- 168 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--IADAGKCKN---------------------- 168 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--ECCGGGCCS----------------------
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--eecccccCC----------------------
Confidence 4578999999999999999999888764 45677888998532211 122211100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeCCCccHHHHhcccccccCCChhHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMGIAGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg~~~~~~ak~aad~vl~~~~~~~i 285 (591)
.+..| .+....++. ++...+.++++||+.+|+.+-++||+ .|++++ ..+ ...||+++. +++.+
T Consensus 169 --~KP~p----~~~~~a~~~-lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~-~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 169 --NKPHP----EIFLMSAKG-LNVNPQNCIGIEDASAGIDAINSANMFSVGVGN-YEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp --CTTSS----HHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESC-TTT--TTTSSEEES--SGGGC
T ss_pred --CCCcH----HHHHHHHHH-hCCChHHeEEECCCHHHHHHHHHcCCEEEEECC-hhH--hccCCEEEC--ChHhC
Confidence 11222 233333343 45556677888999999999999997 566652 222 246899887 55554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.00023 Score=65.85 Aligned_cols=103 Identities=21% Similarity=0.209 Sum_probs=63.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccch
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGD---------------NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGD 196 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~ 196 (591)
++.|++.++|+.|+++|+++.++|+. ....+..+.+.+|+. -..+...+..... ..+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~----~~~- 113 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPAD----ECD- 113 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGG----CCS-
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcc----ccc-
Confidence 57899999999999999999999998 466777888888883 1112222100000 000
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeC
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMG 262 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg 262 (591)
...| +..+++.+++. +....+.+++|||+.+|+.+-+.|++. +.+.
T Consensus 114 -----------------~~KP--~p~~~~~~~~~-~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 114 -----------------CRKP--KVKLVERYLAE-QAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp -----------------SSTT--SCGGGGGGC-----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -----------------ccCC--CHHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 0001 11222222222 234456677889999999999999986 4444
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0028 Score=60.06 Aligned_cols=94 Identities=13% Similarity=0.112 Sum_probs=60.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+... .+..+.+.+|+...-+. ++.+.+..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 147 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDA--LALSYEIK------------------------ 147 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSE--EC------------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeE--EEeccccC------------------------
Confidence 5779999999999999999999999866 47788888888421111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC-CHHhhhcCCeeee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN-DGPALKKADVGFA 260 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N-D~~mLk~A~vGia 260 (591)
..+..| .+.+.+++.+ +... +++||+.+ |+.+.+.||+...
T Consensus 148 ~~Kp~~----~~~~~~~~~~-~~~~---~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 148 AVKPNP----KIFGFALAKV-GYPA---VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp -----C----CHHHHHHHHH-CSSE---EEEESSCCCCCCCSSSCSEEEE
T ss_pred CCCCCH----HHHHHHHHHc-CCCe---EEEcCCchHhHHHHHHCCCeEE
Confidence 011122 2333333332 3222 88899999 9999999998754
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0017 Score=63.78 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=62.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNI----NTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~----~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
+.++.|++.+.++.|+++|+++.++||++. ..+..-.+++||..-.+..
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~--------------------------- 151 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKT--------------------------- 151 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTT---------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccce---------------------------
Confidence 467889999999999999999999999975 3667777889995321111
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHh
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPA 251 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~m 251 (591)
++.|....+|....+.|.+ ..-..++++||..+|.++
T Consensus 152 -----Lilr~~~~~K~~~r~~L~~----~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 152 -----LLLKKDKSNKSVRFKQVED----MGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp -----EEEESSCSSSHHHHHHHHT----TTCEEEEEEESSGGGGCG
T ss_pred -----eEecCCCCChHHHHHHHHh----cCCCEEEEECCChHHcCc
Confidence 2222223456666666543 235779999999999986
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0012 Score=63.31 Aligned_cols=118 Identities=12% Similarity=0.144 Sum_probs=75.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|+++| ++.++|+.....+..+.+.+|+... + + ..
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~-----------f----------------~----~~- 141 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE-----------V----------------E----GR- 141 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH-----------T----------------T----TC-
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh-----------c----------------C----ee-
Confidence 468899999999999999 9999999998889999988887310 0 0 00
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC---CHHhhhcCCee---eeeCCC--ccHHHHhc--ccccccCC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN---DGPALKKADVG---FAMGIA--GTDVAKEA--SDIILTDD 280 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N---D~~mLk~A~vG---iamg~~--~~~~ak~a--ad~vl~~~ 280 (591)
+.. ...|...++.+.+ +...+.++++||+.| |+.+-+.||+. +.-|.. ..+..++. +|+++.
T Consensus 142 ~~~---~~~K~~~~~~~~~---~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~-- 213 (231)
T 2p11_A 142 VLI---YIHKELMLDQVME---CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE-- 213 (231)
T ss_dssp EEE---ESSGGGCHHHHHH---HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--
T ss_pred EEe---cCChHHHHHHHHh---cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--
Confidence 001 1123334444443 134567888899999 66666778853 333311 22233443 888876
Q ss_pred ChhHHHHHH
Q psy8116 281 NFSSIVKAV 289 (591)
Q Consensus 281 ~~~~i~~~i 289 (591)
++..+.+.+
T Consensus 214 ~~~el~~~l 222 (231)
T 2p11_A 214 RIGDLVEMD 222 (231)
T ss_dssp SGGGGGGCG
T ss_pred CHHHHHHHH
Confidence 566655443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0019 Score=64.72 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=65.6
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH---HHHHHH--------cCCCCCCCceEEecchhhHHhhhcccchh
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA---RSIATK--------CGILKPGDDFLILEGKEFNRRVRDANGDV 197 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta---~~ia~~--------~gi~~~~~~~i~l~g~~~~~~~~~~~~~~ 197 (591)
.++++.|++.++++.|+++|+++.++||+....+ ....+. .|+ + ...++..+.. .
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~-~~~~~~~~~~-~---------- 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--P-LVMQCQREQG-D---------- 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--C-CSEEEECCTT-C----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--C-chheeeccCC-C----------
Confidence 3577899999999999999999999999985533 344445 687 2 2233322211 0
Q ss_pred hHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 198 QQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 198 ~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..|+-|..+++.+ .....+.++++||..+|+.|-++||+.
T Consensus 251 ---------------~kp~p~~~~~~~~~~----~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 ---------------TRKDDVVKEEIFWKH----IAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp ---------------CSCHHHHHHHHHHHH----TTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ---------------CcHHHHHHHHHHHHH----hccccceEEEeCCcHHHHHHHHHcCCe
Confidence 022355666666553 222335567899999999999999975
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0024 Score=62.50 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=36.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCceEE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK----CGILKPGDDFLI 180 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~i~ 180 (591)
.-+++.++++.+++.|+++.++||+...+...++.. +|+..+.+.++.
T Consensus 22 ~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 73 (264)
T 1yv9_A 22 PIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYT 73 (264)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEE
T ss_pred ECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEc
Confidence 336888999999999999999999988777766664 888543333433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.0032 Score=61.79 Aligned_cols=86 Identities=14% Similarity=0.064 Sum_probs=60.8
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNI----NTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~----~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
+.++.|++.+.++.|+++|+++.++||++. ..+..-.+++|+..-.+..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~--------------------------- 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESA--------------------------- 151 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGG---------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccc---------------------------
Confidence 567899999999999999999999999965 4666777789995311111
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHh
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPA 251 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~m 251 (591)
++.|.....|....+.|.+. .-..|+++||..+|.++
T Consensus 152 -----Lilr~~~~~K~~~r~~l~~~----Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 -----FYLKKDKSAKAARFAEIEKQ----GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp -----EEEESSCSCCHHHHHHHHHT----TEEEEEEEESSGGGGCS
T ss_pred -----eeccCCCCChHHHHHHHHhc----CCCEEEEECCChHHhcc
Confidence 12222234566666665432 23579999999999976
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.024 Score=55.36 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=34.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCC
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK---CGIL 172 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~---~gi~ 172 (591)
+-+++.++|++++++|++++++||+...+...++++ +|+.
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 347899999999999999999999998777777665 5774
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.56 E-value=0.012 Score=57.87 Aligned_cols=42 Identities=10% Similarity=0.232 Sum_probs=35.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDN---INTARSIATKCGIL 172 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~---~~ta~~ia~~~gi~ 172 (591)
.++.|++.++|+.|+++|+++.++||+. ...+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 5688999999999999999999999998 44455556778885
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.02 Score=56.14 Aligned_cols=115 Identities=18% Similarity=0.218 Sum_probs=72.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC---GILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~---gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+...-+. ++.+ +..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~--i~~~-~~~-------------------- 185 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--HFDT-KIG-------------------- 185 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE--EECG-GGC--------------------
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE--EEec-CCC--------------------
Confidence 468899999999999999999999999988888777644 35321111 1111 110
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCC--Ccc-HHHHhccccccc
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGI--AGT-DVAKEASDIILT 278 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~--~~~-~~ak~aad~vl~ 278 (591)
.+..| .+.+.+++. ++...+.++++||+.+|+.+-++||+- +.+.. ... +.....+|.++.
T Consensus 186 -----~KP~p----~~~~~~~~~-lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 186 -----HKVES----ESYRKIADS-IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp -----CTTCH----HHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred -----CCCCH----HHHHHHHHH-hCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 11112 333344444 355566788889999999999999974 33421 111 122245666665
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.27 E-value=0.016 Score=59.03 Aligned_cols=128 Identities=18% Similarity=0.159 Sum_probs=74.0
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc----CCCCCCCceEEecchh--------hHHhhhcccchh
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC----GILKPGDDFLILEGKE--------FNRRVRDANGDV 197 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~----gi~~~~~~~i~l~g~~--------~~~~~~~~~~~~ 197 (591)
...+.|+..+.++.++++|++|+++||-+...++.+|..+ ||. .++++...-.. ......-.+++.
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp--~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK--PENVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC--GGGEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC--HHHeEeeeeeeeccccccccccccccccccc
Confidence 3357899999999999999999999999999999999874 553 34444332100 000000000000
Q ss_pred hHHHHhhhcCcceEEEe-----cChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhc--CCeeeeeCCCccH
Q psy8116 198 QQHLLDKVWPRLRVLAR-----SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKK--ADVGFAMGIAGTD 267 (591)
Q Consensus 198 ~~~~l~~~~~~~~v~~r-----~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~--A~vGiamg~~~~~ 267 (591)
.. ..........+ +--+.|...++..+ ...+.-+++.||+. .|.+||+. ++.|+++-.+..+
T Consensus 219 ~~----~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i----~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~ 288 (327)
T 4as2_A 219 DP----KANLDLEVTPYLWTPATWMAGKQAAILTYI----DRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKA 288 (327)
T ss_dssp CG----GGGTTCEEEEEECSSCSSTHHHHHHHHHHT----CSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCH
T ss_pred cc----cccccccccccccccccccCccHHHHHHHH----hhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCC
Confidence 00 00011111111 22457888887743 22344566679994 79999965 4455554434333
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.0097 Score=57.48 Aligned_cols=99 Identities=11% Similarity=0.150 Sum_probs=64.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|+++|+++.++|+.. .+..+.+.+|+...-+ .++.+.+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd--~i~~~~~~~----------------------- 146 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFT--FCADASQLK----------------------- 146 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCS--EECCGGGCS-----------------------
T ss_pred ccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccc--ccccccccc-----------------------
Confidence 3578999999999999999999999865 3566778888853222 122222110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg 262 (591)
+..|. ..+....++. ++...+.++++||+.+|+.+-++||+ .|+++
T Consensus 147 ---~~KP~--p~~~~~a~~~-lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 147 ---NSKPD--PEIFLAACAG-LGVPPQACIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp ---SCTTS--THHHHHHHHH-HTSCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ---CCCCc--HHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 01121 1233344444 45566677788999999999999995 34444
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=93.60 E-value=0.077 Score=46.90 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=33.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCC
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDN---INTARSIATKCGI 171 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~---~~ta~~ia~~~gi 171 (591)
+.|++.++|++++++|++++++|||+ ...+...+.+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45789999999999999999999998 5566677777887
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.02 E-value=0.094 Score=55.13 Aligned_cols=39 Identities=18% Similarity=0.415 Sum_probs=33.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCC------------HHHHHHHHHHcCC
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDN------------INTARSIATKCGI 171 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~------------~~ta~~ia~~~gi 171 (591)
+-|++.++|+.|+++|+++.++|+.. ...+..+.+.+|+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl 138 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV 138 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 67999999999999999999999965 2236677888887
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=92.81 E-value=0.095 Score=56.00 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=59.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC------CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGD------NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd------~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
++.|++.++++.|+++|+++.++|+. .......... |+...-+. ++.+.+..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~--i~~~~~~~------------------ 157 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDF--LIESCQVG------------------ 157 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSE--EEEHHHHT------------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeE--EEeccccC------------------
Confidence 57899999999999999999999996 2222222211 33211111 22222211
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
...| +..+.+.+++. ++...+.++++||+.||+.+.+.||+....-
T Consensus 158 --------~~KP--~p~~~~~~~~~-lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 158 --------MVKP--EPQIYKFLLDT-LKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp --------CCTT--CHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred --------CCCC--CHHHHHHHHHH-cCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 0112 12344444444 3455566777799999999999999876544
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.71 E-value=0.035 Score=52.54 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=25.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
+.+++.+.++.|+++|+++.++|+.....+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~ 118 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKT 118 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence 467899999999999999999999875433
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=87.26 E-value=0.49 Score=45.94 Aligned_cols=92 Identities=11% Similarity=0.118 Sum_probs=58.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc--C---------CCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC--G---------ILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~--g---------i~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
-++.|++.++++. |+++.++|+.+...+..+.+.+ | +...-+.+ ++. ..
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~--f~~-~~------------- 183 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGY--FDI-NT------------- 183 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEE--ECH-HH-------------
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceE--Eee-ec-------------
Confidence 3677888888887 9999999999999888877766 4 21000000 000 00
Q ss_pred HHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 200 HLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
+...|. ..+...+++. ++...+.++++||+.+|+.+-++||+-
T Consensus 184 -------------~g~KP~--p~~~~~a~~~-lg~~p~~~l~vgDs~~di~aA~~aG~~ 226 (253)
T 2g80_A 184 -------------SGKKTE--TQSYANILRD-IGAKASEVLFLSDNPLELDAAAGVGIA 226 (253)
T ss_dssp -------------HCCTTC--HHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred -------------cCCCCC--HHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 001121 2333344444 455556778889999999999999964
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.30 E-value=0.22 Score=46.42 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=63.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+||++.+.++.|++. ++++++|......|..+.+.+|+.. .+- .+.+.+..
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~---~f~~~l~rd~~~----------------------- 120 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWG---VFRARLFRESCV----------------------- 120 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSS---CEEEEECGGGCE-----------------------
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcc---cEEEEEEcccce-----------------------
Confidence 5799999999999998 9999999999999999999999842 221 22222110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
..|...++.+ +. +....+.+++++|+.++..+-+.|++-+.
T Consensus 121 -------~~k~~~lK~L-~~-Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 121 -------FHRGNYVKDL-SR-LGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp -------EETTEEECCG-GG-SSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred -------ecCCceeeeH-hH-hCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 0011111111 11 34445667777999999988777776653
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=84.68 E-value=0.18 Score=46.46 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=37.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.+||++.+.++.+.+. ++++++|......|..+.+.+|..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 5899999999999998 999999999999999999999884
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=82.17 E-value=2.3 Score=38.24 Aligned_cols=26 Identities=12% Similarity=0.247 Sum_probs=23.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGD 157 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd 157 (591)
-++.|++.++++.|++ ++++.++|+.
T Consensus 68 ~~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CCBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 3678999999999998 5999999997
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=80.55 E-value=1 Score=38.46 Aligned_cols=30 Identities=23% Similarity=0.400 Sum_probs=26.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
++.+++.+++++++++|++++++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 567889999999999999999999998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 591 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 9e-41 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-40 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-25 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 9e-20 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 6e-17 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-11 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-10 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 8e-08 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-07 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 9e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 9e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 9e-06 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 1e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 5e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 3e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 3e-04 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 0.004 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 143 bits (362), Expect = 9e-41
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGD 176
I ++ TG DP R EV +I+ C+ AGI V M+TGDN TA +I + GI +
Sbjct: 5 ICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENE 64
Query: 177 DF--LILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSD 234
+ G+EF+ + R AR P+ K +V+ +
Sbjct: 65 EVADRAYTGREFDDL--------PLAEQREACRRACCFARVEPSHKSKIVEYLQ-----S 111
Query: 235 SREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWG 292
E+ A+TGDG ND PALKKA++G AMG +GT VAK AS+++L DDNFS+IV AV G
Sbjct: 112 YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 149 bits (378), Expect = 6e-40
Identities = 53/280 (18%), Positives = 103/280 (36%), Gaps = 34/280 (12%)
Query: 250 PALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTV 309
P A + + + +AK+ + + S+ GR +Y+++ +F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 310 NVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKP 369
NV V+ F+ A L VQ+LWVNL+ D L + AL P D++ R P +P
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 370 LISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGS---------------- 413
LIS + + Y + G G +
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWW--FMYAEDGPGVTYHQLTHFMQCTEDHPHFEG 363
Query: 414 ------EPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQ 467
E + T+ + V + + N +N+ + Q + + N ++ +
Sbjct: 364 LDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN-QSLMRMPPWVNIWLLGSICLSMSLH 422
Query: 468 VFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVV 505
I+ F K+L L QWL L + + +++
Sbjct: 423 FLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEIL 462
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 98.6 bits (245), Expect = 5e-25
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 44/174 (25%)
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPG 175
++ + TG G D ++ A+++ +R GI V M+TGDN +A +I+ + +
Sbjct: 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI 64
Query: 176 DDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDS 235
+ P K VK + +
Sbjct: 65 AEV-------------------------------------LPHQKSEEVKKL------QA 81
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
+EVVA GDG ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 82 KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 89.1 bits (220), Expect = 9e-20
Identities = 29/229 (12%), Positives = 66/229 (28%), Gaps = 34/229 (14%)
Query: 71 VRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIE 130
++ + +A + + + + + D E+ I + E
Sbjct: 169 LKGALWTLAQEVYQEWYLGSKLYE-----------------DVEKKIARTTFKTGYIYQE 211
Query: 131 DPV--RPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR 188
+ EV + + AG + + TG G+L + I +
Sbjct: 212 IILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE 271
Query: 189 RVRDANGDVQQHLLDK-VWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN 247
+ + + Y + I +K + V + GD
Sbjct: 272 AENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK-----DDVFIVGDSLA 326
Query: 248 DGPALKKAD---VGFAMGIAGTDVAKE----ASDIILTDDNFSSIVKAV 289
D + +K +G G+ G D A E +D ++ ++ + +
Sbjct: 327 DLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 78.1 bits (191), Expect = 6e-17
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 26/228 (11%)
Query: 74 VIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPV 133
+++ A + E P+ EE V + +
Sbjct: 24 IMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEI-------TSFVLEDAKI 76
Query: 134 RPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDA 193
R + + I +++G + ++
Sbjct: 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY------- 129
Query: 194 NGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALK 253
+D + K +++ ++S+ + + + GD D A K
Sbjct: 130 ------IHIDWPHSCKGTCSNQCGCCKPSVIH-----ELSEPNQYIIMIGDSVTDVEAAK 178
Query: 254 KADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAK 301
+D+ FA + +E + L +F I K + + V + +
Sbjct: 179 LSDLCFARDY-LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 62.0 bits (149), Expect = 2e-11
Identities = 37/202 (18%), Positives = 66/202 (32%), Gaps = 46/202 (22%)
Query: 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRD 192
+ + +AIR+ + GI + +VTG+ + A + + G P +R+
Sbjct: 20 IHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 79
Query: 193 ANGDVQQHLLDKVWPRL--RVLARSSPTDKYTLVKGIIDSKVSDSREV------------ 238
A+ D + L +++ R + + P + LV V RE+
Sbjct: 80 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVD 139
Query: 239 -------------------------------VAVTGDGTNDGPALKKADVGFAMGIAGTD 267
VA GDG ND A K A+ A
Sbjct: 140 SGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA-PK 198
Query: 268 VAKEASDIILTDDNFSSIVKAV 289
+ KE +D + + +A+
Sbjct: 199 ILKENADYVTKKEYGEGGAEAI 220
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 58.3 bits (140), Expect = 3e-10
Identities = 13/126 (10%), Positives = 33/126 (26%), Gaps = 13/126 (10%)
Query: 15 HFQLSAARALMKVTVIPRKGGGY-----RSLPTKVLPRSCAFIYGRDGNLEKFTREMQDR 69
++ + P ++L R C+ I + +
Sbjct: 95 EISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDR-CSSILVQGKEIPLDKEMQDAF 153
Query: 70 LVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGI 129
+N + G R + + GK + + D+ + L + ++ +
Sbjct: 154 --QNAYLELGGLGERVLGFCQLNLPSGKFPRGF-----KFDTDELNFPTEKLCFVGLMSM 206
Query: 130 EDPVRP 135
D
Sbjct: 207 IDHHHH 212
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 51.1 bits (121), Expect = 8e-08
Identities = 30/203 (14%), Positives = 59/203 (29%), Gaps = 44/203 (21%)
Query: 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKP---GDDFLILEGKEF 186
+ + + ++IR ++ G+TV +++G+ I ++ GI P + ++ +
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 187 NRRVRDANGDVQ-----------QHLLDKVWPRLRVLARSSPTDKYTLVKGIIDS----- 230
++ G + + +L W P D + K
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 231 ------------------------KVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGT 266
S + + V GD ND P + A T
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA-T 196
Query: 267 DVAKEASDIILTDDNFSSIVKAV 289
D K SD + I +
Sbjct: 197 DNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 50.2 bits (119), Expect = 1e-07
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290
V GD ND L +A G A +V +E + + + +
Sbjct: 146 YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFL 197
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 48.0 bits (113), Expect = 9e-07
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 41 PTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIE-PMACDGLRTISIAYRDFVPGKAE 99
P V+ R C ++ T ++++++ + E D LR +++A RD P + E
Sbjct: 158 PEGVIDR-CNYVR-VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE 215
Query: 100 INQVHIDTEPNWDDEEYIVNNLTGLCVVGI 129
+ + +LT + VVG+
Sbjct: 216 M------VLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.8 bits (104), Expect = 9e-06
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 243 GDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
GDG ND KKA + A + KE +DI + + I+K +
Sbjct: 165 GDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYI 209
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 9e-06
Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 20/156 (12%)
Query: 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGK 184
+ + P + + + + Q + V +++G + +A+K I +
Sbjct: 75 LIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA---TNVFANRL 131
Query: 185 EFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244
+F A D Q + V ++ K + ++ GD
Sbjct: 132 KFYFNGEYAGFDETQPTAES--------------GGKGKVIKLLKEKFHFKKIIM--IGD 175
Query: 245 GTNDGPALKKADVGFAMG-IAGTDVAKEASDIILTD 279
G D A AD G K+ + +TD
Sbjct: 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 44.9 bits (105), Expect = 1e-05
Identities = 34/263 (12%), Positives = 79/263 (30%), Gaps = 20/263 (7%)
Query: 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEE 115
DG + + + G++ + + + + ++ + ++
Sbjct: 10 DGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGA 69
Query: 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT------ARSIATKC 169
+ + L + V + K ++ + ++ +A
Sbjct: 70 LVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHY 129
Query: 170 GILKPGDDFLILEGKEFNRRVRDANGDVQQHL--LDKVWPRLRVLARSSPTDKYTLVKGI 227
LKP D+ ++ F + + + + L + S ++ G+
Sbjct: 130 HRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGL 189
Query: 228 IDSKVSDSR--------EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTD 279
+ + V GD ND LK A FAMG A + K+ + D
Sbjct: 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDD 248
Query: 280 DNFSSIVKAVMWGRNVYDSIAKF 302
+N + + + V D+ F
Sbjct: 249 NNHEGALNVI---QAVLDNTYPF 268
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 43.4 bits (101), Expect = 4e-05
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
E AV GD ND L+ A G AMG A + K +D + ++ + +
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTNDEHGVAHMM 281
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 43.1 bits (100), Expect = 5e-05
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 237 EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290
+ V V GD ND L FA+ A TD AK + +L + V ++
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSHREGAVAYLL 276
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
E + GD ND ++ A VG A+ A KE ++ + + + A+
Sbjct: 213 PEEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNLEDGVAFAI 265
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.4 bits (96), Expect = 1e-04
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278
K + II E ++ GDG ND L+ A +G AMG A + K A+D +
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSF-GDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTA 243
Query: 279 DDNFSSIVKAV 289
+ I KA+
Sbjct: 244 PIDEDGISKAM 254
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 236 REVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289
+E + V GD ND ++A + AM A + KEASDI+ +N S + +
Sbjct: 206 KEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNNDSGVSYVL 258
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 20/81 (24%), Positives = 28/81 (34%)
Query: 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA 255
+V KV R +DK K ++D + GD ND P +
Sbjct: 156 EVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVV 215
Query: 256 DVGFAMGIAGTDVAKEASDII 276
D F +G A+ S II
Sbjct: 216 DKVFIVGSLKHKKAQNVSSII 236
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 36.2 bits (83), Expect = 0.004
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 239 VAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278
A GD + D PA FA+ A K A D +L+
Sbjct: 99 TAYIGDDSVDLPAFAACGTSFAVADA-PIYVKNAVDHVLS 137
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 591 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.95 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.87 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.84 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.74 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.58 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.57 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.54 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.52 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.49 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.46 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.43 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.42 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.31 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.25 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.24 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.18 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.07 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.04 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.0 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.89 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.87 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.61 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.45 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.9 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.78 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.77 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.76 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.74 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.59 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.52 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.33 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.31 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.29 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.2 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.12 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.92 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.79 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.71 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.71 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.71 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.55 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.26 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.83 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.7 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.54 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.48 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.39 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.21 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 93.7 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 92.76 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 92.47 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.14 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 91.58 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=2.5e-30 Score=238.42 Aligned_cols=148 Identities=45% Similarity=0.669 Sum_probs=129.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCce--EEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDF--LILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~--i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
||+|++++++|+.|+++||+++|+|||+..||.++|+++||..++... ..+.|.++... ......+...+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~~ 90 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL--------PLAEQREACRR 90 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS--------CHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh--------hHHHHhhhhhh
Confidence 999999999999999999999999999999999999999998765432 24567666543 22333445566
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHH
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
..+|+|++|++|..+++.+ +..+++|+|+|||.||++||++||+||||+ ++++.++++||+++.+++|..+.++
T Consensus 91 ~~v~ar~~p~~K~~lv~~l-----~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~ 164 (168)
T d1wpga2 91 ACCFARVEPSHKSKIVEYL-----QSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA 164 (168)
T ss_dssp CCEEESCCHHHHHHHHHHH-----HHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH
T ss_pred hhhhhccchhHHHHHHHHH-----HhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH
Confidence 7899999999999999995 556899999999999999999999999999 8999999999999999999999999
Q ss_pred HHHH
Q psy8116 289 VMWG 292 (591)
Q Consensus 289 i~~g 292 (591)
|+||
T Consensus 165 I~~G 168 (168)
T d1wpga2 165 VEEG 168 (168)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9998
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=1.2e-27 Score=257.21 Aligned_cols=224 Identities=22% Similarity=0.317 Sum_probs=188.3
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCC
Q psy8116 288 AVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR 366 (591)
Q Consensus 288 ~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~ 366 (591)
+++ .||..|.|++|+++|+++.|+..++..+++.++..+.|+++.|+||+|+++|++|+++|+.|||++++|++||+++
T Consensus 223 avE~~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~ 302 (472)
T d1wpga4 223 SVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSP 302 (472)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCT
T ss_pred HHHHHHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCC
Confidence 445 5999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC-------------C-CCC------CCCCcchhhhHHHHH
Q psy8116 367 TKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGR-------------G-AEF------GSEPTQHFTVIFNTF 426 (591)
Q Consensus 367 ~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~------~~~~~~~~t~~f~~~ 426 (591)
+++++++.++.+++.++++.++..+..+++...+.....+. + ... ......++|++|+++
T Consensus 303 ~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~l 382 (472)
T d1wpga4 303 KEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVL 382 (472)
T ss_dssp TCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHH
Confidence 99999999999999999998877766665543322111000 0 000 001234679999999
Q ss_pred HHHHHhhhhhhccccCccccc-ccCccCHHHHHHHHHHHHHHHHHHhh--ccccccccCCChhHHHHHHHHHHHHHHHHH
Q psy8116 427 VFMTLFNEINARKIHGQRNVF-EGFFSNPIFYSIWFITAASQVFIIQF--GREAFSTKSLTLEQWLWCLFFGIGTLLWGQ 503 (591)
Q Consensus 427 v~~~~~~~~~~r~~~~~~~~f-~~~~~n~~~~~~~~~~~~~~~~~v~~--~~~~F~~~~l~~~~w~~~l~~~~~~ll~~e 503 (591)
+++|++|.+++|+.+. ++| .++++|++++.++++.+++++++++. .+.+|++.||++.+|++++.++++.++++|
T Consensus 383 v~~q~~~~~~~rs~~~--s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~E 460 (472)
T d1wpga4 383 VTIEMCNALNSLSENQ--SLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDE 460 (472)
T ss_dssp HHHHHHHHHTTSCSSC--CTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCc--chhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 444 47899999999888888888777654 467899999999999999999999999999
Q ss_pred HHHhhccCcc
Q psy8116 504 VVTTVPTRKL 513 (591)
Q Consensus 504 iik~i~~~~~ 513 (591)
++|++.|++.
T Consensus 461 l~K~~~R~~~ 470 (472)
T d1wpga4 461 ILKFIARNYL 470 (472)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHhhcCC
Confidence 9999977664
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=1.9e-26 Score=204.02 Aligned_cols=125 Identities=40% Similarity=0.630 Sum_probs=106.7
Q ss_pred EEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHH
Q psy8116 122 TGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHL 201 (591)
Q Consensus 122 ~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~ 201 (591)
+..+.++++|++|++++++|+.|+++||+++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 344578999999999999999999999999999999999999999999982
Q ss_pred HhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 202 LDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 202 l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.++++++|++|...++.+ + .+.+|+|+|||.||+|||+.||+||||+ ++++.++++||+++.+++
T Consensus 62 --------~v~~~~~p~~k~~~v~~~-----q-~~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~ 126 (135)
T d2b8ea1 62 --------LVIAEVLPHQKSEEVKKL-----Q-AKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDD 126 (135)
T ss_dssp --------EEECSCCHHHHHHHHHHH-----T-TTSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCC
T ss_pred --------hhccccchhHHHHHHHHH-----H-cCCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCC
Confidence 278899999999999874 3 3579999999999999999999999999 789999999999999999
Q ss_pred hhHHHHHHH
Q psy8116 282 FSSIVKAVM 290 (591)
Q Consensus 282 ~~~i~~~i~ 290 (591)
+.+++++|+
T Consensus 127 l~~i~~aI~ 135 (135)
T d2b8ea1 127 LRDVVAAIQ 135 (135)
T ss_dssp THHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998874
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.87 E-value=2.7e-22 Score=192.45 Aligned_cols=121 Identities=13% Similarity=0.151 Sum_probs=94.3
Q ss_pred cCCcceeeccCCcccceeeeEEeeCC--CCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRK--GGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~--~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
+++.++.++||||+||+|+ ||++.+ ++.|++|+ ||+||++|++++. +|+..+++++.|+++ .+.+++||++|
T Consensus 88 ~~~~~v~~~pF~S~rK~ms-~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i-~~~~~~~a~~G 164 (214)
T d1q3ia_ 88 DRNPKVAEISFNSTNKYQL-SIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAF-QNAYLELGGLG 164 (214)
T ss_dssp HTSCEEEEEC------CEE-EEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHH-HHHHHHHHHTT
T ss_pred hhCcEeeeEeeCCCCCEEE-EEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHH-HHHHHHHhhCC
Confidence 5677899999999999999 666654 35689998 9999999999886 899999999999987 57899999999
Q ss_pred CeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCc
Q psy8116 83 LRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPE 136 (591)
Q Consensus 83 lR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~ 136 (591)
+||||+|||+++.+++..+. ..+.++.+.+|+||+|+|++|++||||+.
T Consensus 165 lRvLa~A~k~l~~~~~~~~~-----~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 165 ERVLGFCQLNLPSGKFPRGF-----KFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CEEEEEEEEEECTTTSCTTC-----CCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred cEEEEEEEEecCcccccccc-----ccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999999999876543221 11223345678999999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.84 E-value=2.6e-24 Score=224.69 Aligned_cols=239 Identities=14% Similarity=0.118 Sum_probs=166.4
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.+.+.+..+.||+|.+|+|+ ++....++.+.++. ++..+.. +++.++++ ++.+++|+.+|+|
T Consensus 119 ~~~~~~~~~i~f~~~~k~~~-~~~~~~~~~~~~~~~~a~~~~~~--------------~~~~~~~~-~~~~~~~a~~~~r 182 (380)
T d1qyia_ 119 STNLADCFNLNEQLPLQFLD-NVKVGKNNIYAALEEFATTELHV--------------SDATLFSL-KGALWTLAQEVYQ 182 (380)
T ss_dssp GGGCSSCCCCCTTTTHHHHT-TCCSSHHHHHHHHHHHHHHHTTC--------------SCCGGGST-TCHHHHHHHHHHH
T ss_pred HHhccccccCCcchHHHHHh-hhcccccchhHhhhhccHhhcCC--------------cHHHHHHH-HhHHHHHHHHHHH
Confidence 35566777889999999999 55443333333222 2222211 11222222 4567889999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCC--chHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRP--EVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~--~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
++++|++.++..+. ....+....|+++.+++++| +++++|+.|+++|++++|+|||+..+|
T Consensus 183 ~l~~~~~~~~~~~~-----------------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a 245 (380)
T d1qyia_ 183 EWYLGSKLYEDVEK-----------------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTET 245 (380)
T ss_dssp HHHHHHHHHHHHHC-----------------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred HHHHhhhccccccc-----------------ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 99999987743210 01123344688889999665 999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceEEecchhhHHhhhcc-----cchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCc
Q psy8116 163 RSIATKCGILKPGDDFLILEGKEFNRRVRDA-----NGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSRE 237 (591)
Q Consensus 163 ~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~-----~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~ 237 (591)
..+++++||...-+...++++.+........ .++.....+. ....++|.+|.+|..+++. ++..++
T Consensus 246 ~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~----~~~~~~~~~~~~k~~iv~~-----~~~~~~ 316 (380)
T d1qyia_ 246 VVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI----AALYGNNRDKYESYINKQD-----NIVNKD 316 (380)
T ss_dssp HHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH----HHHHCCCGGGHHHHHHCCT-----TCSCTT
T ss_pred HHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHH----HHHHHcCCCHHHHHHHHHH-----hCCCCC
Confidence 9999999996433333345555543221110 1111111111 1234678999999999987 788899
Q ss_pred EEEEECCCCCCHHhhhcCC---eeeeeCCCccHHHHh----cccccccCCChhHHHHHH
Q psy8116 238 VVAVTGDGTNDGPALKKAD---VGFAMGIAGTDVAKE----ASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 238 ~va~iGDg~ND~~mLk~A~---vGiamg~~~~~~ak~----aad~vl~~~~~~~i~~~i 289 (591)
.|+|+|||.||++|+|+|| |||+||..+++..++ .||+++. ++..+.+++
T Consensus 317 ~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 317 DVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp TEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred eEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 9999999999999999999 999999887765444 7999996 788877655
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.74 E-value=1e-18 Score=170.13 Aligned_cols=113 Identities=19% Similarity=0.252 Sum_probs=90.7
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCC-----cEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHH-
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGG-----GYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPM- 78 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~-----~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 78 (591)
+.+.++++|||||+||||| |+++.+++ .+++|+ ||.||++|+.++. +|+..|++++.++++. +.++++
T Consensus 117 ~~~~~v~~~pF~S~rK~Ms-vv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~-~~~~~~~ 193 (239)
T d1wpga3 117 QLMKKEFTLEFSRDRKSMS-VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKIL-SVIKEWG 193 (239)
T ss_dssp HHEEEEEEEEEETTTTEEE-EEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHH-HHHHHHT
T ss_pred hhCeEEEEeeecccccEEE-EEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHH-HHHHHHh
Confidence 5678899999999999999 66665543 478898 9999999999886 6888999999999875 567765
Q ss_pred -hhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeec
Q psy8116 79 -ACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGI 129 (591)
Q Consensus 79 -a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i 129 (591)
|++||||||+|||+++.++.... ..+....+++|+||+|+|++||
T Consensus 194 ~a~~glRvLa~A~k~~~~~~~~~~------~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 194 TGRDTLRCLALATRDTPPKREEMV------LDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp TSSCCCEEEEEEEESSCCCGGGCC------TTCGGGHHHHTCSEEEEEEEEE
T ss_pred HhhCCCEEEEEEEEECCccccccc------ccchhhHHHhcCCCEEEEEECC
Confidence 78999999999999987643211 1122345788999999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.58 E-value=3.6e-15 Score=142.40 Aligned_cols=156 Identities=19% Similarity=0.243 Sum_probs=113.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH----------------------h
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR----------------------R 189 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~----------------------~ 189 (591)
.+.+++.++|++|+++|++|+++|||+...+..++..+++. ..++..+|..+.. .
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~---~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS---GPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKR 95 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCC---cccccccceeeeccccccccccccHHHHHHHHHHHh
Confidence 47789999999999999999999999999999999999884 3344444432100 0
Q ss_pred hhcc--------------------cchhhHHHHhhhcCcce-------EEEecChhhHHHHHHHHHHhhcCCCCcEEEEE
Q psy8116 190 VRDA--------------------NGDVQQHLLDKVWPRLR-------VLARSSPTDKYTLVKGIIDSKVSDSREVVAVT 242 (591)
Q Consensus 190 ~~~~--------------------~~~~~~~~l~~~~~~~~-------v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~i 242 (591)
..+. ..+...+.+++...... +-......+|...++.+++++ +...+.++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~-~i~~~~~~~i 174 (230)
T d1wr8a_ 96 FPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL-GIKPKEVAHV 174 (230)
T ss_dssp CTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH-TSCGGGEEEE
T ss_pred cccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhccccccc-ccchhheeee
Confidence 0000 00111223333322222 222334569999999999885 4455567778
Q ss_pred CCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHH
Q psy8116 243 GDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWG 292 (591)
Q Consensus 243 GDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~g 292 (591)
|||.||++|++.||+||||+ ++++.+|++||+|+..++.+++.+++++.
T Consensus 175 GD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 175 GDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp ECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred ecCccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 99999999999999999999 67888999999999999999999988763
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=3.1e-15 Score=147.19 Aligned_cols=159 Identities=19% Similarity=0.266 Sum_probs=113.7
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhh-------------------
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVR------------------- 191 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~------------------- 191 (591)
.++.+++.++|++|+++|++++++|||+...+..+.+++++..+...++..+|..+.....
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 3588999999999999999999999999999999999999987766666666642210000
Q ss_pred ---c---------ccc----------------------------------------------hhhHHHHhhh----cCcc
Q psy8116 192 ---D---------ANG----------------------------------------------DVQQHLLDKV----WPRL 209 (591)
Q Consensus 192 ---~---------~~~----------------------------------------------~~~~~~l~~~----~~~~ 209 (591)
. ... +...+.+..+ ....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0 000 0000001100 0011
Q ss_pred eE------EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 210 RV------LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v------~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.+ +....| .+|+.+++.+++++ ....+.++++|||.||.+||+.|++|+||+ ++++.+|+.||+++..++
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~-~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~ 257 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVL-GIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNL 257 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTT
T ss_pred EEEEecCceEEecCCCCCcccccceehhhc-ccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCC
Confidence 11 112223 38999999999985 444445666799999999999999999999 678888999999999888
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.+++++
T Consensus 258 ~~Gv~~~l~~ 267 (271)
T d1rkqa_ 258 EDGVAFAIEK 267 (271)
T ss_dssp TTHHHHHHHH
T ss_pred cChHHHHHHH
Confidence 8999988873
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.54 E-value=8.4e-15 Score=140.30 Aligned_cols=157 Identities=17% Similarity=0.161 Sum_probs=111.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH----------------hhh--
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR----------------RVR-- 191 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~----------------~~~-- 191 (591)
+..+.+++.+++++|++.|++++++|||+...+..++...|+. ...+..+|..... ...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~---~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN---GPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 94 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCC---ceEEeecceEEEeCCccEEEecChHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999983 3344444432110 000
Q ss_pred -cc--------------------cchhhHHHHhhhc-CcceEE-------EecChhhHHHHHHHHHHhhcCCCCcEEEEE
Q psy8116 192 -DA--------------------NGDVQQHLLDKVW-PRLRVL-------ARSSPTDKYTLVKGIIDSKVSDSREVVAVT 242 (591)
Q Consensus 192 -~~--------------------~~~~~~~~l~~~~-~~~~v~-------~r~sp~~K~~~v~~l~~~~~~~~~~~va~i 242 (591)
.. ..+.......... ....++ ......+|+.+++.++++ ++...+.|+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~-~~i~~~~v~~~ 173 (225)
T d1l6ra_ 95 SKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEM-YSLEYDEILVI 173 (225)
T ss_dssp TTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEEE
T ss_pred HHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhh-hccchhheeee
Confidence 00 0000111111111 111221 123345999999999988 45555666677
Q ss_pred CCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 243 GDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 243 GDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
|||.||.+|++.||+||||+ ++.+.+|++||+++..++.+++.+++++
T Consensus 174 GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 174 GDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp CCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cCCcchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999 6788889999999999999999998874
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.52 E-value=5e-14 Score=139.33 Aligned_cols=71 Identities=23% Similarity=0.265 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+|+.+++.+++++ +...+.|+++|||.||.+||+.|++||||+ ++++.+|+.||+++.+++.+++.++|++
T Consensus 213 ~K~~ai~~l~~~~-gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQL-NIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHT-TCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhc-ccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 8999999999984 555556677799999999999999999999 6788889999999998889999988864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=1.8e-14 Score=141.54 Aligned_cols=72 Identities=24% Similarity=0.285 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.|+++|||.||.+||+.|++||||+ ++++.+|+.||+++.+++.+++.++|++
T Consensus 189 ~sK~~al~~l~~~l-gi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~~ 260 (269)
T d1rlma_ 189 LHKANGISRLLKRW-DLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 260 (269)
T ss_dssp CSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hHHHHHHHHHhhhh-ccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 37999999999985 555555666699999999999999999999 6788889999999998899999988873
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.46 E-value=7e-14 Score=136.83 Aligned_cols=72 Identities=29% Similarity=0.305 Sum_probs=63.4
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+.+++.+++++ ....+.++++|||.||.+||+.||+||||+ ++++.+|+.||+|+.+++.+++.++|++
T Consensus 185 ~sK~~al~~l~~~~-~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHF-GIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHH-TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhc-cccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 38999999999984 555556666799999999999999999999 6788889999999998889999999875
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.43 E-value=1.5e-13 Score=134.98 Aligned_cols=70 Identities=27% Similarity=0.265 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
+|+.+++.+++++. ...+.|+++|||.||.+||+.||+||||+ ++++.+|+.||+++.+++.++++++|+
T Consensus 190 ~K~~ai~~l~~~~~-i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMN-WKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHT-CCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhc-cCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 89999999999854 44445555699999999999999999999 788989999999999999999998875
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.42 E-value=2.7e-13 Score=133.44 Aligned_cols=71 Identities=27% Similarity=0.328 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC-hhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN-FSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~-~~~i~~~i~ 290 (591)
.+|+..++.+++. ++...+.|+++|||.||.+||+.||+|+||+ ++++.+|+.||+++..++ ..++.++++
T Consensus 206 ~~K~~~l~~l~~~-~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKH-YNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred chhHHHHHHHhhh-cccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 4999999999998 4555666777799999999999999999999 788888999999997544 455666665
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.31 E-value=1.3e-12 Score=125.50 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=89.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh--------------------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR-------------------- 189 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~-------------------- 189 (591)
.+...+.+.++|++|+++|++++++|||+...+..+.+++++.. .+++.+|..+...
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~ 91 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET---PFISENGSAIFIPKGYFPFDVKGKEVGNYIVIE 91 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS---CEEETTTTEEEECTTCCC----------CEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc---cccccCCcEEEcCCCceecccchhHHHHHHHHH
Confidence 45556789999999999999999999999999999999999843 3333333211000
Q ss_pred -----------hhc-----------ccc------------hhhHHHHhhhc------------------CcceEEE----
Q psy8116 190 -----------VRD-----------ANG------------DVQQHLLDKVW------------------PRLRVLA---- 213 (591)
Q Consensus 190 -----------~~~-----------~~~------------~~~~~~l~~~~------------------~~~~v~~---- 213 (591)
... ... ........... ....+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (243)
T d1wzca1 92 LGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRF 171 (243)
T ss_dssp CSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSSCHHHHHHHTTCEEEECSSS
T ss_pred HhhhHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhHHHHHhhhhcCeEEeecccc
Confidence 000 000 00000000000 0000000
Q ss_pred --ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc
Q psy8116 214 --RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 275 (591)
Q Consensus 214 --r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~ 275 (591)
-....+|+..++.+++++.....+.++++|||.||++||+.||+|||||| +++.+++.+|.
T Consensus 172 ~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~N-a~~~~~~~~~~ 234 (243)
T d1wzca1 172 YTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS-LKHKKAQNVSS 234 (243)
T ss_dssp EEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESS-CCCTTCEEESC
T ss_pred cchhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCC-CChHHHhhhhH
Confidence 11223899999999887544555567777999999999999999999995 55444555543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.25 E-value=8.3e-12 Score=120.38 Aligned_cols=153 Identities=16% Similarity=0.182 Sum_probs=100.5
Q ss_pred chHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH----------Hhhhcc-cc---------
Q psy8116 136 EVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN----------RRVRDA-NG--------- 195 (591)
Q Consensus 136 ~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~----------~~~~~~-~~--------- 195 (591)
+..+++.+++++|+.++++|||+...+..+.+++++..+ +..++-+|..+. ..+... ..
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~-~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCC-ceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 344566677889999999999999999999999998654 334444443211 000000 00
Q ss_pred ------------------------------hhhHHHHhhhcCcce--------EEEecChhhHHHHHHHHHHhhcCCCCc
Q psy8116 196 ------------------------------DVQQHLLDKVWPRLR--------VLARSSPTDKYTLVKGIIDSKVSDSRE 237 (591)
Q Consensus 196 ------------------------------~~~~~~l~~~~~~~~--------v~~r~sp~~K~~~v~~l~~~~~~~~~~ 237 (591)
+...+.......... +-......+|+.+++.+++.. +...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~-gi~~~ 179 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL-AMEPS 179 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT-TCCGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhc-cCChh
Confidence 000011111111111 111233458999999999984 44445
Q ss_pred EEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc-------ccccCCChhHHHHHHHH
Q psy8116 238 VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD-------IILTDDNFSSIVKAVMW 291 (591)
Q Consensus 238 ~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad-------~vl~~~~~~~i~~~i~~ 291 (591)
.++++|||.||.+||+.||.|++|+ ++.+.+|+.|| ++...++..++.++|.+
T Consensus 180 ~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 180 QTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp GEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred hEEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 5666699999999999999999999 66676688888 56666678888888875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.24 E-value=1.1e-11 Score=113.74 Aligned_cols=106 Identities=22% Similarity=0.218 Sum_probs=88.5
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecCh
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP 217 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp 217 (591)
..+|+.+++.|+.+.++||+....+...+.++++.. + ....
T Consensus 38 g~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------~---------------------------------~~~~ 78 (177)
T d1k1ea_ 38 GLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------F---------------------------------FLGK 78 (177)
T ss_dssp HHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------E---------------------------------EESC
T ss_pred hHHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------c---------------------------------cccc
Confidence 358999999999999999999999999999998831 0 1123
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~ 284 (591)
.+|...++.++++ ++...+.|+++||+.||.+||+.|++|+||+ ++.+.+|+.||+|+..+.-++
T Consensus 79 ~~K~~~l~~~~~~-~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 79 LEKETACFDLMKQ-AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp SCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTT
T ss_pred ccHHHHHHHHHHH-hcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCc
Confidence 4677888888777 4666777888899999999999999999999 788888999999998776444
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=4.3e-11 Score=113.40 Aligned_cols=52 Identities=10% Similarity=0.124 Sum_probs=44.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecch
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGK 184 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~ 184 (591)
..+.+++.++|++|+++|++++++|||+...+..+..++|+. +...++.+|.
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~--~~~~i~~nGa 71 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ--GLPLIAENGA 71 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT--TSCEEEGGGT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC--CceEEccCCe
Confidence 347889999999999999999999999999999999999983 2345566664
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=1.4e-10 Score=109.89 Aligned_cols=129 Identities=18% Similarity=0.257 Sum_probs=92.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
+++|++.+.|+.|+++|++++++||.....+..+++.+|+.. ...++-+ -++. .++ ...-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~--~~v~an~-~~~~-----~~G------------~~~g 141 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA--TNVFANR-LKFY-----FNG------------EYAG 141 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG--GGEEEEC-EEEC-----TTS------------CEEE
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcc--cceeeee-eeee-----ehh------------cccc
Confidence 478999999999999999999999999999999999999942 1122110 0000 000 0000
Q ss_pred EEe----cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCC-ccHHHHhcccccccCCChhHH
Q psy8116 212 LAR----SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIA-GTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 212 ~~r----~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~-~~~~ak~aad~vl~~~~~~~i 285 (591)
+.. ..+..|..+++.+++.. ..+.++++|||.||++|++.||++||++.+ .....++.||+++. +|..+
T Consensus 142 ~~~~~p~~~~~~K~~~v~~~~~~~---~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~el 215 (217)
T d1nnla_ 142 FDETQPTAESGGKGKVIKLLKEKF---HFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVEL 215 (217)
T ss_dssp ECTTSGGGSTTHHHHHHHHHHHHH---CCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGG
T ss_pred ceeeeeeeccchHHHHHHHHHhcc---CccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHHh
Confidence 111 34568999999886642 234567779999999999999999999843 44666788999886 56544
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.04 E-value=5.4e-10 Score=103.53 Aligned_cols=130 Identities=14% Similarity=0.117 Sum_probs=88.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
+..++....++.+ +.+.+...+|+.............++............. .....
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~ 125 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS----------------------DRVVG 125 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT----------------------SCEEE
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc----------------------ccccc
Confidence 4556666666655 578999999999999999999999884321111111110 01112
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.....+..+...++. ++...+.|+++|||.||++||+.||+||||+ +..++.++++|+++. ++++.++++|..
T Consensus 126 ~~~~~~~~~~~~~~~-----~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 126 YQLRQKDPKRQSVIA-----FKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp EECCSSSHHHHHHHH-----HHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred ccccchhhHHHHHHH-----hcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 222333344444443 3445667777799999999999999999994 788888889999875 488888887765
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.00 E-value=1.3e-10 Score=108.03 Aligned_cols=137 Identities=21% Similarity=0.204 Sum_probs=98.4
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
...++.+++.+.++.++..|..+.++||.....+.....+.+....-.. .+...... ..
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------------~~ 130 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGK-------------------LT 130 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTE-------------------EE
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccccc-------------------cc
Confidence 3457889999999999999999999999999999999998887421000 01000000 00
Q ss_pred ceEE-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 209 LRVL-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 209 ~~v~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.... .-..+..|...++.+++.+ +...+.+.++|||.||++|++.||+|||| ++.+..|+.||+++..++++++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~ 207 (210)
T d1j97a_ 131 GDVEGEVLKENAKGEILEKIAKIE-GINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILK 207 (210)
T ss_dssp EEEECSSCSTTHHHHHHHHHHHHH-TCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccccccccccccccchhhhHHHHh-cccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHH
Confidence 0000 1123456777777777764 45555566669999999999999999999 367777999999999888998876
Q ss_pred HH
Q psy8116 288 AV 289 (591)
Q Consensus 288 ~i 289 (591)
+|
T Consensus 208 ~l 209 (210)
T d1j97a_ 208 YI 209 (210)
T ss_dssp GC
T ss_pred Hh
Confidence 54
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=6.5e-10 Score=105.26 Aligned_cols=142 Identities=13% Similarity=0.100 Sum_probs=99.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEe----cchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLIL----EGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l----~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
++.|++.+.++.|++.|+++.++||.....+..+++++|+. +.+.+. ++..... .....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~---~~~~an~~~~~~~~~~~--------------~~~~~ 137 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNHASFDNDYIHI--------------DWPHS 137 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCG---GGEEEEEEECSSSBCEE--------------ECTTC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCc---cceeeeeEEEeCCccee--------------ccccc
Confidence 58899999999999999999999999999999999999874 233221 1111000 00001
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.........|..|..+++. ++...+.|+++||+.||++|++.||+++|++.......++..+++. -++|+.+..
T Consensus 138 ~~~~~~~~k~~~~~~~~~~-----~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~ 211 (226)
T d2feaa1 138 CKGTCSNQCGCCKPSVIHE-----LSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRK 211 (226)
T ss_dssp CCTTCCSCCSSCHHHHHHH-----HCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHH
T ss_pred cccccccCCHHHHHHHHHH-----hcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHH
Confidence 1112235567788888876 5667788889999999999999999999998544444444444433 448999988
Q ss_pred HHHHHHHHH
Q psy8116 288 AVMWGRNVY 296 (591)
Q Consensus 288 ~i~~gR~~~ 296 (591)
.+.+-....
T Consensus 212 ~l~~~~~~~ 220 (226)
T d2feaa1 212 EIENVKEVQ 220 (226)
T ss_dssp HHHTSHHHH
T ss_pred HHHHHHHHH
Confidence 887544333
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=7.7e-10 Score=104.84 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCC----CCCHHhhhcCC-eeeeeCCCccHHHHhcccccc
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDG----TNDGPALKKAD-VGFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg----~ND~~mLk~A~-vGiamg~~~~~~ak~aad~vl 277 (591)
.+|+.+++.|++ ...+.|.++||+ .||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~----~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQ----DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTT----SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhc----CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 399999999854 355566777995 59999999997 799999 78889999999886
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.61 E-value=5.9e-09 Score=97.96 Aligned_cols=62 Identities=15% Similarity=0.350 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+|+.+++.++++ . .++++||+.||.+||+.|+.|+||++ |. ++.+|++.+. +...+.++++
T Consensus 158 ~~Kg~al~~l~~~-----~-~~i~~GDs~ND~~Mf~~~~~~~av~~-g~--~~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-----R-PAIIAGDDATDEAAFEANDDALTIKV-GE--GETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTT-----S-CEEEEESSHHHHHHHHTTTTSEEEEE-SS--SCCCCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHhcc-----c-cceeecCCCChHHHHhccCCeEEEEe-CC--CCccCeEEcC--CHHHHHHHHH
Confidence 4999999997542 3 45566999999999999976666542 21 1468888887 4555555444
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=3.9e-08 Score=92.85 Aligned_cols=53 Identities=21% Similarity=0.402 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECC----CCCCHHhhhcCC-eeeeeCCCccHHHHhccccc
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGD----GTNDGPALKKAD-VGFAMGIAGTDVAKEASDII 276 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGD----g~ND~~mLk~A~-vGiamg~~~~~~ak~aad~v 276 (591)
.+|+.+++.|+ +...+.|+++|| |.||.+||+.|+ .|++++ +..+ +|+.++.+
T Consensus 184 vsKg~al~~l~----~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~-~~~~~~~l 241 (243)
T d2amya1 184 WDKRYCLRHVE----NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APED-TRRICELL 241 (243)
T ss_dssp CSGGGGGGGTT----TSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHH-HHHHHHHH
T ss_pred cCHHHHHHHHh----CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHH-HHHHHHHH
Confidence 39999998863 345567777799 779999999998 688877 4444 46665543
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.90 E-value=1.2e-05 Score=75.05 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=84.0
Q ss_pred CCCCchHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAG-ITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aG-I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++-|++.++++.|++.| +++.++||.....+..+.+..|+...-+. ++ .+.+.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~-i~-~~~~~------------------------ 144 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF-GA-FADDA------------------------ 144 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC-EE-CTTTC------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc-cc-ccccc------------------------
Confidence 35689999999999987 89999999999999999999999542221 11 11110
Q ss_pred EEEecChhhHHH-HHHHHHHhh-cCCCCcEEEEECCCCCCHHhhhcCC---eeeeeCCCccHH-HHhcccccccCCChhH
Q psy8116 211 VLARSSPTDKYT-LVKGIIDSK-VSDSREVVAVTGDGTNDGPALKKAD---VGFAMGIAGTDV-AKEASDIILTDDNFSS 284 (591)
Q Consensus 211 v~~r~sp~~K~~-~v~~l~~~~-~~~~~~~va~iGDg~ND~~mLk~A~---vGiamg~~~~~~-ak~aad~vl~~~~~~~ 284 (591)
..+..+.. .++.+.+.. .+...+.+++|||+.+|+.|-+.|| ++|+.|....+. .+..||+++. +++.
T Consensus 145 ----~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~e 218 (228)
T d2hcfa1 145 ----LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAE 218 (228)
T ss_dssp ----SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCC
T ss_pred ----ccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHH
Confidence 00111111 122222211 1345577888899999999999999 455556444443 4446899987 7888
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+.++|.
T Consensus 219 l~~~l~ 224 (228)
T d2hcfa1 219 TDEVLA 224 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777665
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.78 E-value=5.1e-06 Score=76.98 Aligned_cols=125 Identities=19% Similarity=0.242 Sum_probs=83.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++++.++.|++.|+++.++||.....+..+.+++|+...-+.. +.+.+.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~--~~~~~~------------------------- 147 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM--LGGQSL------------------------- 147 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--ECTTTS-------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccc--cccccc-------------------------
Confidence 46899999999999999999999999999999999999985321111 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeee--CCCc-cHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAM--GIAG-TDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giam--g~~~-~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.....|..+...+++. ++...+.++++||+.+|+.+-+.||+ .|.+ |.+. .+..+..+|+++. +++.+.+
T Consensus 148 ---~~~kp~p~~~~~~~~~-~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ 221 (224)
T d2hsza1 148 ---PEIKPHPAPFYYLCGK-FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 221 (224)
T ss_dssp ---SSCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred ---ccccccchhhHHHHHH-hhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHH
Confidence 0011122233333333 46677788888999999999999996 3333 3222 2344556888887 7777665
Q ss_pred HH
Q psy8116 288 AV 289 (591)
Q Consensus 288 ~i 289 (591)
+|
T Consensus 222 ii 223 (224)
T d2hsza1 222 IT 223 (224)
T ss_dssp GT
T ss_pred hh
Confidence 43
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.77 E-value=1.2e-05 Score=74.36 Aligned_cols=121 Identities=14% Similarity=0.184 Sum_probs=80.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+.+...+..+.+..|+..--+. ++.+.+..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~--i~~~~~~~------------------------ 141 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA--LASAEKLP------------------------ 141 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEECTTSS------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc--cccccccc------------------------
Confidence 4679999999999999999999999999999999999999432121 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee-eeC--CCccHHHHhcccccccCCChhHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF-AMG--IAGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi-amg--~~~~~~ak~aad~vl~~~~~~~i 285 (591)
.+..+..+.+.+++. ++...+.++++||+.+|+.+-+.||+.. ++. ....+.....||+++. ++..+
T Consensus 142 ----~~Kp~~~~~~~~~~~-l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~el 211 (218)
T d1te2a_ 142 ----YSKPHPQVYLDCAAK-LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTEL 211 (218)
T ss_dssp ----CCTTSTHHHHHHHHH-HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGC
T ss_pred ----cchhhHHHHHHHHHH-cCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEEC--ChhhC
Confidence 011222334444444 4566778888999999999999999643 332 1122222346787776 55543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.76 E-value=3.1e-05 Score=75.21 Aligned_cols=140 Identities=14% Similarity=0.169 Sum_probs=83.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++|+++++.++.|++.|+++.++||--...+..+++++|+..++-.+ ..|.-+++.. + ...-
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I-~sN~l~f~~~-----~------------~~~~ 196 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV-VSNFMDFDEN-----G------------VLKG 196 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEE-EEECEEECTT-----S------------BEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceE-EeeEEEEeCC-----e------------eEee
Confidence 48999999999999999999999999999999999999986533222 2222222110 0 0000
Q ss_pred EE--ecChhhHHHHHHHHHHh-hcCCCCcEEEEECCCCCCHHhhhcC---CeeeeeCC--Ccc----HHHHhcccccccC
Q psy8116 212 LA--RSSPTDKYTLVKGIIDS-KVSDSREVVAVTGDGTNDGPALKKA---DVGFAMGI--AGT----DVAKEASDIILTD 279 (591)
Q Consensus 212 ~~--r~sp~~K~~~v~~l~~~-~~~~~~~~va~iGDg~ND~~mLk~A---~vGiamg~--~~~----~~ak~aad~vl~~ 279 (591)
+- -....+|...+.....+ ........+.++|||.||+.|.+.+ +.+++.|- ... +.-.++-|+|+.+
T Consensus 197 ~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~ 276 (291)
T d2bdua1 197 FKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVK 276 (291)
T ss_dssp ECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEET
T ss_pred ccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEec
Confidence 00 01233555444322221 1223445666679999999999853 44444432 111 1223677999876
Q ss_pred CChhHHHHHH
Q psy8116 280 DNFSSIVKAV 289 (591)
Q Consensus 280 ~~~~~i~~~i 289 (591)
|.--.++..|
T Consensus 277 d~~~~v~~~i 286 (291)
T d2bdua1 277 EESLEVVNSI 286 (291)
T ss_dssp CCBCHHHHHH
T ss_pred CCChhHHHHH
Confidence 6544444433
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.74 E-value=1.8e-05 Score=72.61 Aligned_cols=123 Identities=13% Similarity=0.158 Sum_probs=87.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.+++.+.++.++..| ++.++|+.....+..+.+++|+...-+..
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v-------------------------------- 129 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGI-------------------------------- 129 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccc--------------------------------
Confidence 457899999999998775 89999999999999999999985321111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccH-HHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTD-VAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~-~ak~aad~vl~~~~~~~i~ 286 (591)
+.+...+..|..+++.+++. ++...+.+++|||+.||+.+-+.||+ +|+-|....+ .....+|+++. ++..+.
T Consensus 130 ~~~~~~~~~~p~~~~~~~~~-~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~ 206 (210)
T d2ah5a1 130 YGSSPEAPHKADVIHQALQT-HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVL 206 (210)
T ss_dssp EEECSSCCSHHHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHH
T ss_pred ccccccccccccccchhhhh-hhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHH
Confidence 12223344555666666666 56667778888999999999999996 4444433333 33345899877 677766
Q ss_pred HHH
Q psy8116 287 KAV 289 (591)
Q Consensus 287 ~~i 289 (591)
+.+
T Consensus 207 ~~l 209 (210)
T d2ah5a1 207 AYF 209 (210)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.59 E-value=5.1e-05 Score=71.95 Aligned_cols=129 Identities=14% Similarity=0.184 Sum_probs=83.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.++++.|++.|+++.++||.+...+..+.+..|+..--.+. ++.+.+..
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~-~~~~d~~~----------------------- 153 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-LVTPDDVP----------------------- 153 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-CBCGGGSS-----------------------
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccc-cccccccc-----------------------
Confidence 368899999999999999999999999999999999999885321111 11221110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCc----cH----------------
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAG----TD---------------- 267 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~----~~---------------- 267 (591)
..+..|..=..+++ .+...+.+.++++||+.+|+.+-+.||+ ||+-|.+. .+
T Consensus 154 -~~KP~p~~~~~~~~----~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (257)
T d1swva_ 154 -AGRPYPWMCYKNAM----ELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEV 228 (257)
T ss_dssp -CCTTSSHHHHHHHH----HHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHH
T ss_pred -ccccChHHHHHHHH----HhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHH
Confidence 01122322222333 3233456788888999999999999995 44434210 00
Q ss_pred ----HHHhcccccccCCChhHHHHHHH
Q psy8116 268 ----VAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 268 ----~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
..+.-||+++. ++..+..+|.
T Consensus 229 ~~~~l~~~gad~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 229 VRNRFVENGAHFTIE--TMQELESVME 253 (257)
T ss_dssp HHHHHHHTTCSEEES--SGGGHHHHHH
T ss_pred HHHHHHhCCCCEEEC--CHHHHHHHHH
Confidence 11123899988 7777777665
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.52 E-value=0.00013 Score=67.69 Aligned_cols=126 Identities=15% Similarity=0.151 Sum_probs=84.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+ +|+++.++|+........+.+.+|+...-+. +. ...+..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~-i~-~s~~~~------------------------ 152 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS-IT-TSEEAG------------------------ 152 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE-EE-EHHHHT------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc-cc-cccccc------------------------
Confidence 56799999999996 5899999999999999999999998432121 11 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeee-eC-CCccHHHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFA-MG-IAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGia-mg-~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
.+..+..+.+.+++. ++...+.++++||+ .+|+.+-+.||+... +. ..........+|+++. +++.+.++
T Consensus 153 ----~~KP~~~~~~~~~~~-l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~ 225 (230)
T d1x42a1 153 ----FFKPHPRIFELALKK-AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKI 225 (230)
T ss_dssp ----BCTTSHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHH
T ss_pred ----ccchhhHHHHHHHhh-hcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHH
Confidence 011123455555555 45556678888998 589999999997432 21 1222333567899888 78888887
Q ss_pred HHH
Q psy8116 289 VMW 291 (591)
Q Consensus 289 i~~ 291 (591)
|.+
T Consensus 226 l~~ 228 (230)
T d1x42a1 226 VDE 228 (230)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00024 Score=63.85 Aligned_cols=57 Identities=25% Similarity=0.293 Sum_probs=42.6
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCee--eee--CCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVG--FAM--GIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vG--iam--g~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
+....+.+.||||+.+|+.+-+.|+++ +.+ |....+..+..||+++. ++..+.++|+
T Consensus 121 ~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~~ik 181 (182)
T d2gmwa1 121 LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIK 181 (182)
T ss_dssp HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHHHHHHHhc
Confidence 345566678889999999999999985 333 32334556677999988 8888888775
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.00017 Score=66.99 Aligned_cols=118 Identities=19% Similarity=0.126 Sum_probs=78.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-.+.|++.+++++|+++|+++.++|+............+|+..-.+....... +.
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~------------------------ 180 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD-TK------------------------ 180 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEEC-GG------------------------
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeec-cc------------------------
Confidence 45789999999999999999999999999999999998987432111111100 00
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee----CCCccHHHHhccccccc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM----GIAGTDVAKEASDIILT 278 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam----g~~~~~~ak~aad~vl~ 278 (591)
...+-+..+....++. ++...+.++++||..+|+.+-++||+.... |+.........++.++.
T Consensus 181 ----~~~KP~p~~~~~~~~~-~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 181 ----IGHKVESESYRKIADS-IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp ----GCCTTCHHHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred ----cccCCCcHHHHHHHHH-hCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 0012223344444444 455667888889999999999999985443 43434344556666665
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.29 E-value=0.00011 Score=66.81 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=75.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++.|+++.++|+... .+..+.++.|+. +++-.+-+.+-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~---~~f~~i~~s~~~------------------------ 133 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE---SYFTEILTSQSG------------------------ 133 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG---GGEEEEECGGGC------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc---cccccccccccc------------------------
Confidence 4679999999999999999999998764 566788889984 222221111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccHHHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
..+..|..+.+.+++. ++...+.+++|||+.+|+.+-+.||+. |++. .+. ..+|..+. ++..+.++
T Consensus 134 ---~~~Kp~~~~~~~~~~~-~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~--~~~dl~~l 200 (204)
T d2go7a1 134 ---FVRKPSPEAATYLLDK-YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQ--ALADISRI 200 (204)
T ss_dssp ---CCCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECS--STTHHHHH
T ss_pred ---cccchhHHHHHHHHHH-hCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecC--CHHHHHHH
Confidence 0122234455555555 455667888889999999999999975 3444 232 23444443 45555443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.20 E-value=2.9e-05 Score=71.21 Aligned_cols=121 Identities=12% Similarity=0.164 Sum_probs=79.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+ +++++.++|+.....+..+.++.|+.. .+-.+.+.+-.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~---~f~~i~~~~~~------------------------ 133 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM---RMAVTISADDT------------------------ 133 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG---GEEEEECGGGS------------------------
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc---ccccccccccc------------------------
Confidence 46699999999997 479999999999999999999999842 22222221100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee---CCCccHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM---GIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam---g~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
..+..+..+++.+++. ++...+.++++||+.+|+.+-++||+.... | ..+....+.+|.++. ++..+.+
T Consensus 134 ---~~~KP~p~~~~~~~~~-~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll~ 205 (207)
T d2hdoa1 134 ---PKRKPDPLPLLTALEK-VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDILE 205 (207)
T ss_dssp ---SCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGGG
T ss_pred ---ccchhhhhhhcccccc-eeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHHh
Confidence 0111233344444444 455567778889999999999999976543 3 223333456777765 5655543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.12 E-value=0.00037 Score=61.37 Aligned_cols=91 Identities=16% Similarity=0.147 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN-INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.++++.|+++|+++.++|+.+ ...+....+..++..... .
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~---------------------------------~ 92 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI---------------------------------Q 92 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS---------------------------------E
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce---------------------------------e
Confidence 578999999999999999999999755 455666666666631100 0
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
+.. .+..|...++.+++. ++...+.++++||+.+|+.+-++||+-
T Consensus 93 ~~~--~~kp~~~~~~~~~~~-~~~~~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 93 REI--YPGSKVTHFERLHHK-TGVPFSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp EEE--SSSCHHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred eec--ccCCChHHHHHHHHH-hCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 111 222344445555555 466677888889999999999999974
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.92 E-value=0.00021 Score=67.68 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=30.3
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy8116 134 RPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC 169 (591)
Q Consensus 134 r~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~ 169 (591)
-+++.++|++|+++|++++++|++...+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999988777777766654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.79 E-value=0.0016 Score=61.41 Aligned_cols=65 Identities=25% Similarity=0.339 Sum_probs=44.2
Q ss_pred HHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCe-eeee--CCCccHHHHhc---ccccccCCChhHHHHHH
Q psy8116 222 TLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADV-GFAM--GIAGTDVAKEA---SDIILTDDNFSSIVKAV 289 (591)
Q Consensus 222 ~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~v-Giam--g~~~~~~ak~a---ad~vl~~~~~~~i~~~i 289 (591)
.+.+.+++. ++...+.++||||+. +|+.+-+.||+ ++.+ |....+....+ +|+++. ++..+.++|
T Consensus 189 ~~~~~a~~~-l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 189 LVVDVISEK-FGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHhh-hccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 444555555 466778888999995 69999999996 4554 32223333332 588888 888888776
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.71 E-value=0.0015 Score=60.85 Aligned_cols=126 Identities=11% Similarity=0.078 Sum_probs=82.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+ .|+++.++|+..........+++|+...-+.. . .+.+..
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i-~-~s~~~~------------------------ 161 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAI-V-IGGEQK------------------------ 161 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE-E-EGGGSS------------------------
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhcccccccccc-c-cccccc------------------------
Confidence 46799999999998 58999999999999999999999985432221 1 111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee-eeeCCC---ccHHHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG-FAMGIA---GTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg~~---~~~~ak~aad~vl~~~~~~~i~ 286 (591)
...|. ..+.+.+++. ++...+.++++||.. +|+.+-+.||+. +..-+. ........+|+++. +...+.
T Consensus 162 --~~KP~--p~~~~~~~~~-~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~ 234 (247)
T d2gfha1 162 --EEKPA--PSIFYHCCDL-LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELP 234 (247)
T ss_dssp --SCTTC--HHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHH
T ss_pred --cchhh--hhhHHHHHHH-hhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHH
Confidence 00111 2345555555 345556677889995 899999999985 433111 11122335788877 788888
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
++|+.
T Consensus 235 ~ll~~ 239 (247)
T d2gfha1 235 ALLQS 239 (247)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77763
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.71 E-value=0.00031 Score=60.46 Aligned_cols=99 Identities=14% Similarity=0.159 Sum_probs=59.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhh--cC
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV--WP 207 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~--~~ 207 (591)
++.+.|++.+.++.++++|++++++||++......+.+.++. ........ ..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~--------------------------~~~~~~~~~~~~ 87 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM--------------------------TRKWVEDIAGVP 87 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH--------------------------HHHHHHHTTCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH--------------------------HhhhhhhcCCCc
Confidence 567899999999999999999999999974322111111100 00000000 00
Q ss_pred cceEEEe------cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 208 RLRVLAR------SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 208 ~~~v~~r------~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
....+.+ ..+.-|..+++.+ .....++++++||...|+.|.+.+|+-
T Consensus 88 ~~~~~~~~~~~~~~d~~~k~~~l~~~----~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 88 LVMQCQREQGDTRKDDVVKEEIFWKH----IAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CSEEEECCTTCCSCHHHHHHHHHHHH----TTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred EEEeecccccccCCchHHHHHHHHHh----ccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 1111111 1223455555443 345667889999999999999999974
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.71 E-value=0.0016 Score=58.08 Aligned_cols=108 Identities=17% Similarity=0.066 Sum_probs=69.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEec-chhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILE-GKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~-g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++++.++.+++.|+++.++|+.+... ..+.++.|+.. .+-.+- +.+...
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~---~fd~i~~~~~~~~---------------------- 132 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAA---YFTEVVTSSSGFK---------------------- 132 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGG---GEEEEECGGGCCC----------------------
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhcccc---ccccccccccccc----------------------
Confidence 567999999999999999999999977654 45678888842 222221 111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 275 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~ 275 (591)
.+..| .+.+.+++. ++. +.++++||+.+|+.+-++||+-...= .+.+..++..|+
T Consensus 133 --~KP~p----~~~~~~~~~-~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 133 --RKPNP----ESMLYLREK-YQI--SSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp --CTTSC----HHHHHHHHH-TTC--SSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred --cCCCH----HHHHHHHHH-cCC--CCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 01112 233344443 333 23788899999999999999875433 456666666553
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.0015 Score=61.39 Aligned_cols=44 Identities=11% Similarity=0.208 Sum_probs=33.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCCCC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVT---GDNINTARSIATKCGILKP 174 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~ 174 (591)
+.+=|++.++|+.|+++|++++++| ++........-.++|+..+
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 3444789999999999999999998 4555666555667887544
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.26 E-value=0.0015 Score=59.45 Aligned_cols=124 Identities=13% Similarity=0.199 Sum_probs=82.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
..+.+++.++++.+++.|+++.++|+-............++...-+..+.. .+..
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s--~~~~----------------------- 146 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSV--DPVQ----------------------- 146 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEES--GGGT-----------------------
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeee--eeee-----------------------
Confidence 346789999999999999999999999999999999888885433322221 1110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee-eC--CCccHHHHhcccccccCCChhHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA-MG--IAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia-mg--~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
...|. ..+.+..++. ++...+.+++|||+.+|+.+-+.||+-.+ +. ....+.....+|+++. ++..+.+
T Consensus 147 ---~~KP~--p~~~~~~~~~-~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 147 ---VYKPD--NRVYELAEQA-LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp ---CCTTS--HHHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred ---ccccH--HHHHHHHHHH-hCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 00111 2233444444 35566778888999999999999997644 32 1222222345788876 6777654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.83 E-value=0.016 Score=52.95 Aligned_cols=148 Identities=20% Similarity=0.310 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH----------------Hhhhcccc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN----------------RRVRDANG 195 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~----------------~~~~~~~~ 195 (591)
.+-|++.++++.+++. ....++|-.-..-+.++|+.+|+. .. ...+.-+++ ..+.+.+.
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~e--~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ 155 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--GE--LHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 155 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--SE--EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--ce--eecccccccccCCChHHHHHHHHHhhhccCccH
Confidence 3569999999999887 677777777888899999999994 22 111111111 01111111
Q ss_pred hhhHHHHhhhcC---------cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe--eeeeCCC
Q psy8116 196 DVQQHLLDKVWP---------RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV--GFAMGIA 264 (591)
Q Consensus 196 ~~~~~~l~~~~~---------~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v--Giamg~~ 264 (591)
+...+.++.+.+ .++.. -...|..+++.+++.... ...+++||+..|..||+.|.= |+|++-|
T Consensus 156 eel~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~---~~~~~VGDSITDve~Lr~~r~~gGlaIsFN 229 (308)
T d1y8aa1 156 EELFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGI---DFPVVVGDSISDYKMFEAARGLGGVAIAFN 229 (308)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTC---SSCEEEECSGGGHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccC---CcceeccCccccHHHHHHHhcCCCeeEEec
Confidence 222222222221 22211 235788888888776433 223778999999999998742 7777778
Q ss_pred ccHHHHhcccccccCCChhHHHHHHH
Q psy8116 265 GTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 265 ~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
|.+-+-..||+.+.+.+-..+..++.
T Consensus 230 GN~Yal~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 230 GNEYALKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CCHHHHTTCSEEEECSSTHHHHHHHH
T ss_pred CccccccccceEEeccchhHHHHHHH
Confidence 88988999999988777766665554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.70 E-value=0.0054 Score=57.46 Aligned_cols=57 Identities=18% Similarity=0.237 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhcCCCCcEEEEECCCCC-CHHhhhcCCe-eeeeC--CCccHHHHhc---cccccc
Q psy8116 221 YTLVKGIIDSKVSDSREVVAVTGDGTN-DGPALKKADV-GFAMG--IAGTDVAKEA---SDIILT 278 (591)
Q Consensus 221 ~~~v~~l~~~~~~~~~~~va~iGDg~N-D~~mLk~A~v-Giamg--~~~~~~ak~a---ad~vl~ 278 (591)
..+.+..+++ ++...+.++||||+.+ |+.+-++||+ +|.+. ....+..+.. +|+++.
T Consensus 183 p~~~~~al~~-l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 183 AVIMNKALDR-LGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp HHHHHHHHHH-HTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEES
T ss_pred cccceehhhh-ccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEEC
Confidence 3445555555 3556678889999976 9999999997 66653 2222222222 378766
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.54 E-value=0.0043 Score=56.26 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=63.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDN----INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
+.|++.+.++.+++.|++|+.+|||. ..|+..+.+.+|+...+...+.+.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------- 143 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------- 143 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC-----------------------
Confidence 45789999999999999999999986 356666667788854332222222211
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeee
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAM 261 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giam 261 (591)
.....|...++. ..+++++||..+|..+-+.|++ +|.+
T Consensus 144 ------~~K~~rr~~Ik~---------y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 144 ------PGQNTKSQWLQD---------KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp ------TTCCCSHHHHHH---------TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred ------CCchHHHHHHHH---------cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 122345555543 4678889999999999999984 5654
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.48 E-value=0.003 Score=57.50 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=67.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++-|++.+.++.|++.|+++.++|+... +....+..|+...-+. ++.+.+..
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~--i~~~~~~~----------------------- 142 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA--IADPAEVA----------------------- 142 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE--ECCTTTSS-----------------------
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc--cccccccc-----------------------
Confidence 45789999999999999999999999754 5677888888532111 12221110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg 262 (591)
...| +..+.+.+++. ++...+.+++|||+.+|+.+-+.||+ +|+++
T Consensus 143 ---~~KP--~~~~~~~~l~~-~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 143 ---ASKP--APDIFIAAAHA-VGVAPSESIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp ---SCTT--STHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ---cccc--ChHHHHHHHHH-cCCCCceEEEEecCHHHHHHHHHcCCEEEEEC
Confidence 0112 22344555555 45566678889999999999999996 45555
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.39 E-value=0.011 Score=53.42 Aligned_cols=128 Identities=12% Similarity=0.144 Sum_probs=79.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
...+.|++.+.+++++. +..++|+.....+..+..++|+...-+..++. +.+...
T Consensus 83 ~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~-~~~~~~--------------------- 137 (222)
T d2fdra1 83 DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYS-AKDLGA--------------------- 137 (222)
T ss_dssp HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEE-HHHHCT---------------------
T ss_pred ccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecc-cccccc---------------------
Confidence 34578888888887754 55789999999999999999996432222221 111100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eee--CCCc----cH-HHHhcccccccCCC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAM--GIAG----TD-VAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iam--g~~~----~~-~ak~aad~vl~~~~ 281 (591)
.+..| +..+....++. ++...+.+++|||+.+|+.+-+.||+- |++ |... .+ ....-||+++. +
T Consensus 138 ---~~~KP--~~~~~~~~~~~-l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~--~ 209 (222)
T d2fdra1 138 ---DRVKP--KPDIFLHGAAQ-FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--R 209 (222)
T ss_dssp ---TCCTT--SSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--C
T ss_pred ---ccccc--CHHHHHHHHHh-hCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEEC--C
Confidence 01112 22333344444 456667888889999999999999963 333 3111 11 22334899988 7
Q ss_pred hhHHHHHHH
Q psy8116 282 FSSIVKAVM 290 (591)
Q Consensus 282 ~~~i~~~i~ 290 (591)
+..+..+|.
T Consensus 210 l~eL~~ll~ 218 (222)
T d2fdra1 210 MQDLPAVIA 218 (222)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.21 E-value=0.0078 Score=54.87 Aligned_cols=26 Identities=42% Similarity=0.612 Sum_probs=23.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGD 157 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd 157 (591)
.+-|++.++|++|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 36799999999999999999999963
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=93.70 E-value=0.12 Score=46.89 Aligned_cols=125 Identities=9% Similarity=0.100 Sum_probs=80.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.+++.+++++++ |+.+.++|+.+...+.......|+...-+.. +.+.+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v--~~s~~~~----------------------- 144 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAV--ISVDAKR----------------------- 144 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EEGGGGT-----------------------
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccc--ccccccc-----------------------
Confidence 467789999999885 7889999999999999998999885432222 2221110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccH--------------H-------
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTD--------------V------- 268 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~--------------~------- 268 (591)
...|.- .+.+..++. ++...+.+++|||+.+|+.+-+.||+. |.+...+.+ .
T Consensus 145 ---~~KP~p--~~f~~a~~~-lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (245)
T d1qq5a_ 145 ---VFKPHP--DSYALVEEV-LGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRM 218 (245)
T ss_dssp ---CCTTSH--HHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHS
T ss_pred ---ccCccH--HHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhh
Confidence 011221 234444444 455566788889999999999999964 323211110 0
Q ss_pred ----HHhcccccccCCChhHHHHHHH
Q psy8116 269 ----AKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 269 ----ak~aad~vl~~~~~~~i~~~i~ 290 (591)
....+|+++. ++..+.++|+
T Consensus 219 ~~~~~~~~pd~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 219 REETYAEAPDFVVP--ALGDLPRLVR 242 (245)
T ss_dssp SCCTTSCCCSEEES--SGGGHHHHHH
T ss_pred hhhhccCCCCEEEC--CHHHHHHHHH
Confidence 0124788887 8888887775
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.76 E-value=0.057 Score=48.29 Aligned_cols=105 Identities=11% Similarity=0.157 Sum_probs=62.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN----INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
.+.|++.+.++.|+++|+++.++|+.. ...........|+...-+. ++.+.+..
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~--i~~s~~~~-------------------- 154 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDF--LIESCQVG-------------------- 154 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSE--EEEHHHHS--------------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhce--eeehhhcc--------------------
Confidence 467899999999999999999999633 2233444455555321111 11111110
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeCCCccHH
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMGIAGTDV 268 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg~~~~~~ 268 (591)
..+..|+ +.+..++. ++...+.++||||..+|+.+-+.||+ +|.+. .+.+.
T Consensus 155 ----~~KP~p~----~~~~~~~~-~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 155 ----MIKPEPQ----IYNFLLDT-LKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp ----CCTTCHH----HHHHHHHH-HTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred ----CCCCChH----HHHHHHHH-hCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 0012232 22333333 35555667788999999999999997 45444 34443
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.47 E-value=0.044 Score=48.77 Aligned_cols=100 Identities=12% Similarity=0.120 Sum_probs=59.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH----HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARS----IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~----ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
++.+++.++++.|++.|+++.++|+........ .....++...-+. ++.+.+..
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~--i~~s~~~~-------------------- 156 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDF--LIESCQVG-------------------- 156 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSE--EEEHHHHT--------------------
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccE--EEeccccc--------------------
Confidence 367899999999999999999999754333222 2222233211111 11111100
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeC
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMG 262 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg 262 (591)
. ..-+..+.+.+++. ++...+.++++||...|+.+-++||+ +|.+.
T Consensus 157 ------~--~KP~~~~~~~~~~~-~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 157 ------M--VKPEPQIYKFLLDT-LKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp ------C--CTTCHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred ------c--chhHHHHHHHHhhh-cccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 0 11123344455555 34445667788999999999999998 55554
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.14 E-value=0.034 Score=48.16 Aligned_cols=26 Identities=31% Similarity=0.445 Sum_probs=23.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGD 157 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd 157 (591)
.+-|++.++|+.|+++|+++.++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 35799999999999999999999975
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=91.58 E-value=0.0088 Score=52.29 Aligned_cols=100 Identities=12% Similarity=0.169 Sum_probs=60.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC-GILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~-gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.+++.+.+..++..|+++.++|+-+...+.....+. |+...-+. + +.+.+.
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~-v-~~s~~~------------------------ 137 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADH-I-YLSQDL------------------------ 137 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSE-E-EEHHHH------------------------
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccc-e-eecccc------------------------
Confidence 46789999999999999999999985544433222211 11100000 0 000000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giamg 262 (591)
..+.-+..+.+.+++. ++...+.++++||+.+|+.+-+.||+ +|.+.
T Consensus 138 ----~~~Kp~~~~~~~~~~~-~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 138 ----GMRKPEARIYQHVLQA-EGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp ----TCCTTCHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred ----cccccchHHHHHHHHh-cCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 1122234445555555 45566778888999999999999997 56665
|