Psyllid ID: psy8152

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440----
Protein Sequence
MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGGRRRGS
Secondary Structure (PSIPRED)
ccccccccEEEEcccccEEEEEEcccccEEEcEEEEccccccccEEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEEccccEEEEEEEEcccEEEEEEcccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEEccccEEEEEEEccccccccccEEEEEEEEcccccEEEEEEccccEEEEEcccccccccEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccccccEEEccccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEEccEEEEEEEcccccccccccHHHHccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEcccccEEEEcccccccccHHHHccccccccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEEccccccccEEEcccccccEEEEEEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEEEcccEEEEEEccccccccccccccccccccccccccccHHHHHHccEEEEccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mtladdyniyigsstgafkgvnlskdkciIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGqkikiydtdfknfntntdvsfgegdivgvsryDECILTAVKSGDVKlwryktepdqwtnfnvgpqlecmkhnkhsniiatggkendlklwdlnttknifsaknVSHRVLVysvkpdefdlrrpvwvngisflpnsdkvavcskqgyvrvydpkittqrrpvlkvdipdvalscitttnqshyvIVGSTTGDMMAvdlrgkgkpcykykgfagcvkdiacplnenlilsvsldrhfrvhdfhskkLLRKDYMQSRLTSILvrsdfslenetkkeeqehseekgdsdekydpehfemNQVTRENYAEsktnkntsdyddesdieivdeidndedkqdeseedgeeegeeeaseneyytetdedekeneeddgesdggrrrgs
Flexible Loop (DISEMBL)
mtladdyniyigsstgafkgvnlSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAvksgdvklwRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKnifsaknvshrVLVYSvkpdefdlrrpvwvngisflpnsdkvavcskqgyvrvydpkittqrrpvlkvdIPDVALScitttnqshyvIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFhskkllrkdymQSRLTsilvrsdfslenetkkeeqehseekgdsdekydpEHFEMNQvtrenyaesktnkntsdyddesdieivdeidndedkqdeseedgeeegeeeaseneyytetdedekeneeddgesdggrrrgs
Low Complexity Region (SEG)
MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLenetkkeeqehseekGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSdyddesdieivdeidndedkqdeseedgeeegeeeaseneyytetdedekeneeddgesdgGRRRGS
Disordered region (IsUnstruct)
*****DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVR***********************************************************************************************************************
Disordered Region (DISOPRED)
****DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRS**********************************************************************************************************************
Disordered Region (DISEMBL)
MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL*********************YDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDN***************************************************
Disordered Region (DISPRO)
***ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL**********************DPE****NQVTREN*************DDESDIEIVDE******************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGGRRRGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	444	2.2.26 [Sep-21-2011]
Q6RFH5	385	WD repeat-containing prot	yes	N/A	0.718	0.828	0.334	6e-47
Q58D06	385	WD repeat-containing prot	yes	N/A	0.747	0.862	0.331	3e-46
Q8VCG3	384	WD repeat-containing prot	yes	N/A	0.747	0.864	0.311	2e-44
Q54FW9	508	WD repeat-containing prot	yes	N/A	0.466	0.407	0.311	3e-19
A5DKC4	398	Ribosome biogenesis prote	N/A	N/A	0.391	0.437	0.259	1e-11
Q6CEC9	410	Ribosome biogenesis prote	yes	N/A	0.461	0.5	0.265	3e-10
A5DX41	447	Ribosome biogenesis prote	N/A	N/A	0.396	0.393	0.252	6e-10
O94698	387	Ribosome biogenesis prote	yes	N/A	0.432	0.496	0.277	6e-09
Q5A2T0	406	Ribosome biogenesis prote	N/A	N/A	0.430	0.470	0.246	7e-09
Q6BUJ2	430	Ribosome biogenesis prote	yes	N/A	0.434	0.448	0.244	1e-08

>sp|Q6RFH5|WDR74_HUMAN WD repeat-containing protein 74 OS=Homo sapiens GN=WDR74 PE=1 SV=1

 Score =  188 bits (478), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 183/338 (54%), Gaps = 19/338 (5%)

Query: 8   NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
           ++++G+ TG  KGVNL + +    N         + +V AL WG   E+++L+  + + +
Sbjct: 10  HVWVGTETGILKGVNLQRKQA--ANFTAGGQPRREEAVSALCWGTGGETQMLVGCADRTV 67

Query: 68  KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK---TEPDQWTNF 124
           K + T+   F        GEG   G+++ D  ++T V SG +++W  K   T  D     
Sbjct: 68  KHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTSSDPLLEL 127

Query: 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
            VGP +  M+ +  H +++ATGGKEN LK+WDL  ++  +F AKNV +         D  
Sbjct: 128 RVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRN---------DWL 178

Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
           DLR P+W   I FLP S K+  C+    VRVYDP  + QRRPVL+    +  L+ +T T 
Sbjct: 179 DLRVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPA-SPQRRPVLETTYGEYPLTAMTLTP 237

Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
             + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct: 238 GGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296

Query: 303 DFHSKKLL-RKDYMQSRLTSILVRSDFSLENETKKEEQ 339
              + + L  K Y++S+L  +L+    + E+E ++ ++
Sbjct: 297 RIQNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQE 334

Homo sapiens (taxid: 9606)

>sp|Q58D06|WDR74_BOVIN WD repeat-containing protein 74 OS=Bos taurus GN=WDR74 PE=2 SV=1

 Score =  186 bits (472), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 187/353 (52%), Gaps = 21/353 (5%)

Query: 8   NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
           ++++G+ TG  KGVNL + +    N         + +V AL WG   E+++L+  +   +
Sbjct: 10  HVWVGTDTGILKGVNLQRKQA--ANFTASGQPRREEAVSALCWGAGGETQILVGCADGTV 67

Query: 68  KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK---TEPDQWTNF 124
           K + T+   F        GEG   G+++ D  ++T V SG +++W  K      D     
Sbjct: 68  KHFSTEEGRFQGQRQCPGGEGTFRGLAQVDGTLITCVDSGILRVWTDKDKEASSDPVLEL 127

Query: 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
            VGP +  M+ +    +I+ATGGKEN LK+WDL  ++  +F AKNV +         D  
Sbjct: 128 RVGPGVCRMRQDPARPHIVATGGKENALKVWDLQGSEEPLFRAKNVRN---------DWL 178

Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
           DLR PVW   I FLP S K+  C+    VRVYDP  + QRRPVL+    +  L+ +T T 
Sbjct: 179 DLRVPVWDQDIQFLPESQKLVTCTGYHQVRVYDPA-SPQRRPVLEATYGEYPLTAVTLTP 237

Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
           + + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct: 238 EGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296

Query: 303 DFHSKKLL-RKDYMQSRLTSILV--RSDFSLENETKKEEQEHSEEKGDSDEKY 352
              + + L  K Y++S+L  +L+  R ++  E +  +E  +   E  ++DE +
Sbjct: 297 RIRNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQEPNKVPSEDTETDELW 349

Bos taurus (taxid: 9913)

>sp|Q8VCG3|WDR74_MOUSE WD repeat-containing protein 74 OS=Mus musculus GN=Wdr74 PE=2 SV=1

 Score =  180 bits (456), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 188/353 (53%), Gaps = 21/353 (5%)

Query: 8   NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
           ++++G+ TG  KGVNL +      N         + +V AL WG   E+++L+  + + +
Sbjct: 10  HVWVGTETGILKGVNLQRKH--AANFTPSGQPRREEAVNALCWGTGGETQILVGCADRTV 67

Query: 68  KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWR---YKTEPDQWTNF 124
           + ++ +   F +      GEG   G+++ D  ++T V SG +++W     +   D     
Sbjct: 68  RYFNAEEGTFLSQRYCPGGEGTFRGLAQADGTLITCVDSGILRVWCENDKEASSDPLLEL 127

Query: 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
            VGP +  M+ +  H++++AT GKEN LK+WDL  ++  +F AKNV +         D  
Sbjct: 128 KVGPGVCRMRQDPTHTHVVATCGKENALKVWDLQGSEEPVFRAKNVRN---------DWL 178

Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
           DLR P+W     FLP S K+  C+    VRVYDP ++ QRRPVL+    +  L+ +T T 
Sbjct: 179 DLRVPIWDQDTQFLPGSQKLVTCTGYHQVRVYDP-VSPQRRPVLEATYGEYPLTAMTLTP 237

Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
           + + VIVG+T G +  +D R +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct: 238 EGNSVIVGNTHGQLAEIDFR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296

Query: 303 DFHSKKLL-RKDYMQSRLTSILV--RSDFSLENETKKEEQEHSEEKGDSDEKY 352
              + + L  K Y++S+L  +L+  R ++  E +  +E  +   E  ++DE +
Sbjct: 297 RIRNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQEPNQVPSEDTETDELW 349

Mus musculus (taxid: 10090)

>sp|Q54FW9|Y0555_DICDI WD repeat-containing protein DDB_G0290555 OS=Dictyostelium discoideum GN=DDB_G0290555 PE=4 SV=1

 Score = 96.7 bits (239), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKP 179
           Q  + NV   L     N  ++  A GGK+ +L +WDL      +SAK           K 
Sbjct: 154 QSFSLNVATNLSGFAMNPSNDKFAFGGKDVNLTIWDLEKQVKTYSAK----------FKH 203

Query: 180 DEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT 239
           D  +L+ PV +N + ++ N DK+ + S    ++ YD +  T R   L V      +  I 
Sbjct: 204 DFLNLQEPVSINVVKYM-NDDKILIGS-DFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQ 261

Query: 240 TTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH 298
            TNQ  HY     + G +   D+R   +    +K  AG VKDIA      L+ +V LDRH
Sbjct: 262 YTNQKEHYFYASDSIGKVFCYDVRT-SRQVGSFKDSAGSVKDIAIHPTLPLLATVGLDRH 320

Query: 299 FRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSE 343
            RV++  ++K+L K +++ RL+ +L    FS E  T +  QE  E
Sbjct: 321 LRVYNLDNRKMLHKIFLKQRLSCVL----FSKEEPTNEIAQEEEE 361

Dictyostelium discoideum (taxid: 44689)

>sp|A5DKC4|NSA1_PICGU Ribosome biogenesis protein NSA1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=NSA1 PE=3 SV=2

 Score = 72.0 bits (175), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 46/220 (20%)

Query: 138 HSNIIATGGKENDLKLWD----------LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP 187
              + A GGKENDL++            L + + +F+AKNV         K D  DLR P
Sbjct: 152 QPGVFAYGGKENDLRIVKMFEVGKKVKLLESVEVLFAAKNV---------KNDHLDLRVP 202

Query: 188 VWVNGISFLP--NSDKVAVCSKQGYVRVYD------PKITTQ--RRPVLKVDIPD----- 232
           +W+  I F+   NS K+   ++ G +R+YD      P    Q    P++ ++        
Sbjct: 203 IWITKIRFISSKNSYKLITATRYGQLRIYDTNHGRKPAHDYQVCTNPIITLNFAGSNSDE 262

Query: 233 ---------VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC 283
                    VA   + + ++  +    +T GD++    R  GK  Y+  G  G +  ++C
Sbjct: 263 VIITDNRNMVARHSLVSIDKKAFKTNSATVGDIIKPVPRLLGK--YQEGGNTGAIFGVSC 320

Query: 284 PLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSIL 323
              +  + +  LDR+ RV+D  +++++ K YM S++  IL
Sbjct: 321 -FKDTFVATGGLDRYLRVYDLETREMVSKVYMGSQIADIL 359

Involved in the biogenesis of the 60S ribosomal subunit.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

>sp|Q6CEC9|NSA1_YARLI Ribosome biogenesis protein NSA1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NSA1 PE=3 SV=1

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 51/256 (19%)

Query: 127 GPQLECMKHNK--HSNIIATGGKENDLKLW------DLNTTKNIFSAKNVSHRVLVYSVK 178
           GP L C   ++  +   IA GGKE DL+++      D  T ++ F A+NV         K
Sbjct: 142 GP-LACFALDRELYPGKIAVGGKERDLEVFGWAVKGDEVTVRSEFQARNV---------K 191

Query: 179 PDEFDLRRPVWVNGISFLPNSDK----VAVCSKQGYVRVYD------PK--ITTQRRPVL 226
            +E D+R PVW++GI F   SDK    V   ++ G +RVY+      PK      + P L
Sbjct: 192 SNEIDMRVPVWISGILF-QASDKDGFRVITATRHGQIRVYETWHGKRPKWDFKVTKDP-L 249

Query: 227 KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK----------GKPCY--KYKGF 274
           +   P +  S + +++ +H         D   + L+ K            PC   K+ G 
Sbjct: 250 RTLAPGMDASNVVSSD-AHSSTFKFNFADNEKIVLKNKDNNQNKEHNRKSPCVVEKFPGS 308

Query: 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENET 334
            G V  +    N  L+ +V LDR+ R+ D  + +   K ++ ++++S+L      ++ E 
Sbjct: 309 LGAVLHLVTTDN-GLLATVGLDRYLRIFDLETTECTAKMFVGTQVSSLLF-----VDTER 362

Query: 335 KKEEQEHSEEKGDSDE 350
           K  +++H EE  + ++
Sbjct: 363 KTAQEKHVEETAEKED 378

Involved in the biogenesis of the 60S ribosomal subunit.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|A5DX41|NSA1_LODEL Ribosome biogenesis protein NSA1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=NSA1 PE=3 SV=1

 Score = 65.9 bits (159), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 54/230 (23%)

Query: 135 HNKHSNIIATGGKENDLKLWDL-NTTKN----------------IFSAKNVSHRVLVYSV 177
           H +  N++A GGKE DL++ +L N++ N                +F AKNVS+       
Sbjct: 193 HPEQENVVAFGGKETDLQIAELYNSSVNSKIFKKDYKSAFVPKILFKAKNVSN------- 245

Query: 178 KPDEFDLRRPVWVNGISFLPNSD-----KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232
             D  +LR P+W+  I F  N+      K+   ++ G +R+YD K    R+PV    +  
Sbjct: 246 --DHLNLRVPIWITNILFFTNNVTNGQYKLITSTRYGQLRIYDTK--HGRKPVKDYPVST 301

Query: 233 VALSCITTTNQSHYVIVGSTTGDMMA------VD--------------LRGKGKPCYKYK 272
             +  +   N     +V + T ++MA      +D              ++   K   KY 
Sbjct: 302 TPILTLLFGNDKETEVVLTDTQNLMAKYSLDIIDDKAFKTNSASAGDIIKPVPKLLGKYT 361

Query: 273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSI 322
           G       +A  + E ++    LDR+ RV D  S+++L K Y+   ++S+
Sbjct: 362 G-GNTGATLAQQVYEGIVAFAGLDRYLRVFDVESRQILAKVYLGVEVSSL 410

Involved in the biogenesis of the 60S ribosomal subunit.

Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (taxid: 379508)

>sp|O94698|NSA1_SCHPO Ribosome biogenesis protein nsa1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nsa1 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 89/220 (40%), Gaps = 28/220 (12%)

Query: 127 GPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-------KNIFSAKNVSHRVLVYSVKP 179
           GP      H +   IIA GGKEND+ L+  N T         ++  +NV       +VK 
Sbjct: 128 GPLSAVELHPRIPGIIAAGGKENDVCLYSCNPTCKSNIDELELWRTENVVKVFQGKNVKN 187

Query: 180 DEFDLRRPVWVNGISFLPNSDKV---------------AVCSKQGYVRVYDPKITTQRRP 224
           D  +LR  VW+ GI F  +   V               A  +  G +R YD K    RRP
Sbjct: 188 DSLNLRVRVWITGIVFTEDIINVIDGKSEDDESLCFHFATITHYGQLRFYDTK--HGRRP 245

Query: 225 VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP 284
           V   D+    LS +        +        +   D   K K   +++G  G    I C 
Sbjct: 246 VSTFDVSTSPLSHVGLLPSIKLLYFADKRAQISIFD-HSKKKVIGRFQGVKGAPSSIHCL 304

Query: 285 LNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILV 324
              N++    LDR+ R+ D   +K L   Y+++  TSI+V
Sbjct: 305 --GNVVAITGLDRNVRIFD-ADRKPLANAYIKALPTSIIV 341

Involved in the biogenesis of the 60S ribosomal subunit.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5A2T0|NSA1_CANAL Ribosome biogenesis protein NSA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NSA1 PE=3 SV=1

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 40/231 (17%)

Query: 124 FNVGPQLECMKHNKHSNIIATGGKENDLKLWDL---NTTKNIFSAKNVSHRV---LVY-- 175
           F + PQ E        NI+A GGKE+DL++  L   N    +F   N  +     +++  
Sbjct: 148 FAINPQAE--------NIVALGGKEHDLQILQLFNKNINSTVFKKNNYENEFKPQIIFKA 199

Query: 176 -SVKPDEFDLRRPVWVNGISFLPNSD--KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232
            +V+ D  +LR P+W+  I F   +   K+   ++ G +R+YD      R+P     + +
Sbjct: 200 KNVRNDHLELRVPIWITNILFAKAAKGYKLVTSTRYGQIRLYDT--AEGRKPRKDYKVTE 257

Query: 233 VALSCITTTNQSHYVIVGSTTGDMMA------VDLRGKG----------KPCYKYKG-FA 275
             +  +T  N     I+ + T  ++A      VD +             KP  K  G F 
Sbjct: 258 KPIVTLTFANDEQTEIIVTDTHSLIAKYSLTQVDEKAFKTISASAGEIVKPVPKLLGKFT 317

Query: 276 G--CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILV 324
           G            E ++    LDR+ RV D  S+++L K Y+   ++++L+
Sbjct: 318 GGNTGATFGVHAYERIVAFAGLDRYLRVFDLESREILAKVYLGVEVSALLI 368

Involved in the biogenesis of the 60S ribosomal subunit.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

>sp|Q6BUJ2|NSA1_DEBHA Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NSA1 PE=3 SV=1

 Score = 61.6 bits (148), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 36/229 (15%)

Query: 130 LECMKHNKH-SNIIATGGKEND---LKLWDLNTTKNIFSAKNVSHRV---LVYS---VKP 179
           +    +N H + + A GGKEND   ++L++   TK++F A+N        ++++   VK 
Sbjct: 142 ISAFINNPHEAGVFACGGKENDARIIRLFEGEITKDVFEAENKQEFFQPDVIFTARNVKN 201

Query: 180 DEFDLRRPVWVNGISFLPNSD----KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVAL 235
           D  DLR P+W++ I F         K    ++ G VR+YD   T  +RP+    + +  +
Sbjct: 202 DHLDLRPPIWISSILFFEEKPKDGYKFLTSTRYGQVRIYDT--THGKRPIQDYKVCEKPI 259

Query: 236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGFAGCVKDIACPL--------N 286
             +   +    VIV  T   +    L       +K +   AG +      L        N
Sbjct: 260 VTLNFADSEEEVIVSDTHNLVAKYSLAQIDSKAFKTHSASAGEITKPVSKLLGKFSAGGN 319

Query: 287 ENLILSVS-----------LDRHFRVHDFHSKKLLRKDYMQSRLTSILV 324
              I+ V+           LDR+ R +D  S+++L K Y+  +++ +L+
Sbjct: 320 TGAIVGVNIFDDEIISTGGLDRYLRTYDISSREILAKVYLGVQISDVLM 368

Involved in the biogenesis of the 60S ribosomal subunit.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	444
383862357	428	PREDICTED: WD repeat-containing protein	0.765	0.794	0.416	1e-75
350400052	422	PREDICTED: WD repeat-containing protein	0.898	0.945	0.377	8e-73
328792013	400	PREDICTED: WD repeat-containing protein	0.837	0.93	0.395	9e-72
340727922	423	PREDICTED: LOW QUALITY PROTEIN: WD repea	0.898	0.943	0.375	1e-71
321477061	384	hypothetical protein DAPPUDRAFT_311532 [	0.718	0.830	0.410	4e-71
380017075	424	PREDICTED: LOW QUALITY PROTEIN: WD repea	0.833	0.872	0.388	3e-70
307211275	414	WD repeat-containing protein 74 [Harpegn	0.754	0.809	0.384	1e-65
242019376	354	WD-repeat protein, putative [Pediculus h	0.770	0.966	0.365	3e-61
345479871	306	PREDICTED: WD repeat-containing protein	0.680	0.986	0.398	1e-58
291224117	366	PREDICTED: MGC89952 protein-like [Saccog	0.736	0.893	0.390	1e-58

>gi|383862357|ref|XP_003706650.1| PREDICTED: WD repeat-containing protein 74-like [Megachile rotundata]

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/372 (41%), Positives = 226/372 (60%), Gaps = 32/372 (8%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M + D+++IY+G  +G FKGV + + + +++NIQN+  IT+   +  ++WG+ EE E+LI
Sbjct: 1   MDVKDNFDIYVGGKSGVFKGVKIGQQENVMQNIQNLVSITDHDEITTMSWGDTEEKEVLI 60

Query: 61  AYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
           A      + IK+YDT+   F  +   + G G I G+SRYD  ILTAVKSG++KLWR+K E
Sbjct: 61  ACGVKGIRSIKVYDTECSTFTCSFFCNIGTGKINGISRYDGAILTAVKSGEIKLWRFKEE 120

Query: 118 PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            +       G  L  M+H+K + NIIATGG E++LKL+DL   K IF  KN+ H      
Sbjct: 121 DE--IIIKAGENLNRMRHSKINKNIIATGGYEHNLKLFDLEKQKQIFIEKNMPH------ 172

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
              D   LR P+W++ I FLP ++++    + G+VR+YDP++  QRRPV+ +++ D AL+
Sbjct: 173 ---DWLQLRVPIWISDIEFLPGTEQIVTVGRFGHVRLYDPRV--QRRPVINLEMKDEALT 227

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
            ++T  +   VIVGS  G M  VDLR   K    YKGF G V  IAC  NE  ++SVSLD
Sbjct: 228 TLSTMPREKQVIVGSGKGSMNLVDLRKPAKALNTYKGFVGSVTGIACSTNEPYVVSVSLD 287

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETK---------------KEEQEH 341
           R+ R+H   +KKLL+K Y+ SR++ +L+RS FSL  E                 KEEQE+
Sbjct: 288 RYLRIHHIDTKKLLKKVYLTSRMSCMLLRSGFSLPTEKTNEESIRKRTDIDERFKEEQEN 347

Query: 342 SEEKGDSDEKYD 353
            +   D+D +YD
Sbjct: 348 IQRDSDTDSEYD 359

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400052|ref|XP_003485722.1| PREDICTED: WD repeat-containing protein 74-like [Bombus impatiens]

 Score =  280 bits (717), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 163/432 (37%), Positives = 250/432 (57%), Gaps = 33/432 (7%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M+  D+Y+IY+G  +G FKGV + K +C  +NIQN+  IT+   V  ++WG+ EE E+LI
Sbjct: 1   MSRKDNYDIYVGGKSGIFKGVRVDKKQCTSQNIQNLASITDNDEVTTMSWGDDEEREILI 60

Query: 61  AYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
           A      + IK+YDTD   F  +   + G G I G+SRY+E IL+AV+SG++KLWR+  +
Sbjct: 61  ACGVKDIRSIKVYDTDCSTFTCSFFCNIGAGKITGISRYNEAILSAVQSGEIKLWRF--Q 118

Query: 118 PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            D +   N G  L+ M+H++ +  IIATGG+E+ LKL+D+     IF  KNV        
Sbjct: 119 EDGFL-MNAGKNLDKMRHSRINKQIIATGGQEHALKLFDIEKQTQIFIEKNVP------- 170

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
             PD   LR P+W++ I FLP ++++   SK GYVR+YDPK  +QRRPV+ V++ + AL+
Sbjct: 171 --PDWLQLRVPIWISDIDFLPGTEEIVTTSKYGYVRLYDPK--SQRRPVINVEVKNEALT 226

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
            +T   Q   +IVGS  G M  +DLR   K    YKG  G V  IAC   E  I+SV LD
Sbjct: 227 TLTVVPQKRQIIVGSGKGIMNLIDLRKPAKVLNTYKGSVGAVTGIACSKIEPYIISVGLD 286

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356
           R  ++H  ++K+LLRK Y+ S+++ +L+RS+FS    T KE  E + ++           
Sbjct: 287 RFLQIHHMNTKELLRKVYLTSKISCMLLRSEFSF--ATNKEVNEENTQQCK--------- 335

Query: 357 FEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASEN 416
              N+ T+    + +T ++ SD D E D+ + +++    +K+D S E  + +      +N
Sbjct: 336 ---NKTTKNFQGKQQTMQSNSDSDSEYDM-LFEKMPVISNKEDRSMERKQRKTNPSRLDN 391

Query: 417 EYYTETDEDEKE 428
           E  +   E  K+
Sbjct: 392 EIISRKHELRKD 403

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792013|ref|XP_001120550.2| PREDICTED: WD repeat-containing protein 74 [Apis mellifera]

 Score =  277 bits (708), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 246/400 (61%), Gaps = 28/400 (7%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M++ D++N+Y+G  +G FKGV + K++ +I+NIQN+  IT+   V +++WG+ +E E+LI
Sbjct: 1   MSVKDNFNVYVGGKSGIFKGVKIEKEEYLIENIQNLISITDNDEVTSMSWGDDDEREILI 60

Query: 61  AYSGQKI---KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
               + I   K+YD+    F  +   + G G I G+SRYDE ILTAVKSG+VKLWR+K E
Sbjct: 61  GCGVKDIRSVKVYDSGCSTFTCSFFCNIGTGKITGISRYDEAILTAVKSGEVKLWRFK-E 119

Query: 118 PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            D +     G  L+ M+H+K + ++IATGG+E++LKL+D+     IF  KNV+H      
Sbjct: 120 EDGFI-IKAGENLDKMRHSKINKHVIATGGQEHELKLFDIERKTRIFLEKNVAH------ 172

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
              D   LR P+W++ I FLP+++++    + G+VR+YDPK+  QRRP++ V++ D  L+
Sbjct: 173 ---DWLQLRVPIWISDIDFLPHTEQIVTVGRYGHVRLYDPKV--QRRPIINVEMKDEILT 227

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
            ++   Q   +IVG+  G M  VDLR   K    YKGF G V  IAC   E  I+SVSLD
Sbjct: 228 TLSVVPQQKQIIVGTGKGKMNLVDLRKPAKVLNTYKGFVGGVTGIACSTVEPYIISVSLD 287

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356
           R+ R+H  ++K+LL+K Y+ S+++ +++RSDFS   +   E  E S +K +     + E+
Sbjct: 288 RYLRIHHINTKQLLKKIYLTSKISCMVLRSDFSFSKDN--ENNEQSIQKCNK----NIEN 341

Query: 357 FEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDED 396
           FE+ +  +EN    +TN   SD + +   E +  I N ED
Sbjct: 342 FEVKK--QENI---QTNLEYSDSEYDMLFEKMQVISNTED 376

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727922|ref|XP_003402282.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 74-like [Bombus terrestris]

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/431 (37%), Positives = 245/431 (56%), Gaps = 32/431 (7%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M+  D+Y+IY+G  +G FKGV + K +CI +NIQN+  ITN   V  ++WG+ EE E+LI
Sbjct: 1   MSTKDNYDIYVGGKSGIFKGVRVDKKQCISQNIQNLISITNNDEVTTMSWGDDEEREILI 60

Query: 61  AYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
           A      + IK+YDTD   F  +   + G G I G+SRY+E IL+AV+SG++KLWR++ E
Sbjct: 61  ACGVKDIRSIKVYDTDCSTFTCSFFCNIGAGKITGISRYNEAILSAVQSGEIKLWRFE-E 119

Query: 118 PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            D +   N G  L+ M+H++ +  IIATGG+E+ LKL+D+     IF  KNV        
Sbjct: 120 EDGFL-MNAGKNLDKMRHSRINKQIIATGGQEHALKLFDIEKQTQIFIEKNVP------- 171

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
             PD   LR P+W++ I FLP ++++   SK GYVR+YDPK  +QRRPV+ V++ + +++
Sbjct: 172 --PDWLQLRVPIWISDIDFLPGTEEIVTTSKYGYVRLYDPK--SQRRPVINVEVKECSIN 227

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
                     +IVGS  G M  +DLR   K    YKG  G V  IAC   E  I+SV LD
Sbjct: 228 NFNCGATKRQIIVGSGKGTMNLIDLRKPAKVLNTYKGSVGAVTGIACSRIEPYIVSVGLD 287

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356
           R  ++H  ++K+LLRK Y+ S+++ +L+RS+FS     +  E+   + K           
Sbjct: 288 RFLQIHHINTKELLRKVYLTSKISCMLLRSEFSFAINKEVNEEMTQQCK----------- 336

Query: 357 FEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASEN 416
              N+ T+    + +T +N SD D E D+ + D++    +K+D S E  + +      +N
Sbjct: 337 ---NKTTKNFQGKQQTIQNNSDSDSEYDM-LFDKMPVISNKEDRSIEKRQRKANPSRLDN 392

Query: 417 EYYTETDEDEK 427
           E      E  K
Sbjct: 393 EIIFRKHELRK 403

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321477061|gb|EFX88020.1| hypothetical protein DAPPUDRAFT_311532 [Daphnia pulex]

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 214/334 (64%), Gaps = 15/334 (4%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M+   D+N+Y+G+ TG FKGVN +  + I KN+ +++ +  +  +  + WGN EESE+L+
Sbjct: 1   MSSTQDFNVYVGAETGLFKGVNFNNQQTIAKNLNSLQSLDRQQEITCMAWGNEEESEILL 60

Query: 61  AYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD- 119
              GQK+KIYD++FK F+   +  FG+G + GV + +E I+TA +SGDVKLW++K+    
Sbjct: 61  GLRGQKVKIYDSEFKGFSGCVETPFGKGPLRGVGKLNESIITASESGDVKLWKFKSSQQV 120

Query: 120 QWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDL-NTTKNIFSAKNVSHRVLVYSV 177
           ++   N G +L CM+ +  + NI+ATGGK+NDL+LWD+ N+   +F AKN         V
Sbjct: 121 EFHALNTGERLCCMRLSPFTKNIVATGGKKNDLQLWDMENSQHPVFKAKN---------V 171

Query: 178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK-VDIPDVALS 236
           K D  DL  P+WV+ ++F+ NS+++A  S+ G+VR+YDPK +  RRPV+  V   D A +
Sbjct: 172 KNDFLDLPVPIWVSDLAFVRNSEQIATSSRHGFVRLYDPK-SRGRRPVISCVPEADEAWT 230

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
           CIT  ++ + VIVGS  G M+  D R + K  + Y+GF G ++ + C   + L++SV LD
Sbjct: 231 CITIASRPNQVIVGSGKGRMLLFDFR-QQKVVHAYRGFTGSIRQMVCHPTKPLVVSVGLD 289

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL 330
           R  RVH    +  L K Y++SRL ++L+R DF +
Sbjct: 290 RFVRVHHLDRQAPLHKSYLKSRLNAVLMRQDFGV 323

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017075|ref|XP_003692491.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 74-like, partial [Apis florea]

 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 156/402 (38%), Positives = 243/402 (60%), Gaps = 32/402 (7%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M++ D++N+Y+G  +G FKGV + K++ +I+NIQN+  IT+   V +++WG+ +E E+LI
Sbjct: 1   MSVKDNFNVYVGGKSGIFKGVKIEKEEYLIENIQNLISITDNDEVTSMSWGDDDEREILI 60

Query: 61  AYSGQKI---KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
               + I   K+YD++   F  +   + G G I G+SRYDE ILTAVKSG+VKLWR+K E
Sbjct: 61  GCGVKDIRSVKVYDSECSTFTCSFFCNIGTGKITGISRYDEAILTAVKSGEVKLWRFK-E 119

Query: 118 PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            D +     G  L+ M+H+K   ++IATGG+E++LKL+D+     IF  KNV+       
Sbjct: 120 EDGFI-IRAGENLDKMRHSKIXKHVIATGGQEHELKLFDIERQTRIFLEKNVA------- 171

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
              D   LR P+W++ I FLP +D++    + G+VR+YDPK+  QRRP++ +++ D  L+
Sbjct: 172 --LDWLQLRVPIWISDIDFLPYTDEIVTVGRYGHVRLYDPKV--QRRPIINIEMKDEILT 227

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
            ++   Q   +IVG+  G M  VDLR   K    YKGF G V  IAC   E  I+SVSLD
Sbjct: 228 TLSVVPQQKQIIVGTGKGKMNLVDLRKPAKVLNTYKGFVGGVTGIACSTVEPYIISVSLD 287

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP-- 354
           R+ R+H  ++K+LL+K Y+ S+++ +++RS+FS     +  EQ        S  KY+   
Sbjct: 288 RYLRIHHINTKQLLKKIYLTSKISCMVLRSEFSFSKNNEINEQ--------STHKYNKNI 339

Query: 355 EHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDED 396
           ++FE+ +  +EN    +TN   SD + +   E +  I N ED
Sbjct: 340 KNFEVKK--QENI---QTNLECSDSEYDMLFEKMQVISNTED 376

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211275|gb|EFN87461.1| WD repeat-containing protein 74 [Harpegnathos saltator]

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 135/351 (38%), Positives = 215/351 (61%), Gaps = 16/351 (4%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M+  D++N+++G   G FKG+ + K   IIKNIQ++  IT    V  ++WG+ +E ++LI
Sbjct: 1   MSYKDNFNVFVGGKLGVFKGIKIEKKANIIKNIQDLASITGNDQVTTISWGDDDEKDVLI 60

Query: 61  AYS---GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
           A      +++KIYD++   F  +   + G+G I G+SRY+  ILTAV SG+V LWR +T+
Sbjct: 61  ACGEKEDRRVKIYDSENSAFIHSFLCNTGKGSINGISRYNGSILTAVNSGEVSLWR-QTD 119

Query: 118 PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            +     N G  L  M H+    N+IATGG+E+ LKL+DL     IF+ KNV H      
Sbjct: 120 KEGELLINAGENLNRMCHSHVQRNVIATGGREHILKLYDLEKQVMIFNEKNVRH------ 173

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
              D  +L+ PVW++ ++FL  + ++A   + G++R+YDP+   QRRPV+ +   D + +
Sbjct: 174 ---DWLELKVPVWISDMNFLSGAQQIATVGRYGHIRLYDPR--AQRRPVVNITYQDESFT 228

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
           C+  T++  ++I GS  G +  VDLR  GK    YKGFAG V  +AC ++   I SVSLD
Sbjct: 229 CMCVTSKEKHIIAGSGKGKLNLVDLRKPGKILNTYKGFAGGVTGVACSMSNPYIASVSLD 288

Query: 297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGD 347
           R+ R+H   +K+LL+  Y+ S+LT + +RSDFS+E +++K  +  ++ + D
Sbjct: 289 RYLRIHHIDTKQLLKNIYLTSKLTCLAMRSDFSIETDSEKNPEVTTKSRSD 339

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242019376|ref|XP_002430137.1| WD-repeat protein, putative [Pediculus humanus corporis] gi|212515228|gb|EEB17399.1| WD-repeat protein, putative [Pediculus humanus corporis]

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 210/361 (58%), Gaps = 19/361 (5%)

Query: 6   DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ 65
           D+NI++   TGAFKG+ + ++  ++KN+QNV+ +   + +  LNWG+  E+E+LI    Q
Sbjct: 10  DFNIFVAGKTGAFKGIKVEENAAVVKNLQNVEILKPDSEISILNWGDNNETEILIGTVNQ 69

Query: 66  KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKT--EPDQWTN 123
            +KIYD DFK ++T+ +  FG G IVG++R +  I T  KSG +K+W+ K   E +  T 
Sbjct: 70  IVKIYDIDFKAYSTSMEAKFGTGSIVGLTRINGSITTCSKSGHIKIWKCKKTEELELITE 129

Query: 124 FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD 183
            NV    +C   +    II  GG++NDLKLWD+N    +F AKN         VK D  +
Sbjct: 130 GNVSKMKKCPNRD---GIIGLGGEKNDLKLWDVNKKCKVFCAKN---------VKKDSLE 177

Query: 184 LRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
           L  P+WV  ++FLPN++  VAV ++ G++R+YD K   QRRPV+ + + + + + I+  N
Sbjct: 178 LEIPIWVTDLTFLPNNENLVAVSTRHGHIRLYDTK--AQRRPVVNITVENQSFNAISLCN 235

Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
            ++ V+VGSTTG +M  D R K K  ++YKG  G ++D+          SV LDR+ R+H
Sbjct: 236 NNNQVVVGSTTGHLMVADFREK-KVVHRYKGPIGSIRDVYAHSELPYFASVGLDRYLRIH 294

Query: 303 DFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQV 362
              +++LL + Y++ RL  +L+ S +  +N    E+Q       +SD +Y+     M   
Sbjct: 295 HLETRRLLHEQYLKVRLNCVLMTSAYG-KNSDINEDQNIECVDLESDNEYNELFSNMESF 353

Query: 363 T 363
           T
Sbjct: 354 T 354

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345479871|ref|XP_003424046.1| PREDICTED: WD repeat-containing protein 74-like, partial [Nasonia vitripennis]

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 190/319 (59%), Gaps = 17/319 (5%)

Query: 1   MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI 60
           M+  D++N+++G  +G FKGV + +  C++KNIQN+  IT+   V  + WG+ +E E+L+
Sbjct: 1   MSFKDNFNVFVGGKSGIFKGVRVKEKSCVMKNIQNLVSITDDHEVSCMTWGDDDEKEILV 60

Query: 61  AYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE 117
                  + +K YDT+  +F T+     GEG+I G++RY+  ILTAV+SG +KLWR K E
Sbjct: 61  GCGSKGVRSVKTYDTENHSFKTSFVCELGEGNITGIARYNGNILTAVQSGQIKLWRQK-E 119

Query: 118 PDQWTNFNVGPQLECMKHN-KHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176
            +++   N G  L  M+   +  N+IATGG EN LKLWDLN   N F+AKNVSH      
Sbjct: 120 KEEFL-LNAGEHLLRMRQAIQQKNVIATGGLENPLKLWDLNKKVNTFTAKNVSH------ 172

Query: 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236
              D   LR P+ V  + FL N+ +V    + G++R+YD K   QRRPV+ +++ + +L+
Sbjct: 173 ---DWLQLRVPIGVADLCFLTNNKQVVTVGRYGHIRLYDTK--AQRRPVVNLEMKEESLT 227

Query: 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD 296
            ++T      V+ G+  G M  VDLR  GK    YKG  G V  +A    ++ I+S S D
Sbjct: 228 TVSTCADDRQVVCGTGRGRMNLVDLRKTGKILNTYKGPVGAVTSVAVSKMDSCIVSTSFD 287

Query: 297 RHFRVHDFHSKKLLRKDYM 315
           R+  +HD  SKKLL+K Y+
Sbjct: 288 RYLYIHDVESKKLLKKVYL 306

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291224117|ref|XP_002732053.1| PREDICTED: MGC89952 protein-like [Saccoglossus kowalevskii]

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/351 (39%), Positives = 201/351 (57%), Gaps = 24/351 (6%)

Query: 4   ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS 63
           A   N++IG+ TG  KGVNL  D+    N  NV  ++    + A+ W N +++++ I   
Sbjct: 3   AHKNNVWIGAETGILKGVNL--DEKTASNYSNVASLSKDEEITAICWANEQQTQVCIGQR 60

Query: 64  GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN 123
              +K +D +  ++    D + GEG   G++  D  ++T  +SG +K+W  K EP++ T 
Sbjct: 61  NHIVKTFDVELGDYIRENDCTGGEGTFQGIANVDNHLITCTQSGLLKIW--KEEPEECTE 118

Query: 124 FNVGPQLECMKHN-KHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDE 181
            +VG  +  M+ N ++ N+++TGGKENDLK+WDL  +K  +F AKNV         + D 
Sbjct: 119 IDVGKDISRMRINPENKNLVSTGGKENDLKIWDLENSKVPVFKAKNV---------RNDF 169

Query: 182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI---PDVALSCI 238
            DLR PVWV  + F+P S K+  CS+   VRVYDP  T QRRPVL ++    P +ALS I
Sbjct: 170 LDLRVPVWVCDMQFIPGSSKIVSCSRHHCVRVYDPS-TPQRRPVLNIEFDEYPVMALSLI 228

Query: 239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH 298
             TN   YVIVG++ G M  +DLR KG     +KGFAG ++DI C   E L+ S  LDRH
Sbjct: 229 PNTN---YVIVGNSQGRMGKIDLR-KGLVHKIFKGFAGSIRDIECHQTEPLVASCGLDRH 284

Query: 299 FRVHDFHSKKLLRKDYMQSRLTSILVRS-DFSLENETKKEEQEHSEEKGDS 348
            R+H+ H+  L  K Y++SRL  +L  S D     ET+   ++   E GD+
Sbjct: 285 LRIHNVHTSVLEHKVYLKSRLNCLLFSSKDLCRMEETEDTNKKRKAESGDN 335

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	444
ZFIN|ZDB-GENE-060929-1138	375	wdr74 "WD repeat domain 74" [D	0.682	0.808	0.365	5.4e-47
UNIPROTKB|E2R2B7	383	WDR74 "Uncharacterized protein	0.684	0.793	0.343	1.3e-43
UNIPROTKB|I3LD53	385	WDR74 "Uncharacterized protein	0.684	0.789	0.337	2.2e-43
UNIPROTKB|Q6RFH5	385	WDR74 "WD repeat-containing pr	0.684	0.789	0.343	1.2e-42
WB|WBGene00011538	431	T06E6.1 [Caenorhabditis elegan	0.686	0.707	0.312	2.5e-42
UNIPROTKB|Q58D06	385	WDR74 "WD repeat-containing pr	0.684	0.789	0.343	5.2e-42
MGI|MGI:2147427	384	Wdr74 "WD repeat domain 74" [M	0.684	0.791	0.321	3.3e-40
RGD|1582881	366	Wdr74 "WD repeat domain 74" [R	0.666	0.808	0.322	2.1e-38
FB|FBgn0033059	419	CG7845 [Drosophila melanogaste	0.691	0.732	0.300	4.3e-38
UNIPROTKB|E9PS41	328	WDR74 "WD repeat-containing pr	0.576	0.780	0.351	4.4e-36

ZFIN|ZDB-GENE-060929-1138 wdr74 "WD repeat domain 74" [Danio rerio (taxid:7955)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 118/323 (36%), Positives = 177/323 (54%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             +I++GS TG  KGV+L K +    N   +  ++    V  + WG+  ESELL+      +
Sbjct:     9 SIWLGSETGILKGVSLRKKQAF--NFCEMSCLSRDQEVCVMAWGDPYESELLLGSVNGTV 66

Query:    68 KIYDTDFKNFNTNTDVSF-GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV 126
             K + TD   F    +     +G   G++  D  ++T V+SG +K+W+ +   D     NV
Sbjct:    67 KTFSTDKGIFTATKECGDPSQGKFTGLAVTDSSMITCVESGLLKVWK-EGSTDT-VEVNV 124

Query:   127 GPQLECMKHNKHS-NIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDL 184
             G  +  M+ N+   + +ATGGKEN LK+WDL    K IF+AKNV+H         D  ++
Sbjct:   125 GKDICKMRQNQSQRHHVATGGKENPLKVWDLEKPDKPIFTAKNVAH---------DWLEM 175

Query:   185 RRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS 244
             R PVWV  ISF+ +SDK+  C+    VRVYDP  T QRRPVL+ D  +  L+ ++     
Sbjct:   176 RVPVWVRDISFIADSDKIVTCTGHHKVRVYDPS-TPQRRPVLEADFGEYPLTALSLPASQ 234

Query:   245 HYVIVGSTTGDMMAVDLR-GKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD 303
               V+VG+T G++  +DLR G  + C+K  G AG V+ + C  +  L+ S  LDR  RVH 
Sbjct:   235 DAVVVGNTHGELAILDLRKGLVRGCFK--GLAGAVRGLQCHPSLPLVASCGLDRFLRVHS 292

Query:   304 FHSKKLLRKDYMQSRLTSILVRS 326
                + L  K Y++SRL  +L+ S
Sbjct:   293 LEDRSLQHKVYLKSRLNCVLLSS 315

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2R2B7 WDR74 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 111/323 (34%), Positives = 176/323 (54%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             ++++G+ TG  KGVNL + +    N         + +V AL WG   E+++L+  + + +
Sbjct:    11 HVWVGTETGILKGVNLQRKQAA--NFTAAGQPRREEAVSALCWGAGGETQILVGCADRTV 68

Query:    68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRY---KTEPDQWTNF 124
             + + T+   F        GEG   G+++ D  ++T V SG V++WR    +   D     
Sbjct:    69 RFFSTEEGRFQGQKHCPGGEGTFRGLAQVDSTLITCVDSGIVRVWRENDKEASSDPLLEL 128

Query:   125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
             +VGP +  M+ +  H +++ATGGKEN LK+WDL  ++  +F AKNV +         D  
Sbjct:   129 SVGPGVCRMRQDPAHPHMVATGGKENALKVWDLQGSEEPVFRAKNVRN---------DWL 179

Query:   183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
             DLR P+W   I FLP S K+  C+    VRVYDP  + QRRPVL+V   +  L  +T T 
Sbjct:   180 DLRVPIWDQDIQFLPESQKLVTCTGYHQVRVYDPA-SPQRRPVLEVTYGEYPLMAMTLTP 238

Query:   243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
               + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct:   239 GGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 297

Query:   303 DFHSKK-LLRKDYMQSRLTSILV 324
                + + L  K Y++S+L  +L+
Sbjct:   298 RIQNPRGLEHKVYLKSQLNCLLL 320

GO:0016070 "RNA metabolic process" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0001825 "blastocyst formation" evidence=IEA

UNIPROTKB|I3LD53 WDR74 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 109/323 (33%), Positives = 177/323 (54%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             ++++G+ TG  KGVNL + + +  N         + +V AL WG   E+++L+  + + +
Sbjct:    10 HVWVGTDTGILKGVNLQRKQAV--NYTAAGQPQREEAVSALCWGAGGETQILVGCADRTV 67

Query:    68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWR---YKTEPDQWTNF 124
             K++ T+   F        GEG   G+++ D  ++T V+SG +++W     +   D     
Sbjct:    68 KLFSTEEGRFQGQRHCPGGEGTFRGLAQVDGTLITCVESGILRVWHDNDKEASSDPLLEL 127

Query:   125 NVGPQLECMKHN-KHSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
              VGP +  M+ +    +++ATGGKEN LK+WDL  ++  +F AKNV +         D  
Sbjct:   128 RVGPGVCRMRQDPSRPHVVATGGKENALKVWDLQGSEEPVFKAKNVRN---------DWL 178

Query:   183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
             DLR P+W   I FLP S K+  C+    VRVYDP  + QRRPVL+    +  L+ +T T 
Sbjct:   179 DLRVPIWDQDIQFLPESQKLVTCTGYHQVRVYDPA-SPQRRPVLEATYGEYPLTAMTLTP 237

Query:   243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
             + + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S  LDR  RVH
Sbjct:   238 EGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRVH 296

Query:   303 DFHSKK-LLRKDYMQSRLTSILV 324
                + + L  K Y++S+L  +L+
Sbjct:   297 RIRNPRGLEHKVYLKSQLNCLLL 319

GO:0016070 "RNA metabolic process" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0001825 "blastocyst formation" evidence=IEA

UNIPROTKB|Q6RFH5 WDR74 "WD repeat-containing protein 74" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 111/323 (34%), Positives = 175/323 (54%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             ++++G+ TG  KGVNL + +    N         + +V AL WG   E+++L+  + + +
Sbjct:    10 HVWVGTETGILKGVNLQRKQAA--NFTAGGQPRREEAVSALCWGTGGETQMLVGCADRTV 67

Query:    68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK---TEPDQWTNF 124
             K + T+   F        GEG   G+++ D  ++T V SG +++W  K   T  D     
Sbjct:    68 KHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTSSDPLLEL 127

Query:   125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
              VGP +  M+ +  H +++ATGGKEN LK+WDL  ++  +F AKNV +         D  
Sbjct:   128 RVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRN---------DWL 178

Query:   183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
             DLR P+W   I FLP S K+  C+    VRVYDP  + QRRPVL+    +  L+ +T T 
Sbjct:   179 DLRVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPA-SPQRRPVLETTYGEYPLTAMTLTP 237

Query:   243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
               + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct:   238 GGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296

Query:   303 DFHSKK-LLRKDYMQSRLTSILV 324
                + + L  K Y++S+L  +L+
Sbjct:   297 RIQNPRGLEHKVYLKSQLNCLLL 319

GO:0001825 "blastocyst formation" evidence=IEA

GO:0016070 "RNA metabolic process" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00011538 T06E6.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 101/323 (31%), Positives = 176/323 (54%)

Query:    10 YIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKAS-VLALNWGNVEESELLIAYSGQKIK 68
             Y+G++TGA KG  L ++    +N+  +K +  K+  + ++ W + +++E+LIA   + ++
Sbjct:     4 YVGATTGALKGAILKENT--FQNLNEIKSLDPKSDEITSMIWNDEQQTEILIARVNRDLQ 61

Query:    69 IYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP-DQWTNFNVG 127
             +   +     +   V+ G G I G+ + DE I+T V+SG++++W  K+E   +W     G
Sbjct:    62 LLGIEENELVSILTVTGGTGPIKGLHKADEKIVTCVESGELQIWNDKSEILSEW---KTG 118

Query:   128 PQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP 187
             P +  M+ +     I TGG +N LK W+L T +  +SAKNV          PD   L  P
Sbjct:   119 PGVAVMRGSTEKPEIVTGGMKNLLKTWNLETGQQTWSAKNVP---------PDMLGLEIP 169

Query:   188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV 247
             + +    F+P  + +   +K   +R+YDP+   QRRPV K+   +  + C + T +++ +
Sbjct:   170 IMITDARFIPGQNTILEATKLHEMRLYDPR--AQRRPVKKIPFMENPIMCTSLTYKTNQI 227

Query:   248 IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK 307
             +  ++ G+M   DLR K  P  K+KG AG ++ I       L  SV +DR  RVHD  S+
Sbjct:   228 LAANSIGEMGLFDLRSKVHPMCKFKGQAGSIRSITAHPTLPLAASVGIDRFLRVHDLQSR 287

Query:   308 KLLRKDYMQSRLTSILVRSDFSL 330
             KL+ K Y ++RL  +L+R + S+
Sbjct:   288 KLIHKIYCKTRLNRVLLRDNLSI 310

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|Q58D06 WDR74 "WD repeat-containing protein 74" [Bos taurus (taxid:9913)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 111/323 (34%), Positives = 174/323 (53%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             ++++G+ TG  KGVNL + +    N         + +V AL WG   E+++L+  +   +
Sbjct:    10 HVWVGTDTGILKGVNLQRKQAA--NFTASGQPRREEAVSALCWGAGGETQILVGCADGTV 67

Query:    68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP---DQWTNF 124
             K + T+   F        GEG   G+++ D  ++T V SG +++W  K +    D     
Sbjct:    68 KHFSTEEGRFQGQRQCPGGEGTFRGLAQVDGTLITCVDSGILRVWTDKDKEASSDPVLEL 127

Query:   125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
              VGP +  M+ +    +I+ATGGKEN LK+WDL  ++  +F AKNV +         D  
Sbjct:   128 RVGPGVCRMRQDPARPHIVATGGKENALKVWDLQGSEEPLFRAKNVRN---------DWL 178

Query:   183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
             DLR PVW   I FLP S K+  C+    VRVYDP  + QRRPVL+    +  L+ +T T 
Sbjct:   179 DLRVPVWDQDIQFLPESQKLVTCTGYHQVRVYDPA-SPQRRPVLEATYGEYPLTAVTLTP 237

Query:   243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
             + + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct:   238 EGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296

Query:   303 DFHSKK-LLRKDYMQSRLTSILV 324
                + + L  K Y++S+L  +L+
Sbjct:   297 RIRNPRGLEHKVYLKSQLNCLLL 319

GO:0005730 "nucleolus" evidence=IEA

GO:0016070 "RNA metabolic process" evidence=IEA

GO:0001825 "blastocyst formation" evidence=IEA

MGI|MGI:2147427 Wdr74 "WD repeat domain 74" [Mus musculus (taxid:10090)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 104/323 (32%), Positives = 174/323 (53%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             ++++G+ TG  KGVNL +      N         + +V AL WG   E+++L+  + + +
Sbjct:    10 HVWVGTETGILKGVNLQRKHAA--NFTPSGQPRREEAVNALCWGTGGETQILVGCADRTV 67

Query:    68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLW---RYKTEPDQWTNF 124
             + ++ +   F +      GEG   G+++ D  ++T V SG +++W     +   D     
Sbjct:    68 RYFNAEEGTFLSQRYCPGGEGTFRGLAQADGTLITCVDSGILRVWCENDKEASSDPLLEL 127

Query:   125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
              VGP +  M+ +  H++++AT GKEN LK+WDL  ++  +F AKNV +         D  
Sbjct:   128 KVGPGVCRMRQDPTHTHVVATCGKENALKVWDLQGSEEPVFRAKNVRN---------DWL 178

Query:   183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
             DLR P+W     FLP S K+  C+    VRVYDP ++ QRRPVL+    +  L+ +T T 
Sbjct:   179 DLRVPIWDQDTQFLPGSQKLVTCTGYHQVRVYDP-VSPQRRPVLEATYGEYPLTAMTLTP 237

Query:   243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
             + + VIVG+T G +  +D R +G+     KG AG V+ + C  ++ L+ S  LDR  R+H
Sbjct:   238 EGNSVIVGNTHGQLAEIDFR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296

Query:   303 DFHSKK-LLRKDYMQSRLTSILV 324
                + + L  K Y++S+L  +L+
Sbjct:   297 RIRNPRGLEHKVYLKSQLNCLLL 319

GO:0001825 "blastocyst formation" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=ISO

GO:0016070 "RNA metabolic process" evidence=IMP

RGD|1582881 Wdr74 "WD repeat domain 74" [Rattus norvegicus (taxid:10116)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 102/316 (32%), Positives = 169/316 (53%)

Query:     8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
             ++++G+ TG  KGVNL +   +  N         + +V AL WG   E+++L+  + + +
Sbjct:    10 HVWVGTETGILKGVNLQRK--LAANFTPSGQPRREEAVNALCWGTGGETQILVGCADRTV 67

Query:    68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDE-CILTAVKSGDVKLW---RYKTEPDQWTN 123
             + ++ +   F +      GEG   G+++ D+  ++T V SG +++W     +   D    
Sbjct:    68 RHFNAEEGTFQSQRYCPGGEGTFRGLAQADDGTLITCVDSGILRVWCENDKEASSDPLLE 127

Query:   124 FNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDE 181
               VGP +  M+ +  H++++AT GKEN LK+WDL  ++  +F AKNV +         D 
Sbjct:   128 LKVGPGVCRMRQDPTHTHVVATCGKENALKVWDLQGSEEPVFRAKNVRN---------DW 178

Query:   182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241
              DLR P+W   I FLP S K+  C+    VR+YDP  + QRRPVL+    +  L+ +T T
Sbjct:   179 LDLRVPIWDQDIQFLPGSQKLVTCTGYHQVRIYDPA-SPQRRPVLEATYGEYPLTAMTLT 237

Query:   242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV 301
              + + VIVG+T G +  +D R +G+     KG AG V+ + C  ++ L+ S  LDR  R+
Sbjct:   238 PEGNSVIVGNTHGQLAEIDFR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRI 296

Query:   302 HDFHSKK-LLRKDYMQ 316
             H   + + L  KD  Q
Sbjct:   297 HRIRNPRGLEHKDEPQ 312

GO:0001825 "blastocyst formation" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0016070 "RNA metabolic process" evidence=IEA;ISO

FB|FBgn0033059 CG7845 [Drosophila melanogaster (taxid:7227)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 98/326 (30%), Positives = 176/326 (53%)

Query:     7 YNIYIGSSTGAFKGVNLSKDKCII--KNIQNVKYITNKASVLALNWGNVEESELLIAYSG 64
             + +Y+G+ TG+FK +  + +K      N+ ++  +   + V +L +GN +++E+L+  + 
Sbjct:    17 HELYVGTHTGSFKHLVPASEKTPYGQSNLSDLCALDKDSRVTSLAFGNDDQTEILLGRAK 76

Query:    65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-QWTN 123
               ++I+    K  + NT VSF    IVG++RY++ ++  + +G+++    +   + +   
Sbjct:    77 DAVEIHSFTEKGHSRNT-VSFNAAPIVGLARYNDKLIAGIGNGEIQSLELEANDESEPVV 135

Query:   124 FNVGPQLECMKHNKH-SNIIATGGKE--NDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKP 179
                G Q++ ++      +I+ATGGKE  N+LK++DLN   K IF++KN+ +         
Sbjct:   136 IATGDQMDHLRQCAQVKSIVATGGKERQNNLKVYDLNADGKQIFTSKNLPN--------- 186

Query:   180 DEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT 239
             D   L  PVW + I F+     +A CS+ GYVR+YD +   QRRPV      +  +S  T
Sbjct:   187 DYLQLEVPVWDSDIGFVDGPSVLATCSRTGYVRIYDTR--KQRRPVACFASEEHGMSFTT 244

Query:   240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHF 299
                + +++  G+T G + A D R      + YKGF G + D+        + S SLDR+ 
Sbjct:   245 LVAKGNFIYTGTTMGALKAFDTRRMKTHVHTYKGFTGGISDLHLDATGRFLSSASLDRYV 304

Query:   300 RVHDFHSKKLLRKDYMQSRLTSILVR 325
             R+HD  +  LL + Y++S+ T IL+R
Sbjct:   305 RIHDSETTVLLYQCYVKSKATKILIR 330

GO:0046716 "muscle cell homeostasis" evidence=IGI;IMP

UNIPROTKB|E9PS41 WDR74 "WD repeat-containing protein 74" [Homo sapiens (taxid:9606)]

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 96/273 (35%), Positives = 149/273 (54%)

Query:    58 LLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK-- 115
             +L+  + + +K + T+   F        GEG   G+++ D  ++T V SG +++W  K  
Sbjct:     1 MLVGCADRTVKHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDK 60

Query:   116 -TEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRV 172
              T  D      VGP +  M+ +  H +++ATGGKEN LK+WDL  ++  +F AKNV +  
Sbjct:    61 DTSSDPLLELRVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRN-- 118

Query:   173 LVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232
                    D  DLR P+W   I FLP S K+  C+    VRVYDP  + QRRPVL+    +
Sbjct:   119 -------DWLDLRVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPA-SPQRRPVLETTYGE 170

Query:   233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS 292
               L+ +T T   + VIVG+T G +  +DLR +G+     KG AG V+ + C  ++ L+ S
Sbjct:   171 YPLTAMTLTPGGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLAS 229

Query:   293 VSLDRHFRVHDFHSKK-LLRKDYMQSRLTSILV 324
               LDR  R+H   + + L  K Y++S+L  +L+
Sbjct:   230 CGLDRVLRIHRIQNPRGLEHKVYLKSQLNCLLL 262

GO:0001825 "blastocyst formation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016070 "RNA metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RFH5	WDR74_HUMAN	No assigned EC number	0.3343	0.7184	0.8285	yes	N/A
Q58D06	WDR74_BOVIN	No assigned EC number	0.3314	0.7477	0.8623	yes	N/A
Q8VCG3	WDR74_MOUSE	No assigned EC number	0.3116	0.7477	0.8645	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	444
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-12
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-06
COG4547	620	COG4547, CobT, Cobalamin biosynthesis protein CobT	4e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-05
pfam04147	809	pfam04147, Nop14, Nop14-like family	2e-05
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	4e-05
pfam04147	809	pfam04147, Nop14, Nop14-like family	4e-05
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-04
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-04
COG5271	4600	COG5271, MDN1, AAA ATPase containing von Willebran	1e-04
PTZ00415	2849	PTZ00415, PTZ00415, transmission-blocking target a	3e-04
pfam02724	583	pfam02724, CDC45, CDC45-like protein	3e-04
pfam03344	715	pfam03344, Daxx, Daxx Family	4e-04
PHA00435	306	PHA00435, PHA00435, capsid assembly protein	5e-04
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	6e-04
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	7e-04
TIGR01651	600	TIGR01651, CobT, cobaltochelatase, CobT subunit	7e-04
pfam04147	809	pfam04147, Nop14, Nop14-like family	8e-04
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	0.001
pfam03344	715	pfam03344, Daxx, Daxx Family	0.001
TIGR01651	600	TIGR01651, CobT, cobaltochelatase, CobT subunit	0.001
pfam05793	528	pfam05793, TFIIF_alpha, Transcription initiation f	0.001
COG5137	279	COG5137, COG5137, Histone chaperone involved in ge	0.001
pfam08553	794	pfam08553, VID27, VID27 cytoplasmic protein	0.001
PRK14891	131	PRK14891, PRK14891, 50S ribosomal protein L24e/unk	0.001
COG5271	4600	COG5271, MDN1, AAA ATPase containing von Willebran	0.002
pfam06213	282	pfam06213, CobT, Cobalamin biosynthesis protein Co	0.002
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	0.003
PHA02664	534	PHA02664, PHA02664, hypothetical protein; Provisio	0.003
PTZ00007	337	PTZ00007, PTZ00007, (NAP-L) nucleosome assembly pr	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 49/277 (17%), Positives = 105/277 (37%), Gaps = 35/277 (12%)

Query: 42  KASVLALNWGNVEESELLIAYSGQK-IKIYDTDFKNFNTNTDVSFGEGDIVGV-----SR 95
              V  + +    + +LL   SG   IK++D +     T   +   +G    V     S 
Sbjct: 9   TGGVTCVAF--SPDGKLLATGSGDGTIKVWDLE-----TGELLRTLKGHTGPVRDVAASA 61

Query: 96  YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWD 155
               + +      ++LW  +T     T       +  +  +    I+++  ++  +K+WD
Sbjct: 62  DGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWD 121

Query: 156 LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD 215
           + T K + + +  +                   WVN ++F P+   VA  S+ G ++++D
Sbjct: 122 VETGKCLTTLRGHTD------------------WVNSVAFSPDGTFVASSSQDGTIKLWD 163

Query: 216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA 275
            +     + V  +      ++ +  +     ++  S+ G +   DL   GK     +G  
Sbjct: 164 LR---TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS-TGKCLGTLRGHE 219

Query: 276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK 312
             V  +A   +  L+ S S D   RV D  + + ++ 
Sbjct: 220 NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQT 256

Length = 289

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 51.1 bits (122), Expect = 1e-06
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDE 390
           E+E + +  E  E KGD   +   EH    +   ++  E ++     D + + +    + 
Sbjct: 778 EDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQEL 837

Query: 391 I--DNDEDKQDESEEDGEEEG-----EEEASENEYYTETDEDEKENEEDDGESD 437
              +  E KQDE   DG         EEE  E E   E +E+E+E EE++ E++
Sbjct: 838 NAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENE 891

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|226920 COG4547, CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) [Coenzyme metabolism]

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 337 EEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDED 396
           E++   +  G + E  D + F   +V R+        + T D   E D    DE D D+D
Sbjct: 185 EDKAGEDLDGLAAEIDDQQAF--ARVVRDMLGSMDMAEETGDDGIEED---ADEEDGDDD 239

Query: 397 --KQDESEEDGEEEGE-EEASENEYYTETDEDEKENEEDDGESD 437
               +E  E G EE E  + SE +    TD + +E E D  E+ 
Sbjct: 240 QPDNNEDSEAGREESEGSDESEEDEAEATDGEGEEGEMDAAEAS 283

Length = 620

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 39/255 (15%), Positives = 82/255 (32%), Gaps = 30/255 (11%)

Query: 37  KYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRY 96
               +   V +L +       +    S   I+++D        +T     +  +   S  
Sbjct: 193 TLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPD 252

Query: 97  DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ-LECMKHNKHSNIIATGGKENDLKLWD 155
              + +    G ++LW  ++        +     +  +  +    ++A+G  +  ++LWD
Sbjct: 253 GSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWD 312

Query: 156 LNTTKNIFSAKNVSHRVLVYSVK--------------------------PDEFDLRRPVW 189
           L T K + S     H   V S+                                L     
Sbjct: 313 LETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN 372

Query: 190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV 249
           V  +SF P+   V+  S  G VR++D    +  R    +D     ++ +  +     +  
Sbjct: 373 VLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLR---NLDGHTSRVTSLDFSPDGKSLAS 429

Query: 250 GSTTGDMMAVDLRGK 264
           GS+   +   DL+  
Sbjct: 430 GSSDNTIRLWDLKTS 444

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 16/184 (8%)

Query: 132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191
            +  +    ++ +G  +  +KLWDL+  + +  +    H   V  +              
Sbjct: 70  SIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLA------------- 116

Query: 192 GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS 251
                P+ + + + S      V    ++T  + +  ++    +++ +  +     +  GS
Sbjct: 117 --LSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS 174

Query: 252 TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA-CPLNENLILSVSLDRHFRVHDFHSKKLL 310
           +    + +     GKP     G    V  +A  P    LI S S D   R+ D  + KLL
Sbjct: 175 SLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL 234

Query: 311 RKDY 314
           R   
Sbjct: 235 RSTL 238

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 58/283 (20%), Positives = 101/283 (35%), Gaps = 38/283 (13%)

Query: 70  YDTDFKNFNTNTDVSFGEGDIV---GVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV 126
            D+     + ++ +  G  D +     S   E +L+    G +KLW          +   
Sbjct: 47  SDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEG 106

Query: 127 GP-----QLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPD 180
                  +L     + +S ++A+   +  +KLWDL+T  K I + +  S  V   +  PD
Sbjct: 107 LHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPD 166

Query: 181 E---------------FDLRRPV----------WVNGISFLPNSDK-VAVCSKQGYVRVY 214
                           +DLR              V+ ++F P+    +A  S  G +R++
Sbjct: 167 GKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLW 226

Query: 215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF 274
           D       R  L      V  S    +     +  GS+ G +   DLR          G 
Sbjct: 227 DLSTGKLLRSTLSGHSDSVVSSF---SPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGH 283

Query: 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS 317
           +  V  +A   +  L+ S S D   R+ D  + KLL    ++ 
Sbjct: 284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKG 326

Length = 466

>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 12/105 (11%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDE 390
           E E  +EE++  E   D D++++P+         +N+   +  ++  + +D  D E  DE
Sbjct: 285 EEEDDEEEEDSKESADDLDDEFEPD-------DDDNFGLGQGEEDEEEEEDGVDDE--DE 335

Query: 391 IDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGE 435
            D+D+D ++E E+    + EE+  + +     DED++E EE++ E
Sbjct: 336 EDDDDDLEEEEEDVDLSDEEEDEEDED---SDDEDDEEEEEEEKE 377

Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production. Length = 809

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDE 390
           E+E + E  E  E +G S+ + D    +     +E  AE++         DE  ++    
Sbjct: 802 EHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAK----QDEKGVDGGGG 857

Query: 391 IDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEE 431
            D  + +++E EE+ EEE EEE  E E      E+E+ENEE
Sbjct: 858 SDGGDSEEEEEEEEEEEEEEEEEEEEE------EEEEENEE 892

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family

 Score = 45.8 bits (109), Expect = 4e-05
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDE 390
           E E  KEE E  ++      +       M     ++  E  + ++  D DDE + +  D 
Sbjct: 260 EEELAKEEAERLKKLEAERLR------RMRGEEEDDEEEEDSKESADDLDDEFEPDDDDN 313

Query: 391 IDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGG 439
               + ++DE EE+   + E+E  +++   E +ED   ++E++ E D  
Sbjct: 314 FGLGQGEEDEEEEEDGVDDEDEEDDDDDLEEEEEDVDLSDEEEDEEDED 362

Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production. Length = 809

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDI----- 385
           E E + E +   E +GD  E       E      E+  E +  ++     DE        
Sbjct: 744 EGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEH 803

Query: 386 -EIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENE---EDDGESDGG 439
               +  + DE +     +  + E ++E  E E   E   + K++E   +  G SDGG
Sbjct: 804 EGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGG 861

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDES-DIEIVD 389
           E+  + E++  +E KG+++ + +       +   E   E+K   +  + + E  + E   
Sbjct: 662 ESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGET 721

Query: 390 EIDNDEDKQD-ESEEDGEEEGEEEASE----NEYYTETDEDEKENE-EDDGESDGGRRRG 443
           E +  ED+ + E+ E+GEE  +E   E    +E  TE D  E E+E E + E       G
Sbjct: 722 EAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG 781

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 10/115 (8%)

Query: 331  ENETKK--EEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIV 388
            ENE     E+ +  E++GD  +  D E  +M +   EN  E+   +      DE  +E  
Sbjct: 3983 ENEDLDLPEDLKLDEKEGDVSKDSDLEDMDM-EAADENKEEAD-AEKDEPMQDEDPLEEN 4040

Query: 389  DEIDNDEDKQD-----ESEEDGEEEG-EEEASENEYYTETDEDEKENEEDDGESD 437
            + +D D  + D     E +E   E+G EE   ENE  TE      E  E     +
Sbjct: 4041 NTLDEDIQQDDFSDLAEDDEKMNEDGFEENVQENEESTEDGVKSDEELEQGEVPE 4095

Length = 4600

>gnl|CDD|185603 PTZ00415, PTZ00415, transmission-blocking target antigen s230; Provisional

 Score = 43.5 bits (102), Expect = 3e-04
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 381 DESDIEIVDE--IDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDD 433
            E D+   D   ID+D++ +DE ++D E++ EEE  E E     DEDE++   +D
Sbjct: 141 AEEDMSPRDNFVIDDDDEDEDEDDDDEEDDEEEEEEEEEIKGFDDEDEEDEGGED 195

Length = 2849

>gnl|CDD|217203 pfam02724, CDC45, CDC45-like protein

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 379 YDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDG 438
           +DD    E + +    +D   + EED +++ E +  + E  +   ED++++++DD + D 
Sbjct: 101 FDDGDIEEELQDEPRYDDAYRDLEEDDDDDEESDEEDEE--SSKSEDDEDDDDDDDDDDI 158

Query: 439 GRRRGS 444
             R  S
Sbjct: 159 ATRERS 164

CDC45 is an essential gene required for initiation of DNA replication in S. cerevisiae, forming a complex with MCM5/CDC46. Homologues of CDC45 have been identified in human, mouse and smut fungus among others. Length = 583

>gnl|CDD|217503 pfam03344, Daxx, Daxx Family

 Score = 42.6 bits (100), Expect = 4e-04
 Identities = 18/71 (25%), Positives = 38/71 (53%)

Query: 369 ESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKE 428
            S  + + +  + E +  + +E + +E++++E +E  EEEGE+E  E E   +   +E+ 
Sbjct: 427 TSGESPSMASQESEEEESVEEEEEEEEEEEEEEQESEEEEGEDEEEEEEVEADNGSEEEM 486

Query: 429 NEEDDGESDGG 439
               +G+ DG 
Sbjct: 487 EGSSEGDGDGE 497

The Daxx protein (also known as the Fas-binding protein) is thought to play a role in apoptosis, but precise role played by Daxx remains to be determined. Daxx forms a complex with Axin. Length = 715

>gnl|CDD|222792 PHA00435, PHA00435, capsid assembly protein

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 9/126 (7%)

Query: 314 YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTN 373
           Y    + S +V      E+E      + +   GD     D       + + + Y     N
Sbjct: 9   YASFGVNSAVVTGSTPTEHEQNMLALDVAARDGD-----DAIELAEPETSDDPYG----N 59

Query: 374 KNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDD 433
            +    DDE  IE+    D +E++ +E EED EEEGEEE+ E E   +T E+  E  E  
Sbjct: 60  PDPFGEDDEGRIEVRISEDGEEEEVEEGEEDEEEEGEEESEEFEPLGDTPEELTEASEQL 119

Query: 434 GESDGG 439
            E + G
Sbjct: 120 EEHEEG 125

Length = 306

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 41.9 bits (98), Expect = 6e-04
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 331 ENETKKE-EQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVD 389
           E E   E E E+ EE G      + E     +   EN +E +        + E + EI  
Sbjct: 648 EGERPTEAEGENGEESGG-----EAEQEGETETKGENESEGEIPAERKG-EQEGEGEIEA 701

Query: 390 EIDNDEDKQDESEEDGEEEGEEEASENEYYTETDED-EKENEEDDGESDGG 439
           +  + + + +  E + E E E E +E+E   ET E+ E+  +E +GE++G 
Sbjct: 702 KEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGK 752

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 23/75 (30%), Positives = 36/75 (48%)

Query: 361 QVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYT 420
                +  E+K + +    + E   E   E  N EDK+D+ + + E+E  EE +E E   
Sbjct: 42  DQAAADEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEE 101

Query: 421 ETDEDEKENEEDDGE 435
            +DE+EKE EE    
Sbjct: 102 SSDENEKETEEKTES 116

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|130712 TIGR01651, CobT, cobaltochelatase, CobT subunit

 Score = 41.5 bits (97), Expect = 7e-04
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 361 QVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDED--KQDESEEDGEEEGE-EEASENE 417
           +V RE     +  +   D     D E  DE D D+D   ++E EE GE EGE +E S  +
Sbjct: 188 RVVREMLRSMELAEEMGD-----DTESEDEEDGDDDQPTENEQEEQGEGEGEGQEGSAPQ 242

Query: 418 YYTETDEDEKENEEDDGESD 437
               TD + +  EE+  +SD
Sbjct: 243 ESEATDRESESGEEEMVQSD 262

This model describes Pseudomonas denitrificans CobT gene product, which is a cobalt chelatase subunit that functions in cobalamin biosynthesis. Cobalamin (vitamin B12) can be synthesized via several pathways, including an aerobic pathway (found in Pseudomonas denitrificans) and an anaerobic pathway (found in P. shermanii and Salmonella typhimurium). These pathways differ in the point of cobalt insertion during corrin ring formation. There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction. Confusion regarding the functions of enzymes found in the aerobic vs. anaerobic pathways has arisen because nonhomologous genes in these different pathways were given the same gene symbols. Thus, cobT in the aerobic pathway (P. denitrificans) is not a homolog of cobT in the anaerobic pathway (S. typhimurium). It should be noted that E. coli synthesizes cobalamin only when it is supplied with the precursor cobinamide, which is a complex intermediate. Additionally, all E. coli cobalamin synthesis genes (cobU, cobS and cobT) were named after their Salmonella typhimurium homologs which function in the anaerobic cobalamin synthesis pathway. This model describes the aerobic cobalamin pathway Pseudomonas denitrificans CobT gene product, which is a cobalt chelatase subunit, with a MW ~70 kDa. The aerobic pathway cobalt chelatase is a heterotrimeric, ATP-dependent enzyme that catalyzes cobalt insertion during cobalamin biosynthesis. The other two subunits are the P. denitrificans CobS (TIGR01650) and CobN (pfam02514 CobN/Magnesium Chelatase) proteins. To avoid potential confusion with the nonhomologous Salmonella typhimurium/E.coli cobT gene product, the P. denitrificans gene symbol is not used in the name of this model [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 600

>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family

 Score = 41.5 bits (98), Expect = 8e-04
 Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT--RENYAESKTNKNTSDYDD-----ES 383
           ++E +++ +E +++  D  E  D ++F + Q     E   +   +++  D DD     E 
Sbjct: 288 DDEEEEDSKESADDLDDEFEPDDDDNFGLGQGEEDEEEEEDGVDDEDEEDDDDDLEEEEE 347

Query: 384 DIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEK 427
           D+++ DE +++ED+  + E+D EEE EE+  + +   E+   E 
Sbjct: 348 DVDLSDEEEDEEDEDSDDEDDEEEEEEEKEKKKKKSAESTRSEL 391

Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production. Length = 809

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 331 ENETKKEEQEHSEEKGDSDEK--YDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIV 388
               + E +  +E +G  DE      E  E  +   E  AE K    T     E++ E  
Sbjct: 710 TEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGE 769

Query: 389 DEIDNDEDKQD---ESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGG 439
            E +  ED+ +   ++ EDGE +G+E A   E   E + + +  E+D+ E    
Sbjct: 770 TEAEGKEDEDEGEIQAGEDGEMKGDEGA---EGKVEHEGETEAGEKDEHEGQSE 820

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|217503 pfam03344, Daxx, Daxx Family

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 21/114 (18%), Positives = 48/114 (42%)

Query: 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDE 390
           +++T++EE+   +E+                 T        + ++  +   E + E  +E
Sbjct: 395 QDDTEEEERRKRQERERQGTSSRSSDPSKASSTSGESPSMASQESEEEESVEEEEEEEEE 454

Query: 391 IDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGGRRRGS 444
            + +E + +E E + EEE EE  ++N    E +   + + + +   +   RR S
Sbjct: 455 EEEEEQESEEEEGEDEEEEEEVEADNGSEEEMEGSSEGDGDGEEPEEDAERRNS 508

The Daxx protein (also known as the Fas-binding protein) is thought to play a role in apoptosis, but precise role played by Daxx remains to be determined. Daxx forms a complex with Axin. Length = 715

>gnl|CDD|130712 TIGR01651, CobT, cobaltochelatase, CobT subunit

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 18/103 (17%)

Query: 340 EHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQD 399
           E +EE GD  E  D E  + +Q T     E++  +      +  +     E         
Sbjct: 198 ELAEEMGDDTESEDEEDGDDDQPT-----ENEQEEQGEGEGEGQEGSAPQE--------S 244

Query: 400 ESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGGRRR 442
           E+ +   E GEEE  ++       +D  +  +DD E+ G   R
Sbjct: 245 EATDRESESGEEEMVQS-----DQDDLPDESDDDSETPGEGAR 282

This model describes Pseudomonas denitrificans CobT gene product, which is a cobalt chelatase subunit that functions in cobalamin biosynthesis. Cobalamin (vitamin B12) can be synthesized via several pathways, including an aerobic pathway (found in Pseudomonas denitrificans) and an anaerobic pathway (found in P. shermanii and Salmonella typhimurium). These pathways differ in the point of cobalt insertion during corrin ring formation. There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction. Confusion regarding the functions of enzymes found in the aerobic vs. anaerobic pathways has arisen because nonhomologous genes in these different pathways were given the same gene symbols. Thus, cobT in the aerobic pathway (P. denitrificans) is not a homolog of cobT in the anaerobic pathway (S. typhimurium). It should be noted that E. coli synthesizes cobalamin only when it is supplied with the precursor cobinamide, which is a complex intermediate. Additionally, all E. coli cobalamin synthesis genes (cobU, cobS and cobT) were named after their Salmonella typhimurium homologs which function in the anaerobic cobalamin synthesis pathway. This model describes the aerobic cobalamin pathway Pseudomonas denitrificans CobT gene product, which is a cobalt chelatase subunit, with a MW ~70 kDa. The aerobic pathway cobalt chelatase is a heterotrimeric, ATP-dependent enzyme that catalyzes cobalt insertion during cobalamin biosynthesis. The other two subunits are the P. denitrificans CobS (TIGR01650) and CobN (pfam02514 CobN/Magnesium Chelatase) proteins. To avoid potential confusion with the nonhomologous Salmonella typhimurium/E.coli cobT gene product, the P. denitrificans gene symbol is not used in the name of this model [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 600

>gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 8/123 (6%)

Query: 323 LVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYD-D 381
           L   D   ++E   +E +   E  D DE+   +  +     ++   + K  K   D D D
Sbjct: 213 LKIKDLEGDDEDDGDESDKGGE--DGDEEKSKKKKKKLAKNKKKLDDDKKGKRGGDDDAD 270

Query: 382 ESDIEIVDEIDNDEDKQDESEEDGEEEGEEEAS-----ENEYYTETDEDEKENEEDDGES 436
           E D +  D+   +ED   +S   G +  E E         +   E DED +E+EE+  E 
Sbjct: 271 EYDSDDGDDEGREEDYISDSSASGNDPEEREDKLSPEIPAKPEIEQDEDSEESEEEKNEE 330

Query: 437 DGG 439
           +GG
Sbjct: 331 EGG 333

Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) or RNA polymerase II-associating protein 74 (RAP74) is the large subunit of transcription factor IIF (TFIIF), which is essential for accurate initiation and stimulates elongation by RNA polymerase II. Length = 528

>gnl|CDD|227466 COG5137, COG5137, Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics]

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 324 VRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVTRENYAESKTNKNTSDYDDES 383
           VR  + + NE     +    +  +  EK D E  E   +  E    ++ N    + +D  
Sbjct: 107 VRVGYYVNNEYPGITKLEKSDVEEPSEKVDEEDVERE-ILAEKPRVTRFNIVWDNDEDND 165

Query: 384 DIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDED--EKENEEDDGESDG 438
           +        ++E+++   E DG EE E+E   ++ Y E + +  E+E EE +G  DG
Sbjct: 166 EAPPAQPDVDNEEEERLEESDGREEEEDEEVGSDSYGEGNRELNEEEEEEAEGSDDG 222

Length = 279

>gnl|CDD|219900 pfam08553, VID27, VID27 cytoplasmic protein

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 21/78 (26%), Positives = 41/78 (52%)

Query: 361 QVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYT 420
            + ++ + ++K  +     D  S +EI D     +D+++E EE+ EEE E+E    E+  
Sbjct: 355 TLNKQKWTKAKETEQDYILDAFSALEIEDANTERDDEEEEDEEEEEEEDEDEGPSKEHSD 414

Query: 421 ETDEDEKENEEDDGESDG 438
           + + +E + E    +SDG
Sbjct: 415 DEEFEEDDVESKYEDSDG 432

This is a family of fungal and plant proteins and contains many hypothetical proteins. VID27 is a cytoplasmic protein that plays a potential role in vacuolar protein degradation. Length = 794

>gnl|CDD|184885 PRK14891, PRK14891, 50S ribosomal protein L24e/unknown domain fusion protein; Provisional

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 17/75 (22%), Positives = 30/75 (40%)

Query: 363 TRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTET 422
           T    AE       +   + ++     + D D D+  E++   E + EEE  E    T  
Sbjct: 53  TEAGRAEKGPAAAATAAAEAAEEAEAADADEDADEAAEADAADEADEEEETDEAVDETAD 112

Query: 423 DEDEKENEEDDGESD 437
           + D +  E D+ E +
Sbjct: 113 EADAEAEEADEEEDE 127

Length = 131

>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 329  SLENETKKEEQEHSEEKGDSDEKYDPEHFE----MNQVTRENYAESKTNKNTSDYDDESD 384
            +L  +   EE  + E+  +  +  + E  E    MN VT+++      N ++ + + + D
Sbjct: 3830 TLNEDDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDLD 3889

Query: 385  IEIVDEIDNDEDKQDES---EEDGEEEGEEEASENEYYTETDEDEKENEEDD 433
             E+ D  ++  +  +E    E + E+  E E   NE     +E +  ++EDD
Sbjct: 3890 EEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDD 3941

Length = 4600

>gnl|CDD|148051 pfam06213, CobT, Cobalamin biosynthesis protein CobT

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 361 QVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYT 420
           +V R+  +     +   D  + +D E  +E ++D  + ++ ++  EEE     S +E   
Sbjct: 197 RVVRDMLSSMDMAEELGDEPESADSE-DNEDEDDPKEDEDDDQGEEEESGSSDSLSEDSD 255

Query: 421 ETDEDEKENEEDDGESD 437
            + E+ +  E +  E+ 
Sbjct: 256 ASSEEMESGEMEAAEAS 272

This family consists of several bacterial cobalamin biosynthesis (CobT) proteins. CobT is involved in the transformation of precorrin-3 into cobyrinic acid. Length = 282

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 3/167 (1%)

Query: 149 NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ 208
           +   L   ++   I     +S  ++                +  I+F P+ + +   S  
Sbjct: 27  SLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSD 86

Query: 209 GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAV--DLRGKGK 266
           G ++++D     +    L+            ++   + +++ S++ D      DL   GK
Sbjct: 87  GTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK 146

Query: 267 PCYKYKGFAGCVKDIA-CPLNENLILSVSLDRHFRVHDFHSKKLLRK 312
                +G +  V  +A  P  + L    SLD   ++ D  + K L  
Sbjct: 147 LIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLST 193

Length = 466

>gnl|CDD|177447 PHA02664, PHA02664, hypothetical protein; Provisional

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 389 DEIDNDEDKQDESEEDGEEEGEEEASENEY-YTETDEDEKENEEDDG---ESDGG 439
           D  D+DED  DE E   E    E+ S++ Y Y+ T  +++ +  DD    ESD G
Sbjct: 448 DRADSDEDDMDEQESGDERADGEDDSDSSYSYSTTSSEDESDSADDSWGDESDSG 502

Length = 534

>gnl|CDD|240226 PTZ00007, PTZ00007, (NAP-L) nucleosome assembly protein -L; Provisional

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 390 EIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGGRRRGS 444
           E  +++      E+D + +  +  S +   ++++ D   NEEDD          S
Sbjct: 278 EAIDEDSDYSSDEDDDDYDSYD--SSDSASSDSNSDVDTNEEDDRGEKESNGAKS 330

Length = 337

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	444
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0315|consensus	311		100.0
KOG0286|consensus	343		100.0
KOG0295|consensus	406		100.0
KOG0315|consensus	311		100.0
KOG0318|consensus	603		100.0
KOG0279|consensus	315		100.0
KOG0273|consensus	524		100.0
KOG0319|consensus	775		100.0
KOG0285|consensus	460		100.0
KOG0284|consensus	464		100.0
KOG0295|consensus	406		100.0
KOG0263|consensus	707		100.0
KOG0265|consensus	338		100.0
KOG0284|consensus	464		100.0
KOG0273|consensus	524		100.0
KOG0265|consensus	338		100.0
KOG0296|consensus	399		100.0
KOG0319|consensus	775		100.0
KOG0281|consensus	499		100.0
KOG0291|consensus	893		100.0
KOG0645|consensus	312		100.0
KOG0263|consensus	707		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0281|consensus	499		100.0
KOG0276|consensus	794		100.0
KOG0291|consensus	893		100.0
KOG0316|consensus	307		100.0
KOG0282|consensus	503		100.0
KOG0318|consensus	603		100.0
KOG0306|consensus	888		100.0
KOG0266|consensus	456		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0282|consensus	503		100.0
KOG0313|consensus	423		100.0
KOG0285|consensus	460		100.0
KOG0293|consensus	519		100.0
KOG0266|consensus	456		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0645|consensus	312		100.0
KOG0292|consensus	1202		100.0
KOG0296|consensus	399		100.0
KOG0293|consensus	519		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0275|consensus	508		100.0
KOG1407|consensus	313		100.0
KOG0313|consensus	423		100.0
KOG1446|consensus	311		100.0
KOG1407|consensus	313		100.0
KOG0274|consensus	537		100.0
KOG0275|consensus	508		100.0
KOG0277|consensus	311		100.0
KOG0276|consensus	794		100.0
KOG0277|consensus	311		100.0
KOG0278|consensus	334		100.0
KOG0294|consensus	362		100.0
KOG0278|consensus	334		100.0
KOG0316|consensus	307		100.0
KOG0772|consensus	641		100.0
KOG0306|consensus	888		100.0
KOG0305|consensus	484		100.0
KOG0310|consensus	487		100.0
KOG0268|consensus	433		100.0
KOG0283|consensus	712		100.0
KOG0292|consensus	1202		100.0
KOG0274|consensus	537		100.0
KOG0288|consensus	459		100.0
KOG0643|consensus	327		100.0
KOG0643|consensus	327		100.0
KOG0310|consensus	487		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0288|consensus	459		100.0
KOG0308|consensus	735		100.0
KOG1539|consensus	910		100.0
KOG0640|consensus	430		100.0
KOG0289|consensus	506		100.0
KOG0294|consensus	362		100.0
KOG0268|consensus	433		100.0
KOG0299|consensus	479		99.98
KOG0308|consensus	735		99.98
KOG0305|consensus	484		99.98
KOG0289|consensus	506		99.98
KOG1274|consensus	933		99.98
KOG0264|consensus	422		99.97
KOG0647|consensus	347		99.97
KOG0641|consensus	350		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0641|consensus	350		99.97
KOG0300|consensus	481		99.97
KOG1446|consensus	311		99.97
KOG0973|consensus	942		99.97
KOG0772|consensus	641		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG1036|consensus	323		99.97
KOG1408|consensus	1080		99.97
KOG0301|consensus	745		99.97
KOG0640|consensus	430		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0647|consensus	347		99.97
KOG0973|consensus	942		99.97
KOG0639|consensus	705		99.97
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.97
KOG1036|consensus	323		99.97
KOG0646|consensus	476		99.97
KOG0299|consensus	479		99.97
KOG0301|consensus	745		99.96
KOG0639|consensus	705		99.96
KOG0300|consensus	481		99.96
KOG0283|consensus	712		99.96
KOG2055|consensus	514		99.96
KOG1332|consensus	299		99.96
KOG2055|consensus	514		99.96
KOG1408|consensus	1080		99.96
KOG1063|consensus	764		99.96
KOG1332|consensus	299		99.96
KOG1273|consensus	405		99.96
KOG4283|consensus	397		99.96
KOG0264|consensus	422		99.96
KOG1539|consensus	910		99.96
KOG2106|consensus	626		99.96
KOG4283|consensus	397		99.96
KOG0269|consensus	839		99.96
KOG0269|consensus	839		99.96
KOG2096|consensus	420		99.96
KOG2445|consensus	361		99.95
KOG0321|consensus	720		99.95
KOG0646|consensus	476		99.95
KOG1274|consensus	933		99.95
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.95
KOG0270|consensus	463		99.95
KOG2048|consensus	691		99.95
KOG3881|consensus	412		99.95
KOG4378|consensus	673		99.95
KOG0267|consensus	825		99.95
KOG0267|consensus	825		99.95
KOG4328|consensus	498		99.94
KOG2106|consensus	626		99.94
KOG1273|consensus	405		99.94
KOG0321|consensus	720		99.94
KOG1063|consensus	764		99.94
KOG2096|consensus	420		99.94
KOG2919|consensus	406		99.94
KOG0650|consensus	733		99.94
KOG0302|consensus	440		99.94
KOG1445|consensus	1012		99.94
KOG0270|consensus	463		99.93
KOG2048|consensus	691		99.93
KOG0650|consensus	733		99.93
KOG4328|consensus	498		99.93
KOG2445|consensus	361		99.93
KOG0302|consensus	440		99.93
KOG2919|consensus	406		99.92
KOG0307|consensus	1049		99.92
KOG4378|consensus	673		99.91
KOG1009|consensus	434		99.91
KOG1188|consensus	376		99.91
KOG0307|consensus	1049		99.91
KOG1034|consensus	385		99.9
KOG1034|consensus	385		99.9
KOG1007|consensus	370		99.9
KOG1334|consensus	559		99.89
KOG0290|consensus	364		99.89
PRK11028	330	6-phosphogluconolactonase; Provisional	99.89
KOG1538|consensus	1081		99.89
KOG0290|consensus	364		99.88
COG2319	466	FOG: WD40 repeat [General function prediction only	99.88
KOG0642|consensus	577		99.88
KOG4227|consensus	609		99.87
COG2319	466	FOG: WD40 repeat [General function prediction only	99.87
KOG1587|consensus	555		99.87
KOG1538|consensus	1081		99.87
KOG4227|consensus	609		99.86
KOG0322|consensus	323		99.86
KOG1517|consensus	1387		99.86
KOG1009|consensus	434		99.86
KOG0649|consensus	325		99.86
KOG1188|consensus	376		99.85
KOG0303|consensus	472		99.85
KOG2110|consensus	391		99.85
KOG0322|consensus	323		99.84
KOG1517|consensus	1387		99.84
KOG0644|consensus	1113		99.84
KOG1963|consensus	792		99.84
KOG1587|consensus	555		99.84
KOG2110|consensus	391		99.83
KOG1007|consensus	370		99.83
KOG0771|consensus	398		99.83
KOG1240|consensus	1431		99.83
KOG1334|consensus	559		99.83
KOG1963|consensus	792		99.82
KOG0303|consensus	472		99.82
KOG0642|consensus	577		99.82
KOG0649|consensus	325		99.81
PRK11028	330	6-phosphogluconolactonase; Provisional	99.81
KOG1524|consensus	737		99.81
KOG1524|consensus	737		99.81
KOG1832|consensus	1516		99.8
KOG1272|consensus	545		99.79
KOG4497|consensus	447		99.79
PRK01742	429	tolB translocation protein TolB; Provisional	99.79
KOG1523|consensus	361		99.78
KOG2394|consensus	636		99.78
KOG1523|consensus	361		99.78
KOG1240|consensus	1431		99.78
KOG1445|consensus	1012		99.78
KOG2394|consensus	636		99.78
KOG0771|consensus	398		99.78
KOG2111|consensus	346		99.77
PRK01742	429	tolB translocation protein TolB; Provisional	99.77
KOG4497|consensus	447		99.76
KOG1272|consensus	545		99.75
KOG2321|consensus	703		99.75
PRK03629	429	tolB translocation protein TolB; Provisional	99.74
KOG3881|consensus	412		99.73
KOG2111|consensus	346		99.73
KOG2139|consensus	445		99.73
KOG0644|consensus	1113		99.72
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.72
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.71
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.71
KOG2139|consensus	445		99.71
PRK03629	429	tolB translocation protein TolB; Provisional	99.7
KOG1310|consensus	758		99.69
PRK04922	433	tolB translocation protein TolB; Provisional	99.68
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.67
KOG1310|consensus	758		99.66
KOG2321|consensus	703		99.66
PRK05137	435	tolB translocation protein TolB; Provisional	99.66
PRK04922	433	tolB translocation protein TolB; Provisional	99.65
PRK05137	435	tolB translocation protein TolB; Provisional	99.65
PRK02889	427	tolB translocation protein TolB; Provisional	99.65
KOG2315|consensus	566		99.65
PRK02889	427	tolB translocation protein TolB; Provisional	99.64
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.63
KOG0974|consensus	967		99.63
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.61
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.6
KOG1354|consensus	433		99.59
KOG1409|consensus	404		99.58
KOG2315|consensus	566		99.57
KOG1354|consensus	433		99.57
KOG1832|consensus	1516		99.55
PRK01029	428	tolB translocation protein TolB; Provisional	99.55
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.55
KOG0974|consensus	967		99.54
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.54
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.54
PRK00178	430	tolB translocation protein TolB; Provisional	99.54
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.53
KOG4547|consensus	541		99.53
KOG2041|consensus	1189		99.53
KOG0280|consensus	339		99.52
PRK04792	448	tolB translocation protein TolB; Provisional	99.51
KOG4547|consensus	541		99.5
KOG0280|consensus	339		99.49
KOG1064|consensus	2439		99.49
PRK00178	430	tolB translocation protein TolB; Provisional	99.49
PRK01029	428	tolB translocation protein TolB; Provisional	99.46
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.46
KOG1409|consensus	404		99.46
PRK04792	448	tolB translocation protein TolB; Provisional	99.45
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.45
KOG2314|consensus	698		99.43
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.43
KOG1064|consensus	2439		99.39
COG4946	668	Uncharacterized protein related to the periplasmic	99.35
KOG4532|consensus	344		99.34
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.32
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.31
KOG0309|consensus	1081		99.31
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.31
KOG2041|consensus	1189		99.31
KOG4532|consensus	344		99.28
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.27
KOG4190|consensus	1034		99.27
KOG0309|consensus	1081		99.26
KOG3914|consensus	390		99.26
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.24
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.24
KOG4190|consensus	1034		99.24
KOG1912|consensus	1062		99.24
KOG2314|consensus	698		99.24
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.23
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.23
COG4946	668	Uncharacterized protein related to the periplasmic	99.23
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.2
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.19
KOG4714|consensus	319		99.17
KOG0882|consensus	558		99.16
KOG2695|consensus	425		99.14
PRK04043	419	tolB translocation protein TolB; Provisional	99.13
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.12
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.11
KOG0882|consensus	558		99.11
KOG2695|consensus	425		99.11
KOG3914|consensus	390		99.1
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.09
KOG1912|consensus	1062		99.09
KOG4649|consensus	354		99.09
PRK04043	419	tolB translocation protein TolB; Provisional	99.07
KOG1275|consensus	1118		99.06
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.05
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.02
KOG4714|consensus	319		99.0
KOG1275|consensus	1118		98.98
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.98
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.97
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.95
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.93
KOG4649|consensus	354		98.9
KOG2066|consensus	846		98.86
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.86
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.85
KOG2114|consensus	933		98.84
PRK02888	635	nitrous-oxide reductase; Validated	98.83
KOG2066|consensus	846		98.82
KOG2114|consensus	933		98.79
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.78
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.74
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.73
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.68
KOG1645|consensus	463		98.66
KOG1920|consensus	1265		98.65
KOG1645|consensus	463		98.65
KOG3617|consensus	1416		98.65
KOG1920|consensus	1265		98.62
KOG3621|consensus	726		98.6
PRK02888	635	nitrous-oxide reductase; Validated	98.59
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.58
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.56
KOG1008|consensus	783		98.54
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.51
KOG3617|consensus	1416		98.46
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.45
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.4
KOG3621|consensus	726		98.38
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.38
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.31
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.29
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.28
COG3391	381	Uncharacterized conserved protein [Function unknow	98.26
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.23
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.22
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.2
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.19
KOG1008|consensus	783		98.17
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.17
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.17
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.15
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.15
PHA02713	557	hypothetical protein; Provisional	98.14
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.11
KOG2444|consensus	238		98.09
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.08
COG3391	381	Uncharacterized conserved protein [Function unknow	98.08
KOG1897|consensus	1096		98.07
KOG4441|consensus	571		98.07
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.03
KOG4640|consensus	665		98.02
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.0
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.99
PHA02713	557	hypothetical protein; Provisional	97.97
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.95
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.94
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.94
KOG4441|consensus	571		97.88
KOG2395|consensus	644		97.84
KOG4640|consensus	665		97.84
PF14727	418	PHTB1_N: PTHB1 N-terminus	97.76
KOG2444|consensus	238		97.75
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.75
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.72
KOG1897|consensus	1096		97.7
KOG2079|consensus	1206		97.7
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.7
KOG2395|consensus	644		97.68
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.67
KOG2079|consensus	1206		97.62
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.6
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.58
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.52
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.4
PRK13616	591	lipoprotein LpqB; Provisional	97.39
PHA03098	534	kelch-like protein; Provisional	97.39
PHA03098	534	kelch-like protein; Provisional	97.38
PRK13616	591	lipoprotein LpqB; Provisional	97.34
KOG4499|consensus	310		97.22
COG5276	370	Uncharacterized conserved protein [Function unknow	97.17
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.16
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	97.12
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.11
KOG4499|consensus	310		97.09
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.09
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.01
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.01
KOG3630|consensus	1405		96.96
PHA02790	480	Kelch-like protein; Provisional	96.96
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.89
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.88
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.81
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.8
KOG3630|consensus	1405		96.72
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.7
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.65
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.59
PHA02790	480	Kelch-like protein; Provisional	96.58
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.5
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	96.44
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.41
PLN02193	470	nitrile-specifier protein	96.32
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.3
PLN02153	341	epithiospecifier protein	96.25
PF14727	418	PHTB1_N: PTHB1 N-terminus	96.24
COG5167	776	VID27 Protein involved in vacuole import and degra	96.22
COG5276	370	Uncharacterized conserved protein [Function unknow	96.16
COG5167	776	VID27 Protein involved in vacuole import and degra	96.11
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	96.02
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.01
KOG1916|consensus	1283		96.01
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.85
KOG2377|consensus	657		95.73
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.64
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.56
KOG2280|consensus	829		95.53
KOG2247|consensus	615		95.37
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.31
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.14
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.12
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	95.09
KOG1916|consensus	1283		95.08
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	94.96
PRK10115	686	protease 2; Provisional	94.95
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.94
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.94
KOG1898|consensus	1205		94.92
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	94.89
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.88
KOG2377|consensus	657		94.83
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	94.82
PRK13684	334	Ycf48-like protein; Provisional	94.59
KOG2247|consensus	615		94.56
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.5
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.49
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	94.43
KOG2280|consensus	829		94.3
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	94.29
PRK10115	686	protease 2; Provisional	94.24
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	94.19
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	94.15
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.08
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	94.06
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.99
PRK13684	334	Ycf48-like protein; Provisional	93.86
PLN02153	341	epithiospecifier protein	93.83
KOG2063|consensus	877		93.78
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	93.69
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	93.58
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.47
COG1520	370	FOG: WD40-like repeat [Function unknown]	93.32
KOG4460|consensus	741		93.14
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	93.04
KOG1983|consensus	993		92.98
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	92.96
KOG1900|consensus	1311		92.76
KOG4460|consensus	741		92.54
KOG1896|consensus	1366		92.46
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	92.38
PLN02193	470	nitrile-specifier protein	92.34
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	92.33
COG4590	733	ABC-type uncharacterized transport system, permeas	92.27
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	92.04
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	91.31
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	91.06
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	90.9
KOG1900|consensus	1311		90.85
KOG2038|consensus	988		90.84
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	90.82
KOG1898|consensus	1205		90.6
PF02724	622	CDC45: CDC45-like protein; InterPro: IPR003874 CDC	90.5
KOG2063|consensus	877		90.38
COG4590	733	ABC-type uncharacterized transport system, permeas	90.3
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	90.14
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	89.84
PF12768	281	Rax2: Cortical protein marker for cell polarity	89.29
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	89.23
KOG0943|consensus	3015		89.2
PTZ00415	2849	transmission-blocking target antigen s230; Provisi	89.15
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	89.13
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	88.96
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	88.78
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	88.74
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	88.36
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	88.2
PRK05560	805	DNA gyrase subunit A; Validated	88.04
TIGR01063	800	gyrA DNA gyrase, A subunit. This model describes t	87.77

>KOG0271|consensus

Probab=100.00  E-value=1.9e-54  Score=362.36  Aligned_cols=321  Identities=16%  Similarity=0.220  Sum_probs=281.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++..|++|+.|.++++||+.+...    +...+  +|...|.|++|+ |++..||+|+.||.|++||.++++.+.. .+.
T Consensus       126 ~g~~l~tGsGD~TvR~WD~~TeTp----~~t~K--gH~~WVlcvaws-PDgk~iASG~~dg~I~lwdpktg~~~g~-~l~  197 (480)
T KOG0271|consen  126 TGSRLVTGSGDTTVRLWDLDTETP----LFTCK--GHKNWVLCVAWS-PDGKKIASGSKDGSIRLWDPKTGQQIGR-ALR  197 (480)
T ss_pred             CCceEEecCCCceEEeeccCCCCc----ceeec--CCccEEEEEEEC-CCcchhhccccCCeEEEecCCCCCcccc-ccc
Confidence            678999999999999999988874    22333  899999999999 8999999999999999999998887654 335


Q ss_pred             cccccEEEEEe-------CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          85 FGEGDIVGVSR-------YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        85 ~~~~~v~~~s~-------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      +|..+|+++++       ..++|++++.||.|+|||+..++++..+.+|..+|+|++|--+ .+|++|+.|++|++|+..
T Consensus       198 gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~  276 (480)
T KOG0271|consen  198 GHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRAL  276 (480)
T ss_pred             CcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEcc
Confidence            89999998863       4578999999999999999999999989999999999999744 599999999999999999


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-------------------------CCEEEEEeCCceEE
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-------------------------SDKVAVCSKQGYVR  212 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------------------~~~l~~~~~d~~i~  212 (444)
                      .|.+...+++|.+.+..++++.+-.       .+.=+|.|.                         +..|++|+.|.++.
T Consensus       277 dG~~~r~lkGHahwvN~lalsTdy~-------LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlf  349 (480)
T KOG0271|consen  277 DGKLCRELKGHAHWVNHLALSTDYV-------LRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLF  349 (480)
T ss_pred             chhHHHhhcccchheeeeeccchhh-------hhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEE
Confidence            9999999999999555555543210       011112222                         24699999999999


Q ss_pred             EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      +|+..  ...+++..+.+|...|+.+.|||++++||+++.|..|++|+.++ ++.+.+|+||-++|..++|+.|.++|++
T Consensus       350 lW~p~--~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~t-Gk~lasfRGHv~~VYqvawsaDsRLlVS  426 (480)
T KOG0271|consen  350 LWNPF--KSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRT-GKFLASFRGHVAAVYQVAWSADSRLLVS  426 (480)
T ss_pred             Eeccc--ccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCC-cchhhhhhhccceeEEEEeccCccEEEE
Confidence            99987  56678889999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             EECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         293 VSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       293 ~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      |+.|.+++||++++.++...+. |...|.++-|+         |++..+++++.|..+++|.
T Consensus       427 ~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDws---------pDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  427 GSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWS---------PDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             cCCCceEEEEEeeeeeecccCCCCCceEEEEEec---------CCCceeecCCCceEEEeec
Confidence            9999999999999999988887 99999999877         5578999999999999995

>KOG0271|consensus

Probab=100.00  E-value=8.2e-50  Score=334.64  Aligned_cols=290  Identities=14%  Similarity=0.169  Sum_probs=263.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|..+|.|++|+ |++..|++|+.|.++++||+.+.....+.+  +|..+|.++  +|||+.||+|+.+|.|++||.+++
T Consensus       113 GH~e~Vl~~~fs-p~g~~l~tGsGD~TvR~WD~~TeTp~~t~K--gH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg  189 (480)
T KOG0271|consen  113 GHGEAVLSVQFS-PTGSRLVTGSGDTTVRLWDLDTETPLFTCK--GHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTG  189 (480)
T ss_pred             CCCCcEEEEEec-CCCceEEecCCCceEEeeccCCCCcceeec--CCccEEEEEEECCCcchhhccccCCeEEEecCCCC
Confidence            999999999999 799999999999999999999888777664  888888776  799999999999999999999999


Q ss_pred             Cccc-cccccCCCeEEEEEec-----cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         118 PDQW-TNFNVGPQLECMKHNK-----HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       118 ~~~~-~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                      +++. .+.+|...|++++|.|     ..++||+++.||.|+|||+..+.++..+.+|..                  +|+
T Consensus       190 ~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~------------------~VT  251 (480)
T KOG0271|consen  190 QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTA------------------SVT  251 (480)
T ss_pred             CcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCcc------------------ceE
Confidence            8776 6678999999999977     567999999999999999999999999999998                  899


Q ss_pred             EEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc-----------cCCC---------------
Q psy8152         192 GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT-----------NQSH---------------  245 (444)
Q Consensus       192 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~---------------  245 (444)
                      |+.|--+ .+|++|+.|++|++|+..   .++....+++|...|+.++++           |.++               
T Consensus       252 CvrwGG~-gliySgS~DrtIkvw~a~---dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~r  327 (480)
T KOG0271|consen  252 CVRWGGE-GLIYSGSQDRTIKVWRAL---DGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALER  327 (480)
T ss_pred             EEEEcCC-ceEEecCCCceEEEEEcc---chhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHH
Confidence            9999643 689999999999999998   789999999999999999876           2233               


Q ss_pred             ----------EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-
Q psy8152         246 ----------YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-  314 (444)
Q Consensus       246 ----------~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-  314 (444)
                                .|++|+.|.++.+|+.....+++..+.+|..-|+.+.|||++++||+++.|..|++|+-.+|+.+..+. 
T Consensus       328 Y~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG  407 (480)
T KOG0271|consen  328 YEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG  407 (480)
T ss_pred             HHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhh
Confidence                      499999999999999877467999999999999999999999999999999999999999999999987 


Q ss_pred             cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         315 MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       315 ~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      |-..|..++|+.+         .++++|++.|.++++|++...++.+-+
T Consensus       408 Hv~~VYqvawsaD---------sRLlVS~SkDsTLKvw~V~tkKl~~DL  447 (480)
T KOG0271|consen  408 HVAAVYQVAWSAD---------SRLLVSGSKDSTLKVWDVRTKKLKQDL  447 (480)
T ss_pred             ccceeEEEEeccC---------ccEEEEcCCCceEEEEEeeeeeecccC
Confidence            9999999999865         489999999999999999987776544

>KOG0272|consensus

Probab=100.00  E-value=2.6e-49  Score=335.69  Aligned_cols=273  Identities=17%  Similarity=0.222  Sum_probs=251.3

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +.+...|++|+.+|.+++|+..+...    ++.+.  +|...|.++.|+|. ++..||+|+.||++++|++.+...+..+
T Consensus       184 S~ds~~laT~swsG~~kvW~~~~~~~----~~~l~--gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l  257 (459)
T KOG0272|consen  184 SRDSKHLATGSWSGLVKVWSVPQCNL----LQTLR--GHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDL  257 (459)
T ss_pred             ecCCCeEEEeecCCceeEeecCCcce----eEEEe--ccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhh
Confidence            45778999999999999999877643    23333  99999999999965 3679999999999999999988899888


Q ss_pred             eeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          82 DVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        82 ~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      ..|.+...-.+|+|+|++|++++.|.+-++||+.++..+....+|...|.+++|+|+|.++++|+.|..-+|||++++.+
T Consensus       258 ~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~  337 (459)
T KOG0272|consen  258 EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRC  337 (459)
T ss_pred             hcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcE
Confidence            74444444466789999999999999999999999988877888999999999999999999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+.+|..                  .|.+|+|+|+|..||+|+.|++++|||++   ....++++.+|..-|+.|+|+
T Consensus       338 im~L~gH~k------------------~I~~V~fsPNGy~lATgs~Dnt~kVWDLR---~r~~ly~ipAH~nlVS~Vk~~  396 (459)
T KOG0272|consen  338 IMFLAGHIK------------------EILSVAFSPNGYHLATGSSDNTCKVWDLR---MRSELYTIPAHSNLVSQVKYS  396 (459)
T ss_pred             EEEeccccc------------------ceeeEeECCCceEEeecCCCCcEEEeeec---ccccceecccccchhhheEec
Confidence            999999888                  89999999999999999999999999999   888899999999999999999


Q ss_pred             c-CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         242 N-QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       242 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      | .|.+|++++.|++++||..++ ..+++++.||.+.|.++.++|++++|++++.|+++++|.
T Consensus       397 p~~g~fL~TasyD~t~kiWs~~~-~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  397 PQEGYFLVTASYDNTVKIWSTRT-WSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             ccCCeEEEEcccCcceeeecCCC-cccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            9 689999999999999999999 999999999999999999999999999999999999995

>KOG0272|consensus

Probab=100.00  E-value=5.2e-49  Score=333.88  Aligned_cols=280  Identities=14%  Similarity=0.185  Sum_probs=262.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeC--CCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRY--DECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~--~~~l~~~~~dg~i~iw~~~  115 (444)
                      +-..+|..+.|+ .++..|+||+.+|.++||+..+...+.+|.  +|...+.++  +|.  +..+++|+.||++++|++.
T Consensus       173 gd~rPis~~~fS-~ds~~laT~swsG~~kvW~~~~~~~~~~l~--gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~  249 (459)
T KOG0272|consen  173 GDTRPISGCSFS-RDSKHLATGSWSGLVKVWSVPQCNLLQTLR--GHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLS  249 (459)
T ss_pred             cCCCcceeeEee-cCCCeEEEeecCCceeEeecCCcceeEEEe--ccccceeeEEEccCCCccceeeeccCCceeeeccC
Confidence            668899999999 899999999999999999999998888876  777777654  675  5689999999999999999


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +..++..+.+|...|..++|+|+|++|+|++.|.+-++||++++..+....+|..                  .|.+++|
T Consensus       250 ~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~------------------~v~~iaf  311 (459)
T KOG0272|consen  250 QETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSK------------------GVFSIAF  311 (459)
T ss_pred             CCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccccc------------------ccceeEe
Confidence            9888888999999999999999999999999999999999999998888888888                  8999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      +|+|.++++|+.|..-+|||++   +++++..+.+|..+|.+|+|+|+|..||+|+.|++++|||++. ..+++++++|.
T Consensus       312 ~~DGSL~~tGGlD~~~RvWDlR---tgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~-r~~ly~ipAH~  387 (459)
T KOG0272|consen  312 QPDGSLAATGGLDSLGRVWDLR---TGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM-RSELYTIPAHS  387 (459)
T ss_pred             cCCCceeeccCccchhheeecc---cCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc-cccceeccccc
Confidence            9999999999999999999999   9999999999999999999999999999999999999999999 99999999999


Q ss_pred             CceeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         276 GCVKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       276 ~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .-|+.+.|+| .|.+|+|++.|++++||...+..+++.+. |.+.|-++.++++         +..++|++.|+++|+|.
T Consensus       388 nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d---------~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  388 NLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPD---------SQAIATSSFDRTIKLWR  458 (459)
T ss_pred             chhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccC---------CceEEEeccCceeeecc
Confidence            9999999999 67899999999999999999999999876 9999999988754         57899999999999996

>KOG0286|consensus

Probab=100.00  E-value=8e-45  Score=294.55  Aligned_cols=279  Identities=13%  Similarity=0.141  Sum_probs=255.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|.+.|.++.|+ ++.++|++++.||.+.|||..+....+.+.++  ..+|  .+++|.++++|+|+.|+...||++.+.
T Consensus        53 GH~~Ki~~~~ws-~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~--s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~  129 (343)
T KOG0286|consen   53 GHLNKIYAMDWS-TDSRRIVSASQDGKLIVWDSFTTNKVHAIPLP--SSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTR  129 (343)
T ss_pred             ccccceeeeEec-CCcCeEEeeccCCeEEEEEcccccceeEEecC--ceeEEEEEECCCCCeEEecCcCceeEEEecccc
Confidence            999999999999 89999999999999999999988888888765  5566  456899999999999999999999865


Q ss_pred             ------CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         118 ------PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       118 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                            +..+.+.+|.+.+.|+.|.+ ...|++++.|.++.+||+++++.+..+.+|..                  -|.
T Consensus       130 d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~g------------------DV~  190 (343)
T KOG0286|consen  130 DAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTG------------------DVM  190 (343)
T ss_pred             cccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcc------------------cEE
Confidence                  23335778999999999987 56899999999999999999999999999988                  799


Q ss_pred             EEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         192 GISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       192 ~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      ++.++| +++.+++|+-|+..++||+|   ...++++|.+|...|++++|.|+|.-+++|+.|++.++||++. .+.+..
T Consensus       191 slsl~p~~~ntFvSg~cD~~aklWD~R---~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRa-D~~~a~  266 (343)
T KOG0286|consen  191 SLSLSPSDGNTFVSGGCDKSAKLWDVR---SGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRA-DQELAV  266 (343)
T ss_pred             EEecCCCCCCeEEecccccceeeeecc---CcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecC-CcEEee
Confidence            999999 88999999999999999999   8899999999999999999999999999999999999999999 999988


Q ss_pred             ecc--ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCC
Q psy8152         271 YKG--FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGD  347 (444)
Q Consensus       271 ~~~--h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~  347 (444)
                      +..  -..+|++++||..|++|++|..|.++.+||.-.++.+..+. |.++|.++..+         |++..++|++.|.
T Consensus       267 ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s---------~DG~av~TgSWDs  337 (343)
T KOG0286|consen  267 YSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVS---------PDGMAVATGSWDS  337 (343)
T ss_pred             eccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEEC---------CCCcEEEecchhH
Confidence            873  34589999999999999999999999999999999888876 99999999987         4578999999999


Q ss_pred             CccccC
Q psy8152         348 SDEKYD  353 (444)
Q Consensus       348 ~i~~W~  353 (444)
                      ++|||.
T Consensus       338 ~lriW~  343 (343)
T KOG0286|consen  338 TLRIWA  343 (343)
T ss_pred             heeecC
Confidence            999994

>KOG0279|consensus

Probab=100.00  E-value=9.8e-43  Score=280.71  Aligned_cols=286  Identities=15%  Similarity=0.188  Sum_probs=239.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC-----CCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-----FKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-----~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      +|++.|+.++..+.+.+.|++++.|..+.+|++.     .|..++.+..|.|...=..++++|++.++++.|+++++||+
T Consensus        13 gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl   92 (315)
T KOG0279|consen   13 GHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDL   92 (315)
T ss_pred             CCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEe
Confidence            8999999999996567889999999999999975     35566777644444444556899999999999999999999


Q ss_pred             CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      .+++..+.+.+|...|.+++|+++...+++|+.|.+|++|++.. .+..++.....                +.||.|+.
T Consensus        93 ~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~----------------~~WVscvr  155 (315)
T KOG0279|consen   93 ATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSH----------------REWVSCVR  155 (315)
T ss_pred             cCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCC----------------cCcEEEEE
Confidence            99998888999999999999999999999999999999999875 44445544431                24999999


Q ss_pred             EecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         195 FLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       195 ~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      |+|+  ..+|++++.|++|++||++   +.+....+.+|...++.+++||||.++++|+.||.+.+||++. ++.++.+.
T Consensus       156 fsP~~~~p~Ivs~s~DktvKvWnl~---~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~-~k~lysl~  231 (315)
T KOG0279|consen  156 FSPNESNPIIVSASWDKTVKVWNLR---NCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE-GKNLYSLE  231 (315)
T ss_pred             EcCCCCCcEEEEccCCceEEEEccC---CcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccC-CceeEecc
Confidence            9998  5899999999999999999   8888888999999999999999999999999999999999999 99988886


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--C------ceeEEEEcCCCcccccchhhhhccccc
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--S------RLTSILVRSDFSLENETKKEEQEHSEE  344 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--~------~i~~~~~~~~~~~~~~~~~~~~~~s~~  344 (444)
                       |...|.+++|+|+...|+.+ .+..|+||++.++.++..+...  +      .+.|+  +..|+     +++..|.++-
T Consensus       232 -a~~~v~sl~fspnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~cl--slaws-----~dG~tLf~g~  302 (315)
T KOG0279|consen  232 -AFDIVNSLCFSPNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICL--SLAWS-----ADGQTLFAGY  302 (315)
T ss_pred             -CCCeEeeEEecCCceeEeec-cCCceEEEeccchhhhhhccccccccccccCCcEEE--EEEEc-----CCCcEEEeee
Confidence             78899999999987666554 5566999999998887765421  1      22222  22344     5567899999


Q ss_pred             cCCCccccCCC
Q psy8152         345 KGDSDEKYDPE  355 (444)
Q Consensus       345 ~d~~i~~W~~~  355 (444)
                      .|+.|++|.+.
T Consensus       303 td~~irv~qv~  313 (315)
T KOG0279|consen  303 TDNVIRVWQVA  313 (315)
T ss_pred             cCCcEEEEEee
Confidence            99999999764

>KOG0315|consensus

Probab=100.00  E-value=1.3e-41  Score=269.86  Aligned_cols=294  Identities=15%  Similarity=0.221  Sum_probs=248.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +.-+|++++.|.+|++|...++.+ ...+   +  ...+.|..+... |++..||+|+. ..|++||+.++.........
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG~C-~rTi---q--h~dsqVNrLeiT-pdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e   80 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTGIC-SRTI---Q--HPDSQVNRLEIT-PDKKDLAAAGN-QHVRLYDLNSNNPNPVATFE   80 (311)
T ss_pred             CceEEEeccCcceeeeeehhcCeE-EEEE---e--cCccceeeEEEc-CCcchhhhccC-CeeEEEEccCCCCCceeEEe
Confidence            346899999999999999999997 2333   2  345789999999 79999999887 68999999987764444445


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      +|...|.++  ..+|+.+++|+.||+++|||++...+.+ .+.|..+|+++..+|+...|++|..+|.|++||+....+.
T Consensus        81 ~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR-~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~  159 (311)
T KOG0315|consen   81 GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQR-NYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT  159 (311)
T ss_pred             ccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccch-hccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc
Confidence            666666555  5689999999999999999999977764 7888999999999999899999999999999999987666


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC---CCCccceEEEeCCCCCeeEEE
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI---TTQRRPVLKVDIPDVALSCIT  239 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~~~~i~~~~  239 (444)
                      ..+.....                 ..|.++...|+|.+|+.+...|..++|++-.   .....|+.+++.|..-+..+.
T Consensus       160 ~~liPe~~-----------------~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~  222 (311)
T KOG0315|consen  160 HELIPEDD-----------------TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCL  222 (311)
T ss_pred             cccCCCCC-----------------cceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEE
Confidence            55543322                 3699999999999999999999999999872   123467777899999999999


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCC-cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCC
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKG-KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQS  317 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~  317 (444)
                      +||++++|++++.|.+++||+... . +.-..+.+|...+..++||.++.||++|+.|+.+++|++..++.++... |..
T Consensus       223 lSPd~k~lat~ssdktv~iwn~~~-~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K  301 (311)
T KOG0315|consen  223 LSPDVKYLATCSSDKTVKIWNTDD-FFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHK  301 (311)
T ss_pred             ECCCCcEEEeecCCceEEEEecCC-ceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCccc
Confidence            999999999999999999999998 5 6667788999999999999999999999999999999999999877654 655


Q ss_pred             ceeEEEEc
Q psy8152         318 RLTSILVR  325 (444)
Q Consensus       318 ~i~~~~~~  325 (444)
                      ...|++..
T Consensus       302 ~~vc~~ln  309 (311)
T KOG0315|consen  302 AAVCVALN  309 (311)
T ss_pred             ccEEEEee
Confidence            65666543

>KOG0286|consensus

Probab=100.00  E-value=2.6e-41  Score=274.17  Aligned_cols=271  Identities=15%  Similarity=0.191  Sum_probs=239.8

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--c--ccc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--N--FNT   79 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~--~~~   79 (444)
                      .+..+|++++.||.+.|||..+... .   +.+.  -....|..++|+ |.++++|+|+.|+...||++.+.  +  ...
T Consensus        65 ~Dsr~ivSaSqDGklIvWDs~TtnK-~---haip--l~s~WVMtCA~s-PSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v  137 (343)
T KOG0286|consen   65 TDSRRIVSASQDGKLIVWDSFTTNK-V---HAIP--LPSSWVMTCAYS-PSGNFVACGGLDNKCSIYPLSTRDAEGNVRV  137 (343)
T ss_pred             CCcCeEEeeccCCeEEEEEcccccc-e---eEEe--cCceeEEEEEEC-CCCCeEEecCcCceeEEEeccccccccccee
Confidence            4678999999999999999876653 1   2222  237899999999 79999999999999999999854  2  222


Q ss_pred             ceeeccccccEEEEE-eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcC
Q psy8152          80 NTDVSFGEGDIVGVS-RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        80 ~~~~~~~~~~v~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~  157 (444)
                      ...+.+|.+-+.+.. .+...|++++.|.+..+||+++++.+..+.+|.+.|.++.++| +++.+++|+.|+..++||++
T Consensus       138 ~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R  217 (343)
T KOG0286|consen  138 SRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVR  217 (343)
T ss_pred             eeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeecc
Confidence            323568888887774 4688999999999999999999999998999999999999999 99999999999999999999


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCe
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVAL  235 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i  235 (444)
                      .+.+++++.+|..                  -|++++|.|+|.-|++|+.|++.|+||+|   ..+.+..+.  ....+|
T Consensus       218 ~~~c~qtF~ghes------------------DINsv~ffP~G~afatGSDD~tcRlyDlR---aD~~~a~ys~~~~~~gi  276 (343)
T KOG0286|consen  218 SGQCVQTFEGHES------------------DINSVRFFPSGDAFATGSDDATCRLYDLR---ADQELAVYSHDSIICGI  276 (343)
T ss_pred             CcceeEeeccccc------------------ccceEEEccCCCeeeecCCCceeEEEeec---CCcEEeeeccCcccCCc
Confidence            9999999999998                  79999999999999999999999999999   555555444  345689


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      ++++||..|++|++|..|.++.+||.-. ++.+..+.+|...|+++..+|+|.-|++|+.|.+++||.
T Consensus       277 tSv~FS~SGRlLfagy~d~~c~vWDtlk-~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  277 TSVAFSKSGRLLFAGYDDFTCNVWDTLK-GERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             eeEEEcccccEEEeeecCCceeEeeccc-cceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            9999999999999999999999999999 999999999999999999999999999999999999994

>KOG0295|consensus

Probab=100.00  E-value=8e-42  Score=285.03  Aligned_cols=280  Identities=16%  Similarity=0.218  Sum_probs=258.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcCC-
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKT-  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~-  116 (444)
                      +|..+|+.+-|+ |+-..+++++.|++|++||..++++...++  +|...+..++.  .|++|++++.|-.+++||..+ 
T Consensus       106 g~r~~vt~v~~h-p~~~~v~~as~d~tikv~D~~tg~~e~~Lr--GHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~  182 (406)
T KOG0295|consen  106 GHRSSVTRVIFH-PSEALVVSASEDATIKVFDTETGELERSLR--GHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF  182 (406)
T ss_pred             ccccceeeeeec-cCceEEEEecCCceEEEEEccchhhhhhhh--ccccceeEEEEecCccEEEecCCccchhheeHHHH
Confidence            899999999999 788999999999999999999999988775  77887877754  689999999999999999987 


Q ss_pred             CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      .+++....+|...|.+++|-|.|.++++++.|.+|+.|++.++-++.++.+|..                  ||..++.+
T Consensus       183 ~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e------------------wvr~v~v~  244 (406)
T KOG0295|consen  183 FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE------------------WVRMVRVN  244 (406)
T ss_pred             HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchH------------------hEEEEEec
Confidence            566777889999999999999999999999999999999999999999999988                  99999999


Q ss_pred             cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC---------------CCEEEEEcCCCcEEEEEc
Q psy8152         197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ---------------SHYVIVGSTTGDMMAVDL  261 (444)
Q Consensus       197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------~~~l~~~~~dg~i~iwd~  261 (444)
                      .||.++|+++.|.+|++|-+.   .+.+...++.|+.+|.+++|.|.               +.++++++.|++|++||+
T Consensus       245 ~DGti~As~s~dqtl~vW~~~---t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv  321 (406)
T KOG0295|consen  245 QDGTIIASCSNDQTLRVWVVA---TKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDV  321 (406)
T ss_pred             CCeeEEEecCCCceEEEEEec---cchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEec
Confidence            999999999999999999999   77777788899999999999762               258999999999999999


Q ss_pred             CCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhc
Q psy8152         262 RGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       262 ~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                      .+ +.++.++.+|...|..++|+|.|+||+++..|+++++||++++++...+. |..-++++.|...+         .++
T Consensus       322 ~t-g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~---------p~V  391 (406)
T KOG0295|consen  322 ST-GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTA---------PYV  391 (406)
T ss_pred             cC-CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCC---------ceE
Confidence            99 99999999999999999999999999999999999999999999999887 77778888887553         489


Q ss_pred             cccccCCCccccC
Q psy8152         341 HSEEKGDSDEKYD  353 (444)
Q Consensus       341 ~s~~~d~~i~~W~  353 (444)
                      +||+-|.++++|.
T Consensus       392 vTGsVdqt~KvwE  404 (406)
T KOG0295|consen  392 VTGSVDQTVKVWE  404 (406)
T ss_pred             Eeccccceeeeee
Confidence            9999999999995

>KOG0315|consensus

Probab=100.00  E-value=5.9e-41  Score=266.10  Aligned_cols=275  Identities=13%  Similarity=0.140  Sum_probs=231.3

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc--cccccccCCCeEE
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD--QWTNFNVGPQLEC  132 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~v~~  132 (444)
                      .-+|++++.|.+|++|...+|.+..+++.......-+.+.|++++|++++.- .|++||+.++..  +..+.+|...|++
T Consensus        10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVta   88 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTA   88 (311)
T ss_pred             ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEE
Confidence            4688999999999999999999999997553344445567999999988665 899999998765  5567789999999


Q ss_pred             EEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEE
Q psy8152         133 MKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVR  212 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  212 (444)
                      +.|..+|+++++|+.||+++|||++...+...++.. .                  +|+++..+|+...|++|..+|.|+
T Consensus        89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~-s------------------pVn~vvlhpnQteLis~dqsg~ir  149 (311)
T KOG0315|consen   89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN-S------------------PVNTVVLHPNQTELISGDQSGNIR  149 (311)
T ss_pred             EEEeecCeEEEecCCCceEEEEeccCcccchhccCC-C------------------CcceEEecCCcceEEeecCCCcEE
Confidence            999999999999999999999999986555544333 3                  699999999999999999999999


Q ss_pred             EEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC-----CCcceeEeccccCceeEEEecCC
Q psy8152         213 VYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG-----KGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      +||+.   ...+...+. ....+|.++...|+|.+|+++...|+.++|++-.     +..++.+|+.|.+.|..+.+||+
T Consensus       150 vWDl~---~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd  226 (311)
T KOG0315|consen  150 VWDLG---ENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPD  226 (311)
T ss_pred             EEEcc---CCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCC
Confidence            99999   444444433 3456899999999999999999999999999865     24677888999999999999999


Q ss_pred             CCEEEEEECCCcEEEEEcCCC-ceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         287 ENLILSVSLDRHFRVHDFHSK-KLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       287 ~~~l~s~~~dg~i~vw~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      +++||++|.|.+++||++.+. ++...+. |...++..+|+.+         +.++++++.|+..|+|++..++...
T Consensus       227 ~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~d---------g~YlvTassd~~~rlW~~~~~k~v~  294 (311)
T KOG0315|consen  227 VKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSAD---------GEYLVTASSDHTARLWDLSAGKEVR  294 (311)
T ss_pred             CcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccC---------ccEEEecCCCCceeecccccCceee
Confidence            999999999999999999987 4433443 6677888888744         6899999999999999999776444

>KOG0318|consensus

Probab=100.00  E-value=1.3e-39  Score=284.16  Aligned_cols=336  Identities=14%  Similarity=0.171  Sum_probs=267.7

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeec-ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK-YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      ++++.++++.+.||.|.+||=.++.. .   ..+. ..+|++.|++++|+ |++..|++++.|.+++|||+.+.+++.++
T Consensus       199 sPDG~~Fat~gsDgki~iyDGktge~-v---g~l~~~~aHkGsIfalsWs-PDs~~~~T~SaDkt~KIWdVs~~slv~t~  273 (603)
T KOG0318|consen  199 SPDGSRFATAGSDGKIYIYDGKTGEK-V---GELEDSDAHKGSIFALSWS-PDSTQFLTVSADKTIKIWDVSTNSLVSTW  273 (603)
T ss_pred             CCCCCeEEEecCCccEEEEcCCCccE-E---EEecCCCCccccEEEEEEC-CCCceEEEecCCceEEEEEeeccceEEEe
Confidence            35689999999999999999888875 2   2333 23899999999999 89999999999999999999999999988


Q ss_pred             eeccc-cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          82 DVSFG-EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        82 ~~~~~-~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      .+... ...-..+-+.+..|++.+.+|+|.+++...+.....+.+|...|+++..+|++++|++|+.||.|.-|++.++.
T Consensus       274 ~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~  353 (603)
T KOG0318|consen  274 PMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGT  353 (603)
T ss_pred             ecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcc
Confidence            65332 12233444568899999999999999999999888899999999999999999999999999999999998754


Q ss_pred             eeeee-ecccceeeEeeeC------------------------------------------CCc----------------
Q psy8152         161 NIFSA-KNVSHRVLVYSVK------------------------------------------PDE----------------  181 (444)
Q Consensus       161 ~~~~~-~~~~~~~~~~~~~------------------------------------------~~~----------------  181 (444)
                      .-... +.|...+..+..+                                          +++                
T Consensus       354 ~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~  433 (603)
T KOG0318|consen  354 SDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQD  433 (603)
T ss_pred             ccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEec
Confidence            22111 1111111111111                                          110                


Q ss_pred             ----ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         182 ----FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       182 ----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                          ..........+++++|+++.+++|+.|+.|+||.+. ............|..+|++++|||++.|||+|...+.+.
T Consensus       434 ~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~-g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv  512 (603)
T KOG0318|consen  434 QTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLS-GDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVV  512 (603)
T ss_pred             CCcceeeccccccceEEEcCCCCEEEEecccceEEEEEec-CCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEE
Confidence                011122336899999999999999999999999999 333455555678999999999999999999999999999


Q ss_pred             EEEcCCCCccee-EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccc
Q psy8152         258 AVDLRGKGKPCY-KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENET  334 (444)
Q Consensus       258 iwd~~~~~~~~~-~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~  334 (444)
                      +||+.+ ..... .+.-|+..|.+++|+|+..++|+|+.|..|.||++......-.+  .|...|+.++|...       
T Consensus       513 ~yd~~s-~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wlde-------  584 (603)
T KOG0318|consen  513 LYDVAS-REVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDE-------  584 (603)
T ss_pred             EEEccc-CceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEEecC-------
Confidence            999998 65532 23349999999999999999999999999999999874333333  28888999999766       


Q ss_pred             hhhhhccccccCCCccccCCC
Q psy8152         335 KKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       335 ~~~~~~~s~~~d~~i~~W~~~  355 (444)
                         ..++|.+.|-.||+|++.
T Consensus       585 ---~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  585 ---STVVSSGQDANIKVWNVT  602 (603)
T ss_pred             ---ceEEeccCcceeEEeccc
Confidence               569999999999999863

>KOG0279|consensus

Probab=100.00  E-value=2.7e-40  Score=266.65  Aligned_cols=272  Identities=14%  Similarity=0.152  Sum_probs=228.4

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      .+...+++++.|..+.+|++.....  +.-..++.+ +|...|..+..+ +++++.++++.|+++++||+.+++..+.|.
T Consensus        26 ~~~~~l~sasrDk~ii~W~L~~dd~--~~G~~~r~~~GHsH~v~dv~~s-~dg~~alS~swD~~lrlWDl~~g~~t~~f~  102 (315)
T KOG0279|consen   26 KNSDILVSASRDKTIIVWKLTSDDI--KYGVPVRRLTGHSHFVSDVVLS-SDGNFALSASWDGTLRLWDLATGESTRRFV  102 (315)
T ss_pred             CCCceEEEcccceEEEEEEeccCcc--ccCceeeeeeccceEecceEEc-cCCceEEeccccceEEEEEecCCcEEEEEE
Confidence            4568899999999999999976642  111122222 899999999999 899999999999999999999998888886


Q ss_pred             eccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCcccccccc--CCCeEEEEEecc--CCEEEEeeCCCeEEEEEc
Q psy8152          83 VSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV--GPQLECMKHNKH--SNIIATGGKENDLKLWDL  156 (444)
Q Consensus        83 ~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~  156 (444)
                        +|..-|++  |+++++.|++|+.|.+|++|++...... ++..+  ...|.|++|+|+  ..+|++++.|++|++||+
T Consensus       103 --GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~-t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl  179 (315)
T KOG0279|consen  103 --GHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY-TIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNL  179 (315)
T ss_pred             --ecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE-EEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEcc
Confidence              66666655  5789999999999999999998755444 34443  788999999995  789999999999999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                      ++.+....+.+|.+                  .++.++++|||.+.++|+.||.+.+||++   ..+.++.+. +...|.
T Consensus       180 ~~~~l~~~~~gh~~------------------~v~t~~vSpDGslcasGgkdg~~~LwdL~---~~k~lysl~-a~~~v~  237 (315)
T KOG0279|consen  180 RNCQLRTTFIGHSG------------------YVNTVTVSPDGSLCASGGKDGEAMLWDLN---EGKNLYSLE-AFDIVN  237 (315)
T ss_pred             CCcchhhccccccc------------------cEEEEEECCCCCEEecCCCCceEEEEEcc---CCceeEecc-CCCeEe
Confidence            99999999988888                  89999999999999999999999999999   777777664 777899


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc----c-----cCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG----F-----AGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----h-----~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      +++|+|+...|+.+ .+..|+|||+.+ +..+..+..    .     .....+++|+++|..|++|-.|+.|++|.+.
T Consensus       238 sl~fspnrywL~~a-t~~sIkIwdl~~-~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  238 SLCFSPNRYWLCAA-TATSIKIWDLES-KAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             eEEecCCceeEeec-cCCceEEEeccc-hhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            99999987555555 455699999999 888777652    1     1234567999999999999999999999875

>KOG0273|consensus

Probab=100.00  E-value=1.5e-40  Score=286.16  Aligned_cols=314  Identities=16%  Similarity=0.171  Sum_probs=269.0

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceee---ee-ee----cccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKN---IQ-NV----KYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN   76 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~---~~-~~----~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~   76 (444)
                      ....+++|+.+-..++|++.........   ++ .+    +.......|++++|+ .+|..||+|+.+|.++||+.. |.
T Consensus       190 ~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn-~~G~~LatG~~~G~~riw~~~-G~  267 (524)
T KOG0273|consen  190 RDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWN-NDGTLLATGSEDGEARIWNKD-GN  267 (524)
T ss_pred             hhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEec-CCCCeEEEeecCcEEEEEecC-ch
Confidence            4457899999999999999752110000   00 00    111234689999999 899999999999999999975 66


Q ss_pred             cccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152          77 FNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLW  154 (444)
Q Consensus        77 ~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  154 (444)
                      .+.++.  .|.++|.++-+  .|.+|++++.|+++.+||..++...+.+.-|..+-..+.|- +...+++++.|+.|+|+
T Consensus       268 l~~tl~--~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~-~~~~F~ts~td~~i~V~  344 (524)
T KOG0273|consen  268 LISTLG--QHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ-SNDEFATSSTDGCIHVC  344 (524)
T ss_pred             hhhhhh--ccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe-cCceEeecCCCceEEEE
Confidence            666664  78999999865  57899999999999999999999887677788887888997 45679999999999999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA  234 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  234 (444)
                      .+....++.++.+|.+                  .|.+|.|.|.+.+|++++.|++++||...   .......+..|...
T Consensus       345 kv~~~~P~~t~~GH~g------------------~V~alk~n~tg~LLaS~SdD~TlkiWs~~---~~~~~~~l~~Hske  403 (524)
T KOG0273|consen  345 KVGEDRPVKTFIGHHG------------------EVNALKWNPTGSLLASCSDDGTLKIWSMG---QSNSVHDLQAHSKE  403 (524)
T ss_pred             EecCCCcceeeecccC------------------ceEEEEECCCCceEEEecCCCeeEeeecC---CCcchhhhhhhccc
Confidence            9999999999999888                  89999999999999999999999999988   78888889999999


Q ss_pred             eeEEEEccCC---------CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         235 LSCITTTNQS---------HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       235 i~~~~~~~~~---------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      |..+.|+|.|         ..|++++.|++|++||+.. +.++++|..|..+|.+++|+|+|+++|+|+.||.|.+|+++
T Consensus       404 i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~-gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~  482 (524)
T KOG0273|consen  404 IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES-GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK  482 (524)
T ss_pred             eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC-CceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence            9999999964         4789999999999999999 99999999999999999999999999999999999999999


Q ss_pred             CCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         306 SKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      ++++.+...-.+.|..++|+..         +.++...-.|+.+.+-++
T Consensus       483 ~~~l~~s~~~~~~Ifel~Wn~~---------G~kl~~~~sd~~vcvldl  522 (524)
T KOG0273|consen  483 TGKLVKSYQGTGGIFELCWNAA---------GDKLGACASDGSVCVLDL  522 (524)
T ss_pred             chheeEeecCCCeEEEEEEcCC---------CCEEEEEecCCCceEEEe
Confidence            9999998888888999999866         355666667777776654

>KOG0319|consensus

Probab=100.00  E-value=1e-40  Score=301.94  Aligned_cols=342  Identities=13%  Similarity=0.131  Sum_probs=262.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++..|++++..+.+++|.+.+++.    +...+. .|.+||.-|+|+ |.+..|++|+.|+.|+|||+..+.+...|+ 
T Consensus        72 ~d~~~L~~a~rs~llrv~~L~tgk~----irswKa-~He~Pvi~ma~~-~~g~LlAtggaD~~v~VWdi~~~~~th~fk-  144 (775)
T KOG0319|consen   72 PDEEVLVTASRSQLLRVWSLPTGKL----IRSWKA-IHEAPVITMAFD-PTGTLLATGGADGRVKVWDIKNGYCTHSFK-  144 (775)
T ss_pred             CCccEEEEeeccceEEEEEcccchH----hHhHhh-ccCCCeEEEEEc-CCCceEEeccccceEEEEEeeCCEEEEEec-
Confidence            4578999999999999999999975    233332 599999999999 788999999999999999999999999997 


Q ss_pred             ccccccEEEE--EeCC--CeEEEEecCCcEEEEEcCCCC-ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152          84 SFGEGDIVGV--SRYD--ECILTAVKSGDVKLWRYKTEP-DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~--~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~  158 (444)
                       +|.+.|.++  .|+.  ..|++|..|+++++||+.+.. ++.....|.+.|++++|.+++..+++++.|..|.+||+.+
T Consensus       145 -G~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~  223 (775)
T KOG0319|consen  145 -GHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQ  223 (775)
T ss_pred             -CCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhh
Confidence             667777665  4443  458999999999999998554 4767888999999999999999999999999999999965


Q ss_pred             ceeeeeeeccc-------------------------ceeeEeee----------CCCc----------------------
Q psy8152         159 TKNIFSAKNVS-------------------------HRVLVYSV----------KPDE----------------------  181 (444)
Q Consensus       159 ~~~~~~~~~~~-------------------------~~~~~~~~----------~~~~----------------------  181 (444)
                      .+...+++...                         +.+..+..          .|++                      
T Consensus       224 ~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQ  303 (775)
T KOG0319|consen  224 YKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQ  303 (775)
T ss_pred             hhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccc
Confidence            43222221100                         00000000          0000                      


Q ss_pred             --------------------------------------------------------ccccCccc----------------
Q psy8152         182 --------------------------------------------------------FDLRRPVW----------------  189 (444)
Q Consensus       182 --------------------------------------------------------~~~~~~~~----------------  189 (444)
                                                                              .-..|...                
T Consensus       304 nl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~  383 (775)
T KOG0319|consen  304 NLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATG  383 (775)
T ss_pred             eEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEe
Confidence                                                                    00000111                


Q ss_pred             ------------------------------eeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCcc--ceE----EEeCCC
Q psy8152         190 ------------------------------VNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRR--PVL----KVDIPD  232 (444)
Q Consensus       190 ------------------------------i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~--~~~----~~~~~~  232 (444)
                                                    |.+++++..+ .+|++++.|.++++|++..+....  .+.    +...|.
T Consensus       384 sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHd  463 (775)
T KOG0319|consen  384 SKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHD  463 (775)
T ss_pred             cCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhc
Confidence                                          3444443333 444455555555555554100011  111    224688


Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      ..|++++.+|+.++||||+.|.+.+||++.. ...+.++.||+..|.++.|+|..+.|+++|.|++|+||.+.+..++++
T Consensus       464 KdIN~Vaia~ndkLiAT~SqDktaKiW~le~-~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT  542 (775)
T KOG0319|consen  464 KDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-LRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKT  542 (775)
T ss_pred             ccccceEecCCCceEEecccccceeeecccC-ceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeee
Confidence            8999999999999999999999999999998 999999999999999999999999999999999999999999999999


Q ss_pred             ee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         313 DY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       313 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      +. |...|..+.|-.         ++++++|++.||.+++|++++.+....+
T Consensus       543 ~eGH~~aVlra~F~~---------~~~qliS~~adGliKlWnikt~eC~~tl  585 (775)
T KOG0319|consen  543 FEGHTSAVLRASFIR---------NGKQLISAGADGLIKLWNIKTNECEMTL  585 (775)
T ss_pred             ecCccceeEeeeeee---------CCcEEEeccCCCcEEEEeccchhhhhhh
Confidence            98 999998888874         3689999999999999999998877655

>KOG0285|consensus

Probab=100.00  E-value=3.8e-40  Score=274.44  Aligned_cols=280  Identities=13%  Similarity=0.207  Sum_probs=250.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|.+.|.|+++. |.+.+|++|+.|++|+|||+.++++..++.  +|...|..  +|+-..|+++++.|+.|+.||+...
T Consensus       149 gHlgWVr~vavd-P~n~wf~tgs~DrtikIwDlatg~Lkltlt--Ghi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~n  225 (460)
T KOG0285|consen  149 GHLGWVRSVAVD-PGNEWFATGSADRTIKIWDLATGQLKLTLT--GHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYN  225 (460)
T ss_pred             hccceEEEEeeC-CCceeEEecCCCceeEEEEcccCeEEEeec--chhheeeeeeecccCceEEEecCCCeeEEEechhh
Confidence            899999999999 789999999999999999999999988875  66666655  5677889999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +.++.+.+|-..|.|++.+|.-..|++|+.|.+++|||+++...+..+.+|..                  +|.++.+.|
T Consensus       226 kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~------------------~V~~V~~~~  287 (460)
T KOG0285|consen  226 KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTN------------------PVASVMCQP  287 (460)
T ss_pred             hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCC------------------cceeEEeec
Confidence            99999999999999999999999999999999999999999999999999998                  899999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                      -...+++|+.|++|++||++   .++...++..|...+.+++.+|....+|+++.|. |+-|++.. +..++.+.+|+..
T Consensus       288 ~dpqvit~S~D~tvrlWDl~---agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~-g~f~~nlsgh~~i  362 (460)
T KOG0285|consen  288 TDPQVITGSHDSTVRLWDLR---AGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPE-GEFLQNLSGHNAI  362 (460)
T ss_pred             CCCceEEecCCceEEEeeec---cCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCc-cchhhccccccce
Confidence            88899999999999999999   8888899999999999999999998899888775 99999999 9999999999999


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe---ecCC------ceeEEEEcCCCcccccchhhhhccccccCCC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD---YMQS------RLTSILVRSDFSLENETKKEEQEHSEEKGDS  348 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~---~~~~------~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~  348 (444)
                      |++++.+.++ ++++|+..|.|.+||.++|...+..   ...+      .|.+.+|.         ..+..|+++..|.+
T Consensus       363 intl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fD---------ktg~rlit~eadKt  432 (460)
T KOG0285|consen  363 INTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFD---------KTGSRLITGEADKT  432 (460)
T ss_pred             eeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeec---------ccCceEEeccCCcc
Confidence            9999997664 7889999999999999997655443   2233      34455544         44678999999999


Q ss_pred             ccccCCC
Q psy8152         349 DEKYDPE  355 (444)
Q Consensus       349 i~~W~~~  355 (444)
                      |++|.-.
T Consensus       433 Ik~~keD  439 (460)
T KOG0285|consen  433 IKMYKED  439 (460)
T ss_pred             eEEEecc
Confidence            9999755

>KOG0284|consensus

Probab=100.00  E-value=3.8e-41  Score=284.87  Aligned_cols=271  Identities=18%  Similarity=0.267  Sum_probs=238.5

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ..+..|++|+..|.+.+|+...-     ++..+.. .|..+|++|.|+ +++.++++|..+|.|++|+.. ...++.+..
T Consensus       106 PeGRRLltgs~SGEFtLWNg~~f-----nFEtilQ-aHDs~Vr~m~ws-~~g~wmiSgD~gG~iKyWqpn-mnnVk~~~a  177 (464)
T KOG0284|consen  106 PEGRRLLTGSQSGEFTLWNGTSF-----NFETILQ-AHDSPVRTMKWS-HNGTWMISGDKGGMIKYWQPN-MNNVKIIQA  177 (464)
T ss_pred             CCCceeEeecccccEEEecCcee-----eHHHHhh-hhcccceeEEEc-cCCCEEEEcCCCceEEecccc-hhhhHHhhH
Confidence            35689999999999999997432     2333333 899999999999 899999999999999999976 334444432


Q ss_pred             ccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       .|...|  .+|+|+...+++++.||+|+|||....+....+.+|.-.|.+++|+|...+||+|+.|+.|++||.+++.+
T Consensus       178 -hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~c  256 (464)
T KOG0284|consen  178 -HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSC  256 (464)
T ss_pred             -hhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcch
Confidence             233455  55688899999999999999999988877777899999999999999989999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +.++..|++                  .|..+.|+|++++|++++.|..+++||++   ..+.++++++|...++++.|+
T Consensus       257 l~tlh~HKn------------------tVl~~~f~~n~N~Llt~skD~~~kv~DiR---~mkEl~~~r~Hkkdv~~~~Wh  315 (464)
T KOG0284|consen  257 LATLHGHKN------------------TVLAVKFNPNGNWLLTGSKDQSCKVFDIR---TMKELFTYRGHKKDVTSLTWH  315 (464)
T ss_pred             hhhhhhccc------------------eEEEEEEcCCCCeeEEccCCceEEEEehh---HhHHHHHhhcchhhheeeccc
Confidence            999999998                  89999999999999999999999999999   888999999999999999999


Q ss_pred             cC-CCEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         242 NQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       242 ~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      |- ..+|.+|+.||.|..|.+.. .+++..+. +|...|++++|+|-|.+|++|+.|.++++|.-.
T Consensus       316 P~~~~lftsgg~Dgsvvh~~v~~-~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  316 PLNESLFTSGGSDGSVVHWVVGL-EEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             cccccceeeccCCCceEEEeccc-cccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence            95 56788899999999999986 67776666 799999999999999999999999999999754

>KOG0295|consensus

Probab=100.00  E-value=5.1e-40  Score=274.27  Aligned_cols=285  Identities=13%  Similarity=0.134  Sum_probs=246.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Cccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~   83 (444)
                      ....+++++.+++|++||..+++.    ...++  +|..+|..++|+ ..+.+|++++.|-.+++|+..+ .++++....
T Consensus       119 ~~~~v~~as~d~tikv~D~~tg~~----e~~Lr--GHt~sv~di~~~-a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~g  191 (406)
T KOG0295|consen  119 SEALVVSASEDATIKVFDTETGEL----ERSLR--GHTDSVFDISFD-ASGKYLATCSSDLSAKLWDFDTFFRCIKSLIG  191 (406)
T ss_pred             CceEEEEecCCceEEEEEccchhh----hhhhh--ccccceeEEEEe-cCccEEEecCCccchhheeHHHHHHHHHHhcC
Confidence            345678888999999999999985    23333  999999999999 8999999999999999999976 556666654


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      +.|......+-|.|.+|++++.|.+|+.|++.++.++.++.+|...|.-++.+.+|.++|+++.|.+|++|-+.++++..
T Consensus       192 h~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~  271 (406)
T KOG0295|consen  192 HEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKA  271 (406)
T ss_pred             cccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhh
Confidence            55555556667999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      .++.|.+.+..+++.|...-..    |+...-+. .++++++++.|++|++||+.   .+.+++++.+|...|..++|+|
T Consensus       272 ~lR~hEh~vEci~wap~~~~~~----i~~at~~~~~~~~l~s~SrDktIk~wdv~---tg~cL~tL~ghdnwVr~~af~p  344 (406)
T KOG0295|consen  272 ELREHEHPVECIAWAPESSYPS----ISEATGSTNGGQVLGSGSRDKTIKIWDVS---TGMCLFTLVGHDNWVRGVAFSP  344 (406)
T ss_pred             hhhccccceEEEEecccccCcc----hhhccCCCCCccEEEeecccceEEEEecc---CCeEEEEEecccceeeeeEEcC
Confidence            9999999666666655432110    11111111 13699999999999999999   8999999999999999999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .|+||+++..|+++++||+++ .+++.++..|...|+++.|+.+..++++|+-|.++++|..
T Consensus       345 ~Gkyi~ScaDDktlrvwdl~~-~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  345 GGKYILSCADDKTLRVWDLKN-LQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             CCeEEEEEecCCcEEEEEecc-ceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence            999999999999999999999 9999999999999999999999999999999999999974

>KOG0263|consensus

Probab=100.00  E-value=7.1e-41  Score=305.95  Aligned_cols=274  Identities=15%  Similarity=0.185  Sum_probs=241.2

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ...++|..|+ +++..||.|..|..|++|.+...++.. ++  . ..       +-..+=+.+.|-.+.+.|........
T Consensus       378 ~~~v~ca~fS-ddssmlA~Gf~dS~i~~~Sl~p~kl~~-lk--~-~~-------~l~~~d~~sad~~~~~~D~~~~~~~~  445 (707)
T KOG0263|consen  378 YQGVTCAEFS-DDSSMLACGFVDSSVRVWSLTPKKLKK-LK--D-AS-------DLSNIDTESADVDVDMLDDDSSGTSR  445 (707)
T ss_pred             CCcceeEeec-CCcchhhccccccEEEEEecchhhhcc-cc--c-hh-------hhccccccccchhhhhccccCCceeE
Confidence            4678999999 799999999999999999987543322 21  1 11       11122234445456777777666666


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                      .+.+|.++|..+.|+|+.++|++++.|+++|+|.+.+..++..+++|..                  +|..+.|+|.|.+
T Consensus       446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~------------------PVwdV~F~P~GyY  507 (707)
T KOG0263|consen  446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLA------------------PVWDVQFAPRGYY  507 (707)
T ss_pred             EeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCc------------------ceeeEEecCCceE
Confidence            7999999999999999999999999999999999999999999999888                  8999999999999


Q ss_pred             EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE
Q psy8152         202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI  281 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~  281 (444)
                      ||+++.|++.++|...   ...+++.+.+|.+.|.|+.|+|+..|+++|+.|.++|+||+.+ +..++.|.||.++|+++
T Consensus       508 Fatas~D~tArLWs~d---~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~-G~~VRiF~GH~~~V~al  583 (707)
T KOG0263|consen  508 FATASHDQTARLWSTD---HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST-GNSVRIFTGHKGPVTAL  583 (707)
T ss_pred             EEecCCCceeeeeecc---cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCC-CcEEEEecCCCCceEEE
Confidence            9999999999999999   7889999999999999999999999999999999999999999 99999999999999999


Q ss_pred             EecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         282 ACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      +|||+|++|++|+.||.|++||+.+++++..+. |.+.|.++.|+.         ++..+++++.|.+|++||+....
T Consensus       584 ~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~---------dg~vLasgg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  584 AFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSR---------DGNVLASGGADNSVRLWDLTKVI  652 (707)
T ss_pred             EEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEec---------CCCEEEecCCCCeEEEEEchhhc
Confidence            999999999999999999999999999988865 999999999974         46899999999999999988543

>KOG0265|consensus

Probab=100.00  E-value=3.1e-39  Score=263.13  Aligned_cols=280  Identities=15%  Similarity=0.187  Sum_probs=245.7

Q ss_pred             cCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCC
Q psy8152          39 ITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        39 ~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      ++|.+.|+.+.|+ |++.+||+|+.|..|.+|++. +.+.......+|.+.|+.+  .++++.|++++.|.+|+.||+++
T Consensus        44 ~gh~geI~~~~F~-P~gs~~aSgG~Dr~I~LWnv~-gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t  121 (338)
T KOG0265|consen   44 PGHKGEIYTIKFH-PDGSCFASGGSDRAIVLWNVY-GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAET  121 (338)
T ss_pred             CCCcceEEEEEEC-CCCCeEeecCCcceEEEEecc-ccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence            3999999999999 699999999999999999975 5555555556999999988  46899999999999999999999


Q ss_pred             CCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         117 EPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +++++++..|..-|+.+.-+. ...++.+++.|+++++||+++..++.++....                   .++++.|
T Consensus       122 G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky-------------------qltAv~f  182 (338)
T KOG0265|consen  122 GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKY-------------------QLTAVGF  182 (338)
T ss_pred             ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccce-------------------eEEEEEe
Confidence            999999999999999998554 55677889999999999999988887764433                   4999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC--C-CcceeEec
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG--K-GKPCYKYK  272 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~-~~~~~~~~  272 (444)
                      ...+..+++|+-|+.|++||++   ....++.+.+|..+|+.+..+|.|.++.+-+.|.++++||++.  + .+++..+.
T Consensus       183 ~d~s~qv~sggIdn~ikvWd~r---~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~  259 (338)
T KOG0265|consen  183 KDTSDQVISGGIDNDIKVWDLR---KNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQ  259 (338)
T ss_pred             cccccceeeccccCceeeeccc---cCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEee
Confidence            9999999999999999999999   8889999999999999999999999999999999999999986  1 23467777


Q ss_pred             cccC----ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCC
Q psy8152         273 GFAG----CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGD  347 (444)
Q Consensus       273 ~h~~----~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~  347 (444)
                      +|..    ....++|+|++..+.+|+.|+.+++||......++.+. |.+.|+++.|.|.         ...+.+++.|.
T Consensus       260 g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~---------e~iils~~sdk  330 (338)
T KOG0265|consen  260 GHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPT---------EPIILSCSSDK  330 (338)
T ss_pred             cchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCC---------CcEEEEeccCc
Confidence            6532    45677999999999999999999999999989988886 9999999999865         46888999998


Q ss_pred             Cccc
Q psy8152         348 SDEK  351 (444)
Q Consensus       348 ~i~~  351 (444)
                      +|.+
T Consensus       331 ~i~l  334 (338)
T KOG0265|consen  331 TIYL  334 (338)
T ss_pred             eeEe
Confidence            8865

>KOG0284|consensus

Probab=100.00  E-value=7.9e-41  Score=282.97  Aligned_cols=279  Identities=14%  Similarity=0.202  Sum_probs=248.9

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      +.+|..|+|. |+|+.|++|+..|.+.+|+..+-.....+  ..|..+|.++  ++++.++++|..+|.|++|+..-...
T Consensus        96 kc~V~~v~Wt-PeGRRLltgs~SGEFtLWNg~~fnFEtil--QaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV  172 (464)
T KOG0284|consen   96 KCPVNVVRWT-PEGRRLLTGSQSGEFTLWNGTSFNFETIL--QAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV  172 (464)
T ss_pred             ccceeeEEEc-CCCceeEeecccccEEEecCceeeHHHHh--hhhcccceeEEEccCCCEEEEcCCCceEEecccchhhh
Confidence            4589999999 79999999999999999998554444444  4778888776  67899999999999999999875554


Q ss_pred             cccccc-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         120 QWTNFN-VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       120 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      . .+.. |...|++++|+|+...|++++.||+|+|||....+.-..+.+|.-                  -|.++.|+|.
T Consensus       173 k-~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgw------------------dVksvdWHP~  233 (464)
T KOG0284|consen  173 K-IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGW------------------DVKSVDWHPT  233 (464)
T ss_pred             H-HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCC------------------CcceeccCCc
Confidence            4 3444 559999999999889999999999999999999888888888887                  7999999999


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCce
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCV  278 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i  278 (444)
                      ..+|++++.|..|++||.+   ++.++.++..|...|..+.|+|++++|++++.|..++++|+++ .+.+.++++|...|
T Consensus       234 kgLiasgskDnlVKlWDpr---Sg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~-mkEl~~~r~Hkkdv  309 (464)
T KOG0284|consen  234 KGLIASGSKDNLVKLWDPR---SGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT-MKELFTYRGHKKDV  309 (464)
T ss_pred             cceeEEccCCceeEeecCC---CcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhH-hHHHHHhhcchhhh
Confidence            9999999999999999999   9999999999999999999999999999999999999999998 89999999999999


Q ss_pred             eEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEee--cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         279 KDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       279 ~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      +++.|+|-. .+|.+|+.||.|..|.+...+++..+.  |...|++++|.|-         +..+++|+.|.++++|...
T Consensus       310 ~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPl---------Ghil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  310 TSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPL---------GHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             eeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeecccc---------ceeEeecCCCcceeeeccC
Confidence            999999955 689999999999999998767766654  8888999998854         6789999999999999865

>KOG0273|consensus

Probab=100.00  E-value=1e-38  Score=274.97  Aligned_cols=269  Identities=16%  Similarity=0.258  Sum_probs=241.8

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .++..||+|+.+|.+++|+.....     +..+.  .|+++|.++.|+ ..+++|++++.|+++.+||..++...+.|. 
T Consensus       245 ~~G~~LatG~~~G~~riw~~~G~l-----~~tl~--~HkgPI~slKWn-k~G~yilS~~vD~ttilwd~~~g~~~q~f~-  315 (524)
T KOG0273|consen  245 NDGTLLATGSEDGEARIWNKDGNL-----ISTLG--QHKGPIFSLKWN-KKGTYILSGGVDGTTILWDAHTGTVKQQFE-  315 (524)
T ss_pred             CCCCeEEEeecCcEEEEEecCchh-----hhhhh--ccCCceEEEEEc-CCCCEEEeccCCccEEEEeccCceEEEeee-
Confidence            357899999999999999987665     23333  799999999999 799999999999999999999999999887 


Q ss_pred             ccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          84 SFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        84 ~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                       .|..+...+-+ +...+++++.|+.|+|+.+....++.++.+|.++|.++.|+|.+.+|++++.|++++||.+......
T Consensus       316 -~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~  394 (524)
T KOG0273|consen  316 -FHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV  394 (524)
T ss_pred             -eccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch
Confidence             44666566665 4567999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCC---------CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS---------DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      ..+..|..                  .|+.+.|+|.+         ..|++++.|++|++||+.   .+.++++|..|..
T Consensus       395 ~~l~~Hsk------------------ei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~---~gv~i~~f~kH~~  453 (524)
T KOG0273|consen  395 HDLQAHSK------------------EIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVE---SGVPIHTLMKHQE  453 (524)
T ss_pred             hhhhhhcc------------------ceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEcc---CCceeEeeccCCC
Confidence            99999988                  46666666643         578999999999999999   9999999999999


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      +|.+++|+|+|+|+|+|+.||.|.+|+++. ++.++.+.+ .+.|..++|+..|.+|..+-.|+.+++.|++
T Consensus       454 pVysvafS~~g~ylAsGs~dg~V~iws~~~-~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  454 PVYSVAFSPNGRYLASGSLDGCVHIWSTKT-GKLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             ceEEEEecCCCcEEEecCCCCeeEeccccc-hheeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            999999999999999999999999999999 999999986 5669999999999999999999999999875

>KOG0265|consensus

Probab=100.00  E-value=1.6e-38  Score=259.01  Aligned_cols=271  Identities=20%  Similarity=0.245  Sum_probs=239.7

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++..|++|+.|..|.+|++....   +++..++  +|.++|..+.|. ++++.|++++.|.+|+.||+++|+....++ 
T Consensus        57 P~gs~~aSgG~Dr~I~LWnv~gdc---eN~~~lk--gHsgAVM~l~~~-~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k-  129 (338)
T KOG0265|consen   57 PDGSCFASGGSDRAIVLWNVYGDC---ENFWVLK--GHSGAVMELHGM-RDGSHILSCGTDKTVRGWDAETGKRIRKHK-  129 (338)
T ss_pred             CCCCeEeecCCcceEEEEeccccc---cceeeec--cccceeEeeeec-cCCCEEEEecCCceEEEEecccceeeehhc-
Confidence            378999999999999999976543   2344444  899999999999 799999999999999999999999999886 


Q ss_pred             ccccccEEEEEeC---CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          84 SFGEGDIVGVSRY---DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        84 ~~~~~~v~~~s~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                       .|...+.++.|.   ..++.+++.|+++++||+++..+++ .+..+.+++++.|...+..+.+|+-|+.|++||++.+.
T Consensus       130 -~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~-t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d  207 (338)
T KOG0265|consen  130 -GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIK-TFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKND  207 (338)
T ss_pred             -cccceeeecCccccCCeEEEecCCCceEEEEeecccchhh-ccccceeEEEEEecccccceeeccccCceeeeccccCc
Confidence             778888888663   3568889999999999999998885 67778899999999999999999999999999999999


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-CCCccceEEEeCCC----CCe
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI-TTQRRPVLKVDIPD----VAL  235 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~----~~i  235 (444)
                      ..+.+.+|..                  .|+.+..+|.|.++++-+.|.++++||++- ....+++..+.+|.    ...
T Consensus       208 ~~~~lsGh~D------------------tIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknl  269 (338)
T KOG0265|consen  208 GLYTLSGHAD------------------TITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNL  269 (338)
T ss_pred             ceEEeecccC------------------ceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhc
Confidence            9999999998                  899999999999999999999999999982 12334466666653    345


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      ..++|+|+++++.+|+.|..+++||... ...++.++||.+.|++++|+|...+|.+++.|++|++=
T Consensus       270 L~cswsp~~~~i~ags~dr~vyvwd~~~-r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lg  335 (338)
T KOG0265|consen  270 LKCSWSPNGTKITAGSADRFVYVWDTTS-RRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLG  335 (338)
T ss_pred             ceeeccCCCCccccccccceEEEeeccc-ccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEee
Confidence            6789999999999999999999999998 89999999999999999999999999999999999873

>KOG0296|consensus

Probab=100.00  E-value=3e-38  Score=263.89  Aligned_cols=312  Identities=11%  Similarity=0.094  Sum_probs=261.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +.+.+++|+.|..-.+|++.++..      .....+|+..|+++.|+ .++.+||||..+|.|+||...++.....+...
T Consensus        75 ~~~l~aTGGgDD~AflW~~~~ge~------~~eltgHKDSVt~~~Fs-hdgtlLATGdmsG~v~v~~~stg~~~~~~~~e  147 (399)
T KOG0296|consen   75 NNNLVATGGGDDLAFLWDISTGEF------AGELTGHKDSVTCCSFS-HDGTLLATGDMSGKVLVFKVSTGGEQWKLDQE  147 (399)
T ss_pred             CCceEEecCCCceEEEEEccCCcc------eeEecCCCCceEEEEEc-cCceEEEecCCCccEEEEEcccCceEEEeecc
Confidence            778999999999999999999884      22222999999999999 79999999999999999999999888777422


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .....=+.++|.+..|+.|+.||.|.+|.+.++...+.+.+|+.++++-.|.|+|+.++++..||+|++|++.++++++.
T Consensus       148 ~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~  227 (399)
T KOG0296|consen  148 VEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHK  227 (399)
T ss_pred             cCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEE
Confidence            22333355688899999999999999999998766667899999999999999999999999999999999999999988


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--------CCCCCee
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--------IPDVALS  236 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------~~~~~i~  236 (444)
                      +....+                 ....++.++..+..++.|+.++.+++-...   .++.+..+.        .+...+.
T Consensus       228 ~~~~e~-----------------~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~---sgKVv~~~n~~~~~l~~~~e~~~e  287 (399)
T KOG0296|consen  228 ITQAEG-----------------LELPCISLNLAGSTLTKGNSEGVACGVNNG---SGKVVNCNNGTVPELKPSQEELDE  287 (399)
T ss_pred             eccccc-----------------CcCCccccccccceeEeccCCccEEEEccc---cceEEEecCCCCccccccchhhhh
Confidence            875443                 246778888888889999999988888876   555555444        2344445


Q ss_pred             EEEEcc---CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe
Q psy8152         237 CITTTN---QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       237 ~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      ++.+.|   .=.+.|+|+.||+|.|||+.. .++.+.+. |..+|+.+.|-+ ..+|++++.+|.|+.||.++|+++...
T Consensus       288 sve~~~~ss~lpL~A~G~vdG~i~iyD~a~-~~~R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y  364 (399)
T KOG0296|consen  288 SVESIPSSSKLPLAACGSVDGTIAIYDLAA-STLRHICE-HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTY  364 (399)
T ss_pred             hhhhcccccccchhhcccccceEEEEeccc-chhheecc-CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEE
Confidence            555544   456788999999999999998 77666665 889999999988 789999999999999999999998886


Q ss_pred             e-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         314 Y-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       314 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      . |...|.++++++         +.++++|++.|++.+|+...
T Consensus       365 ~GH~~~Il~f~ls~---------~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  365 TGHQMGILDFALSP---------QKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             ecCchheeEEEEcC---------CCcEEEEecCCCeEEEEecC
Confidence            5 999999999884         46899999999999998753

>KOG0319|consensus

Probab=100.00  E-value=1.7e-38  Score=287.66  Aligned_cols=318  Identities=13%  Similarity=0.125  Sum_probs=267.9

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+.++..+.+..|.+|+..+.+.       .+.+ +..+.|..|+|-.|+.++|++++..+.+++|++.+..+.   -.+
T Consensus       293 ~~~~l~vtaeQnl~l~d~~~l~i-------~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~---ii~  362 (775)
T KOG0319|consen  293 MSQLLLVTAEQNLFLYDEDELTI-------VKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ---IIP  362 (775)
T ss_pred             cCceEEEEccceEEEEEccccEE-------ehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE---EEe
Confidence            35667777788899998766553       2222 788999999998788899999999999999998887776   236


Q ss_pred             cccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCC----ccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcC
Q psy8152          85 FGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEP----DQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        85 ~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~  157 (444)
                      +|...|.++.  .+|-+|++|+.|.++++|.++.+.    ++....+|...|.+++++. ...+|+++|.|++|++|++.
T Consensus       363 GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~  442 (775)
T KOG0319|consen  363 GHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLP  442 (775)
T ss_pred             CchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCC
Confidence            9999999997  567799999999999999885443    3345678999999999987 56799999999999999998


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      ..+.....         ..+........|...|++++++|+.++||+|+.|++.+||++.   +.....++.+|...|.+
T Consensus       443 ~s~~~~~~---------~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le---~~~l~~vLsGH~RGvw~  510 (775)
T KOG0319|consen  443 KSKETAFP---------IVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLE---QLRLLGVLSGHTRGVWC  510 (775)
T ss_pred             Cccccccc---------ceehhhHHHHhhcccccceEecCCCceEEecccccceeeeccc---CceEEEEeeCCccceEE
Confidence            72211100         0000000111222369999999999999999999999999999   99999999999999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cC
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQ  316 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~  316 (444)
                      +.|+|..+.++++|.|++|+||.+.+ ..++.+|.||...|..+.|-.++..|+|++.||-|++|+++++.++.++. |.
T Consensus       511 V~Fs~~dq~laT~SgD~TvKIW~is~-fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~  589 (775)
T KOG0319|consen  511 VSFSKNDQLLATCSGDKTVKIWSIST-FSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHN  589 (775)
T ss_pred             EEeccccceeEeccCCceEEEEEecc-ceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhcc
Confidence            99999999999999999999999999 99999999999999999999999999999999999999999999999986 99


Q ss_pred             CceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         317 SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       317 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .+|++++.++.         ..+++||+.|+.+.+|.-.
T Consensus       590 DrvWaL~~~~~---------~~~~~tgg~Dg~i~~wkD~  619 (775)
T KOG0319|consen  590 DRVWALSVSPL---------LDMFVTGGGDGRIIFWKDV  619 (775)
T ss_pred             ceeEEEeecCc---------cceeEecCCCeEEEEeecC
Confidence            99999988754         4588999999999999644

>KOG0281|consensus

Probab=100.00  E-value=5.4e-40  Score=272.62  Aligned_cols=275  Identities=16%  Similarity=0.209  Sum_probs=242.0

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      ....|+|+.+.   ...+++|..|++|+|||..+..++..+.  +|.+.|.|+..+.+.|++|+.|.+|+|||+++++++
T Consensus       196 ~skgVYClQYD---D~kiVSGlrDnTikiWD~n~~~c~~~L~--GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l  270 (499)
T KOG0281|consen  196 NSKGVYCLQYD---DEKIVSGLRDNTIKIWDKNSLECLKILT--GHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPL  270 (499)
T ss_pred             cCCceEEEEec---chhhhcccccCceEEeccccHHHHHhhh--cCCCcEEeeeccceEEEecCCCceEEEEeccCCchh
Confidence            46789999987   6889999999999999999888888875  899999999999999999999999999999999999


Q ss_pred             ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce---eeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         121 WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       121 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .++++|...|..+.|+  ..++++++.|.+|.+||+....   +...+.+|..                  .|+.+.|+.
T Consensus       271 ~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrA------------------aVNvVdfd~  330 (499)
T KOG0281|consen  271 NTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------------------AVNVVDFDD  330 (499)
T ss_pred             hHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhh------------------heeeecccc
Confidence            9999999999999996  5699999999999999998754   3345566666                  799999954


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                        +++++++.|.+|++|++.   +...+.++.+|...|.|+.+  .++++++|+.|.+|++||+.. |.++..++||..-
T Consensus       331 --kyIVsASgDRTikvW~~s---t~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~-G~cLRvLeGHEeL  402 (499)
T KOG0281|consen  331 --KYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEEL  402 (499)
T ss_pred             --ceEEEecCCceEEEEecc---ceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccc-cHHHHHHhchHHh
Confidence              799999999999999999   89999999999999999988  689999999999999999999 9999999999999


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCCce---------EEE-eecCCceeEEEEcCCCcccccchhhhhccccccCC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSKKL---------LRK-DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGD  347 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~---------~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~  347 (444)
                      |.++.|  +.+.+++|+.||+|+|||+..+..         +.. ..|.++|..+.|.           ...+++.+.|.
T Consensus       403 vRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD-----------~fqIvsssHdd  469 (499)
T KOG0281|consen  403 VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-----------EFQIISSSHDD  469 (499)
T ss_pred             hhheee--cCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec-----------ceEEEeccCCC
Confidence            999999  467899999999999999987532         222 2377788887764           24688899999


Q ss_pred             CccccCCCcccccc
Q psy8152         348 SDEKYDPEHFEMNQ  361 (444)
Q Consensus       348 ~i~~W~~~~~~~~~  361 (444)
                      +|-||++..+.+.+
T Consensus       470 tILiWdFl~~~~~~  483 (499)
T KOG0281|consen  470 TILIWDFLNGPPSA  483 (499)
T ss_pred             eEEEEEcCCCCccc
Confidence            99999998765543

>KOG0291|consensus

Probab=100.00  E-value=2.7e-37  Score=280.44  Aligned_cols=324  Identities=17%  Similarity=0.258  Sum_probs=274.4

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCc------------------------ccee-eeeeeccc---CcccceEEEeeeccC
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDK------------------------CIIK-NIQNVKYI---TNKASVLALNWGNVE   54 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~------------------------~~~~-~~~~~~~~---~h~~~v~~~~~~~~~   54 (444)
                      .+++..+++.+.||.|.+|......                        ...+ .+......   .....|+|.+|+ +.
T Consensus       198 ~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH-~~  276 (893)
T KOG0291|consen  198 GANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFH-KG  276 (893)
T ss_pred             ccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeecc-CC
Confidence            3567889999999999999887211                        0000 11111111   234789999999 78


Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecC-CcEEEEEcCCCCccccccccCCCeE
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKS-GDVKLWRYKTEPDQWTNFNVGPQLE  131 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~v~  131 (444)
                      .+.|++|-..|...+|.+..-.+++.+...  ..+|..+  +..|..|+.|+.. |.+.||+..+...+.+..+|...++
T Consensus       277 t~~lvvgFssG~f~LyelP~f~lih~LSis--~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~  354 (893)
T KOG0291|consen  277 TNLLVVGFSSGEFGLYELPDFNLIHSLSIS--DQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRIT  354 (893)
T ss_pred             ceEEEEEecCCeeEEEecCCceEEEEeecc--cceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecccccccee
Confidence            899999999999999999999999888765  4455555  4559999998775 8999999999888878889999999


Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV  211 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  211 (444)
                      +++++|+|+++|+|+.||.|+|||...+-|+.++..|..                  .|+.++|+..++.+++.+.||+|
T Consensus       355 ~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts------------------~Vt~v~f~~~g~~llssSLDGtV  416 (893)
T KOG0291|consen  355 SLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS------------------GVTAVQFTARGNVLLSSSLDGTV  416 (893)
T ss_pred             eEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC------------------ceEEEEEEecCCEEEEeecCCeE
Confidence            999999999999999999999999999999999999988                  89999999999999999999999


Q ss_pred             EEEEcCCCCCccceEEEeCC-CCCeeEEEEccCCCEEEEEcCCC-cEEEEEcCCCCcceeEeccccCceeEEEecCCCCE
Q psy8152         212 RVYDPKITTQRRPVLKVDIP-DVALSCITTTNQSHYVIVGSTTG-DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       212 ~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~  289 (444)
                      +.||+.   ..+..++|... .....|++..|.|.++.+|+.|. .|+||++++ |+++-.+.||.+||.+++|+|.+..
T Consensus       417 RAwDlk---RYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT-GqllDiLsGHEgPVs~l~f~~~~~~  492 (893)
T KOG0291|consen  417 RAWDLK---RYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT-GQLLDILSGHEGPVSGLSFSPDGSL  492 (893)
T ss_pred             Eeeeec---ccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec-CeeeehhcCCCCcceeeEEccccCe
Confidence            999999   77778877754 34567899999999999998886 599999999 9999999999999999999999999


Q ss_pred             EEEEECCCcEEEEEcCCC-ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         290 ILSVSLDRHFRVHDFHSK-KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      |+++|.|.+||+|++-.. ..+.++.+...+..++|+|+         ++.++.+.-||.|.+|+.....+.
T Consensus       493 LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPd---------G~elaVaTldgqItf~d~~~~~q~  555 (893)
T KOG0291|consen  493 LASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPD---------GKELAVATLDGQITFFDIKEAVQV  555 (893)
T ss_pred             EEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCC---------CCeEEEEEecceEEEEEhhhceee
Confidence            999999999999999764 34456678888999998855         678999999999999999865443

>KOG0645|consensus

Probab=100.00  E-value=3.7e-37  Score=247.50  Aligned_cols=281  Identities=16%  Similarity=0.196  Sum_probs=235.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC---ccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK---NFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      +|.+.|..++|+|..|..||+|+.|+.|++|+...+   .+...+. .+|...|.++  +|.|++|++|+.|.++.||.-
T Consensus        12 gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld-~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k   90 (312)
T KOG0645|consen   12 GHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLD-DGHKRSVRSVAWSPHGRYLASASFDATVVIWKK   90 (312)
T ss_pred             CCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEecc-ccchheeeeeeecCCCcEEEEeeccceEEEeec
Confidence            899999999999533779999999999999998742   2333333 3677777665  689999999999999999986


Q ss_pred             CCC--CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---ceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         115 KTE--PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       115 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      ..+  +++.++.+|...|.|++|+++|++||+++.|+.|-||.+..   -.++..+..|.+                  -
T Consensus        91 ~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq------------------D  152 (312)
T KOG0645|consen   91 EDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ------------------D  152 (312)
T ss_pred             CCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc------------------c
Confidence            544  56668889999999999999999999999999999999985   346777888877                  7


Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      |..+.|+|...+|++++.|.+|++|.-.......++.++.+|...|.+++|+|.|..|++++.|++++||-...      
T Consensus       153 VK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~------  226 (312)
T KOG0645|consen  153 VKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT------  226 (312)
T ss_pred             ccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc------
Confidence            99999999999999999999999998663456788999999999999999999999999999999999998654      


Q ss_pred             Eec-cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC------ceEEEe--ecCCceeEEEEcCCCcccccchhhhhc
Q psy8152         270 KYK-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK------KLLRKD--YMQSRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       270 ~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~------~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                      .+. -|+..+..++|.  ...|++++.|+.|++|.-...      +++...  .|...|+++.|.+..+        .+|
T Consensus       227 ~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~--------~~L  296 (312)
T KOG0645|consen  227 DLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVS--------NRL  296 (312)
T ss_pred             CcchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCC--------Cce
Confidence            222 377889999997  568999999999999987653      222222  2778899999998543        789


Q ss_pred             cccccCCCccccCCC
Q psy8152         341 HSEEKGDSDEKYDPE  355 (444)
Q Consensus       341 ~s~~~d~~i~~W~~~  355 (444)
                      +++++||.+++|.+.
T Consensus       297 ~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  297 ASGGDDGIVNFWELE  311 (312)
T ss_pred             eecCCCceEEEEEec
Confidence            999999999999764

>KOG0263|consensus

Probab=100.00  E-value=5.6e-39  Score=293.57  Aligned_cols=261  Identities=18%  Similarity=0.220  Sum_probs=227.4

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .+...||.|..|..|++|.+...+.     ..++   +.      .+    -..+=+.+.|-.+.+.|........++  
T Consensus       388 ddssmlA~Gf~dS~i~~~Sl~p~kl-----~~lk---~~------~~----l~~~d~~sad~~~~~~D~~~~~~~~~L--  447 (707)
T KOG0263|consen  388 DDSSMLACGFVDSSVRVWSLTPKKL-----KKLK---DA------SD----LSNIDTESADVDVDMLDDDSSGTSRTL--  447 (707)
T ss_pred             CCcchhhccccccEEEEEecchhhh-----cccc---ch------hh----hccccccccchhhhhccccCCceeEEe--
Confidence            3456899999999999999876552     2222   11      11    112223444444666666555555544  


Q ss_pred             ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      .+|.++|..  |+|+.++|++++.|++||+|.+.+..++..+.+|..||+++.|+|.|-+|||++.|++-++|.....++
T Consensus       448 ~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~P  527 (707)
T KOG0263|consen  448 YGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKP  527 (707)
T ss_pred             ecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCc
Confidence            489999976  578999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      ++.+.+|..                  -|.|+.|+|+..|+++|+.|.+||+||+.   ++..++.|.+|..+|++++||
T Consensus       528 lRifaghls------------------DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~---~G~~VRiF~GH~~~V~al~~S  586 (707)
T KOG0263|consen  528 LRIFAGHLS------------------DVDCVSFHPNSNYVATGSSDRTVRLWDVS---TGNSVRIFTGHKGPVTALAFS  586 (707)
T ss_pred             hhhhccccc------------------ccceEEECCcccccccCCCCceEEEEEcC---CCcEEEEecCCCCceEEEEEc
Confidence            999988887                  79999999999999999999999999999   888899999999999999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      |+|++|++|+.||.|.+||+.+ +.++..+.+|++.|.++.|+.+|..||+|+.|.+|++||+..
T Consensus       587 p~Gr~LaSg~ed~~I~iWDl~~-~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  587 PCGRYLASGDEDGLIKIWDLAN-GSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             CCCceEeecccCCcEEEEEcCC-CcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence            9999999999999999999999 999999999999999999999999999999999999999875

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.2e-36  Score=272.05  Aligned_cols=280  Identities=18%  Similarity=0.278  Sum_probs=247.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|..+|++++|+ |++++|++++.+|.|++|++.+++....+.  .|...+.  .+++++++|++++.+|.|++|++.++
T Consensus         7 ~h~~~i~~~~~~-~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~   83 (289)
T cd00200           7 GHTGGVTCVAFS-PDGKLLATGSGDGTIKVWDLETGELLRTLK--GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG   83 (289)
T ss_pred             ccCCCEEEEEEc-CCCCEEEEeecCcEEEEEEeeCCCcEEEEe--cCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence            799999999999 789999999999999999999887666654  4555554  44678889999999999999999987


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +....+..|...|.++.|+|++.++++++.++.|++|++.+++....+..+..                  .|.+++|+|
T Consensus        84 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------------------~i~~~~~~~  145 (289)
T cd00200          84 ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTD------------------WVNSVAFSP  145 (289)
T ss_pred             cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCC------------------cEEEEEEcC
Confidence            77766778888999999999988999888899999999998888887776655                  699999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                      ++.++++++.++.|++||++   ..+++..+..|...+.++.|+|+++.|++++.++.|++||++. ++++..+..|...
T Consensus       146 ~~~~l~~~~~~~~i~i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~  221 (289)
T cd00200         146 DGTFVASSSQDGTIKLWDLR---TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST-GKCLGTLRGHENG  221 (289)
T ss_pred             cCCEEEEEcCCCcEEEEEcc---ccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCC-CceecchhhcCCc
Confidence            98999888889999999998   6777888888888999999999999999999999999999998 8999999889999


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      |.+++|+|++.++++++.++.|++|++.+++++..+. +...+.++.|.++         +.++++++.|+.+++|+
T Consensus       222 i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         222 VNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPD---------GKRLASGSADGTIRIWD  289 (289)
T ss_pred             eEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCC---------CCEEEEecCCCeEEecC
Confidence            9999999998888888889999999999888877765 6778999998754         46899999999999996

>KOG0281|consensus

Probab=100.00  E-value=7.7e-39  Score=265.79  Aligned_cols=264  Identities=16%  Similarity=0.239  Sum_probs=232.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +...+++|..|++|+|||..+-.+       +..+ +|++.|.|+.|.   ...|++|+.|.+|+|||+++++++.++- 
T Consensus       206 DD~kiVSGlrDnTikiWD~n~~~c-------~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWDv~tge~l~tli-  274 (499)
T KOG0281|consen  206 DDEKIVSGLRDNTIKIWDKNSLEC-------LKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGEPLNTLI-  274 (499)
T ss_pred             cchhhhcccccCceEEeccccHHH-------HHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEeccCCchhhHHh-
Confidence            457899999999999999776654       2222 999999999998   5699999999999999999999999875 


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc---ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ---WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                       .|...|..+-+.+.++++++.|.++.+|++.....+   ..+.+|...|+.+.|+  .+++++++.|.+|++|++.++.
T Consensus       275 -hHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~e  351 (499)
T KOG0281|consen  275 -HHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCE  351 (499)
T ss_pred             -hhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEecccee
Confidence             789999999999999999999999999999876533   3677899999999994  5799999999999999999999


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITT  240 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~  240 (444)
                      .+.++.+|..                  .|-|+.+  .++++++|+.|.+|++||+.   .+.++..+.+|+.-|.++.|
T Consensus       352 fvRtl~gHkR------------------GIAClQY--r~rlvVSGSSDntIRlwdi~---~G~cLRvLeGHEeLvRciRF  408 (499)
T KOG0281|consen  352 FVRTLNGHKR------------------GIACLQY--RDRLVVSGSSDNTIRLWDIE---CGACLRVLEGHEELVRCIRF  408 (499)
T ss_pred             eehhhhcccc------------------cceehhc--cCeEEEecCCCceEEEEecc---ccHHHHHHhchHHhhhheee
Confidence            9999999988                  6888888  56999999999999999999   89999999999999999999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCc---------ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGK---------PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                        +.+.|++|..||+|+|||+.. +.         ++.++..|++.|..+.|  +...+++++.|.+|.|||+.++..-
T Consensus       409 --d~krIVSGaYDGkikvWdl~a-aldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~  482 (499)
T KOG0281|consen  409 --DNKRIVSGAYDGKIKVWDLQA-ALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS  482 (499)
T ss_pred             --cCceeeeccccceEEEEeccc-ccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence              567899999999999999987 32         34555679999999999  4568999999999999999886553

>KOG0276|consensus

Probab=100.00  E-value=1.4e-37  Score=276.62  Aligned_cols=264  Identities=16%  Similarity=0.195  Sum_probs=240.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      .|...|.++.|+ |....++++-..|.|.||+.++...++.|....-..+...|-+..+.+++|+.|..|+||++.+++.
T Consensus        11 ~rSdRVKsVd~H-PtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ek   89 (794)
T KOG0276|consen   11 SRSDRVKSVDFH-PTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEK   89 (794)
T ss_pred             ccCCceeeeecC-CCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccccee
Confidence            588999999999 7899999999999999999999999999976533333344556678899999999999999999999


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      +..+..|...|.|++.+|...++++++.|-+|++||... -.+.+++.+|.+                  .|.+++|+|.
T Consensus        90 V~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~H------------------yVMqv~fnPk  151 (794)
T KOG0276|consen   90 VKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEH------------------YVMQVAFNPK  151 (794)
T ss_pred             eEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcce------------------EEEEEEecCC
Confidence            998999999999999999999999999999999999987 467788999999                  8999999997


Q ss_pred             C-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC--CEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         199 S-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS--HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       199 ~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      . +.+|+++-|++|++|.+.   +..+..++.+|...|+|+.|-+.|  .+|++|+.|.+|+|||.++ ..+++++.||.
T Consensus       152 D~ntFaS~sLDrTVKVWslg---s~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt-k~CV~TLeGHt  227 (794)
T KOG0276|consen  152 DPNTFASASLDRTVKVWSLG---SPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT-KSCVQTLEGHT  227 (794)
T ss_pred             CccceeeeeccccEEEEEcC---CCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch-HHHHHHhhccc
Confidence            6 899999999999999999   899999999999999999998754  6999999999999999999 99999999999


Q ss_pred             CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcC
Q psy8152         276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRS  326 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~  326 (444)
                      ..|..+.|+|.-+++++|+.||++|||+..+.++..++. ...+++|++-..
T Consensus       228 ~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k  279 (794)
T KOG0276|consen  228 NNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHK  279 (794)
T ss_pred             ccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecC
Confidence            999999999999999999999999999999988887765 567899988653

>KOG0291|consensus

Probab=100.00  E-value=1.8e-36  Score=275.06  Aligned_cols=319  Identities=12%  Similarity=0.142  Sum_probs=269.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-CeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-QKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-~~i~vw~~~~~~~~~~~~~~   84 (444)
                      -+.|++|-..|.+.+|.+.....    ++.+..  -..+|..++|+ ..|++|+.|+.. |++.||+.++...+...+  
T Consensus       277 t~~lvvgFssG~f~LyelP~f~l----ih~LSi--s~~~I~t~~~N-~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ--  347 (893)
T KOG0291|consen  277 TNLLVVGFSSGEFGLYELPDFNL----IHSLSI--SDQKILTVSFN-STGDWIAFGCSKLGQLLVWEWQSESYVLKQQ--  347 (893)
T ss_pred             ceEEEEEecCCeeEEEecCCceE----EEEeec--ccceeeEEEec-ccCCEEEEcCCccceEEEEEeeccceeeecc--
Confidence            46799999999999999877664    233332  24789999999 899999998775 899999998877776654  


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      +|...+.++  +|||+++++|+.||+|+|||..++-|..++..|...|+.+.|+..++.+++++-||+|+.||+...+..
T Consensus       348 gH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNf  427 (893)
T KOG0291|consen  348 GHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNF  427 (893)
T ss_pred             ccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccccee
Confidence            777777665  899999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-eEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-YVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      .++..+..                 ....|++..|.|.++++|+.|. .|.+|++.   +++.+-.+.+|.+||.+++|+
T Consensus       428 RTft~P~p-----------------~QfscvavD~sGelV~AG~~d~F~IfvWS~q---TGqllDiLsGHEgPVs~l~f~  487 (893)
T KOG0291|consen  428 RTFTSPEP-----------------IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQ---TGQLLDILSGHEGPVSGLSFS  487 (893)
T ss_pred             eeecCCCc-----------------eeeeEEEEcCCCCEEEeeccceEEEEEEEee---cCeeeehhcCCCCcceeeEEc
Confidence            88765543                 3578899999999999998887 59999999   899999999999999999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-------
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-------  314 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-------  314 (444)
                      |.+..|++++.|.+|++||+-.....+.++. +...++.++|+|+|+.|++++.||.|.+||+..+..+..+.       
T Consensus       488 ~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~  566 (893)
T KOG0291|consen  488 PDGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSG  566 (893)
T ss_pred             cccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccc
Confidence            9999999999999999999986334555665 67789999999999999999999999999998765553322       


Q ss_pred             --------------cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         315 --------------MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       315 --------------~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                                    .....+.++++         +++..+++|+..+.|.++++..+.+.+..
T Consensus       567 gR~~~D~~ta~~sa~~K~Ftti~yS---------aDG~~IlAgG~sn~iCiY~v~~~vllkkf  620 (893)
T KOG0291|consen  567 GRKETDRITAENSAKGKTFTTICYS---------ADGKCILAGGESNSICIYDVPEGVLLKKF  620 (893)
T ss_pred             cccccceeehhhcccCCceEEEEEc---------CCCCEEEecCCcccEEEEECchhheeeeE
Confidence                          11335555555         55789999999999999999987766544

>KOG0316|consensus

Probab=100.00  E-value=2.5e-37  Score=243.57  Aligned_cols=261  Identities=16%  Similarity=0.191  Sum_probs=226.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      .|.++|.++.|+ .+++|.++++.|.+|++|+...+.+++++..++|...-.+++.++..|++|+.|..|.+||+.+|+.
T Consensus        15 ~~qgaV~avryN-~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv   93 (307)
T KOG0316|consen   15 CAQGAVRAVRYN-VDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKV   93 (307)
T ss_pred             ccccceEEEEEc-cCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCee
Confidence            789999999999 8999999999999999999999999999985555444445578999999999999999999999999


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC--ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT--TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .+.+.+|.+.|+.++|+.+...+++|+.|..+++||.+.  .++++.+.....                  .|.++..+.
T Consensus        94 ~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D------------------~V~Si~v~~  155 (307)
T KOG0316|consen   94 DRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD------------------GVSSIDVAE  155 (307)
T ss_pred             eeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcC------------------ceeEEEecc
Confidence            999999999999999999999999999999999999987  457777766655                  688888854


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                        ..|++|+.||++|.||++   .+.......  ..+|++++|+++++.+++++.+++|++.|-.+ ++++..+++|...
T Consensus       156 --heIvaGS~DGtvRtydiR---~G~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~t-GklL~sYkGhkn~  227 (307)
T KOG0316|consen  156 --HEIVAGSVDGTVRTYDIR---KGTLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKET-GKLLKSYKGHKNM  227 (307)
T ss_pred             --cEEEeeccCCcEEEEEee---cceeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccch-hHHHHHhcccccc
Confidence              789999999999999999   665554433  45799999999999999999999999999999 9999999999775


Q ss_pred             ee--EEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc--eeEEEEcCC
Q psy8152         278 VK--DIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR--LTSILVRSD  327 (444)
Q Consensus       278 i~--~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~--i~~~~~~~~  327 (444)
                      -.  .++++.....+++|+.||.|++||+.....+..+.+.+.  +..+.+.|.
T Consensus       228 eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~  281 (307)
T KOG0316|consen  228 EYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPT  281 (307)
T ss_pred             eeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccC
Confidence            43  446666678999999999999999999999998886655  456665544

>KOG0282|consensus

Probab=100.00  E-value=1e-38  Score=275.94  Aligned_cols=282  Identities=15%  Similarity=0.195  Sum_probs=243.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      +|+..|+++.|.|..+.+|++++.|+.|+||++-. ++++++|.  +|..+|.++  +.+|..+++++.|+.|++||+++
T Consensus       212 gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~--gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtET  289 (503)
T KOG0282|consen  212 GHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFK--GHRKPVRDASFNNCGTSFLSASFDRFLKLWDTET  289 (503)
T ss_pred             CCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhh--cchhhhhhhhccccCCeeeeeecceeeeeecccc
Confidence            99999999999955889999999999999999876 88899886  778888665  56789999999999999999999


Q ss_pred             CCccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      |+++. .+.....++|+.|+|++ +.+++|+.|+.|+.||+++++.++.+..|-+                  .|..+.|
T Consensus       290 G~~~~-~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg------------------~i~~i~F  350 (503)
T KOG0282|consen  290 GQVLS-RFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLG------------------AILDITF  350 (503)
T ss_pred             ceEEE-EEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhh------------------heeeeEE
Confidence            99985 55667789999999966 8999999999999999999999988877777                  7999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC--CcceeEec
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK--GKPCYKYK  272 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~  272 (444)
                      -++++++++.+.|++++||+.+   ...++... ..+.....++..+|+++++++-+.++.|.+|.+..+  ......|.
T Consensus       351 ~~~g~rFissSDdks~riWe~~---~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~fe  427 (503)
T KOG0282|consen  351 VDEGRRFISSSDDKSVRIWENR---IPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFE  427 (503)
T ss_pred             ccCCceEeeeccCccEEEEEcC---CCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhc
Confidence            9999999999999999999998   44444332 233445678999999999999999999999997652  23445667


Q ss_pred             ccc--CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152         273 GFA--GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD  349 (444)
Q Consensus       273 ~h~--~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i  349 (444)
                      +|.  +.-+.+.|||+|.+|++|..+|.+.+||.++-+++.++. |.+++..+.|.|.-.        ..+++++.+|.|
T Consensus       428 Gh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~--------Skvat~~w~G~I  499 (503)
T KOG0282|consen  428 GHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEP--------SKVATCGWDGLI  499 (503)
T ss_pred             ceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCc--------ceeEecccCcee
Confidence            775  456778999999999999999999999999999998887 778899999887643        579999999999


Q ss_pred             cccC
Q psy8152         350 EKYD  353 (444)
Q Consensus       350 ~~W~  353 (444)
                      ++|+
T Consensus       500 kiwd  503 (503)
T KOG0282|consen  500 KIWD  503 (503)
T ss_pred             EecC
Confidence            9996

>KOG0318|consensus

Probab=100.00  E-value=3e-36  Score=263.09  Aligned_cols=321  Identities=14%  Similarity=0.138  Sum_probs=259.6

Q ss_pred             CCCCcccEEEecCCCcEEEEEcCCCccceeeee-eecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           2 TLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQ-NVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         2 s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      -+.++.++++|+.|+.|.+|.=..-+     |+ ...  .|..-|.|+.|+ |++.++++++.||+|.+||=.+++.+..
T Consensus       156 KpsRPfRi~T~sdDn~v~ffeGPPFK-----Fk~s~r--~HskFV~~VRys-PDG~~Fat~gsDgki~iyDGktge~vg~  227 (603)
T KOG0318|consen  156 KPSRPFRIATGSDDNTVAFFEGPPFK-----FKSSFR--EHSKFVNCVRYS-PDGSRFATAGSDGKIYIYDGKTGEKVGE  227 (603)
T ss_pred             cCCCceEEEeccCCCeEEEeeCCCee-----eeeccc--ccccceeeEEEC-CCCCeEEEecCCccEEEEcCCCccEEEE
Confidence            46778999999999999999833222     22 122  799999999999 7999999999999999999999999888


Q ss_pred             ee-eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccccccc---CCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152          81 TD-VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV---GPQLECMKHNKHSNIIATGGKENDLKLW  154 (444)
Q Consensus        81 ~~-~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~vw  154 (444)
                      +. ..+|.+.|.++  +||+..|++++.|.+++|||+.+.+++.++.-.   ......+-|.  ...|++.+.+|.|.++
T Consensus       228 l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~l  305 (603)
T KOG0318|consen  228 LEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYL  305 (603)
T ss_pred             ecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEe
Confidence            76 45788888877  589999999999999999999999888643322   1333444553  6789999999999999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc--------ceE
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR--------PVL  226 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--------~~~  226 (444)
                      +...+.++..+.+|..                  .|+++..+|++++|++|+.||.|.-|+.......+        .+.
T Consensus       306 n~~d~~~~~~i~GHnK------------------~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~  367 (603)
T KOG0318|consen  306 NPSDPSVLKVISGHNK------------------SITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIK  367 (603)
T ss_pred             cccCCChhheeccccc------------------ceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEE
Confidence            9999999999999988                  79999999999999999999999999986211100        000


Q ss_pred             EE--------------------------------------------------------------eC--------CCCCee
Q psy8152         227 KV--------------------------------------------------------------DI--------PDVALS  236 (444)
Q Consensus       227 ~~--------------------------------------------------------------~~--------~~~~i~  236 (444)
                      .+                                                              +.        -.....
T Consensus       368 ~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s  447 (603)
T KOG0318|consen  368 GMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESS  447 (603)
T ss_pred             EEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccc
Confidence            00                                                              00        012235


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE--
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK--  312 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~--  312 (444)
                      +++++|+++++++|+.|+.|+||.+.. ...  ...+..|.++|++++|||++.+||++...+.+.+|++.+++....  
T Consensus       448 ~vAv~~~~~~vaVGG~Dgkvhvysl~g-~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w  526 (603)
T KOG0318|consen  448 AVAVSPDGSEVAVGGQDGKVHVYSLSG-DELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRW  526 (603)
T ss_pred             eEEEcCCCCEEEEecccceEEEEEecC-CcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceeccee
Confidence            678899999999999999999999986 443  334557999999999999999999999999999999999877433  


Q ss_pred             eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         313 DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      .+|..+|++++|+|+         ..+++||+.|..|.||.+..+...
T Consensus       527 ~FHtakI~~~aWsP~---------n~~vATGSlDt~Viiysv~kP~~~  565 (603)
T KOG0318|consen  527 AFHTAKINCVAWSPN---------NKLVATGSLDTNVIIYSVKKPAKH  565 (603)
T ss_pred             eeeeeeEEEEEeCCC---------ceEEEeccccceEEEEEccChhhh
Confidence            349999999999855         579999999999999999865543

>KOG0306|consensus

Probab=100.00  E-value=8e-37  Score=277.23  Aligned_cols=320  Identities=15%  Similarity=0.123  Sum_probs=266.0

Q ss_pred             cCCCcEEEEEcCCCcc---ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecccccc
Q psy8152          13 SSTGAFKGVNLSKDKC---IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGD   89 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~   89 (444)
                      -.++.+..|.+.....   .......+...+|...|.+++++ .+...+++|+. +.|++|+..+.++++++.+.  ..-
T Consensus       341 l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS-~d~~~~~Sga~-~SikiWn~~t~kciRTi~~~--y~l  416 (888)
T KOG0306|consen  341 LANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVS-SDSILLASGAG-ESIKIWNRDTLKCIRTITCG--YIL  416 (888)
T ss_pred             eecCceEEEEeccCCCCCccccccceeeeccchhheeEEEee-cCceeeeecCC-CcEEEEEccCcceeEEeccc--cEE
Confidence            6677888888865221   12233445555999999999999 56666666655 79999999999999998643  333


Q ss_pred             EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152          90 IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus        90 v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      ...|.|.++++++|...|.+.+||+.+...+.....|.+.|++++.+|++..+++|+.|.+|++||..-..   ..++..
T Consensus       417 ~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~---~~~gt~  493 (888)
T KOG0306|consen  417 ASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVV---SVPGTQ  493 (888)
T ss_pred             EEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEe---ccCccc
Confidence            34567899999999999999999999999888888999999999999999999999999999999975311   111111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                      .++  +++.. ...+.....|.|+.+||++++|+++--|.++++|-+.   +.+...++.+|.-||.||..+|++++++|
T Consensus       494 ~k~--lsl~~-~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflD---tlKFflsLYGHkLPV~smDIS~DSklivT  567 (888)
T KOG0306|consen  494 KKV--LSLKH-TRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLD---TLKFFLSLYGHKLPVLSMDISPDSKLIVT  567 (888)
T ss_pred             cee--eeecc-ceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEec---ceeeeeeecccccceeEEeccCCcCeEEe
Confidence            110  11100 0112223369999999999999999999999999999   88889999999999999999999999999


Q ss_pred             EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCC
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDF  328 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~  328 (444)
                      |+.|.+|+||-+.- |.+...+-+|...|.++.|.|...++.++|.|+.|+-||-..-+.+.++. |...|+|++..++ 
T Consensus       568 gSADKnVKiWGLdF-GDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~-  645 (888)
T KOG0306|consen  568 GSADKNVKIWGLDF-GDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPN-  645 (888)
T ss_pred             ccCCCceEEecccc-chhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCC-
Confidence            99999999999999 99999999999999999999999999999999999999999988888886 9999999998744 


Q ss_pred             cccccchhhhhccccccCCCccccCCC
Q psy8152         329 SLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                              |.+++|++.|..||+|...
T Consensus       646 --------G~~vvs~shD~sIRlwE~t  664 (888)
T KOG0306|consen  646 --------GSFVVSSSHDKSIRLWERT  664 (888)
T ss_pred             --------CCeEEeccCCceeEeeecc
Confidence                    7899999999999999744

>KOG0266|consensus

Probab=100.00  E-value=9.4e-37  Score=286.23  Aligned_cols=282  Identities=17%  Similarity=0.242  Sum_probs=242.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc--cccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEc-
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN--FNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRY-  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~-  114 (444)
                      .|...|+++.|+ +++..|++++.++.+++|+..+.+  ....+  .+|...|..  |+|+++++++++.|++|+||++ 
T Consensus       157 ~~~~sv~~~~fs-~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l--~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~  233 (456)
T KOG0266|consen  157 HECPSVTCVDFS-PDGRALAAASSDGLIRIWKLEGIKSNLLREL--SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK  233 (456)
T ss_pred             cccCceEEEEEc-CCCCeEEEccCCCcEEEeecccccchhhccc--cccccceeeeEECCCCcEEEEecCCceEEEeecc
Confidence            347899999999 799999999999999999997777  55554  467776654  5789999999999999999999 


Q ss_pred             CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ..+..++.+.+|...|++++|+|+++++++|+.|++|+|||+++++++..+.+|..                  .|++++
T Consensus       234 ~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~------------------~is~~~  295 (456)
T KOG0266|consen  234 DDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD------------------GISGLA  295 (456)
T ss_pred             CCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC------------------ceEEEE
Confidence            55577778889999999999999999999999999999999999999999999998                  899999


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCcc--ceEEEeCCCCC--eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRR--PVLKVDIPDVA--LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      |++++.+|++++.|+.|++||+.   ...  ++..+..+...  +++++|+|++.+|++++.|+.+++|++.. +..+..
T Consensus       296 f~~d~~~l~s~s~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~-~~~~~~  371 (456)
T KOG0266|consen  296 FSPDGNLLVSASYDGTIRVWDLE---TGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRS-GKSVGT  371 (456)
T ss_pred             ECCCCCEEEEcCCCccEEEEECC---CCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccC-Ccceee
Confidence            99999999999999999999999   554  45566665544  99999999999999999999999999999 999999


Q ss_pred             eccccCce---eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-c-CCceeEEEEcCCCcccccchhhhhccccc-
Q psy8152         271 YKGFAGCV---KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-M-QSRLTSILVRSDFSLENETKKEEQEHSEE-  344 (444)
Q Consensus       271 ~~~h~~~i---~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~-  344 (444)
                      +.+|...+   .+...++.+.++++|+.|+.|++|++.++..+..+. | ...+..+.+++.         ..++++.+ 
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~---------~~~~~s~s~  442 (456)
T KOG0266|consen  372 YTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPT---------ENLIASSSF  442 (456)
T ss_pred             ecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCC---------cCeeeecCc
Confidence            99987753   334556788999999999999999999988777765 5 455666665543         46777777 


Q ss_pred             -cCCCccccCCC
Q psy8152         345 -KGDSDEKYDPE  355 (444)
Q Consensus       345 -~d~~i~~W~~~  355 (444)
                       .|+.+++|...
T Consensus       443 ~~d~~~~~w~~~  454 (456)
T KOG0266|consen  443 EGDGLIRLWKYD  454 (456)
T ss_pred             CCCceEEEecCC
Confidence             78999999754

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=4.7e-36  Score=302.25  Aligned_cols=306  Identities=14%  Similarity=0.159  Sum_probs=242.6

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC----ccc--cceeeccccc
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK----NFN--TNTDVSFGEG   88 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~----~~~--~~~~~~~~~~   88 (444)
                      +|.+++|+...... ...+..-....|...|++++|+ +++++|++|+.|+.|+||++...    ...  ..... .+..
T Consensus       457 ~gl~~~~~~~~~~~-~~~~~~~~~~~~~~~V~~i~fs-~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~  533 (793)
T PLN00181        457 EGLCKYLSFSKLRV-KADLKQGDLLNSSNLVCAIGFD-RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRS  533 (793)
T ss_pred             hhhhhhhcccceEE-EEeeccccccCCCCcEEEEEEC-CCCCEEEEEeCCCEEEEEECCcccccccccccceEEe-cccC
Confidence            56778888765542 1111111122699999999999 79999999999999999997532    111  01111 2234


Q ss_pred             cEEEEE--e-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          89 DIVGVS--R-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        89 ~v~~~s--~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .+.++.  + .+.+|++++.||+|++||+.+++.+..+..|...|++++|+| ++.+|++|+.|+.|++||++++..+..
T Consensus       534 ~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~  613 (793)
T PLN00181        534 KLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT  613 (793)
T ss_pred             ceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEE
Confidence            454443  3 468899999999999999999888877888999999999997 789999999999999999999888877


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEe-cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      +..+.                   .|.++.|+ +++.+|++|+.|+.|++||++  ....++..+.+|...|.++.|. +
T Consensus       614 ~~~~~-------------------~v~~v~~~~~~g~~latgs~dg~I~iwD~~--~~~~~~~~~~~h~~~V~~v~f~-~  671 (793)
T PLN00181        614 IKTKA-------------------NICCVQFPSESGRSLAFGSADHKVYYYDLR--NPKLPLCTMIGHSKTVSYVRFV-D  671 (793)
T ss_pred             EecCC-------------------CeEEEEEeCCCCCEEEEEeCCCeEEEEECC--CCCccceEecCCCCCEEEEEEe-C
Confidence            76543                   48899996 468999999999999999998  2233567788999999999997 6


Q ss_pred             CCEEEEEcCCCcEEEEEcCCC-----CcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGK-----GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----  314 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----  314 (444)
                      +.+|++++.|++|+|||++..     ..++.++.+|...++.++|+|++++|++|+.|+.|++|+.....++....    
T Consensus       672 ~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~  751 (793)
T PLN00181        672 SSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTI  751 (793)
T ss_pred             CCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccC
Confidence            789999999999999999741     36788899999999999999999999999999999999987654432221    


Q ss_pred             ----------cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         315 ----------MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       315 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                                +...|.+++|++         ++..+++++.+|.|+||++
T Consensus       752 ~~~~~~~~~~~~~~V~~v~ws~---------~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        752 DPVSGLEVDDASQFISSVCWRG---------QSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             CcccccccCCCCcEEEEEEEcC---------CCCeEEEecCCCcEEEEec
Confidence                      234578888764         4578999999999999986

>KOG0282|consensus

Probab=100.00  E-value=1.9e-37  Score=268.09  Aligned_cols=275  Identities=11%  Similarity=0.104  Sum_probs=234.3

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +...+.|++++.|+.|+||++-..+.      .+..+ +|..+|..++|+ +.+..|++++.|+.|++||+++|+++..|
T Consensus       224 p~~~hLlLS~gmD~~vklW~vy~~~~------~lrtf~gH~k~Vrd~~~s-~~g~~fLS~sfD~~lKlwDtETG~~~~~f  296 (503)
T KOG0282|consen  224 PKKGHLLLSGGMDGLVKLWNVYDDRR------CLRTFKGHRKPVRDASFN-NCGTSFLSASFDRFLKLWDTETGQVLSRF  296 (503)
T ss_pred             cceeeEEEecCCCceEEEEEEecCcc------eehhhhcchhhhhhhhcc-ccCCeeeeeecceeeeeeccccceEEEEE
Confidence            45678999999999999999977442      23333 999999999999 89999999999999999999999999998


Q ss_pred             eeccccccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          82 DVSFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        82 ~~~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      .. ++...+..+.|++ +.+++|+.|+.|+.||+++++.++.+-.|-+.|..+.|-+++..+++++.|+.++||+.+.+.
T Consensus       297 ~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v  375 (503)
T KOG0282|consen  297 HL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPV  375 (503)
T ss_pred             ec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCc
Confidence            64 4455666778887 789999999999999999999998888899999999999999999999999999999999876


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC--CCeeEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD--VALSCI  238 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~i~~~  238 (444)
                      ++.....+..                 ....++..+|+++++++-+.|..|.+|.+...-.......+.+|.  +.-..+
T Consensus       376 ~ik~i~~~~~-----------------hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v  438 (503)
T KOG0282|consen  376 PIKNIADPEM-----------------HTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQV  438 (503)
T ss_pred             cchhhcchhh-----------------ccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeE
Confidence            6544322221                 147789999999999999999999999977111222333456663  345678


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEE
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHD  303 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~  303 (444)
                      .|||+|.+|++|+.+|.+.+||.++ .+.+..+++|.+++..+.|+|.. ..+|+++.+|.|++|+
T Consensus       439 ~fSpDG~~l~SGdsdG~v~~wdwkt-~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  439 DFSPDGRTLCSGDSDGKVNFWDWKT-TKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             EEcCCCCeEEeecCCccEEEeechh-hhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            9999999999999999999999999 99999999999999999999976 5899999999999996

>KOG0313|consensus

Probab=100.00  E-value=4e-36  Score=252.35  Aligned_cols=272  Identities=17%  Similarity=0.194  Sum_probs=229.5

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccC--CcEEEEEEcCCeEEEEeCCCCccccc--e
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVE--ESELLIAYSGQKIKIYDTDFKNFNTN--T   81 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~~~~~d~~i~vw~~~~~~~~~~--~   81 (444)
                      ...|++|++||.+++|+.....  .   ..+.  +|.++|.+++|.-++  ...|++++.|.++++|....+.....  .
T Consensus       115 ~~~IltgsYDg~~riWd~~Gk~--~---~~~~--Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~  187 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDLKGKS--I---KTIV--GHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALK  187 (423)
T ss_pred             CceEEEeecCCeeEEEecCCce--E---EEEe--cCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHh
Confidence            5789999999999999987654  1   2222  999999999986322  34699999999999999887665432  3


Q ss_pred             eeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCC-------------------------CCccccccccCCCeEEEE
Q psy8152          82 DVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKT-------------------------EPDQWTNFNVGPQLECMK  134 (444)
Q Consensus        82 ~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~-------------------------~~~~~~~~~~~~~v~~~~  134 (444)
                      .+.+|...|-+++  +++..+++|+.|.+|.||+..+                         +.++..+.+|..+|.++.
T Consensus       188 ~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~  267 (423)
T KOG0313|consen  188 VCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVV  267 (423)
T ss_pred             HhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEE
Confidence            3459999998885  6889999999999999999321                         112335778999999999


Q ss_pred             EeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEE
Q psy8152         135 HNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVY  214 (444)
Q Consensus       135 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~  214 (444)
                      |++ ...+++++.|.+|+.||+.++..+.++.+...                   ++++.++|..++|++|+.|..|++|
T Consensus       268 w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ks-------------------l~~i~~~~~~~Ll~~gssdr~irl~  327 (423)
T KOG0313|consen  268 WSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKS-------------------LNCISYSPLSKLLASGSSDRHIRLW  327 (423)
T ss_pred             EcC-CCceEeecccceEEEEEeecccceeeeecCcc-------------------eeEeecccccceeeecCCCCceeec
Confidence            997 77899999999999999999999988877666                   9999999999999999999999999


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      |.++.......++|.+|.+.|.++.|+|.. ..|++|+.|+++++||+|+...+++.+.+|...|.++.|+ ++.+|++|
T Consensus       328 DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSG  406 (423)
T KOG0313|consen  328 DPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSG  406 (423)
T ss_pred             CCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEec
Confidence            999555556677899999999999999975 5577899999999999999444999999999999999996 56799999


Q ss_pred             ECCCcEEEEEcC
Q psy8152         294 SLDRHFRVHDFH  305 (444)
Q Consensus       294 ~~dg~i~vw~~~  305 (444)
                      +.|.+|+|+.-.
T Consensus       407 GaD~~l~i~~~~  418 (423)
T KOG0313|consen  407 GADNKLRIFKGS  418 (423)
T ss_pred             cCcceEEEeccc
Confidence            999999998753

>KOG0285|consensus

Probab=100.00  E-value=2.4e-36  Score=251.83  Aligned_cols=269  Identities=11%  Similarity=0.202  Sum_probs=239.0

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      -+.+|++|+.|++|+|||+.+++.      .+...+|...|..+++| +...||++++.|+.|+.||+...+.++.+  +
T Consensus       162 ~n~wf~tgs~DrtikIwDlatg~L------kltltGhi~~vr~vavS-~rHpYlFs~gedk~VKCwDLe~nkvIR~Y--h  232 (460)
T KOG0285|consen  162 GNEWFATGSADRTIKIWDLATGQL------KLTLTGHIETVRGVAVS-KRHPYLFSAGEDKQVKCWDLEYNKVIRHY--H  232 (460)
T ss_pred             CceeEEecCCCceeEEEEcccCeE------EEeecchhheeeeeeec-ccCceEEEecCCCeeEEEechhhhhHHHh--c
Confidence            468999999999999999999984      22223899999999999 78999999999999999999999999987  5


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      +|-..|.++  .|.-..|++|+.|.+++|||+++...+..+.+|..+|..+.+.|-...+++|+.|++|++||++.++..
T Consensus       233 GHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~  312 (460)
T KOG0285|consen  233 GHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTM  312 (460)
T ss_pred             cccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCcee
Confidence            888888877  577889999999999999999999999889999999999999997778999999999999999999999


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      .++..|..                  .|++++.+|....+|+++.| .|+-|++.   .+..+..+.+|...|.+++.+.
T Consensus       313 ~tlt~hkk------------------svral~lhP~e~~fASas~d-nik~w~~p---~g~f~~nlsgh~~iintl~~ns  370 (460)
T KOG0285|consen  313 ITLTHHKK------------------SVRALCLHPKENLFASASPD-NIKQWKLP---EGEFLQNLSGHNAIINTLSVNS  370 (460)
T ss_pred             Eeeecccc------------------eeeEEecCCchhhhhccCCc-cceeccCC---ccchhhccccccceeeeeeecc
Confidence            99988887                  79999999999999998887 69999999   7888888999999999999988


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEec-----c---ccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-----G---FAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++ ++++|+.+|.|.+||.++ +...+.++     |   ....|.+.+|...|..|++|..|.+|++|.-..
T Consensus       371 D~-v~~~G~dng~~~fwdwks-g~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe  440 (460)
T KOG0285|consen  371 DG-VLVSGGDNGSIMFWDWKS-GHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE  440 (460)
T ss_pred             Cc-eEEEcCCceEEEEEecCc-CcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence            76 788999999999999998 66555442     1   235788999999999999999999999997543

>KOG0293|consensus

Probab=100.00  E-value=4.4e-36  Score=254.66  Aligned_cols=284  Identities=15%  Similarity=0.150  Sum_probs=236.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-cccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      .|...|+-+.|| ++|++||+|+.|.+..+|.+.... ......+.+|..+|..  +||+.++|++|+.+..+.+||+.+
T Consensus       222 ~htdEVWfl~FS-~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~t  300 (519)
T KOG0293|consen  222 DHTDEVWFLQFS-HNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDT  300 (519)
T ss_pred             hCCCcEEEEEEc-CCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCc
Confidence            899999999999 899999999999999999975433 3333344577777754  589999999999999999999999


Q ss_pred             CCccccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         117 EPDQWTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       117 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      +.+.. ..+  +...+.+++|.|+|..+++|+.|+.|..||+.. ..+...++...                 ..|.+++
T Consensus       301 gd~~~-~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~-----------------~~v~dla  361 (519)
T KOG0293|consen  301 GDLRH-LYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRD-----------------PKVHDLA  361 (519)
T ss_pred             chhhh-hcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc-chhhccccccc-----------------ceeEEEE
Confidence            99886 444  458899999999999999999999999999974 33444443332                 1499999


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      .++||+++++.+.|..|++|+..   ...... +.....+|++++.|.+++++++.-.+..|++||+.. .+.+.++.||
T Consensus       362 it~Dgk~vl~v~~d~~i~l~~~e---~~~dr~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e-~~lv~kY~Gh  436 (519)
T KOG0293|consen  362 ITYDGKYVLLVTVDKKIRLYNRE---ARVDRG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEE-NKLVRKYFGH  436 (519)
T ss_pred             EcCCCcEEEEEecccceeeechh---hhhhhc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecch-hhHHHHhhcc
Confidence            99999999999999999999988   333332 233556799999999999999999999999999998 9999999999


Q ss_pred             cCc--eeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         275 AGC--VKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       275 ~~~--i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                      +..  |..-+|-. +..++++|+.|+.|+||+..+++++..+. |...|++++|+|.        ++.++||+++||+||
T Consensus       437 kq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~--------~p~m~ASasDDgtIR  508 (519)
T KOG0293|consen  437 KQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPA--------DPEMFASASDDGTIR  508 (519)
T ss_pred             cccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCC--------CHHHhhccCCCCeEE
Confidence            764  33345643 44799999999999999999999999987 9999999999875        347999999999999


Q ss_pred             ccCCCc
Q psy8152         351 KYDPEH  356 (444)
Q Consensus       351 ~W~~~~  356 (444)
                      ||....
T Consensus       509 IWg~~~  514 (519)
T KOG0293|consen  509 IWGPSD  514 (519)
T ss_pred             EecCCc
Confidence            998764

>KOG0266|consensus

Probab=100.00  E-value=2.5e-35  Score=276.59  Aligned_cols=275  Identities=17%  Similarity=0.237  Sum_probs=239.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeC-CCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDT-DFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~-~~~~~~~~~~   82 (444)
                      .++..+++++.++.+++|+....+.  .....+  .+|...|.+++|+ |++.++++|+.|++|+||++ ..+..++++.
T Consensus       169 ~~g~~l~~~~~~~~i~~~~~~~~~~--~~~~~l--~~h~~~v~~~~fs-~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~  243 (456)
T KOG0266|consen  169 PDGRALAAASSDGLIRIWKLEGIKS--NLLREL--SGHTRGVSDVAFS-PDGSYLLSGSDDKTLRIWDLKDDGRNLKTLK  243 (456)
T ss_pred             CCCCeEEEccCCCcEEEeecccccc--hhhccc--cccccceeeeEEC-CCCcEEEEecCCceEEEeeccCCCeEEEEec
Confidence            4667799999999999999965551  112222  2899999999999 79999999999999999999 5557778776


Q ss_pred             eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          83 VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        83 ~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                        +|...|+++  +|.++++++|+.|++|+||++++++++..+..|...|++++|++++++|++++.|+.|++||+.++.
T Consensus       244 --gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~  321 (456)
T KOG0266|consen  244 --GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGS  321 (456)
T ss_pred             --CCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCc
Confidence              778877665  6889999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             --eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC---e
Q psy8152         161 --NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA---L  235 (444)
Q Consensus       161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~---i  235 (444)
                        ++..+..+..               .. ++++++|+|++.+|++++.|+.+++|+++   ....+..+.+|...   +
T Consensus       322 ~~~~~~~~~~~~---------------~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~---~~~~~~~~~~~~~~~~~~  382 (456)
T KOG0266|consen  322 KLCLKLLSGAEN---------------SA-PVTSVQFSPNGKYLLSASLDRTLKLWDLR---SGKSVGTYTGHSNLVRCI  382 (456)
T ss_pred             eeeeecccCCCC---------------CC-ceeEEEECCCCcEEEEecCCCeEEEEEcc---CCcceeeecccCCcceeE
Confidence              4566665555               11 58999999999999999999999999999   88888888888764   3


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEEE--CCCcEEEEEcC
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSVS--LDRHFRVHDFH  305 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~  305 (444)
                      .+..+++.+.++++|+.|+.|++|++.+ +..+..+.+| ...+..+.++|..+++++++  .|+.|++|...
T Consensus       383 ~~~~~~~~~~~i~sg~~d~~v~~~~~~s-~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  383 FSPTLSTGGKLIYSGSEDGSVYVWDSSS-GGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             ecccccCCCCeEEEEeCCceEEEEeCCc-cchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            4445577899999999999999999999 9999999999 88999999999999999998  78999999754

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=2.1e-34  Score=257.42  Aligned_cols=268  Identities=18%  Similarity=0.269  Sum_probs=233.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++..|++++.+|.|++|++.+++.    ...+.  .|...+.++.|+ +++++|++++.++.|++|++.+++....+.  
T Consensus        20 ~~~~l~~~~~~g~i~i~~~~~~~~----~~~~~--~~~~~i~~~~~~-~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~--   90 (289)
T cd00200          20 DGKLLATGSGDGTIKVWDLETGEL----LRTLK--GHTGPVRDVAAS-ADGTYLASGSSDKTIRLWDLETGECVRTLT--   90 (289)
T ss_pred             CCCEEEEeecCcEEEEEEeeCCCc----EEEEe--cCCcceeEEEEC-CCCCEEEEEcCCCeEEEEEcCcccceEEEe--
Confidence            458899999999999999987763    12222  688899999999 788899999999999999999877776665  


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      .|...+.++  ++++.++++++.++.|++|++.+++....+..|...|.+++|+|++.++++++.++.|++||++.++.+
T Consensus        91 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~  170 (289)
T cd00200          91 GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCV  170 (289)
T ss_pred             ccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccc
Confidence            556566665  556678888888999999999988777667778999999999999889998888999999999988888


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      ..+..+..                  .|.+++|+|+++.|++++.++.|++||++   ....+..+..|...+.+++|+|
T Consensus       171 ~~~~~~~~------------------~i~~~~~~~~~~~l~~~~~~~~i~i~d~~---~~~~~~~~~~~~~~i~~~~~~~  229 (289)
T cd00200         171 ATLTGHTG------------------EVNSVAFSPDGEKLLSSSSDGTIKLWDLS---TGKCLGTLRGHENGVNSVAFSP  229 (289)
T ss_pred             eeEecCcc------------------ccceEEECCCcCEEEEecCCCcEEEEECC---CCceecchhhcCCceEEEEEcC
Confidence            87776665                  69999999999899999999999999999   6777777778888999999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      ++.++++++.+|.|++|++.+ ++++..+..|...|.+++|+|++++|++++.|+.|++|+
T Consensus       230 ~~~~~~~~~~~~~i~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         230 DGYLLASGSEDGTIRVWDLRT-GECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             CCcEEEEEcCCCcEEEEEcCC-ceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            988998888899999999998 899999999999999999999999999999999999996

>KOG0645|consensus

Probab=100.00  E-value=2.4e-34  Score=231.36  Aligned_cols=270  Identities=12%  Similarity=0.097  Sum_probs=219.5

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +..|++++.|..|++|+...+..  -....+..-+|+..|++++|+ |.+++|++||.|.++.||.-..+++...-.+.+
T Consensus        27 g~ilAscg~Dk~vriw~~~~~~s--~~ck~vld~~hkrsVRsvAws-p~g~~La~aSFD~t~~Iw~k~~~efecv~~lEG  103 (312)
T KOG0645|consen   27 GVILASCGTDKAVRIWSTSSGDS--WTCKTVLDDGHKRSVRSVAWS-PHGRYLASASFDATVVIWKKEDGEFECVATLEG  103 (312)
T ss_pred             ceEEEeecCCceEEEEecCCCCc--EEEEEeccccchheeeeeeec-CCCcEEEEeeccceEEEeecCCCceeEEeeeec
Confidence            45899999999999999885332  112222222899999999999 799999999999999999887666555555567


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC---CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC--
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE---PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT--  158 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~--  158 (444)
                      |...|.++  +++|++||+++.|..|-||.+...   .+...+..|...|..+.|+|...+|++++.|++|++|.-..  
T Consensus       104 HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dd  183 (312)
T KOG0645|consen  104 HENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDD  183 (312)
T ss_pred             cccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCC
Confidence            87777665  678999999999999999998744   45557888999999999999999999999999999998773  


Q ss_pred             -ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         159 -TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                       -.+++++.+|..                  .|.+++|+|.|..|++++.|++++||...   ...+    ..|..++..
T Consensus       184 dW~c~~tl~g~~~------------------TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~---~~~~----~~~sr~~Y~  238 (312)
T KOG0645|consen  184 DWECVQTLDGHEN------------------TVWSLAFDNIGSRLVSCSDDGTVSIWRLY---TDLS----GMHSRALYD  238 (312)
T ss_pred             CeeEEEEecCccc------------------eEEEEEecCCCceEEEecCCcceEeeeec---cCcc----hhcccceEe
Confidence             457888888877                  79999999999999999999999999966   2211    236678899


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCC-CC----ccee-EeccccCceeEEEecCC-CCEEEEEECCCcEEEEEcC
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRG-KG----KPCY-KYKGFAGCVKDIACPLN-ENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~-~~----~~~~-~~~~h~~~i~~~~~s~~-~~~l~s~~~dg~i~vw~~~  305 (444)
                      ++|.  ...|++++.|+.|+||.-.. +.    +++. .-..|...|++++|+|. .++|++++.||.|++|.+.
T Consensus       239 v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  239 VPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             eeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            9998  44899999999999997654 11    1222 22368889999999995 5799999999999999874

>KOG0292|consensus

Probab=100.00  E-value=2.7e-35  Score=271.74  Aligned_cols=287  Identities=15%  Similarity=0.213  Sum_probs=249.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .....|..++|+ |...+++++-..|.|++||..-+.++..|.  .|.++|.+  |+|...++++|+.|-.|+||++++.
T Consensus         7 skSsRvKglsFH-P~rPwILtslHsG~IQlWDYRM~tli~rFd--eHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r   83 (1202)
T KOG0292|consen    7 SKSSRVKGLSFH-PKRPWILTSLHSGVIQLWDYRMGTLIDRFD--EHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR   83 (1202)
T ss_pred             cccccccceecC-CCCCEEEEeecCceeeeehhhhhhHHhhhh--ccCCccceeeecCCCCeEEecCCccEEEEEecccc
Confidence            346789999999 799999999999999999999999999997  67777765  4788899999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +++.++.+|-..|..+.|++.-.+|+++|.|.+|+||+..+++++..+.+|.+                  .|.|.+|+|
T Consensus        84 rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnH------------------YVMcAqFhp  145 (1202)
T KOG0292|consen   84 RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNH------------------YVMCAQFHP  145 (1202)
T ss_pred             eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCce------------------EEEeeccCC
Confidence            99999999999999999999999999999999999999999999999999999                  899999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCC-------CC-------------------CccceEEEeCCCCCeeEEEEccCCCEEEEEc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKI-------TT-------------------QRRPVLKVDIPDVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~-------~~-------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  251 (444)
                      ....++++|-|.+||+||+..       ..                   .....+.+.+|...|+-++|+|.-.+|++|+
T Consensus       146 tEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~  225 (1202)
T KOG0292|consen  146 TEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGA  225 (1202)
T ss_pred             ccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecC
Confidence            999999999999999999862       00                   0011234678999999999999999999999


Q ss_pred             CCCcEEEEEcCCCCc--ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCC
Q psy8152         252 TTGDMMAVDLRGKGK--PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDF  328 (444)
Q Consensus       252 ~dg~i~iwd~~~~~~--~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~  328 (444)
                      .|..|++|.+.. .+  .+-+..+|.++|.++.|+|...+++|.|.|++|+|||+.....+.++. ...+.+.++.+|..
T Consensus       226 DDRqVKlWrmne-tKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~l  304 (1202)
T KOG0292|consen  226 DDRQVKLWRMNE-TKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPEL  304 (1202)
T ss_pred             CcceeeEEEecc-ccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCc
Confidence            999999999875 33  345667999999999999999999999999999999999999998886 56778899888653


Q ss_pred             cccccchhhhhccccccCCCccccCCCccc
Q psy8152         329 SLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                               .+ ..++.|+.+.++.+....
T Consensus       305 ---------NL-fAAgHDsGm~VFkleREr  324 (1202)
T KOG0292|consen  305 ---------NL-FAAGHDSGMIVFKLERER  324 (1202)
T ss_pred             ---------ce-eeeecCCceEEEEEcccC
Confidence                     33 335566666677666433

>KOG0296|consensus

Probab=100.00  E-value=1.2e-34  Score=242.41  Aligned_cols=292  Identities=14%  Similarity=0.190  Sum_probs=253.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .|+.+|.+++.+ |+.++++||+.|..-.||++.++.....+  .+|...|+++  +.+|.+||+|..+|.|+||...++
T Consensus        62 ~H~~svFavsl~-P~~~l~aTGGgDD~AflW~~~~ge~~~el--tgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg  138 (399)
T KOG0296|consen   62 KHTDSVFAVSLH-PNNNLVATGGGDDLAFLWDISTGEFAGEL--TGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTG  138 (399)
T ss_pred             hcCCceEEEEeC-CCCceEEecCCCceEEEEEccCCcceeEe--cCCCCceEEEEEccCceEEEecCCCccEEEEEcccC
Confidence            899999999999 69999999999999999999999966655  4788777665  678999999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      ...+.+..--..|.-+.|+|.+.+|+.|+.||.+.+|.+.++...+.+.+|..                  ++++=.|.|
T Consensus       139 ~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~------------------~ct~G~f~p  200 (399)
T KOG0296|consen  139 GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNS------------------PCTCGEFIP  200 (399)
T ss_pred             ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCC------------------CcccccccC
Confidence            88877776677889999999999999999999999999999888888888887                  899999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec----
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK----  272 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----  272 (444)
                      +|++++++..||+|++|++.   ++.+++.+... ....+++.++..+..++.|+.++.+++-+..+ ++.+..+.    
T Consensus       201 dGKr~~tgy~dgti~~Wn~k---tg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~s-gKVv~~~n~~~~  276 (399)
T KOG0296|consen  201 DGKRILTGYDDGTIIVWNPK---TGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGS-GKVVNCNNGTVP  276 (399)
T ss_pred             CCceEEEEecCceEEEEecC---CCceeEEecccccCcCCccccccccceeEeccCCccEEEEcccc-ceEEEecCCCCc
Confidence            99999999999999999999   88888887643 34578899999999999999999999999888 87776665    


Q ss_pred             ----cccCceeEEE---ecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcccccc
Q psy8152         273 ----GFAGCVKDIA---CPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEK  345 (444)
Q Consensus       273 ----~h~~~i~~~~---~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~  345 (444)
                          .+...+.++.   |+..-++.|+|+.||+|.|||+...++.....|...|..+.|.+.          .++++++.
T Consensus       277 ~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~t----------~~l~t~c~  346 (399)
T KOG0296|consen  277 ELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLNT----------DYLLTACA  346 (399)
T ss_pred             cccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcCc----------chheeecc
Confidence                3444444554   444557899999999999999999999888889999999999863          68999999


Q ss_pred             CCCccccCCCccccccccccc
Q psy8152         346 GDSDEKYDPEHFEMNQVTREN  366 (444)
Q Consensus       346 d~~i~~W~~~~~~~~~~~~~~  366 (444)
                      +|.|++||...+++....++.
T Consensus       347 ~g~v~~wDaRtG~l~~~y~GH  367 (399)
T KOG0296|consen  347 NGKVRQWDARTGQLKFTYTGH  367 (399)
T ss_pred             CceEEeeeccccceEEEEecC
Confidence            999999999998887655443

>KOG0293|consensus

Probab=100.00  E-value=6.8e-35  Score=247.45  Aligned_cols=275  Identities=10%  Similarity=0.054  Sum_probs=229.0

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +.++.+||+++.|.+..+|.+.....    +.....+ +|..+|..+.|| |+.++|++|+.+..+.+||+.+|.+...+
T Consensus       233 S~nGkyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~yi~wS-PDdryLlaCg~~e~~~lwDv~tgd~~~~y  307 (519)
T KOG0293|consen  233 SHNGKYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVSYIMWS-PDDRYLLACGFDEVLSLWDVDTGDLRHLY  307 (519)
T ss_pred             cCCCeeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceEEEEEC-CCCCeEEecCchHheeeccCCcchhhhhc
Confidence            45789999999999999999866553    3333333 999999999999 79999999999999999999999999887


Q ss_pred             eec-cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152          82 DVS-FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN-VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        82 ~~~-~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      ... +......++.|+|..+++|+.|+++..|++.....- ...+ ....|.+++..++|+++++.+.|..|++++..+.
T Consensus       308 ~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~-~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~  386 (519)
T KOG0293|consen  308 PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILG-NWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREAR  386 (519)
T ss_pred             ccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhh-cccccccceeEEEEEcCCCcEEEEEecccceeeechhhh
Confidence            632 223444667899999999999999999998754432 2333 2356999999999999999999999999999875


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC--eeE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA--LSC  237 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~--i~~  237 (444)
                      ........+.                   +|++++.+.+++++++.-.+..+++||+.   ..+.+..+.+|...  +-.
T Consensus       387 ~dr~lise~~-------------------~its~~iS~d~k~~LvnL~~qei~LWDl~---e~~lv~kY~Ghkq~~fiIr  444 (519)
T KOG0293|consen  387 VDRGLISEEQ-------------------PITSFSISKDGKLALVNLQDQEIHLWDLE---ENKLVRKYFGHKQGHFIIR  444 (519)
T ss_pred             hhhccccccC-------------------ceeEEEEcCCCcEEEEEcccCeeEEeecc---hhhHHHHhhcccccceEEE
Confidence            5443333333                   49999999999999999999999999999   88888888888653  333


Q ss_pred             EEEcc-CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCC
Q psy8152         238 ITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       238 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~  306 (444)
                      -+|.- +..++++|+.|+.|+||+..+ ++++..+.||...|++++|+|.. .++|+||.||+||||....
T Consensus       445 SCFgg~~~~fiaSGSED~kvyIWhr~s-gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  445 SCFGGGNDKFIASGSEDSKVYIWHRIS-GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             eccCCCCcceEEecCCCceEEEEEccC-CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            34543 457999999999999999999 99999999999999999999976 5899999999999998764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.2e-33  Score=284.89  Aligned_cols=278  Identities=13%  Similarity=0.189  Sum_probs=224.2

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeee-eeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNI-QNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      .++.+|++|+.|+.|+||++.......... .....+.+...|.+++|+|+.+.+|++++.||+|+|||+.+++.+..+.
T Consensus       493 ~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~  572 (793)
T PLN00181        493 RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMK  572 (793)
T ss_pred             CCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            356889999999999999975421100000 0111124467899999996668899999999999999999888877765


Q ss_pred             eccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC
Q psy8152          83 VSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        83 ~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~  158 (444)
                        +|...|.++  +| ++.+|++|+.|++|++||+.++..+..+. +...|.++.|++ ++.+|++|+.||.|++||+++
T Consensus       573 --~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~  649 (793)
T PLN00181        573 --EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANICCVQFPSESGRSLAFGSADHKVYYYDLRN  649 (793)
T ss_pred             --CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe-cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence              677888776  44 57899999999999999999888776443 456899999965 799999999999999999987


Q ss_pred             ce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC---CCccceEEEeCCCCC
Q psy8152         159 TK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT---TQRRPVLKVDIPDVA  234 (444)
Q Consensus       159 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~  234 (444)
                      .+ ++..+.+|..                  .|.++.|. ++.+|++++.|++|++||++..   ....++..+.+|...
T Consensus       650 ~~~~~~~~~~h~~------------------~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~  710 (793)
T PLN00181        650 PKLPLCTMIGHSK------------------TVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNV  710 (793)
T ss_pred             CCccceEecCCCC------------------CEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCC
Confidence            65 4566666666                  79999997 6789999999999999999721   123577889999999


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe-------------ccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY-------------KGFAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                      +.+++|+|++.+|++|+.|+.|++|+... ..++..+             ..|...|.+++|+|++.+|++|+.+|.|+|
T Consensus       711 i~~v~~s~~~~~lasgs~D~~v~iw~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i  789 (793)
T PLN00181        711 KNFVGLSVSDGYIATGSETNEVFVYHKAF-PMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKI  789 (793)
T ss_pred             eeEEEEcCCCCEEEEEeCCCEEEEEECCC-CCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEE
Confidence            99999999999999999999999999876 4444322             234567999999999999999999999999


Q ss_pred             EEc
Q psy8152         302 HDF  304 (444)
Q Consensus       302 w~~  304 (444)
                      |++
T Consensus       790 ~~~  792 (793)
T PLN00181        790 LEM  792 (793)
T ss_pred             Eec
Confidence            986

>KOG0275|consensus

Probab=100.00  E-value=3.5e-35  Score=242.10  Aligned_cols=282  Identities=13%  Similarity=0.197  Sum_probs=244.3

Q ss_pred             cCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec------cccccEEEE--EeCCCeEEEEecCCcEE
Q psy8152          39 ITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS------FGEGDIVGV--SRYDECILTAVKSGDVK  110 (444)
Q Consensus        39 ~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~------~~~~~v~~~--s~~~~~l~~~~~dg~i~  110 (444)
                      ++..+-+-|..|+ |++++|++|+.||.|.+|+..+|+..+-++..      .+..+|.|+  +.+..+|++|+.||.|+
T Consensus       210 Fg~KSh~EcA~FS-PDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIK  288 (508)
T KOG0275|consen  210 FGQKSHVECARFS-PDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIK  288 (508)
T ss_pred             cccccchhheeeC-CCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEE
Confidence            3677889999999 89999999999999999999999887765433      235666665  56788999999999999


Q ss_pred             EEEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         111 LWRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       111 iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      +|.+.+|+|++.+. .|...|+|+.|+.++..+++++.|.++++.-+..|+++..+++|..                  .
T Consensus       289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS------------------y  350 (508)
T KOG0275|consen  289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS------------------Y  350 (508)
T ss_pred             EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc------------------c
Confidence            99999999998665 6999999999999999999999999999999999999999999998                  8


Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCc
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGK  266 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~  266 (444)
                      |+.+.|.++|.++++++.||+|++|+.+   +..++.+|+  +...+|.++..-|. ...++++...++|+|.++.  ++
T Consensus       351 vn~a~ft~dG~~iisaSsDgtvkvW~~K---tteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q--GQ  425 (508)
T KOG0275|consen  351 VNEATFTDDGHHIISASSDGTVKVWHGK---TTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ--GQ  425 (508)
T ss_pred             ccceEEcCCCCeEEEecCCccEEEecCc---chhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc--ce
Confidence            9999999999999999999999999999   666666665  34567888887774 5678889999999999987  78


Q ss_pred             ceeEecc---ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccc
Q psy8152         267 PCYKYKG---FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHS  342 (444)
Q Consensus       267 ~~~~~~~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s  342 (444)
                      .+++|..   ..+...+++.+|.|.++++.+.|+.++.|.+.+|++..++. |...+-.++-.|         -...+++
T Consensus       426 vVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHP---------HqNllAs  496 (508)
T KOG0275|consen  426 VVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHP---------HQNLLAS  496 (508)
T ss_pred             EEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCc---------ccchhhh
Confidence            8888873   24556677899999999999999999999999999988876 666666776554         4578999


Q ss_pred             cccCCCccccC
Q psy8152         343 EEKGDSDEKYD  353 (444)
Q Consensus       343 ~~~d~~i~~W~  353 (444)
                      -++||.+++|.
T Consensus       497 YsEDgllKLWk  507 (508)
T KOG0275|consen  497 YSEDGLLKLWK  507 (508)
T ss_pred             hcccchhhhcC
Confidence            99999999996

>KOG1407|consensus

Probab=100.00  E-value=4.4e-34  Score=228.66  Aligned_cols=263  Identities=13%  Similarity=0.155  Sum_probs=236.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE---eCCCeEEEEecCCcEEEEEcCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS---RYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s---~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      +|...|.+++|+ .++..|++|+.|+++.+|++...+........+|...|-.+.   ++..+|++++.+.+|++||++.
T Consensus        18 ~~~~~v~Sv~wn-~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~   96 (313)
T KOG1407|consen   18 GHVQKVHSVAWN-CDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS   96 (313)
T ss_pred             hhhhcceEEEEc-ccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence            899999999999 899999999999999999999888888877778887775553   3577899999999999999999


Q ss_pred             CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      +++.. .......-..+.|+|++.+++.++.|..|.+.|.++.+.+...+...                   .+..++|+
T Consensus        97 ~k~~~-~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~-------------------e~ne~~w~  156 (313)
T KOG1407|consen   97 GKCTA-RIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKF-------------------EVNEISWN  156 (313)
T ss_pred             CcEEE-EeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccc-------------------eeeeeeec
Confidence            99986 44444455668999999999999999999999999877776554433                   38889999


Q ss_pred             cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      -++.+++.....|+|.|....   ..+++.+++.|.....||.|+|+|++||+|+.|-.+.+||+.. .-+++.+..+.-
T Consensus       157 ~~nd~Fflt~GlG~v~ILsyp---sLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E-LiC~R~isRldw  232 (313)
T KOG1407|consen  157 NSNDLFFLTNGLGCVEILSYP---SLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE-LICERCISRLDW  232 (313)
T ss_pred             CCCCEEEEecCCceEEEEecc---ccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH-hhhheeeccccC
Confidence            777888888888999999998   9999999999999999999999999999999999999999998 888999999999


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      +|..+.||.+|++||+|+.|..|-|=++.+|..+..+.+.++...++|+|.
T Consensus       233 pVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk  283 (313)
T KOG1407|consen  233 PVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPK  283 (313)
T ss_pred             ceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCC
Confidence            999999999999999999999999999999999999999999999999875

>KOG0313|consensus

Probab=100.00  E-value=5.4e-34  Score=239.61  Aligned_cols=281  Identities=14%  Similarity=0.164  Sum_probs=230.9

Q ss_pred             ecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE---eC--CCeEEEEecCCcEE
Q psy8152          36 VKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS---RY--DECILTAVKSGDVK  110 (444)
Q Consensus        36 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s---~~--~~~l~~~~~dg~i~  110 (444)
                      +..+.|...|.++...   +..+++|+.||.+++|+.. |+....+.  +|.+++.++.   ++  ...|++++.|.+++
T Consensus        99 l~~~~hdDWVSsv~~~---~~~IltgsYDg~~riWd~~-Gk~~~~~~--Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~  172 (423)
T KOG0313|consen   99 LQCFLHDDWVSSVKGA---SKWILTGSYDGTSRIWDLK-GKSIKTIV--GHTGPIKSVAWVIKNSSSCLFVSASMDQTLR  172 (423)
T ss_pred             cccccchhhhhhhccc---CceEEEeecCCeeEEEecC-CceEEEEe--cCCcceeeeEEEecCCccceEEEecCCceEE
Confidence            3344788999999876   7899999999999999986 77777665  8888887653   22  34699999999999


Q ss_pred             EEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-------------------------cee
Q psy8152         111 LWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-------------------------TKN  161 (444)
Q Consensus       111 iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-------------------------~~~  161 (444)
                      +|.++.+....    ...+|...|-++...+++..+++|+.|..|.||+..+                         +.+
T Consensus       173 Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P  252 (423)
T KOG0313|consen  173 LWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTP  252 (423)
T ss_pred             EEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCc
Confidence            99988765432    3448999999999999999999999999999999322                         113


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +.++.+|..                  +|.++.|++ ...+++++.|.+|+.||+.   ....+.++.+ ...+.++.++
T Consensus       253 ~vtl~GHt~------------------~Vs~V~w~d-~~v~yS~SwDHTIk~WDle---tg~~~~~~~~-~ksl~~i~~~  309 (423)
T KOG0313|consen  253 LVTLEGHTE------------------PVSSVVWSD-ATVIYSVSWDHTIKVWDLE---TGGLKSTLTT-NKSLNCISYS  309 (423)
T ss_pred             eEEeccccc------------------ceeeEEEcC-CCceEeecccceEEEEEee---cccceeeeec-CcceeEeecc
Confidence            333444444                  899999988 6789999999999999999   7777776654 4568999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCC--cceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCc-eEEEee-cC
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKG--KPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKK-LLRKDY-MQ  316 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~-~~~~~~-~~  316 (444)
                      |..++|++|+.|..|++||.+++.  -+.++|.+|++.|.++.|+|.. ..|++++.|+++++||+++.+ ++..+. |.
T Consensus       310 ~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~  389 (423)
T KOG0313|consen  310 PLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHN  389 (423)
T ss_pred             cccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCC
Confidence            999999999999999999999832  3456788999999999999976 578999999999999999976 777775 88


Q ss_pred             CceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         317 SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       317 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .+|.++.|...          ..++||+.|.+++++...
T Consensus       390 DKvl~vdW~~~----------~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  390 DKVLSVDWNEG----------GLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             ceEEEEeccCC----------ceEEeccCcceEEEeccc
Confidence            88888887543          689999999999998643

>KOG1446|consensus

Probab=100.00  E-value=6.6e-33  Score=228.43  Aligned_cols=281  Identities=10%  Similarity=0.154  Sum_probs=236.9

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCC
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEP  118 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~  118 (444)
                      -...|++|.|+ ++|.+|++++.|.+|+|||..+++.++++..+.....+.+|......++.++.  |.+|+..++.+.+
T Consensus        13 ~~~~i~sl~fs-~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNk   91 (311)
T KOG1446|consen   13 TNGKINSLDFS-DDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNK   91 (311)
T ss_pred             CCCceeEEEec-CCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCc
Confidence            47899999999 89999999999999999999999999998766656677777666666665665  8899999999999


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      .++.+.+|...|+.++.+|-+..+++++.|++|++||++..++...+.....                    ..++|.|.
T Consensus        92 ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--------------------pi~AfDp~  151 (311)
T KOG1446|consen   92 YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--------------------PIAAFDPE  151 (311)
T ss_pred             eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--------------------cceeECCC
Confidence            9998999999999999999889999999999999999998777665544333                    35789999


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEEEeCC---CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP---DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      |-++|++.....|++||+| .....|..++...   ....+.|.|||+|++|+.++..+.+++.|.-. |..+.++..+.
T Consensus       152 GLifA~~~~~~~IkLyD~R-s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~-G~~~~tfs~~~  229 (311)
T KOG1446|consen  152 GLIFALANGSELIKLYDLR-SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFD-GTVKSTFSGYP  229 (311)
T ss_pred             CcEEEEecCCCeEEEEEec-ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccC-CcEeeeEeecc
Confidence            9999999888899999999 5555666666544   56789999999999999999999999999999 99999998765


Q ss_pred             Cce---eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee--cCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         276 GCV---KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       276 ~~i---~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                      ..-   ....|+|+++++++|+.||+|.+|++.+++.+.++.  +.+++.++.|+|.+         .+.+|  .+..+.
T Consensus       230 ~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~---------~mf~s--a~s~l~  298 (311)
T KOG1446|consen  230 NAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRY---------AMFVS--ASSNLV  298 (311)
T ss_pred             CCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCce---------eeeee--cCceEE
Confidence            432   567899999999999999999999999999988876  57788888887664         34444  455688


Q ss_pred             ccCCC
Q psy8152         351 KYDPE  355 (444)
Q Consensus       351 ~W~~~  355 (444)
                      +|-..
T Consensus       299 fw~p~  303 (311)
T KOG1446|consen  299 FWLPD  303 (311)
T ss_pred             EEecc
Confidence            88655

>KOG1407|consensus

Probab=100.00  E-value=1.5e-33  Score=225.65  Aligned_cols=273  Identities=14%  Similarity=0.122  Sum_probs=239.8

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .++..|++|+.++++.+|++...+.    ......-+|.+.|-.++|+|+..++|++++.|.+|++||+..+++...+..
T Consensus        30 ~~g~~lasgs~dktv~v~n~e~~r~----~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~  105 (313)
T KOG1407|consen   30 CDGTKLASGSFDKTVSVWNLERDRF----RKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIET  105 (313)
T ss_pred             ccCceeeecccCCceEEEEecchhh----hhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeec
Confidence            4678999999999999999987753    122222389999999999999999999999999999999999999988764


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      .+ ......++|+|.++++++.|..|.+.|.++.+... .......+..++|+.++.+++.....|+|.|.....-+++.
T Consensus       106 ~~-eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~-~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~  183 (313)
T KOG1407|consen  106 KG-ENINITWSPDGEYIAVGNKDDRITFIDARTYKIVN-EEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQ  183 (313)
T ss_pred             cC-cceEEEEcCCCCEEEEecCcccEEEEEecccceee-hhcccceeeeeeecCCCCEEEEecCCceEEEEecccccccc
Confidence            33 45556789999999999999999999999888774 55667778899999877777777777999999999999999


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      .++.|..                  ...||.|+|+|++||+|+.|..+.+||+.   ...+++.+..+..+|..+.|+.+
T Consensus       184 si~AH~s------------------nCicI~f~p~GryfA~GsADAlvSLWD~~---ELiC~R~isRldwpVRTlSFS~d  242 (313)
T KOG1407|consen  184 SIKAHPS------------------NCICIEFDPDGRYFATGSADALVSLWDVD---ELICERCISRLDWPVRTLSFSHD  242 (313)
T ss_pred             ccccCCc------------------ceEEEEECCCCceEeeccccceeeccChh---HhhhheeeccccCceEEEEeccC
Confidence            9998887                  79999999999999999999999999999   89999999999999999999999


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC---------CcEEEEEcC
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD---------RHFRVHDFH  305 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d---------g~i~vw~~~  305 (444)
                      |++||+|+.|..|-|=++.+ |..+..++ +.++...++|+|...+||-++.|         |.|++|-+.
T Consensus       243 g~~lASaSEDh~IDIA~vet-Gd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~  311 (313)
T KOG1407|consen  243 GRMLASASEDHFIDIAEVET-GDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS  311 (313)
T ss_pred             cceeeccCccceEEeEeccc-CCeEEEee-ccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence            99999999999999999999 99999998 78899999999999999988765         456666543

>KOG0274|consensus

Probab=100.00  E-value=6.7e-34  Score=265.83  Aligned_cols=271  Identities=15%  Similarity=0.223  Sum_probs=244.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ..++++++.+++|++|+...+.....+     ..+|.+.|++++|. ..+.+|++|+.|.++++||..++++...+.  +
T Consensus       218 ~~~~~~~s~~~tl~~~~~~~~~~i~~~-----l~GH~g~V~~l~~~-~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~--g  289 (537)
T KOG0274|consen  218 DGFFKSGSDDSTLHLWDLNNGYLILTR-----LVGHFGGVWGLAFP-SGGDKLVSGSTDKTERVWDCSTGECTHSLQ--G  289 (537)
T ss_pred             cCeEEecCCCceeEEeecccceEEEee-----ccCCCCCceeEEEe-cCCCEEEEEecCCcEEeEecCCCcEEEEec--C
Confidence            568899999999999999888742111     22999999999998 578999999999999999999999999986  8


Q ss_pred             ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee
Q psy8152          86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA  165 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~  165 (444)
                      |...+.++.-.+.++++|+.|.+|++|++.++.++..+.+|..+|.++..+  +.++++|+.|++|++|++.+++++.++
T Consensus       290 h~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl  367 (537)
T KOG0274|consen  290 HTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSL  367 (537)
T ss_pred             CCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeee
Confidence            899999999999999999999999999999999998666799999999996  889999999999999999999999999


Q ss_pred             ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCC
Q psy8152         166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      .+|..                  +|+++.+.+. .++++|+.|++|++||++   .. ++++++.+|...+..+.+  .+
T Consensus       368 ~gH~~------------------~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~---~~~~c~~tl~~h~~~v~~l~~--~~  423 (537)
T KOG0274|consen  368 SGHTG------------------RVYSLIVDSE-NRLLSGSLDTTIKVWDLR---TKRKCIHTLQGHTSLVSSLLL--RD  423 (537)
T ss_pred             cCCcc------------------eEEEEEecCc-ceEEeeeeccceEeecCC---chhhhhhhhcCCccccccccc--cc
Confidence            99988                  8999988655 899999999999999999   66 899999999988877665  57


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      ++|++++.|++|++||... +++++++.+ |...|+.+++.  ...+++++.+|++++||++++++...+
T Consensus       424 ~~Lvs~~aD~~Ik~WD~~~-~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  424 NFLVSSSADGTIKLWDAEE-GECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             ceeEeccccccEEEeeccc-CceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence            8999999999999999999 999999998 77889988876  467999999999999999999988765

>KOG0275|consensus

Probab=100.00  E-value=5e-35  Score=241.16  Aligned_cols=278  Identities=16%  Similarity=0.166  Sum_probs=243.1

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCcccee-eeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIK-NIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~-~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      ++++++|++|+.||.|.+|++.+++.... .++.-..+ -|..+|.|+.|+ .+...|++|+.||.|+||.+.+|.+++.
T Consensus       222 SPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FS-RDsEMlAsGsqDGkIKvWri~tG~ClRr  300 (508)
T KOG0275|consen  222 SPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFS-RDSEMLASGSQDGKIKVWRIETGQCLRR  300 (508)
T ss_pred             CCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeec-ccHHHhhccCcCCcEEEEEEecchHHHH
Confidence            46789999999999999999998875210 11111112 578999999999 6999999999999999999999999999


Q ss_pred             eeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152          81 TDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        81 ~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~  158 (444)
                      |. ..|...|+++  +.++..+++++.|.++++.-+++|+++..+.+|...|+...|.++|..+++++.||+|++|+..+
T Consensus       301 Fd-rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Kt  379 (508)
T KOG0275|consen  301 FD-RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKT  379 (508)
T ss_pred             hh-hhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcc
Confidence            87 4677777665  56889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCC---CCC
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP---DVA  234 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~  234 (444)
                      ..++.+++....                ..+|+++..-|.. ..+++|...++|+|.++.    ++.+.++...   .+.
T Consensus       380 teC~~Tfk~~~~----------------d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q----GQvVrsfsSGkREgGd  439 (508)
T KOG0275|consen  380 TECLSTFKPLGT----------------DYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ----GQVVRSFSSGKREGGD  439 (508)
T ss_pred             hhhhhhccCCCC----------------cccceeEEEcCCCCceEEEEcCCCeEEEEecc----ceEEeeeccCCccCCc
Confidence            999988876654                3468888888876 789999999999999987    7777777643   345


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      ..+.+++|.|.++++.+.|+.++.|...+ +++-+++..|...|..++-+|..++||+-+.||.+++|.
T Consensus       440 Fi~~~lSpkGewiYcigED~vlYCF~~~s-G~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  440 FINAILSPKGEWIYCIGEDGVLYCFSVLS-GKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             eEEEEecCCCcEEEEEccCcEEEEEEeec-CceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            66778999999999999999999999999 999999999999999999999999999999999999995

>KOG0277|consensus

Probab=100.00  E-value=4e-34  Score=228.02  Aligned_cols=264  Identities=14%  Similarity=0.190  Sum_probs=223.9

Q ss_pred             CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEE
Q psy8152          14 STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVG   92 (444)
Q Consensus        14 ~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~   92 (444)
                      ..|.|.|.++...+.    ++....+.-...+..++|++...+.+++++.||+++|||+.. ...+..++  .|...|.+
T Consensus        36 G~G~L~ile~~~~~g----i~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~k--EH~~EV~S  109 (311)
T KOG0277|consen   36 GNGRLFILEVTDPKG----IQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFK--EHKREVYS  109 (311)
T ss_pred             cCceEEEEecCCCCC----eEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHH--hhhhheEE
Confidence            468899999864433    345554456889999999977778999999999999999643 33455554  88999999


Q ss_pred             EEe---CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC-ceeeeeeec
Q psy8152          93 VSR---YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT-TKNIFSAKN  167 (444)
Q Consensus        93 ~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~  167 (444)
                      +.+   ....+++++.|++|++|+...++.+.++.+|...|...+|+| .++++++++.|+++++||++. ++.+. +..
T Consensus       110 vdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~a  188 (311)
T KOG0277|consen  110 VDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEA  188 (311)
T ss_pred             eccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEe
Confidence            864   356688889999999999999999989999999999999999 899999999999999999987 44444 777


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CC
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SH  245 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~  245 (444)
                      |..                  .|.++.|+.-. +.|++|+.|+.|+.||++  ..+.++..+.+|...|..++|||. ..
T Consensus       189 h~~------------------Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir--~~r~pl~eL~gh~~AVRkvk~Sph~~~  248 (311)
T KOG0277|consen  189 HNS------------------EILCCDWSKYNHNVLATGGVDNLVRGWDIR--NLRTPLFELNGHGLAVRKVKFSPHHAS  248 (311)
T ss_pred             ccc------------------eeEeecccccCCcEEEecCCCceEEEEehh--hccccceeecCCceEEEEEecCcchhh
Confidence            765                  69999998755 889999999999999999  667889999999999999999996 56


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCC-CCEEEEEECCCcEEEEEc
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN-ENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~-~~~l~s~~~dg~i~vw~~  304 (444)
                      .|++++.|-+++|||...+...+.+..-|+..|..+.|++. ..++|+.+.|+.++||+.
T Consensus       249 lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  249 LLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             HhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            88999999999999998646677777789999999999984 469999999999999984

>KOG0276|consensus

Probab=100.00  E-value=4.2e-34  Score=254.63  Aligned_cols=266  Identities=14%  Similarity=0.132  Sum_probs=236.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ..-.++++-.+|.|.||+.++... .+.+.     -..-+|++..|- +..+++++|+.|..|+||+..+++.++.|.  
T Consensus        24 tePw~la~LynG~V~IWnyetqtm-Vksfe-----V~~~PvRa~kfi-aRknWiv~GsDD~~IrVfnynt~ekV~~Fe--   94 (794)
T KOG0276|consen   24 TEPWILAALYNGDVQIWNYETQTM-VKSFE-----VSEVPVRAAKFI-ARKNWIVTGSDDMQIRVFNYNTGEKVKTFE--   94 (794)
T ss_pred             CCceEEEeeecCeeEEEeccccee-eeeee-----ecccchhhheee-eccceEEEecCCceEEEEecccceeeEEee--
Confidence            345788999999999999998875 33333     236789999999 789999999999999999999999999997  


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC-CccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCce
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE-PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      .|..-|.++  +|...++++++.|-+|++|+.+.. .+.+++.+|...|.+++|+| +.+.+|+++-|++|+||.+.+..
T Consensus        95 AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~  174 (794)
T KOG0276|consen   95 AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPH  174 (794)
T ss_pred             ccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCC
Confidence            566666555  788999999999999999998865 56667889999999999999 89999999999999999999999


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      +.+++.+|..                  .|+|+.|-+.|  .+|++|+.|.+|+|||..   +..++.++.+|...|..+
T Consensus       175 ~nfTl~gHek------------------GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ---tk~CV~TLeGHt~Nvs~v  233 (794)
T KOG0276|consen  175 PNFTLEGHEK------------------GVNCVDYYTGGDKPYLISGADDLTIKVWDYQ---TKSCVQTLEGHTNNVSFV  233 (794)
T ss_pred             Cceeeecccc------------------CcceEEeccCCCcceEEecCCCceEEEeecc---hHHHHHHhhcccccceEE
Confidence            9999999988                  79999998766  699999999999999999   999999999999999999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                      .|+|.-.+|++|+.||+++||+..+ .++..++.-.-..|.+++-.+.++.++.|...|.|.+
T Consensus       234 ~fhp~lpiiisgsEDGTvriWhs~T-y~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  234 FFHPELPIIISGSEDGTVRIWNSKT-YKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV  295 (794)
T ss_pred             EecCCCcEEEEecCCccEEEecCcc-eehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence            9999999999999999999999998 8888888766778999999888888888887776643

>KOG0277|consensus

Probab=100.00  E-value=5.1e-34  Score=227.42  Aligned_cols=280  Identities=15%  Similarity=0.229  Sum_probs=224.7

Q ss_pred             EEEeeeccCCcEEEEEEc-------CCeEEEEeCCCCccccceeeccccccEEEEEe---CCCeEEEEecCCcEEEEEcC
Q psy8152          46 LALNWGNVEESELLIAYS-------GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~  115 (444)
                      .++.|||--.++|+++..       .|++.|.++...+-+..+....-...+..+.+   ..+.+++++.||.+++||+.
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~   91 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT   91 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence            678899755666665432       58999999875554444432233556666644   34678999999999999964


Q ss_pred             C-CCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         116 T-EPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       116 ~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      . ..++..+..|...|.++.|++ .+..+++++.|++|++|+...++.+.++.+|..                  .|+..
T Consensus        92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~------------------~Iy~a  153 (311)
T KOG0277|consen   92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNS------------------CIYQA  153 (311)
T ss_pred             CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCcc------------------EEEEE
Confidence            3 346667888999999999999 778889999999999999999999999999888                  79999


Q ss_pred             EEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         194 SFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       194 ~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      +|+|.. +.+++++.|+++++||++  ..++.+. +..|...|.++.|+. +.+.|++|+.|+.|++||+++...++..+
T Consensus       154 ~~sp~~~nlfas~Sgd~~l~lwdvr--~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL  230 (311)
T KOG0277|consen  154 AFSPHIPNLFASASGDGTLRLWDVR--SPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL  230 (311)
T ss_pred             ecCCCCCCeEEEccCCceEEEEEec--CCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceee
Confidence            999976 899999999999999999  2344444 889999999999987 46788999999999999999977899999


Q ss_pred             ccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceE-EEee-cCCceeEEEEcCCCcccccchhhhhccccccCCC
Q psy8152         272 KGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLL-RKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDS  348 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~  348 (444)
                      .+|.-.|+.++|||.. .+||+++.|-+++||+...+.-. .+.. |..-+..+    +|+..    ++.++++.+.|+.
T Consensus       231 ~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~----Dws~~----~~~~vAs~gWDe~  302 (311)
T KOG0277|consen  231 NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGL----DWSLF----DPGQVASTGWDEL  302 (311)
T ss_pred             cCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEecc----ccccc----cCceeeecccccc
Confidence            9999999999999976 69999999999999999864433 3333 43334444    45532    3478999999999


Q ss_pred             ccccCC
Q psy8152         349 DEKYDP  354 (444)
Q Consensus       349 i~~W~~  354 (444)
                      +.||+.
T Consensus       303 l~Vw~p  308 (311)
T KOG0277|consen  303 LYVWNP  308 (311)
T ss_pred             eeeecc
Confidence            999984

>KOG0278|consensus

Probab=100.00  E-value=1.1e-34  Score=230.70  Aligned_cols=284  Identities=12%  Similarity=0.131  Sum_probs=248.1

Q ss_pred             CcccceEEEeeec--cCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGN--VEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~--~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|..+|..++|+|  |++-+|++++.|+.-.+-+-.+|..+.+|.  +|.+.|+..+-  +-.+.++++.|-+-++||.-
T Consensus        12 ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfe--ghkgavw~~~l~~na~~aasaaadftakvw~a~   89 (334)
T KOG0278|consen   12 GHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFE--GHKGAVWSATLNKNATRAASAAADFTAKVWDAV   89 (334)
T ss_pred             CCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeee--ccCcceeeeecCchhhhhhhhcccchhhhhhhh
Confidence            8999999999997  789999999999999999999999999997  88888887654  44568889999999999999


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ++..+. .+.|..-|..++|+.+.++|++|+.+..++|||++..+ +...+.+|..                  .|+.+.
T Consensus        90 tgdelh-sf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg------------------~Ir~v~  150 (334)
T KOG0278|consen   90 TGDELH-SFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTG------------------GIRTVL  150 (334)
T ss_pred             hhhhhh-hhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCC------------------cceeEE
Confidence            998885 88899999999999999999999999999999998743 5566666666                  799999


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      |....+.|++++.|++||+||.+   +...++++. ...+|+++.++++|++|.++ ..+.|.+||..+ ..++..+.. 
T Consensus       151 wc~eD~~iLSSadd~tVRLWD~r---Tgt~v~sL~-~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaks-f~~lKs~k~-  223 (334)
T KOG0278|consen  151 WCHEDKCILSSADDKTVRLWDHR---TGTEVQSLE-FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKS-FGLLKSYKM-  223 (334)
T ss_pred             EeccCceEEeeccCCceEEEEec---cCcEEEEEe-cCCCCcceeeccCCCEEEEe-cCceeEEecccc-ccceeeccC-
Confidence            99888999999999999999999   777787776 45679999999999877665 566799999999 888888773 


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccccCCCcccc
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKY  352 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W  352 (444)
                      ...|.+..++|+...+++|+.|..++.||..++..+...  .|.++|.|+.|+|         ++...++|++||+||||
T Consensus       224 P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP---------dGE~yAsGSEDGTirlW  294 (334)
T KOG0278|consen  224 PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP---------DGELYASGSEDGTIRLW  294 (334)
T ss_pred             ccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECC---------CCceeeccCCCceEEEE
Confidence            467899999999999999999999999999999888774  3899999999985         47889999999999999


Q ss_pred             CCCccccc
Q psy8152         353 DPEHFEMN  360 (444)
Q Consensus       353 ~~~~~~~~  360 (444)
                      ....++..
T Consensus       295 Qt~~~~~~  302 (334)
T KOG0278|consen  295 QTTPGKTY  302 (334)
T ss_pred             EecCCCch
Confidence            87755443

>KOG0294|consensus

Probab=100.00  E-value=1.7e-32  Score=225.31  Aligned_cols=288  Identities=18%  Similarity=0.253  Sum_probs=233.3

Q ss_pred             ccEEEecCCCcEEEEEcCCCcc-----ceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKC-----IIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~-----~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      ..|++|++...|.-+++.....     ....+..+-.+ .|.++|++++.+   +.++|+|+.|-+|+|||+.+...+..
T Consensus         2 m~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs---~~~~aSGssDetI~IYDm~k~~qlg~   78 (362)
T KOG0294|consen    2 MEIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS---GPYVASGSSDETIHIYDMRKRKQLGI   78 (362)
T ss_pred             eeEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec---ceeEeccCCCCcEEEEeccchhhhcc
Confidence            4689999999999998855431     01112222222 899999999998   89999999999999999998888887


Q ss_pred             eeeccccccEEEEEeCC----CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          81 TDVSFGEGDIVGVSRYD----ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        81 ~~~~~~~~~v~~~s~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      +.  .|.+.|+++.+..    ..|++|+.||.|.+|+.....++..+.+|.+.|+.++.+|.+++.++.+.|+.+++||+
T Consensus        79 ll--~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL  156 (362)
T KOG0294|consen   79 LL--SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNL  156 (362)
T ss_pred             ee--ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehh
Confidence            75  6688888886543    36999999999999999999999889999999999999999999999999999999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                      .+|+..+.++....                   .+.+.|+|.|.+++.++.+ .|-+|.+.   .......+. ....+.
T Consensus       157 V~Gr~a~v~~L~~~-------------------at~v~w~~~Gd~F~v~~~~-~i~i~q~d---~A~v~~~i~-~~~r~l  212 (362)
T KOG0294|consen  157 VRGRVAFVLNLKNK-------------------ATLVSWSPQGDHFVVSGRN-KIDIYQLD---NASVFREIE-NPKRIL  212 (362)
T ss_pred             hcCccceeeccCCc-------------------ceeeEEcCCCCEEEEEecc-EEEEEecc---cHhHhhhhh-ccccce
Confidence            99887766654444                   5569999999988887776 68899988   443333333 224566


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe--cCCCCEEEEEECCCcEEEEEcCCC-----ce
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC--PLNENLILSVSLDRHFRVHDFHSK-----KL  309 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~--s~~~~~l~s~~~dg~i~vw~~~~~-----~~  309 (444)
                      ++.|. ++.+|++|..++.|.+||... ..++..+.+|...|.++.+  .|.+.+|+++|.||.|+|||+...     ++
T Consensus       213 ~~~~l-~~~~L~vG~d~~~i~~~D~ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~  290 (362)
T KOG0294|consen  213 CATFL-DGSELLVGGDNEWISLKDTDS-DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTL  290 (362)
T ss_pred             eeeec-CCceEEEecCCceEEEeccCC-CccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccCCcce
Confidence            77775 567899999999999999999 9999999999999999974  467789999999999999999875     45


Q ss_pred             EEEeecCCceeEEEEc
Q psy8152         310 LRKDYMQSRLTSILVR  325 (444)
Q Consensus       310 ~~~~~~~~~i~~~~~~  325 (444)
                      +..+....+++|+...
T Consensus       291 l~e~n~~~RltCl~~~  306 (362)
T KOG0294|consen  291 LAELNTNVRLTCLRVK  306 (362)
T ss_pred             eEEeecCCccceeeeh
Confidence            5555566677777544

>KOG0278|consensus

Probab=100.00  E-value=4.2e-34  Score=227.35  Aligned_cols=273  Identities=15%  Similarity=0.158  Sum_probs=235.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++++.||.-.+-+-.++..    +-.+.  +|+++|+..++. .+....++++.|-+-+|||.-+|..+..|. 
T Consensus        27 p~g~flisa~kd~~pmlr~g~tgdw----igtfe--ghkgavw~~~l~-~na~~aasaaadftakvw~a~tgdelhsf~-   98 (334)
T KOG0278|consen   27 PDGYFLISASKDGKPMLRNGDTGDW----IGTFE--GHKGAVWSATLN-KNATRAASAAADFTAKVWDAVTGDELHSFE-   98 (334)
T ss_pred             CCceEEEEeccCCCchhccCCCCCc----EEeee--ccCcceeeeecC-chhhhhhhhcccchhhhhhhhhhhhhhhhh-
Confidence            4568899999999887777666664    12222  999999999999 678888899999999999999999999985 


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      +.|-...++|+.+.++|++|+.+..++||+++..+... .+.+|.+.|..+.|....+.|++++.|++||+||.+++..+
T Consensus        99 hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v  178 (334)
T KOG0278|consen   99 HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEV  178 (334)
T ss_pred             hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEE
Confidence            45566667778889999999999999999998765433 56779999999999998889999999999999999999999


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      +++.....                   |+++.++++|.+|.+ ...+.|.+||..   ...++..+... ..|.+..++|
T Consensus       179 ~sL~~~s~-------------------VtSlEvs~dG~ilTi-a~gssV~Fwdak---sf~~lKs~k~P-~nV~SASL~P  234 (334)
T KOG0278|consen  179 QSLEFNSP-------------------VTSLEVSQDGRILTI-AYGSSVKFWDAK---SFGLLKSYKMP-CNVESASLHP  234 (334)
T ss_pred             EEEecCCC-------------------CcceeeccCCCEEEE-ecCceeEEeccc---cccceeeccCc-cccccccccC
Confidence            99877665                   999999999887655 456789999999   77777766543 4589999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEe-ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKY-KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      +..++++|+.|..++.||..+ +..+..+ ++|.++|.|+.|+|+|...++|+.||+|++|....++.
T Consensus       235 ~k~~fVaGged~~~~kfDy~T-geEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  235 KKEFFVAGGEDFKVYKFDYNT-GEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             CCceEEecCcceEEEEEeccC-CceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence            999999999999999999999 9998886 79999999999999999999999999999999887654

>KOG0316|consensus

Probab=100.00  E-value=1.1e-33  Score=223.04  Aligned_cols=247  Identities=21%  Similarity=0.233  Sum_probs=216.6

Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      .+.++|.++  .-+|+|.++++.|.+|++|+...+.+++++.+|...|..++.+.++..|++|+.|..|.+||+.+|+.+
T Consensus        15 ~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~   94 (307)
T KOG0316|consen   15 CAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVD   94 (307)
T ss_pred             ccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeee
Confidence            557777766  568999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      ..+.+|..                  .|+.++|+.....+++|+.|.++++||.+ +....|++.+......|.++..+ 
T Consensus        95 Rr~rgH~a------------------qVNtV~fNeesSVv~SgsfD~s~r~wDCR-S~s~ePiQildea~D~V~Si~v~-  154 (307)
T KOG0316|consen   95 RRFRGHLA------------------QVNTVRFNEESSVVASGSFDSSVRLWDCR-SRSFEPIQILDEAKDGVSSIDVA-  154 (307)
T ss_pred             eecccccc------------------eeeEEEecCcceEEEeccccceeEEEEcc-cCCCCccchhhhhcCceeEEEec-
Confidence            99999998                  89999999999999999999999999999 77888999888888889999884 


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeE
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTS  321 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~  321 (444)
                       +..|++|+.||+++.||++. ++...-..+  .+|+++.|+++++.++.++.|++|++.|-.+|+++.... |...-..
T Consensus       155 -~heIvaGS~DGtvRtydiR~-G~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eyk  230 (307)
T KOG0316|consen  155 -EHEIVAGSVDGTVRTYDIRK-GTLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYK  230 (307)
T ss_pred             -ccEEEeeccCCcEEEEEeec-ceeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceee
Confidence             66899999999999999999 887766654  589999999999999999999999999999999988765 5554333


Q ss_pred             EEEcCCCcccccchhhhhccccccCCCccccCCCccccccc
Q psy8152         322 ILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQV  362 (444)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~  362 (444)
                      +..+  +.     .....++++++||.+.+|++....+...
T Consensus       231 ldc~--l~-----qsdthV~sgSEDG~Vy~wdLvd~~~~sk  264 (307)
T KOG0316|consen  231 LDCC--LN-----QSDTHVFSGSEDGKVYFWDLVDETQISK  264 (307)
T ss_pred             eeee--ec-----ccceeEEeccCCceEEEEEeccceeeee
Confidence            3222  22     2236799999999999999997665543

>KOG0772|consensus

Probab=100.00  E-value=3.1e-33  Score=243.74  Aligned_cols=294  Identities=17%  Similarity=0.152  Sum_probs=231.1

Q ss_pred             eecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc-----ccceeeccccccEEEEEeCCCeEEEEecCCcE
Q psy8152          35 NVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF-----NTNTDVSFGEGDIVGVSRYDECILTAVKSGDV  109 (444)
Q Consensus        35 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~-----~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i  109 (444)
                      .++..+|+..|.++++. |.|..|++|+.|-+|++||++....     .....+..|......+++.+..|++.+.....
T Consensus       160 Ei~l~hgtk~Vsal~~D-p~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  160 EIQLKHGTKIVSALAVD-PSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             eEeccCCceEEEEeeec-CCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            34444889999999999 7999999999999999999975332     22223456777788889999999999888999


Q ss_pred             EEEEcCCCCccc------------cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEe
Q psy8152         110 KLWRYKTEPDQW------------TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVY  175 (444)
Q Consensus       110 ~iw~~~~~~~~~------------~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~  175 (444)
                      +|+|-...+...            ...+|...++|.+|+| +...+++++.||++++|++...+ .+..++....     
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~-----  313 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPA-----  313 (641)
T ss_pred             eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccC-----
Confidence            999965433221            4567999999999999 77889999999999999998743 2223322111     


Q ss_pred             eeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-eCCCC--CeeEEEEccCCCEEEEEcC
Q psy8152         176 SVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-DIPDV--ALSCITTTNQSHYVIVGST  252 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~--~i~~~~~~~~~~~l~~~~~  252 (444)
                              ...+.+++.++|+|++++||+|+.||.|.+|+.+ +....+.+.+ ..|..  .|+||+||++|++|++-+.
T Consensus       314 --------~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~-~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~  384 (641)
T KOG0772|consen  314 --------GGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKG-SRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGF  384 (641)
T ss_pred             --------CCcccCceeeecCCCcchhhhcccCCceeeeecC-CcccccceEeeeccCCCCceeEEEeccccchhhhccC
Confidence                    0124468999999999999999999999999987 4444444444 35655  8999999999999999999


Q ss_pred             CCcEEEEEcCCCCcceeEeccc--cCceeEEEecCCCCEEEEEEC------CCcEEEEEcCCCceEEEee-cCCceeEEE
Q psy8152         253 TGDMMAVDLRGKGKPCYKYKGF--AGCVKDIACPLNENLILSVSL------DRHFRVHDFHSKKLLRKDY-MQSRLTSIL  323 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~~h--~~~i~~~~~s~~~~~l~s~~~------dg~i~vw~~~~~~~~~~~~-~~~~i~~~~  323 (444)
                      |+++++||++...+++....+.  .-+-+.++|||+.++|++|+.      .|++.+|+..+...++++. ....|..+.
T Consensus       385 D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~  464 (641)
T KOG0772|consen  385 DDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCL  464 (641)
T ss_pred             CCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEe
Confidence            9999999999977888777753  235678999999999999864      5789999999999988886 445566777


Q ss_pred             EcCCCcccccchhhhhccccccCCCcccc
Q psy8152         324 VRSDFSLENETKKEEQEHSEEKGDSDEKY  352 (444)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~s~~~d~~i~~W  352 (444)
                      |++.         -+.+..++.||.++++
T Consensus       465 Whpk---------LNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  465 WHPK---------LNQIFAGSGDGTAHVY  484 (641)
T ss_pred             ecch---------hhheeeecCCCceEEE
Confidence            7644         4567778888998877

>KOG0306|consensus

Probab=100.00  E-value=8.3e-33  Score=251.27  Aligned_cols=274  Identities=16%  Similarity=0.209  Sum_probs=241.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +++.++..+..+.|++|+..+.++    +..+.    .+.+.|..|- |.+.++++|...|.+.+||+.....+.+++  
T Consensus       383 ~d~~~~~Sga~~SikiWn~~t~kc----iRTi~----~~y~l~~~Fv-pgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~--  451 (888)
T KOG0306|consen  383 SDSILLASGAGESIKIWNRDTLKC----IRTIT----CGYILASKFV-PGDRYIVLGTKNGELQVFDLASASLVETIR--  451 (888)
T ss_pred             cCceeeeecCCCcEEEEEccCcce----eEEec----cccEEEEEec-CCCceEEEeccCCceEEEEeehhhhhhhhh--
Confidence            445566666778999999998886    23333    3588999999 789999999999999999999999988886  


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCC-----CCccc-------cccccCCCeEEEEEeccCCEEEEeeCCCe
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKT-----EPDQW-------TNFNVGPQLECMKHNKHSNIIATGGKEND  150 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~-----~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  150 (444)
                      +|.+.++.+  +|++..+++|+.|.+|++|++.-     +...+       ........|.|+.++|++++||++--|++
T Consensus       452 AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnT  531 (888)
T KOG0306|consen  452 AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNT  531 (888)
T ss_pred             ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCe
Confidence            777777766  69999999999999999999642     11111       23334678999999999999999999999


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI  230 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  230 (444)
                      ++||-+.+.+...++.+|.-                  ||.||..+|+++++++|+.|..|++|-+.   .+.+-..+.+
T Consensus       532 VkVyflDtlKFflsLYGHkL------------------PV~smDIS~DSklivTgSADKnVKiWGLd---FGDCHKS~fA  590 (888)
T KOG0306|consen  532 VKVYFLDTLKFFLSLYGHKL------------------PVLSMDISPDSKLIVTGSADKNVKIWGLD---FGDCHKSFFA  590 (888)
T ss_pred             EEEEEecceeeeeeeccccc------------------ceeEEeccCCcCeEEeccCCCceEEeccc---cchhhhhhhc
Confidence            99999999999999999888                  89999999999999999999999999999   8889999999


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                      |...|.++.|.|...++++++.|+.|+-||-.. ...++++.+|...|++++.+|+|.+++++|.|.+|++|......++
T Consensus       591 HdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k-Fe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde~~~  669 (888)
T KOG0306|consen  591 HDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK-FEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDEILI  669 (888)
T ss_pred             ccCceeEEEEcccceeEEEecCcceEEeechhh-hhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCccee
Confidence            999999999999999999999999999999999 9999999999999999999999999999999999999998765444


Q ss_pred             E
Q psy8152         311 R  311 (444)
Q Consensus       311 ~  311 (444)
                      .
T Consensus       670 l  670 (888)
T KOG0306|consen  670 L  670 (888)
T ss_pred             e
Confidence            3

>KOG0305|consensus

Probab=100.00  E-value=1.6e-32  Score=247.05  Aligned_cols=269  Identities=12%  Similarity=0.163  Sum_probs=235.1

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      +.|++|. ...|++|+..++..     ..+..++ ...|+++.|+ +++.+|++|..+|.|.|||....+.+..+.. .|
T Consensus       189 n~laVal-g~~vylW~~~s~~v-----~~l~~~~-~~~vtSv~ws-~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~-~h  259 (484)
T KOG0305|consen  189 NVLAVAL-GQSVYLWSASSGSV-----TELCSFG-EELVTSVKWS-PDGSHLAVGTSDGTVQIWDVKEQKKTRTLRG-SH  259 (484)
T ss_pred             CeEEEEe-cceEEEEecCCCce-----EEeEecC-CCceEEEEEC-CCCCEEEEeecCCeEEEEehhhccccccccC-Cc
Confidence            4556655 44899999988882     2333222 7999999999 8999999999999999999998888888763 28


Q ss_pred             cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee
Q psy8152          87 EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA  165 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~  165 (444)
                      ...|-++++++..+.+|+.++.|..+|++..+.... +.+|...|..+.|++++++||+|+.|+.+.|||.....+++.+
T Consensus       260 ~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~  339 (484)
T KOG0305|consen  260 ASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTF  339 (484)
T ss_pred             CceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEE
Confidence            999999999999999999999999999998776654 6779999999999999999999999999999999888888888


Q ss_pred             ecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEe--CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCS--KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      ..|..                  .|.+++|+|-. .+||+|+  .|++|++||..   .+..+..+. ....|..|.|++
T Consensus       340 ~~H~a------------------AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~---~g~~i~~vd-tgsQVcsL~Wsk  397 (484)
T KOG0305|consen  340 TEHTA------------------AVKALAWCPWQSGLLATGGGSADRCIKFWNTN---TGARIDSVD-TGSQVCSLIWSK  397 (484)
T ss_pred             eccce------------------eeeEeeeCCCccCceEEcCCCcccEEEEEEcC---CCcEecccc-cCCceeeEEEcC
Confidence            88888                  89999999976 7888874  59999999999   777777665 345699999999


Q ss_pred             CCCEEEE--EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         243 QSHYVIV--GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       243 ~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      ..+-|++  |..++.|.||+..+ .+++..+.+|...|..++++|+|..+++|+.|.++++|++-+.
T Consensus       398 ~~kEi~sthG~s~n~i~lw~~ps-~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  398 KYKELLSTHGYSENQITLWKYPS-MKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             CCCEEEEecCCCCCcEEEEeccc-cceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            9876666  77788999999999 9999999999999999999999999999999999999999774

>KOG0310|consensus

Probab=100.00  E-value=8.5e-33  Score=239.78  Aligned_cols=278  Identities=16%  Similarity=0.193  Sum_probs=233.6

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      ..++|++++|+|....-+|+++. -.+.||+..+....+.+.  .....+.+  |..||++|++|...|.|+|||+++..
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~s--rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~  101 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFS--RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRV  101 (487)
T ss_pred             ccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHH--hhccceeEEEeecCCeEEEccCCcCcEEEeccccHH
Confidence            45899999999655555666555 589999998887777664  22444544  45689999999999999999987766


Q ss_pred             ccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         119 DQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .+..+..|+.+|..+.|+| ++..|++|+.|+.+++||+.+......+.+|..                  .|+|.+|+|
T Consensus       102 iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htD------------------YVR~g~~~~  163 (487)
T KOG0310|consen  102 ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTD------------------YVRCGDISP  163 (487)
T ss_pred             HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcc------------------eeEeecccc
Confidence            7777889999999999999 777888999999999999999887778888888                  899999999


Q ss_pred             CC-CEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         198 NS-DKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       198 ~~-~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      .. .++++|+.||+|++||++   .. ..+.++ .|..+|..+.+-|.|..|++++. +.|+|||+-+.++.+..+..|.
T Consensus       164 ~~~hivvtGsYDg~vrl~DtR---~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~  238 (487)
T KOG0310|consen  164 ANDHIVVTGSYDGKVRLWDTR---SLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHN  238 (487)
T ss_pred             CCCeEEEecCCCceEEEEEec---cCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhccc
Confidence            76 588999999999999999   33 555555 48899999999999999998764 4699999997356666666799


Q ss_pred             CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      ..|||+++..++..|++++.|+.|++|++.+.+.+..+..+++|.+++.+++         ...++.|..+|.+-+=.
T Consensus       239 KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~d---------d~t~viGmsnGlv~~rr  307 (487)
T KOG0310|consen  239 KTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPD---------DQTVVIGMSNGLVSIRR  307 (487)
T ss_pred             ceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceeeEEecCC---------CceEEEecccceeeeeh
Confidence            9999999999999999999999999999999999999999999999998864         35567777777776553

>KOG0268|consensus

Probab=100.00  E-value=2.3e-34  Score=240.41  Aligned_cols=284  Identities=15%  Similarity=0.217  Sum_probs=239.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      +|...|.|++=+|..-..+++|+.||.|+|||+....+...|.  .|.+.|..+..+...+++++.|.+|+.|-+... +
T Consensus        64 gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~--AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~-p  140 (433)
T KOG0268|consen   64 GHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFK--AHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGP-P  140 (433)
T ss_pred             ccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheee--cccCceeeEEecccceEEecCCcceeeeeccCC-c
Confidence            9999999999995333889999999999999999999999987  779999999887789999999999999998763 4


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      +. .......+..+.-+..++.++|+|.  .|.|||.....++..+.-...                  .|.++.|+|..
T Consensus       141 ~~-tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~D------------------ti~svkfNpvE  199 (433)
T KOG0268|consen  141 LH-TILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGAD------------------SISSVKFNPVE  199 (433)
T ss_pred             ce-eeeccccccccccccccccccccCc--eeeecccccCCccceeecCCC------------------ceeEEecCCCc
Confidence            43 3444566778887777889999985  599999998888888765555                  59999999987


Q ss_pred             -CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCce
Q psy8152         200 -DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCV  278 (444)
Q Consensus       200 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i  278 (444)
                       ..|++|+.|+.|.|||++   +..++..+... ..-+.|+|+|.+-.+++|+.|..++.||++....++....+|.+.|
T Consensus       200 TsILas~~sDrsIvLyD~R---~~~Pl~KVi~~-mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV  275 (433)
T KOG0268|consen  200 TSILASCASDRSIVLYDLR---QASPLKKVILT-MRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAV  275 (433)
T ss_pred             chheeeeccCCceEEEecc---cCCccceeeee-ccccceecCccccceeeccccccceehhhhhhcccchhhcccceeE
Confidence             778888899999999999   77777765433 3357899999877788899999999999998778999999999999


Q ss_pred             eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC---CceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         279 KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ---SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       279 ~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .++.|||.|+-+++||.|.+|+||.+..+... .++|.   ..|.|+.|+.+         .++++|||+|+.||+|...
T Consensus       276 ~dVdfsptG~EfvsgsyDksIRIf~~~~~~SR-diYhtkRMq~V~~Vk~S~D---------skyi~SGSdd~nvRlWka~  345 (433)
T KOG0268|consen  276 MDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSR-DIYHTKRMQHVFCVKYSMD---------SKYIISGSDDGNVRLWKAK  345 (433)
T ss_pred             EEeccCCCcchhccccccceEEEeecCCCcch-hhhhHhhhheeeEEEEecc---------ccEEEecCCCcceeeeecc
Confidence            99999999999999999999999999887663 34444   45888888865         4799999999999999877


Q ss_pred             cccccc
Q psy8152         356 HFEMNQ  361 (444)
Q Consensus       356 ~~~~~~  361 (444)
                      ..+.+.
T Consensus       346 Aseklg  351 (433)
T KOG0268|consen  346 ASEKLG  351 (433)
T ss_pred             hhhhcC
Confidence            544433

>KOG0283|consensus

Probab=100.00  E-value=6e-33  Score=256.33  Aligned_cols=240  Identities=17%  Similarity=0.254  Sum_probs=201.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-------------------------------------------
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-------------------------------------------   76 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-------------------------------------------   76 (444)
                      +|.++|++|.|+ ++|+|||+|+.|+.|+||.+...+                                           
T Consensus       265 ah~gaIw~mKFS-~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  265 AHKGAIWAMKFS-HDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             ccCCcEEEEEeC-CCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            799999999999 899999999999999999875400                                           


Q ss_pred             -----------------cccceeeccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-
Q psy8152          77 -----------------FNTNTDVSFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-  137 (444)
Q Consensus        77 -----------------~~~~~~~~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-  137 (444)
                                       .++  .+.+|..-|+.+++. +++|++++.|.+|++|++....|+. .+.|...|+|++|+| 
T Consensus       344 ~s~~~~~p~~~f~f~ekP~~--ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~-~F~HndfVTcVaFnPv  420 (712)
T KOG0283|consen  344 QSPCVLLPLKAFVFSEKPFC--EFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLK-VFSHNDFVTCVAFNPV  420 (712)
T ss_pred             CCccccCCCccccccccchh--hhhccchhheecccccCCeeEeccccccEEeecCCCcceee-EEecCCeeEEEEeccc
Confidence                             000  235788888899874 6789999999999999999999995 899999999999999 


Q ss_pred             cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      |.++|++|+-||.|+||++...+.+.-...+.                   -|++++|.|+|++.++|+.+|.+++|+..
T Consensus       421 DDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~-------------------lITAvcy~PdGk~avIGt~~G~C~fY~t~  481 (712)
T KOG0283|consen  421 DDRYFISGSLDGKVRLWSISDKKVVDWNDLRD-------------------LITAVCYSPDGKGAVIGTFNGYCRFYDTE  481 (712)
T ss_pred             CCCcEeecccccceEEeecCcCeeEeehhhhh-------------------hheeEEeccCCceEEEEEeccEEEEEEcc
Confidence            99999999999999999999877665544443                   49999999999999999999999999998


Q ss_pred             CCCCccceEEEe--CC------CCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccC--ceeEEEecCC
Q psy8152         218 ITTQRRPVLKVD--IP------DVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG--CVKDIACPLN  286 (444)
Q Consensus       218 ~~~~~~~~~~~~--~~------~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~--~i~~~~~s~~  286 (444)
                         ..+....+.  .+      ...|+.+.|.|. ...|++.+.|..|||||.+. ..++..|+|+..  .=....|+.+
T Consensus       482 ---~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~-~~lv~KfKG~~n~~SQ~~Asfs~D  557 (712)
T KOG0283|consen  482 ---GLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRD-KDLVHKFKGFRNTSSQISASFSSD  557 (712)
T ss_pred             ---CCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccc-hhhhhhhcccccCCcceeeeEccC
Confidence               444444332  11      237999999985 34577888999999999998 899999997543  2245689999


Q ss_pred             CCEEEEEECCCcEEEEEcCC
Q psy8152         287 ENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       287 ~~~l~s~~~dg~i~vw~~~~  306 (444)
                      |++|++++.|..|+||++..
T Consensus       558 gk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  558 GKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             CCEEEEeecCceEEEEeCCC
Confidence            99999999999999999854

>KOG0292|consensus

Probab=100.00  E-value=9.1e-33  Score=255.13  Aligned_cols=282  Identities=11%  Similarity=0.116  Sum_probs=231.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .-.|+++-..|.|++||.+.+.+       +..+ .|.++|+.++|+ |.+.++++|+.|-.|+||+..+.+++.++.  
T Consensus        21 rPwILtslHsG~IQlWDYRM~tl-------i~rFdeHdGpVRgv~FH-~~qplFVSGGDDykIkVWnYk~rrclftL~--   90 (1202)
T KOG0292|consen   21 RPWILTSLHSGVIQLWDYRMGTL-------IDRFDEHDGPVRGVDFH-PTQPLFVSGGDDYKIKVWNYKTRRCLFTLL--   90 (1202)
T ss_pred             CCEEEEeecCceeeeehhhhhhH-------HhhhhccCCccceeeec-CCCCeEEecCCccEEEEEecccceehhhhc--
Confidence            46789999999999999988875       2333 899999999999 799999999999999999999999988876  


Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      +|-.-|..+  ++.-..|++++.|.+|+||+..+++++..+.+|...|.|..|+|...+++++|-|.+|+|||+..-+.-
T Consensus        91 GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk  170 (1202)
T KOG0292|consen   91 GHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKK  170 (1202)
T ss_pred             cccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhcc
Confidence            777666554  556678999999999999999999999999999999999999999999999999999999999652211


Q ss_pred             eeee-----------------cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce
Q psy8152         163 FSAK-----------------NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV  225 (444)
Q Consensus       163 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  225 (444)
                      ..-.                 +....+....+      ..|...|+-++|+|.-.+|++|+.|..|++|.+. ..+.-.+
T Consensus       171 ~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VL------EGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmn-etKaWEv  243 (1202)
T KOG0292|consen  171 NKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVL------EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN-ETKAWEV  243 (1202)
T ss_pred             CCCCCCchhhhhccccchhhcCCcCeeeeeee------cccccccceEEecCCcceEEecCCcceeeEEEec-cccceee
Confidence            1100                 00011111111      1122358999999999999999999999999998 3333445


Q ss_pred             EEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         226 LKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       226 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      -+..+|.+.|+++-|+|...+|++.+.|++|+|||+.. .+.+++|+......+.++-+|..+++++| .|+-+.||.+.
T Consensus       244 DtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~k-Rt~v~tfrrendRFW~laahP~lNLfAAg-HDsGm~VFkle  321 (1202)
T KOG0292|consen  244 DTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTK-RTSVQTFRRENDRFWILAAHPELNLFAAG-HDSGMIVFKLE  321 (1202)
T ss_pred             hhhhcccCCcceEEecCccceeEecCCCccEEEEeccc-ccceeeeeccCCeEEEEEecCCcceeeee-cCCceEEEEEc
Confidence            56789999999999999999999999999999999999 99999998777889999999999877765 55556677765


Q ss_pred             C
Q psy8152         306 S  306 (444)
Q Consensus       306 ~  306 (444)
                      .
T Consensus       322 R  322 (1202)
T KOG0292|consen  322 R  322 (1202)
T ss_pred             c
Confidence            3

>KOG0274|consensus

Probab=100.00  E-value=1.1e-32  Score=257.54  Aligned_cols=276  Identities=14%  Similarity=0.212  Sum_probs=247.5

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-eeeccccccEEEEEeC--CCeEEEEecCCcEEEEEcCCC
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN-TDVSFGEGDIVGVSRY--DECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-~~~~~~~~~v~~~s~~--~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      |...+.+..|.   ..++++++.+++|++|+..++..+.. +.  +|.+.|.++...  +.+|++|+.|.++++||..++
T Consensus       207 ~~~~~~~~q~~---~~~~~~~s~~~tl~~~~~~~~~~i~~~l~--GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg  281 (537)
T KOG0274|consen  207 DDHVVLCLQLH---DGFFKSGSDDSTLHLWDLNNGYLILTRLV--GHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTG  281 (537)
T ss_pred             Ccchhhhheee---cCeEEecCCCceeEEeecccceEEEeecc--CCCCCceeEEEecCCCEEEEEecCCcEEeEecCCC
Confidence            56778888888   78999999999999999998888877 54  889999998765  889999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      ++...+.+|...|.++...  ...+++|+.|.+|++|++.++..+..+.+|..                  +|+++..+ 
T Consensus       282 ~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~------------------~V~~v~~~-  340 (537)
T KOG0274|consen  282 ECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTG------------------PVNCVQLD-  340 (537)
T ss_pred             cEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccc------------------cEEEEEec-
Confidence            9999999999999999884  56788899999999999999999999988777                  89999997 


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-cceeEeccccC
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG-KPCYKYKGFAG  276 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~h~~  276 (444)
                       +.++++|+.|++|++|++.   ..+++.++.+|...|.++.+.+. ..+++|+.|++|++||+++ . +++.++.+|..
T Consensus       341 -~~~lvsgs~d~~v~VW~~~---~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~-~~~c~~tl~~h~~  414 (537)
T KOG0274|consen  341 -EPLLVSGSYDGTVKVWDPR---TGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRT-KRKCIHTLQGHTS  414 (537)
T ss_pred             -CCEEEEEecCceEEEEEhh---hceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCc-hhhhhhhhcCCcc
Confidence             7899999999999999999   99999999999999999988665 8999999999999999999 8 99999999999


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec--CCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM--QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      .+..+.+  .+++|++++.|++|++||..+++++..+..  ...|..+++.           ...+++++.++.+++|++
T Consensus       415 ~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~-----------~~~il~s~~~~~~~l~dl  481 (537)
T KOG0274|consen  415 LVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG-----------KEEILCSSDDGSVKLWDL  481 (537)
T ss_pred             ccccccc--ccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC-----------cceEEEEecCCeeEEEec
Confidence            8877665  568999999999999999999999999875  3677777765           145788999999999999


Q ss_pred             Ccccccc
Q psy8152         355 EHFEMNQ  361 (444)
Q Consensus       355 ~~~~~~~  361 (444)
                      ..+...+
T Consensus       482 ~~~~~~~  488 (537)
T KOG0274|consen  482 RSGTLIR  488 (537)
T ss_pred             ccCchhh
Confidence            9877665

>KOG0288|consensus

Probab=100.00  E-value=2e-33  Score=238.65  Aligned_cols=278  Identities=14%  Similarity=0.159  Sum_probs=237.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .|.+.|..+.|- ++...|++|+.|..|++|++...+....-.+.+..++|+++  .++++++++++.|+.+++|++...
T Consensus       173 ~h~gev~~v~~l-~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~  251 (459)
T KOG0288|consen  173 AHEGEVHDVEFL-RNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSL  251 (459)
T ss_pred             ccccccceeEEc-cCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccch
Confidence            789999999999 68899999999999999999877733333333556677766  467889999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +...++.+|...|+++.|......+++|+.|.+|++||+....+..+......                   +..|+.+ 
T Consensus       252 r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~-------------------cnDI~~~-  311 (459)
T KOG0288|consen  252 RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQ-------------------CNDIVCS-  311 (459)
T ss_pred             hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccccccc-------------------ccceEec-
Confidence            99989999999999999988666699999999999999999888776654443                   7777776 


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc---
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF---  274 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h---  274 (444)
                       ...+++|..|++|++||++   ...++.....+. .|+++..++++..|++++.|.++.++|+++ ....+.+.+.   
T Consensus       312 -~~~~~SgH~DkkvRfwD~R---s~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt-~eI~~~~sA~g~k  385 (459)
T KOG0288|consen  312 -ISDVISGHFDKKVRFWDIR---SADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRT-KEIRQTFSAEGFK  385 (459)
T ss_pred             -ceeeeecccccceEEEecc---CCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeeccc-ccEEEEeeccccc
Confidence             4678899999999999999   778888877766 799999999999999999999999999999 8877777632   


Q ss_pred             -cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee--cCC-ceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         275 -AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY--MQS-RLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       275 -~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~-~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                       ....+.+.|||++.|+++||.||.|+||++.++++...+.  +.. .|++++|.+.         +..+++++.++.+.
T Consensus       386 ~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~s---------G~~Llsadk~~~v~  456 (459)
T KOG0288|consen  386 CASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPS---------GSGLLSADKQKAVT  456 (459)
T ss_pred             cccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCC---------CchhhcccCCcceE
Confidence             2357889999999999999999999999999999988876  333 5999998854         56899999999999


Q ss_pred             ccC
Q psy8152         351 KYD  353 (444)
Q Consensus       351 ~W~  353 (444)
                      +|.
T Consensus       457 lW~  459 (459)
T KOG0288|consen  457 LWT  459 (459)
T ss_pred             ecC
Confidence            994

>KOG0643|consensus

Probab=100.00  E-value=9.3e-32  Score=216.07  Aligned_cols=280  Identities=11%  Similarity=0.103  Sum_probs=233.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|..+++.+.|+ .++.+|++++.|.++.||-..+|+.+.++.  +|.+.|+++  .++.+++++|+.|.++++||+++|
T Consensus         8 GHERplTqiKyN-~eGDLlFscaKD~~~~vw~s~nGerlGty~--GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    8 GHERPLTQIKYN-REGDLLFSCAKDSTPTVWYSLNGERLGTYD--GHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             cCccccceEEec-CCCcEEEEecCCCCceEEEecCCceeeeec--CCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            899999999999 799999999999999999998999999986  888888877  567889999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeC-----CCeEEEEEcCC-------ceeeeeeecccceeeEeeeCCCccccc
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGK-----ENDLKLWDLNT-------TKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      +++. ....+.+|..+.|++.+++++....     .+.|.++|++.       ..+...+..+..               
T Consensus        85 k~la-~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~s---------------  148 (327)
T KOG0643|consen   85 KQLA-TWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDS---------------  148 (327)
T ss_pred             cEEE-EeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCcc---------------
Confidence            9995 6778889999999999988887654     46799999984       445666666555               


Q ss_pred             CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK  264 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  264 (444)
                         .++.+-|.|-+++|++|..+|.|.+||++   ++ ..+.....|...|+.|+++|+..++++++.|.+-++||+.+ 
T Consensus       149 ---kit~a~Wg~l~~~ii~Ghe~G~is~~da~---~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t-  221 (327)
T KOG0643|consen  149 ---KITSALWGPLGETIIAGHEDGSISIYDAR---TGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT-  221 (327)
T ss_pred             ---ceeeeeecccCCEEEEecCCCcEEEEEcc---cCceeeechhhhccccccccccCCcceEEecccCccceeeeccc-
Confidence               79999999999999999999999999999   54 55555678889999999999999999999999999999999 


Q ss_pred             CcceeEeccccCceeEEEecCCCCEEEEEECCCc--E------------EEEEcCCCceEEEee-cCCceeEEEEcCCCc
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH--F------------RVHDFHSKKLLRKDY-MQSRLTSILVRSDFS  329 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~--i------------~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~  329 (444)
                      ...+.++. -..||++.+++|....++.|+....  |            ++|++-..+.+.++. |-++|++++|+|   
T Consensus       222 l~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhP---  297 (327)
T KOG0643|consen  222 LEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHP---  297 (327)
T ss_pred             eeeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECC---
Confidence            88888887 3679999999998776666653322  2            122222222333333 789999999985   


Q ss_pred             ccccchhhhhccccccCCCccccCCC
Q psy8152         330 LENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       330 ~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                            +++..+||++||.||+--..
T Consensus       298 ------dGksYsSGGEDG~VR~h~Fd  317 (327)
T KOG0643|consen  298 ------DGKSYSSGGEDGYVRLHHFD  317 (327)
T ss_pred             ------CCcccccCCCCceEEEEEec
Confidence                  47789999999999987544

>KOG0643|consensus

Probab=100.00  E-value=5e-32  Score=217.62  Aligned_cols=272  Identities=14%  Similarity=0.122  Sum_probs=222.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .++..|++++.|....+|-..+++.    +-.+.  +|+++|+|+... -+.++|++|+.|.++++||+.+|+++..+..
T Consensus        20 ~eGDLlFscaKD~~~~vw~s~nGer----lGty~--GHtGavW~~Did-~~s~~liTGSAD~t~kLWDv~tGk~la~~k~   92 (327)
T KOG0643|consen   20 REGDLLFSCAKDSTPTVWYSLNGER----LGTYD--GHTGAVWCCDID-WDSKHLITGSADQTAKLWDVETGKQLATWKT   92 (327)
T ss_pred             CCCcEEEEecCCCCceEEEecCCce----eeeec--CCCceEEEEEec-CCcceeeeccccceeEEEEcCCCcEEEEeec
Confidence            4678999999999999998767664    23333  999999999999 7899999999999999999999999998864


Q ss_pred             ccccccEEEEEeCCCeEEEEec-----CCcEEEEEcC-------CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeE
Q psy8152          84 SFGEGDIVGVSRYDECILTAVK-----SGDVKLWRYK-------TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDL  151 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~-----dg~i~iw~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  151 (444)
                       +.......|++.|++++.+..     .+.|.+++++       ..++...+..+...++.+-|.|-+.+|++|..+|.|
T Consensus        93 -~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~i  171 (327)
T KOG0643|consen   93 -NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSI  171 (327)
T ss_pred             -CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcE
Confidence             224444567888988777654     4679999987       344555666788999999999999999999999999


Q ss_pred             EEEEcCCcee-eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152         152 KLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI  230 (444)
Q Consensus       152 ~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  230 (444)
                      .+||+++++. +.....|..                  .|+.|+++|+..++++++.|.+.++||.+   ....+.++. 
T Consensus       172 s~~da~~g~~~v~s~~~h~~------------------~Ind~q~s~d~T~FiT~s~Dttakl~D~~---tl~v~Kty~-  229 (327)
T KOG0643|consen  172 SIYDARTGKELVDSDEEHSS------------------KINDLQFSRDRTYFITGSKDTTAKLVDVR---TLEVLKTYT-  229 (327)
T ss_pred             EEEEcccCceeeechhhhcc------------------ccccccccCCcceEEecccCccceeeecc---ceeeEEEee-
Confidence            9999999754 444455665                  79999999999999999999999999999   777777765 


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCcE--------------EEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGDM--------------MAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~i--------------~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                      ...||++.+++|...+++.|+.....              ++|++-. .+.+..+++|-++|++++|+|+|+..++|+.|
T Consensus       230 te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~-eEEigrvkGHFGPINsvAfhPdGksYsSGGED  308 (327)
T KOG0643|consen  230 TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIF-EEEIGRVKGHFGPINSVAFHPDGKSYSSGGED  308 (327)
T ss_pred             ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHH-HHHhccccccccCcceeEECCCCcccccCCCC
Confidence            56789999999987777776543222              2222222 35667788999999999999999999999999


Q ss_pred             CcEEEEEcCC
Q psy8152         297 RHFRVHDFHS  306 (444)
Q Consensus       297 g~i~vw~~~~  306 (444)
                      |.|++.-+..
T Consensus       309 G~VR~h~Fd~  318 (327)
T KOG0643|consen  309 GYVRLHHFDS  318 (327)
T ss_pred             ceEEEEEecc
Confidence            9999986543

>KOG0310|consensus

Probab=100.00  E-value=1.6e-31  Score=231.84  Aligned_cols=272  Identities=15%  Similarity=0.209  Sum_probs=224.7

Q ss_pred             CCCCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           1 MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         1 ~s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      +++.+++.+++.++- .+.||+..+... .+++.     .....|.++.|- .+|.+|++|...|.|+|||+.+...+..
T Consensus        34 fsp~~P~d~aVt~S~-rvqly~~~~~~~-~k~~s-----rFk~~v~s~~fR-~DG~LlaaGD~sG~V~vfD~k~r~iLR~  105 (487)
T KOG0310|consen   34 FSPKHPYDFAVTSSV-RVQLYSSVTRSV-RKTFS-----RFKDVVYSVDFR-SDGRLLAAGDESGHVKVFDMKSRVILRQ  105 (487)
T ss_pred             cCCCCCCceEEeccc-EEEEEecchhhh-hhhHH-----hhccceeEEEee-cCCeEEEccCCcCcEEEeccccHHHHHH
Confidence            467778888888765 678998776653 22222     346889999999 8999999999999999999777667777


Q ss_pred             eeeccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC
Q psy8152          81 TDVSFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        81 ~~~~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~  158 (444)
                      +..+.+...++.|+|. +..|++|+.|+.+++||+.+......+.+|...|.|.+|+| ++.++++|+.||.|++||++.
T Consensus       106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~  185 (487)
T KOG0310|consen  106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRS  185 (487)
T ss_pred             HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEecc
Confidence            7645445555667775 56688899999999999998886557888999999999999 777999999999999999998


Q ss_pred             c-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         159 T-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       159 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      . ..+..+ .|..                  +|..+.+.|.|.+|++++.+ .|++||+.  ..++.+..+..|...|+|
T Consensus       186 ~~~~v~el-nhg~------------------pVe~vl~lpsgs~iasAgGn-~vkVWDl~--~G~qll~~~~~H~KtVTc  243 (487)
T KOG0310|consen  186 LTSRVVEL-NHGC------------------PVESVLALPSGSLIASAGGN-SVKVWDLT--TGGQLLTSMFNHNKTVTC  243 (487)
T ss_pred             CCceeEEe-cCCC------------------ceeeEEEcCCCCEEEEcCCC-eEEEEEec--CCceehhhhhcccceEEE
Confidence            6 555554 3444                  79999999999999998765 89999998  234444445559999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      +++..++..|++|+-|+.+++||+.+ .+.++.+. ..++|.+++.+|+++.++.|..+|.+.+=+.
T Consensus       244 L~l~s~~~rLlS~sLD~~VKVfd~t~-~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~  308 (487)
T KOG0310|consen  244 LRLASDSTRLLSGSLDRHVKVFDTTN-YKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR  308 (487)
T ss_pred             EEeecCCceEeecccccceEEEEccc-eEEEEeee-cccceeeEEecCCCceEEEecccceeeeehh
Confidence            99999999999999999999999888 89998887 5789999999999999999999998877643

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=2.9e-30  Score=241.27  Aligned_cols=266  Identities=14%  Similarity=0.108  Sum_probs=204.4

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc----------ccc-ceeeccccccEEEE--Ee-CCCeEEEEecCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN----------FNT-NTDVSFGEGDIVGV--SR-YDECILTAVKSG  107 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~----------~~~-~~~~~~~~~~v~~~--s~-~~~~l~~~~~dg  107 (444)
                      -..|.....+ +++..+++++.+.....|+...+.          ... ...+.+|...|.++  +| ++++|++|+.|+
T Consensus        20 ~~~i~~~~~~-~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg   98 (493)
T PTZ00421         20 FLNVTPSTAL-WDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG   98 (493)
T ss_pred             eecccccccc-CCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence            3445555555 455666666666666666644332          111 11235788888776  56 678999999999


Q ss_pred             cEEEEEcCCCC-------ccccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCC
Q psy8152         108 DVKLWRYKTEP-------DQWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKP  179 (444)
Q Consensus       108 ~i~iw~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (444)
                      +|++|++..+.       ++..+.+|...|.+++|+|. +++|++++.|+.|+|||+.+++.+..+..|..         
T Consensus        99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~---------  169 (493)
T PTZ00421         99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSD---------  169 (493)
T ss_pred             EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCC---------
Confidence            99999997652       34457789999999999996 47999999999999999999998888877776         


Q ss_pred             CcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC-eeEEEEccCCCEEEEEc----CCC
Q psy8152         180 DEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA-LSCITTTNQSHYVIVGS----TTG  254 (444)
Q Consensus       180 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~----~dg  254 (444)
                               .|++++|+|++.+|++++.|++|++||++   ....+..+.+|... +..+.|.+++..|++++    .|+
T Consensus       170 ---------~V~sla~spdG~lLatgs~Dg~IrIwD~r---sg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr  237 (493)
T PTZ00421        170 ---------QITSLEWNLDGSLLCTTSKDKKLNIIDPR---DGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQR  237 (493)
T ss_pred             ---------ceEEEEEECCCCEEEEecCCCEEEEEECC---CCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCC
Confidence                     79999999999999999999999999999   67778888888764 45678999877777643    478


Q ss_pred             cEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCceEEEee--cCCceeEEEEcCCCc
Q psy8152         255 DMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSVS-LDRHFRVHDFHSKKLLRKDY--MQSRLTSILVRSDFS  329 (444)
Q Consensus       255 ~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~~~~~~  329 (444)
                      .|++||+++...++..+..+ ...+....|++++++|++++ .|+.|++|++.+++++....  ...++.+++|.+.+.
T Consensus       238 ~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~  316 (493)
T PTZ00421        238 QIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWS  316 (493)
T ss_pred             eEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccccc
Confidence            99999999734455554433 34555668899999998887 59999999999988776543  455688888887765

>KOG0288|consensus

Probab=100.00  E-value=3.4e-32  Score=231.19  Aligned_cols=265  Identities=11%  Similarity=0.189  Sum_probs=224.7

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +...|++|+.|..|++|+....+.     .....+ +..++|+.+.|. +++.++++++.|+.+++|++...+...++. 
T Consensus       186 ~sdtlatgg~Dr~Ik~W~v~~~k~-----~~~~tLaGs~g~it~~d~d-~~~~~~iAas~d~~~r~Wnvd~~r~~~TLs-  258 (459)
T KOG0288|consen  186 NSDTLATGGSDRIIKLWNVLGEKS-----ELISTLAGSLGNITSIDFD-SDNKHVIAASNDKNLRLWNVDSLRLRHTLS-  258 (459)
T ss_pred             Ccchhhhcchhhhhhhhhcccchh-----hhhhhhhccCCCcceeeec-CCCceEEeecCCCceeeeeccchhhhhhhc-
Confidence            347899999999999999987772     223333 677899999999 789999999999999999999999999987 


Q ss_pred             ccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       +|...|+++..  ....+++|+.|.+|++||+....|....+ ....+..|..+  ...+++|..|+.|++||+++..+
T Consensus       259 -GHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~  334 (459)
T KOG0288|consen  259 -GHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADK  334 (459)
T ss_pred             -ccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec--ceeeeecccccceEEEeccCCce
Confidence             68999998853  33349999999999999999988886443 34456667665  56789999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC----CCCeeE
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP----DVALSC  237 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~i~~  237 (444)
                      ......++.                   |+++..++++..|++++.|.++.++|++   .......+...    ....+.
T Consensus       335 ~~sv~~gg~-------------------vtSl~ls~~g~~lLsssRDdtl~viDlR---t~eI~~~~sA~g~k~asDwtr  392 (459)
T KOG0288|consen  335 TRSVPLGGR-------------------VTSLDLSMDGLELLSSSRDDTLKVIDLR---TKEIRQTFSAEGFKCASDWTR  392 (459)
T ss_pred             eeEeecCcc-------------------eeeEeeccCCeEEeeecCCCceeeeecc---cccEEEEeeccccccccccce
Confidence            988877766                   9999999999999999999999999999   55555554432    234789


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC--ceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG--CVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~--~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      +.|||++.|+++|+.||.|+||++.+ +++...+.....  .|++++|+|.|..|++++.++.+.+|.
T Consensus       393 vvfSpd~~YvaAGS~dgsv~iW~v~t-gKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  393 VVFSPDGSYVAAGSADGSVYIWSVFT-GKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             eEECCCCceeeeccCCCcEEEEEccC-ceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            99999999999999999999999999 999988885444  599999999999999999999999993

>KOG0308|consensus

Probab=100.00  E-value=1e-31  Score=240.51  Aligned_cols=331  Identities=14%  Similarity=0.163  Sum_probs=255.7

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceee--eeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--ccc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKN--IQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--NFN   78 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~   78 (444)
                      .+++++|++|+.||.|++|++.........  +..++  .|...|..++.. .+++.|+++|.|-+|++|+...+  -++
T Consensus        34 a~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme--~HsDWVNDiiL~-~~~~tlIS~SsDtTVK~W~~~~~~~~c~  110 (735)
T KOG0308|consen   34 APNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASME--HHSDWVNDIILC-GNGKTLISASSDTTVKVWNAHKDNTFCM  110 (735)
T ss_pred             CCCCceEEecCCCceEEEeccccccCCcccchhhhhh--hhHhHHhhHHhh-cCCCceEEecCCceEEEeecccCcchhH
Confidence            345667999999999999998655431111  12222  799999999999 78999999999999999999877  455


Q ss_pred             cceeeccccccEEEEEe---CCCeEEEEecCCcEEEEEcCCCCc--cc--------ccc-ccCCCeEEEEEeccCCEEEE
Q psy8152          79 TNTDVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYKTEPD--QW--------TNF-NVGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        79 ~~~~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~--~~--------~~~-~~~~~v~~~~~~~~~~~l~~  144 (444)
                      .++.  .|..-|.++++   +..++|+|+.|+.|.+||+.++..  +.        .+. ++...|++++.++.+..|++
T Consensus       111 stir--~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivs  188 (735)
T KOG0308|consen  111 STIR--THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVS  188 (735)
T ss_pred             hhhh--cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEe
Confidence            5554  77888888764   678899999999999999997732  11        222 67889999999999999999


Q ss_pred             eeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152         145 GGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP  224 (444)
Q Consensus       145 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  224 (444)
                      |+..+.|++||.++++.+..+++|..                  -|+.+..+++|..+++++.||+|++||+.   ..++
T Consensus       189 Ggtek~lr~wDprt~~kimkLrGHTd------------------NVr~ll~~dDGt~~ls~sSDgtIrlWdLg---qQrC  247 (735)
T KOG0308|consen  189 GGTEKDLRLWDPRTCKKIMKLRGHTD------------------NVRVLLVNDDGTRLLSASSDGTIRLWDLG---QQRC  247 (735)
T ss_pred             cCcccceEEeccccccceeeeecccc------------------ceEEEEEcCCCCeEeecCCCceEEeeecc---ccce
Confidence            99999999999999999999999988                  79999999999999999999999999999   9999


Q ss_pred             eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         225 VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       225 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      +.++..|...|.++..+|+-.++++|+.||.|+.=|++++ .....+.....+|..+..+...+-+-+++.|+.|+-|..
T Consensus       248 l~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~-~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~  326 (735)
T KOG0308|consen  248 LATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP-AKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKL  326 (735)
T ss_pred             eeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc-hhheEeecCCCchhhhhhccccCCceeeeccccceecCC
Confidence            9999999999999999999999999999999999999984 333333335667888887755555577889999999977


Q ss_pred             CCCceEEEee----c-C---CceeEEEEcCC------C--cccccchhhhhccccccCCCccccCCCccccc
Q psy8152         305 HSKKLLRKDY----M-Q---SRLTSILVRSD------F--SLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       305 ~~~~~~~~~~----~-~---~~i~~~~~~~~------~--~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      .....+....    + .   .++.+....++      +  -.-+...+.+.++|-...|.+.+||+..+...
T Consensus       327 ~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~  398 (735)
T KOG0308|consen  327 EPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKV  398 (735)
T ss_pred             ccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeeh
Confidence            5432211100    0 0   00111100010      0  01112345578889999999999999875543

>KOG1539|consensus

Probab=100.00  E-value=3.5e-30  Score=236.90  Aligned_cols=327  Identities=13%  Similarity=0.161  Sum_probs=261.8

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      +.|++|+..|.+++|++.+++.    +..++  ++...|+++.=+ |--+.++.|..+|+|.|++++.++.+..|+..  
T Consensus       173 NKIvvGs~~G~lql~Nvrt~K~----v~~f~--~~~s~IT~ieqs-PaLDVVaiG~~~G~ViifNlK~dkil~sFk~d--  243 (910)
T KOG1539|consen  173 NKIVVGSSQGRLQLWNVRTGKV----VYTFQ--EFFSRITAIEQS-PALDVVAIGLENGTVIIFNLKFDKILMSFKQD--  243 (910)
T ss_pred             eeEEEeecCCcEEEEEeccCcE----EEEec--ccccceeEeccC-CcceEEEEeccCceEEEEEcccCcEEEEEEcc--
Confidence            5689999999999999999986    23344  678999999999 68899999999999999999999999999632  


Q ss_pred             cccEEEEEe--CCC-eEEEEecCCcEEEEEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce--
Q psy8152          87 EGDIVGVSR--YDE-CILTAVKSGDVKLWRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK--  160 (444)
Q Consensus        87 ~~~v~~~s~--~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~--  160 (444)
                      .++|+++++  ||. .+++|+..|.+.+||++..+.+..+. .|.+.|..+.|.|....+++++.|+.+++|=..++.  
T Consensus       244 ~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~  323 (910)
T KOG1539|consen  244 WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGV  323 (910)
T ss_pred             ccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCc
Confidence            578887775  565 57777778999999999888877555 688999999999999999999999999988554311  


Q ss_pred             --eeeeeecccceeeEeee-------------CC----------------------------------------------
Q psy8152         161 --NIFSAKNVSHRVLVYSV-------------KP----------------------------------------------  179 (444)
Q Consensus       161 --~~~~~~~~~~~~~~~~~-------------~~----------------------------------------------  179 (444)
                        .+..-.+|......+.+             .+                                              
T Consensus       324 pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~  403 (910)
T KOG1539|consen  324 PRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAF  403 (910)
T ss_pred             chheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeec
Confidence              11111111110000000             00                                              


Q ss_pred             ----------------------------Cc---cccc------CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc
Q psy8152         180 ----------------------------DE---FDLR------RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR  222 (444)
Q Consensus       180 ----------------------------~~---~~~~------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  222 (444)
                                                  ..   ..+.      ....+++++.++.|++.+.|+..|.|-+|++.   .+
T Consensus       404 ~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQ---SG  480 (910)
T KOG1539|consen  404 ENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQ---SG  480 (910)
T ss_pred             ccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcc---cC
Confidence                                        00   0011      12348999999999999999999999999999   66


Q ss_pred             cceEEE---eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC----------------------------------
Q psy8152         223 RPVLKV---DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG----------------------------------  265 (444)
Q Consensus       223 ~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----------------------------------  265 (444)
                      ....++   +.|..+|+.++...-++.+++++.+|.+++||... .                                  
T Consensus       481 i~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~-k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~  559 (910)
T KOG1539|consen  481 IHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKK-KVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIR  559 (910)
T ss_pred             eeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCC-cceeeeeccCCCcceeeeeehhhhhhhhcCceeEE
Confidence            666666   58999999999988899999999999999999875 2                                  


Q ss_pred             -------cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhh
Q psy8152         266 -------KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEE  338 (444)
Q Consensus       266 -------~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  338 (444)
                             +.++.|.+|...|++++|||+|++|++++.|++|++||+.++.++-.+....+..++.|+|         .+.
T Consensus       560 vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SP---------ngD  630 (910)
T KOG1539|consen  560 VVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSP---------NGD  630 (910)
T ss_pred             EEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECC---------CCC
Confidence                   2344566899999999999999999999999999999999999999999999999999884         468


Q ss_pred             hccccccC-CCccccCCC
Q psy8152         339 QEHSEEKG-DSDEKYDPE  355 (444)
Q Consensus       339 ~~~s~~~d-~~i~~W~~~  355 (444)
                      +|+++..| ..|.+|.-.
T Consensus       631 ~LAT~Hvd~~gIylWsNk  648 (910)
T KOG1539|consen  631 FLATVHVDQNGIYLWSNK  648 (910)
T ss_pred             EEEEEEecCceEEEEEch
Confidence            99999988 779999644

>KOG0640|consensus

Probab=100.00  E-value=2.3e-31  Score=218.24  Aligned_cols=282  Identities=15%  Similarity=0.160  Sum_probs=228.2

Q ss_pred             CCCcccEEEecCCCcEEEEEcCC------Cccc-----eeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSK------DKCI-----IKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIY   70 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~------~~~~-----~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw   70 (444)
                      +.++..+++|+.|..|+|.++..      .+..     ...-..+..+ .|...|+++.|+ |....|++|+.|++|++|
T Consensus       121 s~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH-Pre~ILiS~srD~tvKlF  199 (430)
T KOG0640|consen  121 SPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH-PRETILISGSRDNTVKLF  199 (430)
T ss_pred             CCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec-chhheEEeccCCCeEEEE
Confidence            35789999999999999999862      1110     1111233334 899999999999 799999999999999999


Q ss_pred             eCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCCCcccc---ccccCCCeEEEEEeccCCEEEEe
Q psy8152          71 DTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTEPDQWT---NFNVGPQLECMKHNKHSNIIATG  145 (444)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~  145 (444)
                      |+.+....+.++......+|.  +|+|.|.+|++|..-.++++||+.+.++...   -.+|.+.|+++.+++.+++.++|
T Consensus       200 DfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTa  279 (430)
T KOG0640|consen  200 DFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTA  279 (430)
T ss_pred             ecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEe
Confidence            998766655554434444554  5578999999999999999999999887642   33589999999999999999999


Q ss_pred             eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce
Q psy8152         146 GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV  225 (444)
Q Consensus       146 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  225 (444)
                      +.||.|++||--.++++.++....+                ...|.+..|..+++++++.+.|..+++|.+.   .++++
T Consensus       280 SkDG~IklwDGVS~rCv~t~~~AH~----------------gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~---t~R~l  340 (430)
T KOG0640|consen  280 SKDGAIKLWDGVSNRCVRTIGNAHG----------------GSEVCSAVFTKNGKYILSSGKDSTVKLWEIS---TGRML  340 (430)
T ss_pred             ccCCcEEeeccccHHHHHHHHhhcC----------------CceeeeEEEccCCeEEeecCCcceeeeeeec---CCceE
Confidence            9999999999999999988765444                2369999999999999999999999999999   88888


Q ss_pred             EEEeCCC-----CCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECCCc
Q psy8152         226 LKVDIPD-----VALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLDRH  298 (444)
Q Consensus       226 ~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~  298 (444)
                      ..+.+..     .--+...|+....|++.-. ..+.+.-||.++ ...+..+. +|++.+..+.-||.+.-+++++.|..
T Consensus       341 ~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRt-adr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~r  419 (430)
T KOG0640|consen  341 KEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDART-ADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFR  419 (430)
T ss_pred             EEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccc-hhhhhhcccCCCCCceEEEeCCCCCceeeecccce
Confidence            8877542     1234566887777877633 346799999999 76666655 89999999999999999999999999


Q ss_pred             EEEEEcC
Q psy8152         299 FRVHDFH  305 (444)
Q Consensus       299 i~vw~~~  305 (444)
                      +|+|--+
T Consensus       420 aRFWyrr  426 (430)
T KOG0640|consen  420 ARFWYRR  426 (430)
T ss_pred             eeeeeec
Confidence            9999643

>KOG0289|consensus

Probab=100.00  E-value=1.4e-30  Score=222.63  Aligned_cols=280  Identities=11%  Similarity=0.105  Sum_probs=237.9

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      ..|+++... +..+.+++|+.|..+.++|...++.+..+.  +|...|+.+  +++...+++++.|..|+||........
T Consensus       220 pgi~ald~~-~s~~~ilTGG~d~~av~~d~~s~q~l~~~~--Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~  296 (506)
T KOG0289|consen  220 PGITALDII-PSSSKILTGGEDKTAVLFDKPSNQILATLK--GHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEP  296 (506)
T ss_pred             CCeeEEeec-CCCCcceecCCCCceEEEecchhhhhhhcc--CcceEEEEEEeccchhheeecCCcceEEeeccccccCc
Confidence            467888888 557899999999999999999999999986  788888776  677888999999999999998877777


Q ss_pred             ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         121 WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       121 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      .....|..+|+.+..+|.|.||++++.|++..+.|++++.++........                ...+++++|||||.
T Consensus       297 ~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s----------------~v~~ts~~fHpDgL  360 (506)
T KOG0289|consen  297 TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETS----------------DVEYTSAAFHPDGL  360 (506)
T ss_pred             cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccc----------------cceeEEeeEcCCce
Confidence            67888999999999999999999999999999999999988766544222                23589999999999


Q ss_pred             EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCcee
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVK  279 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~  279 (444)
                      +|.+|..|+.|+|||+.   ....+..|.+|.++|..++|+.+|.+|++++.|+.|++||+|. .+...++.- ....|.
T Consensus       361 ifgtgt~d~~vkiwdlk---s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRK-l~n~kt~~l~~~~~v~  436 (506)
T KOG0289|consen  361 IFGTGTPDGVVKIWDLK---SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRK-LKNFKTIQLDEKKEVN  436 (506)
T ss_pred             EEeccCCCceEEEEEcC---CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehh-hcccceeeccccccce
Confidence            99999999999999999   6668888999999999999999999999999999999999999 777777763 234799


Q ss_pred             EEEecCCCCEEEEEECCCcEEEEEcCC--CceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         280 DIACPLNENLILSVSLDRHFRVHDFHS--KKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       280 ~~~~s~~~~~l~s~~~dg~i~vw~~~~--~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      ++.|.+.|.+|+.++.+=+|++++-.+  ..++..+. |.+..+++.|...         ..++++++.|..++++.+
T Consensus       437 s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~---------aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  437 SLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEH---------AQYLASTSMDAILRLYAL  505 (506)
T ss_pred             eEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeeccc---------ceEEeeccchhheEEeec
Confidence            999999999999998877777776444  34444443 6667778877644         378999999998887653

>KOG0294|consensus

Probab=100.00  E-value=2e-30  Score=213.18  Aligned_cols=268  Identities=10%  Similarity=0.129  Sum_probs=220.1

Q ss_pred             EEEEEEcCCeEEEEeCC----------CCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc
Q psy8152          57 ELLIAYSGQKIKIYDTD----------FKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV  126 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~----------~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  126 (444)
                      .|++|+....|.-+++.          +..+...|..+.|..++.+++-++.++++|+.|-+|+|||+.+...+..+..|
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~H   82 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSH   82 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceecc
Confidence            35666666666555543          22234456667999999999999999999999999999999999988889999


Q ss_pred             CCCeEEEEEeccC--CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE
Q psy8152         127 GPQLECMKHNKHS--NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV  204 (444)
Q Consensus       127 ~~~v~~~~~~~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  204 (444)
                      .+.|+++.|.+..  ..|++|+.||.|.+|+...-.++..++.|.+                  .|+.++.+|.+++.++
T Consensus        83 agsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~------------------~Vt~lsiHPS~KLALs  144 (362)
T KOG0294|consen   83 AGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKG------------------QVTDLSIHPSGKLALS  144 (362)
T ss_pred             ccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccccc------------------ccceeEecCCCceEEE
Confidence            9999999999854  4899999999999999999999999999998                  7999999999999999


Q ss_pred             EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152         205 CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       205 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s  284 (444)
                      .+.|+.+++|++-   .++.-+.+.... .-+.+.|+|.|.+++.+..++ |-+|.+.+ ......+.. ...+.++.|-
T Consensus       145 Vg~D~~lr~WNLV---~Gr~a~v~~L~~-~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~-A~v~~~i~~-~~r~l~~~~l  217 (362)
T KOG0294|consen  145 VGGDQVLRTWNLV---RGRVAFVLNLKN-KATLVSWSPQGDHFVVSGRNK-IDIYQLDN-ASVFREIEN-PKRILCATFL  217 (362)
T ss_pred             EcCCceeeeehhh---cCccceeeccCC-cceeeEEcCCCCEEEEEeccE-EEEEeccc-HhHhhhhhc-cccceeeeec
Confidence            9999999999998   444433333222 234599999999888887664 89999987 666655553 3456677774


Q ss_pred             CCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         285 LNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       285 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                       ++.+|++|+.++.|++||..+..++..+. |..+|..+.+-.+       |...+++|++.||.|++|++...
T Consensus       218 -~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~-------~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  218 -DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTN-------PEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             -CCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEec-------CCceEEEEeccCceEEEEEcccc
Confidence             66789999999999999999988877765 9999999986554       55689999999999999999865

>KOG0268|consensus

Probab=100.00  E-value=5.9e-32  Score=226.07  Aligned_cols=266  Identities=16%  Similarity=0.208  Sum_probs=219.0

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      ..+++|+.||.|+||++....+ .   ..+.  .|.+.|..|++.   ...+++++.|.+|+.|.+.. ....++.   .
T Consensus        80 s~~aSGs~DG~VkiWnlsqR~~-~---~~f~--AH~G~V~Gi~v~---~~~~~tvgdDKtvK~wk~~~-~p~~til---g  146 (433)
T KOG0268|consen   80 STVASGSCDGEVKIWNLSQREC-I---RTFK--AHEGLVRGICVT---QTSFFTVGDDKTVKQWKIDG-PPLHTIL---G  146 (433)
T ss_pred             hhhhccccCceEEEEehhhhhh-h---heee--cccCceeeEEec---ccceEEecCCcceeeeeccC-Ccceeee---c
Confidence            5689999999999999987765 2   2222  899999999998   38899999999999999874 4555542   2


Q ss_pred             cccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          87 EGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        87 ~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      ...+..++  ..+..+++++.  .|.|||.....++..+.-....|.++.|+| ...+|++++.|+.|.+||++++.++.
T Consensus       147 ~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~  224 (433)
T KOG0268|consen  147 KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLK  224 (433)
T ss_pred             cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccc
Confidence            45555663  34567777765  589999988888876777778899999999 67788899899999999999998887


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      .+.....                   -+.|+|+|..-.+++++.|..++.||++  ....++.....|.+.|..+.|||.
T Consensus       225 KVi~~mR-------------------TN~IswnPeafnF~~a~ED~nlY~~DmR--~l~~p~~v~~dhvsAV~dVdfspt  283 (433)
T KOG0268|consen  225 KVILTMR-------------------TNTICWNPEAFNFVAANEDHNLYTYDMR--NLSRPLNVHKDHVSAVMDVDFSPT  283 (433)
T ss_pred             eeeeecc-------------------ccceecCccccceeeccccccceehhhh--hhcccchhhcccceeEEEeccCCC
Confidence            6654333                   6789999988889999999999999999  566788888999999999999999


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      |+-+++|+.|.+|+||..+. +...-.+. .-...|.++.||.|.+++++||.|+.|++|.....+.
T Consensus       284 G~EfvsgsyDksIRIf~~~~-~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek  349 (433)
T KOG0268|consen  284 GQEFVSGSYDKSIRIFPVNH-GHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK  349 (433)
T ss_pred             cchhccccccceEEEeecCC-CcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence            99999999999999999987 54433332 1235789999999999999999999999998865443

>KOG0299|consensus

Probab=99.98  E-value=1.6e-30  Score=224.07  Aligned_cols=283  Identities=15%  Similarity=0.158  Sum_probs=234.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc----c----------eeec--cccccEE--EEEeCCCeEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT----N----------TDVS--FGEGDIV--GVSRYDECIL  101 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~----~----------~~~~--~~~~~v~--~~s~~~~~l~  101 (444)
                      .|.-+|+||+++ |+..++++++.+++|.-|++.+++...    .          ++.+  .|...++  ++++++++|+
T Consensus       140 ~H~~s~~~vals-~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyla  218 (479)
T KOG0299|consen  140 KHQLSVTSVALS-PDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLA  218 (479)
T ss_pred             cccCcceEEEee-ccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEE
Confidence            799999999999 799999999999999999998877431    1          0111  4545554  4589999999


Q ss_pred             EEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         102 TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       102 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      +|+.|..|.||+..+.+.++.+.+|.+.|.+++|-.....|++++.|+.|++|++.....+.++.+|+.           
T Consensus       219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd-----------  287 (479)
T KOG0299|consen  219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQD-----------  287 (479)
T ss_pred             ecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCcc-----------
Confidence            999999999999999999988899999999999999888999999999999999999888888888888           


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEc
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDL  261 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  261 (444)
                             .|.+|.....++.+-+|+.|+++++|++.   . .....+.++...+-|++|-.+ ..+++|+.+|.|.+|++
T Consensus       288 -------~v~~IdaL~reR~vtVGgrDrT~rlwKi~---e-esqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~  355 (479)
T KOG0299|consen  288 -------GVLGIDALSRERCVTVGGRDRTVRLWKIP---E-ESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSL  355 (479)
T ss_pred             -------ceeeechhcccceEEeccccceeEEEecc---c-cceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeee
Confidence                   78888888777888888899999999997   2 223346788889999999854 57899999999999999


Q ss_pred             CCCCcceeEec-cc-----------cCceeEEEecCCCCEEEEEECCCcEEEEEcCCC----ceEEEeecCCceeEEEEc
Q psy8152         262 RGKGKPCYKYK-GF-----------AGCVKDIACPLNENLILSVSLDRHFRVHDFHSK----KLLRKDYMQSRLTSILVR  325 (444)
Q Consensus       262 ~~~~~~~~~~~-~h-----------~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~----~~~~~~~~~~~i~~~~~~  325 (444)
                      .+ .+++.+.+ +|           ...|++++..|...++++|+.+|.|++|.+..+    .++..+...+-|++++|.
T Consensus       356 ~K-Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~  434 (479)
T KOG0299|consen  356 LK-KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFS  434 (479)
T ss_pred             cc-cCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEc
Confidence            99 88888766 23           127899999999999999999999999999886    455666688899999987


Q ss_pred             CCCcccccchhhhhccccccCCCccccCCC
Q psy8152         326 SDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       326 ~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .+-.        ..++..+....+--|-..
T Consensus       435 ~sgk--------~ivagiGkEhRlGRW~~~  456 (479)
T KOG0299|consen  435 NSGK--------RIVAGIGKEHRLGRWWCL  456 (479)
T ss_pred             cCCC--------EEEEecccccccceeeEe
Confidence            6522        245555566556556443

>KOG0308|consensus

Probab=99.98  E-value=2.2e-31  Score=238.42  Aligned_cols=293  Identities=14%  Similarity=0.169  Sum_probs=233.5

Q ss_pred             CcccceE---EEeeeccCCcEEEEEEcCCeEEEEeCCCCcc------ccceeeccccccEEEE--EeCCCeEEEEecCCc
Q psy8152          40 TNKASVL---ALNWGNVEESELLIAYSGQKIKIYDTDFKNF------NTNTDVSFGEGDIVGV--SRYDECILTAVKSGD  108 (444)
Q Consensus        40 ~h~~~v~---~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~------~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~  108 (444)
                      .|...|.   .+..+.|.+++|++|+.||.|++|++....-      ...+  ..|..+|..+  .-+++.|++++.|-+
T Consensus        19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asm--e~HsDWVNDiiL~~~~~tlIS~SsDtT   96 (735)
T KOG0308|consen   19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASM--EHHSDWVNDIILCGNGKTLISASSDTT   96 (735)
T ss_pred             hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhh--hhhHhHHhhHHhhcCCCceEEecCCce
Confidence            4555565   6667767888999999999999999864322      3333  4778888776  567889999999999


Q ss_pred             EEEEEcCCC--CccccccccCCCeEEEEE-eccCCEEEEeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCccc
Q psy8152         109 VKLWRYKTE--PDQWTNFNVGPQLECMKH-NKHSNIIATGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       109 i~iw~~~~~--~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      |++|+...+  -+..++..|...|.|+++ .++..++|+||-|+.|.+||++++.  .+.++.....         .++.
T Consensus        97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~---------~sl~  167 (735)
T KOG0308|consen   97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV---------NSLG  167 (735)
T ss_pred             EEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc---------ccCC
Confidence            999998877  566677889999999999 6688999999999999999999873  2322221111         0111


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      ......|++++.++.|..|++|+..+.|++||.+   .++.+..+.+|...|..+..+++|..+++++.||+|++||+..
T Consensus       168 sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDpr---t~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq  244 (735)
T KOG0308|consen  168 SGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPR---TCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ  244 (735)
T ss_pred             CCCccceeeeecCCcceEEEecCcccceEEeccc---cccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence            1234479999999999999999999999999999   8899999999999999999999999999999999999999999


Q ss_pred             CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC-CceEEEeecCCceeEEEEcCCCcccccchhhhhccc
Q psy8152         264 KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS-KKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHS  342 (444)
Q Consensus       264 ~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s  342 (444)
                       .++++++..|...|.++..+|+-.++++|+.||.|..=++.+ .++...+....+|..+..+..-         ..+-.
T Consensus       245 -QrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~---------~~~Wv  314 (735)
T KOG0308|consen  245 -QRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHD---------NSVWV  314 (735)
T ss_pred             -cceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhcccc---------CCcee
Confidence             999999999999999999999999999999999999999988 4444444455666666554221         11233


Q ss_pred             cccCCCccccCCCc
Q psy8152         343 EEKGDSDEKYDPEH  356 (444)
Q Consensus       343 ~~~d~~i~~W~~~~  356 (444)
                      +..|+.|+-|....
T Consensus       315 tTtds~I~rW~~~~  328 (735)
T KOG0308|consen  315 TTTDSSIKRWKLEP  328 (735)
T ss_pred             eeccccceecCCcc
Confidence            45677777776653

>KOG0305|consensus

Probab=99.98  E-value=1.6e-30  Score=234.30  Aligned_cols=272  Identities=15%  Similarity=0.216  Sum_probs=233.4

Q ss_pred             EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccccc
Q psy8152          47 ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNF  124 (444)
Q Consensus        47 ~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  124 (444)
                      -+.|+  ..+.|++|.. ..|++|+..++.........  ...|+++  +++|.+|++|..+|.|.|||....+.+..+.
T Consensus       182 lldWs--s~n~laValg-~~vylW~~~s~~v~~l~~~~--~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~  256 (484)
T KOG0305|consen  182 LLDWS--SANVLAVALG-QSVYLWSASSGSVTELCSFG--EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLR  256 (484)
T ss_pred             Hhhcc--cCCeEEEEec-ceEEEEecCCCceEEeEecC--CCceEEEEECCCCCEEEEeecCCeEEEEehhhcccccccc
Confidence            34566  3567777765 68999999999877766543  5666666  5789999999999999999999988888777


Q ss_pred             c-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152         125 N-VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV  202 (444)
Q Consensus       125 ~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  202 (444)
                      . |...|.+++|+  +..+.+|+.++.|..+|++..+.... +.+|..                  .|..+.|++++++|
T Consensus       257 ~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~q------------------eVCgLkws~d~~~l  316 (484)
T KOG0305|consen  257 GSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQ------------------EVCGLKWSPDGNQL  316 (484)
T ss_pred             CCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccc------------------eeeeeEECCCCCee
Confidence            7 99999999997  77899999999999999999766555 666776                  79999999999999


Q ss_pred             EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEE--EcCCCcEEEEEcCCCCcceeEeccccCcee
Q psy8152         203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIV--GSTTGDMMAVDLRGKGKPCYKYKGFAGCVK  279 (444)
Q Consensus       203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~  279 (444)
                      |+|+.|+.+.|||..   ...+.+.+..|...|.+++|+|- ..+||+  |+.|+.|++||..+ ++.+..+.. .+.|+
T Consensus       317 ASGgnDN~~~Iwd~~---~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~-g~~i~~vdt-gsQVc  391 (484)
T KOG0305|consen  317 ASGGNDNVVFIWDGL---SPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNT-GARIDSVDT-GSQVC  391 (484)
T ss_pred             ccCCCccceEeccCC---CccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCC-CcEeccccc-CCcee
Confidence            999999999999998   88899999999999999999994 668888  56799999999999 999888863 57899


Q ss_pred             EEEecCCCCEEEEE--ECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         280 DIACPLNENLILSV--SLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       280 ~~~~s~~~~~l~s~--~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      .|.|++..+-|+++  -.+..|.||+..+.+++..+. |..+|..++++|+         +..+++++.|.++++|++-.
T Consensus       392 sL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPd---------g~~i~t~a~DETlrfw~~f~  462 (484)
T KOG0305|consen  392 SLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPD---------GETIVTGAADETLRFWNLFD  462 (484)
T ss_pred             eEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCC---------CCEEEEecccCcEEeccccC
Confidence            99999988766554  356789999999988887765 9999999998855         68899999999999999886


Q ss_pred             c
Q psy8152         357 F  357 (444)
Q Consensus       357 ~  357 (444)
                      .
T Consensus       463 ~  463 (484)
T KOG0305|consen  463 E  463 (484)
T ss_pred             C
Confidence            5

>KOG0289|consensus

Probab=99.98  E-value=3.7e-30  Score=220.15  Aligned_cols=269  Identities=13%  Similarity=0.212  Sum_probs=228.8

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ...+++|+.|..+.+++...++.    +..+.  +|...|+.+.|+ ++...+++++.|..|+||............  .
T Consensus       231 ~~~ilTGG~d~~av~~d~~s~q~----l~~~~--Gh~kki~~v~~~-~~~~~v~~aSad~~i~vws~~~~s~~~~~~--~  301 (506)
T KOG0289|consen  231 SSKILTGGEDKTAVLFDKPSNQI----LATLK--GHTKKITSVKFH-KDLDTVITASADEIIRVWSVPLSSEPTSSR--P  301 (506)
T ss_pred             CCcceecCCCCceEEEecchhhh----hhhcc--CcceEEEEEEec-cchhheeecCCcceEEeeccccccCccccc--c
Confidence            47899999999999999888774    22233  999999999999 799999999999999999988777666554  6


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      |..+|+.+  +|.|.||++++.|++..+.+++++.++.....  ..-.+++++|+|+|.+|.+|..|+.|+|||+..+..
T Consensus       302 h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~  381 (506)
T KOG0289|consen  302 HEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTN  381 (506)
T ss_pred             ccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccc
Confidence            67888766  68999999999999999999999988742222  123489999999999999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-CCCeeEEEE
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-DVALSCITT  240 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~  240 (444)
                      +..+.+|..                  +|..++|+.+|.+|++++.|+.|++||+|   +.+...++... ...+.++.|
T Consensus       382 ~a~Fpght~------------------~vk~i~FsENGY~Lat~add~~V~lwDLR---Kl~n~kt~~l~~~~~v~s~~f  440 (506)
T KOG0289|consen  382 VAKFPGHTG------------------PVKAISFSENGYWLATAADDGSVKLWDLR---KLKNFKTIQLDEKKEVNSLSF  440 (506)
T ss_pred             cccCCCCCC------------------ceeEEEeccCceEEEEEecCCeEEEEEeh---hhcccceeeccccccceeEEE
Confidence            999999888                  89999999999999999999999999999   66666665533 347999999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCC-CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRG-KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+.|.+|+.++.+=.|++++-.+ ....+..+..|.+..+++.|....+++++++.|..++++.+
T Consensus       441 D~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  441 DQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             cCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            99999999998876666666332 15677788889999999999999999999999999998865

>KOG1274|consensus

Probab=99.98  E-value=2.1e-29  Score=234.35  Aligned_cols=260  Identities=12%  Similarity=0.161  Sum_probs=223.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .|...-+.|+|. +++.+|++++.||.|++|+.... +....+.  -+...|.+++-.+.+|++|+.+++|.+|.+..++
T Consensus        11 aht~G~t~i~~d-~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~--~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~   87 (933)
T KOG1274|consen   11 AHTGGLTLICYD-PDGEFICTCGSDGDIRKWKTNSDEEEPETID--ISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGE   87 (933)
T ss_pred             hccCceEEEEEc-CCCCEEEEecCCCceEEeecCCcccCCchhh--ccCceeEEEeecccceEEeeccceEEEeeCCCCC
Confidence            788999999999 79999999999999999997655 4444442  2678889998888899999999999999999988


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      .-..+....-++.+++|+.+|+++|.|+.|-.|++.++........+++|..                  +|.++.|+|.
T Consensus        88 ~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~a------------------pVl~l~~~p~  149 (933)
T KOG1274|consen   88 EDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDA------------------PVLQLSYDPK  149 (933)
T ss_pred             ccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCC------------------ceeeeeEcCC
Confidence            7766777889999999999999999999999999999999999999999988                  8999999999


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEEEeC-------C-CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-------P-DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      +++||+.+.||.|++|++.   .+....++.+       . ...+..++|+|++..+++.+.++.|++|+... ..+...
T Consensus       150 ~~fLAvss~dG~v~iw~~~---~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~-we~~f~  225 (933)
T KOG1274|consen  150 GNFLAVSSCDGKVQIWDLQ---DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKG-WELQFK  225 (933)
T ss_pred             CCEEEEEecCceEEEEEcc---cchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCC-ceehee
Confidence            9999999999999999999   5555444432       1 44577899999988888888999999999998 888888


Q ss_pred             ecc--ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         271 YKG--FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       271 ~~~--h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      +..  +...++.++|+|+|+|||+++.+|.|.|||..+-   .+-.....|.+++|.+.
T Consensus       226 Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~---~~~~~~~~Vc~~aw~p~  281 (933)
T KOG1274|consen  226 LRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTH---ERHEFKRAVCCEAWKPN  281 (933)
T ss_pred             ecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccc---hhccccceeEEEecCCC
Confidence            873  4455999999999999999999999999999972   22234566888888765

>KOG0264|consensus

Probab=99.97  E-value=2.8e-30  Score=222.52  Aligned_cols=253  Identities=17%  Similarity=0.205  Sum_probs=208.2

Q ss_pred             eeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--------ccccceeeccccccEEEEEeC---CCeEE
Q psy8152          33 IQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--------NFNTNTDVSFGEGDIVGVSRY---DECIL  101 (444)
Q Consensus        33 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--------~~~~~~~~~~~~~~v~~~s~~---~~~l~  101 (444)
                      ++..+.+.|.+.|+.+.+.|.+...+++.+..+.|+|||..+.        ++...+.+.+|...-.+++++   ...|+
T Consensus       115 v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Ll  194 (422)
T KOG0264|consen  115 VEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLL  194 (422)
T ss_pred             eEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEe
Confidence            4444455899999999999877888888999999999997642        233334556776655555543   45799


Q ss_pred             EEecCCcEEEEEcCCCCc-------cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcC--Cceeeeeeecccce
Q psy8152         102 TAVKSGDVKLWRYKTEPD-------QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLN--TTKNIFSAKNVSHR  171 (444)
Q Consensus       102 ~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~  171 (444)
                      +++.|++|++||+.....       ...+.+|...|..++|++ +..+|++++.|+.+.|||++  +.++....+.|.. 
T Consensus       195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~-  273 (422)
T KOG0264|consen  195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSA-  273 (422)
T ss_pred             eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCC-
Confidence            999999999999875433       225677999999999999 88899999999999999999  5566666677766 


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIV  249 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~  249 (444)
                                       .|+|++|+|.+ ..||+|+.|++|++||+|  ...++++++.+|...|.+|.|+|. ...||+
T Consensus       274 -----------------~vn~~~fnp~~~~ilAT~S~D~tV~LwDlR--nL~~~lh~~e~H~dev~~V~WSPh~etvLAS  334 (422)
T KOG0264|consen  274 -----------------EVNCVAFNPFNEFILATGSADKTVALWDLR--NLNKPLHTFEGHEDEVFQVEWSPHNETVLAS  334 (422)
T ss_pred             -----------------ceeEEEeCCCCCceEEeccCCCcEEEeech--hcccCceeccCCCcceEEEEeCCCCCceeEe
Confidence                             89999999977 788999999999999999  566789999999999999999997 567888


Q ss_pred             EcCCCcEEEEEcCC-------------CCcceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcC
Q psy8152         250 GSTTGDMMAVDLRG-------------KGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFH  305 (444)
Q Consensus       250 ~~~dg~i~iwd~~~-------------~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~  305 (444)
                      ++.|+.+.|||+..             +..++..-.||...|..+.|+|+.. .|+|++.|+.+.||...
T Consensus       335 Sg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  335 SGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             cccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            99999999999975             2234556669999999999999886 67788999999999975

>KOG0647|consensus

Probab=99.97  E-value=9.2e-30  Score=208.13  Aligned_cols=263  Identities=14%  Similarity=0.184  Sum_probs=209.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      ...+.|.+|+|||....+|+++|.|++||+|+++. |..... ....|..+++++.  -+|..+++|+.|+.+++||+.+
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~k-a~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S  103 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPK-AQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS  103 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccch-hhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence            45789999999954667777999999999999986 344432 2347788988764  5789999999999999999999


Q ss_pred             CCccccccccCCCeEEEEEeccCC--EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHSN--IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ++.. ....|.++|.++.|-+...  .|++|+.|++|++||++...++.++.....                   ++++.
T Consensus       104 ~Q~~-~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR-------------------vYa~D  163 (347)
T KOG0647|consen  104 GQVS-QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER-------------------VYAAD  163 (347)
T ss_pred             CCee-eeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce-------------------eeehh
Confidence            9777 4888999999999988444  899999999999999999999988876655                   77776


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC--cceeEec
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG--KPCYKYK  272 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~  272 (444)
                      .-.  .+++++..++.|.+|+++. ........-..-...+.||+..++....+.|+..|.+.|..+.. +  +.-.+|+
T Consensus       164 v~~--pm~vVata~r~i~vynL~n-~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~-~~~~~nFtFk  239 (347)
T KOG0647|consen  164 VLY--PMAVVATAERHIAVYNLEN-PPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDD-PNPKDNFTFK  239 (347)
T ss_pred             ccC--ceeEEEecCCcEEEEEcCC-CcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCC-CCccCceeEE
Confidence            633  6788899999999999971 11111111112345688999999888889999999999998887 5  4445666


Q ss_pred             cccC---------ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe-ecCCceeEEEEcCC
Q psy8152         273 GFAG---------CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD-YMQSRLTSILVRSD  327 (444)
Q Consensus       273 ~h~~---------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-~~~~~i~~~~~~~~  327 (444)
                      .|..         .|++|+|+|....|++++.||++.+||-.....+... .|..+|++..|+.+
T Consensus       240 CHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~  304 (347)
T KOG0647|consen  240 CHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRN  304 (347)
T ss_pred             EeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCC
Confidence            6752         5788999999999999999999999999887666653 47888888887754

>KOG0641|consensus

Probab=99.97  E-value=1.8e-28  Score=192.63  Aligned_cols=286  Identities=13%  Similarity=0.175  Sum_probs=222.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCC------Cccc---eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSK------DKCI---IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF   74 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~------~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~   74 (444)
                      +.+...++|+...+++|.....      ....   ...........|.+.|+|.+|+ |.+.+|++|+.|.+|++..+..
T Consensus        42 p~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws-~~geliatgsndk~ik~l~fn~  120 (350)
T KOG0641|consen   42 PAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWS-PCGELIATGSNDKTIKVLPFNA  120 (350)
T ss_pred             CCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEec-CccCeEEecCCCceEEEEeccc
Confidence            4567889999999999875421      1110   1111111222789999999999 7999999999999999987654


Q ss_pred             Cccc---cceeeccccccEEEEEe------CCCeEEEEe-cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEE
Q psy8152          75 KNFN---TNTDVSFGEGDIVGVSR------YDECILTAV-KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        75 ~~~~---~~~~~~~~~~~v~~~s~------~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  144 (444)
                      ..+.   ..+....|.+.|..+.+      .+.+|++++ .|..|++-|..+++....+.+|.+.|.++- +-++-++++
T Consensus       121 dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~s  199 (350)
T KOG0641|consen  121 DTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFAS  199 (350)
T ss_pred             ccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEc
Confidence            3332   23344567788876642      245677654 477888889899998888999999998873 226889999


Q ss_pred             eeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152         145 GGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP  224 (444)
Q Consensus       145 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  224 (444)
                      |+.|.+|++||++-..++.++....+        ..++   ....|.+++..|.|++|++|-.|....+||++   .+++
T Consensus       200 gsqdktirfwdlrv~~~v~~l~~~~~--------~~gl---essavaav~vdpsgrll~sg~~dssc~lydir---g~r~  265 (350)
T KOG0641|consen  200 GSQDKTIRFWDLRVNSCVNTLDNDFH--------DGGL---ESSAVAAVAVDPSGRLLASGHADSSCMLYDIR---GGRM  265 (350)
T ss_pred             cCCCceEEEEeeeccceeeeccCccc--------CCCc---ccceeEEEEECCCcceeeeccCCCceEEEEee---CCce
Confidence            99999999999998888876643322        0010   11259999999999999999999999999999   8999


Q ss_pred             eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC---CcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         225 VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK---GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       225 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                      ++.+..|...|.++.|+|...|+++++.|..|++-|+...   .-++..+..|+..+..+.|+|..--+++.+.|.++.+
T Consensus       266 iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tl  345 (350)
T KOG0641|consen  266 IQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATL  345 (350)
T ss_pred             eeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEE
Confidence            9999999999999999999999999999999999998730   1123334469999999999999988999999999999


Q ss_pred             EEcC
Q psy8152         302 HDFH  305 (444)
Q Consensus       302 w~~~  305 (444)
                      |-+.
T Consensus       346 wa~~  349 (350)
T KOG0641|consen  346 WALN  349 (350)
T ss_pred             eccC
Confidence            9764

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.4e-28  Score=230.08  Aligned_cols=279  Identities=11%  Similarity=0.083  Sum_probs=204.0

Q ss_pred             cccEEEecCCCcEEEEEcCCCccce---------eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCII---------KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN   76 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~   76 (444)
                      ...+++++.+.....|+...+....         .....+  .+|.+.|++++|+|.++++|++|+.|++|++|++.++.
T Consensus        32 ~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l--~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~  109 (493)
T PTZ00421         32 CSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPIL--LGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEG  109 (493)
T ss_pred             CCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceE--eCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCc
Confidence            3556677777777777654433210         001112  28999999999994378899999999999999997653


Q ss_pred             cc-----cceeeccccccEEEE--EeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC
Q psy8152          77 FN-----TNTDVSFGEGDIVGV--SRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE  148 (444)
Q Consensus        77 ~~-----~~~~~~~~~~~v~~~--s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  148 (444)
                      ..     ....+.+|...|.++  +|.+ ++|++++.|++|+|||+.+++.+..+..|...|.+++|+|++.+|++++.|
T Consensus       110 ~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D  189 (493)
T PTZ00421        110 LTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD  189 (493)
T ss_pred             cccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence            21     112334777777665  5654 689999999999999999998887777899999999999999999999999


Q ss_pred             CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe----CCceEEEEEcCCCCCccc
Q psy8152         149 NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS----KQGYVRVYDPKITTQRRP  224 (444)
Q Consensus       149 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~  224 (444)
                      +.|++||+++++.+..+..|..                 ..+..+.|.+++..|++++    .|+.|++||++  ....+
T Consensus       190 g~IrIwD~rsg~~v~tl~~H~~-----------------~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr--~~~~p  250 (493)
T PTZ00421        190 KKLNIIDPRDGTIVSSVEAHAS-----------------AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR--KMASP  250 (493)
T ss_pred             CEEEEEECCCCcEEEEEecCCC-----------------CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC--CCCCc
Confidence            9999999999998888877765                 1245677888887777654    47899999998  22234


Q ss_pred             eEEEeCC-CCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         225 VLKVDIP-DVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       225 ~~~~~~~-~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                      +.....+ ...+....|++++++|++++ .|+.|++||+.+ ++++..+.. +..++..++|.|....  -...--..|+
T Consensus       251 ~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~-~~~~~~~~~~s~~~~~g~~~~pk~~~--dv~~~Ei~r~  327 (493)
T PTZ00421        251 YSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN-ERLTFCSSYSSVEPHKGLCMMPKWSL--DTRKCEIARF  327 (493)
T ss_pred             eeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC-CceEEEeeccCCCCCcceEecccccc--cccceeeeEE
Confidence            4433333 33455667899999999877 599999999999 887776653 4567888999885321  1122233577


Q ss_pred             EEcCCCc
Q psy8152         302 HDFHSKK  308 (444)
Q Consensus       302 w~~~~~~  308 (444)
                      |.+....
T Consensus       328 ~~l~~~~  334 (493)
T PTZ00421        328 YALTYHS  334 (493)
T ss_pred             EEecCCe
Confidence            7776543

>KOG0641|consensus

Probab=99.97  E-value=5.1e-28  Score=190.11  Aligned_cols=292  Identities=11%  Similarity=0.162  Sum_probs=226.6

Q ss_pred             eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC------C----ccc---cceeeccccccEEE--EEe
Q psy8152          31 KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF------K----NFN---TNTDVSFGEGDIVG--VSR   95 (444)
Q Consensus        31 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~------~----~~~---~~~~~~~~~~~v~~--~s~   95 (444)
                      +.+..+..+.....|.+++|+ |.+.+.++|+...+++|.-...      +    +..   ...+...|.+.|.+  ++|
T Consensus        21 ~~f~~i~~l~dsqairav~fh-p~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~   99 (350)
T KOG0641|consen   21 KHFEAINILEDSQAIRAVAFH-PAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP   99 (350)
T ss_pred             cceEEEEEecchhheeeEEec-CCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence            445556666778899999999 7999999999999999875321      1    111   11112345666654  588


Q ss_pred             CCCeEEEEecCCcEEEEEcCCCCccc-----cccccCCCeEEEEEec----cCCEEEEeeC-CCeEEEEEcCCceeeeee
Q psy8152          96 YDECILTAVKSGDVKLWRYKTEPDQW-----TNFNVGPQLECMKHNK----HSNIIATGGK-ENDLKLWDLNTTKNIFSA  165 (444)
Q Consensus        96 ~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~vwd~~~~~~~~~~  165 (444)
                      .|.+|++|+.|.+|++..+....+..     .+.-|.+.|..++|..    .+.+|++++. |..|++-|..+++..+.+
T Consensus       100 ~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~  179 (350)
T KOG0641|consen  100 CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHAL  179 (350)
T ss_pred             ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceee
Confidence            99999999999999998766443321     3556899999999965    4567777664 667888888899999999


Q ss_pred             ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC--C-----CCCeeEE
Q psy8152         166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI--P-----DVALSCI  238 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~-----~~~i~~~  238 (444)
                      .+|.+                  .|.++ ++-++-++++|+.|.+|++||++   -..++.++..  |     ...|.++
T Consensus       180 sghtg------------------hilal-yswn~~m~~sgsqdktirfwdlr---v~~~v~~l~~~~~~~glessavaav  237 (350)
T KOG0641|consen  180 SGHTG------------------HILAL-YSWNGAMFASGSQDKTIRFWDLR---VNSCVNTLDNDFHDGGLESSAVAAV  237 (350)
T ss_pred             cCCcc------------------cEEEE-EEecCcEEEccCCCceEEEEeee---ccceeeeccCcccCCCcccceeEEE
Confidence            98887                  56554 33457899999999999999999   6666665432  1     3578999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC---c--eEEEe
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK---K--LLRKD  313 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~---~--~~~~~  313 (444)
                      +..|.|++|++|-.|....+||++. +++++.+..|...|.++.|+|...||++++.|..|++=|+...   +  .+..-
T Consensus       238 ~vdpsgrll~sg~~dssc~lydirg-~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~  316 (350)
T KOG0641|consen  238 AVDPSGRLLASGHADSSCMLYDIRG-GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVA  316 (350)
T ss_pred             EECCCcceeeeccCCCceEEEEeeC-CceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEE
Confidence            9999999999999999999999999 9999999999999999999999999999999999999998752   1  11222


Q ss_pred             ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         314 YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       314 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .|+..+-.+.|.+.         .-..++.+.|.++.+|.+.
T Consensus       317 ehkdk~i~~rwh~~---------d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  317 EHKDKAIQCRWHPQ---------DFSFISSSADKTATLWALN  349 (350)
T ss_pred             eccCceEEEEecCc---------cceeeeccCcceEEEeccC
Confidence            37777666666643         3347788999999999764

>KOG0300|consensus

Probab=99.97  E-value=7.4e-30  Score=210.14  Aligned_cols=286  Identities=12%  Similarity=0.111  Sum_probs=242.2

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC--
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK--  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~--  115 (444)
                      +|+..|+.++.. .....+.+++.|.+.+||.++++.|+..+.  +|.+.|.++  ++.+.++++++.|++.+||...  
T Consensus       146 GHkDGiW~Vaa~-~tqpi~gtASADhTA~iWs~Esg~CL~~Y~--GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~  222 (481)
T KOG0300|consen  146 GHKDGIWHVAAD-STQPICGTASADHTARIWSLESGACLATYT--GHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVN  222 (481)
T ss_pred             ccccceeeehhh-cCCcceeecccccceeEEeeccccceeeec--ccccceeeEEeccccceEEEccCCcchHHHHHhhc
Confidence            999999999988 567788899999999999999999999987  677777665  6788999999999999999721  


Q ss_pred             ----C------------------------------C----CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152         116 ----T------------------------------E----PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus       116 ----~------------------------------~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                          .                              +    .++..+.+|.+.|.+..|...++.+++++.|.+..+||+.
T Consensus       223 ~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVE  302 (481)
T KOG0300|consen  223 WEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVE  302 (481)
T ss_pred             CcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeec
Confidence                1                              0    0122456788999999999999999999999999999999


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      ++.++..+.+|.+                  ..+.++-+|..+++++.+.|.+.++||.+  .....+..|++|...|++
T Consensus       303 tge~v~~LtGHd~------------------ELtHcstHptQrLVvTsSrDtTFRLWDFR--eaI~sV~VFQGHtdtVTS  362 (481)
T KOG0300|consen  303 TGEVVNILTGHDS------------------ELTHCSTHPTQRLVVTSSRDTTFRLWDFR--EAIQSVAVFQGHTDTVTS  362 (481)
T ss_pred             cCceeccccCcch------------------hccccccCCcceEEEEeccCceeEeccch--hhcceeeeecccccceeE
Confidence            9999999999998                  78889999999999999999999999999  556677889999999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE-----E
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR-----K  312 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~-----~  312 (444)
                      +.|..+. .+++|+.|.+|+|||+++...++.++. -.++++.++.+..++.|+.--.+..|++||+...++..     +
T Consensus       363 ~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsR  440 (481)
T KOG0300|consen  363 VVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSR  440 (481)
T ss_pred             EEEecCC-ceeecCCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccc
Confidence            9998764 688999999999999999778888887 46789999999888888888888999999998655422     1


Q ss_pred             eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         313 DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                      ..|..-|.|.+|...       +.-.-|.+++-|..+.-|.+..+
T Consensus       441 qgHrRMV~c~AW~ee-------hp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  441 QGHRRMVTCCAWLEE-------HPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             cccceeeeeeecccc-------CcccccccccccceeeeeEeccc
Confidence            236666888887655       22255889999999999987754

>KOG1446|consensus

Probab=99.97  E-value=1.4e-28  Score=202.89  Aligned_cols=270  Identities=14%  Similarity=0.138  Sum_probs=215.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc--CCeEEEEeCCCCccccce
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS--GQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~   81 (444)
                      .++..+++++.|..|+||+..++++ .   ..+.  .++-.|..++|. ...+.++.++.  |.+|+..++.+.+.++.|
T Consensus        24 ~~G~~litss~dDsl~LYd~~~g~~-~---~ti~--skkyG~~~~~Ft-h~~~~~i~sStk~d~tIryLsl~dNkylRYF   96 (311)
T KOG1446|consen   24 DDGLLLITSSEDDSLRLYDSLSGKQ-V---KTIN--SKKYGVDLACFT-HHSNTVIHSSTKEDDTIRYLSLHDNKYLRYF   96 (311)
T ss_pred             CCCCEEEEecCCCeEEEEEcCCCce-e---eEee--cccccccEEEEe-cCCceEEEccCCCCCceEEEEeecCceEEEc
Confidence            4567888889999999999998885 2   2222  456678888998 45666666665  889999999999999999


Q ss_pred             eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-
Q psy8152          82 DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-  158 (444)
Q Consensus        82 ~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-  158 (444)
                      .  +|...|.++  +|-+..+++++.|++|++||++..++...+  +...-..++|.|.|-++|++...+.|++||++. 
T Consensus        97 ~--GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l--~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~  172 (311)
T KOG1446|consen   97 P--GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL--NLSGRPIAAFDPEGLIFALANGSELIKLYDLRSF  172 (311)
T ss_pred             C--CCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE--ecCCCcceeECCCCcEEEEecCCCeEEEEEeccc
Confidence            6  888888776  688899999999999999999988887522  233344678999999999999888999999997 


Q ss_pred             -ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCe--
Q psy8152         159 -TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVAL--  235 (444)
Q Consensus       159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i--  235 (444)
                       ..+..++.....               .....+.|.|+|+|++|+.++..+.+++.|.-   .+....++..+...-  
T Consensus       173 dkgPF~tf~i~~~---------------~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf---~G~~~~tfs~~~~~~~~  234 (311)
T KOG1446|consen  173 DKGPFTTFSITDN---------------DEAEWTDLEFSPDGKSILLSTNASFIYLLDAF---DGTVKSTFSGYPNAGNL  234 (311)
T ss_pred             CCCCceeEccCCC---------------CccceeeeEEcCCCCEEEEEeCCCcEEEEEcc---CCcEeeeEeeccCCCCc
Confidence             233333332211               01258899999999999999999999999988   666666666554322  


Q ss_pred             -eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         236 -SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       236 -~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                       -..+|+|+++++++|+.||+|.+|++++ +..+..+.+ +.+++.++.|+|.-..++++  +..+.+|=..
T Consensus       235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~t-g~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~  303 (311)
T KOG1446|consen  235 PLSATFTPDSKFVLSGSDDGTIHVWNLET-GKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPD  303 (311)
T ss_pred             ceeEEECCCCcEEEEecCCCcEEEEEcCC-CcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEecc
Confidence             4678999999999999999999999999 999999998 78999999999987666665  4567788554

>KOG0973|consensus

Probab=99.97  E-value=7.3e-30  Score=241.98  Aligned_cols=284  Identities=13%  Similarity=0.135  Sum_probs=226.6

Q ss_pred             CCCcccEEEec--CCCcEEEEEcCCCcc--------ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeC
Q psy8152           3 LADDYNIYIGS--STGAFKGVNLSKDKC--------IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDT   72 (444)
Q Consensus         3 ~~~~~~l~~g~--~dg~i~i~~~~~~~~--------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~   72 (444)
                      .+++..+++|+  .||.+.||+...--.        ..+.+..+.  .|.+.|+|+.|+ +++.+||+|+.|+.|.||..
T Consensus        22 ~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~--~h~~sv~CVR~S-~dG~~lAsGSDD~~v~iW~~   98 (942)
T KOG0973|consen   22 HPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMD--DHDGSVNCVRFS-PDGSYLASGSDDRLVMIWER   98 (942)
T ss_pred             cCCceeEecCCccccccceeeccccccchhhhhhcccchhheeec--cccCceeEEEEC-CCCCeEeeccCcceEEEeee
Confidence            35677899999  899999998743211        011111112  899999999999 89999999999999999997


Q ss_pred             CC----C--------------ccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEE
Q psy8152          73 DF----K--------------NFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLEC  132 (444)
Q Consensus        73 ~~----~--------------~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~  132 (444)
                      ..    .              ++...  +.+|...|..+  +|++.+|++++.|++|.||+..+.+.+..+.+|...|..
T Consensus        99 ~~~~~~~~fgs~g~~~~vE~wk~~~~--l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKG  176 (942)
T KOG0973|consen   99 AEIGSGTVFGSTGGAKNVESWKVVSI--LRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKG  176 (942)
T ss_pred             cccCCcccccccccccccceeeEEEE--EecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccc
Confidence            62    0              12223  34778888765  788999999999999999999999999889999999999


Q ss_pred             EEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----C
Q psy8152         133 MKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----Q  208 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d  208 (444)
                      +.|.|-|++||+-+.|++|+||.+..-...+.+..+-...            .....++.+.|+|||++|++...    -
T Consensus       177 vs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~------------~~~T~f~RlSWSPDG~~las~nA~n~~~  244 (942)
T KOG0973|consen  177 VSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEES------------PLTTFFLRLSWSPDGHHLASPNAVNGGK  244 (942)
T ss_pred             eEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhC------------CCcceeeecccCCCcCeecchhhccCCc
Confidence            9999999999999999999999987754544443332200            11224889999999999997632    4


Q ss_pred             ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-----CC------------EEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         209 GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-----SH------------YVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       209 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~------------~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      .++.|.+..   ..+.-..|-+|..++.+++|+|.     .+            .+|+|+.|++|.||.... .+|+...
T Consensus       245 ~~~~IieR~---tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~-~RPl~vi  320 (942)
T KOG0973|consen  245 STIAIIERG---TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL-PRPLFVI  320 (942)
T ss_pred             ceeEEEecC---CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC-CCchhhh
Confidence            478888877   78888889999999999999982     11            577899999999999988 7777655


Q ss_pred             c-cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         272 K-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       272 ~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      . -....|..++|+|+|..|+++|.||+|.++.+...
T Consensus       321 ~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  321 HNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             hhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence            4 24678999999999999999999999999998763

>KOG0772|consensus

Probab=99.97  E-value=8e-30  Score=222.60  Aligned_cols=281  Identities=14%  Similarity=0.159  Sum_probs=214.7

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce--
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT--   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~--   81 (444)
                      +.+.+|++|+.|..|++||+.......+.+..+.- .....|.+++|+ +.+..|++.+.....+|+|-...+.....  
T Consensus       177 p~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P-~E~h~i~sl~ys-~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KG  254 (641)
T KOG0772|consen  177 PSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP-CETHQINSLQYS-VTGDQILVVSGSAQAKLLDRDGFEIVEFSKG  254 (641)
T ss_pred             CCCceeeeccccceEEEEecccccccchhhhccCc-ccccccceeeec-CCCCeEEEEecCcceeEEccCCceeeeeecc
Confidence            45789999999999999999776543333443332 446789999999 78999988888889999997643332221  


Q ss_pred             --------eeccccccEEEE--EeCC-CeEEEEecCCcEEEEEcCCCCccccccc------cCCCeEEEEEeccCCEEEE
Q psy8152          82 --------DVSFGEGDIVGV--SRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFN------VGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        82 --------~~~~~~~~v~~~--s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~  144 (444)
                              ...+|...+++-  +|.. ..+++++.||+++||++...+.....+.      ..-+++.++|+|++++||+
T Consensus       255 DQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAa  334 (641)
T KOG0772|consen  255 DQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAA  334 (641)
T ss_pred             chhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhh
Confidence                    224666666654  5543 5699999999999999886554332222      2446899999999999999


Q ss_pred             eeCCCeEEEEEcCCce--eeeee-ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC
Q psy8152         145 GGKENDLKLWDLNTTK--NIFSA-KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ  221 (444)
Q Consensus       145 ~~~d~~i~vwd~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  221 (444)
                      |+.||.|.+|+.....  +...+ ..|..                ...|+||.|+++|++|++-+.|+++++||++  ..
T Consensus       335 gc~DGSIQ~W~~~~~~v~p~~~vk~AH~~----------------g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr--q~  396 (641)
T KOG0772|consen  335 GCLDGSIQIWDKGSRTVRPVMKVKDAHLP----------------GQDITSISFSYDGNYLLSRGFDDTLKVWDLR--QF  396 (641)
T ss_pred             cccCCceeeeecCCcccccceEeeeccCC----------------CCceeEEEeccccchhhhccCCCceeeeecc--cc
Confidence            9999999999986522  22222 22322                2259999999999999999999999999999  45


Q ss_pred             ccceEEEeC--CCCCeeEEEEccCCCEEEEEcC------CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE
Q psy8152         222 RRPVLKVDI--PDVALSCITTTNQSHYVIVGST------TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       222 ~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      .+++....+  ...+-+.++|||+.++|++|+.      .|++.+||..+ ...++++.-....|..+.|+|.-+.|+.|
T Consensus       397 kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t-~d~v~ki~i~~aSvv~~~WhpkLNQi~~g  475 (641)
T KOG0772|consen  397 KKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT-LDTVYKIDISTASVVRCLWHPKLNQIFAG  475 (641)
T ss_pred             ccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc-eeeEEEecCCCceEEEEeecchhhheeee
Confidence            556655443  2345678999999999999754      57899999999 88999888778889999999999999999


Q ss_pred             ECCCcEEEEEcC
Q psy8152         294 SLDRHFRVHDFH  305 (444)
Q Consensus       294 ~~dg~i~vw~~~  305 (444)
                      +.||+++||=-.
T Consensus       476 sgdG~~~vyYdp  487 (641)
T KOG0772|consen  476 SGDGTAHVYYDP  487 (641)
T ss_pred             cCCCceEEEECc
Confidence            999999997433

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=1.7e-28  Score=230.40  Aligned_cols=243  Identities=10%  Similarity=0.084  Sum_probs=186.5

Q ss_pred             EEcCCeEEEEeCCCCccccceeeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCC--------ccccccccCCC
Q psy8152          61 AYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEP--------DQWTNFNVGPQ  129 (444)
Q Consensus        61 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~  129 (444)
                      |+.++.|++|+......+..+  .+|...|.++  +|+ +.+|++|+.|++|+||++.++.        ++..+.+|...
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L--~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~  127 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKL--KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK  127 (568)
T ss_pred             CCceeEEEeeecCCCceEEEE--cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence            566789999998766554444  5788888776  554 6899999999999999997642        12245679999


Q ss_pred             eEEEEEeccCCE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC
Q psy8152         130 LECMKHNKHSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ  208 (444)
Q Consensus       130 v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  208 (444)
                      |.+++|+|++.. |++++.|++|++||+++++.+..+.. ..                  .|.+++|+|+|.+|++++.|
T Consensus       128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-~~------------------~V~SlswspdG~lLat~s~D  188 (568)
T PTZ00420        128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-PK------------------KLSSLKWNIKGNLLSGTCVG  188 (568)
T ss_pred             EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-CC------------------cEEEEEECCCCCEEEEEecC
Confidence            999999997765 57899999999999999887766643 23                  59999999999999999999


Q ss_pred             ceEEEEEcCCCCCccceEEEeCCCCCeeEE-----EEccCCCEEEEEcCCC----cEEEEEcCCCCcceeEecc--ccCc
Q psy8152         209 GYVRVYDPKITTQRRPVLKVDIPDVALSCI-----TTTNQSHYVIVGSTTG----DMMAVDLRGKGKPCYKYKG--FAGC  277 (444)
Q Consensus       209 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~-----~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~--h~~~  277 (444)
                      +.|+|||++   ....+.++.+|.+.+.+.     .|++++.+|++++.++    .|+|||++....++..+..  +.+.
T Consensus       189 ~~IrIwD~R---sg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~  265 (568)
T PTZ00420        189 KHMHIIDPR---KQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAP  265 (568)
T ss_pred             CEEEEEECC---CCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccc
Confidence            999999999   777888888998765432     3458888999877664    7999999964667766543  3344


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCCceE--EEeecCCceeEEEEcCC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSKKLL--RKDYMQSRLTSILVRSD  327 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~--~~~~~~~~i~~~~~~~~  327 (444)
                      +......+++.++++|+.|++|++|++..+.+.  ....+..++.+++|.|.
T Consensus       266 L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pk  317 (568)
T PTZ00420        266 LIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPK  317 (568)
T ss_pred             eEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEccc
Confidence            444444566889999999999999999876432  22235566777777664

>KOG1036|consensus

Probab=99.97  E-value=4e-29  Score=205.19  Aligned_cols=258  Identities=14%  Similarity=0.207  Sum_probs=212.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .....|..|.|+ |.++.|++++.||.+++|++........+   .|..++++..+ +...+++|+.||.|+.+|+.++.
T Consensus        11 pP~d~IS~v~f~-~~~~~LLvssWDgslrlYdv~~~~l~~~~---~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~   86 (323)
T KOG1036|consen   11 PPEDGISSVKFS-PSSSDLLVSSWDGSLRLYDVPANSLKLKF---KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGN   86 (323)
T ss_pred             CChhceeeEEEc-CcCCcEEEEeccCcEEEEeccchhhhhhe---ecCCceeeeeccCCceEEEeccCceEEEEEecCCc
Confidence            346889999999 78999999999999999999988777766   56788887765 46789999999999999999988


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      .. .+..|..+|.|+.+++....+++|+.|++|++||.+...+...+....                   .|.++...  
T Consensus        87 ~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k-------------------kVy~~~v~--  144 (323)
T KOG1036|consen   87 ED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK-------------------KVYCMDVS--  144 (323)
T ss_pred             ce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc-------------------eEEEEecc--
Confidence            77 477899999999999988899999999999999999755555444333                   48888774  


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEE--EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC----cceeEec
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLK--VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG----KPCYKYK  272 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~  272 (444)
                      ++.|++|+.+..|.+||++   +.....+  -..-...+.++++-|++.=.++++.+|.|.+=.+.. .    ...+.|+
T Consensus       145 g~~LvVg~~~r~v~iyDLR---n~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~-s~~~~skkyaFk  220 (323)
T KOG1036|consen  145 GNRLVVGTSDRKVLIYDLR---NLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDD-SEEAQSKKYAFK  220 (323)
T ss_pred             CCEEEEeecCceEEEEEcc---cccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCC-chHHhhhceeEE
Confidence            5889999999999999999   3322221  223456789999999888889999999998866655 3    4456666


Q ss_pred             ccc---------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCC
Q psy8152         273 GFA---------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSD  327 (444)
Q Consensus       273 ~h~---------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~  327 (444)
                      .|.         -+|++|+|+|-.+.||||+.||.|.+||+.+.+.+..+. ....|.+++|+.+
T Consensus       221 CHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~d  285 (323)
T KOG1036|consen  221 CHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMD  285 (323)
T ss_pred             eeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccC
Confidence            664         389999999999999999999999999999988877765 4567999999866

>KOG1408|consensus

Probab=99.97  E-value=1.4e-29  Score=229.22  Aligned_cols=321  Identities=11%  Similarity=0.112  Sum_probs=251.2

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-----c-----CCcEEEEEEcCCeEEEEeCCCC
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-----V-----EESELLIAYSGQKIKIYDTDFK   75 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~-----~~~~l~~~~~d~~i~vw~~~~~   75 (444)
                      ...|.+...|..|+|||+..-..+.+   ....+-|...|+.+.--|     +     -...+++++.|++|++|++..+
T Consensus       336 ~~klscVYndhSlYvWDvrD~~kvgk---~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~c  412 (1080)
T KOG1408|consen  336 TDKLSCVYNDHSLYVWDVRDVNKVGK---CSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFC  412 (1080)
T ss_pred             CceEEEEEcCceEEEEeccccccccc---eeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccc
Confidence            46678888999999999977654222   222236888888887553     0     1246899999999999998752


Q ss_pred             ccccce-----------------------------------eeccc--cccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          76 NFNTNT-----------------------------------DVSFG--EGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        76 ~~~~~~-----------------------------------~~~~~--~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      ..-..+                                   ..-..  ..+..+++|++++|++|..-|+++||++...+
T Consensus       413 tnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~  492 (1080)
T KOG1408|consen  413 TNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELE  492 (1080)
T ss_pred             cccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhh
Confidence            211110                                   00011  22345668999999999999999999999888


Q ss_pred             ccccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         119 DQWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ....+..|...|.|+.|+.   ..++||+++.|..|+|||+... .++.++.+|..                  .|+++.
T Consensus       493 ~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSs------------------sITsvK  554 (1080)
T KOG1408|consen  493 YTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSS------------------SITSVK  554 (1080)
T ss_pred             hhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhccccc------------------ceeEEE
Confidence            8777888999999999986   5689999999999999999763 46677777777                  799999


Q ss_pred             EecCC--CEEEEEeCCceEEEEEcCCCCCccceE--EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         195 FLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVL--KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       195 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      |.-.|  ..+++++.|..|.+--.+....+....  +-......+..|+..|..+++++++.|..|+||++.+ +++.+.
T Consensus       555 Fa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~s-gKq~k~  633 (1080)
T KOG1408|consen  555 FACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIES-GKQVKS  633 (1080)
T ss_pred             EeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccc-cceeee
Confidence            98877  788899999877543333111111111  1112245688999999999999999999999999999 999999


Q ss_pred             ecc---ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152         271 YKG---FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKG  346 (444)
Q Consensus       271 ~~~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d  346 (444)
                      |++   |.+....+...|.|.|||+.+.|+++.++|+-+++++.+.+ |...|+.+.|.++         -+.|++++.|
T Consensus       634 FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nD---------CkHlISvsgD  704 (1080)
T KOG1408|consen  634 FKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLND---------CKHLISVSGD  704 (1080)
T ss_pred             ecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeeccc---------chhheeecCC
Confidence            984   66778889999999999999999999999999999999876 8889999999865         4789999999


Q ss_pred             CCccccCCCcc
Q psy8152         347 DSDEKYDPEHF  357 (444)
Q Consensus       347 ~~i~~W~~~~~  357 (444)
                      |+|-||.+...
T Consensus       705 gCIFvW~lp~~  715 (1080)
T KOG1408|consen  705 GCIFVWKLPLT  715 (1080)
T ss_pred             ceEEEEECchh
Confidence            99999998753

>KOG0301|consensus

Probab=99.97  E-value=1.3e-29  Score=228.85  Aligned_cols=273  Identities=12%  Similarity=0.174  Sum_probs=235.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE-E--E-eCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG-V--S-RYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~-~--s-~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|...|..+++.  ++..+++++.||++++|.-...+.+......+|.+.+.. +  . .++..|++|+.|..|.+|.+.
T Consensus        12 gH~~DVr~v~~~--~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~   89 (745)
T KOG0301|consen   12 GHKSDVRAVAVT--DGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS   89 (745)
T ss_pred             cCccchheeEec--CCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecC
Confidence            899999999987  467899999999999999877777765555566665543 3  2 345679999999999999999


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +..+...+.+|...|.|+....++. +++||.|.++++|-+  +++...+.+|..                  .|.+++.
T Consensus        90 ~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~a------------------sVWAv~~  148 (745)
T KOG0301|consen   90 QAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTA------------------SVWAVAS  148 (745)
T ss_pred             CCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcch------------------heeeeee
Confidence            9999999999999999999877766 999999999999986  456666888887                  8999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      -|.+ .+++|+.|.+|++|.-     .+.+.+|.+|...|+.+++-+++ .+++++.||.|++|++ + +..+.++.+|+
T Consensus       149 l~e~-~~vTgsaDKtIklWk~-----~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~-ge~l~~~~ght  219 (745)
T KOG0301|consen  149 LPEN-TYVTGSADKTIKLWKG-----GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-D-GEVLLEMHGHT  219 (745)
T ss_pred             cCCC-cEEeccCcceeeeccC-----CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-c-Cceeeeeeccc
Confidence            9986 8899999999999983     57788899999999999999875 5778999999999999 5 89999999999


Q ss_pred             CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC-ceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS-RLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      ..|.++...+++..+++++.|++++||+..  ++.+.+.++. .|+++.+...          .-+++|+.||.||||..
T Consensus       220 n~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~N----------gDIvvg~SDG~VrVfT~  287 (745)
T KOG0301|consen  220 NFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLN----------GDIVVGGSDGRVRVFTV  287 (745)
T ss_pred             eEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeC----------CCEEEeccCceEEEEEe
Confidence            999999988888999999999999999986  7888888776 7888887655          34888999999999988


Q ss_pred             Cc
Q psy8152         355 EH  356 (444)
Q Consensus       355 ~~  356 (444)
                      ..
T Consensus       288 ~k  289 (745)
T KOG0301|consen  288 DK  289 (745)
T ss_pred             cc
Confidence            74

>KOG0640|consensus

Probab=99.97  E-value=5.7e-30  Score=210.10  Aligned_cols=284  Identities=13%  Similarity=0.171  Sum_probs=227.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC----c--------------cccceeeccccccEEE--EEeCCCe
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK----N--------------FNTNTDVSFGEGDIVG--VSRYDEC   99 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~----~--------------~~~~~~~~~~~~~v~~--~s~~~~~   99 (444)
                      .|+.++.+.+|+ ++|.++++|+.|..|+|.|+...    +              .++  .+..|...|..  |+|....
T Consensus       110 ~HK~~cR~aafs-~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIR--TlYDH~devn~l~FHPre~I  186 (430)
T KOG0640|consen  110 SHKSPCRAAAFS-PDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIR--TLYDHVDEVNDLDFHPRETI  186 (430)
T ss_pred             ecccceeeeeeC-CCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEe--ehhhccCcccceeecchhhe
Confidence            899999999999 89999999999999999998611    1              111  22355666654  4788899


Q ss_pred             EEEEecCCcEEEEEcCCCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeee
Q psy8152         100 ILTAVKSGDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSV  177 (444)
Q Consensus       100 l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  177 (444)
                      |++++.|++|++||+......+  +.+....+|.++.|+|.|.+|+.|....++++||+++-++........        
T Consensus       187 LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~--------  258 (430)
T KOG0640|consen  187 LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDD--------  258 (430)
T ss_pred             EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccc--------
Confidence            9999999999999987654332  455567899999999999999999999999999999988765543222        


Q ss_pred             CCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CC-CCCeeEEEEccCCCEEEEEcCCCc
Q psy8152         178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IP-DVALSCITTTNQSHYVIVGSTTGD  255 (444)
Q Consensus       178 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~-~~~i~~~~~~~~~~~l~~~~~dg~  255 (444)
                             .+...|+++.+++.+++.++++.||.|++||--   ..+++.++. .| ...|.+..|..+++||++.+.|..
T Consensus       259 -------qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGV---S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~  328 (430)
T KOG0640|consen  259 -------QHTGAITQVRYSSTGSLYVTASKDGAIKLWDGV---SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDST  328 (430)
T ss_pred             -------ccccceeEEEecCCccEEEEeccCCcEEeeccc---cHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcce
Confidence                   244579999999999999999999999999987   788888775 33 457899999999999999999999


Q ss_pred             EEEEEcCCCCcceeEecccc--C---ceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCceEEE--eecCCceeEEEEcCC
Q psy8152         256 MMAVDLRGKGKPCYKYKGFA--G---CVKDIACPLNENLILSVS-LDRHFRVHDFHSKKLLRK--DYMQSRLTSILVRSD  327 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~~~h~--~---~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~--~~~~~~i~~~~~~~~  327 (444)
                      +++|.+.+ ++++..+.|..  +   .-+...|+....|++.-. ..+.+.-||.+++..+..  +.|.+.+..+.-+|.
T Consensus       329 vkLWEi~t-~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~  407 (430)
T KOG0640|consen  329 VKLWEIST-GRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPV  407 (430)
T ss_pred             eeeeeecC-CceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCC
Confidence            99999999 99999887531  1   224456777777776644 346789999998665444  458899998887754


Q ss_pred             CcccccchhhhhccccccCCCccccCC
Q psy8152         328 FSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       328 ~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                               .....++++|...|+|-.
T Consensus       408 ---------~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  408 ---------EPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             ---------CCceeeecccceeeeeee
Confidence                     457889999999999954

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=5.2e-29  Score=233.80  Aligned_cols=227  Identities=12%  Similarity=0.158  Sum_probs=180.0

Q ss_pred             EecCCcEEEEEcCCCCccccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCce--------eeeeeecccceee
Q psy8152         103 AVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTK--------NIFSAKNVSHRVL  173 (444)
Q Consensus       103 ~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~--------~~~~~~~~~~~~~  173 (444)
                      |+..+.|++|+......+..+.+|..+|.+++|+|. +++|++|+.|+.|++|++.++.        ++..+.+|..   
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~---  126 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK---  126 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC---
Confidence            556788999998777777678889999999999995 8999999999999999998642        2234444544   


Q ss_pred             EeeeCCCcccccCccceeEEEEecCCCE-EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST  252 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  252 (444)
                                     .|.+++|+|++.. |++++.|++|+|||++   ....+..+. +...|.+++|+|+|.+|++++.
T Consensus       127 ---------------~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~---tg~~~~~i~-~~~~V~SlswspdG~lLat~s~  187 (568)
T PTZ00420        127 ---------------KISIIDWNPMNYYIMCSSGFDSFVNIWDIE---NEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCV  187 (568)
T ss_pred             ---------------cEEEEEECCCCCeEEEEEeCCCeEEEEECC---CCcEEEEEe-cCCcEEEEEECCCCCEEEEEec
Confidence                           7999999999865 5789999999999999   555566665 5577999999999999999999


Q ss_pred             CCcEEEEEcCCCCcceeEeccccCceeEE-----EecCCCCEEEEEECCC----cEEEEEcCC-CceEEEeecCCceeEE
Q psy8152         253 TGDMMAVDLRGKGKPCYKYKGFAGCVKDI-----ACPLNENLILSVSLDR----HFRVHDFHS-KKLLRKDYMQSRLTSI  322 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~~h~~~i~~~-----~~s~~~~~l~s~~~dg----~i~vw~~~~-~~~~~~~~~~~~i~~~  322 (444)
                      |+.|+|||+++ ++.+.++.+|.+.+...     .|++++.+|++++.++    .|+|||++. .+++..+.+......+
T Consensus       188 D~~IrIwD~Rs-g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L  266 (568)
T PTZ00420        188 GKHMHIIDPRK-QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPL  266 (568)
T ss_pred             CCEEEEEECCC-CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccce
Confidence            99999999999 99999999998765433     3568889999988774    799999995 6666665554444433


Q ss_pred             EEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         323 LVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      ....+      .+.+.++++|+.|+.|++|++..+.
T Consensus       267 ~p~~D------~~tg~l~lsGkGD~tIr~~e~~~~~  296 (568)
T PTZ00420        267 IPHYD------ESTGLIYLIGKGDGNCRYYQHSLGS  296 (568)
T ss_pred             EEeee------CCCCCEEEEEECCCeEEEEEccCCc
Confidence            22211      1346788899999999999986544

>KOG0647|consensus

Probab=99.97  E-value=4.2e-29  Score=204.29  Aligned_cols=263  Identities=10%  Similarity=0.133  Sum_probs=209.6

Q ss_pred             CCCCCcccEEEecCCCcEEEEEcCCC-ccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc
Q psy8152           1 MTLADDYNIYIGSSTGAFKGVNLSKD-KCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT   79 (444)
Q Consensus         1 ~s~~~~~~l~~g~~dg~i~i~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~   79 (444)
                      ||+.....+++|+.||+||+|+++.. ...     ......|.++|.+++|+ .++..+++|+.|+.+++||+.+++...
T Consensus        35 FSP~~~~~~~A~SWD~tVR~wevq~~g~~~-----~ka~~~~~~PvL~v~Ws-ddgskVf~g~~Dk~~k~wDL~S~Q~~~  108 (347)
T KOG0647|consen   35 FSPQADNLLAAGSWDGTVRIWEVQNSGQLV-----PKAQQSHDGPVLDVCWS-DDGSKVFSGGCDKQAKLWDLASGQVSQ  108 (347)
T ss_pred             eccccCceEEecccCCceEEEEEecCCccc-----chhhhccCCCeEEEEEc-cCCceEEeeccCCceEEEEccCCCeee
Confidence            45656678889999999999999874 321     11222799999999999 899999999999999999999996554


Q ss_pred             ceeeccccccEEEEEe----CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEE
Q psy8152          80 NTDVSFGEGDIVGVSR----YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWD  155 (444)
Q Consensus        80 ~~~~~~~~~~v~~~s~----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd  155 (444)
                      .   ..|..+|..+.+    .-.+|++|+.|.+|+.||.+...++. ....+..++++..-  ..+++++..+..|.+|+
T Consensus       109 v---~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~-t~~LPeRvYa~Dv~--~pm~vVata~r~i~vyn  182 (347)
T KOG0647|consen  109 V---AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVA-TLQLPERVYAADVL--YPMAVVATAERHIAVYN  182 (347)
T ss_pred             e---eecccceeEEEEecCCCcceeEecccccceeecccCCCCeee-eeeccceeeehhcc--CceeEEEecCCcEEEEE
Confidence            4   377888877754    23478999999999999999888774 56677788888763  45788888999999999


Q ss_pred             cCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---
Q psy8152         156 LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---  232 (444)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---  232 (444)
                      ++++...+...  ..              .....++||+..++....+.|+-.|.+.+..+. ....+.-++|+.|.   
T Consensus       183 L~n~~te~k~~--~S--------------pLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id-~~~~~~nFtFkCHR~~~  245 (347)
T KOG0647|consen  183 LENPPTEFKRI--ES--------------PLKWQTRCVACFQDKDGFALGSIEGRVAIQYID-DPNPKDNFTFKCHRSTN  245 (347)
T ss_pred             cCCCcchhhhh--cC--------------cccceeeEEEEEecCCceEeeeecceEEEEecC-CCCccCceeEEEeccCC
Confidence            98754332221  11              012258999999999888999999999999998 22225556666664   


Q ss_pred             ------CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE
Q psy8152         233 ------VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       233 ------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                            ..|++|+|+|....|++++.||++.+||-.. ...+.+.+.|..+|++++|+.+|.++|-+
T Consensus       246 ~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda-r~kLk~s~~~~qpItcc~fn~~G~ifaYA  311 (347)
T KOG0647|consen  246 SVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA-RTKLKTSETHPQPITCCSFNRNGSIFAYA  311 (347)
T ss_pred             CCCCceEEecceEeecccceEEEecCCceEEEecchh-hhhhhccCcCCCccceeEecCCCCEEEEE
Confidence                  2578899999988999999999999999888 88888888899999999999999877654

>KOG0973|consensus

Probab=99.97  E-value=1.9e-29  Score=239.19  Aligned_cols=289  Identities=11%  Similarity=0.080  Sum_probs=236.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEE--cCCeEEEEeCCCC--------c--cccceeeccccccEEEE--EeCCCeEEEEec
Q psy8152          40 TNKASVLALNWGNVEESELLIAY--SGQKIKIYDTDFK--------N--FNTNTDVSFGEGDIVGV--SRYDECILTAVK  105 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~--~d~~i~vw~~~~~--------~--~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~  105 (444)
                      .+...|.++..+ |++..++||+  .|+.++||+.+.-        .  .........|.+.|.|+  +++|++||+|+.
T Consensus        11 H~~~~IfSIdv~-pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD   89 (942)
T KOG0973|consen   11 HNEKSIFSIDVH-PDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD   89 (942)
T ss_pred             cCCeeEEEEEec-CCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence            345679999999 8999999999  8999999986421        0  11112234667777765  899999999999


Q ss_pred             CCcEEEEEcCC------------------CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec
Q psy8152         106 SGDVKLWRYKT------------------EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus       106 dg~i~iw~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~  167 (444)
                      |+.|.||....                  .+++..+.+|...|..++|+|++.+|++++.|++|.+|+.++.+.+..+.+
T Consensus        90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~  169 (942)
T KOG0973|consen   90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG  169 (942)
T ss_pred             cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeec
Confidence            99999999772                  013336778999999999999999999999999999999999999999999


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------CCCeeEEEEc
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------DVALSCITTT  241 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~  241 (444)
                      |..                  .|..+.|.|-|++||+-+.|++|++|.+.   .....+.+..+      ...+..+.||
T Consensus       170 H~s------------------~VKGvs~DP~Gky~ASqsdDrtikvwrt~---dw~i~k~It~pf~~~~~~T~f~RlSWS  228 (942)
T KOG0973|consen  170 HQS------------------LVKGVSWDPIGKYFASQSDDRTLKVWRTS---DWGIEKSITKPFEESPLTTFFLRLSWS  228 (942)
T ss_pred             ccc------------------cccceEECCccCeeeeecCCceEEEEEcc---cceeeEeeccchhhCCCcceeeecccC
Confidence            998                  89999999999999999999999999987   55555554433      3357889999


Q ss_pred             cCCCEEEEEc----CCCcEEEEEcCCCCcceeEeccccCceeEEEecCC-----CC------------EEEEEECCCcEE
Q psy8152         242 NQSHYVIVGS----TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN-----EN------------LILSVSLDRHFR  300 (444)
Q Consensus       242 ~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~-----~~------------~l~s~~~dg~i~  300 (444)
                      |+|.+|++..    .-.++.|.+..+ .+.-..|-||.+++.+++|+|.     .+            .+|+|+.|++|.
T Consensus       229 PDG~~las~nA~n~~~~~~~IieR~t-Wk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlS  307 (942)
T KOG0973|consen  229 PDGHHLASPNAVNGGKSTIAIIERGT-WKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLS  307 (942)
T ss_pred             CCcCeecchhhccCCcceeEEEecCC-ceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEE
Confidence            9999999842    233688988877 7888889999999999999972     11            678999999999


Q ss_pred             EEEcCCCceEEEee--cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         301 VHDFHSKKLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       301 vw~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      ||.....+++..+.  ....|..+.|+++         |..|..+|.||+|.+..+...++-
T Consensus       308 VW~T~~~RPl~vi~~lf~~SI~DmsWspd---------G~~LfacS~DGtV~~i~Fee~ElG  360 (942)
T KOG0973|consen  308 VWNTALPRPLFVIHNLFNKSIVDMSWSPD---------GFSLFACSLDGTVALIHFEEKELG  360 (942)
T ss_pred             EEecCCCCchhhhhhhhcCceeeeeEcCC---------CCeEEEEecCCeEEEEEcchHHhC
Confidence            99998887776654  5678999998855         667888999999999998876543

>KOG0639|consensus

Probab=99.97  E-value=9.2e-30  Score=221.55  Aligned_cols=272  Identities=13%  Similarity=0.221  Sum_probs=225.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ...++++|+ .|.|+||++..... ...+..+..+.....|+++.+. |+++.|++|+.-.++.|||+..........+.
T Consensus       430 ~trhVyTgG-kgcVKVWdis~pg~-k~PvsqLdcl~rdnyiRSckL~-pdgrtLivGGeastlsiWDLAapTprikaelt  506 (705)
T KOG0639|consen  430 PTRHVYTGG-KGCVKVWDISQPGN-KSPVSQLDCLNRDNYIRSCKLL-PDGRTLIVGGEASTLSIWDLAAPTPRIKAELT  506 (705)
T ss_pred             CcceeEecC-CCeEEEeeccCCCC-CCccccccccCcccceeeeEec-CCCceEEeccccceeeeeeccCCCcchhhhcC
Confidence            346677766 56899999976543 1122233333457889999999 89999999999999999999765443333322


Q ss_pred             c--ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 F--GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~--~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      .  -....++++|+.+..++++.||.|.|||+.+...++.+.+|...+.||.++++|..|.+|+-|++||.||++.+..+
T Consensus       507 ssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql  586 (705)
T KOG0639|consen  507 SSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL  586 (705)
T ss_pred             CcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence            2  23334556899999999999999999999999999999999999999999999999999999999999999998877


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      .......                   .|.++.++|++.+|++|-.++.+.+....    +...+.+..|...|.++.|.+
T Consensus       587 qqhdF~S-------------------QIfSLg~cP~~dWlavGMens~vevlh~s----kp~kyqlhlheScVLSlKFa~  643 (705)
T KOG0639|consen  587 QQHDFSS-------------------QIFSLGYCPTGDWLAVGMENSNVEVLHTS----KPEKYQLHLHESCVLSLKFAY  643 (705)
T ss_pred             hhhhhhh-------------------hheecccCCCccceeeecccCcEEEEecC----CccceeecccccEEEEEEecc
Confidence            6544333                   49999999999999999999999998877    444555677999999999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .|+++++.+.|+.+..|...- +..+...+ ..++|+++.+|.+.++|++|+.|....||.+
T Consensus       644 cGkwfvStGkDnlLnawrtPy-GasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  644 CGKWFVSTGKDNLLNAWRTPY-GASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             cCceeeecCchhhhhhccCcc-ccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            999999999999999999988 88888777 4678999999999999999999998888865

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.97  E-value=2.5e-27  Score=213.81  Aligned_cols=286  Identities=13%  Similarity=0.087  Sum_probs=213.5

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ..+++++.++.|++|++.+++.    ...+.  . ...+.+++|+ |++..+ ++++.++.|++|++.+++....+.. .
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~----~~~~~--~-~~~~~~l~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~   72 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEV----TRTFP--V-GQRPRGITLS-KDGKLLYVCASDSDTIQVIDLATGEVIGTLPS-G   72 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCce----EEEEE--C-CCCCCceEEC-CCCCEEEEEECCCCeEEEEECCCCcEEEeccC-C
Confidence            4678899999999999987763    12222  2 3446789999 688876 5667789999999998887765543 2


Q ss_pred             ccccEEEEEeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC-eEEEEEcCCceeee
Q psy8152          86 GEGDIVGVSRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN-DLKLWDLNTTKNIF  163 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vwd~~~~~~~~  163 (444)
                      +.....+++|+++.++++ ..++.|++||+.+.+.+. ...+...+.+++|+|++.++++++.++ .+.+||..+++...
T Consensus        73 ~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~  151 (300)
T TIGR03866        73 PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLA-EIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD  151 (300)
T ss_pred             CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEe-EeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence            234456678898877654 568999999999877664 333445578899999999999988765 56778988876655


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCC-------CCe
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPD-------VAL  235 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~-------~~i  235 (444)
                      .+....                   .+.+++|+|++++|+++ ..++.|++||+.   ..+.+..+..+.       ...
T Consensus       152 ~~~~~~-------------------~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~---~~~~~~~~~~~~~~~~~~~~~~  209 (300)
T TIGR03866       152 NVLVDQ-------------------RPRFAEFTADGKELWVSSEIGGTVSVIDVA---TRKVIKKITFEIPGVHPEAVQP  209 (300)
T ss_pred             EEEcCC-------------------CccEEEECCCCCEEEEEcCCCCEEEEEEcC---cceeeeeeeecccccccccCCc
Confidence            443222                   35779999999887544 569999999999   555544443221       123


Q ss_pred             eEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE-ECCCcEEEEEcCCCceEEEe
Q psy8152         236 SCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV-SLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       236 ~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~-~~dg~i~vw~~~~~~~~~~~  313 (444)
                      ..++|+|+++++++ ...++.|.+||+.+ ++.+..+. +...+.+++|+|++++|+++ +.++.|++||+.+++++.++
T Consensus       210 ~~i~~s~dg~~~~~~~~~~~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~  287 (300)
T TIGR03866       210 VGIKLTKDGKTAFVALGPANRVAVVDAKT-YEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSI  287 (300)
T ss_pred             cceEECCCCCEEEEEcCCCCeEEEEECCC-CcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence            46889999998655 45567899999998 87776654 44578999999999998876 46899999999999999998


Q ss_pred             ecCCceeEEEEcC
Q psy8152         314 YMQSRLTSILVRS  326 (444)
Q Consensus       314 ~~~~~i~~~~~~~  326 (444)
                      ......+.+++++
T Consensus       288 ~~~~~~~~~~~~~  300 (300)
T TIGR03866       288 KVGRLPWGVVVRP  300 (300)
T ss_pred             EcccccceeEeCC
Confidence            8777778888753

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1036|consensus

Probab=99.97  E-value=5e-28  Score=198.76  Aligned_cols=260  Identities=15%  Similarity=0.226  Sum_probs=209.5

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +.++.|++++.||.+++|++.....       ...+.|..++.+++|.  +...+++|+.||.|+++|+.++.....-  
T Consensus        23 ~~~~~LLvssWDgslrlYdv~~~~l-------~~~~~~~~plL~c~F~--d~~~~~~G~~dg~vr~~Dln~~~~~~ig--   91 (323)
T KOG1036|consen   23 PSSSDLLVSSWDGSLRLYDVPANSL-------KLKFKHGAPLLDCAFA--DESTIVTGGLDGQVRRYDLNTGNEDQIG--   91 (323)
T ss_pred             CcCCcEEEEeccCcEEEEeccchhh-------hhheecCCceeeeecc--CCceEEEeccCceEEEEEecCCcceeec--
Confidence            4457888899999999999877642       2233689999999998  3789999999999999999988766553  


Q ss_pred             ccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       .|..++.++.  +-...+++|+.|++|++||.+...... .......|.++..  .++.|++|+.+..+.+||+++...
T Consensus        92 -th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~-~~d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~~  167 (323)
T KOG1036|consen   92 -THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG-TFDQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLDE  167 (323)
T ss_pred             -cCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc-ccccCceEEEEec--cCCEEEEeecCceEEEEEcccccc
Confidence             7788888885  457889999999999999998755553 4445558888877  578999999999999999998654


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-CCccceEEEeCCC--------
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-TQRRPVLKVDIPD--------  232 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~--------  232 (444)
                      ..+.....                ....++|+++.|++.-+++++-+|.|.+=.+..+ ......+.|+.|.        
T Consensus       168 ~~q~reS~----------------lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~  231 (323)
T KOG1036|consen  168 PFQRRESS----------------LKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEI  231 (323)
T ss_pred             hhhhcccc----------------ceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceE
Confidence            44222111                1336999999998888999999999988766611 1123445566663        


Q ss_pred             -CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC
Q psy8152         233 -VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       233 -~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                       .+|++|+|+|-...|++|+.||.|.+||+.+ .+.+..|......|..++|+.+|..||.++.
T Consensus       232 ~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~-rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  232 IYPVNAIAFHPIHGTFATGGSDGIVNIWDLFN-RKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             EEEeceeEeccccceEEecCCCceEEEccCcc-hhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence             4789999999989999999999999999999 9999999887788999999999999999874

>KOG0646|consensus

Probab=99.97  E-value=1.6e-28  Score=212.18  Aligned_cols=281  Identities=15%  Similarity=0.164  Sum_probs=220.9

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceeeccccccEEEE-
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDVSFGEGDIVGV-   93 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~-   93 (444)
                      ..+.+|++.++... .++..-.    ...-.++..-  ++.+++++.. -..|.+|.+..........  --.+++.++ 
T Consensus        18 ~~~~~~dl~TGt~~-~~ykg~~----~a~~~sl~~l--~~~yllsaq~~rp~l~vw~i~k~~~~~q~~--v~Pg~v~al~   88 (476)
T KOG0646|consen   18 INCIVWDLRTGTSL-LQYKGSY----LAQAASLTAL--NNEYLLSAQLKRPLLHVWEILKKDQVVQYI--VLPGPVHALA   88 (476)
T ss_pred             cceeEEecCCCcee-EEecCcc----cccchhhhhh--chhheeeecccCccccccccCchhhhhhhc--ccccceeeee
Confidence            45999999999752 1121110    1111112221  2466666654 4689999987655544221  225667776 


Q ss_pred             -EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---------ceeee
Q psy8152          94 -SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---------TKNIF  163 (444)
Q Consensus        94 -s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~  163 (444)
                       +|.|.+|+.|+..|.|++|.+.+|..+..+.+|-..|+|+.|+-++.+|++|+.||.|.+|.+..         -++++
T Consensus        89 s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~  168 (476)
T KOG0646|consen   89 SSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLH  168 (476)
T ss_pred             cCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcccee
Confidence             57888899888999999999999999998889999999999999999999999999999998753         23455


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      .+..|.-                  +|+.+...+.+  .+|++++.|.++++||+.   .+..+.++. ....+.++++.
T Consensus       169 ~f~~Htl------------------sITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS---~g~LLlti~-fp~si~av~lD  226 (476)
T KOG0646|consen  169 IFSDHTL------------------SITDLQIGSGGTNARLYTASEDRTIKLWDLS---LGVLLLTIT-FPSSIKAVALD  226 (476)
T ss_pred             eeccCcc------------------eeEEEEecCCCccceEEEecCCceEEEEEec---cceeeEEEe-cCCcceeEEEc
Confidence            5555555                  79999887764  789999999999999999   667776665 45669999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCC---------------CcceeEeccccC--ceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGK---------------GKPCYKYKGFAG--CVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~~h~~--~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      |-++.+++|+.+|.|.+.++...               +..+..+.||.+  .|+|++++-||.+|++|+.||+|+|||+
T Consensus       227 pae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi  306 (476)
T KOG0646|consen  227 PAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDI  306 (476)
T ss_pred             ccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEec
Confidence            99999999999999999887641               234556678988  9999999999999999999999999999


Q ss_pred             CCCceEEEee-cCCceeEEEEcCC
Q psy8152         305 HSKKLLRKDY-MQSRLTSILVRSD  327 (444)
Q Consensus       305 ~~~~~~~~~~-~~~~i~~~~~~~~  327 (444)
                      .+.++++++. ..++|+.+.+.+-
T Consensus       307 ~S~Q~iRtl~~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  307 YSKQCIRTLQTSKGPVTNLQINPL  330 (476)
T ss_pred             chHHHHHHHhhhccccceeEeecc
Confidence            9999999988 8899999998654

>KOG0299|consensus

Probab=99.97  E-value=5.9e-28  Score=208.32  Aligned_cols=273  Identities=13%  Similarity=0.205  Sum_probs=220.2

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccc---eee-------eeeeccc--CcccceEEEeeeccCCcEEEEEEcCCeEEEEe
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCI---IKN-------IQNVKYI--TNKASVLALNWGNVEESELLIAYSGQKIKIYD   71 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~---~~~-------~~~~~~~--~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~   71 (444)
                      .++.++++++.+|+|.-|++.+++..   ...       ...++..  .|...|.+++.+ +++++|++|+.|..|.||+
T Consensus       152 ~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS-~Dgkylatgg~d~~v~Iw~  230 (479)
T KOG0299|consen  152 PDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVS-SDGKYLATGGRDRHVQIWD  230 (479)
T ss_pred             ccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEc-CCCcEEEecCCCceEEEec
Confidence            45689999999999999999887732   111       1112222  688999999999 8999999999999999999


Q ss_pred             CCCCccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC
Q psy8152          72 TDFKNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN  149 (444)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  149 (444)
                      ..+.+.++.+.  +|...|.++.+  ....|++++.|+.|++|++.....+.++++|+..|..+....-++.+-+|+.|.
T Consensus       231 ~~t~ehv~~~~--ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDr  308 (479)
T KOG0299|consen  231 CDTLEHVKVFK--GHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDR  308 (479)
T ss_pred             Ccccchhhccc--ccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccc
Confidence            99999999875  88889988765  345699999999999999999998989999999999998888888888888999


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      ++++|++..... ..+.++..                  .+-|++|-.+ ..|++|+.+|.|.+|++-   ..+++++..
T Consensus       309 T~rlwKi~eesq-lifrg~~~------------------sidcv~~In~-~HfvsGSdnG~IaLWs~~---KKkplf~~~  365 (479)
T KOG0299|consen  309 TVRLWKIPEESQ-LIFRGGEG------------------SIDCVAFIND-EHFVSGSDNGSIALWSLL---KKKPLFTSR  365 (479)
T ss_pred             eeEEEeccccce-eeeeCCCC------------------CeeeEEEecc-cceeeccCCceEEEeeec---ccCceeEee
Confidence            999999954332 33445554                  5899999754 789999999999999999   777877654


Q ss_pred             C-C-----------CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC---CcceeEeccccCceeEEEecCCCCEEEEE-
Q psy8152         230 I-P-----------DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK---GKPCYKYKGFAGCVKDIACPLNENLILSV-  293 (444)
Q Consensus       230 ~-~-----------~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~h~~~i~~~~~s~~~~~l~s~-  293 (444)
                      . |           ..+|++++..|...++++|+.+|.|++|-+...   -+++..++ ..+.|++++|+++|+.|++| 
T Consensus       366 ~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagi  444 (479)
T KOG0299|consen  366 LAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGI  444 (479)
T ss_pred             ccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEec
Confidence            1 1           237999999999999999999999999998872   24555555 67899999999999966555 


Q ss_pred             ECCCcEEEEE
Q psy8152         294 SLDRHFRVHD  303 (444)
Q Consensus       294 ~~dg~i~vw~  303 (444)
                      +....+-=|-
T Consensus       445 GkEhRlGRW~  454 (479)
T KOG0299|consen  445 GKEHRLGRWW  454 (479)
T ss_pred             ccccccceee
Confidence            4444444443

>KOG0301|consensus

Probab=99.96  E-value=6.2e-28  Score=218.03  Aligned_cols=264  Identities=13%  Similarity=0.171  Sum_probs=220.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEE-EeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLA-LNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ++..+++++.||++++|+-..++..  ....+.  +|.+-|.+ ++|-+.++..|++|+.|++|.+|.+.+......+. 
T Consensus        24 ~~~~i~s~sRd~t~~vw~~~~~~~l--~~~~~~--~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~Lk-   98 (745)
T KOG0301|consen   24 DGVCIISGSRDGTVKVWAKKGKQYL--ETHAFE--GPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLK-   98 (745)
T ss_pred             CCeEEeecCCCCceeeeeccCcccc--cceecc--cCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhh-
Confidence            3456899999999999997666631  111122  67787777 88875456679999999999999999998888875 


Q ss_pred             ccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          84 SFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        84 ~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                       +|...|++++. ....+++|+.|.++++|...  ++...+.+|+..|+++++-|.+ .++||+.|.+|++|.-  ++.+
T Consensus        99 -gH~snVC~ls~~~~~~~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l  172 (745)
T KOG0301|consen   99 -GHKSNVCSLSIGEDGTLISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLL  172 (745)
T ss_pred             -ccccceeeeecCCcCceEecccccceEEecch--hhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--Cchh
Confidence             88999999984 33448999999999999864  4455588999999999999976 8999999999999985  7788


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      .++.+|..                  .|+.+++.|+ ..|++|+.||.|++|++.    +..+..+.+|...|.++...+
T Consensus       173 ~tf~gHtD------------------~VRgL~vl~~-~~flScsNDg~Ir~w~~~----ge~l~~~~ghtn~vYsis~~~  229 (745)
T KOG0301|consen  173 KTFSGHTD------------------CVRGLAVLDD-SHFLSCSNDGSIRLWDLD----GEVLLEMHGHTNFVYSISMAL  229 (745)
T ss_pred             hhhccchh------------------heeeeEEecC-CCeEeecCCceEEEEecc----CceeeeeeccceEEEEEEecC
Confidence            89999888                  8999999986 468899999999999997    778888999999999999888


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++..+++++.|++++||+..   .+.+.+.-....|+++.+-++|. |++|++||.||||....
T Consensus       230 ~~~~Ivs~gEDrtlriW~~~---e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  230 SDGLIVSTGEDRTLRIWKKD---ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK  289 (745)
T ss_pred             CCCeEEEecCCceEEEeecC---ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence            88899999999999999864   56666664556899998877776 77889999999998764

>KOG0639|consensus

Probab=99.96  E-value=5.2e-29  Score=216.92  Aligned_cols=287  Identities=10%  Similarity=0.140  Sum_probs=235.0

Q ss_pred             eeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccceeeccccccE--EEEEeCCCeEEEEecCC
Q psy8152          33 IQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTNTDVSFGEGDI--VGVSRYDECILTAVKSG  107 (444)
Q Consensus        33 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~dg  107 (444)
                      ...+..+.|..-|.+++++ ...++++||+. |.|+|||+....   .+..+.+......+  +.+.|+|+.|++|+.-.
T Consensus       410 arq~~tL~HGEvVcAvtIS-~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeas  487 (705)
T KOG0639|consen  410 ARQINTLAHGEVVCAVTIS-NPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEAS  487 (705)
T ss_pred             HHhhhhhccCcEEEEEEec-CCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccc
Confidence            3445566899999999999 67889999998 899999996432   23333332223333  44689999999999999


Q ss_pred             cEEEEEcCCCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         108 DVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       108 ~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      ++.|||+.......  .+.......++++.+|+.+..+++..||.|.|||+.+...+..+++|..               
T Consensus       488 tlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtD---------------  552 (705)
T KOG0639|consen  488 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD---------------  552 (705)
T ss_pred             eeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCC---------------
Confidence            99999998765542  1222334577889999999999999999999999999999999999988               


Q ss_pred             CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG  265 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  265 (444)
                         .+.||..+++|..|-+|+-|.+||.||++   ..+.+.... ....|.++.++|++.+|++|-.++.+.|....  +
T Consensus       553 ---GascIdis~dGtklWTGGlDntvRcWDlr---egrqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~s--k  623 (705)
T KOG0639|consen  553 ---GASCIDISKDGTKLWTGGLDNTVRCWDLR---EGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTS--K  623 (705)
T ss_pred             ---CceeEEecCCCceeecCCCccceeehhhh---hhhhhhhhh-hhhhheecccCCCccceeeecccCcEEEEecC--C
Confidence               79999999999999999999999999999   665555433 34569999999999999999999999888766  5


Q ss_pred             cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcccccc
Q psy8152         266 KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEK  345 (444)
Q Consensus       266 ~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~  345 (444)
                      ...+.+.-|.+.|.++.|.+.|+++++.+.|..+..|...-|..+-.......|.+..++.+         .++++||+.
T Consensus       624 p~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~d---------dkyIVTGSG  694 (705)
T KOG0639|consen  624 PEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFD---------DKYIVTGSG  694 (705)
T ss_pred             ccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccC---------ceEEEecCC
Confidence            66777888999999999999999999999999999999998888777667777777766543         589999999


Q ss_pred             CCCccccCC
Q psy8152         346 GDSDEKYDP  354 (444)
Q Consensus       346 d~~i~~W~~  354 (444)
                      |....||.+
T Consensus       695 dkkATVYeV  703 (705)
T KOG0639|consen  695 DKKATVYEV  703 (705)
T ss_pred             CcceEEEEE
Confidence            987777643

>KOG0300|consensus

Probab=99.96  E-value=5.2e-28  Score=199.30  Aligned_cols=271  Identities=14%  Similarity=0.189  Sum_probs=221.5

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC------CC----
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD------FK----   75 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~------~~----   75 (444)
                      ..++.+++.|.+-+||.++++.+ .   -.+.  +|.+.|.++.|+ +.+.++++++.|++..||...      ..    
T Consensus       160 qpi~gtASADhTA~iWs~Esg~C-L---~~Y~--GH~GSVNsikfh-~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~  232 (481)
T KOG0300|consen  160 QPICGTASADHTARIWSLESGAC-L---ATYT--GHTGSVNSIKFH-NSGLLLLTASGDETAHIWKAAVNWEVPSNNAPS  232 (481)
T ss_pred             CcceeecccccceeEEeeccccc-e---eeec--ccccceeeEEec-cccceEEEccCCcchHHHHHhhcCcCCCCCCCC
Confidence            35788999999999999999997 2   2222  999999999999 799999999999999999721      10    


Q ss_pred             ----c------------------------cccceeeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          76 ----N------------------------FNTNTDVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        76 ----~------------------------~~~~~~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                          +                        .+....+.+|...|.+..  ..|+.+++++.|.+..+||++++..+..+.+
T Consensus       233 ~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtG  312 (481)
T KOG0300|consen  233 DHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTG  312 (481)
T ss_pred             CCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccC
Confidence                0                        000112235555555543  3578899999999999999999999999999


Q ss_pred             cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE
Q psy8152         126 VGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV  204 (444)
Q Consensus       126 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  204 (444)
                      |....+.++-+|..+++++++.|.+.++||++. -..+..+++|..                  .|+++.|..+ ..+++
T Consensus       313 Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtd------------------tVTS~vF~~d-d~vVS  373 (481)
T KOG0300|consen  313 HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTD------------------TVTSVVFNTD-DRVVS  373 (481)
T ss_pred             cchhccccccCCcceEEEEeccCceeEeccchhhcceeeeeccccc------------------ceeEEEEecC-Cceee
Confidence            999999999999999999999999999999986 345677888887                  7999999875 67899


Q ss_pred             EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-----cccCcee
Q psy8152         205 CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-----GFAGCVK  279 (444)
Q Consensus       205 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~h~~~i~  279 (444)
                      |+.|.+|++||++  +...++.++. ...+++.++.+..+..|+.--.+..|++||+.  +..+..++     +|..-|+
T Consensus       374 gSDDrTvKvWdLr--NMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDln--G~RlaRlPrtsRqgHrRMV~  448 (481)
T KOG0300|consen  374 GSDDRTVKVWDLR--NMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLN--GNRLARLPRTSRQGHRRMVT  448 (481)
T ss_pred             cCCCceEEEeeec--cccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecC--CCccccCCcccccccceeee
Confidence            9999999999999  5566777666 45678999999888889988889999999997  45454444     8999999


Q ss_pred             EEEecCCC--CEEEEEECCCcEEEEEcCCC
Q psy8152         280 DIACPLNE--NLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       280 ~~~~s~~~--~~l~s~~~dg~i~vw~~~~~  307 (444)
                      |++|..+.  .-|++++.|..+.-|++...
T Consensus       449 c~AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  449 CCAWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             eeeccccCcccccccccccceeeeeEeccc
Confidence            99997543  46889999999999998753

>KOG0283|consensus

Probab=99.96  E-value=1.4e-28  Score=227.56  Aligned_cols=239  Identities=15%  Similarity=0.184  Sum_probs=190.8

Q ss_pred             cccccEEEE--EeCCCeEEEEecCCcEEEEEcCC--------------------------------C-------------
Q psy8152          85 FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKT--------------------------------E-------------  117 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~--------------------------------~-------------  117 (444)
                      .|.+.|+++  +++|+|||+|+.|+.|+||.+..                                .             
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~  344 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ  344 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence            677777765  89999999999999999998654                                0             


Q ss_pred             ---------------CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152         118 ---------------PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       118 ---------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                                     +++..+.+|.+.|..+.|+. .++|++++.|.+|++|++....++..+... .            
T Consensus       345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn-d------------  410 (712)
T KOG0283|consen  345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHN-D------------  410 (712)
T ss_pred             CccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEecC-C------------
Confidence                           01224678999999999996 469999999999999999999999887533 3            


Q ss_pred             cccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEc
Q psy8152         183 DLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDL  261 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  261 (444)
                            .|+||+|+|.. +||++|+-|+.||||++.   ..+.+.-.. -..-|++++|.|+|++.++|+.+|.+++|+.
T Consensus       411 ------fVTcVaFnPvDDryFiSGSLD~KvRiWsI~---d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~fY~t  480 (712)
T KOG0283|consen  411 ------FVTCVAFNPVDDRYFISGSLDGKVRLWSIS---DKKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRFYDT  480 (712)
T ss_pred             ------eeEEEEecccCCCcEeecccccceEEeecC---cCeeEeehh-hhhhheeEEeccCCceEEEEEeccEEEEEEc
Confidence                  69999999965 999999999999999999   555554333 3467999999999999999999999999999


Q ss_pred             CCCCcceeEecc--c------cCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCceEEEee-cC--CceeEEEEcCCCc
Q psy8152         262 RGKGKPCYKYKG--F------AGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKLLRKDY-MQ--SRLTSILVRSDFS  329 (444)
Q Consensus       262 ~~~~~~~~~~~~--h------~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~~~~~~-~~--~~i~~~~~~~~~~  329 (444)
                      .. .+....+.-  |      ...|+++.|.|... .|++.+.|..|||||.....++.++. +.  ..-....|.    
T Consensus       481 ~~-lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs----  555 (712)
T KOG0283|consen  481 EG-LKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFS----  555 (712)
T ss_pred             cC-CeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEc----
Confidence            87 665554431  1      22799999998553 57777899999999998888888775 11  122233333    


Q ss_pred             ccccchhhhhccccccCCCccccCCCcc
Q psy8152         330 LENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       330 ~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                           .++++++++++|..|.+|+....
T Consensus       556 -----~Dgk~IVs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  556 -----SDGKHIVSASEDSWVYIWKNDSF  578 (712)
T ss_pred             -----cCCCEEEEeecCceEEEEeCCCC
Confidence                 45789999999999999998543

>KOG2055|consensus

Probab=99.96  E-value=6.6e-28  Score=208.02  Aligned_cols=277  Identities=14%  Similarity=0.184  Sum_probs=229.5

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ....+++++.||.++||.+......  .++.+.  --..+|.+.+|. |+|. .+++++.-..++.||+.+.+..+.-..
T Consensus       224 ~~plllvaG~d~~lrifqvDGk~N~--~lqS~~--l~~fPi~~a~f~-p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~  298 (514)
T KOG2055|consen  224 TAPLLLVAGLDGTLRIFQVDGKVNP--KLQSIH--LEKFPIQKAEFA-PNGHSVIFTSGRRKYLYSYDLETAKVTKLKPP  298 (514)
T ss_pred             CCceEEEecCCCcEEEEEecCccCh--hheeee--eccCccceeeec-CCCceEEEecccceEEEEeeccccccccccCC
Confidence            3467999999999999999877642  233333  236899999999 6787 889999999999999999888776554


Q ss_pred             ccccccE---EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          84 SFGEGDI---VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        84 ~~~~~~v---~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      .++....   ..+++++++|+..+..|.|.+....+++.+. .+...+.|..++|+.+++.|++++.+|.|.+||+++..
T Consensus       299 ~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~-s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~  377 (514)
T KOG2055|consen  299 YGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELIT-SFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNS  377 (514)
T ss_pred             CCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhh-eeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcc
Confidence            4554333   4558999999999999999999999999884 66778899999999999999999999999999999999


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC---CCCccceEEEeCCCCCeeE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI---TTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~~~~i~~  237 (444)
                      +++.+...+.                 ..-++++.++++.+||+|+..|.|.|||...   +...+|+.++..-...|++
T Consensus       378 ~~~rf~D~G~-----------------v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Its  440 (514)
T KOG2055|consen  378 CLHRFVDDGS-----------------VHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITS  440 (514)
T ss_pred             eEEEEeecCc-----------------cceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeee
Confidence            9888876554                 1246778889999999999999999999662   4567788887777788999


Q ss_pred             EEEccCCCEEEEEcC--CCcEEEEEcCCCCcceeEecc---ccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         238 ITTTNQSHYVIVGST--TGDMMAVDLRGKGKPCYKYKG---FAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      |.|+|+.++||.++.  ...+++-.+.+ ......|+.   .-+.|+|++|+|.+.+||.|...|.|.+|.+.
T Consensus       441 l~Fn~d~qiLAiaS~~~knalrLVHvPS-~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  441 LQFNHDAQILAIASRVKKNALRLVHVPS-CTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             eeeCcchhhhhhhhhccccceEEEeccc-eeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            999999999888764  56799998887 666666663   23578999999999999999999999999875

>KOG1332|consensus

Probab=99.96  E-value=3.3e-28  Score=193.27  Aligned_cols=247  Identities=9%  Similarity=0.095  Sum_probs=196.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc-ccceeeccccccEEEEE---e-CCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF-NTNTDVSFGEGDIVGVS---R-YDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~v~~~s---~-~~~~l~~~~~dg~i~iw~~  114 (444)
                      .|...|..+... -.+.+|+|++.|++|+|+.+..... .....+.+|.++|..+.   | .|.+|+++++||.|.||.-
T Consensus         9 ~H~D~IHda~lD-yygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen    9 QHEDMIHDAQLD-YYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             hhhhhhhHhhhh-hhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence            788999988877 5799999999999999999876543 44455679999998874   3 5889999999999999998


Q ss_pred             CCCCccc--cccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCc-ee--eeeeecccceeeEeeeCCCcccccCc
Q psy8152         115 KTEPDQW--TNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTT-KN--IFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       115 ~~~~~~~--~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      .+++..+  ....|...|++++|.|  -|-.|++++.||.|.|.+.+.. .-  ......|.-                 
T Consensus        88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~-----------------  150 (299)
T KOG1332|consen   88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEI-----------------  150 (299)
T ss_pred             CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccc-----------------
Confidence            8885443  4556899999999999  6789999999999999998864 21  112223333                 


Q ss_pred             cceeEEEEecC---C-----------CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC----CCEEEE
Q psy8152         188 VWVNGISFLPN---S-----------DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ----SHYVIV  249 (444)
Q Consensus       188 ~~i~~~~~~~~---~-----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~  249 (444)
                       .|++++|.|-   |           +.|++|+.|..|+||+.. ......-.++.+|...|+.++|.|.    -.+|++
T Consensus       151 -GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~-~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS  228 (299)
T KOG1332|consen  151 -GVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFD-SDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIAS  228 (299)
T ss_pred             -ccceeeecCcCCCccccccCcccccceeeccCCccceeeeecC-CcchhhhhhhhhcchhhhhhhhccccCCCceeeEE
Confidence             5788888775   3           579999999999999998 4445566668999999999999996    357999


Q ss_pred             EcCCCcEEEEEcCCCCc--ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         250 GSTTGDMMAVDLRGKGK--PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~--~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++.||++.||-......  ....+......+..+.||+.|++|+.++.|..|.+|.-..
T Consensus       229 ~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  229 CSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             ecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            99999999998764111  1122223457899999999999999999999999997553

>KOG2055|consensus

Probab=99.96  E-value=1.9e-27  Score=205.21  Aligned_cols=283  Identities=14%  Similarity=0.150  Sum_probs=229.6

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--ccccceeeccccccEEEEEeCCC-eEEEEecCCcEEEEEcCCCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--NFNTNTDVSFGEGDIVGVSRYDE-CILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~s~~~~-~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .+.|++|.|+ |....|++|+.|++++||.+...  ..++.+.+........+|+|+|. .+++++....++.||+.+.+
T Consensus       213 ~~~I~sv~FH-p~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak  291 (514)
T KOG2055|consen  213 HGGITSVQFH-PTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK  291 (514)
T ss_pred             cCCceEEEec-CCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence            4789999999 79999999999999999998643  34444444333444456789998 89999999999999999887


Q ss_pred             ccc--ccccc-CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         119 DQW--TNFNV-GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       119 ~~~--~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      ...  ...++ ...+.....+|++++|+..+..|.|.+....+++.+.+++..+.                   |..++|
T Consensus       292 ~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~-------------------v~~~~f  352 (514)
T KOG2055|consen  292 VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGV-------------------VSDFTF  352 (514)
T ss_pred             cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccE-------------------EeeEEE
Confidence            654  22233 23567788899999999999999999999999999988877665                   999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC-CeeEEEEccCCCEEEEEcCCCcEEEEEcCC-----CCccee
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV-ALSCITTTNQSHYVIVGSTTGDMMAVDLRG-----KGKPCY  269 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~  269 (444)
                      +.+++.|++++.+|.|.+||++   +..+++.+.-..+ .-++++.++++.|||+|+..|.|.|||..+     ..+|+.
T Consensus       353 sSdsk~l~~~~~~GeV~v~nl~---~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik  429 (514)
T KOG2055|consen  353 SSDSKELLASGGTGEVYVWNLR---QNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIK  429 (514)
T ss_pred             ecCCcEEEEEcCCceEEEEecC---CcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchh
Confidence            9999999999999999999999   7777777763222 235778889999999999999999999654     257788


Q ss_pred             EeccccCceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhcccc
Q psy8152         270 KYKGFAGCVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSE  343 (444)
Q Consensus       270 ~~~~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~  343 (444)
                      ++..-...|++++|+|+.++||.+|  ....+|+-.+.+......+.    .-+.++|++|+|.         +.+++.|
T Consensus       430 ~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~---------sG~lAvG  500 (514)
T KOG2055|consen  430 TVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPN---------SGYLAVG  500 (514)
T ss_pred             hhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCC---------CceEEee
Confidence            8887888999999999999888776  46779999888766655544    2356899999854         5789999


Q ss_pred             ccCCCccccCCCc
Q psy8152         344 EKGDSDEKYDPEH  356 (444)
Q Consensus       344 ~~d~~i~~W~~~~  356 (444)
                      ..+|.+.+|.+..
T Consensus       501 Ne~grv~l~kL~h  513 (514)
T KOG2055|consen  501 NEAGRVHLFKLHH  513 (514)
T ss_pred             cCCCceeeEeecc
Confidence            9999999998753

>KOG1408|consensus

Probab=99.96  E-value=1.8e-27  Score=215.67  Aligned_cols=280  Identities=14%  Similarity=0.120  Sum_probs=223.5

Q ss_pred             ccEEEecCCCcEEEEEcCCCccce---eee---------------eeec-------------ccCcccceEEEeeeccCC
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCII---KNI---------------QNVK-------------YITNKASVLALNWGNVEE   55 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~---~~~---------------~~~~-------------~~~h~~~v~~~~~~~~~~   55 (444)
                      .-+++++.|++|++|++.......   .++               +.+.             .......|++++.+ |++
T Consensus       393 ~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vS-p~g  471 (1080)
T KOG1408|consen  393 GCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVS-PDG  471 (1080)
T ss_pred             cceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEEC-CCc
Confidence            458999999999999997632100   000               0000             01334579999999 899


Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeC-----CCeEEEEecCCcEEEEEcCCC-CccccccccCCC
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRY-----DECILTAVKSGDVKLWRYKTE-PDQWTNFNVGPQ  129 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~-----~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~  129 (444)
                      ++||+|..-|+++||+++..+....+.  .|...|.++...     .++|++++.|..|+|||+... .+++++-+|...
T Consensus       472 qhLAsGDr~GnlrVy~Lq~l~~~~~~e--AHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSss  549 (1080)
T KOG1408|consen  472 QHLASGDRGGNLRVYDLQELEYTCFME--AHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSS  549 (1080)
T ss_pred             ceecccCccCceEEEEehhhhhhhhee--cccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccc
Confidence            999999999999999999888888776  778899888532     468999999999999998765 445577789999


Q ss_pred             eEEEEEeccC--CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC
Q psy8152         130 LECMKHNKHS--NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK  207 (444)
Q Consensus       130 v~~~~~~~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  207 (444)
                      |+++.|.-.|  ..+++++.|..|.+--.+.......+..+.+             ......++.|+..|..+++++++.
T Consensus       550 ITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~-------------t~~ktTlYDm~Vdp~~k~v~t~cQ  616 (1080)
T KOG1408|consen  550 ITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQ-------------TLSKTTLYDMAVDPTSKLVVTVCQ  616 (1080)
T ss_pred             eeEEEEeecCCceEEEeccCchhhheehhccccCceecccccc-------------ccccceEEEeeeCCCcceEEEEec
Confidence            9999998866  6788999998776433332111111222211             011235899999999999999999


Q ss_pred             CceEEEEEcCCCCCccceEEEeC---CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152         208 QGYVRVYDPKITTQRRPVLKVDI---PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       208 d~~i~i~d~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s  284 (444)
                      |..|+||++.   .++.+..|++   |.+....+...|.|.||++.+.|.++.++|+.+ ++++.+..||...|+.+.|.
T Consensus       617 Drnirif~i~---sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s-gEcvA~m~GHsE~VTG~kF~  692 (1080)
T KOG1408|consen  617 DRNIRIFDIE---SGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS-GECVAQMTGHSEAVTGVKFL  692 (1080)
T ss_pred             ccceEEEecc---ccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc-chhhhhhcCcchheeeeeec
Confidence            9999999999   7888888774   556778899999999999999999999999999 99999999999999999999


Q ss_pred             CCCCEEEEEECCCcEEEEEcCC
Q psy8152         285 LNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       285 ~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +|-+.|++.+.||.|.||.+..
T Consensus       693 nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  693 NDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             ccchhheeecCCceEEEEECch
Confidence            9999999999999999999864

>KOG1063|consensus

Probab=99.96  E-value=3.3e-27  Score=213.25  Aligned_cols=327  Identities=12%  Similarity=0.135  Sum_probs=243.1

Q ss_pred             cccEEEecCCCcEEEEEcCCCcc-----------------ceeeeeeec-------cc-CcccceEEEeeeccCCcEEEE
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKC-----------------IIKNIQNVK-------YI-TNKASVLALNWGNVEESELLI   60 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~-----------------~~~~~~~~~-------~~-~h~~~v~~~~~~~~~~~~l~~   60 (444)
                      ..+|++++.|..||||.+.-+..                 ....+..+.       .+ +|.+.|.++.|+ |.+..|++
T Consensus       206 ~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~-p~~~~LLS  284 (764)
T KOG1063|consen  206 DLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWH-PEGLDLLS  284 (764)
T ss_pred             cEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEc-cchhhhee
Confidence            46799999999999998843330                 001111111       12 999999999999 78889999


Q ss_pred             EEcCCeEEEEeCCCC--ccccceeeccc---cccEEE--EEeCCCeEEEEecCCcEEEEEcCCC---CccccccccCCCe
Q psy8152          61 AYSGQKIKIYDTDFK--NFNTNTDVSFG---EGDIVG--VSRYDECILTAVKSGDVKLWRYKTE---PDQWTNFNVGPQL  130 (444)
Q Consensus        61 ~~~d~~i~vw~~~~~--~~~~~~~~~~~---~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~v  130 (444)
                      ++.|.++.+|.....  -.+...++-.-   .....+  ++|+++.+++-+..|..++|..+..   .....+.+|...|
T Consensus       285 ASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V  364 (764)
T KOG1063|consen  285 ASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGV  364 (764)
T ss_pred             cccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccc
Confidence            999999999987543  33333332111   222332  4788899999999999999993332   2222567899999


Q ss_pred             EEEEEeccCCEEEEeeCCCeEEEEEcCCce----eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe
Q psy8152         131 ECMKHNKHSNIIATGGKENDLKLWDLNTTK----NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS  206 (444)
Q Consensus       131 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  206 (444)
                      ..++|+|.|.+|++.+.|.+-|+|-.-..+    .+..-+.|+.                  .++|++|-+....+++|.
T Consensus       365 ~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGy------------------Dl~c~~~vn~~~~FVSgA  426 (764)
T KOG1063|consen  365 KDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGY------------------DLTCLSFVNEDLQFVSGA  426 (764)
T ss_pred             eeeeecCCCCEEEEeccccceeeecccccccceeeecccccccc------------------cceeeehccCCceeeecc
Confidence            999999999999999999999998765222    1222223333                  588888887556788888


Q ss_pred             CCceEEEEEcCC----------C-------------------CCcc----------------------------------
Q psy8152         207 KQGYVRVYDPKI----------T-------------------TQRR----------------------------------  223 (444)
Q Consensus       207 ~d~~i~i~d~~~----------~-------------------~~~~----------------------------------  223 (444)
                      ....+|+|+...          .                   -..+                                  
T Consensus       427 dEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~E  506 (764)
T KOG1063|consen  427 DEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTE  506 (764)
T ss_pred             cceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChH
Confidence            888888887531          0                   0000                                  


Q ss_pred             ----------ceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-----cEEEEEcCCCCcceeEeccccCceeEEEecCCCC
Q psy8152         224 ----------PVLKVDIPDVALSCITTTNQSHYVIVGSTTG-----DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN  288 (444)
Q Consensus       224 ----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~  288 (444)
                                .+.++.+|...|.+++.+|+++++|+++...     .|++|+..+ ...++.+.+|.-.|+.++|||+++
T Consensus       507 dqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~-W~~~~~L~~HsLTVT~l~FSpdg~  585 (764)
T KOG1063|consen  507 DQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN-WLQVQELEGHSLTVTRLAFSPDGR  585 (764)
T ss_pred             HHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc-hhhhheecccceEEEEEEECCCCc
Confidence                      0112357888999999999999999987654     499999999 888899999999999999999999


Q ss_pred             EEEEEECCCcEEEEEcCCCceEE-EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         289 LILSVSLDRHFRVHDFHSKKLLR-KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       289 ~l~s~~~dg~i~vw~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                      +|++.+.|+++.+|......... .+.....-+.+.|.++|+     |++.+++|+|.|.+|++|.....
T Consensus       586 ~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~-----pde~~FaTaSRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  586 YLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWS-----PDEKYFATASRDKKVKVWEEPDL  650 (764)
T ss_pred             EEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccC-----cccceeEEecCCceEEEEeccCc
Confidence            99999999999999986533221 222345567788899998     67788999999999999988765

>KOG1332|consensus

Probab=99.96  E-value=2.5e-27  Score=188.34  Aligned_cols=237  Identities=13%  Similarity=0.188  Sum_probs=189.9

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-cCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-VEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +.+|+++++|++|+|+....+.. .+.+..+.  +|.++|+.++|.. .-|.+||+++.||.|.||.-.+++..+.....
T Consensus        23 gkrlATcsSD~tVkIf~v~~n~~-s~ll~~L~--Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~   99 (299)
T KOG1332|consen   23 GKRLATCSSDGTVKIFEVRNNGQ-SKLLAELT--GHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHA   99 (299)
T ss_pred             cceeeeecCCccEEEEEEcCCCC-ceeeeEec--CCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhh
Confidence            57899999999999999987764 22333333  9999999999973 36889999999999999999999888777777


Q ss_pred             cccccEEEEE--eC--CCeEEEEecCCcEEEEEcCCC-C--ccccccccCCCeEEEEEecc---C-----------CEEE
Q psy8152          85 FGEGDIVGVS--RY--DECILTAVKSGDVKLWRYKTE-P--DQWTNFNVGPQLECMKHNKH---S-----------NIIA  143 (444)
Q Consensus        85 ~~~~~v~~~s--~~--~~~l~~~~~dg~i~iw~~~~~-~--~~~~~~~~~~~v~~~~~~~~---~-----------~~l~  143 (444)
                      .|...|.+++  |.  |-.|++++.||.|.|.+++.. .  .......|.-.|++++|.|.   |           +.|+
T Consensus       100 ~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlv  179 (299)
T KOG1332|consen  100 AHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLV  179 (299)
T ss_pred             hhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceee
Confidence            8888888874  53  567999999999999998754 1  22246679999999999984   4           5799


Q ss_pred             EeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC----CEEEEEeCCceEEEEEcC
Q psy8152         144 TGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS----DKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~d~~i~i~d~~  217 (444)
                      +|+.|+.|+||+...++  .-.++.+|..                  +|+.++|.|.-    .+||+|+.||++.||-.+
T Consensus       180 SgGcDn~VkiW~~~~~~w~~e~~l~~H~d------------------wVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~  241 (299)
T KOG1332|consen  180 SGGCDNLVKIWKFDSDSWKLERTLEGHKD------------------WVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD  241 (299)
T ss_pred             ccCCccceeeeecCCcchhhhhhhhhcch------------------hhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence            99999999999998853  2344677777                  99999999964    689999999999999987


Q ss_pred             CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      .....-....+......+..+.||+.|++|++++.|+.+.+|.-..
T Consensus       242 ~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  242 EEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             CccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            2111112222334567799999999999999999999999997554

>KOG1273|consensus

Probab=99.96  E-value=4e-27  Score=193.88  Aligned_cols=284  Identities=13%  Similarity=0.074  Sum_probs=206.7

Q ss_pred             eEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152          45 VLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTEPDQWT  122 (444)
Q Consensus        45 v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~  122 (444)
                      ..|+.|+ +.|.+||+|+.+|.|.|||+.+...-+.+.  +|..+|.  ++|++|++|++++.|..|.+||+..|.+++ 
T Consensus        26 a~~~~Fs-~~G~~lAvGc~nG~vvI~D~~T~~iar~ls--aH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~-  101 (405)
T KOG1273|consen   26 AECCQFS-RWGDYLAVGCANGRVVIYDFDTFRIARMLS--AHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLK-  101 (405)
T ss_pred             cceEEec-cCcceeeeeccCCcEEEEEccccchhhhhh--ccccceeEEEecCCCCEeeeecCCceeEEEeccCCCcee-
Confidence            7899999 799999999999999999999998888886  5555555  557899999999999999999999999885 


Q ss_pred             ccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         123 NFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       123 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                      ......+|+.+.|+| +.+.+++.-.+..-.+-++..++  ++.         +..++++   .......+..|.+.|++
T Consensus       102 rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~--h~~---------Lp~d~d~---dln~sas~~~fdr~g~y  167 (405)
T KOG1273|consen  102 RIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK--HSV---------LPKDDDG---DLNSSASHGVFDRRGKY  167 (405)
T ss_pred             EEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCc--eee---------ccCCCcc---ccccccccccccCCCCE
Confidence            677889999999999 44444333333333344443211  111         1111111   11112334468999999


Q ss_pred             EEEEeCCceEEEEEcCCCCCccceEEEeCCC-CCeeEEEEccCCCEEEEEcCCCcEEEEEcCC---C-----CcceeEec
Q psy8152         202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-VALSCITTTNQSHYVIVGSTTGDMMAVDLRG---K-----GKPCYKYK  272 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~-----~~~~~~~~  272 (444)
                      +++|...|.+.+|+..   +..++..++... ..|..+.|+..|++|+..+.|+.||.|+++.   .     ..+.++++
T Consensus       168 IitGtsKGkllv~~a~---t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~q  244 (405)
T KOG1273|consen  168 IITGTSKGKLLVYDAE---TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQ  244 (405)
T ss_pred             EEEecCcceEEEEecc---hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHH
Confidence            9999999999999999   778888777665 7799999999999999999999999999873   0     12223333


Q ss_pred             c--ccCceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCceEEEee-cC-CceeEEEEcCCCcccccchhhhhccccccCC
Q psy8152         273 G--FAGCVKDIACPLNENLILSVS-LDRHFRVHDFHSKKLLRKDY-MQ-SRLTSILVRSDFSLENETKKEEQEHSEEKGD  347 (444)
Q Consensus       273 ~--h~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~  347 (444)
                      .  .+..=.+++|+.+|.|++.++ ....++||....|.+++.+. .+ .....+.|.+-.         ..+++. ..|
T Consensus       245 DvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~r---------p~i~si-~sg  314 (405)
T KOG1273|consen  245 DVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVR---------PIIASI-ASG  314 (405)
T ss_pred             HHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccce---------eeeeec-cCC
Confidence            1  223345778999999888776 34679999999999987765 22 335556666542         345544 678


Q ss_pred             CccccCCCcccc
Q psy8152         348 SDEKYDPEHFEM  359 (444)
Q Consensus       348 ~i~~W~~~~~~~  359 (444)
                      .+++|...+...
T Consensus       315 ~v~iw~~~~~en  326 (405)
T KOG1273|consen  315 VVYIWAVVQVEN  326 (405)
T ss_pred             ceEEEEeecccc
Confidence            999998775443

>KOG4283|consensus

Probab=99.96  E-value=4.6e-27  Score=191.77  Aligned_cols=292  Identities=13%  Similarity=0.164  Sum_probs=219.4

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCcc------ceeeeeeeccc---CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKC------IIKNIQNVKYI---TNKASVLALNWGNVEESELLIAYSGQKIKIYDTD   73 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~------~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~   73 (444)
                      ...+.++++|+.||.|.+||++....      +.+....+...   +|+-.|..+.|.|-+...+.+++.|.+++|||..
T Consensus        53 ~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtn  132 (397)
T KOG4283|consen   53 LTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTN  132 (397)
T ss_pred             cccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecc
Confidence            34568999999999999999976541      12222222222   7899999999998888999999999999999999


Q ss_pred             CCccccceeeccccccEEEEEe---CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152          74 FKNFNTNTDVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKEN  149 (444)
Q Consensus        74 ~~~~~~~~~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~  149 (444)
                      +.+....|...+ ..--.+++|   ...++|+|..+-.|++.|+.+|.+...+.+|.+.|.++.|+| ..-.|++|+.||
T Consensus       133 TlQ~a~~F~me~-~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg  211 (397)
T KOG4283|consen  133 TLQEAVDFKMEG-KVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADG  211 (397)
T ss_pred             cceeeEEeecCc-eeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCc
Confidence            988888776432 222234555   345788888999999999999999999999999999999999 556788999999


Q ss_pred             eEEEEEcCCc-eeeeeeecccceeeEeeeCCCc-ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152         150 DLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDE-FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       150 ~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  227 (444)
                      .|++||++.. .+...+..|..+     ..|.- ....+.+.|+.++|+.++.++++++.|..+++|+..   ++.....
T Consensus       212 ~irlWDiRrasgcf~~lD~hn~k-----~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~---~G~ntl~  283 (397)
T KOG4283|consen  212 AIRLWDIRRASGCFRVLDQHNTK-----RPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME---SGRNTLR  283 (397)
T ss_pred             eEEEEEeecccceeEEeecccCc-----cCccccccccccceeeeeeecccchhhhhccCccceEEeecc---cCccccc
Confidence            9999999984 566666655530     01110 133456689999999999999999999999999988   2221111


Q ss_pred             -E--eCCCCCeeEEEE---ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         228 -V--DIPDVALSCITT---TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       228 -~--~~~~~~i~~~~~---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                       +  ..|+.. ...++   +-+...++.--.++.+.++++-. +..+..+..|...|.+.++.|+-+.+.++..|+.|..
T Consensus       284 ~~g~~~~n~~-~~~~~~~~~~~s~vfv~~p~~~~lall~~~s-gs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~  361 (397)
T KOG4283|consen  284 EFGPIIHNQT-TSFAVHIQSMDSDVFVLFPNDGSLALLNLLE-GSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYM  361 (397)
T ss_pred             cccccccccc-ccceEEEeecccceEEEEecCCeEEEEEccC-ceEEEeeecccceeeEEeecCchhhhhccccCCcccc
Confidence             1  011111 11111   22233333334458899999999 9999999999889999999999899999999999999


Q ss_pred             EEcC
Q psy8152         302 HDFH  305 (444)
Q Consensus       302 w~~~  305 (444)
                      |-..
T Consensus       362 w~p~  365 (397)
T KOG4283|consen  362 WSPA  365 (397)
T ss_pred             cccc
Confidence            9763

>KOG0264|consensus

Probab=99.96  E-value=2.8e-27  Score=204.09  Aligned_cols=243  Identities=14%  Similarity=0.200  Sum_probs=195.3

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceee----eeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc-
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKN----IQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF-   77 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~-   77 (444)
                      +.+..+|++++..+.|+||+..+.......    ...+...+|...=++|+|++....+|++|+.|++|++||+..... 
T Consensus       134 PQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~  213 (422)
T KOG0264|consen  134 PQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKE  213 (422)
T ss_pred             CCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccC
Confidence            567789999999999999998665432111    112233389988899999987788999999999999999964332 


Q ss_pred             ----ccceeeccccccEEEEE--e-CCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeEEEEEec-cCCEEEEeeC
Q psy8152          78 ----NTNTDVSFGEGDIVGVS--R-YDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLECMKHNK-HSNIIATGGK  147 (444)
Q Consensus        78 ----~~~~~~~~~~~~v~~~s--~-~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  147 (444)
                          ......++|...|..++  + +..+|++++.|+.+.|||++  +.++.....+|.++|+|++|+| ++.+||+|+.
T Consensus       214 ~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~  293 (422)
T KOG0264|consen  214 DKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSA  293 (422)
T ss_pred             CccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccC
Confidence                23334568888887664  3 46789999999999999999  4555556778999999999999 8899999999


Q ss_pred             CCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCC-----
Q psy8152         148 ENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITT-----  220 (444)
Q Consensus       148 d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-----  220 (444)
                      |++|++||+|+ .+++.++.+|..                  .|.+|.|+|.. ..||+++.|+.+.+||+..-+     
T Consensus       294 D~tV~LwDlRnL~~~lh~~e~H~d------------------ev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~  355 (422)
T KOG0264|consen  294 DKTVALWDLRNLNKPLHTFEGHED------------------EVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSP  355 (422)
T ss_pred             CCcEEEeechhcccCceeccCCCc------------------ceEEEEeCCCCCceeEecccCCcEEEEeccccccccCh
Confidence            99999999998 567888888887                  89999999987 889999999999999997211     


Q ss_pred             ------CccceEEEeCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCC
Q psy8152         221 ------QRRPVLKVDIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       221 ------~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~  263 (444)
                            ....++.-.+|...|..+.|+|+.. .|++.+.|+.+.||.+..
T Consensus       356 eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  356 EDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             hhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence                  1223455668999999999999855 566799999999999863

>KOG1539|consensus

Probab=99.96  E-value=4.4e-26  Score=210.15  Aligned_cols=339  Identities=14%  Similarity=0.183  Sum_probs=237.9

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeee-eecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQ-NVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +.+++++..++.|.+|+....+... .++ .+....+.. |+++.--+..-+.++.|+..|.++||++.+++.+.+++  
T Consensus       124 Ge~lia~d~~~~l~vw~~s~~~~e~-~l~~~~~~~~~~~-Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~--  199 (910)
T KOG1539|consen  124 GEHLIAVDISNILFVWKTSSIQEEL-YLQSTFLKVEGDF-ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQ--  199 (910)
T ss_pred             cceEEEEEccCcEEEEEeccccccc-cccceeeeccCCc-eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEec--
Confidence            4578888999999999998853211 111 111113333 88876432344778999999999999999999999986  


Q ss_pred             cccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCcccccccc-CCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCCce
Q psy8152          85 FGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFNV-GPQLECMKHNKHSN-IIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        85 ~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~  160 (444)
                      ++...|+++-  |-=..++.|..+|+|.+++++.++.+. .+.| .++|++++|.-||+ ++++|+..|.+.+||+...+
T Consensus       200 ~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~-sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kk  278 (910)
T KOG1539|consen  200 EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILM-SFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKK  278 (910)
T ss_pred             ccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEE-EEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCe
Confidence            5678899984  555779999999999999999999885 5556 59999999998775 56677777999999999888


Q ss_pred             eeeeee-cccceeeEeeeCCC-------cccccCccceeEEEEecCC-------------------------CEEEEEeC
Q psy8152         161 NIFSAK-NVSHRVLVYSVKPD-------EFDLRRPVWVNGISFLPNS-------------------------DKVAVCSK  207 (444)
Q Consensus       161 ~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~-------------------------~~l~~~~~  207 (444)
                      .+..+. .|...+....+-|.       +.+.....||..   +++|                         ..+.+++.
T Consensus       279 l~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD---~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~  355 (910)
T KOG1539|consen  279 LINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFD---SGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQ  355 (910)
T ss_pred             eeeeeeccccCCcccceecCCCceEeeccCCCceeEEEee---CCCCcchheeeccCCCCCchheeeeccCcEEEEeccc
Confidence            776666 44342222222221       112222222222   1111                         12334444


Q ss_pred             CceEEEEEcCC------CCC-------------------ccceEEE----------------------------------
Q psy8152         208 QGYVRVYDPKI------TTQ-------------------RRPVLKV----------------------------------  228 (444)
Q Consensus       208 d~~i~i~d~~~------~~~-------------------~~~~~~~----------------------------------  228 (444)
                      |++++.+++..      ..+                   ..++..+                                  
T Consensus       356 Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G  435 (910)
T KOG1539|consen  356 DRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSG  435 (910)
T ss_pred             CcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccc
Confidence            44444443310      000                   0000000                                  


Q ss_pred             ----e-----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe---ccccCceeEEEecCCCCEEEEEECC
Q psy8152         229 ----D-----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY---KGFAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       229 ----~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                          .     .....+++++.++.|++.+.|+..|.|-+|++++ |-...++   +.|.++|++++....++.+++++.+
T Consensus       436 ~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQS-Gi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~  514 (910)
T KOG1539|consen  436 RHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQS-GIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGAD  514 (910)
T ss_pred             cEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEccc-CeeecccccCccccCceeEEEecCCCceEEEccCc
Confidence                0     0124578899999999999999999999999999 9888888   4899999999999888999999999


Q ss_pred             CcEEEEEcCCCceEEEee------------------------------------------cCCceeEEEEcCCCcccccc
Q psy8152         297 RHFRVHDFHSKKLLRKDY------------------------------------------MQSRLTSILVRSDFSLENET  334 (444)
Q Consensus       297 g~i~vw~~~~~~~~~~~~------------------------------------------~~~~i~~~~~~~~~~~~~~~  334 (444)
                      |.+++|++....++..+.                                          |.++|+.+.|+         
T Consensus       515 Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS---------  585 (910)
T KOG1539|consen  515 GILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFS---------  585 (910)
T ss_pred             ceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeC---------
Confidence            999999998765333322                                          44556666655         


Q ss_pred             hhhhhccccccCCCccccCCCccccccc
Q psy8152         335 KKEEQEHSEEKGDSDEKYDPEHFEMNQV  362 (444)
Q Consensus       335 ~~~~~~~s~~~d~~i~~W~~~~~~~~~~  362 (444)
                      |+++.+++++.|++||+||+.++.+...
T Consensus       586 ~DgrWlisasmD~tIr~wDlpt~~lID~  613 (910)
T KOG1539|consen  586 PDGRWLISASMDSTIRTWDLPTGTLIDG  613 (910)
T ss_pred             CCCcEEEEeecCCcEEEEeccCcceeee
Confidence            6689999999999999999998776543

>KOG2106|consensus

Probab=99.96  E-value=5.4e-26  Score=198.32  Aligned_cols=317  Identities=15%  Similarity=0.137  Sum_probs=239.9

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      -.+..+++|.++|.|.||+....+.      ..+.+.|.+.|.+++.. .++ .|++|+.|..|..|| ..-+.++..++
T Consensus       255 ~engdviTgDS~G~i~Iw~~~~~~~------~k~~~aH~ggv~~L~~l-r~G-tllSGgKDRki~~Wd-~~y~k~r~~el  325 (626)
T KOG2106|consen  255 LENGDVITGDSGGNILIWSKGTNRI------SKQVHAHDGGVFSLCML-RDG-TLLSGGKDRKIILWD-DNYRKLRETEL  325 (626)
T ss_pred             cCCCCEEeecCCceEEEEeCCCceE------EeEeeecCCceEEEEEe-cCc-cEeecCccceEEecc-ccccccccccC
Confidence            4567899999999999999866652      11222899999999998 444 566699999999999 45555666677


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      +...+++..+.+.+.-|++|...+.|..=.+.++..+ ..++|....+.++.+|..+++++++.|+.+++|+  ..++..
T Consensus       326 Pe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~-~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~w  402 (626)
T KOG2106|consen  326 PEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTL-TVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEW  402 (626)
T ss_pred             chhcCCeeEEecCCCcEEEeeccceEEEeeecCCceE-EEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeE
Confidence            7778999999887655888988888888788877666 5889999999999999999999999999999999  455555


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      +.....                   ++.|+.|+|.| .+|.|+..|...+.|..   + +.+.++.....++++++|+|+
T Consensus       403 t~~~~d-------------------~~~~~~fhpsg-~va~Gt~~G~w~V~d~e---~-~~lv~~~~d~~~ls~v~ysp~  458 (626)
T KOG2106|consen  403 TKIIED-------------------PAECADFHPSG-VVAVGTATGRWFVLDTE---T-QDLVTIHTDNEQLSVVRYSPD  458 (626)
T ss_pred             EEEecC-------------------ceeEeeccCcc-eEEEeeccceEEEEecc---c-ceeEEEEecCCceEEEEEcCC
Confidence            544333                   58999999999 99999999999999998   4 444445555889999999999


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCce--e
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL--T  320 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i--~  320 (444)
                      |.+||.|+.|+.|+||-+...+....... .|.++|+.+.|++|+++|.+.+-|-.|..|....-+.+.....-...  +
T Consensus       459 G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~  538 (626)
T KOG2106|consen  459 GAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYT  538 (626)
T ss_pred             CCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeE
Confidence            99999999999999999987455444443 24489999999999999999999999999943332222211100000  0


Q ss_pred             -EEEE-------cCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         321 -SILV-------RSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       321 -~~~~-------~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                       .+-|       ..+....+.....++++++.+.|.|+++...=
T Consensus       539 c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc  582 (626)
T KOG2106|consen  539 CTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPC  582 (626)
T ss_pred             EEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEcccc
Confidence             0001       01111111224457889999999999997653

>KOG4283|consensus

Probab=99.96  E-value=1.7e-26  Score=188.52  Aligned_cols=286  Identities=15%  Similarity=0.190  Sum_probs=220.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc------ccce-------eeccccccEEEEE--e-CCCeEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF------NTNT-------DVSFGEGDIVGVS--R-YDECILTA  103 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~------~~~~-------~~~~~~~~v~~~s--~-~~~~l~~~  103 (444)
                      .|.+.|.++...+..++++++|+.||.|.|||++....      +..-       .-.+|.-.|..+.  | +..++.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            79999999999988899999999999999999975431      1110       1124555565543  3 66789999


Q ss_pred             ecCCcEEEEEcCCCCccccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152         104 VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       104 ~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (444)
                      +.|.+++|||..+.+... .+...+.|++-+++|   ...++|+|..+-.|++.|+..|...+.+.+|..          
T Consensus       121 SFDhtlKVWDtnTlQ~a~-~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~----------  189 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQEAV-DFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRD----------  189 (397)
T ss_pred             cccceEEEeecccceeeE-EeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccC----------
Confidence            999999999999988774 677788999999999   356788889999999999999999999999998          


Q ss_pred             cccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCC-----------CCccce-EEEeCCCCCeeEEEEccCCCEE
Q psy8152         181 EFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKIT-----------TQRRPV-LKVDIPDVALSCITTTNQSHYV  247 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-----------~~~~~~-~~~~~~~~~i~~~~~~~~~~~l  247 (444)
                              .|.++.|+|.. -.|++|+.||.|++||++..           ....++ .+-..|.+.+..++|+.++.++
T Consensus       190 --------~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l  261 (397)
T KOG4283|consen  190 --------GVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYL  261 (397)
T ss_pred             --------ceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhh
Confidence                    79999999988 45779999999999999821           011111 1234577889999999999999


Q ss_pred             EEEcCCCcEEEEEcCCCCcc-eeEec--cccCce---eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee
Q psy8152         248 IVGSTTGDMMAVDLRGKGKP-CYKYK--GFAGCV---KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT  320 (444)
Q Consensus       248 ~~~~~dg~i~iwd~~~~~~~-~~~~~--~h~~~i---~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~  320 (444)
                      ++++.|..+++|+..+ +.. +..+-  .|...+   ..+. +.+...++-.-.++.+.++++-.+..+..+. |...+.
T Consensus       262 ~~~gtd~r~r~wn~~~-G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~  339 (397)
T KOG4283|consen  262 ASCGTDDRIRVWNMES-GRNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRIN  339 (397)
T ss_pred             hhccCccceEEeeccc-CcccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeecccceee
Confidence            9999999999999987 432 22221  122111   1122 3334455555567899999999999988876 777899


Q ss_pred             EEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      |.++.++|         ..+.++..|+.+..|-..
T Consensus       340 c~~~~~~f---------q~~~tg~~d~ni~~w~p~  365 (397)
T KOG4283|consen  340 CAAYRPDF---------EQCFTGDMNGNIYMWSPA  365 (397)
T ss_pred             EEeecCch---------hhhhccccCCcccccccc
Confidence            99999886         467889999999999763

>KOG0269|consensus

Probab=99.96  E-value=1.8e-27  Score=217.56  Aligned_cols=262  Identities=17%  Similarity=0.256  Sum_probs=202.3

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec--cccccEE---EE---EeCCCeEEEEecCCcEEEEE
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS--FGEGDIV---GV---SRYDECILTAVKSGDVKLWR  113 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~--~~~~~v~---~~---s~~~~~l~~~~~dg~i~iw~  113 (444)
                      .....+|... ++-..|+.++. ..++||.+............  .......   .+   ..+.++||+++..|.|.+||
T Consensus        39 k~~~nAIs~n-r~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd  116 (839)
T KOG0269|consen   39 KAKANAISVN-RDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD  116 (839)
T ss_pred             ccccceEeec-CCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence            4556777777 67788888877 57888877543322221111  1111111   11   34568899999999999999


Q ss_pred             cCC---CCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         114 YKT---EPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       114 ~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      +..   .+.+..+..|...++++.|++ ..++|++|+.||+|++||++..+...++.+...                  .
T Consensus       117 lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSE------------------S  178 (839)
T KOG0269|consen  117 LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSE------------------S  178 (839)
T ss_pred             cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccch------------------h
Confidence            987   455556778999999999999 889999999999999999999888877777555                  6


Q ss_pred             eeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC-Ccc
Q psy8152         190 VNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK-GKP  267 (444)
Q Consensus       190 i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~  267 (444)
                      |+.|+|+|.. ..|+++...|.+++||+|  ...++...+..|.++|.|+.|+|++.+||+|+.|+.|+||++..+ .++
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlR--qp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~  256 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGYLQLWDLR--QPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKP  256 (839)
T ss_pred             hhceeeccCCCceEEEecCCceEEEeecc--CchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccc
Confidence            9999999865 889999999999999999  566788889999999999999999999999999999999999851 234


Q ss_pred             eeEeccccCceeEEEecCCCC-EEEEEE--CCCcEEEEEcCCC-ceEEEee-cCCceeEEEEcC
Q psy8152         268 CYKYKGFAGCVKDIACPLNEN-LILSVS--LDRHFRVHDFHSK-KLLRKDY-MQSRLTSILVRS  326 (444)
Q Consensus       268 ~~~~~~h~~~i~~~~~s~~~~-~l~s~~--~dg~i~vw~~~~~-~~~~~~~-~~~~i~~~~~~~  326 (444)
                      +.++. -..+|.+++|-|..+ .||+++  .|..|+|||++.. -+..++. |...++.++|..
T Consensus       257 ~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~  319 (839)
T KOG0269|consen  257 KHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDS  319 (839)
T ss_pred             eeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccC
Confidence            44443 356899999999875 566654  5788999999763 3333333 788888888865

>KOG0269|consensus

Probab=99.96  E-value=1.6e-27  Score=217.92  Aligned_cols=276  Identities=16%  Similarity=0.178  Sum_probs=214.0

Q ss_pred             cccEEEecCCCcEEEEEcCCCccce-eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC---Cccccce
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCII-KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF---KNFNTNT   81 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~---~~~~~~~   81 (444)
                      ..+|++++.. .++||.+....... .++..-....-.-.+..|.|..-..++|||++..|.|.+||+..   .+.+..|
T Consensus        51 ~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f  129 (839)
T KOG0269|consen   51 INQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVF  129 (839)
T ss_pred             cceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHh
Confidence            3455655544 77888776544211 11111111112234566778755678999999999999999976   4455555


Q ss_pred             eeccccccEEEEEe---CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcC
Q psy8152          82 DVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        82 ~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~  157 (444)
                      .  .|...+.++.+   ...+|++|+.||+|++||++..+...++++....|..+.|+| .+..|+++...|.+++||++
T Consensus       130 ~--EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR  207 (839)
T KOG0269|consen  130 N--EHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLR  207 (839)
T ss_pred             h--hhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeecc
Confidence            4  77777777643   467899999999999999999888888888899999999999 88999999999999999999


Q ss_pred             C-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         158 T-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       158 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                      . .++...+..|.+                  +|.|+.|+|++.+||+|+.|+.|+||+.. +....++.++. ...++.
T Consensus       208 qp~r~~~k~~AH~G------------------pV~c~nwhPnr~~lATGGRDK~vkiWd~t-~~~~~~~~tIn-Tiapv~  267 (839)
T KOG0269|consen  208 QPDRCEKKLTAHNG------------------PVLCLNWHPNREWLATGGRDKMVKIWDMT-DSRAKPKHTIN-TIAPVG  267 (839)
T ss_pred             CchhHHHHhhcccC------------------ceEEEeecCCCceeeecCCCccEEEEecc-CCCccceeEEe-ecceee
Confidence            8 456677777777                  89999999999999999999999999998 44555555554 456899


Q ss_pred             EEEEccCCCE-EEEEc--CCCcEEEEEcCCCCcceeEeccccCceeEEEecC-CCCEEEEEECCCcEEEEEc
Q psy8152         237 CITTTNQSHY-VIVGS--TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL-NENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       237 ~~~~~~~~~~-l~~~~--~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~  304 (444)
                      ++.|-|...+ |++++  .|-.|+|||++.|.-|..++..|...++.++|.. +...|.+++.||+|..-.+
T Consensus       268 rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~  339 (839)
T KOG0269|consen  268 RVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLF  339 (839)
T ss_pred             eeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhh
Confidence            9999998654 55544  4668999999998888999999999999999965 3458899999998865443

>KOG2096|consensus

Probab=99.96  E-value=2.7e-26  Score=189.31  Aligned_cols=282  Identities=12%  Similarity=0.110  Sum_probs=210.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~  113 (444)
                      +|.+.|++|+|+ .+|++|++++.|+.|+||++..-.     +++. ...........|+|+-+- ++++-...++++|.
T Consensus        84 gH~~~vt~~~Fs-SdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk  161 (420)
T KOG2096|consen   84 GHKKEVTDVAFS-SDGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYK  161 (420)
T ss_pred             ccCCceeeeEEc-CCCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccCCCceEEEECCCcceEEEEEccCCEEEEEE
Confidence            899999999999 899999999999999999986422     1111 112224455677888665 44455566899998


Q ss_pred             cCCCCc---cc---------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         114 YKTEPD---QW---------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       114 ~~~~~~---~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      +...+-   ..         ....|.-.|..+-...++.+|++++.|..|.+|+++ |+.+..+.....           
T Consensus       162 ~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~-----------  229 (420)
T KOG2096|consen  162 LVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQS-----------  229 (420)
T ss_pred             eeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccc-----------
Confidence            653221   10         122356667777777788999999999999999999 888877765554           


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-----CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcE
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-----TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDM  256 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  256 (444)
                             .-+..+.+|+|++|++++..--|++|.+--+     ..-..++.+.+|...|..++|+|+...+++.+.||++
T Consensus       230 -------~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~w  302 (420)
T KOG2096|consen  230 -------SNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKW  302 (420)
T ss_pred             -------cccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcE
Confidence                   4677889999999999999999999987511     1234567789999999999999999999999999999


Q ss_pred             EEEEcCC------CCcceeEec----cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee--cCCceeEEEE
Q psy8152         257 MAVDLRG------KGKPCYKYK----GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY--MQSRLTSILV  324 (444)
Q Consensus       257 ~iwd~~~------~~~~~~~~~----~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~  324 (444)
                      +|||+.-      ..+.+.+..    ...+.-..+.++|.|+.||.+ ....|++|...+++....+.  |...|.+++|
T Consensus       303 riwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~  381 (420)
T KOG2096|consen  303 RIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISY  381 (420)
T ss_pred             EEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEe
Confidence            9999753      022333332    122334489999999988764 45679999999998877765  8999999998


Q ss_pred             cCCCcccccchhhhhccccccCCCccccC
Q psy8152         325 RSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       325 ~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .++         +++++|++ |+-+++..
T Consensus       382 ~~~---------g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  382 SSD---------GKYIATCG-DRYVRVIR  400 (420)
T ss_pred             cCC---------CcEEeeec-ceeeeeec
Confidence            854         67888775 45555553

>KOG2445|consensus

Probab=99.95  E-value=3.4e-26  Score=187.83  Aligned_cols=280  Identities=14%  Similarity=0.136  Sum_probs=203.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--CCccccceeeccccccEEEEE---e-CCCeEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTD--FKNFNTNTDVSFGEGDIVGVS---R-YDECILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~s---~-~~~~l~~~~~dg~i~iw~  113 (444)
                      +|..-|.++.|. +.|+++|+|+.|++|+|||..  ++....+-....|.+.|..+.   | .|+.+|+++.|+++.||.
T Consensus        11 ~h~DlihdVs~D-~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   11 GHKDLIHDVSFD-FYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             CCcceeeeeeec-ccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            899999999999 799999999999999999964  344444445567888888874   3 589999999999999997


Q ss_pred             cCC--CC-------ccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152         114 YKT--EP-------DQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       114 ~~~--~~-------~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      -..  .+       ...++......|+.+.|.|  -|-.||+++.||.||||+.-..-.+........ +..+.. |.  
T Consensus        90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~E-i~~~~~-pp--  165 (361)
T KOG2445|consen   90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHE-IQNVID-PP--  165 (361)
T ss_pred             ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhh-hhhccC-Cc--
Confidence            521  11       1114555678899999999  788999999999999998765322222211111 000000 11  


Q ss_pred             cccCccceeEEEEecCC---CEEEEEeCC-----ceEEEEEcCCCC-CccceEEEeCCCCCeeEEEEccC----CCEEEE
Q psy8152         183 DLRRPVWVNGISFLPNS---DKVAVCSKQ-----GYVRVYDPKITT-QRRPVLKVDIPDVALSCITTTNQ----SHYVIV  249 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~---~~l~~~~~d-----~~i~i~d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~  249 (444)
                       .+...+..|+.|+|..   .+||+|+.+     +.+.||...... ....+.++..|..+|+.|+|.|+    -.+||+
T Consensus       166 -~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAv  244 (361)
T KOG2445|consen  166 -GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAV  244 (361)
T ss_pred             -ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEE
Confidence             1112357899999754   678888776     478888876222 44566678899999999999996    357899


Q ss_pred             EcCCCcEEEEEcCC-------------------CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC---C
Q psy8152         250 GSTTGDMMAVDLRG-------------------KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS---K  307 (444)
Q Consensus       250 ~~~dg~i~iwd~~~-------------------~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~---~  307 (444)
                      ++.|| |+||.+..                   +-+.+..+..|++.|..+.|+-.|..|++.|.||.||+|...-   .
T Consensus       245 A~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~  323 (361)
T KOG2445|consen  245 ATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLW  323 (361)
T ss_pred             eecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhh
Confidence            99999 99999873                   1134455668999999999999999999999999999997653   3


Q ss_pred             ceEEEeecCCceeEEEEcC
Q psy8152         308 KLLRKDYMQSRLTSILVRS  326 (444)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~  326 (444)
                      ++...+...+.+....+..
T Consensus       324 kC~sv~~~e~~~~~~~~~~  342 (361)
T KOG2445|consen  324 KCTSVLKAEGSVTKPDFSQ  342 (361)
T ss_pred             eeeeEEeccCCCCCccccc
Confidence            4444555555554444443

>KOG0321|consensus

Probab=99.95  E-value=2.8e-26  Score=205.45  Aligned_cols=294  Identities=12%  Similarity=0.138  Sum_probs=213.7

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ..++|+++..+|.|.+++..........-+...-+.|..+|..+.|. |....|++++.|.++++||+.+.++...-.+.
T Consensus        63 ~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wa-pge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~  141 (720)
T KOG0321|consen   63 KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWA-PGESLLVSASGDSTIRPWDVKTSRLVGGRLNL  141 (720)
T ss_pred             ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccC-CCceeEEEccCCceeeeeeeccceeecceeec
Confidence            45889999999999999987665321111122223899999999999 67889999999999999999999888774445


Q ss_pred             cccccEEE--EEe-CCCeEEEEecCCcEEEEEcCCCC--------------------c-------cccccccCCCeEE--
Q psy8152          85 FGEGDIVG--VSR-YDECILTAVKSGDVKLWRYKTEP--------------------D-------QWTNFNVGPQLEC--  132 (444)
Q Consensus        85 ~~~~~v~~--~s~-~~~~l~~~~~dg~i~iw~~~~~~--------------------~-------~~~~~~~~~~v~~--  132 (444)
                      +|...+.+  |.+ +...|++|+.||.|.|||++-..                    .       +.....+...|.+  
T Consensus       142 GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssv  221 (720)
T KOG0321|consen  142 GHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSV  221 (720)
T ss_pred             ccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeee
Confidence            88777754  556 45679999999999999976322                    0       0012223344444  


Q ss_pred             -EEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce
Q psy8152         133 -MKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY  210 (444)
Q Consensus       133 -~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  210 (444)
                       +.+..|...||+++. |+.|+|||+++............    ..+..   .......+.++.....|.+|++.+.|+.
T Consensus       222 Tvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~----~~~~t---~skrs~G~~nL~lDssGt~L~AsCtD~s  294 (720)
T KOG0321|consen  222 TVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGS----DKYPT---HSKRSVGQVNLILDSSGTYLFASCTDNS  294 (720)
T ss_pred             EEEEEeccceeeeccCCCcceEEEeecccccccccCCCcc----cCccC---cccceeeeEEEEecCCCCeEEEEecCCc
Confidence             445568889999888 99999999998665443321111    00000   0011224778888778888887778999


Q ss_pred             EEEEEcCCCCCccceEEEeCCCCC--eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-
Q psy8152         211 VRVYDPKITTQRRPVLKVDIPDVA--LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-  287 (444)
Q Consensus       211 i~i~d~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-  287 (444)
                      |++|++. +....++..+.++...  -..-..+|++.+|++|+.|...++|.+.++..+...+.+|...|++++|.|.. 
T Consensus       295 Iy~ynm~-s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~  373 (720)
T KOG0321|consen  295 IYFYNMR-SLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSAT  373 (720)
T ss_pred             EEEEecc-ccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccC
Confidence            9999999 5555666655554321  12234689999999999999999999998677788888999999999998754 


Q ss_pred             CEEEEEECCCcEEEEEcCCC
Q psy8152         288 NLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       288 ~~l~s~~~dg~i~vw~~~~~  307 (444)
                      .-+++++.|-+++||++..+
T Consensus       374 t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  374 TPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             CCceeeccCcceEEEeccCc
Confidence            35677799999999999664

>KOG0646|consensus

Probab=99.95  E-value=1.7e-26  Score=199.78  Aligned_cols=253  Identities=13%  Similarity=0.144  Sum_probs=207.9

Q ss_pred             ccEEEe-cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           7 YNIYIG-SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         7 ~~l~~g-~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      .+++++ .....|.+|.+.......      +.+--.++|.|++-+ |.|.+|+.|+..|.|++|.+.+|.++..+.  +
T Consensus        51 ~yllsaq~~rp~l~vw~i~k~~~~~------q~~v~Pg~v~al~s~-n~G~~l~ag~i~g~lYlWelssG~LL~v~~--a  121 (476)
T KOG0646|consen   51 EYLLSAQLKRPLLHVWEILKKDQVV------QYIVLPGPVHALASS-NLGYFLLAGTISGNLYLWELSSGILLNVLS--A  121 (476)
T ss_pred             hheeeecccCccccccccCchhhhh------hhcccccceeeeecC-CCceEEEeecccCcEEEEEeccccHHHHHH--h
Confidence            344444 456788999987665321      111347899999999 799999999899999999999999999985  6


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcC---------CCCccccccccCCCeEEEEEec--cCCEEEEeeCCCeEE
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYK---------TEPDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLK  152 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~---------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~  152 (444)
                      |-..|+++  +-|+.+|++|+.||.|.+|.+.         +.++...+..|.-+|+.+...+  ...+|++++.|.+++
T Consensus       122 HYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k  201 (476)
T KOG0646|consen  122 HYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK  201 (476)
T ss_pred             hccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence            66666665  6789999999999999999864         2344556778999999999877  456899999999999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC------------
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT------------  220 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------------  220 (444)
                      +||+..+..+.++.....                   +.+++..|-...+++|+.+|.|.+.++....            
T Consensus       202 ~wdlS~g~LLlti~fp~s-------------------i~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~  262 (476)
T KOG0646|consen  202 LWDLSLGVLLLTITFPSS-------------------IKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRH  262 (476)
T ss_pred             EEEeccceeeEEEecCCc-------------------ceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccc
Confidence            999999998887765544                   9999999999999999999999999886211            


Q ss_pred             -CccceEEEeCCCC--CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC
Q psy8152         221 -QRRPVLKVDIPDV--ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN  288 (444)
Q Consensus       221 -~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~  288 (444)
                       ....+..+.+|..  .|+|++++-+|.+|++|+.||.++|||+.+ .++++++....++|+.+.+.|-.+
T Consensus       263 ~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S-~Q~iRtl~~~kgpVtnL~i~~~~~  332 (476)
T KOG0646|consen  263 EENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYS-KQCIRTLQTSKGPVTNLQINPLER  332 (476)
T ss_pred             cccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecch-HHHHHHHhhhccccceeEeecccc
Confidence             1233455678877  999999999999999999999999999999 999999986789999999977544

>KOG1274|consensus

Probab=99.95  E-value=5.3e-26  Score=211.84  Aligned_cols=269  Identities=14%  Similarity=0.122  Sum_probs=211.7

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .++.+|++++.+|.|++|+.......+..+.     -|...|.+++..   .++|++|+.+++|.+|.+..++.-..+.-
T Consensus        23 ~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~-----~~g~~v~~ia~~---s~~f~~~s~~~tv~~y~fps~~~~~iL~R   94 (933)
T KOG1274|consen   23 PDGEFICTCGSDGDIRKWKTNSDEEEPETID-----ISGELVSSIACY---SNHFLTGSEQNTVLRYKFPSGEEDTILAR   94 (933)
T ss_pred             CCCCEEEEecCCCceEEeecCCcccCCchhh-----ccCceeEEEeec---ccceEEeeccceEEEeeCCCCCccceeee
Confidence            4567999999999999999766521111111     267888888866   67999999999999999987765544332


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      ..-...+++++.+|+++|.|+.|-.|++.++........+.+|.++|.++.|+|++++||+.+.||.|++|++..+.+..
T Consensus        95 ftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~  174 (933)
T KOG1274|consen   95 FTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK  174 (933)
T ss_pred             eeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh
Confidence            23356677788899999999999999999999888887899999999999999999999999999999999999988877


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEc
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTT  241 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~  241 (444)
                      ++.+.........          ...+..++|+|++..|++.+.|+.|++|+..   .....+.+.  .+...+..+.|+
T Consensus       175 tl~~v~k~n~~~~----------s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~---~we~~f~Lr~~~~ss~~~~~~ws  241 (933)
T KOG1274|consen  175 TLTGVDKDNEFIL----------SRICTRLAWHPKGGTLAVPPVDNTVKVYSRK---GWELQFKLRDKLSSSKFSDLQWS  241 (933)
T ss_pred             hcccCCccccccc----------cceeeeeeecCCCCeEEeeccCCeEEEEccC---CceeheeecccccccceEEEEEc
Confidence            7765443111110          2247889999999888889999999999998   565555554  345558999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCc
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH  298 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~  298 (444)
                      |+|+|||+++.+|.|.|||..+ -..    ......|++++|.|+.+.|-.-...|.
T Consensus       242 PnG~YiAAs~~~g~I~vWnv~t-~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~  293 (933)
T KOG1274|consen  242 PNGKYIAASTLDGQILVWNVDT-HER----HEFKRAVCCEAWKPNANAITLITALGT  293 (933)
T ss_pred             CCCcEEeeeccCCcEEEEeccc-chh----ccccceeEEEecCCCCCeeEEEeeccc
Confidence            9999999999999999999986 222    223568999999999876654444443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.95  E-value=5.5e-25  Score=198.45  Aligned_cols=273  Identities=14%  Similarity=0.073  Sum_probs=203.4

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCccccccccCCCeEEEE
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMK  134 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~  134 (444)
                      ..+++++.|+.|++|++.+++.+..+.... .....+++|+++.+ ++++.++.|++|++.+++....+..+ ..+..++
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~   79 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSG-PDPELFA   79 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCC-CCccEEE
Confidence            578899999999999999998887775322 23346678898876 56678899999999988776534333 3457889


Q ss_pred             EeccCCEEEEe-eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-eEE
Q psy8152         135 HNKHSNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-YVR  212 (444)
Q Consensus       135 ~~~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~  212 (444)
                      |+|+++.++++ +.++.|++||+.+.+.+..+....                   .+.+++|+|++++++++..++ .+.
T Consensus        80 ~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~-------------------~~~~~~~~~dg~~l~~~~~~~~~~~  140 (300)
T TIGR03866        80 LHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGV-------------------EPEGMAVSPDGKIVVNTSETTNMAH  140 (300)
T ss_pred             ECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCC-------------------CcceEEECCCCCEEEEEecCCCeEE
Confidence            99998877654 568999999999877766654322                   367899999999999888765 567


Q ss_pred             EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEecccc-----C--ceeEEEec
Q psy8152         213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKGFA-----G--CVKDIACP  284 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~h~-----~--~i~~~~~s  284 (444)
                      +||..   ....+..+... ..+.+++|+|++++|+++ ..++.|++||+.+ ++.+..+..+.     .  ....++|+
T Consensus       141 ~~d~~---~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~s  215 (300)
T TIGR03866       141 FIDTK---TYEIVDNVLVD-QRPRFAEFTADGKELWVSSEIGGTVSVIDVAT-RKVIKKITFEIPGVHPEAVQPVGIKLT  215 (300)
T ss_pred             EEeCC---CCeEEEEEEcC-CCccEEEECCCCCEEEEEcCCCCEEEEEEcCc-ceeeeeeeecccccccccCCccceEEC
Confidence            78987   45444444332 345789999999988654 5689999999998 87776664221     1  23468899


Q ss_pred             CCCCEEEE-EECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcccc-ccCCCccccCCCccccccc
Q psy8152         285 LNENLILS-VSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSE-EKGDSDEKYDPEHFEMNQV  362 (444)
Q Consensus       285 ~~~~~l~s-~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~-~~d~~i~~W~~~~~~~~~~  362 (444)
                      |+++++++ .+.++.|.+||+.+++.+..+.+...+.+++|+++         +.+++++ +.++.|++|++..++....
T Consensus       216 ~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~---------g~~l~~~~~~~~~i~v~d~~~~~~~~~  286 (300)
T TIGR03866       216 KDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPD---------EKYLLTTNGVSNDVSVIDVAALKVIKS  286 (300)
T ss_pred             CCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCC---------CCEEEEEcCCCCeEEEEECCCCcEEEE
Confidence            99997554 45567899999999988877666777888888754         4566654 5789999999998776443


Q ss_pred             c
Q psy8152         363 T  363 (444)
Q Consensus       363 ~  363 (444)
                      .
T Consensus       287 ~  287 (300)
T TIGR03866       287 I  287 (300)
T ss_pred             E
Confidence            3

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0270|consensus

Probab=99.95  E-value=3.1e-26  Score=196.93  Aligned_cols=247  Identities=17%  Similarity=0.201  Sum_probs=191.6

Q ss_pred             cceEEEeeec------cCCcEEEEEEcCCeEEEEeCCCCc-------------------cccceeeccccccEEEEEeCC
Q psy8152          43 ASVLALNWGN------VEESELLIAYSGQKIKIYDTDFKN-------------------FNTNTDVSFGEGDIVGVSRYD   97 (444)
Q Consensus        43 ~~v~~~~~~~------~~~~~l~~~~~d~~i~vw~~~~~~-------------------~~~~~~~~~~~~~v~~~s~~~   97 (444)
                      ....|++|.-      ..++++|.|+.+..|.|||+.-..                   ..+.+...+|+..|.+++++.
T Consensus       174 afPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~  253 (463)
T KOG0270|consen  174 AFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR  253 (463)
T ss_pred             CcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc
Confidence            3446777751      136799999999999999975211                   011122346788888887654


Q ss_pred             ---CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCce-eeeeeeccccee
Q psy8152          98 ---ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRV  172 (444)
Q Consensus        98 ---~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~  172 (444)
                         +.||+|+.|.+|++||+.++++...+..|...|.++.|+| .+..|++|+.|++|.+.|.+... .-..++...   
T Consensus       254 ~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g---  330 (463)
T KOG0270|consen  254 NFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDG---  330 (463)
T ss_pred             ccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEecc---
Confidence               5699999999999999999999987778999999999999 88899999999999999999522 222222222   


Q ss_pred             eEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEE
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVG  250 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~  250 (444)
                                      .|-.++|.|.. ..+++++.||+|+-+|+|  ...++++++..|..+|.++++++. ..+|+++
T Consensus       331 ----------------~VEkv~w~~~se~~f~~~tddG~v~~~D~R--~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~  392 (463)
T KOG0270|consen  331 ----------------EVEKVAWDPHSENSFFVSTDDGTVYYFDIR--NPGKPVWTLKAHDDEISGLSVNIQTPGLLSTA  392 (463)
T ss_pred             ----------------ceEEEEecCCCceeEEEecCCceEEeeecC--CCCCceeEEEeccCCcceEEecCCCCcceeec
Confidence                            49999999987 778888999999999999  455999999999999999999885 5678889


Q ss_pred             cCCCcEEEEEcCCCCcceeEeccc---cCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCceEEE
Q psy8152         251 STTGDMMAVDLRGKGKPCYKYKGF---AGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       251 ~~dg~i~iwd~~~~~~~~~~~~~h---~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      +.++.+++|++.. ..+.... .|   -+...|+++.|+-. +|+.|+..+.++|||+.+...+.+
T Consensus       393 s~d~~Vklw~~~~-~~~~~v~-~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~k  456 (463)
T KOG0270|consen  393 STDKVVKLWKFDV-DSPKSVK-EHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVRK  456 (463)
T ss_pred             cccceEEEEeecC-CCCcccc-cccccccceeecccCCCcceEEEecCccceEEEeecccChhHHH
Confidence            9999999999876 4332211 12   23456777888764 677888888899999988766543

>KOG2048|consensus

Probab=99.95  E-value=2e-25  Score=201.45  Aligned_cols=262  Identities=16%  Similarity=0.217  Sum_probs=211.7

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      ...|++|+|+ ...+.||.+-.+|.|-||++..+-+...+ ++++ ...|-++.+. +..|++.+.+|.|.-||+.+.++
T Consensus        25 Ps~I~slA~s-~kS~~lAvsRt~g~IEiwN~~~~w~~~~v-i~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~  102 (691)
T KOG2048|consen   25 PSEIVSLAYS-HKSNQLAVSRTDGNIEIWNLSNNWFLEPV-IHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQ  102 (691)
T ss_pred             ccceEEEEEe-ccCCceeeeccCCcEEEEccCCCceeeEE-EecCCCCceeeEEEccCCeEEeecCCceEEEEecccCce
Confidence            6899999999 68889999999999999999865444332 2344 5566667664 78899999999999999999999


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      ...+....+.|++++.+|.+..++.|+.||.+..+++..++..+.......                ...|.+++|+|++
T Consensus       103 ~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq----------------~sRvLslsw~~~~  166 (691)
T KOG2048|consen  103 KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQ----------------KSRVLSLSWNPTG  166 (691)
T ss_pred             eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccc----------------cceEEEEEecCCc
Confidence            887777899999999999999999999999888888887766554332222                3379999999999


Q ss_pred             CEEEEEeCCceEEEEEcCCCCCccceE--EE-----eC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         200 DKVAVCSKQGYVRVYDPKITTQRRPVL--KV-----DI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~-----~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      ..|+.|+.||.|++||..   .+..++  +.     .. ...-|.++.|-.++ .|++|...|+|.+||... +.++..+
T Consensus       167 ~~i~~Gs~Dg~Iriwd~~---~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~-gTLiqS~  241 (691)
T KOG2048|consen  167 TKIAGGSIDGVIRIWDVK---SGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIF-GTLIQSH  241 (691)
T ss_pred             cEEEecccCceEEEEEcC---CCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccC-cchhhhh
Confidence            999999999999999999   444333  11     11 23346777777554 799999999999999999 9999999


Q ss_pred             ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce-----EEEeecCCceeEEEEcC
Q psy8152         272 KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL-----LRKDYMQSRLTSILVRS  326 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~-----~~~~~~~~~i~~~~~~~  326 (444)
                      ..|.+.|.+++..+++.++++++.|+.|.-|...+.+.     ..+..|...+.+++...
T Consensus       242 ~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~  301 (691)
T KOG2048|consen  242 SCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE  301 (691)
T ss_pred             hhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeec
Confidence            99999999999999999999999999999998877633     12223666777777643

>KOG3881|consensus

Probab=99.95  E-value=6.1e-26  Score=192.28  Aligned_cols=311  Identities=34%  Similarity=0.585  Sum_probs=252.0

Q ss_pred             cccEEEecCCCcEEEEEcCCCccc--eeeeeeec-ccCcccceEEEeeeccCC-cEEEE-EEcCCeEEEEeCCCCccccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCI--IKNIQNVK-YITNKASVLALNWGNVEE-SELLI-AYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~--~~~~~~~~-~~~h~~~v~~~~~~~~~~-~~l~~-~~~d~~i~vw~~~~~~~~~~   80 (444)
                      -+.|.+|...|.++-..+..+...  ..++..+. .+.-...|+.++|. .++ ..++. .+.+..+..+.+....+...
T Consensus        16 ~~~~~Vg~~tG~lkgi~~~~~t~~~~~~nls~~~s~~~~~~ris~l~~~-~d~~tevl~~r~~~~~~~~~~~~E~~~~s~   94 (412)
T KOG3881|consen   16 LMPLYVGTHTGQLKGIYLKRNTVISEDENLSALNSGVDELDRISSLLFG-VDGETEVLNARSADDDLPKFVIEEFEISSS   94 (412)
T ss_pred             ccceEEeccccccccceEeeccccccchhhhhhhcccchhhhhhhheee-cCCceeEeeccccCcccccccccCCccccc
Confidence            356888888888877766555421  12222222 22456788999998 443 33444 44777787777776666655


Q ss_pred             e----eeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc---cccccCCCeEEEEEec-cCCEEEEeeCC--Ce
Q psy8152          81 T----DVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNK-HSNIIATGGKE--ND  150 (444)
Q Consensus        81 ~----~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~-~~~~l~~~~~d--~~  150 (444)
                      .    .++....+|..+...+..|++|-.+|.+.+|..+.+....   .......++..+.-++ ...++|+|+..  ..
T Consensus        95 ~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~  174 (412)
T KOG3881|consen   95 LDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINE  174 (412)
T ss_pred             cccccccccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccc
Confidence            4    4455577888887777788889999999999988543111   1333446677777777 66677889998  88


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEE
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKV  228 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  228 (444)
                      +.+||+.+.+++++.+....         +.+++..+.|++++.|.|.  ...||+++.-+.+++||.+  .+++|+..|
T Consensus       175 lkiwdle~~~qiw~aKNvpn---------D~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~--~qRRPV~~f  243 (412)
T KOG3881|consen  175 LKIWDLEQSKQIWSAKNVPN---------DRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTR--HQRRPVAQF  243 (412)
T ss_pred             eeeeecccceeeeeccCCCC---------ccccceeeeeeccceecCCCCCceEEEEecceeEEEecCc--ccCcceeEe
Confidence            99999999988888776665         8899999999999999988  6899999999999999999  789999999


Q ss_pred             eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE-eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         229 DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       229 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      .....+|+++...|.+++|++|..-|.+..||++. ++.+.. +.+..+.|+++..+|.+++|+++|.|+.|||+|+.+.
T Consensus       244 d~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~-~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr  322 (412)
T KOG3881|consen  244 DFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRG-GKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR  322 (412)
T ss_pred             ccccCcceeeeecCCCcEEEEecccchhheecccC-ceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence            99999999999999999999999999999999999 877766 8889999999999999999999999999999999999


Q ss_pred             ceEEEeecCCceeEEEEcCCCc
Q psy8152         308 KLLRKDYMQSRLTSILVRSDFS  329 (444)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~~~~  329 (444)
                      +++...|.+..++++.+++.++
T Consensus       323 kll~kvYvKs~lt~il~~~~~n  344 (412)
T KOG3881|consen  323 KLLHKVYVKSRLTFILLRDDVN  344 (412)
T ss_pred             hhhhhhhhhccccEEEecCCcc
Confidence            9999999999999999988765

>KOG4378|consensus

Probab=99.95  E-value=1.1e-25  Score=196.03  Aligned_cols=291  Identities=13%  Similarity=0.149  Sum_probs=218.9

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE--cCCeEEEEeCCCC--ccccceeec
Q psy8152           9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY--SGQKIKIYDTDFK--NFNTNTDVS   84 (444)
Q Consensus         9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~--~d~~i~vw~~~~~--~~~~~~~~~   84 (444)
                      |.+++....+++||+.......    .+......-.+.+++|++  .++|++++  .|..|++|.-...  +....-...
T Consensus         5 l~~aS~gd~~kl~D~s~~~~~~----~~~~~t~~pg~~s~~w~~--~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~   78 (673)
T KOG4378|consen    5 LHVASTGDKTKLSDFSDLETKS----EYVHQTAEPGDFSFNWQR--RNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLT   78 (673)
T ss_pred             eeeeccCCceEEeecccccCcc----ccccCCCCCcceeeeccc--cceEEEeecCCceeEEEecccCCCCccceeeccc
Confidence            3444444579999987665311    111111123399999994  44465554  5788999975422  222222222


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      +....+.++.....++++|+..+.|+|||++...+.+.+..|...|+++.++-...+||+++..|.|.|..+.++.....
T Consensus        79 gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~  158 (673)
T KOG4378|consen   79 GDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT  158 (673)
T ss_pred             cchHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc
Confidence            22333333344568999999999999999998777777888999999999999889999999999999999999887766


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEE-EeCCCCCeeEEEEcc
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLK-VDIPDVALSCITTTN  242 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~  242 (444)
                      +....+                 ..|+-+.|+|..+ +|.+++.+|.|.+||+.   ...+++. ...|..+...|+|+|
T Consensus       159 f~~~sg-----------------qsvRll~ys~skr~lL~~asd~G~VtlwDv~---g~sp~~~~~~~HsAP~~gicfsp  218 (673)
T KOG4378|consen  159 FTIDSG-----------------QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ---GMSPIFHASEAHSAPCRGICFSP  218 (673)
T ss_pred             eecCCC-----------------CeEEEeecccccceeeEeeccCCeEEEEecc---CCCcccchhhhccCCcCcceecC
Confidence            655433                 1467889999874 56688999999999999   5555554 457999999999999


Q ss_pred             C-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC-ceEEEee-cCCce
Q psy8152         243 Q-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK-KLLRKDY-MQSRL  319 (444)
Q Consensus       243 ~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~-~~~~~~~-~~~~i  319 (444)
                      . ..+|++.+.|..|++||++. .+....+. ...+.+.++|.++|.+|+.|+..|.|..||++.. .++..+. |...|
T Consensus       219 sne~l~vsVG~Dkki~~yD~~s-~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sV  296 (673)
T KOG4378|consen  219 SNEALLVSVGYDKKINIYDIRS-QASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASV  296 (673)
T ss_pred             CccceEEEecccceEEEeeccc-ccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccce
Confidence            6 56778899999999999998 77776665 4568899999999999999999999999999874 4555554 88889


Q ss_pred             eEEEEcCC
Q psy8152         320 TSILVRSD  327 (444)
Q Consensus       320 ~~~~~~~~  327 (444)
                      ++++|.+.
T Consensus       297 t~vafq~s  304 (673)
T KOG4378|consen  297 TRVAFQPS  304 (673)
T ss_pred             eEEEeeec
Confidence            99999765

>KOG0267|consensus

Probab=99.95  E-value=1.1e-27  Score=217.38  Aligned_cols=233  Identities=16%  Similarity=0.177  Sum_probs=211.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .|...|.|+..- .....+++|+.|..+.+|.+.....+..+  .+|..+|-++  .+...+|++|+.+|+|++||+...
T Consensus        26 ~hsaav~~lk~~-~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~--~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeA  102 (825)
T KOG0267|consen   26 AHSAAVGCLKIR-KSSRSLVTGGEDEKVNLWAIGKPNAITSL--TGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEA  102 (825)
T ss_pred             hhhhhhceeeee-ccceeeccCCCceeeccccccCCchhhee--eccCCcceeeecCcchhhhcccccCCceeeeehhhh
Confidence            688999999885 67899999999999999998666666555  4778888776  566788999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +.++.+.+|...+.++.|+|-+.++++|+.|+.+++||++...+.+.+++|..                  .|..+.|+|
T Consensus       103 k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~------------------vv~~l~lsP  164 (825)
T KOG0267|consen  103 KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR------------------VVDVLRLSP  164 (825)
T ss_pred             hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcc------------------eeEEEeecC
Confidence            99999999999999999999999999999999999999998889999888766                  689999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                      +|+++++++.|.+++|||+.   .++.+..|..|...+..+.|+|..-+++.|+.|+++++||+++ ...+.........
T Consensus       165 ~Gr~v~~g~ed~tvki~d~~---agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet-fe~I~s~~~~~~~  240 (825)
T KOG0267|consen  165 DGRWVASGGEDNTVKIWDLT---AGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET-FEVISSGKPETDG  240 (825)
T ss_pred             CCceeeccCCcceeeeeccc---ccccccccccccccccccccCchhhhhccCCCCceeeeeccce-eEEeeccCCccCC
Confidence            99999999999999999999   8899999999999999999999998999999999999999999 8888888877889


Q ss_pred             eeEEEecCCCCEEEEEECCC
Q psy8152         278 VKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg  297 (444)
                      |.+++|+|++..+++|....
T Consensus       241 v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  241 VRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             ceeeeecCCceeeecCchhh
Confidence            99999999999988876543

>KOG0267|consensus

Probab=99.95  E-value=1.2e-27  Score=217.09  Aligned_cols=241  Identities=16%  Similarity=0.251  Sum_probs=210.9

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEE
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMK  134 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~  134 (444)
                      ++......-.+++|+.+..      .  .|...+.++  -..++.+++|+.+..+-+|.+.....+..+.+|..+|.++.
T Consensus         6 ~~m~~~~~t~Lr~~~~~~~------~--~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~   77 (825)
T KOG0267|consen    6 FLMKTKRATKLRVWDTREF------V--AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLT   77 (825)
T ss_pred             ccceeeeeeccccccchhh------h--hhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeee
Confidence            3444445556777876421      1  334444333  34678899999999999999988777766789999999999


Q ss_pred             EeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEE
Q psy8152         135 HNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVY  214 (444)
Q Consensus       135 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~  214 (444)
                      |++...+|++|+.+|+|++||+...+.++++.+|..                  .+.++.|+|-+.+++.|+.|..+++|
T Consensus        78 f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~------------------~~~sv~f~P~~~~~a~gStdtd~~iw  139 (825)
T KOG0267|consen   78 FDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLL------------------NITSVDFHPYGEFFASGSTDTDLKIW  139 (825)
T ss_pred             cCcchhhhcccccCCceeeeehhhhhhhhhhhcccc------------------CcceeeeccceEEeccccccccceeh
Confidence            999999999999999999999999999999998887                  79999999999999999999999999


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      |++   ...+.+.+.+|...+..+.|+|+|++++.|+.|..++|||+.. ++.+..|..|.+.+..+.|+|..-++++|+
T Consensus       140 D~R---k~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a-gk~~~ef~~~e~~v~sle~hp~e~Lla~Gs  215 (825)
T KOG0267|consen  140 DIR---KKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA-GKLSKEFKSHEGKVQSLEFHPLEVLLAPGS  215 (825)
T ss_pred             hhh---ccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccc-cccccccccccccccccccCchhhhhccCC
Confidence            999   8889999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             CCCcEEEEEcCCCceEEEee-cCCceeEEEEcCC
Q psy8152         295 LDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSD  327 (444)
Q Consensus       295 ~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~  327 (444)
                      .|++|++||+.+-+.+.... ....|.+.+|+++
T Consensus       216 ~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~  249 (825)
T KOG0267|consen  216 SDRTVRFWDLETFEVISSGKPETDGVRSLAFNPD  249 (825)
T ss_pred             CCceeeeeccceeEEeeccCCccCCceeeeecCC
Confidence            99999999999888877765 5677899999876

>KOG4328|consensus

Probab=99.94  E-value=2.2e-25  Score=192.40  Aligned_cols=278  Identities=13%  Similarity=0.137  Sum_probs=207.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ...+++|..-|.|-+|++.+.+.....+....  .|..+|.+|.|+|.+...+++.|.||+|++-|++++.....+....
T Consensus       200 ~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~--~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~  277 (498)
T KOG4328|consen  200 RKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFT--PHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDT  277 (498)
T ss_pred             ceEEEEccCCCcEEEEecCCCCCccCceEEec--cCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCc
Confidence            37899999999999999964332111122222  8999999999998888999999999999999999877666655432


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCce-
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTK-  160 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~-  160 (444)
                      ....+..+  +.....++.+..=|...+||++++.. ...+.-|...|..++++| ...+|||++.|++++|||++... 
T Consensus       278 d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~  357 (498)
T KOG4328|consen  278 DNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRG  357 (498)
T ss_pred             cceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcC
Confidence            23333333  44566677777778999999998765 445566888999999999 78899999999999999998732 


Q ss_pred             -e--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-CCCccceEEEeCCCC---
Q psy8152         161 -N--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI-TTQRRPVLKVDIPDV---  233 (444)
Q Consensus       161 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~---  233 (444)
                       .  +.....|..                  .|.++.|+|.+-.|++.+.|..|+|||... +....+..++. |..   
T Consensus       358 K~sp~lst~~Hrr------------------sV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~  418 (498)
T KOG4328|consen  358 KASPFLSTLPHRR------------------SVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTG  418 (498)
T ss_pred             CCCcceecccccc------------------eeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCccc
Confidence             2  222233333                  799999999997799999999999999830 11333333333 221   


Q ss_pred             ---CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC-ceeEE-EecCCCC-EEEEEECCCcEEEEEcC
Q psy8152         234 ---ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG-CVKDI-ACPLNEN-LILSVSLDRHFRVHDFH  305 (444)
Q Consensus       234 ---~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~-~i~~~-~~s~~~~-~l~s~~~dg~i~vw~~~  305 (444)
                         ......|.|+.++|++|-.-..|-|+|-.. ++.+..+..... .|.++ .|+|-+. +++.++..|.|+||--.
T Consensus       419 RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~-~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  419 RWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNG-GQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             ccccchhheeCCCccEEEEeccCcceeEEcCCC-CEEeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence               234568999999999999999999999888 887888765433 66665 8999887 44455567889988643

>KOG2106|consensus

Probab=99.94  E-value=3.1e-24  Score=187.45  Aligned_cols=316  Identities=13%  Similarity=0.152  Sum_probs=230.4

Q ss_pred             cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce---eecccccc
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT---DVSFGEGD   89 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~---~~~~~~~~   89 (444)
                      +.+..+.+|+.+.+...    -.++  .-+..|....|+|.+.+++++++. +.+..|+..++.+.+..   ..+. ...
T Consensus       177 s~~h~lSVWdWqk~~~~----~~vk--~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~fek~e-kk~  248 (626)
T KOG2106|consen  177 SNPHMLSVWDWQKKAKL----GPVK--TSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIFEKRE-KKF  248 (626)
T ss_pred             CCccccchhhchhhhcc----Ccce--eccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeecccccc-ceE
Confidence            45678889998877641    2222  346788999999767777777776 89999999887765543   2222 366


Q ss_pred             EEEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee--e
Q psy8152          90 IVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA--K  166 (444)
Q Consensus        90 v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~--~  166 (444)
                      |.++.+- +.-+++|..+|.|.||+..+.+..+....|.+.|.+++...+|.+|- |+.|..|..||-.- +.+...  +
T Consensus       249 Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y-~k~r~~elP  326 (626)
T KOG2106|consen  249 VLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNY-RKLRETELP  326 (626)
T ss_pred             EEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEeccccc-cccccccCc
Confidence            7777553 34578899999999999988877776679999999999998886555 99999999999322 111111  1


Q ss_pred             cccceeeEeee-CCC-----------------cc---cccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce
Q psy8152         167 NVSHRVLVYSV-KPD-----------------EF---DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV  225 (444)
Q Consensus       167 ~~~~~~~~~~~-~~~-----------------~~---~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  225 (444)
                      ...+.++.+.- .++                 ++   ...+......++.+|+..++++++.|+.+++|+ .    .+++
T Consensus       327 e~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~-~----~k~~  401 (626)
T KOG2106|consen  327 EQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN-D----HKLE  401 (626)
T ss_pred             hhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc-C----Ccee
Confidence            11111111111 000                 00   112233578899999999999999999999999 4    4555


Q ss_pred             EEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         226 LKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       226 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      .+.. ...+..|+.|+|.| .||.|+..|...+.|..+ ...+..-.. ..+++.++|+|+|.+||.|+.|+.|+||.+.
T Consensus       402 wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~-~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs  477 (626)
T KOG2106|consen  402 WTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTET-QDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVS  477 (626)
T ss_pred             EEEE-ecCceeEeeccCcc-eEEEeeccceEEEEeccc-ceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEEC
Confidence            5433 34568899999999 999999999999999998 555554444 8899999999999999999999999999997


Q ss_pred             CC-ceEEEee--cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         306 SK-KLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       306 ~~-~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      .. ....+..  +..+|+.+.|+.+         ..++.+-+.|-.|-.|....
T Consensus       478 ~~g~~y~r~~k~~gs~ithLDwS~D---------s~~~~~~S~d~eiLyW~~~~  522 (626)
T KOG2106|consen  478 ANGRKYSRVGKCSGSPITHLDWSSD---------SQFLVSNSGDYEILYWKPSE  522 (626)
T ss_pred             CCCcEEEEeeeecCceeEEeeecCC---------CceEEeccCceEEEEEcccc
Confidence            64 3333332  4567888877644         67999999999999995443

>KOG1273|consensus

Probab=99.94  E-value=5.7e-26  Score=187.07  Aligned_cols=250  Identities=14%  Similarity=0.175  Sum_probs=191.6

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~  167 (444)
                      ...+.|++.|.+||+|+.+|.|.|||+.+....+.+.+|..+|.+++|+++|+.|++++.|..|.+||+..|.+++.+..
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            55667889999999999999999999999998888889999999999999999999999999999999999999888765


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCC------CCCeeEEEE
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------DVALSCITT  240 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~  240 (444)
                      ..                   +|+.+.|+|.. +..+++-.+..-.+.++.   .  +++++...      +..-.+..|
T Consensus       106 ~s-------------------pv~~~q~hp~k~n~~va~~~~~sp~vi~~s---~--~~h~~Lp~d~d~dln~sas~~~f  161 (405)
T KOG1273|consen  106 DS-------------------PVWGAQWHPRKRNKCVATIMEESPVVIDFS---D--PKHSVLPKDDDGDLNSSASHGVF  161 (405)
T ss_pred             cC-------------------ccceeeeccccCCeEEEEEecCCcEEEEec---C--CceeeccCCCccccccccccccc
Confidence            44                   49999999976 444444444455566655   2  22222211      112234468


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-CceeEEEecCCCCEEEEEECCCcEEEEEcCC-------CceEEE
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-GCVKDIACPLNENLILSVSLDRHFRVHDFHS-------KKLLRK  312 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~-------~~~~~~  312 (444)
                      .+.|++|++|...|.+.+++..+ .+++..++-.. ..|.++.|+..|++|+..+.|+.||.|++..       +++...
T Consensus       162 dr~g~yIitGtsKGkllv~~a~t-~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~  240 (405)
T KOG1273|consen  162 DRRGKYIITGTSKGKLLVYDAET-LECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPE  240 (405)
T ss_pred             cCCCCEEEEecCcceEEEEecch-heeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChh
Confidence            89999999999999999999999 89998888555 7899999999999999999999999999863       122211


Q ss_pred             eecCCceeEEEEcC-CCcccccchhhhhcccc-ccCCCccccCCCcccccccccccc
Q psy8152         313 DYMQSRLTSILVRS-DFSLENETKKEEQEHSE-EKGDSDEKYDPEHFEMNQVTRENY  367 (444)
Q Consensus       313 ~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~s~-~~d~~i~~W~~~~~~~~~~~~~~~  367 (444)
                      .....-|+.+.|.. .|+     .++.++..+ .....+.||....+.+..++++..
T Consensus       241 ~K~qDvVNk~~Wk~ccfs-----~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k  292 (405)
T KOG1273|consen  241 HKLQDVVNKLQWKKCCFS-----GDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK  292 (405)
T ss_pred             HHHHHHHhhhhhhheeec-----CCccEEEeccccceeEEEEecCCcceeeeecCCc
Confidence            22233355555432 233     345665544 456789999999988888876554

>KOG0321|consensus

Probab=99.94  E-value=1.4e-25  Score=200.99  Aligned_cols=300  Identities=14%  Similarity=0.114  Sum_probs=207.2

Q ss_pred             EEeeec--cCCcEEEEEEcCCeEEEEeCCCCccc----cceeeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          47 ALNWGN--VEESELLIAYSGQKIKIYDTDFKNFN----TNTDVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        47 ~~~~~~--~~~~~l~~~~~d~~i~vw~~~~~~~~----~~~~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +..|++  .....|+.+..+|.|.++|.......    .......|...|..+.  |...+|++++.|.++++||+++.+
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~  133 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR  133 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence            356663  23467888999999999998654332    1123357888998885  545679999999999999999998


Q ss_pred             cccc--ccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCcee--e-----eeeecccceeeEeeeCCC--------
Q psy8152         119 DQWT--NFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN--I-----FSAKNVSHRVLVYSVKPD--------  180 (444)
Q Consensus       119 ~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~--~-----~~~~~~~~~~~~~~~~~~--------  180 (444)
                      +...  +++|...|.++||.| +...|++|+.||.|.|||++-...  +     .....|...  .--..|.        
T Consensus       134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~--ptpskp~~kr~~k~k  211 (720)
T KOG0321|consen  134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTA--PTPSKPLKKRIRKWK  211 (720)
T ss_pred             eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCC--CCCCchhhccccccc
Confidence            8875  889999999999999 888999999999999999986330  0     000011110  0000000        


Q ss_pred             cccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCC-----CCccceEEEeCC---CCCeeEEEEccCCCEEEEEc
Q psy8152         181 EFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKIT-----TQRRPVLKVDIP---DVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~-----~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~  251 (444)
                      .....+...|+.+.| .|...||+++. |+.|++||+++.     ........+..|   ...++++.....|.+|++.+
T Consensus       212 A~s~ti~ssvTvv~f-kDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsC  290 (720)
T KOG0321|consen  212 AASNTIFSSVTVVLF-KDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASC  290 (720)
T ss_pred             cccCceeeeeEEEEE-eccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEe
Confidence            001111122444444 67788888887 999999999921     011122223333   33567777777789999999


Q ss_pred             CCCcEEEEEcCCC-CcceeEeccccCcee--EEEecCCCCEEEEEECCCcEEEEEcCCCceEEE--eecCCceeEEEEcC
Q psy8152         252 TTGDMMAVDLRGK-GKPCYKYKGFAGCVK--DIACPLNENLILSVSLDRHFRVHDFHSKKLLRK--DYMQSRLTSILVRS  326 (444)
Q Consensus       252 ~dg~i~iwd~~~~-~~~~~~~~~h~~~i~--~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~--~~~~~~i~~~~~~~  326 (444)
                      .|+.|++|++... ..++..+.++...-.  .-..+|++.+|++|+.|...++|.+.+.+.-..  +.|...|+++.|.+
T Consensus       291 tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p  370 (720)
T KOG0321|consen  291 TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLP  370 (720)
T ss_pred             cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecc
Confidence            9999999999872 234455554432111  124679999999999999999999988554333  34888899999987


Q ss_pred             CCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         327 DFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       327 ~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                      .--        .-++++++|..+++|++..+
T Consensus       371 S~~--------t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  371 SAT--------TPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             ccC--------CCceeeccCcceEEEeccCc
Confidence            622        35777899999999999753

>KOG1063|consensus

Probab=99.94  E-value=5.8e-25  Score=198.87  Aligned_cols=342  Identities=12%  Similarity=0.138  Sum_probs=251.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeC-CCCccccceee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDT-DFKNFNTNTDV   83 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~-~~~~~~~~~~~   83 (444)
                      .-.|++++.|.++.+|.......+-...-.+... +....-....|+ |+++.+++-+.-|..++|.. +..........
T Consensus       279 ~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~-~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~i  357 (764)
T KOG1063|consen  279 GLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWS-PNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVI  357 (764)
T ss_pred             hhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEc-CCCCEEEEecccCcEEEEeccCccceeecccc
Confidence            3478999999999999987764332222333333 344568899999 79999999999999999983 23344444455


Q ss_pred             ccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      .+|...|..+.  |.|.+|++++.|.+-|++-.-..+..+    ....|...++|++|-+....+++|.....+|+|+..
T Consensus       358 SGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aP  437 (764)
T KOG1063|consen  358 SGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAP  437 (764)
T ss_pred             ccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCc
Confidence            68888898774  669999999999999998755222222    344588999999999867789999999999999874


Q ss_pred             Cc----------eeeeee--ecccceeeEe--------------------------eeCCCcc-----------------
Q psy8152         158 TT----------KNIFSA--KNVSHRVLVY--------------------------SVKPDEF-----------------  182 (444)
Q Consensus       158 ~~----------~~~~~~--~~~~~~~~~~--------------------------~~~~~~~-----------------  182 (444)
                      ..          .+....  ......+..+                          ...|-.+                 
T Consensus       438 k~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPE  517 (764)
T KOG1063|consen  438 KSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPE  517 (764)
T ss_pred             HHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchh
Confidence            31          000000  0000000000                          0011000                 


Q ss_pred             ---cccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152         183 ---DLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       183 ---~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                         -..|...|++++.+|+++++|+++..     ..|++|+..   +...+..+.+|.-.|+.++|||++++|++.+.|+
T Consensus       518 v~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~---~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDR  594 (764)
T KOG1063|consen  518 VHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTA---NWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDR  594 (764)
T ss_pred             hHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEecc---chhhhheecccceEEEEEEECCCCcEEEEeecCc
Confidence               12234459999999999999998764     369999998   8888889999999999999999999999999999


Q ss_pred             cEEEEEcCCCCc---ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC--ceEEE---eecCCceeEEEEcC
Q psy8152         255 DMMAVDLRGKGK---PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK--KLLRK---DYMQSRLTSILVRS  326 (444)
Q Consensus       255 ~i~iwd~~~~~~---~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~--~~~~~---~~~~~~i~~~~~~~  326 (444)
                      ++.+|.......   .....+.|+.-|.++.|+|++.+++|+|.|.+|+||.....  +.+..   +.+...|+++++.+
T Consensus       595 t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~  674 (764)
T KOG1063|consen  595 TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLP  674 (764)
T ss_pred             eEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeec
Confidence            999998765111   12335689999999999999999999999999999999887  44444   45788999999987


Q ss_pred             CCcccccchhhhhccccccCCCccccCCC
Q psy8152         327 DFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       327 ~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      -...+    +...++.|-+.|.|.||...
T Consensus       675 ~~~~e----~~~~vavGle~GeI~l~~~~  699 (764)
T KOG1063|consen  675 VDHNE----KGDVVAVGLEKGEIVLWRRK  699 (764)
T ss_pred             ccccc----ccceEEEEecccEEEEEecc
Confidence            65521    22356667788999999866

>KOG2096|consensus

Probab=99.94  E-value=1.4e-24  Score=179.21  Aligned_cols=276  Identities=15%  Similarity=0.141  Sum_probs=201.2

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCC---Cccc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDF---KNFN   78 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~---~~~~   78 (444)
                      ++++..|++.+.|+.|++|++..-...  .-..+..--.-+-.+.++|+ |+-.-++ +.-...++++|.+..   |...
T Consensus        95 sSdGK~lat~~~Dr~Ir~w~~~DF~~~--eHr~~R~nve~dhpT~V~Fa-pDc~s~vv~~~~g~~l~vyk~~K~~dG~~~  171 (420)
T KOG2096|consen   95 SSDGKKLATISGDRSIRLWDVRDFENK--EHRCIRQNVEYDHPTRVVFA-PDCKSVVVSVKRGNKLCVYKLVKKTDGSGS  171 (420)
T ss_pred             cCCCceeEEEeCCceEEEEecchhhhh--hhhHhhccccCCCceEEEEC-CCcceEEEEEccCCEEEEEEeeecccCCCC
Confidence            467899999999999999998764421  11111111112345889999 5665555 455557899998753   2222


Q ss_pred             ccee-------eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC
Q psy8152          79 TNTD-------VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN  149 (444)
Q Consensus        79 ~~~~-------~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  149 (444)
                      ..+.       -..|...+..+  +-.+.+|++++.|..|.+|+++ |+.+..+......-+..+.+|+|+++++++.--
T Consensus       172 ~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTp  250 (420)
T KOG2096|consen  172 HHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTP  250 (420)
T ss_pred             cccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCC
Confidence            2111       01345555554  4567899999999999999999 777765666666777889999999999999999


Q ss_pred             eEEEEEcCCc--------eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC---
Q psy8152         150 DLKLWDLNTT--------KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI---  218 (444)
Q Consensus       150 ~i~vwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---  218 (444)
                      -|++|.+--+        ..++.+++|..                  .|..++|+|+...+++.+.||+++|||+.-   
T Consensus       251 DVkVwE~~f~kdG~fqev~rvf~LkGH~s------------------aV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~  312 (420)
T KOG2096|consen  251 DVKVWEPIFTKDGTFQEVKRVFSLKGHQS------------------AVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE  312 (420)
T ss_pred             CceEEEEEeccCcchhhhhhhheeccchh------------------heeeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence            9999987432        25677788887                  899999999999999999999999999861   


Q ss_pred             -CCCccceEEEe----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEE
Q psy8152         219 -TTQRRPVLKVD----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       219 -~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s  292 (444)
                       ....+.+....    ........++++|.|+.|+++. ...|++|..+. ++....+. .|...|++++|+++|+++++
T Consensus       313 ~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~-g~~~~~~e~~h~~~Is~is~~~~g~~~at  390 (420)
T KOG2096|consen  313 AGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASED-GKDYPELEDIHSTTISSISYSSDGKYIAT  390 (420)
T ss_pred             cCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEccc-CccchhHHHhhcCceeeEEecCCCcEEee
Confidence             11222222221    1122334899999999887653 45799999999 88877776 69999999999999999999


Q ss_pred             EECCCcEEEEE
Q psy8152         293 VSLDRHFRVHD  303 (444)
Q Consensus       293 ~~~dg~i~vw~  303 (444)
                      ++ |+.++++.
T Consensus       391 cG-dr~vrv~~  400 (420)
T KOG2096|consen  391 CG-DRYVRVIR  400 (420)
T ss_pred             ec-ceeeeeec
Confidence            76 66777775

>KOG2919|consensus

Probab=99.94  E-value=6.3e-25  Score=181.59  Aligned_cols=274  Identities=13%  Similarity=0.152  Sum_probs=215.8

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccc-----eeeee--eecccCcccceEEEeeec------cCCcEEEEEEcCCeEEE
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCI-----IKNIQ--NVKYITNKASVLALNWGN------VEESELLIAYSGQKIKI   69 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~-----~~~~~--~~~~~~h~~~v~~~~~~~------~~~~~l~~~~~d~~i~v   69 (444)
                      ++++.-|++-+.+..+++|++...-..     ..++.  ..-.......|...+|-+      |+..++++.+.+.-|++
T Consensus        58 SPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~  137 (406)
T KOG2919|consen   58 SPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHL  137 (406)
T ss_pred             CCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCceee
Confidence            356788999999999999998432210     01111  111113456788888763      67889999999999999


Q ss_pred             EeCCCCccccceeecccccc-----EEEEEeCCCeEEEEecCCcEEEEEc-CCCCcc--cccc-----ccCCCeEEEEEe
Q psy8152          70 YDTDFKNFNTNTDVSFGEGD-----IVGVSRYDECILTAVKSGDVKLWRY-KTEPDQ--WTNF-----NVGPQLECMKHN  136 (444)
Q Consensus        70 w~~~~~~~~~~~~~~~~~~~-----v~~~s~~~~~l~~~~~dg~i~iw~~-~~~~~~--~~~~-----~~~~~v~~~~~~  136 (444)
                      ||..+|+....+....|...     .++|+|+|.+|++| ....|+++|+ +.|+..  ....     +..+-|.|++|+
T Consensus       138 wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~s  216 (406)
T KOG2919|consen  138 WDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFS  216 (406)
T ss_pred             eeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeecc
Confidence            99999999999877666443     35678999999865 6679999998 444321  1222     236778999999


Q ss_pred             c-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEE
Q psy8152         137 K-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVY  214 (444)
Q Consensus       137 ~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~  214 (444)
                      | +...++.|+....+-||.-..+.+++.+.+|.+                  .|+.++|.++|+.|++|.. +-.|..|
T Consensus       217 P~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~g------------------GvThL~~~edGn~lfsGaRk~dkIl~W  278 (406)
T KOG2919|consen  217 PMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGG------------------GVTHLQWCEDGNKLFSGARKDDKILCW  278 (406)
T ss_pred             CCCCcceeeecccceeeeEecCCCCceeeecccCC------------------CeeeEEeccCcCeecccccCCCeEEEE
Confidence            9 778999999999999999888999999988888                  8999999999999998876 7799999


Q ss_pred             EcCCCCCccceEEEeCCCC-CeeEEEE--ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDV-ALSCITT--TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~-~i~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      |+|  ....++..+..|.. .-..|-|  .|.+++|++|+.+|.|++||++.++..+..+..|...++.++++|--++++
T Consensus       279 DiR--~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpila  356 (406)
T KOG2919|consen  279 DIR--YSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILA  356 (406)
T ss_pred             eeh--hccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceee
Confidence            999  66778888877755 3344555  578999999999999999999997888888989999999999999988888


Q ss_pred             EEECCC
Q psy8152         292 SVSLDR  297 (444)
Q Consensus       292 s~~~dg  297 (444)
                      +++...
T Consensus       357 tssGqr  362 (406)
T KOG2919|consen  357 TSSGQR  362 (406)
T ss_pred             eccCce
Confidence            876543

>KOG0650|consensus

Probab=99.94  E-value=2.4e-25  Score=198.09  Aligned_cols=280  Identities=14%  Similarity=0.105  Sum_probs=212.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCC--eEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDE--CILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~--~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|.+.|+||... |.+.+|++|+.||+|+||.+.++.++..+...+ .....+++|.+.  .||++-.. .+.|.+..-|
T Consensus       398 GHtg~Vr~iSvd-p~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~-~I~~vaw~P~~~~~vLAvA~~~-~~~ivnp~~G  474 (733)
T KOG0650|consen  398 GHTGLVRSISVD-PSGEWLASGSDDGTVRIWEIATGRCVRTVQFDS-EIRSVAWNPLSDLCVLAVAVGE-CVLIVNPIFG  474 (733)
T ss_pred             ccCCeEEEEEec-CCcceeeecCCCCcEEEEEeecceEEEEEeecc-eeEEEEecCCCCceeEEEEecC-ceEEeCcccc
Confidence            999999999999 799999999999999999999999999886532 223333444443  23333222 2433332111


Q ss_pred             ---------------------------------C----ccccccccCCCeEEEEEeccCCEEEEeeCC---CeEEEEEcC
Q psy8152         118 ---------------------------------P----DQWTNFNVGPQLECMKHNKHSNIIATGGKE---NDLKLWDLN  157 (444)
Q Consensus       118 ---------------------------------~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vwd~~  157 (444)
                                                       +    -+.....|...|..+.|+..|.+|++...+   ..|.|+++.
T Consensus       475 ~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLS  554 (733)
T KOG0650|consen  475 DRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLS  554 (733)
T ss_pred             chhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecc
Confidence                                             0    012355688899999999999999987653   568888887


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      .......++...+                  .|.++.|+|...+|++++. ..|+|||+.   ....+..+......|..
T Consensus       555 K~~sQ~PF~kskG------------------~vq~v~FHPs~p~lfVaTq-~~vRiYdL~---kqelvKkL~tg~kwiS~  612 (733)
T KOG0650|consen  555 KRKSQSPFRKSKG------------------LVQRVKFHPSKPYLFVATQ-RSVRIYDLS---KQELVKKLLTGSKWISS  612 (733)
T ss_pred             cccccCchhhcCC------------------ceeEEEecCCCceEEEEec-cceEEEehh---HHHHHHHHhcCCeeeee
Confidence            7655544433333                  6999999999988888776 589999999   77777777788889999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC------CCceEE
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH------SKKLLR  311 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~------~~~~~~  311 (444)
                      ++.+|.|.-|++|+.|+.+..||+.-..++.+++.-|...+++++|++.-.++++|+.||++.||.-.      ...++.
T Consensus       613 msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliV  692 (733)
T KOG0650|consen  613 MSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIV  692 (733)
T ss_pred             eeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceE
Confidence            99999999999999999999999987567889999999999999999999999999999999998532      222222


Q ss_pred             E---ee-cCCc----eeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         312 K---DY-MQSR----LTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       312 ~---~~-~~~~----i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      -   +. |...    |....|+         |....|.|++.||+|++|.
T Consensus       693 PlK~L~gH~~~~~~gVLd~~wH---------P~qpWLfsAGAd~tirlfT  733 (733)
T KOG0650|consen  693 PLKRLRGHEKTNDLGVLDTIWH---------PRQPWLFSAGADGTIRLFT  733 (733)
T ss_pred             eeeeccCceeecccceEeeccc---------CCCceEEecCCCceEEeeC
Confidence            2   22 3222    3344444         5567899999999999993

>KOG0302|consensus

Probab=99.94  E-value=5.8e-25  Score=185.36  Aligned_cols=245  Identities=14%  Similarity=0.177  Sum_probs=180.7

Q ss_pred             cCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCC--------------ccccceeecccc--ccEEEEEeC-CCeE
Q psy8152          39 ITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFK--------------NFNTNTDVSFGE--GDIVGVSRY-DECI  100 (444)
Q Consensus        39 ~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~--------------~~~~~~~~~~~~--~~v~~~s~~-~~~l  100 (444)
                      .+|.+.|..+.-+|- +..+.++=+..|.|+||++...              +....+...+|.  +..+++||- -..|
T Consensus       148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L  227 (440)
T KOG0302|consen  148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL  227 (440)
T ss_pred             cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence            378888888887742 3445555666799999997421              111122333444  334455652 2458


Q ss_pred             EEEecCCcEEEEEcCCCCccc---cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCce---eeeeeecccceee
Q psy8152         101 LTAVKSGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTK---NIFSAKNVSHRVL  173 (444)
Q Consensus       101 ~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~  173 (444)
                      ++|..-+.|++|...++....   .+.+|...|-.++|+| ....|++|+.||+|+|||++.+.   ++.+ +.|..   
T Consensus       228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~s---  303 (440)
T KOG0302|consen  228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNS---  303 (440)
T ss_pred             ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCC---
Confidence            888888999999988875432   4667999999999999 67899999999999999999873   3333 55555   


Q ss_pred             EeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEcC
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGST  252 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~  252 (444)
                                     -|+-|.|+..-.+||+|+.||+++|||+|.-...+++..|+.|..+|++|.|+|. ...|++++.
T Consensus       304 ---------------DVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~  368 (440)
T KOG0302|consen  304 ---------------DVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGE  368 (440)
T ss_pred             ---------------ceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccC
Confidence                           6999999988889999999999999999955566889999999999999999996 567888999


Q ss_pred             CCcEEEEEcCCCC-----------c----ceeEeccc--cCceeEEEecCCC-CEEEEEECCCcEEEEE
Q psy8152         253 TGDMMAVDLRGKG-----------K----PCYKYKGF--AGCVKDIACPLNE-NLILSVSLDRHFRVHD  303 (444)
Q Consensus       253 dg~i~iwd~~~~~-----------~----~~~~~~~h--~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~  303 (444)
                      |.+|.|||+....           .    +.+-+-.|  ...|..+.|+++- .+|++.+.|| +.||.
T Consensus       369 D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  369 DNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             CCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence            9999999986410           0    11111124  3467889999876 4788888887 44543

>KOG1445|consensus

Probab=99.94  E-value=5.7e-25  Score=197.07  Aligned_cols=137  Identities=18%  Similarity=0.237  Sum_probs=113.1

Q ss_pred             eeEEEEecCC-CEEEEEeCCceEEEEEcCCC----CCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCC
Q psy8152         190 VNGISFLPNS-DKVAVCSKQGYVRVYDPKIT----TQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       190 i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~  263 (444)
                      |+.+.|.|-. ..||+++.||.|++|.+...    ....+...+..|...|+++.|+|- ...|++++.|.+|++||+++
T Consensus       630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~  709 (1012)
T KOG1445|consen  630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLAN  709 (1012)
T ss_pred             eeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhh
Confidence            8999999966 88999999999999999732    223455667889999999999995 56889999999999999999


Q ss_pred             CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce-EEEee--cCCceeEEEEcCC
Q psy8152         264 KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL-LRKDY--MQSRLTSILVRSD  327 (444)
Q Consensus       264 ~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~-~~~~~--~~~~i~~~~~~~~  327 (444)
                       .+....|.+|...|..++|||+|+.+|+.+.||+|+||+-++++. ++.-.  ...+-..+.|.++
T Consensus       710 -~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacd  775 (1012)
T KOG1445|consen  710 -AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACD  775 (1012)
T ss_pred             -hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEec
Confidence             999999999999999999999999999999999999999887643 22211  2333445556544

>KOG0270|consensus

Probab=99.93  E-value=5.2e-25  Score=189.47  Aligned_cols=243  Identities=13%  Similarity=0.193  Sum_probs=188.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceee---------------eeeecccCcccceEEEeeeccCCcEEEEEEcCCeEE
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKN---------------IQNVKYITNKASVLALNWGNVEESELLIAYSGQKIK   68 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~---------------~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~   68 (444)
                      ..++++|+|+.+..|.|||+.-.......               .+.....+|+.+|.+|+|+..-.+.||+||.|.+|+
T Consensus       190 ~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~  269 (463)
T KOG0270|consen  190 GAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVK  269 (463)
T ss_pred             CCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEE
Confidence            35689999999999999998532211000               011112279999999999966678899999999999


Q ss_pred             EEeCCCCccccceeeccccccEEEEE--e-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEE
Q psy8152          69 IYDTDFKNFNTNTDVSFGEGDIVGVS--R-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIAT  144 (444)
Q Consensus        69 vw~~~~~~~~~~~~~~~~~~~v~~~s--~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~  144 (444)
                      +||+.++++..++.  .|...|.++.  | .+.+|++|+.|++|.+.|.+............+.|-.++|.| ....+++
T Consensus       270 lWD~~~g~p~~s~~--~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~  347 (463)
T KOG0270|consen  270 LWDVDTGKPKSSIT--HHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFV  347 (463)
T ss_pred             EEEcCCCCcceehh--hcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEE
Confidence            99999999999986  4566676664  3 467899999999999999986555555666788999999999 6778888


Q ss_pred             eeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCc
Q psy8152         145 GGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQR  222 (444)
Q Consensus       145 ~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~  222 (444)
                      ++.||+|+-+|+|. ++++++++.|..                  .|.++++++.- .++++++.++.|++|++. ....
T Consensus       348 ~tddG~v~~~D~R~~~~~vwt~~AHd~------------------~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~-~~~~  408 (463)
T KOG0270|consen  348 STDDGTVYYFDIRNPGKPVWTLKAHDD------------------EISGLSVNIQTPGLLSTASTDKVVKLWKFD-VDSP  408 (463)
T ss_pred             ecCCceEEeeecCCCCCceeEEEeccC------------------CcceEEecCCCCcceeeccccceEEEEeec-CCCC
Confidence            99999999999998 599999999998                  89999998766 788999999999999998 2222


Q ss_pred             cceEEEeCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcce
Q psy8152         223 RPVLKVDIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       223 ~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                      +.+..-...-+...|.++.|+- -+++.|+..+.++|||+.+ ..++
T Consensus       409 ~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~-~~~V  454 (463)
T KOG0270|consen  409 KSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFT-NSPV  454 (463)
T ss_pred             cccccccccccceeecccCCCcceEEEecCccceEEEeeccc-ChhH
Confidence            2222211122335677777764 4567788888999999988 5544

>KOG2048|consensus

Probab=99.93  E-value=2e-23  Score=188.73  Aligned_cols=278  Identities=15%  Similarity=0.192  Sum_probs=219.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ..++||++-.+|.|-+|++..+-.....   +.. +-...|-+++|+  ++..|++.+.+|.|.-||+.+++....+...
T Consensus        36 kS~~lAvsRt~g~IEiwN~~~~w~~~~v---i~g-~~drsIE~L~W~--e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~  109 (691)
T KOG2048|consen   36 KSNQLAVSRTDGNIEIWNLSNNWFLEPV---IHG-PEDRSIESLAWA--EGGRLFSSGLSGSITEWDLHTLKQKYNIDSN  109 (691)
T ss_pred             cCCceeeeccCCcEEEEccCCCceeeEE---Eec-CCCCceeeEEEc--cCCeEEeecCCceEEEEecccCceeEEecCC
Confidence            3467999999999999999886542111   111 456899999999  4889999999999999999999999888766


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      +...+..+++|.+..++.|+.||.+..++...+....  .+....+.|.+++|+|++..|++|+.||.|++||...+..+
T Consensus       110 gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~  189 (691)
T KOG2048|consen  110 GGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTL  189 (691)
T ss_pred             CcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceE
Confidence            5555556667889999999999988888877666543  23345689999999999999999999999999999998876


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      ......-          +++..+.+.-|.++.|..+ ..|++|..-|+|.+||..   ....+..+..|...|.+++..+
T Consensus       190 ~~~~~~~----------d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~---~gTLiqS~~~h~adVl~Lav~~  255 (691)
T KOG2048|consen  190 HIITMQL----------DRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSI---FGTLIQSHSCHDADVLALAVAD  255 (691)
T ss_pred             EEeeecc----------cccccCCceEEEEEEEeec-CcEEEecCCceEEEEccc---CcchhhhhhhhhcceeEEEEcC
Confidence            6221111          1122223446889998865 578999999999999998   8888888999999999999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ++.++++++.|+.|..|...+ .+.    ......|...|.+++..++  .|++|+.|..+.+-...
T Consensus       256 ~~d~vfsaGvd~~ii~~~~~~-~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~  319 (691)
T KOG2048|consen  256 NEDRVFSAGVDPKIIQYSLTT-NKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSR  319 (691)
T ss_pred             CCCeEEEccCCCceEEEEecC-CccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEcccc
Confidence            999999999999999998876 322    2223368888999988766  78888888887765443

>KOG0650|consensus

Probab=99.93  E-value=3.4e-24  Score=190.90  Aligned_cols=271  Identities=15%  Similarity=0.223  Sum_probs=207.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc-----
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN-----   78 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~-----   78 (444)
                      ..+..|++|+.||+|+||.+.++++.    ..+.   -.+.|.||+|+|.....+++++....+.|-+..-|..+     
T Consensus       410 p~G~wlasGsdDGtvriWEi~TgRcv----r~~~---~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t  482 (733)
T KOG0650|consen  410 PSGEWLASGSDDGTVRIWEIATGRCV----RTVQ---FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPT  482 (733)
T ss_pred             CCcceeeecCCCCcEEEEEeecceEE----EEEe---ecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcch
Confidence            35789999999999999999999972    3222   36799999999532333334444444655554322100     


Q ss_pred             ----cce--------------------------eeccccccEEEE--EeCCCeEEEEecC---CcEEEEEcCCCCccccc
Q psy8152          79 ----TNT--------------------------DVSFGEGDIVGV--SRYDECILTAVKS---GDVKLWRYKTEPDQWTN  123 (444)
Q Consensus        79 ----~~~--------------------------~~~~~~~~v~~~--s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~  123 (444)
                          ...                          ....|...|..+  +..|.||++...+   ..|.|+++........+
T Consensus       483 ~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF  562 (733)
T KOG0650|consen  483 KELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPF  562 (733)
T ss_pred             hhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCch
Confidence                000                          001223344444  3468899987653   56899999877666556


Q ss_pred             cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         124 FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       124 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      ....+.|.++.|+|...+|++++. ..|+|||+..+..+..+.....                  +|..++.+|.|..|+
T Consensus       563 ~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~k------------------wiS~msihp~GDnli  623 (733)
T KOG0650|consen  563 RKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSK------------------WISSMSIHPNGDNLI  623 (733)
T ss_pred             hhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCe------------------eeeeeeecCCCCeEE
Confidence            667888999999998888888876 6899999998877777666555                  899999999999999


Q ss_pred             EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC------C--CCcceeEecccc
Q psy8152         204 VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR------G--KGKPCYKYKGFA  275 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~------~--~~~~~~~~~~h~  275 (444)
                      .++.|+.+..||+.  ...++.+++..|...++.++|++.-.++++|+.||++.||--.      .  .--++..+++|.
T Consensus       624 ~gs~d~k~~WfDld--lsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~  701 (733)
T KOG0650|consen  624 LGSYDKKMCWFDLD--LSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHE  701 (733)
T ss_pred             EecCCCeeEEEEcc--cCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCce
Confidence            99999999999998  5667888899999999999999999999999999999998532      1  023567788887


Q ss_pred             Cc----eeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         276 GC----VKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       276 ~~----i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      ..    |..+.|+|...+|++++.||+|++|
T Consensus       702 ~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  702 KTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             eecccceEeecccCCCceEEecCCCceEEee
Confidence            65    8899999999999999999999998

>KOG4328|consensus

Probab=99.93  E-value=4e-24  Score=184.62  Aligned_cols=288  Identities=11%  Similarity=0.115  Sum_probs=211.8

Q ss_pred             CcccceEEEeeeccCC-cEEEEEEcCCeEEEEeCCCC--ccccceeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEE-SELLIAYSGQKIKIYDTDFK--NFNTNTDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~-~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~  113 (444)
                      -|..+|++++|+|... +.+|+|..-|+|-+||+.+.  .....+....|..+|.++  +| +...+++.+.||+|++-|
T Consensus       184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D  263 (498)
T KOG4328|consen  184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD  263 (498)
T ss_pred             ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence            5789999999996555 67888999999999999522  223344446788888776  55 456799999999999999


Q ss_pred             cCCCCccccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee-eeeeecccceeeEeeeCCCcccccCccce
Q psy8152         114 YKTEPDQWTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       114 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      +++......+..  -...+..+.|+.....++.+..=|.+.+||++++.. ...+..|..                  .|
T Consensus       264 ~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k------------------KI  325 (498)
T KOG4328|consen  264 FEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK------------------KI  325 (498)
T ss_pred             ecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhc------------------cc
Confidence            987754432222  345567788888777777777777999999998554 566666665                  79


Q ss_pred             eEEEEecCC-CEEEEEeCCceEEEEEcCCCCCcc-ceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC----CC
Q psy8152         191 NGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRR-PVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR----GK  264 (444)
Q Consensus       191 ~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~  264 (444)
                      ++|+++|.. .+||+++.|++++|||++.-.... ++.....|...|.+..|||.+-.|++.+.|..|+|||..    . 
T Consensus       326 ~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~-  404 (498)
T KOG4328|consen  326 TSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAK-  404 (498)
T ss_pred             ceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeeccccccc-
Confidence            999999987 789999999999999999222222 355666799999999999998779999999999999983    3 


Q ss_pred             CcceeEeccccC------ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--CceeEEEEcCCCcccccchh
Q psy8152         265 GKPCYKYKGFAG------CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--SRLTSILVRSDFSLENETKK  336 (444)
Q Consensus       265 ~~~~~~~~~h~~------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~  336 (444)
                      ..++.++. |..      .....+|.|+..++++|-.-..|-|+|-..++.+..+...  ..|.++.   .|.     |.
T Consensus       405 ~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn---~~H-----P~  475 (498)
T KOG4328|consen  405 DEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVN---EFH-----PM  475 (498)
T ss_pred             CCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccce---eec-----cc
Confidence            45555555 321      2234589999999999999999999999999877765422  2343332   222     22


Q ss_pred             hh-hccccccCCCccccCCC
Q psy8152         337 EE-QEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       337 ~~-~~~s~~~d~~i~~W~~~  355 (444)
                      .. .++.++..|.|.||.-.
T Consensus       476 ~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  476 RDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             ccceeccCCccceEEEEecC
Confidence            33 34444566777777543

>KOG2445|consensus

Probab=99.93  E-value=1.5e-23  Score=172.33  Aligned_cols=243  Identities=14%  Similarity=0.165  Sum_probs=180.2

Q ss_pred             cccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCC----ccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEc
Q psy8152          85 FGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEP----DQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        85 ~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~  156 (444)
                      +|..-|.+++  +.|+.+++|+.|++|+||+.....    +......|.+.|..+.|.+  -|+.+|+++.|+++.||.-
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            6677777765  569999999999999999975443    3335567999999999966  7999999999999999976


Q ss_pred             CCc---------eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC--CEEEEEeCCceEEEEEcCCCC---Cc
Q psy8152         157 NTT---------KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS--DKVAVCSKQGYVRVYDPKITT---QR  222 (444)
Q Consensus       157 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~---~~  222 (444)
                      ...         ....++....                  ..|+.++|.|..  -.||+++.||.||||+.....   ..
T Consensus        91 ~~~~~~~~~~~Wv~~ttl~Dsr------------------ssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W  152 (361)
T KOG2445|consen   91 QEKSEEAHGRRWVRRTTLVDSR------------------SSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQW  152 (361)
T ss_pred             cccccccccceeEEEEEeecCC------------------cceeEEEecchhcceEEEEeccCcEEEEEecCCccccccc
Confidence            321         1122222222                  269999999864  788999999999999876110   11


Q ss_pred             cceEEEe-------CCCCCeeEEEEccC---CCEEEEEcCC-----CcEEEEEcCCCC---cceeEeccccCceeEEEec
Q psy8152         223 RPVLKVD-------IPDVALSCITTTNQ---SHYVIVGSTT-----GDMMAVDLRGKG---KPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       223 ~~~~~~~-------~~~~~i~~~~~~~~---~~~l~~~~~d-----g~i~iwd~~~~~---~~~~~~~~h~~~i~~~~~s  284 (444)
                      .....+.       .+..+..|+.|+|.   ..+||+|+.+     +.++||.....+   ..+.++.+|..+|+.++|.
T Consensus       153 ~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wA  232 (361)
T KOG2445|consen  153 TLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWA  232 (361)
T ss_pred             hhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeec
Confidence            2222222       35667789999984   5678888776     478899765522   4566778999999999999


Q ss_pred             CCC----CEEEEEECCCcEEEEEcCCC--------------------ceEEEee-cCCceeEEEEcCCCcccccchhhhh
Q psy8152         285 LNE----NLILSVSLDRHFRVHDFHSK--------------------KLLRKDY-MQSRLTSILVRSDFSLENETKKEEQ  339 (444)
Q Consensus       285 ~~~----~~l~s~~~dg~i~vw~~~~~--------------------~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~  339 (444)
                      |+-    .+||+++.|| |+||++...                    +.+..+. |.+.|+.+.|...         +..
T Consensus       233 Pn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmt---------Gti  302 (361)
T KOG2445|consen  233 PNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMT---------GTI  302 (361)
T ss_pred             cccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeee---------eeE
Confidence            963    4899999999 999998731                    1122222 7778888888744         578


Q ss_pred             ccccccCCCccccCCC
Q psy8152         340 EHSEEKGDSDEKYDPE  355 (444)
Q Consensus       340 ~~s~~~d~~i~~W~~~  355 (444)
                      |+|.++||+||+|...
T Consensus       303 LsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  303 LSSTGDDGCVRLWKAN  318 (361)
T ss_pred             EeecCCCceeeehhhh
Confidence            9999999999999866

>KOG0302|consensus

Probab=99.93  E-value=3.1e-24  Score=180.94  Aligned_cols=203  Identities=17%  Similarity=0.271  Sum_probs=163.5

Q ss_pred             cccccEEEE--Ee--CCCeEEEEecCCcEEEEEcCC----------------CCccccccccCCCeEEEEEec-cCCEEE
Q psy8152          85 FGEGDIVGV--SR--YDECILTAVKSGDVKLWRYKT----------------EPDQWTNFNVGPQLECMKHNK-HSNIIA  143 (444)
Q Consensus        85 ~~~~~v~~~--s~--~~~~l~~~~~dg~i~iw~~~~----------------~~~~~~~~~~~~~v~~~~~~~-~~~~l~  143 (444)
                      .|.+.+..+  ++  +..+.++-+..|.|+||++..                .+++.++.+|...=+.++|+| ....|+
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll  228 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL  228 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence            455555544  33  345677778899999999752                234446677888889999999 445688


Q ss_pred             EeeCCCeEEEEEcCCceee---eeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCC
Q psy8152         144 TGGKENDLKLWDLNTTKNI---FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKIT  219 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~  219 (444)
                      +|..-+.|++|...++.-.   ..+.+|..                  .|-.++|+|.. ..|++|+.||+|+|||+| .
T Consensus       229 sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~------------------SVEDLqWSptE~~vfaScS~DgsIrIWDiR-s  289 (440)
T KOG0302|consen  229 SGDCVKGIHLWEPSTGSWKVDQRPFTGHTK------------------SVEDLQWSPTEDGVFASCSCDGSIRIWDIR-S  289 (440)
T ss_pred             cCccccceEeeeeccCceeecCcccccccc------------------chhhhccCCccCceEEeeecCceEEEEEec-C
Confidence            8888899999999886532   22233443                  79999999987 789999999999999999 4


Q ss_pred             CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC--CCcceeEeccccCceeEEEecCCC-CEEEEEECC
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG--KGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLD  296 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~d  296 (444)
                      ...++....+.|...|+.|.|+..-.+||+|+.+|+++|||++.  .++++.+|+-|+.+|++|.|+|.. ..|++++.|
T Consensus       290 ~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D  369 (440)
T KOG0302|consen  290 GPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED  369 (440)
T ss_pred             CCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence            44455555689999999999999888999999999999999986  367899999999999999999965 688899999


Q ss_pred             CcEEEEEcCC
Q psy8152         297 RHFRVHDFHS  306 (444)
Q Consensus       297 g~i~vw~~~~  306 (444)
                      .+|.+||+..
T Consensus       370 ~QitiWDlsv  379 (440)
T KOG0302|consen  370 NQITIWDLSV  379 (440)
T ss_pred             CcEEEEEeec
Confidence            9999999864

>KOG2919|consensus

Probab=99.92  E-value=1.2e-23  Score=173.98  Aligned_cols=265  Identities=12%  Similarity=0.180  Sum_probs=199.8

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc------------cccceeeccccccEEEE---------EeCCCeEEE
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKN------------FNTNTDVSFGEGDIVGV---------SRYDECILT  102 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~------------~~~~~~~~~~~~~v~~~---------s~~~~~l~~  102 (444)
                      -...+.|+ |++..|++-+.|..+++|++...-            ....++... ...|...         .|+..++++
T Consensus        51 f~kgckWS-PDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~e-g~tvydy~wYs~M~s~qP~t~l~a~  128 (406)
T KOG2919|consen   51 FLKGCKWS-PDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQE-GETVYDYCWYSRMKSDQPSTNLFAV  128 (406)
T ss_pred             hhccceeC-CCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEecc-CCEEEEEEeeeccccCCCccceeee
Confidence            34678899 899999999999999999975211            011111111 2333322         266788999


Q ss_pred             EecCCcEEEEEcCCCCccccccc--cCC---CeEEEEEeccCCEEEEeeCCCeEEEEEc-CCceee--eeeecccceeeE
Q psy8152         103 AVKSGDVKLWRYKTEPDQWTNFN--VGP---QLECMKHNKHSNIIATGGKENDLKLWDL-NTTKNI--FSAKNVSHRVLV  174 (444)
Q Consensus       103 ~~~dg~i~iw~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~l~~~~~d~~i~vwd~-~~~~~~--~~~~~~~~~~~~  174 (444)
                      .+.+.-|++||.-+|+....+..  |..   ...+++|+|+|.+|+.|- ...|++||+ +.|...  .....+..    
T Consensus       129 ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k----  203 (406)
T KOG2919|consen  129 SSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGK----  203 (406)
T ss_pred             ccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhccc----
Confidence            99999999999999987654433  443   356899999999998876 579999999 444422  11111100    


Q ss_pred             eeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC-
Q psy8152         175 YSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST-  252 (444)
Q Consensus       175 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-  252 (444)
                               ....+.|.+++|+|.. +.+++++.-.++-||.-.   ...++..+-+|.+.|+.++|.++|+.|++|.. 
T Consensus       204 ---------~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~---~~~pl~llggh~gGvThL~~~edGn~lfsGaRk  271 (406)
T KOG2919|consen  204 ---------FGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD---GRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARK  271 (406)
T ss_pred             ---------ccccceeeeeeccCCCCcceeeecccceeeeEecC---CCCceeeecccCCCeeeEEeccCcCeecccccC
Confidence                     0112358899999977 699999999999999887   88899999999999999999999999999765 


Q ss_pred             CCcEEEEEcCCCCcceeEeccccC-ceeEEEe--cCCCCEEEEEECCCcEEEEEcCC-CceEEEe-ecCCceeEEEEcCC
Q psy8152         253 TGDMMAVDLRGKGKPCYKYKGFAG-CVKDIAC--PLNENLILSVSLDRHFRVHDFHS-KKLLRKD-YMQSRLTSILVRSD  327 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~~h~~-~i~~~~~--s~~~~~l~s~~~dg~i~vw~~~~-~~~~~~~-~~~~~i~~~~~~~~  327 (444)
                      +-.|..||++....++..+..|.. .-..|.|  .|++++|++|+.+|.|++||++. +.....+ .+...++.++++|.
T Consensus       272 ~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~  351 (406)
T KOG2919|consen  272 DDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPI  351 (406)
T ss_pred             CCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcc
Confidence            668999999987788999988866 3344544  58899999999999999999998 6644444 47788899988876

>KOG0307|consensus

Probab=99.92  E-value=1.4e-24  Score=207.30  Aligned_cols=275  Identities=13%  Similarity=0.270  Sum_probs=214.0

Q ss_pred             cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcE----EEEEEcCCeEEEEeCCC----Cccccceeec
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESE----LLIAYSGQKIKIYDTDF----KNFNTNTDVS   84 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~----l~~~~~d~~i~vw~~~~----~~~~~~~~~~   84 (444)
                      +.+..+-||.+..... ...+..+..+.-...-+.++|. +.+..    |+.|..||.|.+|+...    .+.....+..
T Consensus        36 st~~slEifeld~~~~-~~dlk~~~s~~s~~rF~kL~W~-~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~  113 (1049)
T KOG0307|consen   36 STSASLEIFELDFSDE-SSDLKPVGSLQSSNRFNKLAWG-SYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKS  113 (1049)
T ss_pred             ccccccceeeecccCc-cccccccccccccccceeeeec-ccCCCccceeeccccCCceEEecchhhccCcchHHHhhhc
Confidence            3355566665543221 1112233333446678899998 45554    88889999999999754    2222233445


Q ss_pred             cccccEEEEE--e-CCCeEEEEecCCcEEEEEcCCCCccccc--cccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC
Q psy8152          85 FGEGDIVGVS--R-YDECILTAVKSGDVKLWRYKTEPDQWTN--FNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        85 ~~~~~v~~~s--~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~  158 (444)
                      .|.+.|.++.  + .+++||+|+.+|.|.|||+...+.-...  ......|.+++|+. ...+|++++.+|.+.|||++.
T Consensus       114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~  193 (1049)
T KOG0307|consen  114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK  193 (1049)
T ss_pred             ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccC
Confidence            7889998774  3 4669999999999999999875544322  22467899999998 667899999999999999999


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCc---eEEEEEcCCCCCccceEEEeCCCCC
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQG---YVRVYDPKITTQRRPVLKVDIPDVA  234 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~  234 (444)
                      .+++..+..+..                +..+..++|+|+. ..|++++.|.   .|.+||+|  ....+++.+.+|...
T Consensus       194 ~~pii~ls~~~~----------------~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR--~assP~k~~~~H~~G  255 (1049)
T KOG0307|consen  194 KKPIIKLSDTPG----------------RMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR--FASSPLKILEGHQRG  255 (1049)
T ss_pred             CCcccccccCCC----------------ccceeeeeeCCCCceeeeeecCCCCCceeEeeccc--ccCCchhhhcccccc
Confidence            988877766655                2358899999998 6677776654   69999999  566788888999999


Q ss_pred             eeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCc
Q psy8152         235 LSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       235 i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~  308 (444)
                      |.++.|++.+ .+|++++.|+.|.+|+..+ ++.+..+......+..+.|+|... +|++++.||.|-||.+.+..
T Consensus       256 ilslsWc~~D~~lllSsgkD~~ii~wN~~t-gEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  256 ILSLSWCPQDPRLLLSSGKDNRIICWNPNT-GEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             eeeeccCCCCchhhhcccCCCCeeEecCCC-ceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            9999999976 8999999999999999999 999999998788999999999875 88999999999999997754

>KOG4378|consensus

Probab=99.91  E-value=3.8e-23  Score=180.35  Aligned_cols=251  Identities=16%  Similarity=0.263  Sum_probs=192.7

Q ss_pred             ccEEEe--cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           7 YNIYIG--SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         7 ~~l~~g--~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++|+++  +.|..+++|.-....   ..++.+...+ ...-.|++.. ....++++|+..+.|+|||++...+.+.+  .
T Consensus        46 n~lvvas~~gdk~~~~~~K~g~~---~~Vp~~~k~~-gd~~~Cv~~~-s~S~y~~sgG~~~~Vkiwdl~~kl~hr~l--k  118 (673)
T KOG4378|consen   46 NFLVVASMAGDKVMRIKEKDGKT---PEVPRVRKLT-GDNAFCVACA-SQSLYEISGGQSGCVKIWDLRAKLIHRFL--K  118 (673)
T ss_pred             ceEEEeecCCceeEEEecccCCC---Cccceeeccc-cchHHHHhhh-hcceeeeccCcCceeeehhhHHHHHhhhc--c
Confidence            335555  456778888644332   1123333221 2244555544 34579999999999999999855455544  4


Q ss_pred             cccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCcccccccc--CCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152          85 FGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFNV--GPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        85 ~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      +|...|+++.  ....+||+++..|.|.|..+.++.... .+.|  ...|.-+.|+| ...+|.+++.+|.|.+||+...
T Consensus       119 dh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt-~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~  197 (673)
T KOG4378|consen  119 DHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTT-TFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGM  197 (673)
T ss_pred             CCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccc-ceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCC
Confidence            8889999885  457899999999999999999988774 4444  34567899999 5567778999999999999987


Q ss_pred             eeeeeee-cccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         160 KNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       160 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      .+++.+. .|..                  +...|+|+|.. .+|++.+.|..|.+||++   ..+....+. ...+.+.
T Consensus       198 sp~~~~~~~HsA------------------P~~gicfspsne~l~vsVG~Dkki~~yD~~---s~~s~~~l~-y~~Plst  255 (673)
T KOG4378|consen  198 SPIFHASEAHSA------------------PCRGICFSPSNEALLVSVGYDKKINIYDIR---SQASTDRLT-YSHPLST  255 (673)
T ss_pred             CcccchhhhccC------------------CcCcceecCCccceEEEecccceEEEeecc---cccccceee-ecCCcce
Confidence            7776553 3333                  78999999977 788899999999999999   555555443 4567899


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      ++|+++|.+|++|+..|.|+.||++....++..+..|...|++++|-|..
T Consensus       256 vaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  256 VAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             eeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence            99999999999999999999999998678999999999999999997653

>KOG1009|consensus

Probab=99.91  E-value=1.3e-22  Score=172.89  Aligned_cols=299  Identities=11%  Similarity=0.096  Sum_probs=216.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccce--eeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--------C
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCII--KNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTD--------F   74 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~--~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~--------~   74 (444)
                      .+.+++|+.|..|++|.+.......  ..+.-+..+ .|..+|+++.|+ |++..|++|+.+|.|.+|...        +
T Consensus        26 ~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~-p~gelLASg~D~g~v~lWk~~~~~~~~~d~  104 (434)
T KOG1009|consen   26 LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFS-PDGELLASGGDGGEVFLWKQGDVRIFDADT  104 (434)
T ss_pred             ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEc-CCcCeeeecCCCceEEEEEecCcCCccccc
Confidence            3489999999999999986654321  123333333 899999999999 899999999999999999865        2


Q ss_pred             ------CccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee
Q psy8152          75 ------KNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG  146 (444)
Q Consensus        75 ------~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  146 (444)
                            ...+....+.+|...++.  ++|++.++++++.|..+++||+..|+.......|...+..++|.|-++++++-+
T Consensus       105 e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s  184 (434)
T KOG1009|consen  105 EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKS  184 (434)
T ss_pred             hhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhc
Confidence                  112223344567677755  478999999999999999999999999988889999999999999999999999


Q ss_pred             CCCeEEEEEcCCceeeeeeecccceeeEeeeCCC-------cccccCccceeEEEEecCCCEEEEEeC----C-----ce
Q psy8152         147 KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD-------EFDLRRPVWVNGISFLPNSDKVAVCSK----Q-----GY  210 (444)
Q Consensus       147 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~l~~~~~----d-----~~  210 (444)
                      .|...+.+.+...+.++....  .........+.       ..+.+.+...+.++|+|+|.+|++...    .     ++
T Consensus       185 ~dr~~~~~~~~~~~~~~~~~~--~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~  262 (434)
T KOG1009|consen  185 SDRHPEGFSAKLKQVIKRHGL--DIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNT  262 (434)
T ss_pred             cCcccceeeeeeeeeeeeeee--eEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeece
Confidence            998788877765443332220  00000000000       012333445778899999998886533    1     23


Q ss_pred             EEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-----------------CCEEEEEcCCCcEEEEEcCCCCcceeEec-
Q psy8152         211 VRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-----------------SHYVIVGSTTGDMMAVDLRGKGKPCYKYK-  272 (444)
Q Consensus       211 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-  272 (444)
                      .++|+-.  ...+|+..+.....+...+.|+|-                 .+.+++....+.++|||..+ ..++.... 
T Consensus       263 tYvfsrk--~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~-~~P~~~v~n  339 (434)
T KOG1009|consen  263 SYVFSRK--DLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQT-LEPLAVVDN  339 (434)
T ss_pred             eEeeccc--cccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEecccc-ccceEEEee
Confidence            4555544  455677777777766666766651                 12333333455799999998 78887776 


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                      -|-..|+.++|+++|.+|+..+.||...+--+...++-
T Consensus       340 ihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg  377 (434)
T KOG1009|consen  340 IHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG  377 (434)
T ss_pred             eeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence            48899999999999999999999999888888776653

>KOG1188|consensus

Probab=99.91  E-value=9.9e-23  Score=169.94  Aligned_cols=270  Identities=10%  Similarity=0.178  Sum_probs=195.3

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ..++++.+.|.|++|+..+++.    +..++  +|...+..++|... ....+.+|+.||+|++||+........+....
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~----l~~fk--~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~  114 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQL----LEEFK--GPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ  114 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhh----hheec--CCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence            5699999999999999998764    23333  78888899999822 46788899999999999999888777776656


Q ss_pred             cc-ccEEEEEe--CCCeEEEEec----CCcEEEEEcCCCCc-cccc-cccCCCeEEEEEec-cCCEEEEeeCCCeEEEEE
Q psy8152          86 GE-GDIVGVSR--YDECILTAVK----SGDVKLWRYKTEPD-QWTN-FNVGPQLECMKHNK-HSNIIATGGKENDLKLWD  155 (444)
Q Consensus        86 ~~-~~v~~~s~--~~~~l~~~~~----dg~i~iw~~~~~~~-~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd  155 (444)
                      +. .+..+|..  .++.+++|+.    +-.|.+||++..+. +..+ ..|...|++++|+| +.++|++|+.||.|.+||
T Consensus       115 ~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD  194 (376)
T KOG1188|consen  115 QSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD  194 (376)
T ss_pred             CCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeee
Confidence            55 45566654  5666776653    56799999998766 4433 34999999999999 889999999999999999


Q ss_pred             cCCce---eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCC
Q psy8152         156 LNTTK---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP  231 (444)
Q Consensus       156 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  231 (444)
                      +....   .+...-.+..                  .|.++.|+.++ +.|.+-+...+..+|++.   ...+...+...
T Consensus       195 ~~~d~EeDaL~~viN~~s------------------SI~~igw~~~~ykrI~clTH~Etf~~~ele---~~~~~~~~~~~  253 (376)
T KOG1188|consen  195 TKKDNEEDALLHVINHGS------------------SIHLIGWLSKKYKRIMCLTHMETFAIYELE---DGSEETWLENP  253 (376)
T ss_pred             cCCCcchhhHHHhhcccc------------------eeeeeeeecCCcceEEEEEccCceeEEEcc---CCChhhcccCc
Confidence            98632   2222222222                  59999999887 678888999999999998   33333333211


Q ss_pred             -------------CCCeeEEEEcc-CCCEEEE-EcCCCcEEEEEcCC-----CCcceeEecc-ccCceeEEEecCCCCEE
Q psy8152         232 -------------DVALSCITTTN-QSHYVIV-GSTTGDMMAVDLRG-----KGKPCYKYKG-FAGCVKDIACPLNENLI  290 (444)
Q Consensus       232 -------------~~~i~~~~~~~-~~~~l~~-~~~dg~i~iwd~~~-----~~~~~~~~~~-h~~~i~~~~~s~~~~~l  290 (444)
                                   ..-|.+  .+| +..+++. |+.-|...++-+..     ..+.+..+.+ |...|+++.|...+.++
T Consensus       254 ~~~~~d~r~~~~~dY~I~~--~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l  331 (376)
T KOG1188|consen  254 DVSADDLRKEDNCDYVINE--HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVL  331 (376)
T ss_pred             cchhhhHHhhhhhhheeec--ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhccccee
Confidence                         111111  223 2334444 43356666654431     1355666775 77788999998888999


Q ss_pred             EEEECCCcEEEEEcC
Q psy8152         291 LSVSLDRHFRVHDFH  305 (444)
Q Consensus       291 ~s~~~dg~i~vw~~~  305 (444)
                      ++|+.||.+.+|...
T Consensus       332 ~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  332 YTGGEDGLLQAWKVE  346 (376)
T ss_pred             eccCCCceEEEEecC
Confidence            999999999999863

>KOG0307|consensus

Probab=99.91  E-value=1e-23  Score=201.45  Aligned_cols=233  Identities=15%  Similarity=0.198  Sum_probs=187.7

Q ss_pred             eEEEEecCCcEEEEEcCC---C---CccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccce
Q psy8152          99 CILTAVKSGDVKLWRYKT---E---PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHR  171 (444)
Q Consensus        99 ~l~~~~~dg~i~iw~~~~---~---~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~  171 (444)
                      +|+.|..||.|.+|+...   +   ..+.....|.+.|..+.|++ .+++||+|+.+|.|.|||+.+.+.-.......  
T Consensus        82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~--  159 (1049)
T KOG0307|consen   82 LIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQA--  159 (1049)
T ss_pred             eeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCC--
Confidence            488899999999999764   2   22335667999999999999 77899999999999999998854433332111  


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC--CeeEEEEccCC-CEE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV--ALSCITTTNQS-HYV  247 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~-~~l  247 (444)
                                    ....|.+++|+..- ..|++++.+|++.|||++   ..+++..+..+..  .+..++|+|+. ..|
T Consensus       160 --------------~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr---~~~pii~ls~~~~~~~~S~l~WhP~~aTql  222 (1049)
T KOG0307|consen  160 --------------PPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR---KKKPIIKLSDTPGRMHCSVLAWHPDHATQL  222 (1049)
T ss_pred             --------------CcccceEeccchhhhHHhhccCCCCCceecccc---CCCcccccccCCCccceeeeeeCCCCceee
Confidence                          12369999998765 678899999999999999   6677777765543  47789999984 455


Q ss_pred             EEEcCCC---cEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEE
Q psy8152         248 IVGSTTG---DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSI  322 (444)
Q Consensus       248 ~~~~~dg---~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~  322 (444)
                      ++++.|.   .|.+||+|....+++++.+|...|.++.|++.+ .+|+|++.|+.|.+|+..+++.+..+. ....+..+
T Consensus       223 ~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv  302 (1049)
T KOG0307|consen  223 LVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDV  302 (1049)
T ss_pred             eeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeee
Confidence            6655553   599999998778899999999999999999977 899999999999999999999999887 45668888


Q ss_pred             EEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         323 LVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      .|++...        ..++.++-+|.|.|+.+....
T Consensus       303 ~w~pr~P--------~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  303 QWCPRNP--------SVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             eecCCCc--------chhhhheeccceeeeeeecCC
Confidence            8876532        578888999999999988654

>KOG1034|consensus

Probab=99.90  E-value=9e-23  Score=169.28  Aligned_cols=289  Identities=10%  Similarity=0.111  Sum_probs=210.5

Q ss_pred             CcccceEEEeeec----cCCcEEEEEEcCCeEEEEeCCCCc---cccceeeccccccEEEEE--e----CCCeEEEEecC
Q psy8152          40 TNKASVLALNWGN----VEESELLIAYSGQKIKIYDTDFKN---FNTNTDVSFGEGDIVGVS--R----YDECILTAVKS  106 (444)
Q Consensus        40 ~h~~~v~~~~~~~----~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~~~~v~~~s--~----~~~~l~~~~~d  106 (444)
                      .|+.+|..++|++    .....+++++. ..+.+|.....-   .++.+.-..|......++  .    .+.++|+|+.-
T Consensus        36 d~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~  114 (385)
T KOG1034|consen   36 DHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL  114 (385)
T ss_pred             cCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence            7899999999983    12345566555 688899876433   233332223334443332  2    24689999999


Q ss_pred             CcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         107 GDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       107 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      |.|+|.|+.++++...+.+|...|+.+.++| ..+++++++.|..|++|++++..++..+.+...               
T Consensus       115 GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~eg---------------  179 (385)
T KOG1034|consen  115 GVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEG---------------  179 (385)
T ss_pred             eEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccccc---------------
Confidence            9999999999999999999999999999999 778999999999999999999999998876655               


Q ss_pred             CccceeEEEEecCCCEEEEEeCCceEEEEEcCC---------------CCCccc---------eE-EEeCCCCCeeEEEE
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI---------------TTQRRP---------VL-KVDIPDVALSCITT  240 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------------~~~~~~---------~~-~~~~~~~~i~~~~~  240 (444)
                      |+..|.++.|++++.+|++++.|.+|++|++..               .++.++         .+ +-..|...|-|+.|
T Consensus       180 HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw  259 (385)
T KOG1034|consen  180 HRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW  259 (385)
T ss_pred             ccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHH
Confidence            455899999999999999999999999999971               000100         10 12245666667777


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCc-------------ceeEeccccCceeEEE--ecCCCCEEEEEECCCcEEEEEcC
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGK-------------PCYKYKGFAGCVKDIA--CPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~-------------~~~~~~~h~~~i~~~~--~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      -  |.++++-+-++.|..|..-...+             .+.++.-....|.-+.  |.|-++.||.|...|.|++||+.
T Consensus       260 ~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~  337 (385)
T KOG1034|consen  260 F--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLD  337 (385)
T ss_pred             H--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECC
Confidence            3  67999988888999998721022             2233333344566664  45667899999999999999999


Q ss_pred             CCceE--EEeec---CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         306 SKKLL--RKDYM---QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       306 ~~~~~--~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ..++.  .++.|   ...|...+|+.+         +..++...+|++|--||..
T Consensus       338 ~~ep~~~ttl~~s~~~~tVRQ~sfS~d---------gs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  338 NNEPPKCTTLTHSKSGSTVRQTSFSRD---------GSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             CCCCccCceEEeccccceeeeeeeccc---------CcEEEEEeCCCcEEEEEee
Confidence            86652  22222   344666776644         5678888899999888753

>KOG1034|consensus

Probab=99.90  E-value=6.4e-22  Score=164.26  Aligned_cols=296  Identities=16%  Similarity=0.159  Sum_probs=206.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc---CCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV---EESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      .+.-++++......+.+|....... ...++......|......++|+-.   ...+||+|+.-|.|+|.|+.++++...
T Consensus        52 ~~e~~vfatvG~~rvtiy~c~~d~~-ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~  130 (385)
T KOG1034|consen   52 CDEPQVFATVGGNRVTIYECPGDGG-IRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKN  130 (385)
T ss_pred             CCCCceEEEeCCcEEEEEEECCccc-eeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccc
Confidence            3444555555566889998765542 455666665568888899998731   245788888889999999999999998


Q ss_pred             eeeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCCccccc---cccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152          81 TDVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEPDQWTN---FNVGPQLECMKHNKHSNIIATGGKENDLKLW  154 (444)
Q Consensus        81 ~~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  154 (444)
                      +.  +|...|..+  .|. .+++++++.|..|++|++++..++..+   .+|...|.++.|++++.+|++++.|.+|++|
T Consensus       131 ~~--ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W  208 (385)
T KOG1034|consen  131 YR--GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLW  208 (385)
T ss_pred             ee--ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEE
Confidence            87  556666655  664 578999999999999999999998643   3499999999999999999999999999999


Q ss_pred             EcCCceeeeeee------cccce--eeE-eeeCCC-cccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC------
Q psy8152         155 DLNTTKNIFSAK------NVSHR--VLV-YSVKPD-EFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI------  218 (444)
Q Consensus       155 d~~~~~~~~~~~------~~~~~--~~~-~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------  218 (444)
                      ++...+....+.      ..+..  ... ...-|+ +..--|+..|-|+.|-  |.++++-+-++.|..|....      
T Consensus       209 ~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~  286 (385)
T KOG1034|consen  209 RLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIH  286 (385)
T ss_pred             ecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhh
Confidence            998532111111      00000  000 000010 0111233346666663  57899989999999998720      


Q ss_pred             -----CCCccceEEEeCCCCCeeEEEE--ccCCCEEEEEcCCCcEEEEEcCCCCcce--eEecc--ccCceeEEEecCCC
Q psy8152         219 -----TTQRRPVLKVDIPDVALSCITT--TNQSHYVIVGSTTGDMMAVDLRGKGKPC--YKYKG--FAGCVKDIACPLNE  287 (444)
Q Consensus       219 -----~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~--h~~~i~~~~~s~~~  287 (444)
                           ......+..+......|.-+.|  .|-++.||.|...|.|++||++. ..+.  .++..  ....|...+|+.++
T Consensus       287 ~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~-~ep~~~ttl~~s~~~~tVRQ~sfS~dg  365 (385)
T KOG1034|consen  287 NVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDN-NEPPKCTTLTHSKSGSTVRQTSFSRDG  365 (385)
T ss_pred             ccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCC-CCCccCceEEeccccceeeeeeecccC
Confidence                 0011122334444455555554  56688999999999999999998 5442  22221  24578999999999


Q ss_pred             CEEEEEECCCcEEEEEcC
Q psy8152         288 NLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       288 ~~l~s~~~dg~i~vw~~~  305 (444)
                      .+|+..+.|++|.-||.-
T Consensus       366 s~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  366 SILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             cEEEEEeCCCcEEEEEee
Confidence            999999999999999853

>KOG1007|consensus

Probab=99.90  E-value=5.2e-22  Score=161.98  Aligned_cols=274  Identities=15%  Similarity=0.246  Sum_probs=203.6

Q ss_pred             ccEEEec----CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-------CeEEEEeCCCC
Q psy8152           7 YNIYIGS----STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-------QKIKIYDTDFK   75 (444)
Q Consensus         7 ~~l~~g~----~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-------~~i~vw~~~~~   75 (444)
                      -.|++|.    .++.|.+..+..+...   +.....+.|.+.|+.++-+|.+...|+++..+       ..+.||.+...
T Consensus        27 icFlvgTnslK~dNqVhll~~d~e~s~---l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~  103 (370)
T KOG1007|consen   27 ICFLVGTNSLKEDNQVHLLRLDSEGSE---LLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEP  103 (370)
T ss_pred             eEEEEeccccCCcceeEEEEecCccch---hhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccc
Confidence            3455664    4688888888766531   12122227889999999997777777776552       35779988532


Q ss_pred             ---------ccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCcc-c-----cccccCCCeEEEEEec-
Q psy8152          76 ---------NFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQ-W-----TNFNVGPQLECMKHNK-  137 (444)
Q Consensus        76 ---------~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~-----~~~~~~~~v~~~~~~~-  137 (444)
                               +++..+.. .+-+.+.+  +.|++..+++-. +..|.+|++..+..+ .     ....+....++-+|+| 
T Consensus       104 ~~~S~~~tlE~v~~Ldt-eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspH  181 (370)
T KOG1007|consen  104 LGQSNSSTLECVASLDT-EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPH  181 (370)
T ss_pred             cCccccchhhHhhcCCH-HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCC
Confidence                     22333321 22334544  478888888765 789999999876552 2     1223566788899999 


Q ss_pred             -cCCEEEEeeCCCeEEEEEcCCceeeeeeec-ccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEE
Q psy8152         138 -HSNIIATGGKENDLKLWDLNTTKNIFSAKN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVY  214 (444)
Q Consensus       138 -~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~  214 (444)
                       +++.+++.+ ++++..||+++.++...+.. |..                  .|+.+.|+|+. .+|++|+.||.|+||
T Consensus       182 Hdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq------------------~vrdlDfNpnkq~~lvt~gDdgyvriW  242 (370)
T KOG1007|consen  182 HDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQ------------------RVRDLDFNPNKQHILVTCGDDGYVRIW  242 (370)
T ss_pred             CccceEEEeC-CCcEEEEEccchhhhcchhhhhcc------------------eeeeccCCCCceEEEEEcCCCccEEEE
Confidence             888888766 68999999999877766643 334                  69999999987 678899999999999


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCC----------------------------CC
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRG----------------------------KG  265 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~----------------------------~~  265 (444)
                      |.|  ....++..+.+|...|.++.|+|. .++|++|+.|..|.+|-...                            +.
T Consensus       243 D~R--~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~d  320 (370)
T KOG1007|consen  243 DTR--KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQD  320 (370)
T ss_pred             ecc--CCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccc
Confidence            999  678899999999999999999996 56888999999999996542                            12


Q ss_pred             cceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCC
Q psy8152         266 KPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       266 ~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~  306 (444)
                      ..+.++..|...|.+++||.-.+ .+|+-+.||++.|=.+..
T Consensus       321 g~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r  362 (370)
T KOG1007|consen  321 GQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR  362 (370)
T ss_pred             cccccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence            34456778999999999997666 677889999998876653

>KOG1334|consensus

Probab=99.89  E-value=1.4e-22  Score=176.65  Aligned_cols=297  Identities=13%  Similarity=0.097  Sum_probs=220.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEe--CCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSR--YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~--~~~~l~~~~~dg~i~iw~~~  115 (444)
                      .|.+.|..|.|+ ..+..|++|+.|..|.+||...++....|. .+|...|..  |-|  +.+.|++++.||.|++=.+.
T Consensus       140 ~H~GcVntV~FN-~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~-SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~  217 (559)
T KOG1334|consen  140 KHKGCVNTVHFN-QRGDVLASGSDDLQVVVWDWVSGSPKLSFE-SGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL  217 (559)
T ss_pred             CCCCccceeeec-ccCceeeccCccceEEeehhhccCcccccc-cccccchhhhhccCCCCCcCceeccccCceeeeeec
Confidence            899999999999 899999999999999999999988888876 366666543  444  34679999999999988754


Q ss_pred             CCCcc---ccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         116 TEPDQ---WTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       116 ~~~~~---~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                      ....+   ..+..|.++|.-++.-| ....|.+++.|+.+.-+|++++.+...+.....            +.......+
T Consensus       218 ~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~------------~~~~~v~L~  285 (559)
T KOG1334|consen  218 ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREA------------DEKERVGLY  285 (559)
T ss_pred             cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeecc------------CCccceeee
Confidence            33222   24566999999999999 778899999999999999998665433321111            001123477


Q ss_pred             EEEEecCC-CEEEEEeCCceEEEEEcCC---CCCccceEEEeC------CCCCeeEEEEccCCCEEEEEcCCCcEEEEEc
Q psy8152         192 GISFLPNS-DKVAVCSKQGYVRVYDPKI---TTQRRPVLKVDI------PDVALSCITTTNQSHYVIVGSTTGDMMAVDL  261 (444)
Q Consensus       192 ~~~~~~~~-~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  261 (444)
                      .++..|.. ..+++++.|..+++||.+.   .....++.++..      ..-.|++++|+.++.-|++...|-.|++|.-
T Consensus       286 ~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~  365 (559)
T KOG1334|consen  286 TIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNK  365 (559)
T ss_pred             eEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecc
Confidence            88888877 6899999999999999982   111112333322      2346999999988878888888888999953


Q ss_pred             CC-CC----------cceeE-eccccC--ceeEEEe-cCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEc
Q psy8152         262 RG-KG----------KPCYK-YKGFAG--CVKDIAC-PLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVR  325 (444)
Q Consensus       262 ~~-~~----------~~~~~-~~~h~~--~i~~~~~-s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~  325 (444)
                      .. .+          ..+.. ++||..  .|..+-| -|...|+++|+.-|.|.||+-.+++++.-+. -..-|+|+.-.
T Consensus       366 ~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpH  445 (559)
T KOG1334|consen  366 SMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPH  445 (559)
T ss_pred             ccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCC
Confidence            32 01          22233 668854  5777755 5778999999999999999999999887655 22357777544


Q ss_pred             CCCcccccchhhhhccccccCCCccccCCCcccc
Q psy8152         326 SDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       326 ~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~  359 (444)
                      |         --..|+|.+-|..||||.....+.
T Consensus       446 P---------~~PvLAsSGid~DVKIWTP~~~er  470 (559)
T KOG1334|consen  446 P---------HLPVLASSGIDHDVKIWTPLTAER  470 (559)
T ss_pred             C---------CCchhhccCCccceeeecCCcccc
Confidence            3         346899999999999999865443

>KOG0290|consensus

Probab=99.89  E-value=1.5e-21  Score=159.43  Aligned_cols=265  Identities=18%  Similarity=0.238  Sum_probs=192.2

Q ss_pred             ccceEEEeeec--cCCcEEEEEEc----CCeEEEEeCC--CCccccceeeccccccEEEE--EeCC-----CeEEEEecC
Q psy8152          42 KASVLALNWGN--VEESELLIAYS----GQKIKIYDTD--FKNFNTNTDVSFGEGDIVGV--SRYD-----ECILTAVKS  106 (444)
Q Consensus        42 ~~~v~~~~~~~--~~~~~l~~~~~----d~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~--s~~~-----~~l~~~~~d  106 (444)
                      .-.++++.|+.  ....+|+.|+.    .+.|.|..+.  +++.+..-. ..|.-+++.+  .|+.     .+||++  +
T Consensus        44 p~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~-fd~~YP~tK~~wiPd~~g~~pdlLATs--~  120 (364)
T KOG0290|consen   44 PWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDAN-FDHPYPVTKLMWIPDSKGVYPDLLATS--S  120 (364)
T ss_pred             CCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCC-CCCCCCccceEecCCccccCcchhhcc--c
Confidence            45678889982  23567888875    3667766553  444443322 2566677665  4443     345543  3


Q ss_pred             CcEEEEEcCC--CCccc-------cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCcee---eeeeecccceee
Q psy8152         107 GDVKLWRYKT--EPDQW-------TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN---IFSAKNVSHRVL  173 (444)
Q Consensus       107 g~i~iw~~~~--~~~~~-------~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~  173 (444)
                      ..+|+|.+..  .+...       +...+.++++++.|+. +.++|.+++-|-++.|||+.++..   ...+..|..   
T Consensus       121 D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDK---  197 (364)
T KOG0290|consen  121 DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDK---  197 (364)
T ss_pred             CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCc---
Confidence            3899999873  21110       2334678999999999 899999999999999999998633   445566666   


Q ss_pred             EeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEc
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGS  251 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~  251 (444)
                                     .|..|+|...+ +.||+.+.||.||+||+|.-.....++.-.....+...++|++. .+++|+-.
T Consensus       198 ---------------EV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~  262 (364)
T KOG0290|consen  198 ---------------EVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFA  262 (364)
T ss_pred             ---------------ceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhh
Confidence                           79999999876 88999999999999999921112222322233567888999885 57777743


Q ss_pred             -CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCc------eEEEeecCCceeEEE
Q psy8152         252 -TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKK------LLRKDYMQSRLTSIL  323 (444)
Q Consensus       252 -~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~------~~~~~~~~~~i~~~~  323 (444)
                       ....|.|.|++.|..++.++++|.+.|+.++|.|.. ..|++++.|..+.+||+...-      ++......+.|+.+.
T Consensus       263 ~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~  342 (364)
T KOG0290|consen  263 MDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQ  342 (364)
T ss_pred             cCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeee
Confidence             445699999999999999999999999999999976 699999999999999997622      222223677899999


Q ss_pred             EcCC
Q psy8152         324 VRSD  327 (444)
Q Consensus       324 ~~~~  327 (444)
                      |++.
T Consensus       343 Ws~~  346 (364)
T KOG0290|consen  343 WSSS  346 (364)
T ss_pred             eccc
Confidence            8865

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.89  E-value=1.4e-19  Score=164.89  Aligned_cols=297  Identities=9%  Similarity=0.097  Sum_probs=187.0

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCC-CCccc--cceeec
Q psy8152           9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY-SGQKIKIYDTD-FKNFN--TNTDVS   84 (444)
Q Consensus         9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~-~~~~~--~~~~~~   84 (444)
                      .++...++.|++|++.+...    +..++.+.+.+....++++ |++++|++++ .++.|.+|++. ++...  ..... 
T Consensus         5 y~~~~~~~~I~~~~~~~~g~----l~~~~~~~~~~~~~~l~~s-pd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~-   78 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGA----LTLLQVVDVPGQVQPMVIS-PDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPL-   78 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCc----eeeeeEEecCCCCccEEEC-CCCCEEEEEECCCCcEEEEEECCCCceEEeeeecC-
Confidence            34447789999999964321    2233333345667889999 7999887765 47899999986 33332  22211 


Q ss_pred             cccccEEEEEeCCCeEEEEec-CCcEEEEEcCCCC-ccc--cccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCc
Q psy8152          85 FGEGDIVGVSRYDECILTAVK-SGDVKLWRYKTEP-DQW--TNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTT  159 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~-~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~  159 (444)
                      .....-..++|++++|++++. ++.|.+|++.... ...  ....+.....+++++|+++++++++ .++.|.+||+.+.
T Consensus        79 ~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~  158 (330)
T PRK11028         79 PGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD  158 (330)
T ss_pred             CCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence            112334667899998888765 7899999997432 211  1222334567889999998886555 5699999999863


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCC-CCCccceEEEeCC------
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKI-TTQRRPVLKVDIP------  231 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~------  231 (444)
                      ..+........     ...       .......++|+|++++++++.. +++|.+|++.. ......+..+...      
T Consensus       159 g~l~~~~~~~~-----~~~-------~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~  226 (330)
T PRK11028        159 GHLVAQEPAEV-----TTV-------EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSD  226 (330)
T ss_pred             CcccccCCCce-----ecC-------CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCC
Confidence            32211000000     000       0013678999999999887766 89999999971 1122333333321      


Q ss_pred             CCCeeEEEEccCCCEEEEEcC-CCcEEEEEcCCCCcceeEecccc---CceeEEEecCCCCEEEEEEC-CCcEEEEEcC-
Q psy8152         232 DVALSCITTTNQSHYVIVGST-TGDMMAVDLRGKGKPCYKYKGFA---GCVKDIACPLNENLILSVSL-DRHFRVHDFH-  305 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~h~---~~i~~~~~s~~~~~l~s~~~-dg~i~vw~~~-  305 (444)
                      ......+.|+|++++|+++.. ++.|.+|++.. .....++.++.   .....++|+|+|++|+++.. +++|.+|++. 
T Consensus       227 ~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~-~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        227 TRWAADIHITPDGRHLYACDRTASLISVFSVSE-DGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             CccceeEEECCCCCEEEEecCCCCeEEEEEEeC-CCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            112335889999999999854 68999999976 33222222221   24567899999999988775 8999999875 


Q ss_pred             -CCce--EEEeecCCceeEEEE
Q psy8152         306 -SKKL--LRKDYMQSRLTSILV  324 (444)
Q Consensus       306 -~~~~--~~~~~~~~~i~~~~~  324 (444)
                       ++.+  +.++.......++++
T Consensus       306 ~~g~l~~~~~~~~g~~P~~~~~  327 (330)
T PRK11028        306 ETGLLTELGRYAVGQGPMWVSV  327 (330)
T ss_pred             CCCcEEEccccccCCCceEEEE
Confidence             3443  223334444555554

>KOG1538|consensus

Probab=99.89  E-value=3.2e-21  Score=174.24  Aligned_cols=265  Identities=12%  Similarity=0.179  Sum_probs=201.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|+.+..+ .+.+||...+..    ++.++  +|+..|+|++|+ .+|..+++|+.|..|.+|+.+-.-   .++ 
T Consensus        22 PDGsqL~lAAg~-rlliyD~ndG~l----lqtLK--gHKDtVycVAys-~dGkrFASG~aDK~VI~W~~klEG---~Lk-   89 (1081)
T KOG1538|consen   22 PDGTQLILAAGS-RLLVYDTSDGTL----LQPLK--GHKDTVYCVAYA-KDGKRFASGSADKSVIIWTSKLEG---ILK-   89 (1081)
T ss_pred             CCCceEEEecCC-EEEEEeCCCccc----ccccc--cccceEEEEEEc-cCCceeccCCCceeEEEecccccc---eee-
Confidence            345566655544 789999998875    35555  999999999999 799999999999999999854322   222 


Q ss_pred             ccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      ..|...|.+++  |-...|++++.+ ..-+|........  -......|.+++|..+|++|+.|-.+|+|.+-+-. ++.
T Consensus        90 YSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~--K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEe  165 (1081)
T KOG1538|consen   90 YSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS--KHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEE  165 (1081)
T ss_pred             eccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH--hhhhheeEEEeeecCCCcEEEEeccCceEEeecCC-CCc
Confidence            26777777775  556778888765 5678887654433  23345678899999999999999999999998644 333


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-----CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-----DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                      ...+..+++               .+.+|.+++|+|..     ..+++.....++.+|.+.    ++.+-.-+.-.-...
T Consensus       166 k~~I~Rpgg---------------~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls----G~~Igk~r~L~FdP~  226 (1081)
T KOG1538|consen  166 KVKIERPGG---------------SNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS----GKQIGKDRALNFDPC  226 (1081)
T ss_pred             ceEEeCCCC---------------CCCCceEEEecCCCCCCccceEEEEeccceeEEEEec----ceeecccccCCCCch
Confidence            333332221               12379999999864     578888888899999887    333332223333457


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      |+.+.|+|.|++.|+.|+.+.+|-. . |-.+.++......|+.++..|++++++.|+.||+|..|++-
T Consensus       227 CisYf~NGEy~LiGGsdk~L~~fTR-~-GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  227 CISYFTNGEYILLGGSDKQLSLFTR-D-GVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             hheeccCCcEEEEccCCCceEEEee-c-CeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            8999999999999999999999974 4 78888887778899999999999999999999999999874

>KOG0290|consensus

Probab=99.88  E-value=1.2e-20  Score=154.25  Aligned_cols=272  Identities=13%  Similarity=0.176  Sum_probs=194.1

Q ss_pred             CcccEEEec----CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCC-----cEEEEEEcCCeEEEEeCCC-
Q psy8152           5 DDYNIYIGS----STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEE-----SELLIAYSGQKIKIYDTDF-   74 (444)
Q Consensus         5 ~~~~l~~g~----~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~~l~~~~~d~~i~vw~~~~-   74 (444)
                      .+.+|++|+    ..+.|.|..+.....   .+.....+.|.-+++.+.|.| +.     ++||+++  -.+|+|.+.. 
T Consensus        58 ~~~rla~gS~~Ee~~Nkvqiv~ld~~s~---e~~~~a~fd~~YP~tK~~wiP-d~~g~~pdlLATs~--D~LRlWri~~e  131 (364)
T KOG0290|consen   58 KKFRLAVGSFIEEYNNKVQIVQLDEDSG---ELVEDANFDHPYPVTKLMWIP-DSKGVYPDLLATSS--DFLRLWRIGDE  131 (364)
T ss_pred             cceeEEEeeeccccCCeeEEEEEccCCC---ceeccCCCCCCCCccceEecC-CccccCcchhhccc--CeEEEEeccCc
Confidence            456788887    357788877754332   122333358999999999994 44     3555554  4899999863 


Q ss_pred             -Cccccc--e---eeccccccEEEEEe---CCCeEEEEecCCcEEEEEcCCCCc---cccccccCCCeEEEEEec-cCCE
Q psy8152          75 -KNFNTN--T---DVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYKTEPD---QWTNFNVGPQLECMKHNK-HSNI  141 (444)
Q Consensus        75 -~~~~~~--~---~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~-~~~~  141 (444)
                       .+....  +   +...+..++++|.+   +.++|.+++-|-+..|||+.++..   ...+..|...|..++|.. .-+.
T Consensus       132 e~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~  211 (364)
T KOG0290|consen  132 ESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDV  211 (364)
T ss_pred             CCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccce
Confidence             221111  1   11234667888865   468999999999999999998743   335788999999999998 4568


Q ss_pred             EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCC-ceEEEEEcCCC
Q psy8152         142 IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQ-GYVRVYDPKIT  219 (444)
Q Consensus       142 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d-~~i~i~d~~~~  219 (444)
                      ||+.+.||.+|+||++.......+.....        |       ..+...++|++.. +++|+-..| ..|.|.|+|  
T Consensus       212 FASvgaDGSvRmFDLR~leHSTIIYE~p~--------~-------~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR--  274 (364)
T KOG0290|consen  212 FASVGADGSVRMFDLRSLEHSTIIYEDPS--------P-------STPLLRLSWNKQDPNYMATFAMDSNKVVILDIR--  274 (364)
T ss_pred             EEEecCCCcEEEEEecccccceEEecCCC--------C-------CCcceeeccCcCCchHHhhhhcCCceEEEEEec--
Confidence            99999999999999997442221111111        0       1268889999876 777766554 479999999  


Q ss_pred             CCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCc-----ceeEeccccCceeEEEecCCC-CEEEE
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGK-----PCYKYKGFAGCVKDIACPLNE-NLILS  292 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~h~~~i~~~~~s~~~-~~l~s  292 (444)
                      ....++..+.+|...|+.++|.|. ...|++++.|..+.+||+....+     ++..+. ..+.|+.+.|++.. .+|+.
T Consensus       275 ~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai  353 (364)
T KOG0290|consen  275 VPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAI  353 (364)
T ss_pred             CCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEE
Confidence            677889999999999999999996 67899999999999999987322     233333 45789999999754 56766


Q ss_pred             EECCCcEEE
Q psy8152         293 VSLDRHFRV  301 (444)
Q Consensus       293 ~~~dg~i~v  301 (444)
                      +. ++++.+
T Consensus       354 ~~-~kklei  361 (364)
T KOG0290|consen  354 CF-GKKLEI  361 (364)
T ss_pred             Ee-cCeeeE
Confidence            54 334433

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.88  E-value=8.4e-19  Score=166.11  Aligned_cols=318  Identities=20%  Similarity=0.259  Sum_probs=231.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEee-eccCCc-EEEEEEc-CCeEEEEeCCC-Cccccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNW-GNVEES-ELLIAYS-GQKIKIYDTDF-KNFNTN   80 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~-~l~~~~~-d~~i~vw~~~~-~~~~~~   80 (444)
                      .+..++.++.++.+.+|+........   ..+.. .+...+..+.+ + +++. .++..+. ++.+++|++.. ......
T Consensus        76 ~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  150 (466)
T COG2319          76 DGELLLSGSSDGTIKLWDLDNGEKLI---KSLEG-LHDSSVSKLALSS-PDGNSILLASSSLDGTVKLWDLSTPGKLIRT  150 (466)
T ss_pred             CCcEEEEecCCCcEEEEEcCCCceeE---EEEec-cCCCceeeEEEEC-CCcceEEeccCCCCccEEEEEecCCCeEEEE
Confidence            45667788889999999998775112   22221 12246677766 6 5666 4555444 89999999987 555555


Q ss_pred             eeeccccccEE--EEEeCCCeEEEEec-CCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEc
Q psy8152          81 TDVSFGEGDIV--GVSRYDECILTAVK-SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDL  156 (444)
Q Consensus        81 ~~~~~~~~~v~--~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~  156 (444)
                      +.  .|...+.  +++|++.++++++. ++.+++|++..+..+..+..|...|.+++|+|++. ++++++.|+.|++||.
T Consensus       151 ~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~  228 (466)
T COG2319         151 LE--GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL  228 (466)
T ss_pred             Ee--cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEEC
Confidence            54  5555554  56788888888885 99999999998777776777999999999999887 5555599999999998


Q ss_pred             CCceeee-eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc-ceEEEeCCCCC
Q psy8152         157 NTTKNIF-SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR-PVLKVDIPDVA  234 (444)
Q Consensus       157 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~  234 (444)
                      ..+..+. .+..+..                  .. ...|+|++.++++++.++.+++|+++   ... .+..+..|...
T Consensus       229 ~~~~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~~~~~~~~~~~  286 (466)
T COG2319         229 STGKLLRSTLSGHSD------------------SV-VSSFSPDGSLLASGSSDGTIRLWDLR---SSSSLLRTLSGHSSS  286 (466)
T ss_pred             CCCcEEeeecCCCCc------------------ce-eEeECCCCCEEEEecCCCcEEEeeec---CCCcEEEEEecCCcc
Confidence            8777766 4655555                  22 22799998889999999999999999   333 24444678889


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEE-ECCCcEEEEEcCCCceEE
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSV-SLDRHFRVHDFHSKKLLR  311 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~-~~dg~i~vw~~~~~~~~~  311 (444)
                      +.++.|+|++..+++++.++.+.+|++.. ........  .|...+..+.|.+++..++.+ ..|+.+++|++.......
T Consensus       287 v~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  365 (466)
T COG2319         287 VLSVAFSPDGKLLASGSSDGTVRLWDLET-GKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLK  365 (466)
T ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEEcCC-CceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeE
Confidence            99999999888888888899999999988 66666655  788789999994332455555 688999999999877333


Q ss_pred             EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         312 KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      .......+..+.+.. -.        .....+..++.+.+|+........
T Consensus       366 ~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~  406 (466)
T COG2319         366 TLEGHSNVLSVSFSP-DG--------RVVSSGSTDGTVRLWDLSTGSLLR  406 (466)
T ss_pred             EecCCceEEEEEECC-CC--------CEEEEecCCCceEEEecccCeeee
Confidence            333333366666654 11        112246788999999998765543

>KOG0642|consensus

Probab=99.88  E-value=1.1e-21  Score=173.97  Aligned_cols=251  Identities=12%  Similarity=0.156  Sum_probs=190.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC------CccccceeeccccccEEEE--EeCCCeEEEEecCCcEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF------KNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKL  111 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~------~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~i  111 (444)
                      .|...|++++|. +....|++|+.||+|++|+++.      ......+...+|.++|.|+  .+++..+++|+.||+|+.
T Consensus       292 s~~d~ir~l~~~-~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~  370 (577)
T KOG0642|consen  292 SHDDCIRALAFH-PSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRC  370 (577)
T ss_pred             cchhhhhhhhcC-CCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeee
Confidence            789999999999 7899999999999999999942      2334455567999999887  568999999999999999


Q ss_pred             EEcCCC----------CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         112 WRYKTE----------PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       112 w~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      |++...          .....+.+|...|+.+++++....|++++.||++++|......+ .++.....           
T Consensus       371 w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e-----------  438 (577)
T KOG0642|consen  371 WNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKE-----------  438 (577)
T ss_pred             eccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccc-----------
Confidence            976522          12236788999999999999888999999999999999887665 22322222           


Q ss_pred             ccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeC-------CCCCeeEEEEccCCCEEEEEcCC
Q psy8152         182 FDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-------PDVALSCITTTNQSHYVIVGSTT  253 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d  253 (444)
                           .+...++.+.... .++++...-+.-.++++.   ....+..+..       ....+..+.++|.+.+.+++..+
T Consensus       439 -----~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~e---v~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed  510 (577)
T KOG0642|consen  439 -----HGYPLSVDRTSSRPAHSLASFRFGYTSIDDME---VVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHED  510 (577)
T ss_pred             -----cCCcceEeeccchhHhhhhhcccccccchhhh---hhhheeeccccCCCcccccCccceEEecCCCCeeEecccC
Confidence                 1124455554322 222332233333334433   2222322221       12346788899999999999999


Q ss_pred             CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         254 GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       254 g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      +.|+++|..+ +.+++....|...++++++.|+|.+|++++.|+.+++|.+....++..
T Consensus       511 ~~Ir~~dn~~-~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~e  568 (577)
T KOG0642|consen  511 RSIRFFDNKT-GKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLE  568 (577)
T ss_pred             Cceecccccc-cccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeec
Confidence            9999999999 999999999999999999999999999999999999999977666544

>KOG4227|consensus

Probab=99.87  E-value=8.8e-21  Score=161.14  Aligned_cols=284  Identities=14%  Similarity=0.137  Sum_probs=210.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCcc--ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKC--IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      .++.+|++|+.|..+++|++..--.  ..+.++.. ...|...|.|++|. ....+|++|..+++|.+.|+.+.+.+..+
T Consensus        66 ~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~-~~~H~SNIF~L~F~-~~N~~~~SG~~~~~VI~HDiEt~qsi~V~  143 (609)
T KOG4227|consen   66 HNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVM-EHPHRSNIFSLEFD-LENRFLYSGERWGTVIKHDIETKQSIYVA  143 (609)
T ss_pred             cCCeEEeecCCcceeeeechHHHHhhcCCCCceec-cCccccceEEEEEc-cCCeeEecCCCcceeEeeecccceeeeee
Confidence            3578999999999999999854321  01223322 22677999999999 78889999999999999999999888777


Q ss_pred             eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC-ccc--cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEE
Q psy8152          82 DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP-DQW--TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWD  155 (444)
Q Consensus        82 ~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~-~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd  155 (444)
                      .-....+.|+.+  +|..+.|++.+.++.|.+||.+..+ ...  ...........+.|+| ...+|++.+..+-+.+||
T Consensus       144 ~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D  223 (609)
T KOG4227|consen  144 NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFD  223 (609)
T ss_pred             cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCcee
Confidence            544445678776  6888999999999999999988655 222  1223456678899999 788999999999999999


Q ss_pred             cCCce-eeeeeecccceeeEeeeCCCcccccC-ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--
Q psy8152         156 LNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRR-PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--  231 (444)
Q Consensus       156 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--  231 (444)
                      ++..+ ++.......+             +.. ...-.++.|+|.|+.|++--....-.+||+-  .+..++..+...  
T Consensus       224 ~R~~~~~~~~~~~~~~-------------L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~--S~R~~V~k~D~N~~  288 (609)
T KOG4227|consen  224 RRMQARPVYQRSMFKG-------------LPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFI--SQRCFVLKSDHNPN  288 (609)
T ss_pred             eccccchHHhhhcccc-------------CcccchhhhheeeCCCCCeehhhhccCCCEEeeee--cccceeEeccCCCC
Confidence            98743 2322221111             000 0123567899999888887777777788987  234555555411  


Q ss_pred             ----CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC----------------------CcceeEeccccCceeEEEecC
Q psy8152         232 ----DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK----------------------GKPCYKYKGFAGCVKDIACPL  285 (444)
Q Consensus       232 ----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----------------------~~~~~~~~~h~~~i~~~~~s~  285 (444)
                          ...+.+++|.-+ ..+++|+.+-.|++|.+...                      .+.+..+++|.+.++.+.|+|
T Consensus       289 GY~N~~T~KS~~F~~D-~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~  367 (609)
T KOG4227|consen  289 GYCNIKTIKSMTFIDD-YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQ  367 (609)
T ss_pred             cceeeeeeeeeeeecc-eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecC
Confidence                235677888755 45999999999999988640                      123456789999999999999


Q ss_pred             CCCEEEEEECCCcEEEEEcC
Q psy8152         286 NENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       286 ~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ...+|++.+-.+.++||.-.
T Consensus       368 H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  368 HNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             CcceEeccchhhheeccccc
Confidence            99999999999999999754

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.87  E-value=6.6e-19  Score=166.82  Aligned_cols=286  Identities=19%  Similarity=0.264  Sum_probs=223.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-cccceeeccccccEEE--E-EeCCC-eEEEEec-CCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTDVSFGEGDIVG--V-SRYDE-CILTAVK-SGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~v~~--~-s~~~~-~l~~~~~-dg~i~iw~  113 (444)
                      .|...|.++.|. +.+..++.++.++.+.+|+...+. ....+... +...+..  + .+++. +++..+. ++.+.+|+
T Consensus        63 ~~~~~i~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  140 (466)
T COG2319          63 GHEDSITSIAFS-PDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGL-HDSSVSKLALSSPDGNSILLASSSLDGTVKLWD  140 (466)
T ss_pred             eccceEEEEEEC-CCCcEEEEecCCCcEEEEEcCCCceeEEEEecc-CCCceeeEEEECCCcceEEeccCCCCccEEEEE
Confidence            789999999999 789999999999999999998776 45444421 1113322  2 45666 4555444 89999999


Q ss_pred             cCC-CCccccccccCCCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         114 YKT-EPDQWTNFNVGPQLECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       114 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                      +.. ......+..|...|..++|+|++..+++++. ++.+++|++..+..+..+..|..                  .|.
T Consensus       141 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~  202 (466)
T COG2319         141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD------------------PVS  202 (466)
T ss_pred             ecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCC------------------ceE
Confidence            997 5666668889999999999999988888885 99999999998888888777666                  799


Q ss_pred             EEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceE-EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc-e
Q psy8152         192 GISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVL-KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP-C  268 (444)
Q Consensus       192 ~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~  268 (444)
                      +++|+|++. .+++++.|+.|++||..   ....+. .+..|.... ...|+|++.++++++.++.+++|+++. ... +
T Consensus       203 ~~~~~~~~~~~~~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~  277 (466)
T COG2319         203 SLAFSPDGGLLIASGSSDGTIRLWDLS---TGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRS-SSSLL  277 (466)
T ss_pred             EEEEcCCcceEEEEecCCCcEEEEECC---CCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecC-CCcEE
Confidence            999999987 55566999999999887   566666 577777764 448999998999999999999999997 443 5


Q ss_pred             eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---cCCceeEEEEcCCCcccccchhhhhcccccc
Q psy8152         269 YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---MQSRLTSILVRSDFSLENETKKEEQEHSEEK  345 (444)
Q Consensus       269 ~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~  345 (444)
                      ..+.+|...|.++.|+|++..+++++.|+.+++|++.+........   |...+..+.+ ...       ......++..
T Consensus       278 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~  349 (466)
T COG2319         278 RTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPD-------GSLLVSGGSD  349 (466)
T ss_pred             EEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCC-------CCEEEEeecC
Confidence            5556788999999999988888889999999999998877665543   5556888887 431       0123333356


Q ss_pred             CCCccccCCCccc
Q psy8152         346 GDSDEKYDPEHFE  358 (444)
Q Consensus       346 d~~i~~W~~~~~~  358 (444)
                      |+.+.+|+.....
T Consensus       350 d~~~~~~~~~~~~  362 (466)
T COG2319         350 DGTIRLWDLRTGK  362 (466)
T ss_pred             CCcEEeeecCCCc
Confidence            7889999988655

>KOG1587|consensus

Probab=99.87  E-value=6.7e-20  Score=170.68  Aligned_cols=271  Identities=12%  Similarity=0.052  Sum_probs=196.2

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--ccc--eeeccccccEE
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--NTN--TDVSFGEGDIV   91 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~--~~~~~~~~~v~   91 (444)
                      +.+.+|++.....+..      .+.-...|+|++|+|-+..+|+.|+.+|+|.+||+..+..  ...  .....|..+++
T Consensus       222 ~~~~vW~~~~p~~Pe~------~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~  295 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPEL------VLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVT  295 (555)
T ss_pred             ceEEEEecCCCCCceE------EEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeE
Confidence            4799999987742111      1134789999999988889999999999999999987665  222  23356778887


Q ss_pred             EEEe----CCCeEEEEecCCcEEEEEcCCCCccc------cc------cccCCCeEEEEEec-cCCEEEEeeCCCeEEEE
Q psy8152          92 GVSR----YDECILTAVKSGDVKLWRYKTEPDQW------TN------FNVGPQLECMKHNK-HSNIIATGGKENDLKLW  154 (444)
Q Consensus        92 ~~s~----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~------~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw  154 (444)
                      ++-+    .+.-+++++.||.|+.|+++.-....      ..      ......+++++|.+ +.+.++.|+..|.|..-
T Consensus       296 ~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~  375 (555)
T KOG1587|consen  296 AVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKG  375 (555)
T ss_pred             EEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEE
Confidence            7743    33559999999999999876432211      01      12245689999999 88899999999998774


Q ss_pred             EcCCceeee--eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC
Q psy8152         155 DLNTTKNIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD  232 (444)
Q Consensus       155 d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  232 (444)
                      .-...+...  .++++.            ....+.++|+++.++|-+..++..+.|-+++||...  ....++..+..+.
T Consensus       376 ~r~g~~~~~~~~~~~~~------------~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~--~~~~Pl~~~~~~~  441 (555)
T KOG1587|consen  376 CRKGYTPAPEVSYKGHS------------TFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSED--VIASPLLSLDSSP  441 (555)
T ss_pred             eccCCcccccccccccc------------cccccCcceEeeecCCCccceeeeeccceeEecccc--CCCCcchhhhhcc
Confidence            333211111  111111            112233479999999998444444449999999976  3567777777777


Q ss_pred             CCeeEEEEccC-CCEEEEEcCCCcEEEEEcCC-CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         233 VALSCITTTNQ-SHYVIVGSTTGDMMAVDLRG-KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       233 ~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ..+++++|||. ...++++..+|.|.+||+.. ...++.+...+....+.+.|++.|+.|++|...|++++|++..
T Consensus       442 ~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  442 DYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             ceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            88999999996 45777888999999999976 1355666655566778889999999999999999999999964

>KOG1538|consensus

Probab=99.87  E-value=8.9e-21  Score=171.40  Aligned_cols=280  Identities=13%  Similarity=0.138  Sum_probs=214.1

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      .|..++|- |+|..|+.+.. ..+.+||...|..+.+++  +|...|.++  +.+|+++++|+.|..|.+|+.+-...+ 
T Consensus        14 ci~d~afk-PDGsqL~lAAg-~rlliyD~ndG~llqtLK--gHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-   88 (1081)
T KOG1538|consen   14 CINDIAFK-PDGTQLILAAG-SRLLVYDTSDGTLLQPLK--GHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-   88 (1081)
T ss_pred             chheeEEC-CCCceEEEecC-CEEEEEeCCCcccccccc--cccceEEEEEEccCCceeccCCCceeEEEeccccccee-
Confidence            89999999 79998888776 589999999999999986  778888776  579999999999999999986543333 


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                       ...|...|.|+.|+|-...|++++-. ..-+|...... +...+..                   ..|.+++|..+|++
T Consensus        89 -kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~-V~K~kss-------------------~R~~~CsWtnDGqy  146 (1081)
T KOG1538|consen   89 -KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKS-VSKHKSS-------------------SRIICCSWTNDGQY  146 (1081)
T ss_pred             -eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhh-HHhhhhh-------------------eeEEEeeecCCCcE
Confidence             45699999999999988899998863 46788766432 2222222                   25899999999999


Q ss_pred             EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC-----CEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS-----HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      |+.|-.+|+|.+-+-. ......+..--+.+.+|.+++|+|..     ..+++..-..++.++.+.  |+.+..-+...-
T Consensus       147 lalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls--G~~Igk~r~L~F  223 (1081)
T KOG1538|consen  147 LALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS--GKQIGKDRALNF  223 (1081)
T ss_pred             EEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec--ceeecccccCCC
Confidence            9999999999998765 22222233233567899999999963     467777777778877776  565554333333


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ...|+.+.|+|.+++.|+.|+.+++|-.. |-.+.++. ....|+.++..|.         +..++.|..||++.-+++-
T Consensus       224 dP~CisYf~NGEy~LiGGsdk~L~~fTR~-GvrLGTvg~~D~WIWtV~~~PN---------sQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  224 DPCCISYFTNGEYILLGGSDKQLSLFTRD-GVRLGTVGEQDSWIWTVQAKPN---------SQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             CchhheeccCCcEEEEccCCCceEEEeec-CeEEeeccccceeEEEEEEccC---------CceEEEEEccCeeehhhhH
Confidence            45688999999999999999999999654 55555554 6778999988854         5788889999999999887


Q ss_pred             cccccccc
Q psy8152         356 HFEMNQVT  363 (444)
Q Consensus       356 ~~~~~~~~  363 (444)
                      ......+.
T Consensus       294 fSTVH~ly  301 (1081)
T KOG1538|consen  294 FSTVHGLY  301 (1081)
T ss_pred             HhHhhhhh
Confidence            54443333

>KOG4227|consensus

Probab=99.86  E-value=2.6e-20  Score=158.33  Aligned_cols=286  Identities=11%  Similarity=0.043  Sum_probs=206.6

Q ss_pred             ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC------CccccceeeccccccEEEEEeC--CCeEEEEecCCcE
Q psy8152          38 YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF------KNFNTNTDVSFGEGDIVGVSRY--DECILTAVKSGDV  109 (444)
Q Consensus        38 ~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~------~~~~~~~~~~~~~~~v~~~s~~--~~~l~~~~~dg~i  109 (444)
                      ..+|.+.|.++.|+ .++.+|++|+.|..+++|++..      .+.+.. ..+.|...|.++.++  +.++++|..+++|
T Consensus        52 ~~~H~GCiNAlqFS-~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~-~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V  129 (609)
T KOG4227|consen   52 VREHTGCINALQFS-HNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGV-MEHPHRSNIFSLEFDLENRFLYSGERWGTV  129 (609)
T ss_pred             hhhhccccceeeec-cCCeEEeecCCcceeeeechHHHHhhcCCCCcee-ccCccccceEEEEEccCCeeEecCCCccee
Confidence            34899999999999 7899999999999999999853      233332 234566788888664  6789999999999


Q ss_pred             EEEEcCCCCccccccccC---CCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCccccc
Q psy8152         110 KLWRYKTEPDQWTNFNVG---PQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       110 ~iw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      .+.|+.+.+.+. ...|.   +.|+.+..+|..+.|++.+.++.|.+||++..+ ++..+-....               
T Consensus       130 I~HDiEt~qsi~-V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~---------------  193 (609)
T KOG4227|consen  130 IKHDIETKQSIY-VANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANS---------------  193 (609)
T ss_pred             Eeeecccceeee-eecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCC---------------
Confidence            999999999886 55554   489999999988999999999999999998744 2211111111               


Q ss_pred             CccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCC------CCCeeEEEEccCCCEEEEEcCCCcEEE
Q psy8152         186 RPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------DVALSCITTTNQSHYVIVGSTTGDMMA  258 (444)
Q Consensus       186 ~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~dg~i~i  258 (444)
                       +.....+.|+|-. .+|++.+..+-+-+||++  ....+++...+.      ...-.++.|+|.|+.|++--....-.+
T Consensus       194 -~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R--~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~  270 (609)
T KOG4227|consen  194 -GKNFYTAEFHPETPALILVNSETGGPNVFDRR--MQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLY  270 (609)
T ss_pred             -CccceeeeecCCCceeEEeccccCCCCceeec--cccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEE
Confidence             1247788899977 788899999999999999  344444432221      222356789999999988766666678


Q ss_pred             EEcCCCCcceeEecccc-------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCc-------------------e---
Q psy8152         259 VDLRGKGKPCYKYKGFA-------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKK-------------------L---  309 (444)
Q Consensus       259 wd~~~~~~~~~~~~~h~-------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~-------------------~---  309 (444)
                      ||+.+..-++.++. |.       ..+.+++|.-+ ..+++|+.+-.|++|.+....                   .   
T Consensus       271 ~D~~S~R~~V~k~D-~N~~GY~N~~T~KS~~F~~D-~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~  348 (609)
T KOG4227|consen  271 FDFISQRCFVLKSD-HNPNGYCNIKTIKSMTFIDD-YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEK  348 (609)
T ss_pred             eeeecccceeEecc-CCCCcceeeeeeeeeeeecc-eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecc
Confidence            88876222333333 32       25667788644 459999999999999986411                   1   


Q ss_pred             -EEEe-ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         310 -LRKD-YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       310 -~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                       +..+ .|..-++.+.|++.         ..++++.+..+.++||...
T Consensus       349 ~~~VLrGHRSv~NQVRF~~H---------~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  349 ELTVLRGHRSVPNQVRFSQH---------NNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             eeEEEecccccccceeecCC---------cceEeccchhhheeccccc
Confidence             1112 25566677777654         4678889999999999754

>KOG0322|consensus

Probab=99.86  E-value=1.6e-20  Score=151.42  Aligned_cols=284  Identities=10%  Similarity=0.098  Sum_probs=192.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+.+|++|..-|.|++|.+++.+.     ...-...|...|+.+..-|  +..|.+-+.|+.+.+|++..+..+..-...
T Consensus        24 a~~rL~sg~~~G~V~~w~lqt~r~-----~~~~r~~g~~~it~lq~~p--~d~l~tqgRd~~L~lw~ia~s~~i~i~Si~   96 (323)
T KOG0322|consen   24 ANERLMSGLSVGIVKMWVLQTERD-----LPLIRLFGRLFITNLQSIP--NDSLDTQGRDPLLILWTIAYSAFISIHSIV   96 (323)
T ss_pred             cchhhhcccccceEEEEEeecCcc-----chhhhhhccceeeceeecC--CcchhhcCCCceEEEEEccCcceEEEeeee
Confidence            356799999999999999998874     1122224678899999884  488999999999999999876655443222


Q ss_pred             cccccEEE--EEeCC----CeEEEEecCCc-EEEEEcCCCCccc----cccccCCCeEEEEEec-cC--CEEEEeeCCCe
Q psy8152          85 FGEGDIVG--VSRYD----ECILTAVKSGD-VKLWRYKTEPDQW----TNFNVGPQLECMKHNK-HS--NIIATGGKEND  150 (444)
Q Consensus        85 ~~~~~v~~--~s~~~----~~l~~~~~dg~-i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~-~~--~~l~~~~~d~~  150 (444)
                      ........  +.+.+    ..++.-+.... +++-|......+.    ......+.+.|..+.. .+  -+|+.|-.+|.
T Consensus        97 ~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsgh  176 (323)
T KOG0322|consen   97 VNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGH  176 (323)
T ss_pred             ccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCe
Confidence            21111111  22222    12232222111 2222222211111    1122345677777544 33  35667788999


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-CCccceEEEe
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-TQRRPVLKVD  229 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~  229 (444)
                      +.+||+.++..+..++....-+..        ...+..+|.++.|.+.-..=++|+.+..+..|.+..+ +....-..+.
T Consensus       177 vv~wd~S~~~~~~~~~~~~kv~~~--------~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~  248 (323)
T KOG0322|consen  177 VVIWDLSTGDKIIQLPQSSKVESP--------NASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEIT  248 (323)
T ss_pred             EEEEEccCCceeeccccccccccc--------hhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEE
Confidence            999999998655544432221000        1122347999999876666678888889999998822 1222222233


Q ss_pred             CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      ..+-.|..+..-||++.+|+++-|+.||||..++ .+++..++-|...|++++|+|+..++|+++.|++|.+|++
T Consensus       249 lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrt-l~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  249 LKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRT-LNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             ecCCCccceEEccCCcEEeecccCCcEEEEEecc-CCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            3344588899999999999999999999999999 9999999999999999999999999999999999999986

>KOG1517|consensus

Probab=99.86  E-value=6.4e-20  Score=173.92  Aligned_cols=280  Identities=16%  Similarity=0.185  Sum_probs=198.7

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-cCCcEEEEEEcCCeEEEEeCC-C----Ccccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-VEESELLIAYSGQKIKIYDTD-F----KNFNT   79 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~~~~~d~~i~vw~~~-~----~~~~~   79 (444)
                      ..+++++...-.|++|+.+.++. ...+..-.  .....|+.+.+-. .+..+|++|+.||.|+||+-. .    .+.+.
T Consensus      1076 ~p~i~~ad~r~~i~vwd~e~~~~-l~~F~n~~--~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVT 1152 (1387)
T KOG1517|consen 1076 EPQIAAADDRERIRVWDWEKGRL-LNGFDNGA--FPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVT 1152 (1387)
T ss_pred             CceeEEcCCcceEEEEecccCce-eccccCCC--CCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEE
Confidence            35678888788999999998875 22222111  3457899999863 345688999999999999742 2    12222


Q ss_pred             cee-------eccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEec-cCCEEEEeeCCCe
Q psy8152          80 NTD-------VSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNK-HSNIIATGGKEND  150 (444)
Q Consensus        80 ~~~-------~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~  150 (444)
                      .+.       .....+.++.+.....+|++++.-..|+|||....++.. ...+....|+++.-+. .|++++.|..||.
T Consensus      1153 aw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGs 1232 (1387)
T KOG1517|consen 1153 AWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGS 1232 (1387)
T ss_pred             eeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCc
Confidence            111       011133445554445566666668899999998776664 2233455567766544 6899999999999


Q ss_pred             EEEEEcCCce---eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152         151 LKLWDLNTTK---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       151 i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      |++||.+...   .+...+.|..                ..+|..+.+.+.| ..|++|+.+|.|++||++ ........
T Consensus      1233 vRvyD~R~a~~ds~v~~~R~h~~----------------~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR-~~~~e~~~ 1295 (1387)
T KOG1517|consen 1233 VRVYDRRMAPPDSLVCVYREHND----------------VEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR-MSSKETFL 1295 (1387)
T ss_pred             eEEeecccCCccccceeecccCC----------------cccceeEEeecCCCcceeeeccCCeEEEEecc-cCcccccc
Confidence            9999998733   4555566655                1138999999988 569999999999999999 22333333


Q ss_pred             EEeCCC--C-CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-------cCceeEEEecCCCCEEEEEECC
Q psy8152         227 KVDIPD--V-ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-------AGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       227 ~~~~~~--~-~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-------~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                      ++..|.  + ..+++..++....+|+|+. +.|+||++.  ++.+..++.+       .+.+.|++|+|..-+||+|+.|
T Consensus      1296 ~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~--G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~D 1372 (1387)
T KOG1517|consen 1296 TIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS--GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSAD 1372 (1387)
T ss_pred             eeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC--hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCC
Confidence            333332  2 4899999999999999988 999999987  5656555422       3577999999999999999999


Q ss_pred             CcEEEEEcCCCc
Q psy8152         297 RHFRVHDFHSKK  308 (444)
Q Consensus       297 g~i~vw~~~~~~  308 (444)
                      .+|.||......
T Consensus      1373 s~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1373 STVSIYSCEKPR 1384 (1387)
T ss_pred             ceEEEeecCCcC
Confidence            999999877643

>KOG1009|consensus

Probab=99.86  E-value=3.4e-20  Score=158.26  Aligned_cols=288  Identities=14%  Similarity=0.146  Sum_probs=211.2

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc-------ceeeccccccEEE--EEeCCCeEEEEecCCcEEEE
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT-------NTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLW  112 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~-------~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw  112 (444)
                      ..+|..+.|.+...+.|+||+.|..|++|.+..+..-.       .-.+..|...|..  |+|+|.+|++|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            47899999995444599999999999999886443222       1123456666655  57889999999999999999


Q ss_pred             EcC--------C-----C---CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEee
Q psy8152         113 RYK--------T-----E---PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS  176 (444)
Q Consensus       113 ~~~--------~-----~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  176 (444)
                      -..        +     .   .......+|...|..++|+|+++++++++-|+.+++||+..|+....+..|.+      
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~------  166 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH------  166 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc------
Confidence            866        2     1   11124556899999999999999999999999999999999999999999888      


Q ss_pred             eCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-------------------CC----CC
Q psy8152         177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-------------------IP----DV  233 (444)
Q Consensus       177 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~~----~~  233 (444)
                                  .+..++|.|-++++++-+.|...+.+.+.   ..+.++...                   .|    ..
T Consensus       167 ------------yvqgvawDpl~qyv~s~s~dr~~~~~~~~---~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlks  231 (434)
T KOG1009|consen  167 ------------YVQGVAWDPLNQYVASKSSDRHPEGFSAK---LKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKS  231 (434)
T ss_pred             ------------ccceeecchhhhhhhhhccCcccceeeee---eeeeeeeeeeeEeeecccCCCCcceeeeeecCchhh
Confidence                        79999999999999999888877777765   211111110                   01    12


Q ss_pred             CeeEEEEccCCCEEEEEcC---------CCcEEEEEcCCCCcceeEeccccCceeEEEecC------------------C
Q psy8152         234 ALSCITTTNQSHYVIVGST---------TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL------------------N  286 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~------------------~  286 (444)
                      ....++|+|+|.+|++...         -+..++|+-....+++..+++...++..+.|+|                  .
T Consensus       232 FFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpy  311 (434)
T KOG1009|consen  232 FFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPY  311 (434)
T ss_pred             hhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEecccccccccccccc
Confidence            3456789999999887431         133466665544567777776666666666654                  1


Q ss_pred             CCEEEEEECCCcEEEEEcCCCceEEEee--cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         287 ENLILSVSLDRHFRVHDFHSKKLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       287 ~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      +-.+|.++ ...|+|||..+-.++....  |-..|+.++|+++         +..++..+.||-+.+-.+...++-
T Consensus       312 rlvfaiAt-~~svyvydtq~~~P~~~v~nihy~~iTDiaws~d---------g~~l~vSS~DGyCS~vtfe~~elg  377 (434)
T KOG1009|consen  312 RLVFAIAT-KNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDD---------GSVLLVSSTDGFCSLVTFEPWELG  377 (434)
T ss_pred             ceEEEEee-cceEEEeccccccceEEEeeeeeeeecceeecCC---------CcEEEEeccCCceEEEEEcchhcc
Confidence            22344444 5579999999988877764  8889999999865         567777888988877766655443

>KOG0649|consensus

Probab=99.86  E-value=1.8e-18  Score=138.11  Aligned_cols=276  Identities=10%  Similarity=0.114  Sum_probs=188.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCc----cceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC----
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDK----CIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK----   75 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~----   75 (444)
                      ...++|++|+..|.|.++.+.+--    ........+...+|.++|+.++|.   ..+|++|+. |.|+-|.....    
T Consensus        20 p~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~---d~~Lls~gd-G~V~gw~W~E~~es~   95 (325)
T KOG0649|consen   20 PSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH---DDFLLSGGD-GLVYGWEWNEEEESL   95 (325)
T ss_pred             CcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee---hhheeeccC-ceEEEeeehhhhhhc
Confidence            356789999999999999884321    111112222223899999999999   567777765 99998875321    


Q ss_pred             --ccccceeecccc-----ccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee
Q psy8152          76 --NFNTNTDVSFGE-----GDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG  146 (444)
Q Consensus        76 --~~~~~~~~~~~~-----~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  146 (444)
                        +.+.....+.|.     ..|.++  .|..+-++.++.|+.++-||+++|+....+.+|...|.++.--.....+++|+
T Consensus        96 ~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~  175 (325)
T KOG0649|consen   96 ATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGA  175 (325)
T ss_pred             cchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecC
Confidence              111122222222     223444  57777777788999999999999999999999999999999855566899999


Q ss_pred             CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152         147 KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       147 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      .||++|+||+++++.+..+....+        |+.+......||.+++.+.  .+|++|+ ...+.+|.++   ...++.
T Consensus       176 EDGtvRvWd~kt~k~v~~ie~yk~--------~~~lRp~~g~wigala~~e--dWlvCGg-Gp~lslwhLr---sse~t~  241 (325)
T KOG0649|consen  176 EDGTVRVWDTKTQKHVSMIEPYKN--------PNLLRPDWGKWIGALAVNE--DWLVCGG-GPKLSLWHLR---SSESTC  241 (325)
T ss_pred             CCccEEEEeccccceeEEeccccC--------hhhcCcccCceeEEEeccC--ceEEecC-CCceeEEecc---CCCceE
Confidence            999999999999999888765554        2222222345788887754  6777654 4689999999   444544


Q ss_pred             EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEE
Q psy8152         227 KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVH  302 (444)
Q Consensus       227 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw  302 (444)
                      .|. -..++..+.|.  ...+++++..+.+.-|.+.  +..-...+......++..|+..- ++|-.++....+.|+
T Consensus       242 vfp-ipa~v~~v~F~--~d~vl~~G~g~~v~~~~l~--Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  242 VFP-IPARVHLVDFV--DDCVLIGGEGNHVQSYTLN--GVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL  313 (325)
T ss_pred             EEe-cccceeEeeee--cceEEEeccccceeeeeec--cEEEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence            443 23346777785  4478888888889999876  45555555434445555554332 455556666666665

>KOG1188|consensus

Probab=99.85  E-value=9e-20  Score=152.43  Aligned_cols=271  Identities=14%  Similarity=0.213  Sum_probs=187.8

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccc--cccccC-CCe
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQW--TNFNVG-PQL  130 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~-~~v  130 (444)
                      ..+|++...|.|++||..+++.+..|+.+......+.|..  .+..+.+|+.||+|++||++......  ....++ .+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            5688888899999999999999999975544444455543  45679999999999999998765543  223343 466


Q ss_pred             EEEEEeccCCEEEEeeC----CCeEEEEEcCCcee-eeeee-cccceeeEeeeCCCcccccCccceeEEEEecCC-CEEE
Q psy8152         131 ECMKHNKHSNIIATGGK----ENDLKLWDLNTTKN-IFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVA  203 (444)
Q Consensus       131 ~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~  203 (444)
                      .|++.+-.++++++|+.    +-.|.+||++..+. +..+. .|..                  -|++++|+|.. ++|+
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~D------------------DVT~lrFHP~~pnlLl  182 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHND------------------DVTQLRFHPSDPNLLL  182 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccC------------------cceeEEecCCCCCeEE
Confidence            77777767788888864    66799999998665 44332 3333                  69999999987 8999


Q ss_pred             EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEecccc-------
Q psy8152         204 VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------  275 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------  275 (444)
                      +|+.||.|.+||+.......++...-.+...|.++.|..++ +.|.+-+...+..+|++.. +.+...+....       
T Consensus       183 SGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~-~~~~~~~~~~~~~~~d~r  261 (376)
T KOG1188|consen  183 SGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELED-GSEETWLENPDVSADDLR  261 (376)
T ss_pred             eecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccC-CChhhcccCccchhhhHH
Confidence            99999999999998433344455455677789999998876 4588888999999999998 76555544210       


Q ss_pred             -----CceeEEEecC-CCCEEEEEEC-CCcEEEEEcC---CCceEEEe---e--cCCceeEEEEcCCCcccccchhhhhc
Q psy8152         276 -----GCVKDIACPL-NENLILSVSL-DRHFRVHDFH---SKKLLRKD---Y--MQSRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       276 -----~~i~~~~~s~-~~~~l~s~~~-dg~i~vw~~~---~~~~~~~~---~--~~~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                           ..+... .+| +..+++.++. -+...++-+.   ++..+...   .  |..-|.++.|.         ....++
T Consensus       262 ~~~~~dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~---------~~~~~l  331 (376)
T KOG1188|consen  262 KEDNCDYVINE-HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFD---------VKNDVL  331 (376)
T ss_pred             hhhhhhheeec-ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhh---------ccccee
Confidence                 111111 223 3345555544 5555555443   33332221   1  33335555554         234689


Q ss_pred             cccccCCCccccCCC
Q psy8152         341 HSEEKGDSDEKYDPE  355 (444)
Q Consensus       341 ~s~~~d~~i~~W~~~  355 (444)
                      .||++||.+.+|...
T Consensus       332 ~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  332 YTGGEDGLLQAWKVE  346 (376)
T ss_pred             eccCCCceEEEEecC
Confidence            999999999999853

>KOG0303|consensus

Probab=99.85  E-value=2.7e-19  Score=152.27  Aligned_cols=280  Identities=13%  Similarity=0.150  Sum_probs=191.4

Q ss_pred             CCcccEEEe---cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           4 ADDYNIYIG---SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         4 ~~~~~l~~g---~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      .++.+|++-   +..|.+.+.-+..-......+..+.  +|+++|..++|+|.+...||+||.|.+|.||.+..+.....
T Consensus        42 vNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~--GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~  119 (472)
T KOG0303|consen   42 VNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVC--GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRD  119 (472)
T ss_pred             cCCceEEEEEecCCCcceeecccccccccCCCCCCcc--CccccccccccCccCCceeecCCCCceEEEEECCCcccccC
Confidence            344555443   3444555555533222223333333  99999999999988889999999999999999875543332


Q ss_pred             e-----eeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEE
Q psy8152          81 T-----DVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLK  152 (444)
Q Consensus        81 ~-----~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  152 (444)
                      +     .+.+|...|--+  +|. .+.|++++.|.+|.+|++.+++.+. ...|...|+++.|+.+|.+|++++.|..|+
T Consensus       120 ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali-~l~hpd~i~S~sfn~dGs~l~TtckDKkvR  198 (472)
T KOG0303|consen  120 LTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALI-TLDHPDMVYSMSFNRDGSLLCTTCKDKKVR  198 (472)
T ss_pred             cccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceee-ecCCCCeEEEEEeccCCceeeeecccceeE
Confidence            2     334676666444  553 5679999999999999999999885 455999999999999999999999999999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCccceEEEe
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      |||.++++.+.....|.+                 .....+.|..++.++-+|.   .+..+.+||...-........+.
T Consensus       199 v~dpr~~~~v~e~~~heG-----------------~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD  261 (472)
T KOG0303|consen  199 VIDPRRGTVVSEGVAHEG-----------------AKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELD  261 (472)
T ss_pred             EEcCCCCcEeeecccccC-----------------CCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEec
Confidence            999999999988877765                 2345567888888554442   36789999987211222333344


Q ss_pred             CCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcc-eeEecc--ccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         230 IPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKP-CYKYKG--FAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       230 ~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~-~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      . .+.|.---|.|+.+.|+. |-.|+.||.|.+.+ ..+ ++-+..  ...+=..+.|-|...+  -.+..-..++|.+.
T Consensus       262 t-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~-d~P~~hyln~f~S~epQRG~g~mPKRGl--~Vs~cEI~rfyKl~  337 (472)
T KOG0303|consen  262 T-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITN-EPPFVHYLNTFSSKEPQRGMGFMPKRGL--DVSKCEIARFYKLH  337 (472)
T ss_pred             c-CCceEEeeecCCCCEEEEEecCCcceEEEEecC-CCceeEEecccccCCccccccccccccc--cchHHHHHHHHHhh
Confidence            3 334555567888777665 66799999999987 443 333321  2234456677665332  22333445666665


Q ss_pred             CC
Q psy8152         306 SK  307 (444)
Q Consensus       306 ~~  307 (444)
                      +.
T Consensus       338 ~~  339 (472)
T KOG0303|consen  338 ER  339 (472)
T ss_pred             cc
Confidence            55

>KOG2110|consensus

Probab=99.85  E-value=1.6e-18  Score=146.61  Aligned_cols=238  Identities=11%  Similarity=0.159  Sum_probs=181.9

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC--cEEEEEcCCCCc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG--DVKLWRYKTEPD  119 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~  119 (444)
                      ...+..+.|+ .+...|..|+.+| .++|+......  .+........|...-+...++|..+.+.  .+++++++.+..
T Consensus         5 ~~ti~~~~~N-qd~~~lsvGs~~G-yk~~~~~~~~k--~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~   80 (391)
T KOG2110|consen    5 KPTINFIGFN-QDSTLLSVGSKDG-YKIFSCSPFEK--CFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTT   80 (391)
T ss_pred             Ccceeeeeec-cceeEEEccCCCc-eeEEecCchHH--hhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCce
Confidence            3456777788 7888888898876 46777654332  1111122455666667777877766653  489999887776


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      +. ......+|.++.++.  +.|+++-.+ .|+|||++..+.+.++.....               .+..+.++++++.+
T Consensus        81 IC-e~~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~---------------n~~gl~AlS~n~~n  141 (391)
T KOG2110|consen   81 IC-EIFFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPP---------------NPKGLCALSPNNAN  141 (391)
T ss_pred             EE-EEecCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCC---------------CccceEeeccCCCC
Confidence            64 444577899999964  456665554 499999999999988765522               01235566666666


Q ss_pred             CEEEEE--eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCc-EEEEEcCCCCcceeEeccc--
Q psy8152         200 DKVAVC--SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGD-MMAVDLRGKGKPCYKYKGF--  274 (444)
Q Consensus       200 ~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~h--  274 (444)
                      .+||.-  ...|.|.+||+.   +.+++..+..|.+++.+++|+|+|.+||+++..|+ ||||.+.+ ++.++.|+.-  
T Consensus       142 ~ylAyp~s~t~GdV~l~d~~---nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~-G~kl~eFRRG~~  217 (391)
T KOG2110|consen  142 CYLAYPGSTTSGDVVLFDTI---NLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE-GQKLYEFRRGTY  217 (391)
T ss_pred             ceEEecCCCCCceEEEEEcc---cceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCC-ccEeeeeeCCce
Confidence            688743  347899999999   99999999999999999999999999999999997 69999999 9999999832  


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ...|.+++|+|++++|++.|..++|+||.+..
T Consensus       218 ~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  218 PVSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             eeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            34688999999999999999999999999865

>KOG0322|consensus

Probab=99.84  E-value=4.4e-20  Score=148.94  Aligned_cols=292  Identities=11%  Similarity=0.053  Sum_probs=195.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE-eCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS-RYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s-~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +|.+.|+++.|. . +.+|++|..-|.|++|.+++.+....+.. .+...|+.+. -.+..+.+-+.|+.+.+|++..+.
T Consensus        12 p~~~~v~s~~fq-a-~~rL~sg~~~G~V~~w~lqt~r~~~~~r~-~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~   88 (323)
T KOG0322|consen   12 PHSSSVTSVLFQ-A-NERLMSGLSVGIVKMWVLQTERDLPLIRL-FGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSA   88 (323)
T ss_pred             cccchheehhhc-c-chhhhcccccceEEEEEeecCccchhhhh-hccceeeceeecCCcchhhcCCCceEEEEEccCcc
Confidence            899999999998 3 56699999999999999999988888764 3477787774 234778889999999999998755


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCC-eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKEN-DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .+.   .|.-.++++.|.+-.  +...+... .+-.++-+.....+.......  ..+.+.++. .....+.+++..+..
T Consensus        89 ~i~---i~Si~~nslgFCrfS--l~~~~k~~eqll~yp~rgsde~h~~D~g~~--tqv~i~dd~-~~~Klgsvmc~~~~~  160 (323)
T KOG0322|consen   89 FIS---IHSIVVNSLGFCRFS--LVKKPKNSEQLLEYPSRGSDETHKQDGGDT--TQVQIADDS-ERSKLGSVMCQDKDH  160 (323)
T ss_pred             eEE---Eeeeeccccccccce--eccCCCcchhheecCCcccchhhhhccCcc--ceeEccCch-hccccCceeeeeccc
Confidence            442   344445555554311  11111111 111222111111111000000  000011111 111122466666432


Q ss_pred             -CC--CEEEEEeCCceEEEEEcCCCCCc----------cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC
Q psy8152         198 -NS--DKVAVCSKQGYVRVYDPKITTQR----------RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK  264 (444)
Q Consensus       198 -~~--~~l~~~~~d~~i~i~d~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  264 (444)
                       .+  -+|++|.++|.+.+||+.   ..          +.+.....|..++.++.|.+.-..=++|+.+..+..|++...
T Consensus       161 ~c~s~~lllaGyEsghvv~wd~S---~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s  237 (323)
T KOG0322|consen  161 ACGSTFLLLAGYESGHVVIWDLS---TGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHS  237 (323)
T ss_pred             cccceEEEEEeccCCeEEEEEcc---CCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccc
Confidence             23  356788899999999999   33          223334568899999999887666678888889999998751


Q ss_pred             -Cc-ce-eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhc
Q psy8152         265 -GK-PC-YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       265 -~~-~~-~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                       +. ++ ..+.-..-.|..+.+-||++.+|+++.|++||||..++..++..+. |...|++++|+++         -..+
T Consensus       238 ~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd---------~~lm  308 (323)
T KOG0322|consen  238 TGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPD---------CELM  308 (323)
T ss_pred             cCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCC---------Cchh
Confidence             11 11 1111123457888999999999999999999999999999999875 9999999999966         3689


Q ss_pred             cccccCCCccccCC
Q psy8152         341 HSEEKGDSDEKYDP  354 (444)
Q Consensus       341 ~s~~~d~~i~~W~~  354 (444)
                      +.++.|.+|.+|++
T Consensus       309 AaaskD~rISLWkL  322 (323)
T KOG0322|consen  309 AAASKDARISLWKL  322 (323)
T ss_pred             hhccCCceEEeeec
Confidence            99999999999985

>KOG1517|consensus

Probab=99.84  E-value=6.1e-19  Score=167.36  Aligned_cols=287  Identities=15%  Similarity=0.178  Sum_probs=204.5

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEE----eCCCeEEEEecCCcEEEEEcC-
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVS----RYDECILTAVKSGDVKLWRYK-  115 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s----~~~~~l~~~~~dg~i~iw~~~-  115 (444)
                      ..+-..+.|+ |-...++++...-.|+|||.+.++.+..|..... ...|..+.    -+..++++|+.||.|+||+-- 
T Consensus      1064 ~~~pk~~~~h-pf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~ 1142 (1387)
T KOG1517|consen 1064 NQPPKTLKFH-PFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYA 1142 (1387)
T ss_pred             CCCCceeeec-CCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccc
Confidence            3456677888 6788899888778999999999999888753221 23344442    345689999999999999732 


Q ss_pred             CC----Cccccc-------cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152         116 TE----PDQWTN-------FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       116 ~~----~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      ..    +.+...       .+-.+.-.-+.|..+..+|+++|.-..|+|||....+.+..+.....              
T Consensus      1143 ~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~-------------- 1208 (1387)
T KOG1517|consen 1143 DKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSS-------------- 1208 (1387)
T ss_pred             cccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCC--------------
Confidence            21    222111       11111114457777556666666678999999998777766654433              


Q ss_pred             cCccceeEEEEe-cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC--eeEEEEccCCCE-EEEEcCCCcEEEEE
Q psy8152         185 RRPVWVNGISFL-PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA--LSCITTTNQSHY-VIVGSTTGDMMAVD  260 (444)
Q Consensus       185 ~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~-l~~~~~dg~i~iwd  260 (444)
                         ..|+++.-. +.|+.|++|..||.|++||.+.......+...+.|...  |..+.+.+.|-- |++|+.+|.|++||
T Consensus      1209 ---t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1209 ---TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred             ---ccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEe
Confidence               246666644 34699999999999999999933333466777888777  999999887644 99999999999999


Q ss_pred             cCCCCccee--Eecccc--C-ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-------cCCceeEEEEcCCC
Q psy8152         261 LRGKGKPCY--KYKGFA--G-CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-------MQSRLTSILVRSDF  328 (444)
Q Consensus       261 ~~~~~~~~~--~~~~h~--~-~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-------~~~~i~~~~~~~~~  328 (444)
                      ++. .....  ++..|.  + ..+++..++....+|+|+. +.|+||++...++-...+       ..+.+.|++|++. 
T Consensus      1286 lR~-~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~- 1362 (1387)
T KOG1517|consen 1286 LRM-SSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPH- 1362 (1387)
T ss_pred             ccc-CcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecch-
Confidence            997 32222  222333  3 5899999999999999998 999999997544322212       2356788998866 


Q ss_pred             cccccchhhhhccccccCCCccccCCCcc
Q psy8152         329 SLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                              ..+++.|+.|..|.||....+
T Consensus      1363 --------~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1363 --------RLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred             --------hHhhhhccCCceEEEeecCCc
Confidence                    367888999999999976644

>KOG0644|consensus

Probab=99.84  E-value=7e-21  Score=176.07  Aligned_cols=244  Identities=14%  Similarity=0.210  Sum_probs=191.2

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|..+|+|+.|. ..+.++++|+.|..|+||.+.++.++....  +|.+.+..+  +.++.++++++.|..|++|.+..+
T Consensus       188 gH~naVyca~fD-rtg~~Iitgsdd~lvKiwS~et~~~lAs~r--Ghs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~  264 (1113)
T KOG0644|consen  188 GHRNAVYCAIFD-RTGRYIITGSDDRLVKIWSMETARCLASCR--GHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG  264 (1113)
T ss_pred             hhhhheeeeeec-cccceEeecCccceeeeeeccchhhhccCC--CCccccchhccchhhhhhhhcccCceEEEEecCCC
Confidence            999999999999 799999999999999999999999988764  888888776  456678999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .++..+.+|.+.|++++|+|-.    +.+.||++++||.+-...++. .           .|  ........+.++.|..
T Consensus       265 ~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~-p-----------rp--~~~~~~~~~~s~~~~~  326 (1113)
T KOG0644|consen  265 APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYV-P-----------RP--LKFTEKDLVDSILFEN  326 (1113)
T ss_pred             chHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccC-C-----------CC--CCcccccceeeeeccc
Confidence            9999999999999999999943    778899999999882111111 0           01  0111112477788888


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      .+..+++++.++.-..|.+.   ...      .+...+.-+.++.+ ..+.+++-.+-.+.+|++.+ +.+++.+.+|..
T Consensus       327 ~~~~f~Tgs~d~ea~n~e~~---~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~-g~l~H~l~ghsd  396 (1113)
T KOG0644|consen  327 NGDRFLTGSRDGEARNHEFE---QLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYT-GQLLHNLMGHSD  396 (1113)
T ss_pred             cccccccccCCcccccchhh---Hhh------hhccceEEEeccccccccceeeeeeeEeeeeeccc-chhhhhhccccc
Confidence            88889999999999888876   111      11111111222212 24666677777899999999 999999999999


Q ss_pred             ceeEEEecCCCC-EEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         277 CVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       277 ~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .+..+.++|-+. ...+++.||...|||+..|.+++...
T Consensus       397 ~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~  435 (1113)
T KOG0644|consen  397 EVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF  435 (1113)
T ss_pred             ceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeee
Confidence            999999999664 56689999999999999988877654

>KOG1963|consensus

Probab=99.84  E-value=3.4e-18  Score=159.84  Aligned_cols=320  Identities=12%  Similarity=0.146  Sum_probs=229.1

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCC--cEEEEEEcCCeEEEEeCCCCcccccee--
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEE--SELLIAYSGQKIKIYDTDFKNFNTNTD--   82 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~~~~~d~~i~vw~~~~~~~~~~~~--   82 (444)
                      ...+.+.....|+||...++.+.    ..+.  .|..+++.+.+.|...  .++++++.+|.|++|+...+.+++++.  
T Consensus        28 ~k~l~~~~~~~V~VyS~~Tg~~i----~~l~--~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~  101 (792)
T KOG1963|consen   28 AKFLFLCTGNFVKVYSTATGECI----TSLE--DHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNN  101 (792)
T ss_pred             CcEEEEeeCCEEEEEecchHhhh----hhcc--cccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecC
Confidence            33444455669999999999862    2222  8999999999985333  577899999999999987665444330  


Q ss_pred             --------------------------------------------------------------------------------
Q psy8152          83 --------------------------------------------------------------------------------   82 (444)
Q Consensus        83 --------------------------------------------------------------------------------   82 (444)
                                                                                                      
T Consensus       102 ~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~  181 (792)
T KOG1963|consen  102 LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMC  181 (792)
T ss_pred             CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEee
Confidence                                                                                            


Q ss_pred             ------ec-------------cccc--cEEEEEeCCCeEEEEecCCcEEEEEcCC--CC--ccccccccCCCeEEEEEec
Q psy8152          83 ------VS-------------FGEG--DIVGVSRYDECILTAVKSGDVKLWRYKT--EP--DQWTNFNVGPQLECMKHNK  137 (444)
Q Consensus        83 ------~~-------------~~~~--~v~~~s~~~~~l~~~~~dg~i~iw~~~~--~~--~~~~~~~~~~~v~~~~~~~  137 (444)
                            .+             .|.-  .+.+++|++++++++..+|.|.+|.--.  ..  ....+.-|...|++++|++
T Consensus       182 ~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~  261 (792)
T KOG1963|consen  182 KIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSS  261 (792)
T ss_pred             eEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEec
Confidence                  00             1111  2345689999999999999999997432  11  1113455889999999999


Q ss_pred             cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      +|.+|++|+..+.+.+|.+.++++ .-++....                  +|..+.++|++.+.+....|..|.+....
T Consensus       262 ~G~~LlSGG~E~VLv~Wq~~T~~k-qfLPRLgs------------------~I~~i~vS~ds~~~sl~~~DNqI~li~~~  322 (792)
T KOG1963|consen  262 DGAYLLSGGREGVLVLWQLETGKK-QFLPRLGS------------------PILHIVVSPDSDLYSLVLEDNQIHLIKAS  322 (792)
T ss_pred             CCceEeecccceEEEEEeecCCCc-ccccccCC------------------eeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence            999999999999999999999873 33344444                  79999999999999999999999999875


Q ss_pred             CCCCccceEEEeC--------CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-----------ccCce
Q psy8152         218 ITTQRRPVLKVDI--------PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-----------FAGCV  278 (444)
Q Consensus       218 ~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------h~~~i  278 (444)
                      .......+..+..        ...-.+.++++|..+.++..+..|.|.+||+.+ ...++.+..           +.-.+
T Consensus       323 dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~t-d~~i~~~~v~~~n~~~~~~n~~v~i  401 (792)
T KOG1963|consen  323 DLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYT-DSTIYKLQVCDENYSDGDVNIQVGI  401 (792)
T ss_pred             chhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccc-cceeeeEEEEeecccCCcceeEEee
Confidence            1111111221211        234467789999777888889999999999998 777777651           22357


Q ss_pred             eEEEecCCCCEEEEEE--------CC--CcEEEEEcCCC----ceEEEee--cCCceeEEEEcCCCcccccchhhhhccc
Q psy8152         279 KDIACPLNENLILSVS--------LD--RHFRVHDFHSK----KLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHS  342 (444)
Q Consensus       279 ~~~~~s~~~~~l~s~~--------~d--g~i~vw~~~~~----~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s  342 (444)
                      +.++.+-.|.+++|.-        .|  -.+++|.....    .+..++.  |...+...++.....       ....++
T Consensus       402 tav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~r-------s~~~vt  474 (792)
T KOG1963|consen  402 TAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTR-------SVRCVT  474 (792)
T ss_pred             eeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcc-------cceeEE
Confidence            7788888899998864        23  35788977653    3333443  666666666665533       237899


Q ss_pred             cccCCCccccCCCcccc
Q psy8152         343 EEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       343 ~~~d~~i~~W~~~~~~~  359 (444)
                      ++.||.+++|-+...+.
T Consensus       475 a~~dg~~KiW~~~~~~n  491 (792)
T KOG1963|consen  475 ASVDGDFKIWVFTDDSN  491 (792)
T ss_pred             eccCCeEEEEEEecccc
Confidence            99999999998854443

>KOG1587|consensus

Probab=99.84  E-value=5.2e-19  Score=164.81  Aligned_cols=242  Identities=15%  Similarity=0.181  Sum_probs=180.4

Q ss_pred             CCCCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCC--cEEEEEEcCCeEEEEeCCCCccc
Q psy8152           1 MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEE--SELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         1 ~s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      +++.++++|+.|..+|.|.+||+..+..............|..+|+.+.|. .+.  .-|++++.||.|..|++..-...
T Consensus       250 f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~-~~~~~~~f~s~ssDG~i~~W~~~~l~~P  328 (555)
T KOG1587|consen  250 FCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL-QNEHNTEFFSLSSDGSICSWDTDMLSLP  328 (555)
T ss_pred             eccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe-ccCCCCceEEEecCCcEeeeeccccccc
Confidence            356788999999999999999998887532222223333899999999998 444  44999999999999987643321


Q ss_pred             c------cee------eccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCc--------cccccccCCCeEEEEEec
Q psy8152          79 T------NTD------VSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPD--------QWTNFNVGPQLECMKHNK  137 (444)
Q Consensus        79 ~------~~~------~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~--------~~~~~~~~~~v~~~~~~~  137 (444)
                      .      ...      ...+......|.+ +...+++|+..|.|..-+....+.        +..+..|.++|+++.++|
T Consensus       329 ~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nP  408 (555)
T KOG1587|consen  329 VEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNP  408 (555)
T ss_pred             hhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCC
Confidence            1      110      1112233344433 567799999999998744332221        224556899999999999


Q ss_pred             -cCCEEEEeeCCCeEEEEEcC-CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEE
Q psy8152         138 -HSNIIATGGKENDLKLWDLN-TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVY  214 (444)
Q Consensus       138 -~~~~l~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~  214 (444)
                       ..+.+++++ |.+++||... ...++..+..+..                  .|++++|||.. ..|+++..+|.|.+|
T Consensus       409 F~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~------------------~v~~vaWSptrpavF~~~d~~G~l~iW  469 (555)
T KOG1587|consen  409 FYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPD------------------YVTDVAWSPTRPAVFATVDGDGNLDIW  469 (555)
T ss_pred             Cccceeeeec-cceeEeccccCCCCcchhhhhccc------------------eeeeeEEcCcCceEEEEEcCCCceehh
Confidence             555566665 8999999988 5667766665555                  69999999987 678888999999999


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      |+. .....++.+...+....+.+.|++.|+.|++|...|++++|++..
T Consensus       470 DLl-~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  470 DLL-QDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             hhh-ccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            998 566677777777777788899999999999999999999999964

>KOG2110|consensus

Probab=99.83  E-value=4.5e-17  Score=137.93  Aligned_cols=265  Identities=15%  Similarity=0.134  Sum_probs=194.3

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC--CeEEEEeCCCCccccceeec
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG--QKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d--~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ..|.+|+.+|. ++|.......      ........-.|.-+-|+   ..++|..+.+  ..+++++++.+..++.+.. 
T Consensus        18 ~~lsvGs~~Gy-k~~~~~~~~k------~~~~~~~~~~IvEmLFS---SSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~f-   86 (391)
T KOG2110|consen   18 TLLSVGSKDGY-KIFSCSPFEK------CFSKDTEGVSIVEMLFS---SSLVAIVSIKQPRKLKVVHFKKKTTICEIFF-   86 (391)
T ss_pred             eEEEccCCCce-eEEecCchHH------hhcccCCCeEEEEeecc---cceeEEEecCCCceEEEEEcccCceEEEEec-
Confidence            45667777765 7777655442      11111234566777788   5677766554  4599999988888877643 


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc---cCCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCc
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN---VGPQLECMKHNKHSNIIATGG--KENDLKLWDLNTT  159 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~  159 (444)
                        ...|.++-.+-++|+++-.+ .|+|||+++.+.+.++..   +...+.++.+++.+.+||.-+  ..|.|.+||+.+-
T Consensus        87 --pt~IL~VrmNr~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl  163 (391)
T KOG2110|consen   87 --PTSILAVRMNRKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINL  163 (391)
T ss_pred             --CCceEEEEEccceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccc
Confidence              67889998888888887666 499999999998874433   455566666666777888533  4689999999999


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce-EEEEEcCCCCCccceEEEeCCC--CCee
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY-VRVYDPKITTQRRPVLKVDIPD--VALS  236 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~--~~i~  236 (444)
                      +++..+..|.+                  .+-+++|+++|.+||+++..|+ ||+|.+.   .+..++.|+...  ..|.
T Consensus       164 ~~v~~I~aH~~------------------~lAalafs~~G~llATASeKGTVIRVf~v~---~G~kl~eFRRG~~~~~Iy  222 (391)
T KOG2110|consen  164 QPVNTINAHKG------------------PLAALAFSPDGTLLATASEKGTVIRVFSVP---EGQKLYEFRRGTYPVSIY  222 (391)
T ss_pred             eeeeEEEecCC------------------ceeEEEECCCCCEEEEeccCceEEEEEEcC---CccEeeeeeCCceeeEEE
Confidence            99999999888                  8999999999999999999996 6899999   888888887543  4578


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCC-----C-------------------------------cceeEeccccCce-e
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGK-----G-------------------------------KPCYKYKGFAGCV-K  279 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~-------------------------------~~~~~~~~h~~~i-~  279 (444)
                      +++|+|++++|++.+..++|+||.+...     .                               +...+.+...+.. .
T Consensus       223 SL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~  302 (391)
T KOG2110|consen  223 SLSFSPDSQFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKN  302 (391)
T ss_pred             EEEECCCCCeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccc
Confidence            9999999999999999999999988640     0                               0000011011111 2


Q ss_pred             EEEec--CCCCEEEEEECCCcEEEEEcCC
Q psy8152         280 DIACP--LNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       280 ~~~~s--~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      .+.+.  +..+++..++.||.++.|.+..
T Consensus       303 ~~~l~~~~~~~~v~vas~dG~~y~y~l~~  331 (391)
T KOG2110|consen  303 ICSLSSIQKIPRVLVASYDGHLYSYRLPP  331 (391)
T ss_pred             eEEeeccCCCCEEEEEEcCCeEEEEEcCC
Confidence            22333  4667899999999999998865

>KOG1007|consensus

Probab=99.83  E-value=1.4e-18  Score=142.11  Aligned_cols=273  Identities=13%  Similarity=0.150  Sum_probs=189.0

Q ss_pred             cEEEEEEc----CCeEEEEeCCCCc--cccceeeccccccEEEE--EeC-CCeEEEEecC-------CcEEEEEcCCCC-
Q psy8152          56 SELLIAYS----GQKIKIYDTDFKN--FNTNTDVSFGEGDIVGV--SRY-DECILTAVKS-------GDVKLWRYKTEP-  118 (444)
Q Consensus        56 ~~l~~~~~----d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~~--s~~-~~~l~~~~~d-------g~i~iw~~~~~~-  118 (444)
                      -.|++|..    ++.|.+.++....  +... .+..|.+.|..+  +|. .+.|+++..+       ..+.||.+.... 
T Consensus        27 icFlvgTnslK~dNqVhll~~d~e~s~l~sk-vf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~  105 (370)
T KOG1007|consen   27 ICFLVGTNSLKEDNQVHLLRLDSEGSELLSK-VFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLG  105 (370)
T ss_pred             eEEEEeccccCCcceeEEEEecCccchhhhh-hhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccC
Confidence            34455543    5788887775432  2222 122457777777  454 4556655442       246799976432 


Q ss_pred             --------cccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee-eeeeecccceeeEeeeCCCcccccCcc
Q psy8152         119 --------DQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       119 --------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                              ++..+- .+-+.|.|+.|.|++..+++-. ++.|.+|++..+.. +..+.....             .....
T Consensus       106 ~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s-------------~e~~~  171 (370)
T KOG1007|consen  106 QSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSES-------------AEMRH  171 (370)
T ss_pred             ccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeeccccc-------------ccccc
Confidence                    221122 2455899999999998888876 78999999988665 333322211             01222


Q ss_pred             ceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCC
Q psy8152         189 WVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGK  264 (444)
Q Consensus       189 ~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~  264 (444)
                      ..++-+|+|  +++.+++ ..+++++.||+|   +......+ ..|...+..+.|+|+- .+|++|+.||.|+|||.+..
T Consensus       172 ~ftsg~WspHHdgnqv~t-t~d~tl~~~D~R---T~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t  247 (370)
T KOG1007|consen  172 SFTSGAWSPHHDGNQVAT-TSDSTLQFWDLR---TMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT  247 (370)
T ss_pred             eecccccCCCCccceEEE-eCCCcEEEEEcc---chhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCC
Confidence            477888998  4566665 467899999999   44444444 4677889999999985 46778999999999999987


Q ss_pred             CcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCC------------------------c-----eEEEe-
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSK------------------------K-----LLRKD-  313 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~------------------------~-----~~~~~-  313 (444)
                      ..++..+.+|...|.++.|+|.. ++|++|+.|..|.+|....-                        +     ++.++ 
T Consensus       248 k~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyd  327 (370)
T KOG1007|consen  248 KFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYD  327 (370)
T ss_pred             CccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccccccc
Confidence            88999999999999999999954 78999999999999975321                        1     11222 


Q ss_pred             ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         314 YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       314 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .|...|.+++|+..        ++-..+|-+.||.+.|=.+.
T Consensus       328 ehEDSVY~~aWSsa--------dPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  328 EHEDSVYALAWSSA--------DPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             ccccceEEEeeccC--------CCeeEEEeccCceEEeecCC
Confidence            27788999998754        23467788888888776554

>KOG0771|consensus

Probab=99.83  E-value=1.8e-19  Score=155.02  Aligned_cols=201  Identities=14%  Similarity=0.216  Sum_probs=158.1

Q ss_pred             cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeee
Q psy8152          87 EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK  166 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~  166 (444)
                      ...+.+++++|..|++++.||++|||+..+...+.....|...|.++.|+|++++|++-+.| ..+||+++++.++....
T Consensus       146 ~~k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  146 QQKVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             cceEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            34678888999999999999999999988887777788899999999999999999999999 89999999997666554


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCC-----CEEEEEeCCceEEEEEcCCCCCc---cceEEEeCCCCCeeEE
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-----DKVAVCSKQGYVRVYDPKITTQR---RPVLKVDIPDVALSCI  238 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~i~~~  238 (444)
                      ....                ......+.|+.++     ..++....-+.|+.|++.. ..+   .+..+.......|+++
T Consensus       225 ~~~k----------------~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~-w~~~~~l~~~~~~~~~~siSsl  287 (398)
T KOG0771|consen  225 PFSK----------------DEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISL-WSGSNFLRLRKKIKRFKSISSL  287 (398)
T ss_pred             Cccc----------------chhhhhceecccCCCceEEEEEecCCCCceeEEEeee-eccccccchhhhhhccCcceeE
Confidence            2222                1235566677665     2333344456777777761 111   1222222334569999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +.+++|++++.|+.+|.|.|++..+ .+.++.++ .|...|+.+.|+|+.+++++.+.+..+.|..+.-
T Consensus       288 ~VS~dGkf~AlGT~dGsVai~~~~~-lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  288 AVSDDGKFLALGTMDGSVAIYDAKS-LQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EEcCCCcEEEEeccCCcEEEEEece-eeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            9999999999999999999999998 77776665 7999999999999999999999999999887754

>KOG1240|consensus

Probab=99.83  E-value=1.1e-18  Score=168.07  Aligned_cols=247  Identities=12%  Similarity=0.113  Sum_probs=173.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cccceeeccccccEEE--EEeCCCeEEEEecCCcEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLW  112 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw  112 (444)
                      .|...|..++.+++++.+|++||.||+|++|+...-.     .......+....++.+  +.+.+..+|+++.||.|++.
T Consensus      1046 Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVL 1125 (1431)
T ss_pred             hccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEE
Confidence            7999999999997777999999999999999975321     1122222222444444  46789999999999999999


Q ss_pred             EcCCCCc-------ccccccc-CCC-eEEEEEec-cCC-EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         113 RYKTEPD-------QWTNFNV-GPQ-LECMKHNK-HSN-IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       113 ~~~~~~~-------~~~~~~~-~~~-v~~~~~~~-~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      ++.....       ......+ .+. |..-+|.. ... .|+.+..-+.|..||++....+++++....           
T Consensus      1126 ~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~----------- 1194 (1431)
T KOG1240|consen 1126 RIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR----------- 1194 (1431)
T ss_pred             EccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc-----------
Confidence            9875211       1111111 223 33334444 333 788888899999999998776666554332           


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCC---CEEEE-Ec-CCCc
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQS---HYVIV-GS-TTGD  255 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~---~~l~~-~~-~dg~  255 (444)
                           -+.|++++.+|.+++++.|+..|.+.+||+|   .+.++..+. ++..+|..+..+|-.   ...++ ++ ..+.
T Consensus      1195 -----hG~vTSi~idp~~~WlviGts~G~l~lWDLR---F~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~ne 1266 (1431)
T KOG1240|consen 1195 -----HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLR---FRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNE 1266 (1431)
T ss_pred             -----ccceeEEEecCCceEEEEecCCceEEEEEee---cCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCc
Confidence                 2359999999999999999999999999999   777776654 345788888887742   34444 44 5778


Q ss_pred             EEEEEcCCCCcceeEeccc--------cC-----------ceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         256 MMAVDLRGKGKPCYKYKGF--------AG-----------CVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~~~h--------~~-----------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      |.+|++.+ +..-..+...        ..           ....+.+...+.++++|+.|..|+.||...
T Consensus      1267 vs~wn~~~-g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1267 VSTWNMET-GLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred             eeeeeccc-CcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence            99999998 6555544321        11           112233444457899999999999999865

>KOG1334|consensus

Probab=99.83  E-value=1.1e-19  Score=158.77  Aligned_cols=289  Identities=10%  Similarity=0.106  Sum_probs=216.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCC-CCccccc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNV-EESELLIAYSGQKIKIYDTD-FKNFNTN   80 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~-~~~~~~~   80 (444)
                      ..+..|++|+.|..|.+|++..++..      +... +|...|....|-|. +...+++++.||.|++=.+. ++.+..+
T Consensus       152 ~~Gd~l~SgSDD~~vv~WdW~~~~~~------l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t  225 (559)
T KOG1334|consen  152 QRGDVLASGSDDLQVVVWDWVSGSPK------LSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENT  225 (559)
T ss_pred             ccCceeeccCccceEEeehhhccCcc------cccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecc
Confidence            45678999999999999999888742      2222 89999999999863 34678999999999998764 4555545


Q ss_pred             eeeccccccEEEE--EeCC-CeEEEEecCCcEEEEEcCCCCcccccc---ccCC---CeEEEEEec-cCCEEEEeeCCCe
Q psy8152          81 TDVSFGEGDIVGV--SRYD-ECILTAVKSGDVKLWRYKTEPDQWTNF---NVGP---QLECMKHNK-HSNIIATGGKEND  150 (444)
Q Consensus        81 ~~~~~~~~~v~~~--s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~~~---~v~~~~~~~-~~~~l~~~~~d~~  150 (444)
                      ..+..|.++|..+  -|+. .-|.+++.|+.+.-+|+....+...+.   .+..   ....++.+| +...+++|+.|..
T Consensus       226 ~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf  305 (559)
T KOG1334|consen  226 KRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQF  305 (559)
T ss_pred             eecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhh
Confidence            5556777777655  4544 559999999999999998776543222   2233   567889999 6679999999999


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc--------
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR--------  222 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--------  222 (444)
                      +++||.+.-..-.      .....-.|.|.-+....+..|++++|+.++.-|+++..|-.|++|.-. .+.+        
T Consensus       306 ~RvYD~R~~~~e~------~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~-~~~G~~p~~~s~  378 (559)
T KOG1334|consen  306 ARVYDQRRIDKEE------NNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKS-MGDGSEPDPSSP  378 (559)
T ss_pred             hhhhcccchhhcc------ccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccc-cccCCCCCCCcc
Confidence            9999987622110      011222344554545556679999999888777777888899999544 1122        


Q ss_pred             --cceEE-EeCCCC--CeeEEEE-ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC
Q psy8152         223 --RPVLK-VDIPDV--ALSCITT-TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       223 --~~~~~-~~~~~~--~i~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                        ..+.. +++|..  .|..+-| -|...|+++|+.-|.|.||+-.+ ++.+.-+.+-..-|+||.=+|.-.+||+++-|
T Consensus       379 ~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t-~eii~~MegDr~VVNCLEpHP~~PvLAsSGid  457 (559)
T KOG1334|consen  379 REQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKT-GEIIRFMEGDRHVVNCLEPHPHLPVLASSGID  457 (559)
T ss_pred             hhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecch-hHHHHHhhcccceEeccCCCCCCchhhccCCc
Confidence              22222 567743  4666665 67889999999999999999998 99999888866799999999999999999999


Q ss_pred             CcEEEEEcCC
Q psy8152         297 RHFRVHDFHS  306 (444)
Q Consensus       297 g~i~vw~~~~  306 (444)
                      .-|+||-..+
T Consensus       458 ~DVKIWTP~~  467 (559)
T KOG1334|consen  458 HDVKIWTPLT  467 (559)
T ss_pred             cceeeecCCc
Confidence            9999998754

>KOG1963|consensus

Probab=99.82  E-value=1.8e-17  Score=155.01  Aligned_cols=324  Identities=12%  Similarity=0.136  Sum_probs=223.6

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC--Cccccceeecc
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF--KNFNTNTDVSF   85 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~--~~~~~~~~~~~   85 (444)
                      .+.....+..+.+|....+..  .....-....|...++|.+++ |+++++++|..||.|.+|.-..  +.....-.+|=
T Consensus       173 e~~~i~~~~~~~~~~v~~~~~--~~~~~~~~~~Htf~~t~~~~s-pn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW  249 (792)
T KOG1963|consen  173 EFKGIVHMCKIHIYFVPKHTK--HTSSRDITVHHTFNITCVALS-PNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW  249 (792)
T ss_pred             eEEEEEEeeeEEEEEecccce--eeccchhhhhhcccceeEEec-cccceEEEeccCCcEEEEeccccccccccceEEEe
Confidence            344444555678888776541  111111112688889999999 8999999999999999997543  22222222344


Q ss_pred             ccc--cEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          86 GEG--DIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        86 ~~~--~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      |..  .+.+|+++|.+|++|+..|.+.+|.+.+++.. .+..-.++|..+.++|++.+.+....|+.|.+....+.....
T Consensus       250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kq-fLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~  328 (792)
T KOG1963|consen  250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQ-FLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKS  328 (792)
T ss_pred             cccccceeEEecCCceEeecccceEEEEEeecCCCcc-cccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhh
Confidence            544  44566889999999999999999999999844 355678999999999999999999999999999887655444


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC-----------CC
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-----------PD  232 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------~~  232 (444)
                      ++.+.....      | ....+.+.-.+.++++|.-+.++-.+..|.|.+||+-   +...+..+..           +.
T Consensus       329 tIsgi~~~~------~-~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~---td~~i~~~~v~~~n~~~~~~n~~  398 (792)
T KOG1963|consen  329 TISGIKPPT------P-STKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLY---TDSTIYKLQVCDENYSDGDVNIQ  398 (792)
T ss_pred             hccCccCCC------c-cccccccccceeEEEcCCCCceeecCCCceEEEEecc---ccceeeeEEEEeecccCCcceeE
Confidence            443332200      0 0011223347788899977888889999999999998   4444444321           12


Q ss_pred             CCeeEEEEccCCCEEEEEc--------CC--CcEEEEEcCCCCcceeEec-----cccCceeEEEecC-CCC-EEEEEEC
Q psy8152         233 VALSCITTTNQSHYVIVGS--------TT--GDMMAVDLRGKGKPCYKYK-----GFAGCVKDIACPL-NEN-LILSVSL  295 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~--------~d--g~i~iwd~~~~~~~~~~~~-----~h~~~i~~~~~s~-~~~-~l~s~~~  295 (444)
                      -.+++++.+..|++++|.-        .+  -.+++|-... ...-..+.     .|...+...++.+ ... .+++++.
T Consensus       399 v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~-~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~  477 (792)
T KOG1963|consen  399 VGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNP-NSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASV  477 (792)
T ss_pred             EeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcC-CcceeEEEEEEecCCCceeEEEEEecCcccceeEEecc
Confidence            3467788888899998853        22  2578887655 33333322     5766655555543 333 8999999


Q ss_pred             CCcEEEEEcCCCc----------eEE-EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         296 DRHFRVHDFHSKK----------LLR-KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       296 dg~i~vw~~~~~~----------~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      ||.++||-+...+          +.. ..+|..++++++|+.+         | .+++.+.+++|.+||...
T Consensus       478 dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~d---------G-slla~s~~~~Itiwd~~~  539 (792)
T KOG1963|consen  478 DGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQD---------G-SLLAVSFDDTITIWDYDT  539 (792)
T ss_pred             CCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCC---------C-cEEEEecCCEEEEecCCC
Confidence            9999999984322          111 1247888888888866         2 467788999999999987

>KOG0303|consensus

Probab=99.82  E-value=4.4e-18  Score=145.00  Aligned_cols=242  Identities=13%  Similarity=0.178  Sum_probs=174.5

Q ss_pred             ceEEEeee----ccCCcEEEE---EEcCCeEEEEeC-CCCccccce-eeccccccEEEE--Ee-CCCeEEEEecCCcEEE
Q psy8152          44 SVLALNWG----NVEESELLI---AYSGQKIKIYDT-DFKNFNTNT-DVSFGEGDIVGV--SR-YDECILTAVKSGDVKL  111 (444)
Q Consensus        44 ~v~~~~~~----~~~~~~l~~---~~~d~~i~vw~~-~~~~~~~~~-~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~i  111 (444)
                      .|+.++|.    .-+..+|+.   ++..|-..+.-+ ++|+.-..+ ...+|..+|+.+  +| +...||+|+.|.+|.|
T Consensus        29 rVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~v  108 (472)
T KOG0303|consen   29 RVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMV  108 (472)
T ss_pred             eeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEE
Confidence            45555553    124456554   233334444433 344443322 224889999876  44 5677999999999999


Q ss_pred             EEcCCCCc-------cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc
Q psy8152         112 WRYKTEPD-------QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       112 w~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      |.+..+..       +..+.+|...|--++|+| -.+.|++++.|++|.+|++.+++.+.++. |..             
T Consensus       109 W~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd-------------  174 (472)
T KOG0303|consen  109 WQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPD-------------  174 (472)
T ss_pred             EECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCC-------------
Confidence            99865432       336778999999999999 67899999999999999999999988877 555             


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC-CeeEEEEccCCCEEEEEc---CCCcEEEE
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV-ALSCITTTNQSHYVIVGS---TTGDMMAV  259 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~---~dg~i~iw  259 (444)
                           .|+++.|+.+|.+|++.+.|..|||||.+   ....+..-.+|.+ .-..+.|-.+|.++.+|.   .+..+-+|
T Consensus       175 -----~i~S~sfn~dGs~l~TtckDKkvRv~dpr---~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLw  246 (472)
T KOG0303|consen  175 -----MVYSMSFNRDGSLLCTTCKDKKVRVIDPR---RGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALW  246 (472)
T ss_pred             -----eEEEEEeccCCceeeeecccceeEEEcCC---CCcEeeecccccCCCcceeEEeccCceeeeccccccccceecc
Confidence                 79999999999999999999999999999   7777777666754 334566888888555543   46789999


Q ss_pred             EcCCCCcce--eEeccccCceeEEEecCCCCEEEE-EECCCcEEEEEcCCCc
Q psy8152         260 DLRGKGKPC--YKYKGFAGCVKDIACPLNENLILS-VSLDRHFRVHDFHSKK  308 (444)
Q Consensus       260 d~~~~~~~~--~~~~~h~~~i~~~~~s~~~~~l~s-~~~dg~i~vw~~~~~~  308 (444)
                      |..+..+++  ..+. -.+.|.---|.++...|+. |-.|+.||.|.+.+..
T Consensus       247 dp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  247 DPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             CcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence            987733343  2333 2344554557788776654 5579999999998765

>KOG0642|consensus

Probab=99.82  E-value=2.8e-19  Score=158.92  Aligned_cols=253  Identities=13%  Similarity=0.125  Sum_probs=174.9

Q ss_pred             cccEEEecCCCcEEEEEcCCCcc-ceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-------
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKC-IIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-------   76 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~-~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-------   76 (444)
                      ...|++++.+|.|++|+++.... ....+..+-.+ +|.++|.|+++. +++..+++|+.||+|+.|++....       
T Consensus       306 ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~-~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~d  384 (577)
T KOG0642|consen  306 EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVP-SNGEHCYSGGIDGTIRCWNLPPNQDPDDSYD  384 (577)
T ss_pred             CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEec-CCceEEEeeccCceeeeeccCCCCCcccccC
Confidence            35799999999999999943211 01222333333 999999999999 899999999999999999764211       


Q ss_pred             -cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccC-CEEEEeeCCCe
Q psy8152          77 -FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHS-NIIATGGKEND  150 (444)
Q Consensus        77 -~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~-~~l~~~~~d~~  150 (444)
                       ....-.+.+|...++.+  +.....|++++.||+|++|......+. ++..  -.+.-+++.+-... .+.++...-+.
T Consensus       385 p~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~-~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~  463 (577)
T KOG0642|consen  385 PSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPC-TFGEPKEHGYPLSVDRTSSRPAHSLASFRFGY  463 (577)
T ss_pred             cchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCcc-ccCCccccCCcceEeeccchhHhhhhhccccc
Confidence             01111234777777655  667778999999999999998776662 1222  22234455554322 22222222233


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI  230 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  230 (444)
                      -.++++...+.+..+.....        |.   ......+..+.++|...+.+++..|+.|+++|..   ...+++....
T Consensus       464 ~~~~~~ev~s~~~~~~s~~~--------~~---~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~---~~~~l~s~~a  529 (577)
T KOG0642|consen  464 TSIDDMEVVSDLLIFESSAS--------PG---PRRYPQINKVVSHPTADITFTAHEDRSIRFFDNK---TGKILHSMVA  529 (577)
T ss_pred             ccchhhhhhhheeeccccCC--------Cc---ccccCccceEEecCCCCeeEecccCCceeccccc---ccccchheee
Confidence            33334443333333322111        00   0011247888999999999999999999999999   8999999999


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      |...++++++.|+|-+|++++.|+.+++|.+.. ..++.....|.
T Consensus       530 ~~~svtslai~~ng~~l~s~s~d~sv~l~kld~-k~~~~es~~~r  573 (577)
T KOG0642|consen  530 HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV-KTCVLESTAHR  573 (577)
T ss_pred             ccceecceeecCCCceEEeecCCceeehhhccc-hheeecccccc
Confidence            999999999999999999999999999999987 66666555553

>KOG0649|consensus

Probab=99.81  E-value=1.4e-17  Score=133.00  Aligned_cols=238  Identities=12%  Similarity=0.129  Sum_probs=180.7

Q ss_pred             EEEEEeCCCeEEEEecCCcEEEEEcCCC----------CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152          90 IVGVSRYDECILTAVKSGDVKLWRYKTE----------PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        90 v~~~s~~~~~l~~~~~dg~i~iw~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      ..+++|.+++|++|..+|+|.++.+++-          ..+....+|.++|+.++|+  ..+|++|+. |.|+-|..+..
T Consensus        15 ~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gd-G~V~gw~W~E~   91 (325)
T KOG0649|consen   15 AQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGD-GLVYGWEWNEE   91 (325)
T ss_pred             HHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccC-ceEEEeeehhh
Confidence            3567899999999999999999997631          1222456799999999998  456777764 99999987652


Q ss_pred             e------eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         160 K------NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       160 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      .      .+...+....           .+...--.|++|...|..+-++.++.|+.++.||+.   .++..+++++|..
T Consensus        92 ~es~~~K~lwe~~~P~~-----------~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE---~G~i~r~~rGHtD  157 (325)
T KOG0649|consen   92 EESLATKRLWEVKIPMQ-----------VDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLE---DGRIQREYRGHTD  157 (325)
T ss_pred             hhhccchhhhhhcCccc-----------cCcccCCccceeEeccCCCcEEEecCCeEEEEEEec---CCEEEEEEcCCcc
Confidence            2      1222221111           101111148999999988888888899999999999   8999999999999


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc---------cc-CceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG---------FA-GCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------h~-~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      .|.++.--.....|++|+.||++||||+++ ++.+..+..         |. ..|-+++-  +..+|++|+ ...+.+|+
T Consensus       158 YvH~vv~R~~~~qilsG~EDGtvRvWd~kt-~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwh  233 (325)
T KOG0649|consen  158 YVHSVVGRNANGQILSGAEDGTVRVWDTKT-QKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWH  233 (325)
T ss_pred             eeeeeeecccCcceeecCCCccEEEEeccc-cceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEe
Confidence            999998855556789999999999999999 888887763         21 23555554  455777764 56799999


Q ss_pred             cCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccc
Q psy8152         304 FHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       304 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~  359 (444)
                      ++..++...+..+.++..+.|-.+           .+++++..+.+.-|.+.+.-.
T Consensus       234 Lrsse~t~vfpipa~v~~v~F~~d-----------~vl~~G~g~~v~~~~l~Gvl~  278 (325)
T KOG0649|consen  234 LRSSESTCVFPIPARVHLVDFVDD-----------CVLIGGEGNHVQSYTLNGVLQ  278 (325)
T ss_pred             ccCCCceEEEecccceeEeeeecc-----------eEEEeccccceeeeeeccEEE
Confidence            999999999999999988887644           577788888999998875433

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.81  E-value=4.4e-17  Score=148.47  Aligned_cols=267  Identities=9%  Similarity=0.093  Sum_probs=171.5

Q ss_pred             EEEEcCCeEEEEeCCC-Cc--cccceeeccccccEEEEEeCCCeEEEEe-cCCcEEEEEcCC-CCccc-cccccCCCeEE
Q psy8152          59 LIAYSGQKIKIYDTDF-KN--FNTNTDVSFGEGDIVGVSRYDECILTAV-KSGDVKLWRYKT-EPDQW-TNFNVGPQLEC  132 (444)
Q Consensus        59 ~~~~~d~~i~vw~~~~-~~--~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~dg~i~iw~~~~-~~~~~-~~~~~~~~v~~  132 (444)
                      ++...++.|++|++.+ ++  .+..+.. ........++|++++|++++ .++.|.+|++.. +.... ...........
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~   84 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTH   84 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceE
Confidence            3446689999999964 33  3334332 22344467899999887664 478899999873 33211 11223445678


Q ss_pred             EEEeccCCEEEEeeC-CCeEEEEEcCC-ce---eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-Ee
Q psy8152         133 MKHNKHSNIIATGGK-ENDLKLWDLNT-TK---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CS  206 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~-d~~i~vwd~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~  206 (444)
                      ++|+|++++|++++. ++.|.+|++.. +.   .+..+....                   .+.+++++|+++++++ ..
T Consensus        85 i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~~p~g~~l~v~~~  145 (330)
T PRK11028         85 ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLE-------------------GCHSANIDPDNRTLWVPCL  145 (330)
T ss_pred             EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCC-------------------cccEeEeCCCCCEEEEeeC
Confidence            999999998888764 88999999974 22   222221111                   3677889999988754 45


Q ss_pred             CCceEEEEEcCCCCCcc----ceEEEeCCCCCeeEEEEccCCCEEEEEcC-CCcEEEEEcCCC-C--cceeEeccc----
Q psy8152         207 KQGYVRVYDPKITTQRR----PVLKVDIPDVALSCITTTNQSHYVIVGST-TGDMMAVDLRGK-G--KPCYKYKGF----  274 (444)
Q Consensus       207 ~d~~i~i~d~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~-~--~~~~~~~~h----  274 (444)
                      .++.|.+||+...+...    ....+.. ......++|+|++++++++.. ++.|.+|++... +  +.+..+..+    
T Consensus       146 ~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~  224 (330)
T PRK11028        146 KEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADF  224 (330)
T ss_pred             CCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcC
Confidence            57999999998211111    0111222 234578999999999988766 899999999731 2  233333321    


Q ss_pred             --cCceeEEEecCCCCEEEEEEC-CCcEEEEEcCCCc----eEEEeecCCceeEEEEcCCCcccccchhhhhccccc-cC
Q psy8152         275 --AGCVKDIACPLNENLILSVSL-DRHFRVHDFHSKK----LLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEE-KG  346 (444)
Q Consensus       275 --~~~i~~~~~s~~~~~l~s~~~-dg~i~vw~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~-~d  346 (444)
                        ......+.|+|++++|+++.. ++.|.+|++....    ++..+........+.++         |++++++++. .+
T Consensus       225 ~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~---------~dg~~l~va~~~~  295 (330)
T PRK11028        225 SDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNID---------HSGKYLIAAGQKS  295 (330)
T ss_pred             CCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEEC---------CCCCEEEEEEccC
Confidence              112346889999999988854 7899999996532    22222222334556665         4456666555 48


Q ss_pred             CCccccCCC
Q psy8152         347 DSDEKYDPE  355 (444)
Q Consensus       347 ~~i~~W~~~  355 (444)
                      ++|.+|.+.
T Consensus       296 ~~v~v~~~~  304 (330)
T PRK11028        296 HHISVYEID  304 (330)
T ss_pred             CcEEEEEEc
Confidence            999999775

>KOG1524|consensus

Probab=99.81  E-value=3.5e-18  Score=151.03  Aligned_cols=207  Identities=14%  Similarity=0.156  Sum_probs=166.2

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEE
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLEC  132 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~  132 (444)
                      ...|+.++.||.+.|.+- .++....+.  .|.+.+.+  ++|+|.-|++++.||.|++|.- +|-...++.....+|+|
T Consensus        75 ~d~~~i~s~DGkf~il~k-~~rVE~sv~--AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c  150 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNK-SARVERSIS--AHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRC  150 (737)
T ss_pred             cceEEEEcCCceEEEecc-cchhhhhhh--hhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEE
Confidence            457889999999999874 477766665  66666654  6899999999999999999984 45444456677889999


Q ss_pred             EEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEE
Q psy8152         133 MKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVR  212 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  212 (444)
                      ++|.|+.+.++.+. .+.+.|=.+.....+...+.|.+                  -|.++.|+|..+++++|+.|-..+
T Consensus       151 ~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDG------------------iiL~~~W~~~s~lI~sgGED~kfK  211 (737)
T KOG1524|consen  151 ARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDG------------------LVLSLSWSTQSNIIASGGEDFRFK  211 (737)
T ss_pred             EEECCCCCceEEec-CCeEEEeecccccceeEEeccCc------------------EEEEeecCccccceeecCCceeEE
Confidence            99999666555543 25677777777777888888888                  799999999999999999999999


Q ss_pred             EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      +||-.    ++++++-..|..+|++++|+|+ ..++.++.+ ++|+   ..         ...+.|..++||+||..+++
T Consensus       212 vWD~~----G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R~---~~---------p~~GSifnlsWS~DGTQ~a~  273 (737)
T KOG1524|consen  212 IWDAQ----GANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TARF---SS---------PRVGSIFNLSWSADGTQATC  273 (737)
T ss_pred             eeccc----CcccccCChhccceeeeeeccc-cceeeeeee-eeee---cC---------CCccceEEEEEcCCCceeec
Confidence            99976    8888888899999999999999 566666532 3331   11         24578999999999999999


Q ss_pred             EECCCcEEEE
Q psy8152         293 VSLDRHFRVH  302 (444)
Q Consensus       293 ~~~dg~i~vw  302 (444)
                      |+..|.+.+=
T Consensus       274 gt~~G~v~~A  283 (737)
T KOG1524|consen  274 GTSTGQLIVA  283 (737)
T ss_pred             cccCceEEEe
Confidence            9999987653

>KOG1524|consensus

Probab=99.81  E-value=2.3e-18  Score=152.21  Aligned_cols=248  Identities=11%  Similarity=0.141  Sum_probs=173.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEE---Ee----CCCeEEEEecCCcEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGV---SR----YDECILTAVKSGDVKL  111 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~---s~----~~~~l~~~~~dg~i~i  111 (444)
                      .|...|.|+.|+ .+.. ++.++.|..+.+|.-.+.........+.. -.+...+   +.    ....|+.++.||.+.+
T Consensus        12 r~~e~vc~v~w~-~~ee-i~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~i   89 (737)
T KOG1524|consen   12 RNSEKVCCVDWS-SNEE-IYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVI   89 (737)
T ss_pred             ccceeEEeeccc-ccce-EEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEE
Confidence            467778899998 4444 44455556666665433333332222211 1111111   11    2346888999999999


Q ss_pred             EEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         112 WRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       112 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                      .+- .++.......|.+.|.|-.|+|+|.-|++++.||.|++|.-. |-...++.....                  +|+
T Consensus        90 l~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-GMLRStl~Q~~~------------------~v~  149 (737)
T KOG1524|consen   90 LNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-GMLRSTVVQNEE------------------SIR  149 (737)
T ss_pred             ecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-chHHHHHhhcCc------------------eeE
Confidence            873 455555677899999999999999999999999999999854 332222222222                  699


Q ss_pred             EEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         192 GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       192 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      |++|.|+.+.++.|. .+.+.|=.+.   ....+...+.|.+-|.++.|+|..++|++|+.|-..+|||-.  |.++..-
T Consensus       150 c~~W~p~S~~vl~c~-g~h~~IKpL~---~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~--G~~Lf~S  223 (737)
T KOG1524|consen  150 CARWAPNSNSIVFCQ-GGHISIKPLA---ANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ--GANLFTS  223 (737)
T ss_pred             EEEECCCCCceEEec-CCeEEEeecc---cccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc--CcccccC
Confidence            999999986555543 3467777777   556666789999999999999999999999999999999976  7888888


Q ss_pred             ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         272 KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      ..|..+|++++|+|+ ..++.++. .++|+=.          ...+.|..++|+++
T Consensus       224 ~~~ey~ITSva~npd-~~~~v~S~-nt~R~~~----------p~~GSifnlsWS~D  267 (737)
T KOG1524|consen  224 AAEEYAITSVAFNPE-KDYLLWSY-NTARFSS----------PRVGSIFNLSWSAD  267 (737)
T ss_pred             Chhccceeeeeeccc-cceeeeee-eeeeecC----------CCccceEEEEEcCC
Confidence            899999999999999 55555543 2333111          23455666666644

>KOG1832|consensus

Probab=99.80  E-value=9.3e-20  Score=169.83  Aligned_cols=255  Identities=14%  Similarity=0.114  Sum_probs=174.1

Q ss_pred             eeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe--CCCeEEEEec-C-
Q psy8152          32 NIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR--YDECILTAVK-S-  106 (444)
Q Consensus        32 ~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~-d-  106 (444)
                      .+.....+ .|...-+|++|+ ...+.|+.|+..|.|++|++.+|.......  .|..+++-+-|  +|..+++.+. . 
T Consensus      1090 RFr~w~~frd~~~~fTc~afs-~~~~hL~vG~~~Geik~~nv~sG~~e~s~n--cH~SavT~vePs~dgs~~Ltsss~S~ 1166 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFS-GGTNHLAVGSHAGEIKIFNVSSGSMEESVN--CHQSAVTLVEPSVDGSTQLTSSSSSS 1166 (1516)
T ss_pred             hcccchhhhccccceeeEEee-cCCceEEeeeccceEEEEEccCcccccccc--ccccccccccccCCcceeeeeccccC
Confidence            34444444 788999999999 899999999999999999999999888875  66888888854  6777655443 3 


Q ss_pred             CcEEEEEcCC-CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         107 GDVKLWRYKT-EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       107 g~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      ....+|++.. +....    .-..-.++.|+.....-+.|+......+||+.++.++.++-....              .
T Consensus      1167 PlsaLW~~~s~~~~~H----sf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~--------------~ 1228 (1516)
T KOG1832|consen 1167 PLSALWDASSTGGPRH----SFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTV--------------T 1228 (1516)
T ss_pred             chHHHhccccccCccc----cccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcch--------------h
Confidence            2577999865 22222    123456888887555556666667799999999887766322111              0


Q ss_pred             CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG  265 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  265 (444)
                      ....-+++.|+|+..+++-   ||  .+||++   ....++.|......+. -.|+|.|..++..+     .|||+++ .
T Consensus      1229 ~~y~~n~a~FsP~D~LIln---dG--vLWDvR---~~~aIh~FD~ft~~~~-G~FHP~g~eVIINS-----EIwD~RT-F 1293 (1516)
T KOG1832|consen 1229 SSYSNNLAHFSPCDTLILN---DG--VLWDVR---IPEAIHRFDQFTDYGG-GGFHPSGNEVIINS-----EIWDMRT-F 1293 (1516)
T ss_pred             hhhhccccccCCCcceEee---Cc--eeeeec---cHHHHhhhhhheeccc-ccccCCCceEEeec-----hhhhhHH-H
Confidence            0112467889999887764   33  389999   6677777765543333 35999999998876     5999999 9


Q ss_pred             cceeEeccccCceeEEEecCCCCEEEEEEC------C-----------CcEEEEEcCCCceEEEeecCCceeEEEE
Q psy8152         266 KPCYKYKGFAGCVKDIACPLNENLILSVSL------D-----------RHFRVHDFHSKKLLRKDYMQSRLTSILV  324 (444)
Q Consensus       266 ~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~------d-----------g~i~vw~~~~~~~~~~~~~~~~i~~~~~  324 (444)
                      +.++..+....  +.+.|+..|..++..-.      |           ...|-|+....+.+.++.....+..++-
T Consensus      1294 ~lLh~VP~Ldq--c~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~Dlct 1367 (1516)
T KOG1832|consen 1294 KLLHSVPSLDQ--CAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLDLCT 1367 (1516)
T ss_pred             HHHhcCccccc--eEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccchhhhhc
Confidence            99888775332  56788888876654320      0           1234455555556666555555544443

>KOG1272|consensus

Probab=99.79  E-value=1.4e-19  Score=157.02  Aligned_cols=226  Identities=14%  Similarity=0.201  Sum_probs=193.2

Q ss_pred             EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccc
Q psy8152          91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSH  170 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~  170 (444)
                      ...+.+|++|+.|+..|.|..+|..+++... .+.-...|..+.|..+.+++|++- ...++|||- .|..++.++.+..
T Consensus       135 ~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~-Ei~v~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtElHClk~~~~  211 (545)
T KOG1272|consen  135 LDYTRNGRHLLLGGRKGHLAAFDWVTKKLHF-EINVMETVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTELHCLKRHIR  211 (545)
T ss_pred             eeecCCccEEEecCCccceeeeecccceeee-eeehhhhhhhhhhhcchHHHHhhh-hceEEEecC-CCcEEeehhhcCc
Confidence            3456789999999999999999999988774 555567899999998888888775 478999994 4778888887766


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG  250 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  250 (444)
                                         |..+.|.|..-+|++++..|.++.-|+.   .++.+..+....+.+..|+-+|-+..+-+|
T Consensus       212 -------------------v~rLeFLPyHfLL~~~~~~G~L~Y~DVS---~GklVa~~~t~~G~~~vm~qNP~NaVih~G  269 (545)
T KOG1272|consen  212 -------------------VARLEFLPYHFLLVAASEAGFLKYQDVS---TGKLVASIRTGAGRTDVMKQNPYNAVIHLG  269 (545)
T ss_pred             -------------------hhhhcccchhheeeecccCCceEEEeec---hhhhhHHHHccCCccchhhcCCccceEEEc
Confidence                               9999999998999999999999999999   888888888888899999999998899999


Q ss_pred             cCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcc
Q psy8152         251 STTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL  330 (444)
Q Consensus       251 ~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~  330 (444)
                      ...|+|.+|.... ..++..+..|.++|.+|++.++|+|+||++.|..++|||++....+.+...+.+...++++..   
T Consensus       270 hsnGtVSlWSP~s-kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqk---  345 (545)
T KOG1272|consen  270 HSNGTVSLWSPNS-KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQK---  345 (545)
T ss_pred             CCCceEEecCCCC-cchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccc---
Confidence            9999999999999 999999999999999999999999999999999999999999777666665556666665532   


Q ss_pred             cccchhhhhccccccCCCccccC
Q psy8152         331 ENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       331 ~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                              -++..+....+.||.
T Consensus       346 --------glLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  346 --------GLLALSYGDHVQIWK  360 (545)
T ss_pred             --------cceeeecCCeeeeeh
Confidence                    344456777788884

>KOG4497|consensus

Probab=99.79  E-value=2.6e-17  Score=137.17  Aligned_cols=296  Identities=13%  Similarity=0.084  Sum_probs=203.6

Q ss_pred             EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccc
Q psy8152          47 ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        47 ~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      -++|| |+++++|+++.- .+.|-|..+-+..+.|.+-. ...-..++.+.-+ |.....++.|.+|++...+...++..
T Consensus        13 ~c~fS-p~g~yiAs~~~y-rlviRd~~tlq~~qlf~cld-ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde   89 (447)
T KOG4497|consen   13 FCSFS-PCGNYIASLSRY-RLVIRDSETLQLHQLFLCLD-KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE   89 (447)
T ss_pred             ceeEC-CCCCeeeeeeee-EEEEeccchhhHHHHHHHHH-HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc
Confidence            35789 799999999985 88889998888877775522 2222334455555 44566788999999998887767777


Q ss_pred             cCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc-------------------
Q psy8152         126 VGPQLECMKHNKHSN-IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR-------------------  185 (444)
Q Consensus       126 ~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  185 (444)
                      .+.++.+++|+|+|+ +|.+...+-.|.+|.+.+.+... ++-.+..+..++|+|++....                   
T Consensus        90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W  168 (447)
T KOG4497|consen   90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAW  168 (447)
T ss_pred             CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHH
Confidence            889999999999995 55566678999999999866543 344455667777877753111                   


Q ss_pred             --------CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         186 --------RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       186 --------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                              -....+.+.|+|+|+.||         +||.-   -...+..+. ..-.+..++|+|.+++|++|+.|+.+|
T Consensus       169 ~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~---Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lr  235 (447)
T KOG4497|consen  169 ILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNV---LEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLR  235 (447)
T ss_pred             HHHHhcCCCcccccCceECCCCcEEE---------Eecch---hhheeeeee-eccceeEEEeccccceEEeeccchhhh
Confidence                    011256788888887665         56654   222222222 224588899999999999999999998


Q ss_pred             EEEcCCCCc------------------------------------------------------------ceeEec-----
Q psy8152         258 AVDLRGKGK------------------------------------------------------------PCYKYK-----  272 (444)
Q Consensus       258 iwd~~~~~~------------------------------------------------------------~~~~~~-----  272 (444)
                      |.+--+ .+                                                            .++.++     
T Consensus       236 vlnh~t-Wk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~  314 (447)
T KOG4497|consen  236 VLNHFT-WKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDF  314 (447)
T ss_pred             hhceee-eeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCC
Confidence            865422 00                                                            011111     


Q ss_pred             -cccCceeEEEecCCCCEEEEEECC--CcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152         273 -GFAGCVKDIACPLNENLILSVSLD--RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD  349 (444)
Q Consensus       273 -~h~~~i~~~~~s~~~~~l~s~~~d--g~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i  349 (444)
                       .....+--++|++|..++++-...  ..+.+||++..++...+..+.+|.+..|.|.-         ..++.......+
T Consensus       315 pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~---------prL~vctg~srL  385 (447)
T KOG4497|consen  315 PNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGR---------PRLVVCTGKSRL  385 (447)
T ss_pred             CCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCC---------ceEEEEcCCceE
Confidence             112345668999999999886543  56999999998888888888999999988652         233333334459


Q ss_pred             cccCCCcccccccccccccc
Q psy8152         350 EKYDPEHFEMNQVTRENYAE  369 (444)
Q Consensus       350 ~~W~~~~~~~~~~~~~~~~~  369 (444)
                      .+|........++....+..
T Consensus       386 Y~W~psg~~~V~vP~~GF~i  405 (447)
T KOG4497|consen  386 YFWAPSGPRVVGVPKKGFNI  405 (447)
T ss_pred             EEEcCCCceEEecCCCCcee
Confidence            99998886665554333443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.79  E-value=1.9e-17  Score=155.50  Aligned_cols=234  Identities=10%  Similarity=0.021  Sum_probs=163.4

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIV   91 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~   91 (444)
                      +..|++|+......     +.+.  .|...+.+.+|+ |+++.|+.++.+   ..|++|++.+++........++. ...
T Consensus       183 ~~~i~i~d~dg~~~-----~~lt--~~~~~v~~p~wS-PDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~-~~~  253 (429)
T PRK01742        183 PYEVRVADYDGFNQ-----FIVN--RSSQPLMSPAWS-PDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN-GAP  253 (429)
T ss_pred             eEEEEEECCCCCCc-----eEec--cCCCccccceEc-CCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc-Cce
Confidence            46899999765541     2222  577889999999 799999987654   47999999887643332222333 246


Q ss_pred             EEEeCCCeEEEEe-cCCcEEEE--EcCCCCccccccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCc-eeeeeee
Q psy8152          92 GVSRYDECILTAV-KSGDVKLW--RYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTT-KNIFSAK  166 (444)
Q Consensus        92 ~~s~~~~~l~~~~-~dg~i~iw--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~-~~~~~~~  166 (444)
                      +++|+|+.|+.++ .+|.+.||  ++.++... .+..+...+....|+|+++.|+.++ .++...||++... .....+ 
T Consensus       254 ~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-  331 (429)
T PRK01742        254 AFSPDGSRLAFASSKDGVLNIYVMGANGGTPS-QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-  331 (429)
T ss_pred             eECCCCCEEEEEEecCCcEEEEEEECCCCCeE-eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-
Confidence            7899999888764 67766555  66666554 3556677788999999999777655 5788888877542 111111 


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCE
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHY  246 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  246 (444)
                      .+ .                  . ....|+|++++|+..+.++ +.+||+.   ...... +... .....+.|+|+|++
T Consensus       332 ~~-~------------------~-~~~~~SpDG~~ia~~~~~~-i~~~Dl~---~g~~~~-lt~~-~~~~~~~~sPdG~~  385 (429)
T PRK01742        332 GG-R------------------G-YSAQISADGKTLVMINGDN-VVKQDLT---SGSTEV-LSST-FLDESPSISPNGIM  385 (429)
T ss_pred             cC-C------------------C-CCccCCCCCCEEEEEcCCC-EEEEECC---CCCeEE-ecCC-CCCCCceECCCCCE
Confidence            11 1                  1 3467999999998887765 5569988   333222 2211 12456889999999


Q ss_pred             EEEEcCCCcEEEEEcC--CCCcceeEeccccCceeEEEecCC
Q psy8152         247 VIVGSTTGDMMAVDLR--GKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~--~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      |+.++.++.+.+|.+.  . +..+..+..|.+.+...+|+|-
T Consensus       386 i~~~s~~g~~~~l~~~~~~-G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        386 IIYSSTQGLGKVLQLVSAD-GRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             EEEEEcCCCceEEEEEECC-CCceEEccCCCCCCCCcccCCC
Confidence            9999999988888753  4 7888889888888999999984

>KOG1523|consensus

Probab=99.78  E-value=4.3e-17  Score=135.47  Aligned_cols=230  Identities=11%  Similarity=0.180  Sum_probs=164.8

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeC-CCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDT-DFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~-~~~~~~~~~~   82 (444)
                      ++...++++.....|.||.....+. ......++  .|...|++|.|+ |..+.|++|+.|..-+||.. ..++...++.
T Consensus        20 ~drt~iAv~~~~~evhiy~~~~~~~-w~~~htls--~Hd~~vtgvdWa-p~snrIvtcs~drnayVw~~~~~~~Wkptlv   95 (361)
T KOG1523|consen   20 SDRTQIAVSPNNHEVHIYSMLGADL-WEPAHTLS--EHDKIVTGVDWA-PKSNRIVTCSHDRNAYVWTQPSGGTWKPTLV   95 (361)
T ss_pred             CCCceEEeccCCceEEEEEecCCCC-ceeceehh--hhCcceeEEeec-CCCCceeEccCCCCccccccCCCCeecccee
Confidence            5678899999999999999877763 22233333  799999999999 79999999999999999998 6677776666


Q ss_pred             eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          83 VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        83 ~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      +..+...++++  +|.++.|++|+....|.||-++...--+    +-..+...|+++.|+|++-+|+.|+.|+.++||..
T Consensus        96 LlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa  175 (361)
T KOG1523|consen   96 LLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA  175 (361)
T ss_pred             EEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence            66667777665  7899999999999999999887544322    23446788999999999999999999999999964


Q ss_pred             CCceeeeeeecccceeeEeeeCCCc---ccc-cCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDE---FDL-RRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD  232 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  232 (444)
                      --.. +-.-.....   --+--|-+   ... ...++|..+.|+|.|..|+-.+.|.++.+-|..  .....+..+....
T Consensus       176 yIK~-Vdekpap~p---Wgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~--~p~~~v~~~~~~~  249 (361)
T KOG1523|consen  176 YIKG-VDEKPAPTP---WGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAA--GPSERVQSVATAQ  249 (361)
T ss_pred             eeec-cccCCCCCC---CccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecC--CCchhccchhhcc
Confidence            2100 000000000   00000000   001 335689999999999999999999999999987  2222333333344


Q ss_pred             CCeeEEEEccC
Q psy8152         233 VALSCITTTNQ  243 (444)
Q Consensus       233 ~~i~~~~~~~~  243 (444)
                      -+..++.|-..
T Consensus       250 lP~ls~~~ise  260 (361)
T KOG1523|consen  250 LPLLSVSWISE  260 (361)
T ss_pred             CCceeeEeecC
Confidence            66677777544

>KOG2394|consensus

Probab=99.78  E-value=4.3e-17  Score=144.32  Aligned_cols=279  Identities=13%  Similarity=0.113  Sum_probs=190.8

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc----cccceeeccccccEEEE-----EeCCCeEEEEecCCcEEEEEc
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKN----FNTNTDVSFGEGDIVGV-----SRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~v~~~-----s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      .++...++ ..+++|+..-. ..+++|....+.    .+......+......+|     .+.+--++.|-.-|.|.+.+.
T Consensus       125 ~~~~~~~~-~~gd~lcFnvg-~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp  202 (636)
T KOG2394|consen  125 IVTNTNQS-GKGDRLCFNVG-RELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDP  202 (636)
T ss_pred             ceeecccc-CCCCEEEEecC-CeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecc
Confidence            34455555 55666665443 467888776432    22222222323333444     244556888888999999987


Q ss_pred             CCCCccccccc-----cCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152         115 KTEPDQWTNFN-----VGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       115 ~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      ...+..+ ++.     .+..|+|+.|-| +..+++.+-.+|.+.+||.....      +..                   
T Consensus       203 ~~~~~sk-lfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~------~~t-------------------  256 (636)
T KOG2394|consen  203 INFEVSK-LFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC------GAT-------------------  256 (636)
T ss_pred             hhhHHHH-hhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccc------cCC-------------------
Confidence            6633322 221     357899999999 66777788889999999872100      000                   


Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                       -.+....+++..++..       .|--.  ....++..+......|...+|+|||++||+.+.||.+||||..+ .+++
T Consensus       257 -~p~~~~~k~~~~f~i~-------t~ksk--~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt-~eLl  325 (636)
T KOG2394|consen  257 -APSYQALKDGDQFAIL-------TSKSK--KTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDT-QELL  325 (636)
T ss_pred             -CCcccccCCCCeeEEe-------eeecc--ccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccH-HHHH
Confidence             1111223444444332       22222  13356666666677899999999999999999999999999999 8888


Q ss_pred             eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccc---------------
Q psy8152         269 YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLEN---------------  332 (444)
Q Consensus       269 ~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---------------  332 (444)
                      ..++..-+...|++|||||+||++|+.|-.|.||.+..++++.+-. |+..|+.++|.+.....+               
T Consensus       326 g~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~  405 (636)
T KOG2394|consen  326 GVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDV  405 (636)
T ss_pred             HHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccch
Confidence            8888777889999999999999999999999999999999998854 999999999973110000               


Q ss_pred             -----------cch-------------hhhhccccccCCCccccCCCcccccc
Q psy8152         333 -----------ETK-------------KEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       333 -----------~~~-------------~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                                 ...             ..-++.|++.|..+-|||+....+.+
T Consensus       406 ~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L~~  458 (636)
T KOG2394|consen  406 AHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVLVP  458 (636)
T ss_pred             hcccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEecchhhccc
Confidence                       000             11257789999999999998655544

>KOG1523|consensus

Probab=99.78  E-value=2.2e-17  Score=137.19  Aligned_cols=239  Identities=12%  Similarity=0.181  Sum_probs=175.6

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc-CCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY-KTE  117 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~-~~~  117 (444)
                      ..+|+|.+|+ ++...+|++.....|.||.....+ ....-.+..|...|+++  +|..+.|++++.|..-++|.. ..+
T Consensus        10 ~~pitchAwn-~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen   10 LEPITCHAWN-SDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             cCceeeeeec-CCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            5799999999 799999999999999999987766 33333334666666655  678889999999999999998 433


Q ss_pred             C--ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         118 P--DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       118 ~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +  +...+..+...++++.|+|.++.||+|+....|.||-++....-..-+..+.              .++..|+++.|
T Consensus        89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikk--------------PirStv~sldW  154 (361)
T KOG1523|consen   89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKK--------------PIRSTVTSLDW  154 (361)
T ss_pred             eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCC--------------ccccceeeeec
Confidence            2  3335778999999999999999999999999999998876443221111111              11226999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCC---------------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKI---------------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~---------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      +|++-+|++|+.|+..|+|..-.               ...+..+..+....+.+..+.|+|.|..|+-.+.|..+.+-|
T Consensus       155 hpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~d  234 (361)
T KOG1523|consen  155 HPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVD  234 (361)
T ss_pred             cCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEee
Confidence            99999999999999999987430               011223333445567899999999999999999999999999


Q ss_pred             cCCCCcceeEeccccCceeEEEecCCCCEEEEEECC
Q psy8152         261 LRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       261 ~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                      ...+.+.+..+....-+..++.|-.. +.++.++.|
T Consensus       235 a~~p~~~v~~~~~~~lP~ls~~~ise-~~vv~ag~~  269 (361)
T KOG1523|consen  235 AAGPSERVQSVATAQLPLLSVSWISE-NSVVAAGYD  269 (361)
T ss_pred             cCCCchhccchhhccCCceeeEeecC-CceeecCCC
Confidence            87733344444433367777777533 234444444

>KOG1240|consensus

Probab=99.78  E-value=9.4e-17  Score=155.04  Aligned_cols=279  Identities=14%  Similarity=0.146  Sum_probs=187.6

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc---
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN---   78 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~---   78 (444)
                      +.+..++++|+.||+|++|++..-............. .....+.++.+. +.++.+|+++.||.|++.++......   
T Consensus      1058 ~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~-~~~~~~Av~t~DG~v~~~~id~~~~~~~~ 1136 (1431)
T KOG1240|consen 1058 SEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC-GNGDQFAVSTKDGSVRVLRIDHYNVSKRV 1136 (1431)
T ss_pred             CCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec-cCCCeEEEEcCCCeEEEEEccccccccce
Confidence            4455799999999999999986543211111111111 246788999988 78999999999999999998752111   


Q ss_pred             ----cceeeccccccEEEEE-e---CCC-eEEEEecCCcEEEEEcCCCCcccccc--ccCCCeEEEEEeccCCEEEEeeC
Q psy8152          79 ----TNTDVSFGEGDIVGVS-R---YDE-CILTAVKSGDVKLWRYKTEPDQWTNF--NVGPQLECMKHNKHSNIIATGGK  147 (444)
Q Consensus        79 ----~~~~~~~~~~~v~~~s-~---~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~  147 (444)
                          ..... ...+.++.+. +   ... .|+.+..-+.|..||+......+...  ...+.|++++.+|.++++++|+.
T Consensus      1137 ~~~~ri~n~-~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts 1215 (1431)
T KOG1240|consen 1137 ATQVRIPNL-KKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTS 1215 (1431)
T ss_pred             eeeeecccc-cCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecC
Confidence                11111 1244555552 2   234 68888899999999998877665333  24568999999999999999999


Q ss_pred             CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC---CEEEEE-e-CCceEEEEEcCCCCCc
Q psy8152         148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS---DKVAVC-S-KQGYVRVYDPKITTQR  222 (444)
Q Consensus       148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~-~-~d~~i~i~d~~~~~~~  222 (444)
                      .|.+.+||++-+.++..+.....                 .+|+.+..+|-.   ...+++ + ..+.|.+|++.   .+
T Consensus      1216 ~G~l~lWDLRF~~~i~sw~~P~~-----------------~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~---~g 1275 (1431)
T KOG1240|consen 1216 RGQLVLWDLRFRVPILSWEHPAR-----------------APIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME---TG 1275 (1431)
T ss_pred             CceEEEEEeecCceeecccCccc-----------------CCcceEEeeccCCCCceEEEecccCCCceeeeecc---cC
Confidence            99999999998888876653332                 367878777643   344444 3 57889999998   32


Q ss_pred             cceEEEeCC-------------------CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC------------------
Q psy8152         223 RPVLKVDIP-------------------DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG------------------  265 (444)
Q Consensus       223 ~~~~~~~~~-------------------~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------------------  265 (444)
                      ..-..+-..                   .-......+...+.++++|+.|..|+.||...+.                  
T Consensus      1276 ~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~ 1355 (1431)
T KOG1240|consen 1276 LRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSE 1355 (1431)
T ss_pred             cceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccch
Confidence            222222211                   0111122233345689999999999999975410                  


Q ss_pred             ----------c-------------------ceeEec--------cccCceeEEEecCCC-CEEEEEECCCcEEEEE
Q psy8152         266 ----------K-------------------PCYKYK--------GFAGCVKDIACPLNE-NLILSVSLDRHFRVHD  303 (444)
Q Consensus       266 ----------~-------------------~~~~~~--------~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~  303 (444)
                                +                   ....+.        .|..+|+++++.... .+|++++.||.|+||.
T Consensus      1356 s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1356 SYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             hccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence                      0                   000111        366788888876543 5899999999999994

>KOG1445|consensus

Probab=99.78  E-value=3.3e-18  Score=154.13  Aligned_cols=238  Identities=12%  Similarity=0.174  Sum_probs=171.3

Q ss_pred             EEEeCCCeEEE--EecCCcEEEEEcCCCCccc----cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCce----
Q psy8152          92 GVSRYDECILT--AVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTK----  160 (444)
Q Consensus        92 ~~s~~~~~l~~--~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~----  160 (444)
                      .|+.+..++++  ++.-|.|-||++...-.+.    -.......|+.+.|.| +...||+++.||.|++|.+..+-    
T Consensus       586 Gfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~  665 (1012)
T KOG1445|consen  586 GFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPEN  665 (1012)
T ss_pred             ceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcc
Confidence            44445555544  4567899999987644332    1223567899999999 89999999999999999997632    


Q ss_pred             ---eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         161 ---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       161 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                         +-..+..|..                  .|+++.|+|-. ..|++++.|.+|++||++   ..+....+.+|...|.
T Consensus       666 ~~tPe~~lt~h~e------------------KI~slRfHPLAadvLa~asyd~Ti~lWDl~---~~~~~~~l~gHtdqIf  724 (1012)
T KOG1445|consen  666 EMTPEKILTIHGE------------------KITSLRFHPLAADVLAVASYDSTIELWDLA---NAKLYSRLVGHTDQIF  724 (1012)
T ss_pred             cCCcceeeecccc------------------eEEEEEecchhhhHhhhhhccceeeeeehh---hhhhhheeccCcCcee
Confidence               3344555555                  79999999966 889999999999999999   7777888999999999


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-CceeEEEecCCCCEEEEEECC----CcEEEEEcCCC--ce
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-GCVKDIACPLNENLILSVSLD----RHFRVHDFHSK--KL  309 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-~~i~~~~~s~~~~~l~s~~~d----g~i~vw~~~~~--~~  309 (444)
                      .++|||+|+.+++.+.||+|++|..++..++++.-.+.. ..-..+.|.-+|+++++.+.|    +.|.+|+..+-  ..
T Consensus       725 ~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~p  804 (1012)
T KOG1445|consen  725 GIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRP  804 (1012)
T ss_pred             EEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCc
Confidence            999999999999999999999999988445555544322 233467788899999888766    46889987762  33


Q ss_pred             EEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         310 LRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      +++........-+  -+.|..    ..+.++++|-.|..|.+|.+..
T Consensus       805 l~t~~lDvaps~L--vP~YD~----Ds~~lfltGKGD~~v~~yEv~~  845 (1012)
T KOG1445|consen  805 LYTQVLDVAPSPL--VPHYDY----DSNVLFLTGKGDRFVNMYEVIY  845 (1012)
T ss_pred             ceeeeecccCccc--cccccC----CCceEEEecCCCceEEEEEecC
Confidence            4433211111111  111111    1124667777788888877653

>KOG2394|consensus

Probab=99.78  E-value=1.3e-17  Score=147.50  Aligned_cols=201  Identities=15%  Similarity=0.171  Sum_probs=146.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+-.+++|-..|.|++++......  ..+......-.+..|+|+.|-|.+...++++-.+|.+++|+..       +.+ 
T Consensus       184 ~g~dllIGf~tGqvq~idp~~~~~--sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~-------~~~-  253 (636)
T KOG2394|consen  184 KGLDLLIGFTTGQVQLIDPINFEV--SKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKE-------IVC-  253 (636)
T ss_pred             CCcceEEeeccCceEEecchhhHH--HHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecc-------ccc-
Confidence            346788899999999998766332  1111111112358999999997677788888889999999872       111 


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      +...+.....+++..+.....-+.      .+..++.........|+.++|+|+|++||+.+.||.+|||+..+.+.+..
T Consensus       254 ~~t~p~~~~~k~~~~f~i~t~ksk------~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~  327 (636)
T KOG2394|consen  254 GATAPSYQALKDGDQFAILTSKSK------KTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGV  327 (636)
T ss_pred             cCCCCcccccCCCCeeEEeeeecc------ccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHH
Confidence            112333333345555443322111      11122222333455899999999999999999999999999999888877


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      ++..-+                  ...|++|+|||++|++|++|--|.||.+.   .++.+..=.+|..+|+.|+|.|
T Consensus       328 mkSYFG------------------GLLCvcWSPDGKyIvtGGEDDLVtVwSf~---erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  328 MKSYFG------------------GLLCVCWSPDGKYIVTGGEDDLVTVWSFE---ERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             HHhhcc------------------ceEEEEEcCCccEEEecCCcceEEEEEec---cceEEEeccccccceeeEeecc
Confidence            776655                  69999999999999999999999999999   8889988899999999999987

>KOG0771|consensus

Probab=99.78  E-value=9.8e-17  Score=138.28  Aligned_cols=194  Identities=14%  Similarity=0.142  Sum_probs=149.6

Q ss_pred             EEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce
Q psy8152         131 ECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY  210 (444)
Q Consensus       131 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  210 (444)
                      .+++|+++|..|++|+.||++|+|+......+.....|..                  .|.++.|+|+|++|++.+.| .
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~------------------eV~DL~FS~dgk~lasig~d-~  208 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHA------------------EVKDLDFSPDGKFLASIGAD-S  208 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcC------------------ccccceeCCCCcEEEEecCC-c
Confidence            7899999999999999999999999877777766666666                  69999999999999999999 9


Q ss_pred             EEEEEcCCCCCccceEEEe--CCCCCeeEEEEccCC-----CEEEEEcCCCcEEEEEcCCCCc----ceeEeccccCcee
Q psy8152         211 VRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQS-----HYVIVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVK  279 (444)
Q Consensus       211 i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~-----~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~  279 (444)
                      .+||+.+   .+.++....  .....+..+.|+.++     ..++....-+.|+.|++.....    +..+...-...|+
T Consensus       209 ~~VW~~~---~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siS  285 (398)
T KOG0771|consen  209 ARVWSVN---TGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSIS  285 (398)
T ss_pred             eEEEEec---cCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcce
Confidence            9999999   555554443  233456678888776     3333345556677777654111    1222222335799


Q ss_pred             EEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee--cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         280 DIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY--MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       280 ~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      +++.+++|++++.|+.+|.|.|++..+.+.++.+.  |..-|+.+.|+|+         .+++++.+.+.+..|-.+.
T Consensus       286 sl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pd---------sr~~~svSs~~~~~v~~l~  354 (398)
T KOG0771|consen  286 SLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPD---------SRYLASVSSDNEAAVTKLA  354 (398)
T ss_pred             eEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCC---------cCcccccccCCceeEEEEe
Confidence            99999999999999999999999999988877765  8889999999965         4677777888777776654

>KOG2111|consensus

Probab=99.77  E-value=6.5e-16  Score=128.46  Aligned_cols=241  Identities=17%  Similarity=0.197  Sum_probs=168.0

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEE-EEecC------CcEEEEEcCC
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECIL-TAVKS------GDVKLWRYKT  116 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~-~~~~d------g~i~iw~~~~  116 (444)
                      ....++|+ .+...+++|..+ -.+||+..--+.....+.......+..+-.-.++|+ +|+..      ..|.|||=..
T Consensus         7 ~~lsvs~N-QD~ScFava~~~-Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k   84 (346)
T KOG2111|consen    7 KTLSVSFN-QDHSCFAVATDT-GFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLK   84 (346)
T ss_pred             ceeEEEEc-cCCceEEEEecC-ceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEeccc
Confidence            34559999 788888888765 589999865333222221111122222223344443 34433      4799999655


Q ss_pred             CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC-CceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN-TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      .+++ .......+|.++.+.++  .|++.- .+.|.||... +.+.++.+....+                +....+++-
T Consensus        85 ~~~i-~el~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~N----------------PkGlC~~~~  144 (346)
T KOG2111|consen   85 ERCI-IELSFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSN----------------PKGLCSLCP  144 (346)
T ss_pred             CcEE-EEEEeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccC----------------CCceEeecC
Confidence            6666 46677889999999764  455554 5789999998 4555555544433                112333333


Q ss_pred             ecCCCEEEE-EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCc-EEEEEcCCCCcceeEecc
Q psy8152         196 LPNSDKVAV-CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGD-MMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       196 ~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~  273 (444)
                      +....+||. |-.-|.|+|-|+. .....+...+..|...|.|++++.+|..||+++..|+ |||||..+ +.++..++.
T Consensus       145 ~~~k~~LafPg~k~GqvQi~dL~-~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~-g~~l~E~RR  222 (346)
T KOG2111|consen  145 TSNKSLLAFPGFKTGQVQIVDLA-STKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTED-GTLLQELRR  222 (346)
T ss_pred             CCCceEEEcCCCccceEEEEEhh-hcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCC-CcEeeeeec
Confidence            333344443 3457899999998 2222245678899999999999999999999999997 79999999 999999983


Q ss_pred             --ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         274 --FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       274 --h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                        ....|.+++|||+..+||++|..|+|+||.+....
T Consensus       223 G~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  223 GVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             CCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence              34679999999999999999999999999987633

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.77  E-value=7.3e-17  Score=151.53  Aligned_cols=231  Identities=10%  Similarity=0.023  Sum_probs=153.9

Q ss_pred             CCeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEecC---CcEEEEEcCCCCccccccccCCCeEEEEEecc
Q psy8152          64 GQKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVKS---GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH  138 (444)
Q Consensus        64 d~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  138 (444)
                      +..|++||..... ...+.  .+...+  ..++|+|+.|+.++.+   ..|++|++.+++... +.........++|+|+
T Consensus       183 ~~~i~i~d~dg~~-~~~lt--~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~~g~~~~~~wSPD  258 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVN--RSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-VASFRGHNGAPAFSPD  258 (429)
T ss_pred             eEEEEEECCCCCC-ceEec--cCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-EecCCCccCceeECCC
Confidence            4689999987554 33332  334444  5678999999887654   469999998876432 2222334457899999


Q ss_pred             CCEEEEee-CCCeEEEE--EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEE
Q psy8152         139 SNIIATGG-KENDLKLW--DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVY  214 (444)
Q Consensus       139 ~~~l~~~~-~d~~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~  214 (444)
                      |+.|+.++ .+|.+.||  |+.++.. ..+..+..                  .+....|+|+|+.|+.++ .++...||
T Consensus       259 G~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~------------------~~~~~~wSpDG~~i~f~s~~~g~~~I~  319 (429)
T PRK01742        259 GSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAG------------------NNTEPSWSPDGQSILFTSDRSGSPQVY  319 (429)
T ss_pred             CCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCC------------------CcCCEEECCCCCEEEEEECCCCCceEE
Confidence            99888765 57766555  5555543 33333333                  477899999998776554 57888888


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      ++.. ... ....+ .+..  ....|+|+|++|+..+.++ +.+||+.+ ++.......+  ....+.|+|+|++|+.++
T Consensus       320 ~~~~-~~~-~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~-g~~~~lt~~~--~~~~~~~sPdG~~i~~~s  390 (429)
T PRK01742        320 RMSA-SGG-GASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTS-GSTEVLSSTF--LDESPSISPNGIMIIYSS  390 (429)
T ss_pred             EEEC-CCC-CeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCC-CCeEEecCCC--CCCCceECCCCCEEEEEE
Confidence            8761 112 22222 3332  4578999999998887755 66699988 6654322222  235678999999999999


Q ss_pred             CCCcEEEEEcC--CCceEEEee-cCCceeEEEEcC
Q psy8152         295 LDRHFRVHDFH--SKKLLRKDY-MQSRLTSILVRS  326 (444)
Q Consensus       295 ~dg~i~vw~~~--~~~~~~~~~-~~~~i~~~~~~~  326 (444)
                      .++.+.+|.+.  +++.+.++. +.+.+...+|++
T Consensus       391 ~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp  425 (429)
T PRK01742        391 TQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSP  425 (429)
T ss_pred             cCCCceEEEEEECCCCceEEccCCCCCCCCcccCC
Confidence            99988888763  466666665 555566666654

>KOG4497|consensus

Probab=99.76  E-value=3e-16  Score=130.93  Aligned_cols=312  Identities=10%  Similarity=0.052  Sum_probs=201.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      .++++|++.+.- .+.|-|..+-+       ..+.+..-..|.-+.|. .+..+++ ....++.|.+|++...+....+.
T Consensus        18 p~g~yiAs~~~y-rlviRd~~tlq-------~~qlf~cldki~yieW~-ads~~ilC~~yk~~~vqvwsl~Qpew~ckId   88 (447)
T KOG4497|consen   18 PCGNYIASLSRY-RLVIRDSETLQ-------LHQLFLCLDKIVYIEWK-ADSCHILCVAYKDPKVQVWSLVQPEWYCKID   88 (447)
T ss_pred             CCCCeeeeeeee-EEEEeccchhh-------HHHHHHHHHHhhheeee-ccceeeeeeeeccceEEEEEeecceeEEEec
Confidence            466788887766 66666655444       22222334678889999 6666655 46678899999999888887776


Q ss_pred             eccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---
Q psy8152          83 VSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---  158 (444)
Q Consensus        83 ~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---  158 (444)
                      .........+++|+|+. |.+...+-.|.+|.+.+.+... +......+..++|+|+|++.+.++.-.....+.+..   
T Consensus        89 eg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~  167 (447)
T KOG4497|consen   89 EGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKA  167 (447)
T ss_pred             cCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHH
Confidence            43223334566899965 5556678899999999887763 333355678999999999998887642222222211   


Q ss_pred             ceeeeeeecccceeeEeeeCCCcc---------c-----ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC------
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEF---------D-----LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI------  218 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------  218 (444)
                      -..+..++.......-+..+|++.         +     ......+..++|+|.+++|++|+.|+.+|+.+--+      
T Consensus       168 W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~e  247 (447)
T KOG4497|consen  168 WILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGE  247 (447)
T ss_pred             HHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhh
Confidence            111112222122222233344431         0     11123488899999999999999999998854320      


Q ss_pred             --------CCC-------------------------------------------ccceEEEe------CCCCCeeEEEEc
Q psy8152         219 --------TTQ-------------------------------------------RRPVLKVD------IPDVALSCITTT  241 (444)
Q Consensus       219 --------~~~-------------------------------------------~~~~~~~~------~~~~~i~~~~~~  241 (444)
                              ...                                           ...+..++      .....+..++|+
T Consensus       248 flhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs  327 (447)
T KOG4497|consen  248 FLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFS  327 (447)
T ss_pred             hccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeec
Confidence                    000                                           00000011      112346678999


Q ss_pred             cCCCEEEEEc--CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152         242 NQSHYVIVGS--TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       242 ~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i  319 (444)
                      +|..|+++-.  .-+.+-+||++. .+....+. ...+|....|.|....|+.+.....+++|.......+..-...-.|
T Consensus       328 ~Ds~y~aTrnd~~PnalW~Wdlq~-l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i  405 (447)
T KOG4497|consen  328 CDSTYAATRNDKYPNALWLWDLQN-LKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNI  405 (447)
T ss_pred             CCceEEeeecCCCCceEEEEechh-hhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCcee
Confidence            9999988853  345799999998 55554444 5678999999999988888888888999998875555544445567


Q ss_pred             eEEEEcCC
Q psy8152         320 TSILVRSD  327 (444)
Q Consensus       320 ~~~~~~~~  327 (444)
                      ..+.|...
T Consensus       406 ~~l~W~~~  413 (447)
T KOG4497|consen  406 QKLQWLQP  413 (447)
T ss_pred             eeEEecCC
Confidence            78887654

>KOG1272|consensus

Probab=99.75  E-value=3e-18  Score=148.98  Aligned_cols=253  Identities=12%  Similarity=0.143  Sum_probs=198.2

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      ...+.+.++ .+|.+|+.|+.-|.|-.+|..++++...+..   ...|..+.  .+.+++|++ ....++|||-. |..+
T Consensus       130 FGPY~~~yt-rnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v---~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~-GtEl  203 (545)
T KOG1272|consen  130 FGPYHLDYT-RNGRHLLLGGRKGHLAAFDWVTKKLHFEINV---METVRDVTFLHNEQFFAVA-QKKYVYVYDNN-GTEL  203 (545)
T ss_pred             cCCeeeeec-CCccEEEecCCccceeeeecccceeeeeeeh---hhhhhhhhhhcchHHHHhh-hhceEEEecCC-CcEE
Confidence            345778888 7999999999999999999999998887754   34444443  355666665 56689999965 4434


Q ss_pred             ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         121 WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       121 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      . .......|..+.|.|..-+|++++..|.++.-|+.+|+.+..+....+                  .+..|+-+|-.-
T Consensus       204 H-Clk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G------------------~~~vm~qNP~Na  264 (545)
T KOG1272|consen  204 H-CLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAG------------------RTDVMKQNPYNA  264 (545)
T ss_pred             e-ehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCC------------------ccchhhcCCccc
Confidence            3 333445799999999989999999999999999999999988877666                  688888899888


Q ss_pred             EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD  280 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~  280 (444)
                      .+-+|...|+|.+|...   ...++..+..|.++|.+|++.++|+|++|.+.|..++|||++. ...++++.. ..+...
T Consensus       265 Vih~GhsnGtVSlWSP~---skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~-~~ql~t~~t-p~~a~~  339 (545)
T KOG1272|consen  265 VIHLGHSNGTVSLWSPN---SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN-FYQLHTYRT-PHPASN  339 (545)
T ss_pred             eEEEcCCCceEEecCCC---CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecc-ccccceeec-CCCccc
Confidence            89999999999999998   8889988999999999999999999999999999999999999 777766654 446677


Q ss_pred             EEecCCCCEEEEEECCCcEEEEEc-CCCc-eEEEe----ecCCceeEEEEcCC
Q psy8152         281 IACPLNENLILSVSLDRHFRVHDF-HSKK-LLRKD----YMQSRLTSILVRSD  327 (444)
Q Consensus       281 ~~~s~~~~~l~s~~~dg~i~vw~~-~~~~-~~~~~----~~~~~i~~~~~~~~  327 (444)
                      ++||..|  +++.+....|.||.= ..+. .....    ...++|..+.|+|-
T Consensus       340 ls~Sqkg--lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~  390 (545)
T KOG1272|consen  340 LSLSQKG--LLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPY  390 (545)
T ss_pred             ccccccc--ceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccH
Confidence            8888655  444456667999942 2211 11111    24567888888764

>KOG2321|consensus

Probab=99.75  E-value=3.5e-16  Score=139.71  Aligned_cols=265  Identities=17%  Similarity=0.176  Sum_probs=186.9

Q ss_pred             eeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEE---EeCCCeEEEEecCCc
Q psy8152          33 IQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV---SRYDECILTAVKSGD  108 (444)
Q Consensus        33 ~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~---s~~~~~l~~~~~dg~  108 (444)
                      +..++.+.|...-+.|..+ |+|.|++ +|..-..|++||+....+...-.  - ...++.|   +-+-..++.-..|.+
T Consensus        42 ieLiQdfe~p~ast~ik~s-~DGqY~lAtG~YKP~ikvydlanLSLKFERh--l-Dae~V~feiLsDD~SK~v~L~~DR~  117 (703)
T KOG2321|consen   42 IELIQDFEMPTASTRIKVS-PDGQYLLATGTYKPQIKVYDLANLSLKFERH--L-DAEVVDFEILSDDYSKSVFLQNDRT  117 (703)
T ss_pred             HHHHHhcCCccccceeEec-CCCcEEEEecccCCceEEEEcccceeeeeec--c-cccceeEEEeccchhhheEeecCce
Confidence            3445667899999999999 7888865 57778999999997554433321  1 3334444   334444555566777


Q ss_pred             EEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152         109 VKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       109 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      |-+..- .|...  ...-+..-..++++.-..-|++++....|+-+++..|..+..+.....                  
T Consensus       118 IefHak-~G~hy--~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~------------------  176 (703)
T KOG2321|consen  118 IEFHAK-YGRHY--RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSG------------------  176 (703)
T ss_pred             eeehhh-cCeee--eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccc------------------
Confidence            765432 12211  111223345667766333455555556799999999998887776655                  


Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe------CCC-----CCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD------IPD-----VALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                      .++++..++-..+|++|+.+|.|..||.+   ....+.++.      .|.     ..|+++.|+.+|-.+++|+..|.+.
T Consensus       177 ~lN~v~in~~hgLla~Gt~~g~VEfwDpR---~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~  253 (703)
T KOG2321|consen  177 ELNVVSINEEHGLLACGTEDGVVEFWDPR---DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVL  253 (703)
T ss_pred             cceeeeecCccceEEecccCceEEEecch---hhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEE
Confidence            69999999999999999999999999999   444333332      222     2489999999999999999999999


Q ss_pred             EEEcCCCCcceeEec-cccCceeEEEecCCC--CEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         258 AVDLRGKGKPCYKYK-GFAGCVKDIACPLNE--NLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       258 iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~--~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      |||+++ .+++..-. +..-+|..+.|.+.+  +.|+| .....++||+-.+|+....+.....++.+++-++
T Consensus       254 iyDLRa-~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~  324 (703)
T KOG2321|consen  254 IYDLRA-SKPLLVKDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEPTSDLNDFCFVPG  324 (703)
T ss_pred             EEEccc-CCceeecccCCccceeeecccccCCCceEEe-cchHHhhhcccccCCceeeccccCCcCceeeecC
Confidence            999999 77765443 345689999997753  45555 4556799999999999888877777888777544

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=3.3e-15  Score=140.05  Aligned_cols=234  Identities=11%  Similarity=-0.002  Sum_probs=159.4

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc---CCeEEEEeCCCCccccceeeccccccEEEE
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS---GQKIKIYDTDFKNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~   93 (444)
                      .|.+++......     +.+.  .+...+.+.+|+ |+++.|+..+.   ...|++|++.+++........++. ....+
T Consensus       180 ~l~~~d~dg~~~-----~~lt--~~~~~~~~p~wS-PDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~-~~~~~  250 (429)
T PRK03629        180 ELRVSDYDGYNQ-----FVVH--RSPQPLMSPAWS-PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHN-GAPAF  250 (429)
T ss_pred             eEEEEcCCCCCC-----EEee--cCCCceeeeEEc-CCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCc-CCeEE
Confidence            688888765542     2222  456789999999 79998886543   357999999888654433333332 33678


Q ss_pred             EeCCCeEEEE-ecCC--cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC-Ce--EEEEEcCCceeeeeeec
Q psy8152          94 SRYDECILTA-VKSG--DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE-ND--LKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        94 s~~~~~l~~~-~~dg--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~--i~vwd~~~~~~~~~~~~  167 (444)
                      +|+|+.|+.. +.+|  .|++|++.+++... +..+...+....|+|+++.|+..+.. +.  |.++++.++... .+..
T Consensus       251 SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~  328 (429)
T PRK03629        251 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITW  328 (429)
T ss_pred             CCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Eeec
Confidence            9999987765 4444  58899998887664 44555677899999999988877654 44  444566555432 2222


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC---ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ---GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      ...                  ......|+|+|++|+..+.+   ..|.+||+.   ... ...+... .......|+|+|
T Consensus       329 ~~~------------------~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~---~g~-~~~Lt~~-~~~~~p~~SpDG  385 (429)
T PRK03629        329 EGS------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA---TGG-VQVLTDT-FLDETPSIAPNG  385 (429)
T ss_pred             CCC------------------CccCEEECCCCCEEEEEEccCCCceEEEEECC---CCC-eEEeCCC-CCCCCceECCCC
Confidence            222                  35678899999888776543   368889987   232 2233322 223467899999


Q ss_pred             CEEEEEcCCCc---EEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         245 HYVIVGSTTGD---MMAVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       245 ~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      ++|+.++.++.   ++++++.  +.....+.+|.+.+...+|+|-
T Consensus       386 ~~i~~~s~~~~~~~l~~~~~~--G~~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        386 TMVIYSSSQGMGSVLNLVSTD--GRFKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             CEEEEEEcCCCceEEEEEECC--CCCeEECccCCCCcCCcccCCC
Confidence            99999887764   6777774  6777788888888999999873

>KOG3881|consensus

Probab=99.73  E-value=4.2e-16  Score=133.00  Aligned_cols=218  Identities=11%  Similarity=0.113  Sum_probs=167.2

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc----cccceeeccccccEEEE--Ee-CCCeEEEEecC--CcEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN----FNTNTDVSFGEGDIVGV--SR-YDECILTAVKS--GDVK  110 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~v~~~--s~-~~~~l~~~~~d--g~i~  110 (444)
                      .-.++|..++..   ...|++|-.+|.+.+|....+.    .+..+.  . ...+..+  ++ ....+++|+..  ..+.
T Consensus       103 l~~~~I~gl~~~---dg~Litc~~sG~l~~~~~k~~d~hss~l~~la--~-g~g~~~~r~~~~~p~Iva~GGke~~n~lk  176 (412)
T KOG3881|consen  103 LGTKSIKGLKLA---DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLA--T-GPGLYDVRQTDTDPYIVATGGKENINELK  176 (412)
T ss_pred             cccccccchhhc---CCEEEEEecCCcEEEEeccCCccccccceeee--c-CCceeeeccCCCCCceEecCchhccccee
Confidence            345677777766   5788888889999999987443    111222  1 2333333  34 34556778888  8899


Q ss_pred             EEEcCCCCccccccc---------cCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeC
Q psy8152         111 LWRYKTEPDQWTNFN---------VGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       111 iw~~~~~~~~~~~~~---------~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~  178 (444)
                      |||+...+.++.-..         .+-.++++.|.+.  ...||+++.-+.+++||.+.+ +++..+....+        
T Consensus       177 iwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~--------  248 (412)
T KOG3881|consen  177 IWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN--------  248 (412)
T ss_pred             eeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccC--------
Confidence            999998866642221         1335678899886  889999999999999999974 46777766666        


Q ss_pred             CCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE-EeCCCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK-VDIPDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                                +|+++...|.+++|++|..-+.+..||++   .++.... +.+..+.|++|..+|..++|++++-|..+|
T Consensus       249 ----------~is~~~l~p~gn~Iy~gn~~g~l~~FD~r---~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvR  315 (412)
T KOG3881|consen  249 ----------PISSTGLTPSGNFIYTGNTKGQLAKFDLR---GGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVR  315 (412)
T ss_pred             ----------cceeeeecCCCcEEEEecccchhheeccc---CceeeccccCCccCCcceEEEcCCCceEEeeccceeEE
Confidence                      79999999999999999999999999999   5655555 788889999999999999999999999999


Q ss_pred             EEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         258 AVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       258 iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      |+|+.+ .++++... -.+.++++.+.++
T Consensus       316 IhD~kt-rkll~kvY-vKs~lt~il~~~~  342 (412)
T KOG3881|consen  316 IHDIKT-RKLLHKVY-VKSRLTFILLRDD  342 (412)
T ss_pred             Eeeccc-chhhhhhh-hhccccEEEecCC
Confidence            999999 88887665 2455677777554

>KOG2111|consensus

Probab=99.73  E-value=9.2e-15  Score=121.71  Aligned_cols=184  Identities=13%  Similarity=0.222  Sum_probs=141.1

Q ss_pred             ccEEEecCC------CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC-CCcccc
Q psy8152           7 YNIYIGSST------GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-FKNFNT   79 (444)
Q Consensus         7 ~~l~~g~~d------g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-~~~~~~   79 (444)
                      ...++|+..      +.|.|||=...+       .+..+....+|.++.+.   ...|++.-. +.|+||... ..+.++
T Consensus        60 ~laLVGGg~~pky~pNkviIWDD~k~~-------~i~el~f~~~I~~V~l~---r~riVvvl~-~~I~VytF~~n~k~l~  128 (346)
T KOG2111|consen   60 YLALVGGGSRPKYPPNKVIIWDDLKER-------CIIELSFNSEIKAVKLR---RDRIVVVLE-NKIYVYTFPDNPKLLH  128 (346)
T ss_pred             eEEEecCCCCCCCCCceEEEEecccCc-------EEEEEEeccceeeEEEc---CCeEEEEec-CeEEEEEcCCChhhee
Confidence            344555544      579999943333       23333458899999998   466776665 799999987 566666


Q ss_pred             ceeeccccccEEEEEeCC--CeEEE-EecCCcEEEEEcCCCCc--cccccccCCCeEEEEEeccCCEEEEeeCCCe-EEE
Q psy8152          80 NTDVSFGEGDIVGVSRYD--ECILT-AVKSGDVKLWRYKTEPD--QWTNFNVGPQLECMKHNKHSNIIATGGKEND-LKL  153 (444)
Q Consensus        80 ~~~~~~~~~~v~~~s~~~--~~l~~-~~~dg~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v  153 (444)
                      .+.........+++.|..  .+||. |-.-|.|+|-++...+.  ...+..|...|.|++++.+|.++||+|..|+ |||
T Consensus       129 ~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRI  208 (346)
T KOG2111|consen  129 VIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRI  208 (346)
T ss_pred             eeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEE
Confidence            666555455577777643  23443 34569999999887665  2357789999999999999999999999997 789


Q ss_pred             EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      ||..+|..+..++....                +..|++|+|+|+..+|++++.-|+|+||.++
T Consensus       209 Fdt~~g~~l~E~RRG~d----------------~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~  256 (346)
T KOG2111|consen  209 FDTEDGTLLQELRRGVD----------------RADIYCIAFSPNSSWLAVSSDKGTLHIFSLR  256 (346)
T ss_pred             EEcCCCcEeeeeecCCc----------------hheEEEEEeCCCccEEEEEcCCCeEEEEEee
Confidence            99999999988875444                3469999999999999999999999999998

>KOG2139|consensus

Probab=99.73  E-value=7.3e-15  Score=124.31  Aligned_cols=269  Identities=13%  Similarity=0.113  Sum_probs=173.9

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-----------
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-----------   75 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-----------   75 (444)
                      .-++++..|-.|++|+-....  ...++.    .....|+||+|-|-....|++|+. +-|.+|.....           
T Consensus       111 ~~fava~nddvVriy~ksst~--pt~Lks----~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s  183 (445)
T KOG2139|consen  111 IAFAVATNDDVVRIYDKSSTC--PTKLKS----VSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMS  183 (445)
T ss_pred             hhhhhhccCcEEEEeccCCCC--Cceecc----hhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccccccccccccc
Confidence            346788899999999976632  222222    235789999999766778888887 67999976421           


Q ss_pred             -ccccceeeccccccEEEE--EeCCCeEEEEec-CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeE
Q psy8152          76 -NFNTNTDVSFGEGDIVGV--SRYDECILTAVK-SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDL  151 (444)
Q Consensus        76 -~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  151 (444)
                       .....++.++| .+|+++  .++|..+++++. +..|.||+..++..+.......+.+.-+.|+|++.+|+.++-|+..
T Consensus       184 ~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davf  262 (445)
T KOG2139|consen  184 THHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVF  262 (445)
T ss_pred             ccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEeccccee
Confidence             12233444454 677766  567888888876 5789999999998886443566789999999999999999999999


Q ss_pred             EEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCC---c-----
Q psy8152         152 KLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQ---R-----  222 (444)
Q Consensus       152 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~---~-----  222 (444)
                      ++|...............+                  .|...+|+|.|.+|+ +++..  -++|.+.-...   .     
T Consensus       263 rlw~e~q~wt~erw~lgsg------------------rvqtacWspcGsfLLf~~sgs--p~lysl~f~~~~~~~~~~~~  322 (445)
T KOG2139|consen  263 RLWQENQSWTKERWILGSG------------------RVQTACWSPCGSFLLFACSGS--PRLYSLTFDGEDSVFLRPQS  322 (445)
T ss_pred             eeehhcccceecceeccCC------------------ceeeeeecCCCCEEEEEEcCC--ceEEEEeecCCCccccCccc
Confidence            9997655332222222222                  599999999996655 44433  33444330000   0     


Q ss_pred             ----cceEEEe-----C----CCCCeeEEEEccCCCEEEEEcCCC--------cEEEEEcCCCCcceeEec-cc--cCce
Q psy8152         223 ----RPVLKVD-----I----PDVALSCITTTNQSHYVIVGSTTG--------DMMAVDLRGKGKPCYKYK-GF--AGCV  278 (444)
Q Consensus       223 ----~~~~~~~-----~----~~~~i~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~~~~~~~~~-~h--~~~i  278 (444)
                          .++..+.     .    -.+.+.+++|.|.|.+||+.-..+        .|.+||.+. ..++.-.. +.  ....
T Consensus       323 ~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~-sp~vels~cg~i~ge~P  401 (445)
T KOG2139|consen  323 IKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRK-SPPVELSYCGMIGGEYP  401 (445)
T ss_pred             ceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccc-cCceEEEecccccCCCC
Confidence                0011111     1    145678999999999999865443        477888876 33332221 11  1123


Q ss_pred             eEEEecC---CCCEEEEEECCCcEEEEEc
Q psy8152         279 KDIACPL---NENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       279 ~~~~~s~---~~~~l~s~~~dg~i~vw~~  304 (444)
                      ..+.|+|   ++.+|..+=.-|.+.-|.+
T Consensus       402 ~~IsF~pl~n~g~lLsiaWsTGriq~ypl  430 (445)
T KOG2139|consen  402 AYISFGPLKNEGRLLSIAWSTGRIQRYPL  430 (445)
T ss_pred             ceEEeeecccCCcEEEEEeccCceEeeee
Confidence            4556665   4556666666677766655

>KOG0644|consensus

Probab=99.72  E-value=4.3e-17  Score=151.40  Aligned_cols=267  Identities=10%  Similarity=0.124  Sum_probs=200.7

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+.+|++|+.|..++||...+..+    +..+.  +|.+.|+.++.+ .+..++++++.|..|++|.+..+..+..+.  
T Consensus       201 tg~~Iitgsdd~lvKiwS~et~~~----lAs~r--Ghs~ditdlavs-~~n~~iaaaS~D~vIrvWrl~~~~pvsvLr--  271 (1113)
T KOG0644|consen  201 TGRYIITGSDDRLVKIWSMETARC----LASCR--GHSGDITDLAVS-SNNTMIAAASNDKVIRVWRLPDGAPVSVLR--  271 (1113)
T ss_pred             ccceEeecCccceeeeeeccchhh----hccCC--CCccccchhccc-hhhhhhhhcccCceEEEEecCCCchHHHHh--
Confidence            468899999999999999888775    22222  999999999999 678889999999999999999999998886  


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      +|.+.|+++.+....  +.+.||++++||.+-.-.+.    .-+.....+.++.|...+.-++|++.++.-..|.+....
T Consensus       272 ghtgavtaiafsP~~--sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~  349 (1113)
T KOG0644|consen  272 GHTGAVTAIAFSPRA--SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA  349 (1113)
T ss_pred             ccccceeeeccCccc--cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhh
Confidence            889999887544332  77899999999987111111    011223456677777788899999999988888765311


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT  239 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~  239 (444)
                      .-      ..                  .+.-+.++.+. .+.+++-.+..+++|++.   .+...+.+.+|...+..+.
T Consensus       350 ~~------~~------------------~lif~t~ssd~~~~~~~ar~~~~~~vwnl~---~g~l~H~l~ghsd~~yvLd  402 (1113)
T KOG0644|consen  350 WR------SN------------------LLIFVTRSSDLSSIVVTARNDHRLCVWNLY---TGQLLHNLMGHSDEVYVLD  402 (1113)
T ss_pred             hh------cc------------------ceEEEeccccccccceeeeeeeEeeeeecc---cchhhhhhcccccceeeee
Confidence            10      00                  01111111111 456667778889999999   8888888889999999999


Q ss_pred             EccCCC-EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         240 TTNQSH-YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       240 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                      ++|-.. ...+++.||...|||+-. +.+++.+.-..+.+...+||++|..++....-|.++|.....++..
T Consensus       403 ~Hpfn~ri~msag~dgst~iwdi~e-g~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~  473 (1113)
T KOG0644|consen  403 VHPFNPRIAMSAGYDGSTIIWDIWE-GIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKSQ  473 (1113)
T ss_pred             ecCCCcHhhhhccCCCceEeeeccc-CCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCccc
Confidence            999654 455699999999999998 8887766533455667799999999998888899999987665443

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.72  E-value=3.8e-13  Score=122.68  Aligned_cols=295  Identities=13%  Similarity=0.140  Sum_probs=185.4

Q ss_pred             EEEecCC----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----CCeEEEEeCCCC--ccc
Q psy8152           9 IYIGSST----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----GQKIKIYDTDFK--NFN   78 (444)
Q Consensus         9 l~~g~~d----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d~~i~vw~~~~~--~~~   78 (444)
                      +++|+..    +.|++|.+.........+..+   .-......|+++ +++++|++...    .+.|..|.+...  ++.
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~---~~~~~Ps~l~~~-~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~   77 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTV---AEGENPSWLAVS-PDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLT   77 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEE---EESSSECCEEE--TTSSEEEEEETTSSTTTEEEEEEEETTTTEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeee---cCCCCCceEEEE-eCCCEEEEEEccccCCCCEEEEEECCCcceeE
Confidence            5677766    799999994433223333322   234566778899 78999998876    479999988753  333


Q ss_pred             c--ceeeccccccEEEEEeCCCeEEEEec-CCcEEEEEcCCC-Ccccc--cc-----------ccCCCeEEEEEeccCCE
Q psy8152          79 T--NTDVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYKTE-PDQWT--NF-----------NVGPQLECMKHNKHSNI  141 (444)
Q Consensus        79 ~--~~~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~-~~~~~--~~-----------~~~~~v~~~~~~~~~~~  141 (444)
                      .  .....+....-.+++|++++|+++.. +|.|.++++... .....  ..           .......++.|+|++++
T Consensus        78 ~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~  157 (345)
T PF10282_consen   78 LLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRF  157 (345)
T ss_dssp             EEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSE
T ss_pred             EeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCE
Confidence            2  22222333344667899999888875 899999999863 32221  11           12355789999999998


Q ss_pred             EEEeeC-CCeEEEEEcCCce--ee--eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEE
Q psy8152         142 IATGGK-ENDLKLWDLNTTK--NI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYD  215 (444)
Q Consensus       142 l~~~~~-d~~i~vwd~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d  215 (444)
                      +++... ...|.+|++....  ..  ..+....                 ....+.++|+|+++++.+. -.++.|.+|+
T Consensus       158 v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~-----------------G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~  220 (345)
T PF10282_consen  158 VYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPP-----------------GSGPRHLAFSPDGKYAYVVNELSNTVSVFD  220 (345)
T ss_dssp             EEEEETTTTEEEEEEE-TTS-TEEEEEEEECST-----------------TSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred             EEEEecCCCEEEEEEEeCCCceEEEeecccccc-----------------CCCCcEEEEcCCcCEEEEecCCCCcEEEEe
Confidence            887543 4579999997644  21  1111111                 1248899999999877554 5578899999


Q ss_pred             cC-CCCCccceEEEeCC------CCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCC-C--cceeEeccccCceeEEEec
Q psy8152         216 PK-ITTQRRPVLKVDIP------DVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGK-G--KPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       216 ~~-~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~-~--~~~~~~~~h~~~i~~~~~s  284 (444)
                      +. .......+..+...      ......|+++|+|++|+++. ..+.|.+|++... +  +.+..+.......+.++++
T Consensus       221 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s  300 (345)
T PF10282_consen  221 YDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFS  300 (345)
T ss_dssp             EETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-
T ss_pred             ecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEe
Confidence            87 11222233333221      12567899999999988754 4668999999431 2  2233333333457899999


Q ss_pred             CCCCEEEEEE-CCCcEEEEEc--CCCceEEEee--cCCceeEEEE
Q psy8152         285 LNENLILSVS-LDRHFRVHDF--HSKKLLRKDY--MQSRLTSILV  324 (444)
Q Consensus       285 ~~~~~l~s~~-~dg~i~vw~~--~~~~~~~~~~--~~~~i~~~~~  324 (444)
                      |+|++|+++. .++.|.+|++  .+|.+.....  .-....|+.|
T Consensus       301 ~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  301 PDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             CCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            9999998887 5678999976  4676655432  3344556654

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.71  E-value=1.7e-14  Score=131.23  Aligned_cols=314  Identities=14%  Similarity=0.076  Sum_probs=193.2

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccc
Q psy8152           9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG   88 (444)
Q Consensus         9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~   88 (444)
                      +++-..+|.|.+.|..+.+.    +..+..  ....-..+.|+ ++++++++++.||.|.++|+.+++.+..+.. +...
T Consensus         9 ~V~~~~~~~v~viD~~t~~~----~~~i~~--~~~~h~~~~~s-~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~   80 (369)
T PF02239_consen    9 YVVERGSGSVAVIDGATNKV----VARIPT--GGAPHAGLKFS-PDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNP   80 (369)
T ss_dssp             EEEEGGGTEEEEEETTT-SE----EEEEE---STTEEEEEE-T-T-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEE
T ss_pred             EEEecCCCEEEEEECCCCeE----EEEEcC--CCCceeEEEec-CCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCc
Confidence            35567789999999888764    222321  22223446788 7999999999999999999999999988874 4455


Q ss_pred             cEEEEEeCCCeEEEEe-cCCcEEEEEcCCCCccccccc-------cCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCc
Q psy8152          89 DIVGVSRYDECILTAV-KSGDVKLWRYKTEPDQWTNFN-------VGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTT  159 (444)
Q Consensus        89 ~v~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~  159 (444)
                      .-.+++++|+++++++ ..+.+.++|.++.+.++.+..       ....+..+..+|....++..- .-+.|.+.|....
T Consensus        81 ~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~  160 (369)
T PF02239_consen   81 RGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP  160 (369)
T ss_dssp             EEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS
T ss_pred             ceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc
Confidence            5577899999988775 589999999999888763322       234677888888777555544 4588888887765


Q ss_pred             eeeee-eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeC----CCC
Q psy8152         160 KNIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDI----PDV  233 (444)
Q Consensus       160 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~----~~~  233 (444)
                      +.+.. ......                  ......|+|++++++++ .....|.++|..   ..+.+..+..    |..
T Consensus       161 ~~~~~~~i~~g~------------------~~~D~~~dpdgry~~va~~~sn~i~viD~~---~~k~v~~i~~g~~p~~~  219 (369)
T PF02239_consen  161 KNLKVTTIKVGR------------------FPHDGGFDPDGRYFLVAANGSNKIAVIDTK---TGKLVALIDTGKKPHPG  219 (369)
T ss_dssp             SCEEEEEEE--T------------------TEEEEEE-TTSSEEEEEEGGGTEEEEEETT---TTEEEEEEE-SSSBEET
T ss_pred             cccceeeecccc------------------cccccccCcccceeeecccccceeEEEeec---cceEEEEeecccccccc
Confidence            43321 111222                  47789999999887654 557799999988   5555544432    222


Q ss_pred             CeeEE-------EEc--cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE----ECCCcEE
Q psy8152         234 ALSCI-------TTT--NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV----SLDRHFR  300 (444)
Q Consensus       234 ~i~~~-------~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~----~~dg~i~  300 (444)
                      ++..+       .|.  ..+...++.-....+.+|+... .+.+.++....++ ..+..+|++++|.+.    ...++|.
T Consensus       220 ~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~-wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~  297 (369)
T PF02239_consen  220 PGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYA-WKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQ  297 (369)
T ss_dssp             TEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTB-TSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EE
T ss_pred             ccccccCCCcceEEeeccccceecccccCCccccchhhc-CeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEE
Confidence            22222       121  1222332222233566788888 8999999876666 788899999999988    4458899


Q ss_pred             EEEcCCCceEEEeecCC--ceeEEEEcCCCcccccchhhhhccccc-cCCCccccCCCcccccc
Q psy8152         301 VHDFHSKKLLRKDYMQS--RLTSILVRSDFSLENETKKEEQEHSEE-KGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       301 vw~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~i~~W~~~~~~~~~  361 (444)
                      ++|..+.+.+.++....  ++..+.|+.+-.        ...+|.- .++.|.++|..+.+...
T Consensus       298 viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~--------~v~vS~~~~~~~i~v~D~~Tl~~~~  353 (369)
T PF02239_consen  298 VIDKKTLKVVKTITPGPGKRVVHMEFNPDGK--------EVWVSVWDGNGAIVVYDAKTLKEKK  353 (369)
T ss_dssp             EEECCGTEEEE-HHHHHT--EEEEEE-TTSS--------EEEEEEE--TTEEEEEETTTTEEEE
T ss_pred             EEECcCcceeEEEeccCCCcEeccEECCCCC--------EEEEEEecCCCEEEEEECCCcEEEE
Confidence            99999998887776333  477788776522        2233333 33379999988766543

...

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.71  E-value=2.1e-14  Score=130.64  Aligned_cols=289  Identities=13%  Similarity=0.079  Sum_probs=181.2

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY-SGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~   81 (444)
                      +.++.++++.+.+|.|.++|+.+.+. .   ..+..   .....+++++ +++++++++. ..+.+.++|.++.+.++.+
T Consensus        45 s~Dgr~~yv~~rdg~vsviD~~~~~~-v---~~i~~---G~~~~~i~~s-~DG~~~~v~n~~~~~v~v~D~~tle~v~~I  116 (369)
T PF02239_consen   45 SPDGRYLYVANRDGTVSVIDLATGKV-V---ATIKV---GGNPRGIAVS-PDGKYVYVANYEPGTVSVIDAETLEPVKTI  116 (369)
T ss_dssp             TT-SSEEEEEETTSEEEEEETTSSSE-E---EEEE----SSEEEEEEE---TTTEEEEEEEETTEEEEEETTT--EEEEE
T ss_pred             cCCCCEEEEEcCCCeEEEEECCcccE-E---EEEec---CCCcceEEEc-CCCCEEEEEecCCCceeEeccccccceeec
Confidence            45677888899999999999999885 2   33332   4556889999 7999998775 5799999999999998887


Q ss_pred             eeccc-----cccEEEE--EeCCCeEEEEec-CCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEe-eCCCeE
Q psy8152          82 DVSFG-----EGDIVGV--SRYDECILTAVK-SGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATG-GKENDL  151 (444)
Q Consensus        82 ~~~~~-----~~~v~~~--s~~~~~l~~~~~-dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i  151 (444)
                      ...+.     ..++.++  ++....++..-. .+.|.+.|+...+.+. .............|+|++++++.+ ...+.|
T Consensus       117 ~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i  196 (369)
T PF02239_consen  117 PTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKI  196 (369)
T ss_dssp             E--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEE
T ss_pred             ccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeeccccccee
Confidence            64332     2355555  566665555544 5888888877665443 234455677889999999987664 557799


Q ss_pred             EEEEcCCceeeeeeecccc--eeeEee-eCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152         152 KLWDLNTTKNIFSAKNVSH--RVLVYS-VKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       152 ~vwd~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      -++|..+++.+..+.....  ...... .+|          -....|..  .+...++.-....+.+|+..   ..+.+.
T Consensus       197 ~viD~~~~k~v~~i~~g~~p~~~~~~~~php----------~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~---~wkvv~  263 (369)
T PF02239_consen  197 AVIDTKTGKLVALIDTGKKPHPGPGANFPHP----------GFGPVWATSGLGYFAIPLIGTDPVSVHDDY---AWKVVK  263 (369)
T ss_dssp             EEEETTTTEEEEEEE-SSSBEETTEEEEEET----------TTEEEEEEEBSSSSEEEEEE--TTT-STTT---BTSEEE
T ss_pred             EEEeeccceEEEEeeccccccccccccccCC----------CcceEEeeccccceecccccCCccccchhh---cCeEEE
Confidence            9999999887765543211  000000 011          11112221  12222222223356678877   788899


Q ss_pred             EEeCCCCCeeEEEEccCCCEEEEE----cCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEEECC--CcE
Q psy8152         227 KVDIPDVALSCITTTNQSHYVIVG----STTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSVSLD--RHF  299 (444)
Q Consensus       227 ~~~~~~~~i~~~~~~~~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~~~d--g~i  299 (444)
                      ++.....+ ..+..+|++++|++.    ...+.|.++|.++ .+.+.++... ...+..+.|+++|+++..+..+  +.|
T Consensus       264 ~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~t-l~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i  341 (369)
T PF02239_consen  264 TIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKT-LKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAI  341 (369)
T ss_dssp             EEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCG-TEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEE
T ss_pred             EEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcC-cceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEE
Confidence            88877666 778889999999987    5568999999999 7777777632 2358899999999866655443  369


Q ss_pred             EEEEcCCCceEEEee
Q psy8152         300 RVHDFHSKKLLRKDY  314 (444)
Q Consensus       300 ~vw~~~~~~~~~~~~  314 (444)
                      .|||..+.+++.++.
T Consensus       342 ~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  342 VVYDAKTLKEKKRIP  356 (369)
T ss_dssp             EEEETTTTEEEEEEE
T ss_pred             EEEECCCcEEEEEEE
Confidence            999999999998877

...

>KOG2139|consensus

Probab=99.71  E-value=8.2e-15  Score=123.99  Aligned_cols=259  Identities=11%  Similarity=0.168  Sum_probs=169.7

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCC-CeEEEEecCCcEEEEEcCCC-
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYD-ECILTAVKSGDVKLWRYKTE-  117 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~-~~l~~~~~dg~i~iw~~~~~-  117 (444)
                      ...+..++|+ +.-..++++..|-.|++|+-.. ++...++. .....|.++  -|.+ .-|++|+.. -|.+|..... 
T Consensus        98 ~~dlr~~aWh-qH~~~fava~nddvVriy~kss-t~pt~Lks-~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tl  173 (445)
T KOG2139|consen   98 EIDLRGVAWH-QHIIAFAVATNDDVVRIYDKSS-TCPTKLKS-VSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTL  173 (445)
T ss_pred             hcceeeEeec-hhhhhhhhhccCcEEEEeccCC-CCCceecc-hhhcceeEEEeccCCcceeeeeecc-eeEEEEcCccc
Confidence            3457889999 6777888999999999999765 44444432 224455555  4544 456666665 6899986431 


Q ss_pred             ---Cccc----------cccccCCCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeeee-ecccceeeEeeeCCCcc
Q psy8152         118 ---PDQW----------TNFNVGPQLECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSA-KNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       118 ---~~~~----------~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~  182 (444)
                         +.+.          ...+| .+|+++.|+++|..+++++. +..|.|||..++..+... ++..             
T Consensus       174 n~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glg-------------  239 (445)
T KOG2139|consen  174 NANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLG-------------  239 (445)
T ss_pred             ccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCC-------------
Confidence               1110          11223 68999999999999999885 678999999997765433 3333             


Q ss_pred             cccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                            .+.-+.|+|++.+|++++-|+..++|...  .+..... .....+.|...+|+|+|++|+..+. |.-++|.+.
T Consensus       240 ------g~slLkwSPdgd~lfaAt~davfrlw~e~--q~wt~er-w~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~  309 (445)
T KOG2139|consen  240 ------GFSLLKWSPDGDVLFAATCDAVFRLWQEN--QSWTKER-WILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLT  309 (445)
T ss_pred             ------ceeeEEEcCCCCEEEEecccceeeeehhc--ccceecc-eeccCCceeeeeecCCCCEEEEEEc-CCceEEEEe
Confidence                  48889999999999999999999999766  1222222 2334458999999999998765433 223455543


Q ss_pred             CCCc--------------ceeEec------c---ccCceeEEEecCCCCEEEEEECCC--------cEEEEEcCCCceEE
Q psy8152         263 GKGK--------------PCYKYK------G---FAGCVKDIACPLNENLILSVSLDR--------HFRVHDFHSKKLLR  311 (444)
Q Consensus       263 ~~~~--------------~~~~~~------~---h~~~i~~~~~s~~~~~l~s~~~dg--------~i~vw~~~~~~~~~  311 (444)
                      ..++              ++..++      +   -.+.+.+++|.|.|.+||+.-..+        .|.+|+......+.
T Consensus       310 f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~ve  389 (445)
T KOG2139|consen  310 FDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVE  389 (445)
T ss_pred             ecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceE
Confidence            2111              111111      1   135788999999999999876543        35667766544333


Q ss_pred             Eee----cCCceeEEEEcCCC
Q psy8152         312 KDY----MQSRLTSILVRSDF  328 (444)
Q Consensus       312 ~~~----~~~~i~~~~~~~~~  328 (444)
                      -.+    .......+.|.+.+
T Consensus       390 ls~cg~i~ge~P~~IsF~pl~  410 (445)
T KOG2139|consen  390 LSYCGMIGGEYPAYISFGPLK  410 (445)
T ss_pred             EEecccccCCCCceEEeeecc
Confidence            322    22335566776654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=2.1e-14  Score=134.69  Aligned_cols=232  Identities=10%  Similarity=0.027  Sum_probs=148.4

Q ss_pred             eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec---CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK---SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      .|.+||........ +........-..++|+|+.|+..+.   ...|++|++.+++... +......+..++|+|+|+.|
T Consensus       180 ~l~~~d~dg~~~~~-lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~L  257 (429)
T PRK03629        180 ELRVSDYDGYNQFV-VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKL  257 (429)
T ss_pred             eEEEEcCCCCCCEE-eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEE
Confidence            68899987554333 2212222334567899998886543   4579999998886543 33344455678999999988


Q ss_pred             EEe-eCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-ceEEEE--Ec
Q psy8152         143 ATG-GKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-GYVRVY--DP  216 (444)
Q Consensus       143 ~~~-~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~i~--d~  216 (444)
                      +.. +.+|  .|++||+.+++....... ..                  .+....|+|+|+.|+..+.. +...||  ++
T Consensus       258 a~~~~~~g~~~I~~~d~~tg~~~~lt~~-~~------------------~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~  318 (429)
T PRK03629        258 AFALSKTGSLNLYVMDLASGQIRQVTDG-RS------------------NNTEPTWFPDSQNLAYTSDQAGRPQVYKVNI  318 (429)
T ss_pred             EEEEcCCCCcEEEEEECCCCCEEEccCC-CC------------------CcCceEECCCCCEEEEEeCCCCCceEEEEEC
Confidence            865 3344  588999987765433222 22                  36788999999988766653 444455  55


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      .   .. ....+...........|+|+|++|+..+.+   ..|++||+.+ +.. ..+... .......|+|+|++|+.+
T Consensus       319 ~---~g-~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~-g~~-~~Lt~~-~~~~~p~~SpDG~~i~~~  391 (429)
T PRK03629        319 N---GG-APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-QVLTDT-FLDETPSIAPNGTMVIYS  391 (429)
T ss_pred             C---CC-CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCC-CCe-EEeCCC-CCCCCceECCCCCEEEEE
Confidence            5   22 223333344445678999999998875543   3588899987 653 344321 223467899999999998


Q ss_pred             ECCCc---EEEEEcCCCceEEEee-cCCceeEEEEcC
Q psy8152         294 SLDRH---FRVHDFHSKKLLRKDY-MQSRLTSILVRS  326 (444)
Q Consensus       294 ~~dg~---i~vw~~~~~~~~~~~~-~~~~i~~~~~~~  326 (444)
                      +.++.   ++++++..+ ....+. +.+.+...+|++
T Consensus       392 s~~~~~~~l~~~~~~G~-~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        392 SSQGMGSVLNLVSTDGR-FKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             EcCCCceEEEEEECCCC-CeEECccCCCCcCCcccCC
Confidence            87764   677777544 334443 555555555543

>KOG1310|consensus

Probab=99.69  E-value=3.5e-16  Score=139.00  Aligned_cols=219  Identities=11%  Similarity=0.148  Sum_probs=157.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE--e--CCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS--R--YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s--~--~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|.+.|.|+.|+ .+|.+|++|+.|-.+.|||....+.+..+. .+|...|.++-  |  +++.+++|..|..|+++|+.
T Consensus        48 GH~GCVN~LeWn-~dG~lL~SGSDD~r~ivWd~~~~KllhsI~-TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~  125 (758)
T KOG1310|consen   48 GHTGCVNCLEWN-ADGELLASGSDDTRLIVWDPFEYKLLHSIS-TGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD  125 (758)
T ss_pred             cccceecceeec-CCCCEEeecCCcceEEeecchhcceeeeee-cccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence            999999999999 899999999999999999998888888776 48888887763  4  56789999999999999998


Q ss_pred             CC----------CccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152         116 TE----------PDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       116 ~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      ..          ........|...|..++..|++ +.+.+++.||+|+-+|++.......-.  .-.+....+.|.    
T Consensus       126 ~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~--~~~~~l~ny~~~----  199 (758)
T KOG1310|consen  126 SSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE--DCPSILVNYNPQ----  199 (758)
T ss_pred             cccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc--cccHHHHHhchh----
Confidence            42          2233455688999999999965 899999999999999998632110000  000001111111    


Q ss_pred             cCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCC-------C---C-----ccceEEEe-CCC-----------CCee
Q psy8152         185 RRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKIT-------T---Q-----RRPVLKVD-IPD-----------VALS  236 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-------~---~-----~~~~~~~~-~~~-----------~~i~  236 (444)
                        .....|+..+|.. .+|++|+.+-..++||.+..       .   .     ..++..+. +|-           ..++
T Consensus       200 --lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t  277 (758)
T KOG1310|consen  200 --LIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCT  277 (758)
T ss_pred             --hheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeE
Confidence              1246788999877 88999999999999995510       0   0     01122221 111           1256


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      -+.|+|+|.-|++.-..-.|+++|+.. ++...
T Consensus       278 ~vtfnpNGtElLvs~~gEhVYlfdvn~-~~~~~  309 (758)
T KOG1310|consen  278 YVTFNPNGTELLVSWGGEHVYLFDVNE-DKSPT  309 (758)
T ss_pred             EEEECCCCcEEEEeeCCeEEEEEeecC-CCCce
Confidence            688999998888776667899999987 55443

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=1.7e-14  Score=135.82  Aligned_cols=234  Identities=12%  Similarity=0.044  Sum_probs=155.9

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEE
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVG   92 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~   92 (444)
                      ..|.+||......     +.+.  .|...+.+.+|+ |+++.|+..+..   ..|++|++.+++........+ ......
T Consensus       184 ~~l~i~D~~g~~~-----~~lt--~~~~~v~~p~wS-pDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g-~~~~~~  254 (433)
T PRK04922        184 YALQVADSDGYNP-----QTIL--RSAEPILSPAWS-PDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG-INGAPS  254 (433)
T ss_pred             EEEEEECCCCCCc-----eEee--cCCCccccccCC-CCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCC-CccCce
Confidence            3588888754431     2222  567789999999 799999987643   479999998877544322222 223457


Q ss_pred             EEeCCCeEE-EEecCC--cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CCe--EEEEEcCCceeeeeee
Q psy8152          93 VSRYDECIL-TAVKSG--DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-END--LKLWDLNTTKNIFSAK  166 (444)
Q Consensus        93 ~s~~~~~l~-~~~~dg--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~vwd~~~~~~~~~~~  166 (444)
                      ++|+|+.|+ +.+.+|  .|++|++.+++... +..+.......+|+|+++.|+.++. .|.  |.++++.+++... +.
T Consensus       255 ~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt  332 (433)
T PRK04922        255 FSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR-LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LT  332 (433)
T ss_pred             ECCCCCEEEEEEeCCCCceEEEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-ee
Confidence            899998765 445555  59999998887653 5555555678899999998887764 444  6666766654322 22


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc---eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG---YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      ....                  ....++|+|+|++|+..+.++   .|.+|++.   ..... .+. +........|+|+
T Consensus       333 ~~g~------------------~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~---~g~~~-~Lt-~~~~~~~p~~spd  389 (433)
T PRK04922        333 FQGN------------------YNARASVSPDGKKIAMVHGSGGQYRIAVMDLS---TGSVR-TLT-PGSLDESPSFAPN  389 (433)
T ss_pred             cCCC------------------CccCEEECCCCCEEEEEECCCCceeEEEEECC---CCCeE-ECC-CCCCCCCceECCC
Confidence            1122                  345689999999888765433   69999987   33322 232 2223456799999


Q ss_pred             CCEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEecC
Q psy8152         244 SHYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL  285 (444)
Q Consensus       244 ~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~  285 (444)
                      |++|+..+..   +.|+++++.  +.....+..+.+.+...+|+|
T Consensus       390 G~~i~~~s~~~g~~~L~~~~~~--g~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        390 GSMVLYATREGGRGVLAAVSTD--GRVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             CCEEEEEEecCCceEEEEEECC--CCceEEcccCCCCCCCCccCC
Confidence            9988776543   457888875  556666666667777888887

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.67  E-value=1.1e-14  Score=120.45  Aligned_cols=115  Identities=19%  Similarity=0.370  Sum_probs=92.6

Q ss_pred             ceeEEEEecCCCEEEEE--eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC---CCcEEEEEcCC
Q psy8152         189 WVNGISFLPNSDKVAVC--SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST---TGDMMAVDLRG  263 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~  263 (444)
                      +|.+++|+|+++.||+.  ..++.|.+||++    ..++..+.  ...+..+.|+|+|++|++++.   .|.|.+||+++
T Consensus        61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~----~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK----GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             ceEEEEECcCCCEEEEEEccCCcccEEEcCc----ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            59999999999887654  457799999997    56666554  456789999999999999764   46799999998


Q ss_pred             CCcceeEeccccCceeEEEecCCCCEEEEEEC------CCcEEEEEcCCCceEEEe
Q psy8152         264 KGKPCYKYKGFAGCVKDIACPLNENLILSVSL------DRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       264 ~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~------dg~i~vw~~~~~~~~~~~  313 (444)
                       .+++.++. | ..++.++|+|+|++|++++.      |..++||++. |+++.+.
T Consensus       135 -~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~  186 (194)
T PF08662_consen  135 -KKKISTFE-H-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKK  186 (194)
T ss_pred             -CEEeeccc-c-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEec
Confidence             88888776 3 34789999999999999874      7889999996 5555543

>KOG1310|consensus

Probab=99.66  E-value=2.2e-15  Score=134.02  Aligned_cols=211  Identities=17%  Similarity=0.198  Sum_probs=153.2

Q ss_pred             eccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcC
Q psy8152          83 VSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        83 ~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~  157 (444)
                      +.+|.+.|.++.  .+|.+|++|+.|-.+.|||.-..+.+. ...+|.+.|.++.|-|  +..++++|..|..|++||+.
T Consensus        46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~  125 (758)
T KOG1310|consen   46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD  125 (758)
T ss_pred             hccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence            358999998885  479999999999999999988766665 4457999999999999  67789999999999999998


Q ss_pred             Cce----------eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152         158 TTK----------NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       158 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      ..+          ....+..|..                  .|..|+..|++ ..+.+++.||+|+-||++......+-.
T Consensus       126 ~~~~~~~d~~~~~~~~~~~cht~------------------rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~  187 (758)
T KOG1310|consen  126 SSKEGGMDHGMEETTRCWSCHTD------------------RVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE  187 (758)
T ss_pred             cccccccccCccchhhhhhhhhh------------------hhhheecCCCCCceEEEecCCcceeeecccCCccCCccc
Confidence            522          2333333444                  57888888888 889999999999999999321222211


Q ss_pred             -------EEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCC-----------------CcceeEec-ccc-----
Q psy8152         227 -------KVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGK-----------------GKPCYKYK-GFA-----  275 (444)
Q Consensus       227 -------~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~-----------------~~~~~~~~-~h~-----  275 (444)
                             .+...--...++.++|. ..+|++|+.+-..++||.+..                 ..++..|. +|.     
T Consensus       188 ~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~g  267 (758)
T KOG1310|consen  188 DCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQG  267 (758)
T ss_pred             cccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccc
Confidence                   11112234578899996 578899999999999995430                 01222222 232     


Q ss_pred             ------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE
Q psy8152         276 ------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR  311 (444)
Q Consensus       276 ------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~  311 (444)
                            ..++.+.|+|+|.-|+..-..-.|+++++..++...
T Consensus       268 n~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~  309 (758)
T KOG1310|consen  268 NLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPT  309 (758)
T ss_pred             ccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCce
Confidence                  125667999999766665556679999998766543

>KOG2321|consensus

Probab=99.66  E-value=5e-14  Score=126.20  Aligned_cols=281  Identities=13%  Similarity=0.119  Sum_probs=192.4

Q ss_pred             CCCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           2 TLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         2 s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      |+.....+++|...-.|++|++..-..      .+...-....|.-.-++ .+-..++.-..|.+|.+...........+
T Consensus        60 s~DGqY~lAtG~YKP~ikvydlanLSL------KFERhlDae~V~feiLs-DD~SK~v~L~~DR~IefHak~G~hy~~RI  132 (703)
T KOG2321|consen   60 SPDGQYLLATGTYKPQIKVYDLANLSL------KFERHLDAEVVDFEILS-DDYSKSVFLQNDRTIEFHAKYGRHYRTRI  132 (703)
T ss_pred             cCCCcEEEEecccCCceEEEEccccee------eeeecccccceeEEEec-cchhhheEeecCceeeehhhcCeeeeeec
Confidence            455567889999999999999876552      11111112344444455 55556666667777766543211111111


Q ss_pred             eeccccccEEEEE-eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          82 DVSFGEGDIVGVS-RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        82 ~~~~~~~~v~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      .   ..+.-++++ |.-. |++++....|+-+++..|+.+..+....+.++++..++-..+|++|+.+|.|..||.+...
T Consensus       133 P---~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks  208 (703)
T KOG2321|consen  133 P---KFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKS  208 (703)
T ss_pred             C---cCCccccccCCCcc-EEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhh
Confidence            1   112222232 3333 4444555688999999999987666667899999999988899999999999999999866


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-eCCCCCeeEEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-DIPDVALSCIT  239 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~  239 (444)
                      .+.++....+    +..+|..   .....|+++.|+.+|-.+++|+..|.+.|||++   ..+++..- .....+|..+.
T Consensus       209 rv~~l~~~~~----v~s~pg~---~~~~svTal~F~d~gL~~aVGts~G~v~iyDLR---a~~pl~~kdh~~e~pi~~l~  278 (703)
T KOG2321|consen  209 RVGTLDAASS----VNSHPGG---DAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLR---ASKPLLVKDHGYELPIKKLD  278 (703)
T ss_pred             hheeeecccc----cCCCccc---cccCcceEEEecCCceeEEeeccCCcEEEEEcc---cCCceeecccCCccceeeec
Confidence            6555433222    0011110   011249999999999999999999999999999   66666532 23456888999


Q ss_pred             EccC--CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         240 TTNQ--SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       240 ~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      |.+.  ++.|++. ....++|||-.+ +++...+.. ...++.+++-|++.+++++-.+..+..|=+..
T Consensus       279 ~~~~~~q~~v~S~-Dk~~~kiWd~~~-Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  279 WQDTDQQNKVVSM-DKRILKIWDECT-GKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             ccccCCCceEEec-chHHhhhccccc-CCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence            9775  4455544 456789999999 999988874 55699999999999999999888887776654

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.66  E-value=1.2e-13  Score=130.38  Aligned_cols=215  Identities=11%  Similarity=0.054  Sum_probs=143.6

Q ss_pred             CeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEec---CCcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVK---SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      ..|.+||...... ..+.  .+...+  ..++|+|+.|+..+.   +..|++|++.+++... +..+...+...+|+|+|
T Consensus       182 ~~l~~~d~dg~~~-~~lt--~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG  257 (435)
T PRK05137        182 KRLAIMDQDGANV-RYLT--DGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-VGNFPGMTFAPRFSPDG  257 (435)
T ss_pred             eEEEEECCCCCCc-EEEe--cCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-eecCCCcccCcEECCCC
Confidence            3788888864433 3333  334445  456899998887764   4689999999887653 55566778899999999


Q ss_pred             CEEE-EeeCCCe--EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc--eEEE
Q psy8152         140 NIIA-TGGKEND--LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG--YVRV  213 (444)
Q Consensus       140 ~~l~-~~~~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~i  213 (444)
                      +.|+ +.+.++.  |.+||+.++... .+..+..                  ......|+|+|+.|+..+. ++  .|++
T Consensus       258 ~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~------------------~~~~~~~spDG~~i~f~s~~~g~~~Iy~  318 (435)
T PRK05137        258 RKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPA------------------IDTSPSYSPDGSQIVFESDRSGSPQLYV  318 (435)
T ss_pred             CEEEEEEecCCCceEEEEECCCCceE-EccCCCC------------------ccCceeEcCCCCEEEEEECCCCCCeEEE
Confidence            8776 4455554  777788776543 3332222                  3567899999988876653 33  6788


Q ss_pred             EEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE
Q psy8152         214 YDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI  290 (444)
Q Consensus       214 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l  290 (444)
                      ||+.   .. ....+..+...+....|+|+|++|+....+   ..|.+|++.. +. ...+.. ...+..+.|+|+|+.|
T Consensus       319 ~d~~---g~-~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~-~~-~~~lt~-~~~~~~p~~spDG~~i  391 (435)
T PRK05137        319 MNAD---GS-NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDG-SG-ERILTS-GFLVEGPTWAPNGRVI  391 (435)
T ss_pred             EECC---CC-CeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCC-Cc-eEeccC-CCCCCCCeECCCCCEE
Confidence            8876   22 223333344456778999999999876543   3588888765 33 334432 2346778999999988


Q ss_pred             EEEECC------CcEEEEEcCCCce
Q psy8152         291 LSVSLD------RHFRVHDFHSKKL  309 (444)
Q Consensus       291 ~s~~~d------g~i~vw~~~~~~~  309 (444)
                      +..+.+      ..|+++++..+..
T Consensus       392 ~~~~~~~~~~~~~~L~~~dl~g~~~  416 (435)
T PRK05137        392 MFFRQTPGSGGAPKLYTVDLTGRNE  416 (435)
T ss_pred             EEEEccCCCCCcceEEEEECCCCce
Confidence            765543      2578888876554

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=4.7e-14  Score=132.94  Aligned_cols=229  Identities=9%  Similarity=0.032  Sum_probs=146.1

Q ss_pred             CeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEecC---CcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVKS---GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      ..|.+||...... ..+.  .+...+  ..++|+++.|+..+..   ..|++|++.+++... +..+.....+++|+|+|
T Consensus       184 ~~l~i~D~~g~~~-~~lt--~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG  259 (433)
T PRK04922        184 YALQVADSDGYNP-QTIL--RSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDG  259 (433)
T ss_pred             EEEEEECCCCCCc-eEee--cCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCC
Confidence            4688999864433 3333  334444  4568999998887643   469999998887653 44445556688999999


Q ss_pred             CEEE-EeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cce--EEE
Q psy8152         140 NIIA-TGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGY--VRV  213 (444)
Q Consensus       140 ~~l~-~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~--i~i  213 (444)
                      +.|+ +.+.+|  .|++||+.+++.. .+..+..                  .....+|+|++++|+.++. .+.  |++
T Consensus       260 ~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~------------------~~~~~~~spDG~~l~f~sd~~g~~~iy~  320 (433)
T PRK04922        260 RRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFG------------------IDTEPTWAPDGKSIYFTSDRGGRPQIYR  320 (433)
T ss_pred             CEEEEEEeCCCCceEEEEECCCCCeE-ECccCCC------------------CccceEECCCCCEEEEEECCCCCceEEE
Confidence            8776 444454  5999999877643 2332222                  2467899999988876653 444  666


Q ss_pred             EEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC---cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE
Q psy8152         214 YDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG---DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI  290 (444)
Q Consensus       214 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l  290 (444)
                      +++.   ... ...+..+......++|+|+|++|+..+.++   .|++|++.+ ++.. .+. +........|+|+|++|
T Consensus       321 ~dl~---~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~-g~~~-~Lt-~~~~~~~p~~spdG~~i  393 (433)
T PRK04922        321 VAAS---GGS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLST-GSVR-TLT-PGSLDESPSFAPNGSMV  393 (433)
T ss_pred             EECC---CCC-eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCC-CCeE-ECC-CCCCCCCceECCCCCEE
Confidence            6665   222 222222333445789999999998765433   599999987 6544 443 22244567999999988


Q ss_pred             EEEECC---CcEEEEEcCCCceEEEee-cCCceeEEEE
Q psy8152         291 LSVSLD---RHFRVHDFHSKKLLRKDY-MQSRLTSILV  324 (444)
Q Consensus       291 ~s~~~d---g~i~vw~~~~~~~~~~~~-~~~~i~~~~~  324 (444)
                      +..+.+   +.|+++++..+ ....+. +.+.+...+|
T Consensus       394 ~~~s~~~g~~~L~~~~~~g~-~~~~l~~~~g~~~~p~w  430 (433)
T PRK04922        394 LYATREGGRGVLAAVSTDGR-VRQRLVSADGEVREPAW  430 (433)
T ss_pred             EEEEecCCceEEEEEECCCC-ceEEcccCCCCCCCCcc
Confidence            776653   35788888544 333333 3344444443

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=1.2e-13  Score=130.24  Aligned_cols=233  Identities=10%  Similarity=0.042  Sum_probs=152.7

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc---CCeEEEEeCCCCccccceeeccccccEEEE
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS---GQKIKIYDTDFKNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~   93 (444)
                      .|.+++.....  .   +.+.  .|...+.+.+|+ |+++.|+..+.   +..|++|++.+++....... ........+
T Consensus       183 ~l~~~d~dg~~--~---~~lt--~~~~~v~~p~wS-pDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~-~g~~~~~~~  253 (435)
T PRK05137        183 RLAIMDQDGAN--V---RYLT--DGSSLVLTPRFS-PNRQEITYMSYANGRPRVYLLDLETGQRELVGNF-PGMTFAPRF  253 (435)
T ss_pred             EEEEECCCCCC--c---EEEe--cCCCCeEeeEEC-CCCCEEEEEEecCCCCEEEEEECCCCcEEEeecC-CCcccCcEE
Confidence            67777775444  1   2222  577899999999 79999887764   46899999988765433211 112223567


Q ss_pred             EeCCCeEE-EEecCCc--EEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-C--CeEEEEEcCCceeeeeeec
Q psy8152          94 SRYDECIL-TAVKSGD--VKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-E--NDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        94 s~~~~~l~-~~~~dg~--i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~vwd~~~~~~~~~~~~  167 (444)
                      +|+|+.|+ +.+.++.  |++|++.++.... +..+........|+|+++.|+..+. .  ..|++|++..+... .+..
T Consensus       254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~  331 (435)
T PRK05137        254 SPDGRKVVMSLSQGGNTDIYTMDLRSGTTTR-LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISF  331 (435)
T ss_pred             CCCCCEEEEEEecCCCceEEEEECCCCceEE-ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-Eeec
Confidence            89998765 4455554  7778888877653 5556666778999999998887764 3  36888887765433 2222


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC---ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ---GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      ...                  .+....|+|+|++|+....+   ..|.+|++.   .. ....+. ....+..+.|+|+|
T Consensus       332 ~~~------------------~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~---~~-~~~~lt-~~~~~~~p~~spDG  388 (435)
T PRK05137        332 GGG------------------RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD---GS-GERILT-SGFLVEGPTWAPNG  388 (435)
T ss_pred             CCC------------------cccCeEECCCCCEEEEEEcCCCceEEEEEECC---CC-ceEecc-CCCCCCCCeECCCC
Confidence            222                  35668899999988876543   368888876   22 122222 22346788999999


Q ss_pred             CEEEEEcCC------CcEEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         245 HYVIVGSTT------GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       245 ~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      ++|+..+.+      ..|+++++.. +. ...+. ..+.+...+|+|-
T Consensus       389 ~~i~~~~~~~~~~~~~~L~~~dl~g-~~-~~~l~-~~~~~~~p~Wsp~  433 (435)
T PRK05137        389 RVIMFFRQTPGSGGAPKLYTVDLTG-RN-EREVP-TPGDASDPAWSPL  433 (435)
T ss_pred             CEEEEEEccCCCCCcceEEEEECCC-Cc-eEEcc-CCCCccCcccCCC
Confidence            988765432      2578888765 43 34554 2445667788763

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=7.1e-14  Score=131.24  Aligned_cols=232  Identities=10%  Similarity=0.038  Sum_probs=142.4

Q ss_pred             CeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEecC---CcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVKS---GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      ..|.++|.. +.....+.  .+...+  .+++|+|+.|+..+..   ..|.+|++.+++... +......+.+.+|+|++
T Consensus       176 ~~L~~~D~d-G~~~~~l~--~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG  251 (427)
T PRK02889        176 YQLQISDAD-GQNAQSAL--SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDG  251 (427)
T ss_pred             cEEEEECCC-CCCceEec--cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC
Confidence            467777774 33333332  233334  4678999998877643   459999999887653 44445567789999999


Q ss_pred             CEEE-EeeCCCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEE
Q psy8152         140 NIIA-TGGKENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYD  215 (444)
Q Consensus       140 ~~l~-~~~~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d  215 (444)
                      +.|+ +.+.++...||.+  ..+. ...+..+..                  ......|+|+|+.|+..+. .+...+|.
T Consensus       252 ~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~------------------~~~~~~wSpDG~~l~f~s~~~g~~~Iy~  312 (427)
T PRK02889        252 RTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSG------------------IDTEPFFSPDGRSIYFTSDRGGAPQIYR  312 (427)
T ss_pred             CEEEEEEccCCCceEEEEECCCCC-cEECCCCCC------------------CCcCeEEcCCCCEEEEEecCCCCcEEEE
Confidence            8887 4567777666654  3333 333332222                  3566789999988776554 45666666


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC---cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG---DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      +.. .... ...+..........+|+|+|++|+..+..+   .|++||+.+ ++.. .+... .......|+|+++.|+.
T Consensus       313 ~~~-~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~-g~~~-~lt~~-~~~~~p~~spdg~~l~~  387 (427)
T PRK02889        313 MPA-SGGA-AQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT-GQVT-ALTDT-TRDESPSFAPNGRYILY  387 (427)
T ss_pred             EEC-CCCc-eEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC-CCeE-EccCC-CCccCceECCCCCEEEE
Confidence            541 1222 222222223345678999999998766554   599999987 6543 33322 23467899999998887


Q ss_pred             EECCC---cEEEEEcCCCceEEEee-cCCceeEEEEc
Q psy8152         293 VSLDR---HFRVHDFHSKKLLRKDY-MQSRLTSILVR  325 (444)
Q Consensus       293 ~~~dg---~i~vw~~~~~~~~~~~~-~~~~i~~~~~~  325 (444)
                      ++.++   .+++.++. +.....+. +.+.+...+|+
T Consensus       388 ~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ws  423 (427)
T PRK02889        388 ATQQGGRSVLAAVSSD-GRIKQRLSVQGGDVREPSWG  423 (427)
T ss_pred             EEecCCCEEEEEEECC-CCceEEeecCCCCCCCCccC
Confidence            77544   25555553 44444443 33444444443

>KOG2315|consensus

Probab=99.65  E-value=1.6e-13  Score=122.82  Aligned_cols=302  Identities=13%  Similarity=0.190  Sum_probs=203.7

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-----Ec-----CCeEEEEeCCC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-----YS-----GQKIKIYDTDF   74 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-----~~-----d~~i~vw~~~~   74 (444)
                      ++..+++-+.+..++|++......      .+..  -...++++.|+ |-+.+|.+=     ..     ...+++|++.+
T Consensus        44 ~~G~lfA~~~~~~v~i~~~~~~~~------~lt~--~~~~~~~L~fS-P~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet  114 (566)
T KOG2315|consen   44 NNGRLFAYSDNQVVKVFEIATLKV------VLCV--ELKKTYDLLFS-PKGNYLLTWEPWAIYGPKNASNPNVLVYNVET  114 (566)
T ss_pred             CCCcEEEEEcCCeEEEEEccCCcE------EEEe--ccceeeeeeec-ccccccccccccccccCCCCCCCceeeeeecc
Confidence            455666666677888888776642      1111  12278999999 788888761     11     24678999999


Q ss_pred             CccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEecc--CCEEEE-----eeC
Q psy8152          75 KNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH--SNIIAT-----GGK  147 (444)
Q Consensus        75 ~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~-----~~~  147 (444)
                      +.....++.....+++..|+.+..+.+- -..+.+++|++...+... ..-|...|+.+.++|.  ...+|+     .+.
T Consensus       115 ~~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGa  192 (566)
T KOG2315|consen  115 GVQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGA  192 (566)
T ss_pred             ceehhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCcccee-eeeeccceeeEEecCCCCCceEEEEccCCCCC
Confidence            7666666655556677777777655332 234589999988755442 4446788999999984  344543     455


Q ss_pred             CCeEEEEEcCCc---------------eeeeeeecccceee---------------------EeeeCCC--cccccCccc
Q psy8152         148 ENDLKLWDLNTT---------------KNIFSAKNVSHRVL---------------------VYSVKPD--EFDLRRPVW  189 (444)
Q Consensus       148 d~~i~vwd~~~~---------------~~~~~~~~~~~~~~---------------------~~~~~~~--~~~~~~~~~  189 (444)
                      -..|+||.+.-.               +....+......+.                     .+++..+  ...+...++
T Consensus       193 Pa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GP  272 (566)
T KOG2315|consen  193 PASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGP  272 (566)
T ss_pred             CcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCC
Confidence            678899877521               01111111111111                     1122211  235666788


Q ss_pred             eeEEEEecCCCEEEE--EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC---CCcEEEEEcCCC
Q psy8152         190 VNGISFLPNSDKVAV--CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST---TGDMMAVDLRGK  264 (444)
Q Consensus       190 i~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~  264 (444)
                      |.++.|+|+++.+++  |-+-.++.|||++    +.+++.+  ..++-+++-|+|.|++|+.++-   -|.|-|||+.+ 
T Consensus       273 Vhdv~W~~s~~EF~VvyGfMPAkvtifnlr----~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n-  345 (566)
T KOG2315|consen  273 VHDVTWSPSGREFAVVYGFMPAKVTIFNLR----GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN-  345 (566)
T ss_pred             ceEEEECCCCCEEEEEEecccceEEEEcCC----CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccc-
Confidence            999999999976654  4567899999998    7777655  4566789999999999888554   47899999999 


Q ss_pred             CcceeEeccccCceeEEEecCCCCEEEEEEC------CCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLNENLILSVSL------DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~------dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      .+++..+....  -+-+.|+|+|.+|++++.      |+.++||+.. |.++........+..+.|.+.
T Consensus       346 ~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f~sEL~qv~W~P~  411 (566)
T KOG2315|consen  346 RKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKMFKSELLQVEWRPF  411 (566)
T ss_pred             hhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-CceeehhhhhHhHhheeeeec
Confidence            99999988543  355799999999999875      6789999996 444444333336777777743

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=1.6e-13  Score=128.90  Aligned_cols=218  Identities=9%  Similarity=0.058  Sum_probs=143.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEE-EEecCCcEEEEE--
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECIL-TAVKSGDVKLWR--  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~-~~~~dg~i~iw~--  113 (444)
                      .+...+.+.+|+ |+++.|+..+..   ..|++|++.+++........+ ......++|+|+.|+ +.+.++...||.  
T Consensus       193 ~~~~~v~~p~wS-PDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d  270 (427)
T PRK02889        193 SSPEPIISPAWS-PDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKG-SNSAPAWSPDGRTLAVALSRDGNSQIYTVN  270 (427)
T ss_pred             cCCCCcccceEc-CCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCC-CccceEECCCCCEEEEEEccCCCceEEEEE
Confidence            567889999999 799999877643   469999999887644322222 223467899998876 456777766665  


Q ss_pred             cCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-ENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      +.++... .+..+........|+|+|+.|+..+. .+...+|.+  .++... .+.....                  ..
T Consensus       271 ~~~~~~~-~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~------------------~~  330 (427)
T PRK02889        271 ADGSGLR-RLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGS------------------YN  330 (427)
T ss_pred             CCCCCcE-ECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCC------------------Cc
Confidence            4444433 34455556677899999998886654 456666655  333321 1111111                  24


Q ss_pred             eEEEEecCCCEEEEEeCCc---eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC---cEEEEEcCCC
Q psy8152         191 NGISFLPNSDKVAVCSKQG---YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG---DMMAVDLRGK  264 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~  264 (444)
                      ...+|+|+|++|+..+..+   .|.+||+.   .... ..+... .......|+|+|++|+..+.++   .+++.++ . 
T Consensus       331 ~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~---~g~~-~~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~-  403 (427)
T PRK02889        331 TSPRISPDGKLLAYISRVGGAFKLYVQDLA---TGQV-TALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSS-D-  403 (427)
T ss_pred             CceEECCCCCEEEEEEccCCcEEEEEEECC---CCCe-EEccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEEC-C-
Confidence            4578999999998776554   69999988   3322 222222 2346789999999988866544   3566666 3 


Q ss_pred             CcceeEeccccCceeEEEecCC
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      +.....+..+.+.+...+|+|-
T Consensus       404 g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        404 GRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             CCceEEeecCCCCCCCCccCCC
Confidence            6666667666677888889874

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.63  E-value=8.8e-12  Score=106.48  Aligned_cols=299  Identities=11%  Similarity=0.112  Sum_probs=194.6

Q ss_pred             ccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCC--Ccc
Q psy8152           7 YNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDF--KNF   77 (444)
Q Consensus         7 ~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~--~~~   77 (444)
                      ..+++|+.    ..-|++|++.+....   +..++...+...++-|+|+ +++++|+++-.+   |.|..|.+..  |++
T Consensus         3 ~~~YiGtyT~~~s~gI~v~~ld~~~g~---l~~~~~v~~~~nptyl~~~-~~~~~LY~v~~~~~~ggvaay~iD~~~G~L   78 (346)
T COG2706           3 QTVYIGTYTKRESQGIYVFNLDTKTGE---LSLLQLVAELGNPTYLAVN-PDQRHLYVVNEPGEEGGVAAYRIDPDDGRL   78 (346)
T ss_pred             eEEEEeeecccCCCceEEEEEeCcccc---cchhhhccccCCCceEEEC-CCCCEEEEEEecCCcCcEEEEEEcCCCCeE
Confidence            34555654    478999999855432   2333444678899999999 789899987654   7788887764  443


Q ss_pred             c--cceeeccccccEEEEEeCCCeEEEEec-CCcEEEEEcCC-CCccc--cccccCCC----------eEEEEEeccCCE
Q psy8152          78 N--TNTDVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYKT-EPDQW--TNFNVGPQ----------LECMKHNKHSNI  141 (444)
Q Consensus        78 ~--~~~~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~  141 (444)
                      .  ......++...-.++++++++++++.. .|.|.++-++. |....  ....|.+.          +.+..|.|++++
T Consensus        79 t~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~  158 (346)
T COG2706          79 TFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRY  158 (346)
T ss_pred             EEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCE
Confidence            3  233333444456778899999998876 58899999865 33221  23345544          889999999999


Q ss_pred             EEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCC
Q psy8152         142 IATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKIT  219 (444)
Q Consensus       142 l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~  219 (444)
                      |++... --.|.+|++..++....-...-               ......+.|.|+|++++..+.++ +++|.+|.....
T Consensus       159 l~v~DLG~Dri~~y~~~dg~L~~~~~~~v---------------~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~  223 (346)
T COG2706         159 LVVPDLGTDRIFLYDLDDGKLTPADPAEV---------------KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA  223 (346)
T ss_pred             EEEeecCCceEEEEEcccCcccccccccc---------------CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC
Confidence            988753 2469999998765432111000               01124789999999988765554 899999999811


Q ss_pred             -CCccceEEEe------CCCCCeeEEEEccCCCEEEEEcC-CCcEEEEEcCCCCcceeEec---cccCceeEEEecCCCC
Q psy8152         220 -TQRRPVLKVD------IPDVALSCITTTNQSHYVIVGST-TGDMMAVDLRGKGKPCYKYK---GFAGCVKDIACPLNEN  288 (444)
Q Consensus       220 -~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~s~~~~  288 (444)
                       +....++.+.      ........|.++|+|++|+++.. ...|.+|.+...+..+..+.   .+...-+.+.|+|.++
T Consensus       224 ~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~  303 (346)
T COG2706         224 VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGR  303 (346)
T ss_pred             CceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCC
Confidence             1122222221      12345678899999999998643 23688888776333333332   3444568889999999


Q ss_pred             EEEEEECC-CcEEEEEcCC--CceEEEee--cCCceeEEEE
Q psy8152         289 LILSVSLD-RHFRVHDFHS--KKLLRKDY--MQSRLTSILV  324 (444)
Q Consensus       289 ~l~s~~~d-g~i~vw~~~~--~~~~~~~~--~~~~i~~~~~  324 (444)
                      +|+++..+ ..|.+|.+..  |++-....  ......|+.|
T Consensus       304 ~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f  344 (346)
T COG2706         304 FLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKF  344 (346)
T ss_pred             EEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEE
Confidence            99988865 4688887654  55433222  3344456655

>KOG0974|consensus

Probab=99.63  E-value=3.2e-14  Score=135.92  Aligned_cols=281  Identities=14%  Similarity=0.041  Sum_probs=195.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE----EeCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV----SRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~----s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      .|-+++++..+-   .++|++|+. ..|.+|++..+..+..+.. .+...+...    .-.+.+++++..-+.+..=...
T Consensus         5 s~~~~l~~~~~~---~~~llag~g-p~i~~yd~~s~~li~~~~~-~~~~~~H~~e~~~~l~~~~~v~~~~~~~v~~~~~~   79 (967)
T KOG0974|consen    5 SSLGPLNLPQLV---SDYLLAGSG-PEILVYDLSSGCLIRHLIQ-SKILEVHRGEGKVKLLSGKIVTCAKSDEVYVKEAS   79 (967)
T ss_pred             cccccccchhhc---cceeeecCC-CceEEeeCCchhHhhhhhh-hcccccccccccceeccceEEEEEeecceeecchh
Confidence            345666777776   277777765 6899999998877665431 111111111    1123456666555555443322


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      ...    .......|....+......++.++.++.+.+||...+..+..+...... ..+             ...-+.+
T Consensus        80 ~~~----~~~~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~-~l~-------------~~~~~g~  141 (967)
T KOG0974|consen   80 NQI----IERFSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERC-TLY-------------SSLIIGD  141 (967)
T ss_pred             hhh----hhhccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceE-EEE-------------eEEEEec
Confidence            111    1222334444555557788999999999999999887766555433320 000             1222334


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee-Eeccc
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY-KYKGF  274 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~h  274 (444)
                      +++.-++++|+.-+.|.+|+..  ....++ .+.+|.+.|.++.|+.+|+++++.+.|.++|+|++.+ .+.+. ..-+|
T Consensus       142 s~~~~~i~~gsv~~~iivW~~~--~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s-~~~~~~~~fgH  217 (967)
T KOG0974|consen  142 SAEELYIASGSVFGEIIVWKPH--EDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDS-REVLGCTGFGH  217 (967)
T ss_pred             cCcEEEEEeccccccEEEEecc--ccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeeccc-ccccCcccccc
Confidence            5666789999999999999998  344444 6789999999999999999999999999999999999 66555 66689


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-c-CCceeEEEEcCCCcccccchhhhhccccccCCCcccc
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-M-QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKY  352 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W  352 (444)
                      +..|..+.|.|+  ++++++.|-+.++|......+. .+. | ...|+.++....         ...++|++.|+.+++|
T Consensus       218 saRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l~-~y~~h~g~~iw~~~~~~~---------~~~~vT~g~Ds~lk~~  285 (967)
T KOG0974|consen  218 SARVWACCFLPN--RIITVGEDCTCRVWGVNGTQLE-VYDEHSGKGIWKIAVPIG---------VIIKVTGGNDSTLKLW  285 (967)
T ss_pred             cceeEEEEeccc--eeEEeccceEEEEEecccceeh-hhhhhhhcceeEEEEcCC---------ceEEEeeccCcchhhh
Confidence            999999999998  8999999999999976654443 332 4 345888887654         3578999999999999


Q ss_pred             CCCcccc
Q psy8152         353 DPEHFEM  359 (444)
Q Consensus       353 ~~~~~~~  359 (444)
                      ++.+...
T Consensus       286 ~l~~r~~  292 (967)
T KOG0974|consen  286 DLNGRGL  292 (967)
T ss_pred             hhhcccc
Confidence            9886443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.61  E-value=1.1e-13  Score=114.44  Aligned_cols=137  Identities=16%  Similarity=0.280  Sum_probs=99.5

Q ss_pred             CcEEEEEcC--CCCccccccccCCCeEEEEEeccCCEEEEe--eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152         107 GDVKLWRYK--TEPDQWTNFNVGPQLECMKHNKHSNIIATG--GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       107 g~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      +...+|.++  ............++|.+++|+|+++.||+.  ..++.|.+||++ ++.+..+.  ..            
T Consensus        37 ~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~------------  101 (194)
T PF08662_consen   37 GEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQ------------  101 (194)
T ss_pred             eeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CC------------
Confidence            345555553  322221223345679999999999887654  456799999997 66666654  22            


Q ss_pred             cccCccceeEEEEecCCCEEEEEeC---CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC------C
Q psy8152         183 DLRRPVWVNGISFLPNSDKVAVCSK---QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST------T  253 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d  253 (444)
                            .++.|.|+|+|++|++++.   .|.|.+||++   ..+.+.++. | ..++.++|+|+|++|+++..      |
T Consensus       102 ------~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~---~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~r~~~d  170 (194)
T PF08662_consen  102 ------PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR---KKKKISTFE-H-SDATDVEWSPDGRYLATATTSPRLRVD  170 (194)
T ss_pred             ------CceEEEECCCCCEEEEEEccCCCcEEEEEECC---CCEEeeccc-c-CcEEEEEEcCCCCEEEEEEeccceecc
Confidence                  4788999999999998864   4679999999   777776654 3 34789999999999999764      6


Q ss_pred             CcEEEEEcCCCCcceeEe
Q psy8152         254 GDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       254 g~i~iwd~~~~~~~~~~~  271 (444)
                      +.++||+..  |+++...
T Consensus       171 ng~~Iw~~~--G~~l~~~  186 (194)
T PF08662_consen  171 NGFKIWSFQ--GRLLYKK  186 (194)
T ss_pred             ccEEEEEec--CeEeEec
Confidence            789999985  6666554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.60  E-value=3.5e-11  Score=107.04  Aligned_cols=282  Identities=10%  Similarity=0.039  Sum_probs=175.3

Q ss_pred             CcccEEEecCC-----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----------CCeEEE
Q psy8152           5 DDYNIYIGSST-----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----------GQKIKI   69 (444)
Q Consensus         5 ~~~~l~~g~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----------d~~i~v   69 (444)
                      +..++++....     +.|.++|..+.+. .   ..+.. +...  ..+ ++ |+++.|+++..          +..|.+
T Consensus        11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v-~---g~i~~-G~~P--~~~-~s-pDg~~lyva~~~~~R~~~G~~~d~V~v   81 (352)
T TIGR02658        11 DARRVYVLDPGHFAATTQVYTIDGEAGRV-L---GMTDG-GFLP--NPV-VA-SDGSFFAHASTVYSRIARGKRTDYVEV   81 (352)
T ss_pred             CCCEEEEECCcccccCceEEEEECCCCEE-E---EEEEc-cCCC--cee-EC-CCCCEEEEEeccccccccCCCCCEEEE
Confidence            44556666554     8999999988774 1   22221 2111  224 88 78988887766          689999


Q ss_pred             EeCCCCccccceeeccc-------cccEEEEEeCCCeEEEEe-c-CCcEEEEEcCCCCccccccccCCCeEEEEEeccCC
Q psy8152          70 YDTDFKNFNTNTDVSFG-------EGDIVGVSRYDECILTAV-K-SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        70 w~~~~~~~~~~~~~~~~-------~~~v~~~s~~~~~l~~~~-~-dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  140 (444)
                      ||..+.+.+..+.....       .....+++|+|++|++.. . +..|.+.|+.+++.+..+ .-.....-...++.. 
T Consensus        82 ~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei-~vp~~~~vy~t~e~~-  159 (352)
T TIGR02658        82 IDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMM-DVPDCYHIFPTANDT-  159 (352)
T ss_pred             EECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEE-eCCCCcEEEEecCCc-
Confidence            99999999988865321       223678899999988776 3 689999999999887522 222222222222222 


Q ss_pred             EEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCC
Q psy8152         141 IIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKI  218 (444)
Q Consensus       141 ~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~  218 (444)
                      .+ +-+.||......+.. ++....-.        .-|.++. +.-...+    .|.+ +++++.+... |+|.+.|+..
T Consensus       160 ~~-~~~~Dg~~~~v~~d~~g~~~~~~~--------~vf~~~~-~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~  224 (352)
T TIGR02658       160 FF-MHCRDGSLAKVGYGTKGNPKIKPT--------EVFHPED-EYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSS  224 (352)
T ss_pred             cE-EEeecCceEEEEecCCCceEEeee--------eeecCCc-cccccCC----ceEcCCCcEEEEecC-CeEEEEecCC
Confidence            22 223345544443333 22110000        0001100 0000001    3455 7777777666 9999999651


Q ss_pred             C--CCccceEEEeC-------CCCCeeEEEEccCCCEEEEEc----------CCCcEEEEEcCCCCcceeEeccccCcee
Q psy8152         219 T--TQRRPVLKVDI-------PDVALSCITTTNQSHYVIVGS----------TTGDMMAVDLRGKGKPCYKYKGFAGCVK  279 (444)
Q Consensus       219 ~--~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~h~~~i~  279 (444)
                      .  ....++..+..       ....+.-++++|+++.+++..          ..+.|.++|..+ ++.+..+.. ...+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t-~kvi~~i~v-G~~~~  302 (352)
T TIGR02658       225 GDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKT-GKRLRKIEL-GHEID  302 (352)
T ss_pred             CcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCC-CeEEEEEeC-CCcee
Confidence            0  02222222211       122334599999999888742          224799999999 999988873 45788


Q ss_pred             EEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEee
Q psy8152         280 DIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       280 ~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .++++|+++ +|++.. .++.|.++|..+++.+.++.
T Consensus       303 ~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~  339 (352)
T TIGR02658       303 SINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN  339 (352)
T ss_pred             eEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence            999999999 887666 67889999999999999874

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1354|consensus

Probab=99.59  E-value=2.8e-13  Score=114.07  Aligned_cols=251  Identities=15%  Similarity=0.251  Sum_probs=170.3

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cccceeecccc------------ccEEEEE--e--CCCe
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FNTNTDVSFGE------------GDIVGVS--R--YDEC   99 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~------------~~v~~~s--~--~~~~   99 (444)
                      ...-|.++.|. ..|.+|++|..+|.|.++.-....     ....++  .|.            ..|..+.  +  +...
T Consensus        24 eadiis~vef~-~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fq--shepEFDYLkSleieEKinkIrw~~~~n~a~  100 (433)
T KOG1354|consen   24 EADIISAVEFD-HYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQ--SHEPEFDYLKSLEIEEKINKIRWLDDGNLAE  100 (433)
T ss_pred             hhcceeeEEee-cccceEeecCCCCeEEEeecccccccceeeeeeee--ccCcccchhhhhhhhhhhhhceecCCCCccE
Confidence            45778999999 799999999999999999754322     112222  221            1222332  2  2345


Q ss_pred             EEEEecCCcEEEEEcCCCCcc-----------------------------------c-cccccCCCeEEEEEeccCCEEE
Q psy8152         100 ILTAVKSGDVKLWRYKTEPDQ-----------------------------------W-TNFNVGPQLECMKHNKHSNIIA  143 (444)
Q Consensus       100 l~~~~~dg~i~iw~~~~~~~~-----------------------------------~-~~~~~~~~v~~~~~~~~~~~l~  143 (444)
                      ++..+.|.+|++|.+......                                   + .-..|...|+++.++.+...++
T Consensus       101 FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~l  180 (433)
T KOG1354|consen  101 FLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFL  180 (433)
T ss_pred             EEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEe
Confidence            777889999999987532110                                   0 1123677889999999888888


Q ss_pred             EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCc
Q psy8152         144 TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQR  222 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~  222 (444)
                      ++. |=.|.+|++.-....+.         .+.+.|..+.... .-|++..|+|.. +.|+-.+..|+|++.|++   +.
T Consensus       181 SAD-dLRINLWnlei~d~sFn---------IVDIKP~nmEeLt-eVITsaEFhp~~cn~f~YSSSKGtIrLcDmR---~~  246 (433)
T KOG1354|consen  181 SAD-DLRINLWNLEIIDQSFN---------IVDIKPANMEELT-EVITSAEFHPHHCNVFVYSSSKGTIRLCDMR---QS  246 (433)
T ss_pred             ecc-ceeeeeccccccCCcee---------EEEccccCHHHHH-HHHhhhccCHhHccEEEEecCCCcEEEeech---hh
Confidence            765 67899999875332222         2222232221111 138899999987 788888999999999999   22


Q ss_pred             cce------EE----------EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC----------
Q psy8152         223 RPV------LK----------VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG----------  276 (444)
Q Consensus       223 ~~~------~~----------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~----------  276 (444)
                      ...      ..          |..--..|..+.|++.|+||++-.. -+|++||+....+++.+++.|..          
T Consensus       247 aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYE  325 (433)
T KOG1354|consen  247 ALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYE  325 (433)
T ss_pred             hhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhh
Confidence            111      11          0111245788999999999997643 47999999654788888876641          


Q ss_pred             --ce---eEEEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         277 --CV---KDIACPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       277 --~i---~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                        .|   ..++|+.++.++++|+....+++|++..|..
T Consensus       326 nD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk  363 (433)
T KOG1354|consen  326 NDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSK  363 (433)
T ss_pred             ccchhheeEEEEcCCcceEecccccceEEEecCCCCcc
Confidence              22   3568998889999999999999999776654

>KOG1409|consensus

Probab=99.58  E-value=6.4e-13  Score=112.00  Aligned_cols=225  Identities=8%  Similarity=0.069  Sum_probs=158.5

Q ss_pred             ccEEEecCCCcEEEEEcCC-CccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC----CCccccce
Q psy8152           7 YNIYIGSSTGAFKGVNLSK-DKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD----FKNFNTNT   81 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~----~~~~~~~~   81 (444)
                      .-+++.+.|.+++||--.. ++.    ...+.. .-..+++++.+. +....|++|-..|++.-+.+.    .....+..
T Consensus        37 ~gv~~~s~drtvrv~lkrds~q~----wpsI~~-~mP~~~~~~~y~-~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~  110 (404)
T KOG1409|consen   37 EGVISVSEDRTVRVWLKRDSGQY----WPSIYH-YMPSPCSAMEYV-SESRRLYVGQDNGTVTEFALSEDFNKMTFLKDY  110 (404)
T ss_pred             CCeEEccccceeeeEEecccccc----Cchhhh-hCCCCceEeeee-ccceEEEEEEecceEEEEEhhhhhhhcchhhhh
Confidence            4578899999999996433 332    222221 346889999999 788899999999999988764    23333333


Q ss_pred             eeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-
Q psy8152          82 DVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-  158 (444)
Q Consensus        82 ~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-  158 (444)
                        ..|..++.++-  -....+++.+.|..+.---.+.+..+..+. .....+++.+.-.  +.+.|...|.|.+..+.. 
T Consensus       111 --~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~-~~~~~t~~~~d~~--~~fvGd~~gqvt~lr~~~~  185 (404)
T KOG1409|consen  111 --LAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYN-FETPASALQFDAL--YAFVGDHSGQITMLKLEQN  185 (404)
T ss_pred             --hhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceE-eeccCCCCceeeE--EEEecccccceEEEEEeec
Confidence              36777887763  345678888888766544445554443111 1111122222111  555666667766655443 


Q ss_pred             -ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         159 -TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                       -.++.++.+|..                  .+++++|.|...+|++|..|..+.+||+.  ........+.+|...|..
T Consensus       186 ~~~~i~~~~~h~~------------------~~~~l~Wd~~~~~LfSg~~d~~vi~wdig--g~~g~~~el~gh~~kV~~  245 (404)
T KOG1409|consen  186 GCQLITTFNGHTG------------------EVTCLKWDPGQRLLFSGASDHSVIMWDIG--GRKGTAYELQGHNDKVQA  245 (404)
T ss_pred             CCceEEEEcCccc------------------ceEEEEEcCCCcEEEeccccCceEEEecc--CCcceeeeeccchhhhhh
Confidence             556777777777                  89999999999999999999999999998  445556677889999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                      +...+--+.+++++.||.|.+|++.
T Consensus       246 l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  246 LSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             hhhhhhheeeeeccCCCeEEEEecc
Confidence            9888888899999999999999986

>KOG2315|consensus

Probab=99.57  E-value=2.8e-12  Score=114.99  Aligned_cols=319  Identities=13%  Similarity=0.091  Sum_probs=195.0

Q ss_pred             cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG   92 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~   92 (444)
                      ...-.+.+|...........+....   -..+++..+++ +++.+++.+.. ..++|++..++..+....  .....-..
T Consensus         8 RsSe~~~l~~~~~~~~~~~~f~~~~---~~~~~~v~~~S-~~G~lfA~~~~-~~v~i~~~~~~~~~lt~~--~~~~~~L~   80 (566)
T KOG2315|consen    8 RSSEGFYLFNGPGSKDAVTVFEQNK---TSRPCNVFAYS-NNGRLFAYSDN-QVVKVFEIATLKVVLCVE--LKKTYDLL   80 (566)
T ss_pred             EccceeEEeccCCccccccccccCC---CCCcceeEEEc-CCCcEEEEEcC-CeEEEEEccCCcEEEEec--cceeeeee
Confidence            3344678888655433211121111   13346777888 66766666554 799999988876443332  11333344


Q ss_pred             EEeCCCeEEEEe----------cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          93 VSRYDECILTAV----------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        93 ~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      ++|-+.+|.+--          ....+++|++.++.....+......-++..|+++..+.|-- ..+.+++|++...+.+
T Consensus        81 fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arl-v~nev~f~~~~~f~~~  159 (566)
T KOG2315|consen   81 FSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARL-VSNEVQFYDLGSFKTI  159 (566)
T ss_pred             ecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhh-hcceEEEEecCCccce
Confidence            588888876621          12457899999855443333322222688898876554432 2467999998773322


Q ss_pred             eeeecccceeeEeeeCCCcc--------------c-----------ccC---------ccceeEEEEecCCC-EEEEEe-
Q psy8152         163 FSAKNVSHRVLVYSVKPDEF--------------D-----------LRR---------PVWVNGISFLPNSD-KVAVCS-  206 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~--------------~-----------~~~---------~~~i~~~~~~~~~~-~l~~~~-  206 (444)
                      . -+.+...+..+.++|...              .           ..+         ...=-.+.|++-|. +|+.++ 
T Consensus       160 ~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLast  238 (566)
T KOG2315|consen  160 Q-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLAST  238 (566)
T ss_pred             e-eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEE
Confidence            1 122233444444444310              0           000         00122456666663 232222 


Q ss_pred             -CC---------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE--EcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         207 -KQ---------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV--GSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       207 -~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                       .|         .+++++++.   .......+ ...++|.++.|+|+++-+++  |-.--.+.|||++  +.++..|.  
T Consensus       239 dVDktn~SYYGEq~Lyll~t~---g~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr--~~~v~df~--  310 (566)
T KOG2315|consen  239 DVDKTNASYYGEQTLYLLATQ---GESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR--GKPVFDFP--  310 (566)
T ss_pred             eecCCCccccccceEEEEEec---CceEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC--CCEeEeCC--
Confidence             22         356777766   33333333 24789999999999977665  7778889999998  68888886  


Q ss_pred             cCceeEEEecCCCCEEEEEECC---CcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccc------c
Q psy8152         275 AGCVKDIACPLNENLILSVSLD---RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEE------K  345 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~d---g~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~------~  345 (444)
                      .++=+++-|+|.|++|+.+|.+   |.|-|||+.+.+++.++..... +-..|+         |++.+++|+.      .
T Consensus       311 egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t-t~~eW~---------PdGe~flTATTaPRlrv  380 (566)
T KOG2315|consen  311 EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANT-TVFEWS---------PDGEYFLTATTAPRLRV  380 (566)
T ss_pred             CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCc-eEEEEc---------CCCcEEEEEeccccEEe
Confidence            4566888999999999988864   7899999999988887665444 334444         5567777665      4


Q ss_pred             CCCccccCCCccc
Q psy8152         346 GDSDEKYDPEHFE  358 (444)
Q Consensus       346 d~~i~~W~~~~~~  358 (444)
                      |+.++||+..+..
T Consensus       381 dNg~KiwhytG~~  393 (566)
T KOG2315|consen  381 DNGIKIWHYTGSL  393 (566)
T ss_pred             cCCeEEEEecCce
Confidence            7889999987643

>KOG1354|consensus

Probab=99.57  E-value=3.3e-13  Score=113.69  Aligned_cols=248  Identities=13%  Similarity=0.165  Sum_probs=162.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCcc-ceeeeeee----------cccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEe
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKC-IIKNIQNV----------KYITNKASVLALNWGNV-EESELLIAYSGQKIKIYD   71 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~-~~~~~~~~----------~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~   71 (444)
                      ..+.+|++|..+|.|-++.-..... ........          +.+.-...|..+.|.++ +...++..+.|.+|++|.
T Consensus        35 ~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiKlWK  114 (433)
T KOG1354|consen   35 HYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWK  114 (433)
T ss_pred             cccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcceeeee
Confidence            3578999999999999997543321 01111111          11233467899999842 335677888899999998


Q ss_pred             CCCCcccc---------------c-------------------eeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcC
Q psy8152          72 TDFKNFNT---------------N-------------------TDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        72 ~~~~~~~~---------------~-------------------~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +.......               .                   .-.++|...|.++|.  +...++++ .|-.|.+|++.
T Consensus       115 i~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-DdLRINLWnle  193 (433)
T KOG1354|consen  115 IRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DDLRINLWNLE  193 (433)
T ss_pred             eeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-cceeeeecccc
Confidence            75322111               0                   012456666777764  44556654 67789999986


Q ss_pred             CCCccc---cccc-----cCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCcee------eeeeecccceeeEeeeCCC
Q psy8152         116 TEPDQW---TNFN-----VGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN------IFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       116 ~~~~~~---~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~------~~~~~~~~~~~~~~~~~~~  180 (444)
                      -.....   -+.+     ...-|++..|+| ..+.|+..+..|+|++.|++....      ++..+..+.        +.
T Consensus       194 i~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~--------~r  265 (433)
T KOG1354|consen  194 IIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS--------SR  265 (433)
T ss_pred             ccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc--------ch
Confidence            432211   1111     234588999999 778889899999999999996321      111111100        01


Q ss_pred             cccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC---------------CeeEEEEccCCC
Q psy8152         181 EFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV---------------ALSCITTTNQSH  245 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---------------~i~~~~~~~~~~  245 (444)
                      ++....-..|..+.|++.|+++++-.. -+|++||+.  ...+++.+++.|..               .-..++|+.++.
T Consensus       266 sffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~n--me~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~  342 (433)
T KOG1354|consen  266 SFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLN--MEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDS  342 (433)
T ss_pred             hhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEecc--ccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcc
Confidence            111222235889999999999997544 589999997  57778887776632               124578998889


Q ss_pred             EEEEEcCCCcEEEEEcCC
Q psy8152         246 YVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~  263 (444)
                      ++++|+..+.+++|++..
T Consensus       343 ~v~TGsy~n~frvf~~~~  360 (433)
T KOG1354|consen  343 YVMTGSYNNVFRVFNLAR  360 (433)
T ss_pred             eEecccccceEEEecCCC
Confidence            999999999999999654

>KOG1832|consensus

Probab=99.55  E-value=7.5e-15  Score=137.66  Aligned_cols=191  Identities=12%  Similarity=0.098  Sum_probs=138.3

Q ss_pred             cccccEE--EEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC--eEEEEEcCC-c
Q psy8152          85 FGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN--DLKLWDLNT-T  159 (444)
Q Consensus        85 ~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~-~  159 (444)
                      .|....+  +|+...++|+.|+..|.|++|++.+|........|+.+|+.+.=+.+|..+++.+.-.  ...+|++.. +
T Consensus      1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~ 1178 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG 1178 (1516)
T ss_pred             ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccccc
Confidence            4444444  4566778999999999999999999998888889999999998888888877665433  467899875 4


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe----CCCCCe
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD----IPDVAL  235 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~~~~i  235 (444)
                      .+.+++.                      .-.++.|+...+.-+.|+.-..+.+||+.   ++.++.++.    +....-
T Consensus      1179 ~~~Hsf~----------------------ed~~vkFsn~~q~r~~gt~~d~a~~YDvq---T~~~l~tylt~~~~~~y~~ 1233 (1516)
T KOG1832|consen 1179 GPRHSFD----------------------EDKAVKFSNSLQFRALGTEADDALLYDVQ---TCSPLQTYLTDTVTSSYSN 1233 (1516)
T ss_pred             Ccccccc----------------------ccceeehhhhHHHHHhcccccceEEEecc---cCcHHHHhcCcchhhhhhc
Confidence            4444443                      24568888765555556666789999999   555555522    223334


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      ++..|+|+..+|+-   ||  .+||++. ...++.|...+..+ .-.|+|.|..++..+.     |||+++.++++.
T Consensus      1234 n~a~FsP~D~LIln---dG--vLWDvR~-~~aIh~FD~ft~~~-~G~FHP~g~eVIINSE-----IwD~RTF~lLh~ 1298 (1516)
T KOG1832|consen 1234 NLAHFSPCDTLILN---DG--VLWDVRI-PEAIHRFDQFTDYG-GGGFHPSGNEVIINSE-----IWDMRTFKLLHS 1298 (1516)
T ss_pred             cccccCCCcceEee---Cc--eeeeecc-HHHHhhhhhheecc-cccccCCCceEEeech-----hhhhHHHHHHhc
Confidence            78899999887763   44  5899999 78888887554332 2369999998887654     899988765544

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=5.6e-12  Score=117.86  Aligned_cols=241  Identities=11%  Similarity=0.019  Sum_probs=145.1

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCe--E-EEEecC--CcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC--I-LTAVKS--GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~--l-~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      ..|.+.|...+.... +........-..++|+|+.  + ++...+  ..|.+.++.+++... +....+.....+|+|+|
T Consensus       165 ~~l~~~d~dG~~~~~-lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG  242 (428)
T PRK01029        165 GELWSVDYDGQNLRP-LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRK  242 (428)
T ss_pred             ceEEEEcCCCCCceE-cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCC
Confidence            367777776554433 2212222233578999875  2 233333  358888888877653 44455566678999999


Q ss_pred             CEEEEeeC-----CCeEEEEEcCCc---eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCce
Q psy8152         140 NIIATGGK-----ENDLKLWDLNTT---KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGY  210 (444)
Q Consensus       140 ~~l~~~~~-----d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~  210 (444)
                      +.|+..+.     +-.+.+|++..+   ...........                  .....+|+|+|+.|+..+ .+|.
T Consensus       243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~------------------~~~~p~wSPDG~~Laf~s~~~g~  304 (428)
T PRK01029        243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFG------------------TQGNPSFSPDGTRLVFVSNKDGR  304 (428)
T ss_pred             CEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCC------------------CcCCeEECCCCCEEEEEECCCCC
Confidence            98887553     223444666542   22211111111                  245679999998777655 4665


Q ss_pred             EEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         211 VRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       211 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      ..+|.+...........+..+...+....|+|+|++|+..+..   ..|++||+.+ ++.. .+......+....|+|+|
T Consensus       305 ~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~-g~~~-~Lt~~~~~~~~p~wSpDG  382 (428)
T PRK01029        305 PRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT-GRDY-QLTTSPENKESPSWAIDS  382 (428)
T ss_pred             ceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC-CCeE-EccCCCCCccceEECCCC
Confidence            5555443101122233444444567789999999988875443   3699999987 6543 343333456788999999


Q ss_pred             CEEEEEEC---CCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         288 NLILSVSL---DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       288 ~~l~s~~~---dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      +.|+..+.   ...|++|++.+++........+.+...+|++.
T Consensus       383 ~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~  425 (428)
T PRK01029        383 LHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAF  425 (428)
T ss_pred             CEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCC
Confidence            97775443   35688999988776444444445555566544

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.55  E-value=3.7e-12  Score=120.35  Aligned_cols=231  Identities=12%  Similarity=0.066  Sum_probs=147.8

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEE
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~   93 (444)
                      .|.+++......     +.+.  .+...+...+|+ |++++|+.++..   ..|++|++.+++........+ .....++
T Consensus       171 ~l~~~d~~g~~~-----~~l~--~~~~~~~~p~~S-pdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~-~~~~~~~  241 (417)
T TIGR02800       171 ELQVADYDGANP-----QTIT--RSREPILSPAWS-PDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPG-MNGAPAF  241 (417)
T ss_pred             eEEEEcCCCCCC-----EEee--cCCCceecccCC-CCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCC-CccceEE
Confidence            577777654331     2222  456678899999 799999887654   479999998876544332211 2233567


Q ss_pred             EeCCCeEEE-EecCC--cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC-C--eEEEEEcCCceeeeeeec
Q psy8152          94 SRYDECILT-AVKSG--DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE-N--DLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        94 s~~~~~l~~-~~~dg--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~vwd~~~~~~~~~~~~  167 (444)
                      +|+++.|+. .+.++  .|++|++.++.... +..+........|+|+++.|+..+.. +  .|.++++.+++.. .+..
T Consensus       242 spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~  319 (417)
T TIGR02800       242 SPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTF  319 (417)
T ss_pred             CCCCCEEEEEECCCCCccEEEEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Eeec
Confidence            899987664 44443  58889988776553 44555556678999999988766543 3  5777887765532 2222


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc---eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG---YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      ...                  .+..+.|+|++++|+.++.++   .|.+||+.   .. ....+... .......|+|++
T Consensus       320 ~~~------------------~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~---~~-~~~~l~~~-~~~~~p~~spdg  376 (417)
T TIGR02800       320 RGG------------------YNASPSWSPDGDLIAFVHREGGGFNIAVMDLD---GG-GERVLTDT-GLDESPSFAPNG  376 (417)
T ss_pred             CCC------------------CccCeEECCCCCEEEEEEccCCceEEEEEeCC---CC-CeEEccCC-CCCCCceECCCC
Confidence            222                  467789999999998887765   78899988   22 22222222 234566899999


Q ss_pred             CEEEEEcCCC---cEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152         245 HYVIVGSTTG---DMMAVDLRGKGKPCYKYKGFAGCVKDIAC  283 (444)
Q Consensus       245 ~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~h~~~i~~~~~  283 (444)
                      ++|+..+.++   .+++.+..  +.....+..+.+.+..++|
T Consensus       377 ~~l~~~~~~~~~~~l~~~~~~--g~~~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       377 RMILYATTRGGRGVLGLVSTD--GRFRARLPLGNGDVREPAW  416 (417)
T ss_pred             CEEEEEEeCCCcEEEEEEECC--CceeeECCCCCCCcCCCCC
Confidence            9888866654   35555543  5555555544445555554

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0974|consensus

Probab=99.54  E-value=8e-13  Score=126.58  Aligned_cols=261  Identities=10%  Similarity=0.089  Sum_probs=180.5

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      +|++ +.--.|.+|++..+... ..+..++.. .|...=.--.    .+.+++++..-+-+..=... .+....+     
T Consensus        19 ~lla-g~gp~i~~yd~~s~~li-~~~~~~~~~~~H~~e~~~~l----~~~~~v~~~~~~~v~~~~~~-~~~~~~~-----   86 (967)
T KOG0974|consen   19 YLLA-GSGPEILVYDLSSGCLI-RHLIQSKILEVHRGEGKVKL----LSGKIVTCAKSDEVYVKEAS-NQIIERF-----   86 (967)
T ss_pred             eeee-cCCCceEEeeCCchhHh-hhhhhhccccccccccccee----ccceEEEEEeecceeecchh-hhhhhhc-----
Confidence            3444 44457899999888752 112212111 3411000001    13455555554444433222 1111111     


Q ss_pred             cccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE-----EEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152          87 EGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE-----CMKHNKHSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        87 ~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      ..++  ..+.....+++.++.+..+.+|+...+.... ...+.....     -+-++++.-++++|+.-+.|.+|+....
T Consensus        87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~-~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d  165 (967)
T KOG0974|consen   87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLS-KIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED  165 (967)
T ss_pred             cccccccchhhhcceEEEEEcCceEEEEecccCceeh-hcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc
Confidence            2222  3345677889999999999999998776664 333333221     1233556778999999999999999853


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce-EEEeCCCCCeeEE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV-LKVDIPDVALSCI  238 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~i~~~  238 (444)
                      +.-..+.+|.+                  .|.++.|+-+|.++++.+.|.++|+|++.   ..... ...-+|...+..+
T Consensus       166 n~p~~l~GHeG------------------~iF~i~~s~dg~~i~s~SdDRsiRlW~i~---s~~~~~~~~fgHsaRvw~~  224 (967)
T KOG0974|consen  166 NKPIRLKGHEG------------------SIFSIVTSLDGRYIASVSDDRSIRLWPID---SREVLGCTGFGHSARVWAC  224 (967)
T ss_pred             CCcceecccCC------------------ceEEEEEccCCcEEEEEecCcceeeeecc---cccccCcccccccceeEEE
Confidence            33335677777                  89999999999999999999999999999   33333 3556899999999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC-ceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG-CVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~-~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +|.|+  .|++++.|-+.++|+..  +..+..+.+|.+ .|..++..+....+++++.|+.+++|++..
T Consensus       225 ~~~~n--~i~t~gedctcrvW~~~--~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  225 CFLPN--RIITVGEDCTCRVWGVN--GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             Eeccc--eeEEeccceEEEEEecc--cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            99988  89999999999999765  677778888854 789999999989999999999999999875

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.54  E-value=4.5e-12  Score=119.76  Aligned_cols=211  Identities=13%  Similarity=0.088  Sum_probs=137.4

Q ss_pred             CeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEecC---CcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVKS---GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      ..|.++|....... .+.  .+...+  ..++|+|++|+.+...   ..|++|++.+++... +..+...+.+++|+|++
T Consensus       170 ~~l~~~d~~g~~~~-~l~--~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg  245 (417)
T TIGR02800       170 YELQVADYDGANPQ-TIT--RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDG  245 (417)
T ss_pred             ceEEEEcCCCCCCE-Eee--cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC
Confidence            36888887644333 332  223333  4568999998887654   479999999886553 44456667789999999


Q ss_pred             CEEEE-eeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc--eEEE
Q psy8152         140 NIIAT-GGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG--YVRV  213 (444)
Q Consensus       140 ~~l~~-~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~i  213 (444)
                      +.|+. .+.++  .|++|++.+++... +..+..                  ......|+|+++.|+..+. .+  .|++
T Consensus       246 ~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~------------------~~~~~~~s~dg~~l~~~s~~~g~~~iy~  306 (417)
T TIGR02800       246 SKLAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPG------------------IDTEPSWSPDGKSIAFTSDRGGSPQIYM  306 (417)
T ss_pred             CEEEEEECCCCCccEEEEECCCCCEEE-CCCCCC------------------CCCCEEECCCCCEEEEEECCCCCceEEE
Confidence            87764 34443  58888988765332 222222                  2456789999988876554 33  5777


Q ss_pred             EEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC---cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE
Q psy8152         214 YDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG---DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI  290 (444)
Q Consensus       214 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l  290 (444)
                      +++.   ... ...+..+...+..+.|+|+|++|+.++.++   .|.+||+.+ +.. ..+... .......|+|++++|
T Consensus       307 ~d~~---~~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~-~~~-~~l~~~-~~~~~p~~spdg~~l  379 (417)
T TIGR02800       307 MDAD---GGE-VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG-GGE-RVLTDT-GLDESPSFAPNGRMI  379 (417)
T ss_pred             EECC---CCC-EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC-CCe-EEccCC-CCCCCceECCCCCEE
Confidence            7876   222 333444555677889999999999887765   788999886 443 333322 233456899999988


Q ss_pred             EEEECCC---cEEEEEcC
Q psy8152         291 LSVSLDR---HFRVHDFH  305 (444)
Q Consensus       291 ~s~~~dg---~i~vw~~~  305 (444)
                      +..+.++   .+++.+..
T Consensus       380 ~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       380 LYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             EEEEeCCCcEEEEEEECC
Confidence            8777654   34555543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.54  E-value=1.5e-11  Score=114.38  Aligned_cols=302  Identities=13%  Similarity=0.131  Sum_probs=187.5

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .+..+++++.+|.|+.++..+++..    -....   ...+ .....   ++..+++++.++.++.+|..+|+.+.....
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~----W~~~~---~~~~~~~p~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~  133 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRL----WRVDL---DERLSGGVGA---DGGLVFVGTEKGEVIALDAEDGKELWRAKL  133 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEe----eeecC---CCCcccceEE---cCCEEEEEcCCCEEEEEECCCCcEeeeecc
Confidence            3567899999999999999888742    11111   1111 12222   367888888999999999999998876643


Q ss_pred             ccccccEEE-EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE-----EEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVG-VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE-----CMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~-~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      .+   .+.+ ....+..++.++.++.|+.||..+++.++........+.     +...  .+..++.+..++.+..+|+.
T Consensus       134 ~~---~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~  208 (377)
T TIGR03300       134 SS---EVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQ  208 (377)
T ss_pred             Cc---eeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEcc
Confidence            22   2221 112456777788899999999999988764333221111     1111  23477888888999999999


Q ss_pred             CceeeeeeecccceeeEeeeCCCcc-cccCccce-eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCe
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEF-DLRRPVWV-NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVAL  235 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i  235 (444)
                      +++.+........         .+. .......+ .+..+  .+..+++++.+|.++.||..   .+..+......  ..
T Consensus       209 tG~~~W~~~~~~~---------~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~---tG~~~W~~~~~--~~  272 (377)
T TIGR03300       209 TGQPLWEQRVALP---------KGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLR---SGRVLWKRDAS--SY  272 (377)
T ss_pred             CCCEeeeeccccC---------CCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECC---CCcEEEeeccC--Cc
Confidence            9987765432110         000 00000000 11112  24577788889999999998   56666554421  11


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC-ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG-CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~-~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .....  .+..|++++.+|.|+.+|..+ ++.+........ .......  .+..|++++.+|.|++++..+++.+.++.
T Consensus       273 ~~p~~--~~~~vyv~~~~G~l~~~d~~t-G~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~  347 (377)
T TIGR03300       273 QGPAV--DDNRLYVTDADGVVVALDRRS-GSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLK  347 (377)
T ss_pred             cCceE--eCCEEEEECCCCeEEEEECCC-CcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence            22222  466888888999999999998 888776632111 1222222  35688999999999999999999998876


Q ss_pred             cCC-ceeEEEEcCCCcccccchhhhhccccccCCCcccc
Q psy8152         315 MQS-RLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKY  352 (444)
Q Consensus       315 ~~~-~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W  352 (444)
                      ... .+...   +..      .+ ..+..++.||.|..+
T Consensus       348 ~~~~~~~~s---p~~------~~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       348 TDGSGIASP---PVV------VG-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             cCCCccccC---CEE------EC-CEEEEEeCCceEEEe
Confidence            433 22111   111      11 235566778777544

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.54  E-value=7.1e-12  Score=118.54  Aligned_cols=234  Identities=10%  Similarity=0.061  Sum_probs=149.2

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEE
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~   93 (444)
                      .|.+++......     +.+.  .+...+....|+ |+++.|+..+..   ..|++|++.+++........+ ......+
T Consensus       180 ~l~~~d~~g~~~-----~~l~--~~~~~~~~p~wS-pDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g-~~~~~~~  250 (430)
T PRK00178        180 TLQRSDYDGARA-----VTLL--QSREPILSPRWS-PDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEG-LNGAPAW  250 (430)
T ss_pred             EEEEECCCCCCc-----eEEe--cCCCceeeeeEC-CCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCC-CcCCeEE
Confidence            366666654431     2222  467788999999 799998876643   469999998886554332222 2224678


Q ss_pred             EeCCCeEEE-EecCC--cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-C--CeEEEEEcCCceeeeeeec
Q psy8152          94 SRYDECILT-AVKSG--DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-E--NDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        94 s~~~~~l~~-~~~dg--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~vwd~~~~~~~~~~~~  167 (444)
                      +|+|+.|+. ...++  .|++|++.+++... +..+........|+|+++.|+..+. +  ..|+++++.+++.... ..
T Consensus       251 SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~l-t~  328 (430)
T PRK00178        251 SPDGSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERV-TF  328 (430)
T ss_pred             CCCCCEEEEEEccCCCceEEEEECCCCCeEE-cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEe-ec
Confidence            999998764 44444  58888998877653 5555556677899999998876654 3  3577778776653322 11


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-c--eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-G--YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      ...                  ......|+|++++|+..+.. +  .|.+||+.   .... ..+.. ........|+|+|
T Consensus       329 ~~~------------------~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~---tg~~-~~lt~-~~~~~~p~~spdg  385 (430)
T PRK00178        329 VGN------------------YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQ---RGSV-RILTD-TSLDESPSVAPNG  385 (430)
T ss_pred             CCC------------------CccceEECCCCCEEEEEEccCCceEEEEEECC---CCCE-EEccC-CCCCCCceECCCC
Confidence            111                  23456899999888876543 2  58888987   2222 22222 1222356899999


Q ss_pred             CEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         245 HYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       245 ~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      +.|+..+..   ..|+++++.  +.....+..+.+.+...+|+|-
T Consensus       386 ~~i~~~~~~~g~~~l~~~~~~--g~~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        386 TMLIYATRQQGRGVLMLVSIN--GRVRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             CEEEEEEecCCceEEEEEECC--CCceEECcCCCCCcCCCccCCC
Confidence            998876543   346677764  4555566655566777788863

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.53  E-value=6.6e-11  Score=105.31  Aligned_cols=260  Identities=13%  Similarity=0.006  Sum_probs=169.3

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec----------CCcEEEEEcCCCCccccccc-------cC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK----------SGDVKLWRYKTEPDQWTNFN-------VG  127 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~-------~~  127 (444)
                      ++|.+.|..+++.+..+.. +...... ++|+++.|+++..          +..|.+||+.+.+.+..+.-       ..
T Consensus        27 ~~v~ViD~~~~~v~g~i~~-G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDG-GFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEc-cCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            8999999999999888864 3333343 9999998777665          78999999999988763332       12


Q ss_pred             CCeEEEEEeccCCEEEEee-C-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         128 PQLECMKHNKHSNIIATGG-K-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~-~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      .....++++|+|++|++.. . ++.|.+.|+.+++.+..+.....                   ..-+..++... + +-
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~-------------------~~vy~t~e~~~-~-~~  163 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDC-------------------YHIFPTANDTF-F-MH  163 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCC-------------------cEEEEecCCcc-E-EE
Confidence            2344789999999999776 3 78999999999998887764332                   11111222111 1 12


Q ss_pred             eCCceEEEEEcCCCCCccceEEEe---C-----CCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCC----CcceeEec
Q psy8152         206 SKQGYVRVYDPKITTQRRPVLKVD---I-----PDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGK----GKPCYKYK  272 (444)
Q Consensus       206 ~~d~~i~i~d~~~~~~~~~~~~~~---~-----~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~  272 (444)
                      +.||......+...++ ....+..   .     ...+    .|.+ +|+++++... |+|++.|+...    ...+..+.
T Consensus       164 ~~Dg~~~~v~~d~~g~-~~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~  237 (352)
T TIGR02658       164 CRDGSLAKVGYGTKGN-PKIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFT  237 (352)
T ss_pred             eecCceEEEEecCCCc-eEEeeeeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeecc
Confidence            2344444433331111 1111111   1     0122    4455 7888887776 99999996430    23333322


Q ss_pred             c-------ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccch
Q psy8152         273 G-------FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETK  335 (444)
Q Consensus       273 ~-------h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  335 (444)
                      .       ..+.+.-++++|++++++....          .+.|.++|..+++.+.++....++..++++++-.      
T Consensus       238 ~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgk------  311 (352)
T TIGR02658       238 EAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAK------  311 (352)
T ss_pred             ccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCC------
Confidence            1       2234445899999988877532          2579999999999999999999999999987621      


Q ss_pred             hhhhccccccCCCccccCCCccccc
Q psy8152         336 KEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       336 ~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                       ..+.++...++.|.+.|..+.+..
T Consensus       312 -p~lyvtn~~s~~VsViD~~t~k~i  335 (352)
T TIGR02658       312 -PLLYALSTGDKTLYIFDAETGKEL  335 (352)
T ss_pred             -eEEEEeCCCCCcEEEEECcCCeEE
Confidence             123344446788999998876544

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4547|consensus

Probab=99.53  E-value=5.6e-13  Score=120.21  Aligned_cols=214  Identities=10%  Similarity=0.107  Sum_probs=159.1

Q ss_pred             ccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE
Q psy8152          52 NVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE  131 (444)
Q Consensus        52 ~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~  131 (444)
                      ||...++|....||.+++|+..+++....|.-..                ..+..++-..|.+.-.....+.... ..+.
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~----------------~~s~t~~~~~w~L~~~~s~~k~~~~-~~~~   64 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA----------------SLSGTCTYTKWGLSADYSPMKWLSL-EKAK   64 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccch----------------hccCcceeEEEEEEeccchHHHHhH-HHHh
Confidence            3567899999999999999999888777664211                1222333444543322111000000 0000


Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV  211 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  211 (444)
                        .-+.+...++-|...|.|.+|++..++....+....+                ...|.++.++.+-..|.+++.|+.+
T Consensus        65 --~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h----------------~~~v~~~~~~~~~~ciyS~~ad~~v  126 (541)
T KOG4547|consen   65 --KASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKH----------------YGNVNEILDAQRLGCIYSVGADLKV  126 (541)
T ss_pred             --hccCCceEEEeecCCccEEEEEecCCeEEEEEecCCC----------------CCcceeeecccccCceEecCCceeE
Confidence              1122556788899999999999999998887764443                4479999999888999999999999


Q ss_pred             EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCC-----
Q psy8152         212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN-----  286 (444)
Q Consensus       212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~-----  286 (444)
                      ..|+..   ..+.+..+......+.+++.+|++..+++++  +.|++||+.+ ++.+.+|.+|.++|++++|.-.     
T Consensus       127 ~~~~~~---~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~-kevv~~ftgh~s~v~t~~f~~~~~g~~  200 (541)
T KOG4547|consen  127 VYILEK---EKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIET-KEVVITFTGHGSPVRTLSFTTLIDGII  200 (541)
T ss_pred             EEEecc---cceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccC-ceEEEEecCCCcceEEEEEEEeccccc
Confidence            999999   8888888888888899999999999999886  4699999999 9999999999999999999765     


Q ss_pred             CCEEEE-EECCCcEEEEEcCC
Q psy8152         287 ENLILS-VSLDRHFRVHDFHS  306 (444)
Q Consensus       287 ~~~l~s-~~~dg~i~vw~~~~  306 (444)
                      |.++++ ...+..+.+|-+..
T Consensus       201 G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  201 GKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             cceeeeccccccceeEEEEEc
Confidence            555544 45666788887654

>KOG2041|consensus

Probab=99.53  E-value=2.8e-12  Score=118.13  Aligned_cols=274  Identities=14%  Similarity=0.130  Sum_probs=187.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCcc--------ceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKC--------IIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF   74 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~--------~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~   74 (444)
                      ...++|++|+.+|.+++..+.+...        ...++..-+.+ +|...|.-+.|+ .+.+.|-+...+|.|.||-+-+
T Consensus        24 ke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWN-e~~QKLTtSDt~GlIiVWmlyk  102 (1189)
T KOG2041|consen   24 KESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWN-ENNQKLTTSDTSGLIIVWMLYK  102 (1189)
T ss_pred             ccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEec-cccccccccCCCceEEEEeeec
Confidence            4568999999999999999865432        12223222333 999999999999 7888888999999999999998


Q ss_pred             CccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEE
Q psy8152          75 KNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLK  152 (444)
Q Consensus        75 ~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  152 (444)
                      +.....+.-......|.++++  +|..|+..-.||.|.+=.+...+...+.. .......+.|+++...++.+-..|.++
T Consensus       103 gsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeL-kg~~l~hv~ws~D~~~~Lf~~ange~h  181 (1189)
T KOG2041|consen  103 GSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKEL-KGQLLAHVLWSEDLEQALFKKANGETH  181 (1189)
T ss_pred             ccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhc-chheccceeecccHHHHHhhhcCCcEE
Confidence            887766544444666667765  78999999999999887776544332111 122345789999999999999999999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe--------cCCCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL--------PNSDKVAVCSKQGYVRVYDPKITTQRRP  224 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~~  224 (444)
                      +||....- ...+.  .......    .+.....+..|-.+.|.        |+...|+++..+|.+.|..-.  ....|
T Consensus       182 lydnqgnF-~~Kl~--~~c~Vn~----tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~e--ND~~P  252 (1189)
T KOG2041|consen  182 LYDNQGNF-ERKLE--KDCEVNG----TGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSE--NDPEP  252 (1189)
T ss_pred             EecccccH-HHhhh--hceEEee----eeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhc--CCCCC
Confidence            99976421 11110  0000000    00000111235555553        466789999999999987665  23344


Q ss_pred             eEEEeCCCCCeeEEEEccCCCEEEEEcCCC---------cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         225 VLKVDIPDVALSCITTTNQSHYVIVGSTTG---------DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       225 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      +.. . ....+..+.|+|+|..|++++.+.         .|.+|..-  |+.+.+++.....|++++|-..|-.++.
T Consensus       253 vv~-d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~--G~i~gtlkvpg~~It~lsWEg~gLriA~  325 (1189)
T KOG2041|consen  253 VVV-D-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY--GHIVGTLKVPGSCITGLSWEGTGLRIAI  325 (1189)
T ss_pred             eEE-e-cccEeecceecCCCcEEEEccCcccccCccccceEEEeccc--hhheEEEecCCceeeeeEEcCCceEEEE
Confidence            432 2 226688999999999999987652         56666544  7888888887888999999766654444

>KOG0280|consensus

Probab=99.52  E-value=4.5e-12  Score=104.76  Aligned_cols=269  Identities=16%  Similarity=0.150  Sum_probs=176.5

Q ss_pred             CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec--cCCc-EEEEEEcCCeEEEEeCCCCccccceeec-ccc--
Q psy8152          14 STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN--VEES-ELLIAYSGQKIKIYDTDFKNFNTNTDVS-FGE--   87 (444)
Q Consensus        14 ~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~-~~~--   87 (444)
                      ..|.+.+|++...+...  +..++. .-...+..|.|..  .++. .|+-+-..|.|.+|..........+..- ...  
T Consensus        44 R~Gkl~Lys~~d~~~~~--l~~~q~-~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~  120 (339)
T KOG0280|consen   44 RSGKLHLYSLEDMKLSP--LDTLQC-TDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKIS  120 (339)
T ss_pred             eccceEEEeecccccCc--cceeee-ecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhh
Confidence            34678889887776421  333333 2346778888863  3344 5566777899999987644333322210 111  


Q ss_pred             ---ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc--ccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC-ce
Q psy8152          88 ---GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ--WTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT-TK  160 (444)
Q Consensus        88 ---~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~-~~  160 (444)
                         ...+.+++.+..++++-.+|.+.+-+.......  +....|..+++-+.|+. +.+++++|+.|+.+..||++. ++
T Consensus       121 ~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~  200 (339)
T KOG0280|consen  121 VVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT  200 (339)
T ss_pred             heeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc
Confidence               122334667888999999999986665544333  25778999999999988 778999999999999999994 44


Q ss_pred             eeee-eecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         161 NIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      .++. .+.|..                  .|.+|.-+|. ..+|++|+.|-.|++||.|  ...+|+..-. -.+.|..+
T Consensus       201 ~i~~n~kvH~~------------------GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR--nm~kPl~~~~-v~GGVWRi  259 (339)
T KOG0280|consen  201 FIWHNSKVHTS------------------GVVSIYSSPPKPTYIATGSYDECIRVLDTR--NMGKPLFKAK-VGGGVWRI  259 (339)
T ss_pred             eeeecceeeec------------------ceEEEecCCCCCceEEEeccccceeeeehh--cccCccccCc-cccceEEE
Confidence            4443 333443                  5888888764 5899999999999999999  5566666443 34679999


Q ss_pred             EEccC--CCEEEEEcCCCcEEEEEcCCC-Cc---ceeEeccccCceeEEEecCCCCEEEEEE-CCCcEE-EEEcCCC
Q psy8152         239 TTTNQ--SHYVIVGSTTGDMMAVDLRGK-GK---PCYKYKGFAGCVKDIACPLNENLILSVS-LDRHFR-VHDFHSK  307 (444)
Q Consensus       239 ~~~~~--~~~l~~~~~dg~i~iwd~~~~-~~---~~~~~~~h~~~i~~~~~s~~~~~l~s~~-~dg~i~-vw~~~~~  307 (444)
                      .++|.  +..|+++-.+| .+|.+.... .+   .+.....|.+-+..-.|.....+||+++ .|+.++ +|-.-++
T Consensus       260 ~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~  335 (339)
T KOG0280|consen  260 KHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG  335 (339)
T ss_pred             EecchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence            99995  33444444444 677777651 12   2334446766666667755556788865 466644 6654433

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=1.3e-11  Score=116.33  Aligned_cols=218  Identities=12%  Similarity=0.023  Sum_probs=139.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEE-EecCCc--EEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILT-AVKSGD--VKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~-~~~dg~--i~iw~  113 (444)
                      .+...+.+..|+ |+++.|+..+..   ..|++|++.+++........++ ..-..++|+|+.|+. .+.++.  |++++
T Consensus       215 ~~~~~~~~p~wS-PDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~-~~~~~wSPDG~~La~~~~~~g~~~Iy~~d  292 (448)
T PRK04792        215 RSPEPLMSPAWS-PDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGI-NGAPRFSPDGKKLALVLSKDGQPEIYVVD  292 (448)
T ss_pred             cCCCcccCceEC-CCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCC-cCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence            456788899999 799988876543   3688999988765433222222 223578999997765 455664  77888


Q ss_pred             cCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-EN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      +.+++... +..+.......+|+|+++.|+..+. ++  .|.++++.+++... +.....                  ..
T Consensus       293 l~tg~~~~-lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~------------------~~  352 (448)
T PRK04792        293 IATKALTR-ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGE------------------QN  352 (448)
T ss_pred             CCCCCeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCC------------------CC
Confidence            88776553 4455556778899999998876654 33  46666776665332 211111                  23


Q ss_pred             eEEEEecCCCEEEEEeC-Cc--eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-C--cEEEEEcCCC
Q psy8152         191 NGISFLPNSDKVAVCSK-QG--YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-G--DMMAVDLRGK  264 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~  264 (444)
                      ...+|+|+|++|+..+. .+  .|.++|+.   .... ..+... .......|+|+|+.|+..+.. +  .++++++.  
T Consensus       353 ~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~---~g~~-~~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~--  425 (448)
T PRK04792        353 LGGSITPDGRSMIMVNRTNGKFNIARQDLE---TGAM-QVLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID--  425 (448)
T ss_pred             cCeeECCCCCEEEEEEecCCceEEEEEECC---CCCe-EEccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECC--
Confidence            45689999988876654 33  45556776   2222 222222 122345899999988775443 3  36777763  


Q ss_pred             CcceeEeccccCceeEEEecCC
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      +.....+..+.+.+...+|+|-
T Consensus       426 G~~~~~l~~~~g~~~~p~Wsp~  447 (448)
T PRK04792        426 GRFKARLPAGQGEVKSPAWSPF  447 (448)
T ss_pred             CCceEECcCCCCCcCCCccCCC
Confidence            6777777766667788889873

>KOG4547|consensus

Probab=99.50  E-value=6.8e-12  Score=113.37  Aligned_cols=192  Identities=12%  Similarity=0.130  Sum_probs=153.9

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeee------c-------------cCCcEEEEEEc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWG------N-------------VEESELLIAYS   63 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~------~-------------~~~~~l~~~~~   63 (444)
                      ++...++|....+|.+++|+...++. ...+.+...  -.+..++..|.      |             .+...++-|..
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~-~~e~~p~~~--~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~   78 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQL-QQEFAPIAS--LSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTP   78 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCcee-eeeeccchh--ccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecC
Confidence            45668999999999999999998886 233333332  23344444442      1             23456777888


Q ss_pred             CCeEEEEeCCCCccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCE
Q psy8152          64 GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNI  141 (444)
Q Consensus        64 d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  141 (444)
                      .|.|.+|++..++....+....|.+.|.++..  +-..|.+++.|+.+..|+....+.+......+..+.+++.+|++.+
T Consensus        79 ~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~  158 (541)
T KOG4547|consen   79 QGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKI  158 (541)
T ss_pred             CccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCE
Confidence            99999999999999999987789999998864  4467999999999999999999988877788889999999999999


Q ss_pred             EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-----CCEEEE-EeCCceEEEEE
Q psy8152         142 IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-----SDKVAV-CSKQGYVRVYD  215 (444)
Q Consensus       142 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~~-~~~d~~i~i~d  215 (444)
                      |++++  +.|++||+.+++.+.++.+|..                  +|++++|...     |.++++ ......+.+|-
T Consensus       159 l~~as--~~ik~~~~~~kevv~~ftgh~s------------------~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~  218 (541)
T KOG4547|consen  159 LLTAS--RQIKVLDIETKEVVITFTGHGS------------------PVRTLSFTTLIDGIIGKYVLSSAAAERGITVWV  218 (541)
T ss_pred             EEecc--ceEEEEEccCceEEEEecCCCc------------------ceEEEEEEEeccccccceeeeccccccceeEEE
Confidence            99998  6899999999999999999998                  7888888776     555554 44566677887


Q ss_pred             cC
Q psy8152         216 PK  217 (444)
Q Consensus       216 ~~  217 (444)
                      +.
T Consensus       219 v~  220 (541)
T KOG4547|consen  219 VE  220 (541)
T ss_pred             EE
Confidence            76

>KOG0280|consensus

Probab=99.49  E-value=1.2e-11  Score=102.38  Aligned_cols=210  Identities=13%  Similarity=0.105  Sum_probs=152.9

Q ss_pred             cCCcEEEEEcCCCCccc---cccccCCCeEEEEEec---cCC-EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeee
Q psy8152         105 KSGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNK---HSN-IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSV  177 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  177 (444)
                      ..|.+.+|++...+...   ....-...+..+.|..   ++. .++-+...|.|.++..........+.+....-     
T Consensus        44 R~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~k-----  118 (339)
T KOG0280|consen   44 RSGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKK-----  118 (339)
T ss_pred             eccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhh-----
Confidence            44688899887766553   1112344567777764   444 56667778889988876554444444333200     


Q ss_pred             CCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcE
Q psy8152         178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDM  256 (444)
Q Consensus       178 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i  256 (444)
                            .... ...++.|++.+..++++-.+|.+.+-+.. ......++.++.|..++....|+.. .+++++|+.|+.+
T Consensus       119 ------i~~~-~~lslD~~~~~~~i~vs~s~G~~~~v~~t-~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l  190 (339)
T KOG0280|consen  119 ------ISVV-EALSLDISTSGTKIFVSDSRGSISGVYET-EMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSL  190 (339)
T ss_pred             ------hhhe-eeeEEEeeccCceEEEEcCCCcEEEEecc-eeeeeecccccccceeeeeeecccCCCceEEecCCCceE
Confidence                  0000 14577899999889999999999865554 2344555678899999999999764 5789999999999


Q ss_pred             EEEEcCCCCcceeE-eccccCceeEEEecC-CCCEEEEEECCCcEEEEEcCC-CceEEEeecCCceeEEEEcCC
Q psy8152         257 MAVDLRGKGKPCYK-YKGFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHS-KKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       257 ~iwd~~~~~~~~~~-~~~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~-~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      ..||++.|++.+.. .+.|...|.++.-+| ...+|++|+.|-.|++||.++ ++++......+.|+.+...+.
T Consensus       191 ~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~  264 (339)
T KOG0280|consen  191 SCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPE  264 (339)
T ss_pred             EEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecch
Confidence            99999965666655 557899999998886 467999999999999999995 788877778888999988765

>KOG1064|consensus

Probab=99.49  E-value=1.2e-13  Score=138.41  Aligned_cols=195  Identities=14%  Similarity=0.205  Sum_probs=156.0

Q ss_pred             cccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          87 EGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        87 ~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      -..|.++  +|...+.++|+.||.|++|....++.+.... ..+..|+.+.|+.+|+.+..+..||.+.+|.+. .++..
T Consensus      2208 v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~ 2286 (2439)
T KOG1064|consen 2208 VENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYT 2286 (2439)
T ss_pred             cCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Cccee
Confidence            3445556  4677899999999999999988887765222 134789999999999999999999999999987 56666


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE---eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEE
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC---SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITT  240 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~  240 (444)
                      ..+.|..                  ....+.|-.  ..++++   +.++.+.+||.........+.  ..|...++++++
T Consensus      2287 s~qchnk------------------~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~ 2344 (2439)
T KOG1064|consen 2287 SWQCHNK------------------ALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAY 2344 (2439)
T ss_pred             ccccCCc------------------cccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEE
Confidence            6666665                  466666654  556655   347899999987334444444  789999999999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM  315 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~  315 (444)
                      .|..++|++|+.+|.|++||++. .+++++++.         +. ...++++|+..|.|+||++..-.+++.+.+
T Consensus      2345 ~P~~qllisggr~G~v~l~D~rq-rql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2345 APKHQLLISGGRKGEVCLFDIRQ-RQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred             cCcceEEEecCCcCcEEEeehHH-HHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence            99999999999999999999999 888888875         44 567999999999999999998877777653

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.49  E-value=3.7e-11  Score=113.72  Aligned_cols=212  Identities=11%  Similarity=0.020  Sum_probs=132.8

Q ss_pred             eEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecC---CcEEEEEcCCCCccccccccCCCeEEEEEeccCC
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKS---GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  140 (444)
                      .|.++|...+.... +.  .+...+.  .++|+|+.|+..+..   ..|.+|++.+++... +......+...+|+|+|+
T Consensus       180 ~l~~~d~~g~~~~~-l~--~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~  255 (430)
T PRK00178        180 TLQRSDYDGARAVT-LL--QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGS  255 (430)
T ss_pred             EEEEECCCCCCceE-Ee--cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCC
Confidence            47778877554332 22  3334444  678999998776643   368999998887653 333445566789999998


Q ss_pred             EEEE-eeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc--eEEEE
Q psy8152         141 IIAT-GGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG--YVRVY  214 (444)
Q Consensus       141 ~l~~-~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~i~  214 (444)
                      .|+. ...++  .|++||+.+++.. .+..+..                  ......|+|+++.|+..+. ++  .|+++
T Consensus       256 ~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~------------------~~~~~~~spDg~~i~f~s~~~g~~~iy~~  316 (430)
T PRK00178        256 KLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPA------------------IDTEPFWGKDGRTLYFTSDRGGKPQIYKV  316 (430)
T ss_pred             EEEEEEccCCCceEEEEECCCCCeE-EcccCCC------------------CcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence            8874 44444  6888899876543 2322222                  3556789999987765553 33  57777


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-C--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-G--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      ++.   .... ..+...........|+|+|++|+..+.. +  .|.+||+.+ +.. ..+.. ........|+|+|++|+
T Consensus       317 d~~---~g~~-~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t-g~~-~~lt~-~~~~~~p~~spdg~~i~  389 (430)
T PRK00178        317 NVN---GGRA-ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR-GSV-RILTD-TSLDESPSVAPNGTMLI  389 (430)
T ss_pred             ECC---CCCE-EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCC-CCE-EEccC-CCCCCCceECCCCCEEE
Confidence            776   2222 2222222233457899999998876543 3  588899887 543 33332 22223568999999887


Q ss_pred             EEECC---CcEEEEEcCCC
Q psy8152         292 SVSLD---RHFRVHDFHSK  307 (444)
Q Consensus       292 s~~~d---g~i~vw~~~~~  307 (444)
                      ..+.+   ..|+++++..+
T Consensus       390 ~~~~~~g~~~l~~~~~~g~  408 (430)
T PRK00178        390 YATRQQGRGVLMLVSINGR  408 (430)
T ss_pred             EEEecCCceEEEEEECCCC
Confidence            76643   34667777543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=6.2e-11  Score=110.87  Aligned_cols=239  Identities=10%  Similarity=0.039  Sum_probs=141.7

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEE---EEEEcC--CeEEEEeCCCCccccceeeccccccE
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESEL---LIAYSG--QKIKIYDTDFKNFNTNTDVSFGEGDI   90 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l---~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~v   90 (444)
                      ..|.+.+...+..     +.+.  .....+..-+|+ |+++.+   ++...+  ..|++.++.+++........+ ....
T Consensus       165 ~~l~~~d~dG~~~-----~~lt--~~~~~~~sP~wS-PDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g-~~~~  235 (428)
T PRK01029        165 GELWSVDYDGQNL-----RPLT--QEHSLSITPTWM-HIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQG-NQLM  235 (428)
T ss_pred             ceEEEEcCCCCCc-----eEcc--cCCCCcccceEc-cCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCC-Cccc
Confidence            3566666655442     2222  234556778999 788652   233333  468888888776554433323 2334


Q ss_pred             EEEEeCCCeEEEEec-CC----cEEEEEcCCC---CccccccccCCCeEEEEEeccCCEEEEee-CCCeEEEE--EcCC-
Q psy8152          91 VGVSRYDECILTAVK-SG----DVKLWRYKTE---PDQWTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLW--DLNT-  158 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~-dg----~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw--d~~~-  158 (444)
                      ..++|+|+.|+..+. .|    .+.+|++..+   ........+.......+|+|+|+.|+..+ .+|...+|  ++.. 
T Consensus       236 p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~  315 (428)
T PRK01029        236 PTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE  315 (428)
T ss_pred             eEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence            678999998876553 22    3444676653   32222222233456789999999887665 45655555  4432 


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC---ceEEEEEcCCCCCccceEEEeCCCCCe
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ---GYVRVYDPKITTQRRPVLKVDIPDVAL  235 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i  235 (444)
                      +.....+.....                  .+....|+|+|+.|+..+..   ..|.+||+.   .... ..+......+
T Consensus       316 g~~~~~lt~~~~------------------~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~---~g~~-~~Lt~~~~~~  373 (428)
T PRK01029        316 GQSPRLLTKKYR------------------NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA---TGRD-YQLTTSPENK  373 (428)
T ss_pred             ccceEEeccCCC------------------CccceeECCCCCEEEEEEcCCCCcEEEEEECC---CCCe-EEccCCCCCc
Confidence            222222222222                  46778999999988866543   479999998   3322 2333333456


Q ss_pred             eEEEEccCCCEEEEEcC---CCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         236 SCITTTNQSHYVIVGST---TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      ....|+|+|+.|+....   ...|+++++.. ++... +....+.+...+|+|-.
T Consensus       374 ~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~-g~~~~-Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        374 ESPSWAIDSLHLVYSAGNSNESELYLISLIT-KKTRK-IVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             cceEECCCCCEEEEEECCCCCceEEEEECCC-CCEEE-eecCCCcccCceecCCC
Confidence            78999999998875332   34688889886 55433 33344556677888753

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.46  E-value=2e-10  Score=102.09  Aligned_cols=308  Identities=10%  Similarity=0.028  Sum_probs=199.1

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---------------CeEEEE
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---------------QKIKIY   70 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---------------~~i~vw   70 (444)
                      +.+|++.... .|.+|.-..... ...   +   . ...|.-+.|+ |++++|.+=+..               +.+.+|
T Consensus        44 G~~l~~~~~~-~V~~~~g~~~~~-l~~---~---~-~~~V~~~~fS-P~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vw  113 (561)
T COG5354          44 GTYLFSEHAA-GVECWGGPSKAK-LVR---F---R-HPDVKYLDFS-PNEKYLVTWSREPIIEPEIEISPFTSKNNVFVW  113 (561)
T ss_pred             chheehhhcc-ceEEccccchhh-eee---e---e-cCCceecccC-cccceeeeeccCCccChhhccCCccccCceeEE
Confidence            3444444444 567787554432 111   1   2 4578999999 799999985442               359999


Q ss_pred             eCCCCccccceeecccc--cc-EEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc-ccc-cCCCeEEEEEecc--CCEEE
Q psy8152          71 DTDFKNFNTNTDVSFGE--GD-IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT-NFN-VGPQLECMKHNKH--SNIIA  143 (444)
Q Consensus        71 ~~~~~~~~~~~~~~~~~--~~-v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~-~~~~v~~~~~~~~--~~~l~  143 (444)
                      |+.++.++..+......  .+ +..++.+.+++|-. ....++|+++ +...... +.. ....|....|+|.  +..||
T Consensus       114 d~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la  191 (561)
T COG5354         114 DIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELA  191 (561)
T ss_pred             eccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEE
Confidence            99999999988765444  33 77888888776654 3347899997 3332221 111 2356888899993  44455


Q ss_pred             E-----eeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-----------C
Q psy8152         144 T-----GGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-----------K  207 (444)
Q Consensus       144 ~-----~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------~  207 (444)
                      .     .+..+.+++|.+..+..+.+-....-                  .=..+.|++.|++|++-.           .
T Consensus       192 ~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~------------------~~~qLkW~~~g~~ll~l~~t~~ksnKsyfg  253 (561)
T COG5354         192 YWTPEKLNKPAMVRILSIPKNSVLVTKNLFKV------------------SGVQLKWQVLGKYLLVLVMTHTKSNKSYFG  253 (561)
T ss_pred             EEccccCCCCcEEEEEEccCCCeeeeeeeEee------------------cccEEEEecCCceEEEEEEEeeecccceec
Confidence            3     45678899999987665543322221                  234577888887665321           1


Q ss_pred             CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE--EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecC
Q psy8152         208 QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV--GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL  285 (444)
Q Consensus       208 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~  285 (444)
                      ...++|+++.   .. .+........+|...+|.|.++.+++  |-..-.+.++|++.  +....++  .+.=+.+.|+|
T Consensus       254 esnLyl~~~~---e~-~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~--Nl~~~~P--e~~rNT~~fsp  325 (561)
T COG5354         254 ESNLYLLRIT---ER-SIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG--NLRFYFP--EQKRNTIFFSP  325 (561)
T ss_pred             cceEEEEeec---cc-ccceeccccccceeeeecccCCceeEEecccccceeeccccc--ceEEecC--CcccccccccC
Confidence            3467888887   22 22222255788999999998877665  56788899999985  4555554  34446778999


Q ss_pred             CCCEEEEEECC---CcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcccc------ccCCCccccCCCc
Q psy8152         286 NENLILSVSLD---RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSE------EKGDSDEKYDPEH  356 (444)
Q Consensus       286 ~~~~l~s~~~d---g~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~------~~d~~i~~W~~~~  356 (444)
                      .+++++.++.+   |.|-+|+..................+.|+++         +.++.++      -.|..++||++.+
T Consensus       326 ~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd---------~qF~~~~~ts~k~~~Dn~i~l~~v~g  396 (561)
T COG5354         326 HERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPD---------GQFYDTDTTSEKLRVDNSIKLWDVYG  396 (561)
T ss_pred             cccEEEEecCCccccceEEeccCCceEEEEEeecCCceEeeccCC---------ceEEEecCCCcccccCcceEEEEecC
Confidence            99999998865   6799999987666553333333444445544         2332222      2578899999987


Q ss_pred             cccc
Q psy8152         357 FEMN  360 (444)
Q Consensus       357 ~~~~  360 (444)
                      ...-
T Consensus       397 ~~~f  400 (561)
T COG5354         397 AKVF  400 (561)
T ss_pred             chhh
Confidence            5543

>KOG1409|consensus

Probab=99.46  E-value=8.2e-12  Score=105.44  Aligned_cols=244  Identities=9%  Similarity=0.122  Sum_probs=181.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEe-CCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC-
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYD-TDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK-  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~-~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~-  115 (444)
                      +|...|+....- |...-+++.+.|.+++||- ...++.-..+. +....++.++  .+....|++|-..|++.-+.+. 
T Consensus        22 G~~d~vn~~~l~-~~e~gv~~~s~drtvrv~lkrds~q~wpsI~-~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~se   99 (404)
T KOG1409|consen   22 GSQDDVNAAILI-PKEEGVISVSEDRTVRVWLKRDSGQYWPSIY-HYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSE   99 (404)
T ss_pred             Cchhhhhhheec-cCCCCeEEccccceeeeEEeccccccCchhh-hhCCCCceEeeeeccceEEEEEEecceEEEEEhhh
Confidence            899999998888 6788999999999999995 34455444432 2224445554  4566789999999999988754 


Q ss_pred             ---CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         116 ---TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       116 ---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                         .....+....|...+..+-|+....++++.+.|..+.---.+.+..+-......                   +.++
T Consensus       100 dfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~-------------------~~t~  160 (404)
T KOG1409|consen  100 DFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFET-------------------PASA  160 (404)
T ss_pred             hhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeec-------------------cCCC
Confidence               344455677899999999999988999999998877654444444332111100                   1122


Q ss_pred             EEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         193 ISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       193 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      +.+.-  .+...|...|.|.+..+. .....++.++.+|...+++++|.|....|++|..|..+.+||+--.....+.+.
T Consensus       161 ~~~d~--~~~fvGd~~gqvt~lr~~-~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~  237 (404)
T KOG1409|consen  161 LQFDA--LYAFVGDHSGQITMLKLE-QNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQ  237 (404)
T ss_pred             Cceee--EEEEecccccceEEEEEe-ecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeec
Confidence            22221  155566667777776665 446788899999999999999999999999999999999999986234556778


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      +|...|..+..-+.-+.|++++.||.|.+|+.+..
T Consensus       238 gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  238 GHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             cchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence            99999999988888889999999999999998653

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=8.7e-11  Score=110.80  Aligned_cols=229  Identities=10%  Similarity=0.006  Sum_probs=134.6

Q ss_pred             eEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEEecC---CcEEEEEcCCCCccccccccCCCeEEEEEeccCC
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTAVKS---GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  140 (444)
                      .|.++|....... .+.  .+...+  ..++|+|+.|+..+..   ..|++|++.+++... +..........+|+|+++
T Consensus       199 ~l~i~d~dG~~~~-~l~--~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~  274 (448)
T PRK04792        199 QLMIADYDGYNEQ-MLL--RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGK  274 (448)
T ss_pred             EEEEEeCCCCCce-Eee--cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCC
Confidence            5677776544332 222  223333  4679999988876543   358889998876543 322333445789999999


Q ss_pred             EEEE-eeCCCe--EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc--eEEEE
Q psy8152         141 IIAT-GGKEND--LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG--YVRVY  214 (444)
Q Consensus       141 ~l~~-~~~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~i~  214 (444)
                      .|+. .+.++.  |.++|+.+++.. .+..+..                  .....+|+|+++.|+..+. ++  .|+++
T Consensus       275 ~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~------------------~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~  335 (448)
T PRK04792        275 KLALVLSKDGQPEIYVVDIATKALT-RITRHRA------------------IDTEPSWHPDGKSLIFTSERGGKPQIYRV  335 (448)
T ss_pred             EEEEEEeCCCCeEEEEEECCCCCeE-ECccCCC------------------CccceEECCCCCEEEEEECCCCCceEEEE
Confidence            8775 455564  777788776543 2222222                  3567899999987766543 33  46666


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC-CC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST-TG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      ++.   ... ...+..........+|+|+|++|+..+. .+  .|.++|+.+ ++. ..+... .......|+|+|+.|+
T Consensus       336 dl~---~g~-~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~-g~~-~~lt~~-~~d~~ps~spdG~~I~  408 (448)
T PRK04792        336 NLA---SGK-VSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLET-GAM-QVLTST-RLDESPSVAPNGTMVI  408 (448)
T ss_pred             ECC---CCC-EEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCC-CCe-EEccCC-CCCCCceECCCCCEEE
Confidence            766   222 2222222222345789999999887554 33  456678776 543 333322 1223458999999777


Q ss_pred             EEECC-C--cEEEEEcCCCceEEEee-cCCceeEEEEc
Q psy8152         292 SVSLD-R--HFRVHDFHSKKLLRKDY-MQSRLTSILVR  325 (444)
Q Consensus       292 s~~~d-g--~i~vw~~~~~~~~~~~~-~~~~i~~~~~~  325 (444)
                      ..+.. +  .|++++.. +.....+. ..+.+...+|+
T Consensus       409 ~~~~~~g~~~l~~~~~~-G~~~~~l~~~~g~~~~p~Ws  445 (448)
T PRK04792        409 YSTTYQGKQVLAAVSID-GRFKARLPAGQGEVKSPAWS  445 (448)
T ss_pred             EEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccC
Confidence            65543 3  36777764 44444443 23344444433

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.45  E-value=1.3e-09  Score=99.54  Aligned_cols=264  Identities=12%  Similarity=0.110  Sum_probs=161.4

Q ss_pred             CCcccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCC-Ccc
Q psy8152           4 ADDYNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDTDF-KNF   77 (444)
Q Consensus         4 ~~~~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~-~~~   77 (444)
                      +++++|++...    .|.|..|.+.........+....  ........++++ +++++|+++.. +|.|.++++.. +.+
T Consensus        46 ~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~--~~g~~p~~i~~~-~~g~~l~vany~~g~v~v~~l~~~g~l  122 (345)
T PF10282_consen   46 PDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVP--SGGSSPCHIAVD-PDGRFLYVANYGGGSVSVFPLDDDGSL  122 (345)
T ss_dssp             TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEE--ESSSCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTSEE
T ss_pred             eCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeec--cCCCCcEEEEEe-cCCCEEEEEEccCCeEEEEEccCCccc
Confidence            34566666655    57899998876521122222222  134556779999 79999998875 79999999976 443


Q ss_pred             ccceeecc-------------ccccEEEEEeCCCeEEEEec-CCcEEEEEcCCCC--ccc---cccccCCCeEEEEEecc
Q psy8152          78 NTNTDVSF-------------GEGDIVGVSRYDECILTAVK-SGDVKLWRYKTEP--DQW---TNFNVGPQLECMKHNKH  138 (444)
Q Consensus        78 ~~~~~~~~-------------~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~--~~~---~~~~~~~~v~~~~~~~~  138 (444)
                      ........             .......++|+++++++... ...|++|++....  ...   ...........++|+|+
T Consensus       123 ~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pd  202 (345)
T PF10282_consen  123 GEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPD  202 (345)
T ss_dssp             EEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TT
T ss_pred             ceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCC
Confidence            33221110             01123456899998777643 4579999987665  211   12345667899999999


Q ss_pred             CCEEEEee-CCCeEEEEEcC--Ccee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEE
Q psy8152         139 SNIIATGG-KENDLKLWDLN--TTKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVR  212 (444)
Q Consensus       139 ~~~l~~~~-~d~~i~vwd~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~  212 (444)
                      ++++++.. .++.|.++++.  .+..  +..+...          |..  .........|+++|++++|.++. ....|.
T Consensus       203 g~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~----------~~~--~~~~~~~~~i~ispdg~~lyvsnr~~~sI~  270 (345)
T PF10282_consen  203 GKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTL----------PEG--FTGENAPAEIAISPDGRFLYVSNRGSNSIS  270 (345)
T ss_dssp             SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESC----------ETT--SCSSSSEEEEEE-TTSSEEEEEECTTTEEE
T ss_pred             cCEEEEecCCCCcEEEEeecccCCceeEEEEeeec----------ccc--ccccCCceeEEEecCCCEEEEEeccCCEEE
Confidence            98886655 57889999988  3321  2222111          110  01112578899999998877654 567899


Q ss_pred             EEEcC-CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc-CCCcEEEEEcC--CCCcceeEec-cccCceeEEEe
Q psy8152         213 VYDPK-ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS-TTGDMMAVDLR--GKGKPCYKYK-GFAGCVKDIAC  283 (444)
Q Consensus       213 i~d~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~~~~~~~~~-~h~~~i~~~~~  283 (444)
                      +|++. .++....+..+.......+.++++|+|++|+++. .++.|.+|++.  + +.+...-. ..-....||.|
T Consensus       271 vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~t-G~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  271 VFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDT-GKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEEESSSEEEEEE
T ss_pred             EEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCC-CcEEEecccccCCCCEEEeC
Confidence            99995 1233445555554455578999999999998865 56789999874  4 44333322 12234456655

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2314|consensus

Probab=99.43  E-value=9.4e-11  Score=105.19  Aligned_cols=308  Identities=9%  Similarity=0.026  Sum_probs=195.7

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-----------CCeEEEEeCC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-----------GQKIKIYDTD   73 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-----------d~~i~vw~~~   73 (444)
                      .+.+|++-...| |.+|--       ..+..++.+.|. .|.-+.|| |..+||+|-+.           ...++|||+.
T Consensus       221 ~GTYL~t~Hk~G-I~lWGG-------~~f~r~~RF~Hp-~Vq~idfS-P~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  221 KGTYLVTFHKQG-IALWGG-------ESFDRIQRFYHP-GVQFIDFS-PNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             CceEEEEEeccc-eeeecC-------ccHHHHHhccCC-CceeeecC-CccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            445666655554 467752       234555666675 57889999 79999999543           2579999999


Q ss_pred             CCccccceeeccc---cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC---
Q psy8152          74 FKNFNTNTDVSFG---EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK---  147 (444)
Q Consensus        74 ~~~~~~~~~~~~~---~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---  147 (444)
                      +|...+.|.+...   .-++..+|.+++++|--.. ..|.||...+..++..-.-.-..|....|+|.+++||.=+.   
T Consensus       291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~  369 (698)
T KOG2314|consen  291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETN  369 (698)
T ss_pred             ccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEccccc
Confidence            9999999876432   3455677899999987766 48999987765444322223557889999999888875432   


Q ss_pred             --CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE----------eCCceEEEEE
Q psy8152         148 --ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC----------SKQGYVRVYD  215 (444)
Q Consensus       148 --d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----------~~d~~i~i~d  215 (444)
                        -..+.+..+.+++.+.+...+.-                  .=..+.|-.+|.+|+.-          +.-..+.|+.
T Consensus       370 ~~parvtL~evPs~~~iRt~nlfnV------------------sDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfr  431 (698)
T KOG2314|consen  370 NIPARVTLMEVPSKREIRTKNLFNV------------------SDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFR  431 (698)
T ss_pred             CCcceEEEEecCccceeeeccceee------------------eccEEEeccCCcEEEEEEEeeccccccceEeeEEEEE
Confidence              23455666665555544332221                  12234566667777642          2223566777


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc---CCCcEEEEEcCC-C--CcceeEeccccCceeEEEecCCCCE
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS---TTGDMMAVDLRG-K--GKPCYKYKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~iwd~~~-~--~~~~~~~~~h~~~i~~~~~s~~~~~  289 (444)
                      ++  ....++..+. -...|...+|-|.|..+++-+   ...++.+|-+.+ +  ..++..+.  ....+.+.|+|.|++
T Consensus       432 ir--eKdIpve~ve-lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~f  506 (698)
T KOG2314|consen  432 IR--EKDIPVEVVE-LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRF  506 (698)
T ss_pred             ee--ccCCCceeee-cchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcE
Confidence            77  3444555444 345688899999998777633   235688888873 1  23344444  355688999999998


Q ss_pred             EEEEE---CCCcEEEEEcCCCceEE--EeecCCceeEEEEcCCCcccccchhhhhcccccc------CCCccccCCCc
Q psy8152         290 ILSVS---LDRHFRVHDFHSKKLLR--KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEK------GDSDEKYDPEH  356 (444)
Q Consensus       290 l~s~~---~dg~i~vw~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~------d~~i~~W~~~~  356 (444)
                      ++.+.   ..|.+.++|+.-..+..  ...|. ..+.+.|.         |.|+++++++.      |..-++|++.+
T Consensus       507 vvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~-~at~veWD---------PtGRYvvT~ss~wrhk~d~GYri~tfqG  574 (698)
T KOG2314|consen  507 VVVAALVSRRGDLEFYDTDYADLKDTASPEHF-AATEVEWD---------PTGRYVVTSSSSWRHKVDNGYRIFTFQG  574 (698)
T ss_pred             EEEEEecccccceEEEecchhhhhhccCcccc-ccccceEC---------CCCCEEEEeeehhhhccccceEEEEeec
Confidence            88764   56889999987533222  11121 22344443         66788887753      45566776654

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.43  E-value=1.3e-10  Score=108.18  Aligned_cols=259  Identities=12%  Similarity=0.135  Sum_probs=165.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++..+++++.+|.|+.++..+++..    ....   ....+.+....  .+..++.++.++.|+.||..+|+.+..+...
T Consensus       104 ~~~~v~v~~~~g~l~ald~~tG~~~----W~~~---~~~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~  174 (377)
T TIGR03300       104 DGGLVFVGTEKGEVIALDAEDGKEL----WRAK---LSSEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRV  174 (377)
T ss_pred             cCCEEEEEcCCCEEEEEECCCCcEe----eeec---cCceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccC
Confidence            4567889999999999999888742    1111   11222221111  2457777888999999999999987766432


Q ss_pred             cccccEE---EEEeCCCeEEEEecCCcEEEEEcCCCCccccccc-cCC------CeEEEEEec--cCCEEEEeeCCCeEE
Q psy8152          85 FGEGDIV---GVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN-VGP------QLECMKHNK--HSNIIATGGKENDLK  152 (444)
Q Consensus        85 ~~~~~v~---~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~------~v~~~~~~~--~~~~l~~~~~d~~i~  152 (444)
                      .......   .....+..++.+..++.+..+|+.+++.++.... ...      .+..+.-+|  .+..+++++.+|.++
T Consensus       175 ~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~  254 (377)
T TIGR03300       175 TPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVA  254 (377)
T ss_pred             CCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEE
Confidence            2110000   0011235677888889999999999987653211 000      001111112  356788888899999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-  231 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-  231 (444)
                      .||..+++.+...... .                   .....  ..+..+++++.+|.|..+|..   .++.+...... 
T Consensus       255 a~d~~tG~~~W~~~~~-~-------------------~~~p~--~~~~~vyv~~~~G~l~~~d~~---tG~~~W~~~~~~  309 (377)
T TIGR03300       255 ALDLRSGRVLWKRDAS-S-------------------YQGPA--VDDNRLYVTDADGVVVALDRR---SGSELWKNDELK  309 (377)
T ss_pred             EEECCCCcEEEeeccC-C-------------------ccCce--EeCCEEEEECCCCeEEEEECC---CCcEEEcccccc
Confidence            9999999887665421 1                   11222  235678888899999999998   56655544221 


Q ss_pred             CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEEEEECCCcEEEE
Q psy8152         232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      .....+...  .+..|++++.+|.|+++|..+ ++.+.+++.+...+.. .++. + ..|+.++.||.|+.|
T Consensus       310 ~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~t-G~~~~~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       310 YRQLTAPAV--VGGYLVVGDFEGYLHWLSRED-GSFVARLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             CCccccCEE--ECCEEEEEeCCCEEEEEECCC-CCEEEEEEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence            112222222  366889999999999999999 9999988865543322 2332 3 458888999999876

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1064|consensus

Probab=99.39  E-value=1.6e-12  Score=130.68  Aligned_cols=222  Identities=9%  Similarity=0.073  Sum_probs=173.5

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEee
Q psy8152          97 DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS  176 (444)
Q Consensus        97 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  176 (444)
                      ++.+..+..++...-|..+.+...  +..+-..|.++.-+|...+.++|+.||.+++|....++.+..++....      
T Consensus      2180 s~~~~~~n~~~~~~tq~~~~~~~~--~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~------ 2251 (2439)
T KOG1064|consen 2180 SNRFTPSNLPWLGSTQTSRGASVM--IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN------ 2251 (2439)
T ss_pred             cccCCcccCCccccceecccceeE--eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc------
Confidence            344555555666666665543333  445566788999899888999999999999999998888877765443      


Q ss_pred             eCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE---cCC
Q psy8152         177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG---STT  253 (444)
Q Consensus       177 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~d  253 (444)
                                 ..|+.+.|+.+|+.+..+..||.+.+|.+.    .++....+.|....+...|-.  ..++++   +.+
T Consensus      2252 -----------s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~----pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~ 2314 (2439)
T KOG1064|consen 2252 -----------SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS----PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDN 2314 (2439)
T ss_pred             -----------chhhhhhhcccCCceeeeccCCceeecccC----CcceeccccCCccccceeeee--hhhhccccCCCC
Confidence                       369999999999999999999999999987    788888899998888888864  566764   456


Q ss_pred             CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCccccc
Q psy8152         254 GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENE  333 (444)
Q Consensus       254 g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  333 (444)
                      +.+.+||...++..-..-..|.+.++++++.|..++|++||.+|.|++||++..++++++..        +         
T Consensus      2315 ~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--------~--------- 2377 (2439)
T KOG1064|consen 2315 RNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--------L--------- 2377 (2439)
T ss_pred             CcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--------h---------
Confidence            88999997653332222267999999999999999999999999999999998888765442        1         


Q ss_pred             chhhhhccccccCCCccccCCCcccccc
Q psy8152         334 TKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       334 ~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                       ....++++++..|.++||++....+..
T Consensus      2378 -~~~~~f~~~ss~g~ikIw~~s~~~ll~ 2404 (2439)
T KOG1064|consen 2378 -DTREYFVTGSSEGNIKIWRLSEFGLLH 2404 (2439)
T ss_pred             -hhhheeeccCcccceEEEEccccchhh
Confidence             113678899999999999998765443

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.35  E-value=2e-09  Score=95.17  Aligned_cols=181  Identities=12%  Similarity=0.071  Sum_probs=130.0

Q ss_pred             cCCCcEEEEEcCCCccceeeee-eec-cc---CcccceEEEe-eeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQ-NVK-YI---TNKASVLALN-WGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~-~~~-~~---~h~~~v~~~~-~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      +..|.|++||..+.......+. .+. ..   ..-.+..-+. |++.++++++..|. |...|.+...+-.++.    ++
T Consensus       284 q~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~iqv----~~  358 (668)
T COG4946         284 QNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSIQV----GK  358 (668)
T ss_pred             ecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeEEc----CC
Confidence            5567899999888764211111 111 00   0111222222 55567899999988 7888887766655544    44


Q ss_pred             cccE--EEEEeCCCeEEEEecCC-cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          87 EGDI--VGVSRYDECILTAVKSG-DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        87 ~~~v--~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      ...|  ..+..++.-++.|..|| .+-|++..+++... +...-+.|.++..+|+|++++.+.....|.+.|+.+++...
T Consensus       359 ~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr-~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~  437 (668)
T COG4946         359 KGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKR-IEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRL  437 (668)
T ss_pred             CCceEEEEEccCCcceEEeccCCceEEEEecCCceEEE-eeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeE
Confidence            4444  34556677889999999 89999999888663 66677889999999999999999999999999999987654


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc----eEEEEEcC
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG----YVRVYDPK  217 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~  217 (444)
                      .-+....                  -|+.+.|||++++||-+--+|    .|++||+.
T Consensus       438 idkS~~~------------------lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~  477 (668)
T COG4946         438 IDKSEYG------------------LITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMD  477 (668)
T ss_pred             ecccccc------------------eeEEEEEcCCceeEEEecCcceeeeeEEEEecC
Confidence            4333333                  599999999999999776555    68999988

>KOG4532|consensus

Probab=99.34  E-value=4.2e-10  Score=92.12  Aligned_cols=197  Identities=11%  Similarity=0.006  Sum_probs=135.0

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec----cCCEEEEeeCCCeEEEEEcCCceeeeeeeccccee
Q psy8152          97 DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK----HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus        97 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      -.+|+.|+..|...+|...+.+...  ......+..+.+..    ...-+..++.|.++++.++..+..-.......-  
T Consensus        84 c~~la~gG~~g~fd~~~~~tn~~h~--~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~--  159 (344)
T KOG4532|consen   84 CVTLADGGASGQFDLFACNTNDGHL--YQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNL--  159 (344)
T ss_pred             ccEEEeccccceeeeecccCcccce--eeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecccc--
Confidence            4578999999999999988766542  11122222222221    223466778888888888876433222221111  


Q ss_pred             eEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE-EEeCCCCCeeEEEEccCCCEEEEEc
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL-KVDIPDVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~  251 (444)
                                      .+.+++++++++++++.+....|..|.+. ......+. ........-.+..|+.....+|+++
T Consensus       160 ----------------~~ns~~~snd~~~~~~Vgds~~Vf~y~id-~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~  222 (344)
T KOG4532|consen  160 ----------------TQNSLHYSNDPSWGSSVGDSRRVFRYAID-DESEYIENIYEAPTSDHGFYNSFSENDLQFAVVF  222 (344)
T ss_pred             ----------------ceeeeEEcCCCceEEEecCCCcceEEEeC-CccceeeeeEecccCCCceeeeeccCcceEEEEe
Confidence                            37889999999999999999999999998 22223333 2223334456788999999999999


Q ss_pred             CCCcEEEEEcCCCCcceeEe----ccccCceeEEEecCCCC--EEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         252 TTGDMMAVDLRGKGKPCYKY----KGFAGCVKDIACPLNEN--LILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       252 ~dg~i~iwd~~~~~~~~~~~----~~h~~~i~~~~~s~~~~--~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .||++.|||++..+.+....    +.|.+.+..+.|+|.|.  +|+-.-.-+.+.+-|+++++-...+.
T Consensus       223 Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~  291 (344)
T KOG4532|consen  223 QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV  291 (344)
T ss_pred             cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence            99999999999844444333    25899999999998774  55554556789999999977655543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.32  E-value=2.3e-09  Score=108.51  Aligned_cols=275  Identities=15%  Similarity=0.185  Sum_probs=170.2

Q ss_pred             CcccEEEecCCCcEEEE----EcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC-------
Q psy8152           5 DDYNIYIGSSTGAFKGV----NLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-------   73 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~----~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-------   73 (444)
                      +...++++..+|.|.++    +.....     +..+.  .-...|.|++|| ||+..|+..+.+++|.+-...       
T Consensus        86 d~~~l~~~~~~Gdi~~~~~~~~~~~~~-----~E~VG--~vd~GI~a~~WS-PD~Ella~vT~~~~l~~mt~~fd~i~E~  157 (928)
T PF04762_consen   86 DSESLCIALASGDIILVREDPDPDEDE-----IEIVG--SVDSGILAASWS-PDEELLALVTGEGNLLLMTRDFDPISEV  157 (928)
T ss_pred             CCCcEEEEECCceEEEEEccCCCCCce-----eEEEE--EEcCcEEEEEEC-CCcCEEEEEeCCCEEEEEeccceEEEEe
Confidence            45678888999999999    444333     33333  336899999999 899999999998888876421       


Q ss_pred             --------C--------Cccccceeecc----------------------ccccEEEEE--eCCCeEEEEec------CC
Q psy8152          74 --------F--------KNFNTNTDVSF----------------------GEGDIVGVS--RYDECILTAVK------SG  107 (444)
Q Consensus        74 --------~--------~~~~~~~~~~~----------------------~~~~v~~~s--~~~~~l~~~~~------dg  107 (444)
                              .        |+....|...+                      ....-..++  .||.++|+.+.      -.
T Consensus       158 ~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R  237 (928)
T PF04762_consen  158 PLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRR  237 (928)
T ss_pred             ecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCcee
Confidence                    0        11111221111                      011222334  58899888765      25


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      .++||+-+ |..........+--.+++|-|.|++||+...   ...|.+|.-+ |-.-..+....        .|     
T Consensus       238 ~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~--------~~-----  302 (928)
T PF04762_consen  238 VIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRF--------DP-----  302 (928)
T ss_pred             EEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCC--------CC-----
Confidence            78999865 5544333333444567899999999998765   3456666543 22221111110        00     


Q ss_pred             cCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-CCCeeEEEEccC-CCEEEEEcCCCcEEEEEcC
Q psy8152         185 RRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-DVALSCITTTNQ-SHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~  262 (444)
                       ....|..++|++++..||....+. |.+|-.. +...-..+.+... ...+..+.|+|. ...|...+.+|.+..+++.
T Consensus       303 -~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~-NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~  379 (928)
T PF04762_consen  303 -EEEKVIELAWNSDSEILAVWLEDR-VQLWTRS-NYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFA  379 (928)
T ss_pred             -CCceeeEEEECCCCCEEEEEecCC-ceEEEee-CCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEE
Confidence             122589999999999999977665 9999987 2222333333322 233455899985 4456666665666554432


Q ss_pred             ----C-C--------------Cc--------------c--eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         263 ----G-K--------------GK--------------P--CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       263 ----~-~--------------~~--------------~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                          . +              |.              |  ...+. ...+|.+++|++++..+++...||.|.+|....
T Consensus       380 ~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~  457 (928)
T PF04762_consen  380 WDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDL  457 (928)
T ss_pred             EEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEc-CCCCcEEEEEeCCCCeEEEEECCCCEEEEEecC
Confidence                1 0              00              0  11111 346899999999988899999999999998544

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.31  E-value=4.4e-09  Score=108.47  Aligned_cols=256  Identities=11%  Similarity=0.011  Sum_probs=157.4

Q ss_pred             EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc--------------cccEEEEEeCCCeEEEEe-cCCcEE
Q psy8152          46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG--------------EGDIVGVSRYDECILTAV-KSGDVK  110 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~--------------~~~v~~~s~~~~~l~~~~-~dg~i~  110 (444)
                      ..+++++.++..+++-+..+.|++|+.. +..+..+...+.              ...-+++.++++.|+++. ..+.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            4577873345566666778999999986 443333221010              112245566677655554 457799


Q ss_pred             EEEcCCCCcccccccc-----------------CCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeeccccee
Q psy8152         111 LWRYKTEPDQWTNFNV-----------------GPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus       111 iw~~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      ++++.++... ++.+.                 -.....++|+| ++.++++.+.++.|++|+..++... .+.+.... 
T Consensus       650 ~id~~~~~V~-tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~-  726 (1057)
T PLN02919        650 EIDFVNETVR-TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYE-  726 (1057)
T ss_pred             EEecCCCEEE-EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCcc-
Confidence            9998765432 11110                 12346899999 6667777778899999998876542 22111100 


Q ss_pred             eEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceE-----------EEeCC--------C
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVL-----------KVDIP--------D  232 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-----------~~~~~--------~  232 (444)
                        ............-.....|+++|+++ ++++-+.++.|++||+. +.....+.           .+-..        -
T Consensus       727 --~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~-tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l  803 (1057)
T PLN02919        727 --RNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLK-TGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLL  803 (1057)
T ss_pred             --ccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECC-CCcEEEEEecccccCcccccccCCCCchhhhhc
Confidence              00000000000112367899999997 55566778999999987 11111100           00000        1


Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-------------cccCceeEEEecCCCCEEEEEECCCcE
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-------------GFAGCVKDIACPLNENLILSVSLDRHF  299 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------~h~~~i~~~~~s~~~~~l~s~~~dg~i  299 (444)
                      .....++++++|+++++-+.++.|++||..+ +.......             +.-.....|+++++|+++++-+.++.|
T Consensus       804 ~~P~Gvavd~dG~LYVADs~N~rIrviD~~t-g~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I  882 (1057)
T PLN02919        804 QHPLGVLCAKDGQIYVADSYNHKIKKLDPAT-KRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI  882 (1057)
T ss_pred             cCCceeeEeCCCcEEEEECCCCEEEEEECCC-CeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence            1235889999999888899999999999987 54432221             112246789999999998888899999


Q ss_pred             EEEEcCCCce
Q psy8152         300 RVHDFHSKKL  309 (444)
Q Consensus       300 ~vw~~~~~~~  309 (444)
                      ++|++.+++.
T Consensus       883 rvid~~~~~~  892 (1057)
T PLN02919        883 RYLDLNKGEA  892 (1057)
T ss_pred             EEEECCCCcc
Confidence            9999998765

>KOG0309|consensus

Probab=99.31  E-value=2.8e-11  Score=111.99  Aligned_cols=274  Identities=15%  Similarity=0.172  Sum_probs=176.2

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-cCCcEEEEEEcCCeEEEEeCCCC-ccccceeec
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-VEESELLIAYSGQKIKIYDTDFK-NFNTNTDVS   84 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~~~~~d~~i~vw~~~~~-~~~~~~~~~   84 (444)
                      ..++.++.-| +++.++...-.+..-+..+.    .=.|-.+.|+| +-..+-++......-.+|++... .....|.++
T Consensus        37 rdi~lAsr~g-l~i~dld~p~~ppr~l~h~t----pw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lh  111 (1081)
T KOG0309|consen   37 RDIVLASRQG-LYIIDLDDPFTPPRWLHHIT----PWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLH  111 (1081)
T ss_pred             chhhhhhhcC-eEEEeccCCCCCceeeeccC----cchhcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEe
Confidence            3445555444 45666655443222222111    23456677875 23344455555566778998643 233345668


Q ss_pred             cccccEEEEEeCC---CeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152          85 FGEGDIVGVSRYD---ECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        85 ~~~~~v~~~s~~~---~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      +|...++.+.+++   ..+++++.|-.+..||+++... +.....-......++|+. +++.+|+ +..+.|++||++.+
T Consensus       112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~g  190 (1081)
T KOG0309|consen  112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKG  190 (1081)
T ss_pred             cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCC
Confidence            9999999986554   4699999999999999987643 333333455677899998 5555554 55678999999984


Q ss_pred             -eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         160 -KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                       .++..++++-.                  .|+.+.|...- ..+.+++.|++|+.|+... .....-+ ......+|..
T Consensus       191 s~pl~s~K~~vs------------------~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k-St~e~~~-~vtt~~piw~  250 (1081)
T KOG0309|consen  191 STPLCSLKGHVS------------------SVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK-STTESKR-TVTTNFPIWR  250 (1081)
T ss_pred             CcceEEecccce------------------eeehHHHhhhhhhhhcccCCCCceeeecccc-cccccce-eccccCccee
Confidence             57778877655                  68888887544 6788999999999999881 1112222 2234556666


Q ss_pred             EEEccCCC--EEEEEcCCCcEE---------EEEcCCCCcceeEeccccCceeEEEecCC--------C--CEEEEEECC
Q psy8152         238 ITTTNQSH--YVIVGSTTGDMM---------AVDLRGKGKPCYKYKGFAGCVKDIACPLN--------E--NLILSVSLD  296 (444)
Q Consensus       238 ~~~~~~~~--~l~~~~~dg~i~---------iwd~~~~~~~~~~~~~h~~~i~~~~~s~~--------~--~~l~s~~~d  296 (444)
                      -.+.|-|.  ++.-.-.+..+.         .|+..+..+++++|.||...|....|-..        .  -.|++=+.|
T Consensus       251 ~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD  330 (1081)
T KOG0309|consen  251 GRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKD  330 (1081)
T ss_pred             ccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecC
Confidence            66666433  222111111333         34444446789999999998877766432        1  279999999


Q ss_pred             CcEEEEEcCC
Q psy8152         297 RHFRVHDFHS  306 (444)
Q Consensus       297 g~i~vw~~~~  306 (444)
                      ..+++|-+.+
T Consensus       331 ~~lrlWpI~~  340 (1081)
T KOG0309|consen  331 QTLRLWPIDS  340 (1081)
T ss_pred             CceEeeeccH
Confidence            9999998865

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.31  E-value=4.3e-08  Score=84.32  Aligned_cols=244  Identities=7%  Similarity=0.118  Sum_probs=157.2

Q ss_pred             CcccEEEecC---CCcEEEEEcCC--Cccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcC-CeEEEEeCCC-Cc
Q psy8152           5 DDYNIYIGSS---TGAFKGVNLSK--DKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSG-QKIKIYDTDF-KN   76 (444)
Q Consensus         5 ~~~~l~~g~~---dg~i~i~~~~~--~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d-~~i~vw~~~~-~~   76 (444)
                      +++.|+++..   .|.|..|.+..  ++.     ..+... .-..+-+.++++ +++++|+++... |.|.++-++. |.
T Consensus        50 ~~~~LY~v~~~~~~ggvaay~iD~~~G~L-----t~ln~~~~~g~~p~yvsvd-~~g~~vf~AnY~~g~v~v~p~~~dG~  123 (346)
T COG2706          50 DQRHLYVVNEPGEEGGVAAYRIDPDDGRL-----TFLNRQTLPGSPPCYVSVD-EDGRFVFVANYHSGSVSVYPLQADGS  123 (346)
T ss_pred             CCCEEEEEEecCCcCcEEEEEEcCCCCeE-----EEeeccccCCCCCeEEEEC-CCCCEEEEEEccCceEEEEEcccCCc
Confidence            3456666644   57788888765  442     222222 122333889999 799999988764 8999999865 54


Q ss_pred             cccceeecccccc------------EEEEEeCCCeEEEEec-CCcEEEEEcCCCCccc---cccccCCCeEEEEEeccCC
Q psy8152          77 FNTNTDVSFGEGD------------IVGVSRYDECILTAVK-SGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        77 ~~~~~~~~~~~~~------------v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~  140 (444)
                      +........|...            ...+.|++++|++... --.|.+|++..++...   ....-...-+.|.|+|+++
T Consensus       124 l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k  203 (346)
T COG2706         124 LQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGK  203 (346)
T ss_pred             cccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCc
Confidence            4443332233222            2345799999888754 2479999999776553   1223466788999999999


Q ss_pred             EEEEeeC-CCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcC
Q psy8152         141 IIATGGK-ENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPK  217 (444)
Q Consensus       141 ~l~~~~~-d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~  217 (444)
                      +.+..+. +++|.+|..... ..+..++.+       ..-|..  .....+...|..+|+|++|.++.. ...|.+|.+.
T Consensus       204 ~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i-------~tlP~d--F~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~  274 (346)
T COG2706         204 YAYLVNELNSTVDVLEYNPAVGKFEELQTI-------DTLPED--FTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVD  274 (346)
T ss_pred             EEEEEeccCCEEEEEEEcCCCceEEEeeee-------ccCccc--cCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEc
Confidence            8887664 899999999873 222222211       112222  122336788999999999988754 3478888887


Q ss_pred             CC-CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-CcEEEEEcCC
Q psy8152         218 IT-TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-GDMMAVDLRG  263 (444)
Q Consensus       218 ~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~~  263 (444)
                      .. +....+.....+....+...|+|.+++|+++..+ .+|.+|.+..
T Consensus       275 ~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~  322 (346)
T COG2706         275 PDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDK  322 (346)
T ss_pred             CCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcC
Confidence            11 1122222233444446789999999999987765 4688887654

>KOG2041|consensus

Probab=99.31  E-value=2.3e-10  Score=105.85  Aligned_cols=263  Identities=10%  Similarity=0.086  Sum_probs=181.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc-------------cceeeccccccEEEEEeC--CCeEEEEe
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN-------------TNTDVSFGEGDIVGVSRY--DECILTAV  104 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~-------------~~~~~~~~~~~v~~~s~~--~~~l~~~~  104 (444)
                      +......|+.|+ .+..++++|+.||.++|..+.+...-             ..-.+.+|...|.-+.++  .+.|-+..
T Consensus        12 PnnvkL~c~~WN-ke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD   90 (1189)
T KOG2041|consen   12 PNNVKLHCAEWN-KESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD   90 (1189)
T ss_pred             CCCceEEEEEEc-ccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC
Confidence            446778999999 79999999999999999987643211             111234778887777664  56688888


Q ss_pred             cCCcEEEEEcCCCCcccccc--ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152         105 KSGDVKLWRYKTEPDQWTNF--NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      .+|.|.+|-+-.+.....+.  ...+-|.+++|+.+|..++..-.||.|.+=.+...+ ++.-.....            
T Consensus        91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR-IwgKeLkg~------------  157 (1189)
T KOG2041|consen   91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR-IWGKELKGQ------------  157 (1189)
T ss_pred             CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce-ecchhcchh------------
Confidence            99999999998887665333  356779999999999999999999999887776432 221111111            


Q ss_pred             cccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC----ccceEE----EeCCCCCeeEEEEc--------cCCCE
Q psy8152         183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ----RRPVLK----VDIPDVALSCITTT--------NQSHY  246 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~----~~~~~~~i~~~~~~--------~~~~~  246 (444)
                            ....+.|+++.+.++.+-.+|.+++||....-.    ..+...    +......|..+.|.        |+...
T Consensus       158 ------~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~  231 (1189)
T KOG2041|consen  158 ------LLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPR  231 (1189)
T ss_pred             ------eccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCE
Confidence                  256789999998888888899999999871100    111111    11122335566663        46778


Q ss_pred             EEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC---------CcEEEEEcCCCceEEEeec-C
Q psy8152         247 VIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD---------RHFRVHDFHSKKLLRKDYM-Q  316 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d---------g~i~vw~~~~~~~~~~~~~-~  316 (444)
                      |+++..+|.+.|..-.+...|+..-.+  -.|..+.|+++|..|+.++.+         +.|.+|.. -|+.+.++.. .
T Consensus       232 lavcy~nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg  308 (1189)
T KOG2041|consen  232 LAVCYANGRMQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPG  308 (1189)
T ss_pred             EEEEEcCceehhhhhcCCCCCeEEecc--cEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCC
Confidence            999999999988765552333322222  568889999999999998864         24555543 3666666664 3


Q ss_pred             CceeEEEEc
Q psy8152         317 SRLTSILVR  325 (444)
Q Consensus       317 ~~i~~~~~~  325 (444)
                      ..|+++.|-
T Consensus       309 ~~It~lsWE  317 (1189)
T KOG2041|consen  309 SCITGLSWE  317 (1189)
T ss_pred             ceeeeeEEc
Confidence            457777774

>KOG4532|consensus

Probab=99.28  E-value=1.1e-09  Score=89.71  Aligned_cols=235  Identities=9%  Similarity=-0.050  Sum_probs=149.7

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ..+|+.|+..|.+.+|...+.+...+...     .|...|+-+.=.-.....+..++.|.++++.++..+..........
T Consensus        84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd-----~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~  158 (344)
T KOG4532|consen   84 CVTLADGGASGQFDLFACNTNDGHLYQCD-----VSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQN  158 (344)
T ss_pred             ccEEEeccccceeeeecccCcccceeeec-----ccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccc
Confidence            36799999999999999987764211111     3444333322110234567788999999999987555444432211


Q ss_pred             ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc-c-c-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-e
Q psy8152          86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-Q-W-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-N  161 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~  161 (444)
                      -...-.+++++++++++.+....|..|.+..... + . ........-.+..|+.....+|++..||++.|||++... +
T Consensus       159 ~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp  238 (344)
T KOG4532|consen  159 LTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP  238 (344)
T ss_pred             cceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc
Confidence            1233355688999999999999999999875422 1 1 122344556788999988999999999999999999843 2


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEe-------CCC
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVD-------IPD  232 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~  232 (444)
                      .........              .+.+.++.+.|++.|  .+|+..-.-+.+.+.|++   ..+-...+.       .|.
T Consensus       239 m~~~sstrp--------------~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R---~~~~~q~I~i~~d~~~~~~  301 (344)
T KOG4532|consen  239 MAEISSTRP--------------HHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR---NYVNHQVIVIPDDVERKHN  301 (344)
T ss_pred             hhhhcccCC--------------CCCCceEEEEecCCCcceEEEEecCcceEEEEEcc---cCceeeEEecCcccccccc
Confidence            222211111              134579999999877  566666667899999999   443333222       222


Q ss_pred             -CCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         233 -VALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       233 -~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                       ..|....|+.++.-+.+.+.+ .+.-|++.+
T Consensus       302 tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~s  332 (344)
T KOG4532|consen  302 TQHIFGTNFNNENESNDVKNEL-QGAEYNILS  332 (344)
T ss_pred             ccccccccccCCCcccccccch-hhheeeccc
Confidence             236667777666655555443 244455543

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.27  E-value=7.6e-09  Score=89.76  Aligned_cols=224  Identities=16%  Similarity=0.134  Sum_probs=147.6

Q ss_pred             CCeEEEEeCCCCccccceeecc-ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE
Q psy8152          64 GQKIKIYDTDFKNFNTNTDVSF-GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        64 d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      +|+|..||..+|+.+....+.. ....+....+.+.++++++.++.|+.||..+++.++.... ...+.... ...+..+
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v   79 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRV   79 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eeccccc
Confidence            5889999999999988876522 2223322445777888889999999999999998874433 33322222 2255677


Q ss_pred             EEeeCCCeEEEEEcCCceeeeee-ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC
Q psy8152         143 ATGGKENDLKLWDLNTTKNIFSA-KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ  221 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  221 (444)
                      ++++.++.|+.+|..+|+.+... ......               ......+.....+..++++..++.|..+|++   +
T Consensus        80 ~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~---t  141 (238)
T PF13360_consen   80 YVGTSDGSLYALDAKTGKVLWSIYLTSSPP---------------AGVRSSSSPAVDGDRLYVGTSSGKLVALDPK---T  141 (238)
T ss_dssp             EEEETTSEEEEEETTTSCEEEEEEE-SSCT---------------CSTB--SEEEEETTEEEEEETCSEEEEEETT---T
T ss_pred             ccccceeeeEecccCCcceeeeeccccccc---------------cccccccCceEecCEEEEEeccCcEEEEecC---C
Confidence            77778889999999999998874 322110               0001122222237888888889999999999   7


Q ss_pred             ccceEEEeCCCCCe----------eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         222 RRPVLKVDIPDVAL----------SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       222 ~~~~~~~~~~~~~i----------~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      ++.+..........          ..-....++ .++.++.++.+.-+|+.+ ++.+....  ...+..+ ..+.+..|+
T Consensus       142 G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~t-g~~~w~~~--~~~~~~~-~~~~~~~l~  216 (238)
T PF13360_consen  142 GKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLAT-GEKLWSKP--ISGIYSL-PSVDGGTLY  216 (238)
T ss_dssp             TEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTT-TEEEEEEC--SS-ECEC-EECCCTEEE
T ss_pred             CcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCC-CCEEEEec--CCCccCC-ceeeCCEEE
Confidence            88887776543221          122222244 777777777644449999 88665433  2223321 346777888


Q ss_pred             EEECCCcEEEEEcCCCceEEE
Q psy8152         292 SVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       292 s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      .++.++.|.+||+.+|+.+..
T Consensus       217 ~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  217 VTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             EEETTTEEEEEETTTTEEEEE
T ss_pred             EEeCCCEEEEEECCCCCEEeE
Confidence            888999999999999988653

...

>KOG4190|consensus

Probab=99.27  E-value=1.4e-11  Score=110.49  Aligned_cols=241  Identities=12%  Similarity=0.077  Sum_probs=163.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-----CccccceeeccccccEEEEEe--CCCeEEEEecCCcEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-----KNFNTNTDVSFGEGDIVGVSR--YDECILTAVKSGDVKLW  112 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-----~~~~~~~~~~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw  112 (444)
                      +|...|++++-- .+.+-+++++.|++|++|.+..     +.....+....|..+|..+..  +.+++  ++.||.|++|
T Consensus       733 GH~~~iRai~Ai-dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i--~ScD~giHlW  809 (1034)
T KOG4190|consen  733 GHQEKIRAIAAI-DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSI--ASCDGGIHLW  809 (1034)
T ss_pred             CcHHHhHHHHhc-ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecccee--eeccCcceee
Confidence            999999999877 6889999999999999999853     222345555688888887754  44445  4568999999


Q ss_pred             EcCCCCccccccc--cCCCeEEEEEec--cCCEEEEe-eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         113 RYKTEPDQWTNFN--VGPQLECMKHNK--HSNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       113 ~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      |.--++.+.....  ..+.+..+...+  +..+++.| +...+|+++|.+.+.....++....      .-|       .
T Consensus       810 DPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna------~~P-------n  876 (1034)
T KOG4190|consen  810 DPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNA------PGP-------N  876 (1034)
T ss_pred             cccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccC------CCC-------c
Confidence            9877776642221  223334444444  34444444 7789999999998776655543321      001       1


Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEE-EEcCCCCc
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMA-VDLRGKGK  266 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~  266 (444)
                      ..+++++..|.|+.++++-.+|.|.+.|.+   +++.+..++.-......++ .|..+.|+....|.++.+ |..-. +.
T Consensus       877 a~~R~iaVa~~GN~lAa~LSnGci~~LDaR---~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhald-gi  951 (1034)
T KOG4190|consen  877 ALTRAIAVADKGNKLAAALSNGCIAILDAR---NGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALD-GI  951 (1034)
T ss_pred             hheeEEEeccCcchhhHHhcCCcEEEEecC---CCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcC-Ce
Confidence            358999999999999999999999999999   7777766655444444443 355567777777888888 87666 55


Q ss_pred             ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         267 PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       267 ~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      ...+.+....+..-+  ..-|.-|+++.....+.||.
T Consensus       952 mh~q~kpppepahfl--qsvgpSLV~a~~Gn~lgVYa  986 (1034)
T KOG4190|consen  952 MHLQDKPPPEPAHFL--QSVGPSLVTAQNGNILGVYA  986 (1034)
T ss_pred             eeeccCCCCcchhhh--hccCceeEEeccCcEEEEEe
Confidence            555554333332211  12355677777777777874

>KOG0309|consensus

Probab=99.26  E-value=3.7e-11  Score=111.22  Aligned_cols=294  Identities=10%  Similarity=0.050  Sum_probs=188.7

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc--cccEEEEEeC--CCeEEEEecCCcEEEEEcCCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG--EGDIVGVSRY--DECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~--~~~v~~~s~~--~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .+.+.++..+ |.++-++.++.-| +.+.|+...-....+-.+-.  ...-+.+++.  -.+-++......-.+|++...
T Consensus        24 ~~~~~a~si~-p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s  101 (1081)
T KOG0309|consen   24 DGGFNAVSIN-PSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS  101 (1081)
T ss_pred             cCcccceeec-cccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence            5778888999 7899999998865 44556643222111110111  1112334443  344444555556678997643


Q ss_pred             C--ccc-cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         118 P--DQW-TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       118 ~--~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                      .  .+. .+.+|...|+.+.|+| ....+++++.|-.+..||++.. .++..+..-..                  ....
T Consensus       102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s------------------~asq  163 (1081)
T KOG0309|consen  102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRS------------------AASQ  163 (1081)
T ss_pred             CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccc------------------cCce
Confidence            2  222 4567999999999999 6789999999999999999984 34444433333                  4678


Q ss_pred             EEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         193 ISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       193 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      ++|+-....+++.+....|++||++  ....++..+++|-..|..+.|..- ...+++.+.|++|+.||....-+.-...
T Consensus       164 Vkwnyk~p~vlasshg~~i~vwd~r--~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~  241 (1081)
T KOG0309|consen  164 VKWNYKDPNVLASSHGNDIFVWDLR--KGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRT  241 (1081)
T ss_pred             eeecccCcchhhhccCCceEEEecc--CCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccccee
Confidence            8998665555566777889999999  567788889999888999988763 4568889999999999987611111111


Q ss_pred             ccccCceeEEEecCCCC--EEEEEECCCcEEEEE---------cCC-CceEEEee-cCCceeEEEEcCCCccc-ccchhh
Q psy8152         272 KGFAGCVKDIACPLNEN--LILSVSLDRHFRVHD---------FHS-KKLLRKDY-MQSRLTSILVRSDFSLE-NETKKE  337 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~~--~l~s~~~dg~i~vw~---------~~~-~~~~~~~~-~~~~i~~~~~~~~~~~~-~~~~~~  337 (444)
                      ..-..+|..-++-|-|.  ++.-.-.+..+.+++         ..+ ..+++++. |...|....|+..-... +-....
T Consensus       242 vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rd  321 (1081)
T KOG0309|consen  242 VTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRD  321 (1081)
T ss_pred             ccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccc
Confidence            12345666666666553  222111222444443         333 24555554 77788887776542210 111223


Q ss_pred             hhccccccCCCccccCCCcc
Q psy8152         338 EQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       338 ~~~~s~~~d~~i~~W~~~~~  357 (444)
                      -.|+|-+.|..+|+|-+...
T Consensus       322 fQLVTWSkD~~lrlWpI~~~  341 (1081)
T KOG0309|consen  322 FQLVTWSKDQTLRLWPIDSQ  341 (1081)
T ss_pred             eeEEEeecCCceEeeeccHH
Confidence            57999999999999988753

>KOG3914|consensus

Probab=99.26  E-value=1.3e-10  Score=100.41  Aligned_cols=160  Identities=16%  Similarity=0.141  Sum_probs=115.4

Q ss_pred             eEEEEEeccCCEEEEeeCCCeEEEEEcCCcee----eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         130 LECMKHNKHSNIIATGGKENDLKLWDLNTTKN----IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       130 v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      ...+..++.+++||.+..+....++++.....    +.......                   .-+++.|..+.....++
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~-------------------~~~ai~~~~~~~sv~v~  125 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPK-------------------RPTAISFIREDTSVLVA  125 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeeccc-------------------CcceeeeeeccceEEEE
Confidence            44556677888999988888887887766433    11111111                   24455555555444444


Q ss_pred             eCC---ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEE
Q psy8152         206 SKQ---GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDI  281 (444)
Q Consensus       206 ~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~  281 (444)
                      -.-   ..+.+|...   . .+...+.+|-..++.++|+||+++|+++..|..|+|-.... ...+..|. ||+..|..+
T Consensus       126 dkagD~~~~di~s~~---~-~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa-~f~IesfclGH~eFVS~i  200 (390)
T KOG3914|consen  126 DKAGDVYSFDILSAD---S-GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPA-TFVIESFCLGHKEFVSTI  200 (390)
T ss_pred             eecCCceeeeeeccc---c-cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCc-ccchhhhccccHhheeee
Confidence            444   444455544   2 33344568999999999999999999999999999998887 66666666 799999999


Q ss_pred             EecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         282 ACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +.-++ ..|+++|.|++|++||+.+|+++.++.
T Consensus       201 sl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  201 SLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             eeccC-ceeeecCCCCcEEEEecccCCcccccc
Confidence            99654 569999999999999999999886654

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.24  E-value=1.3e-08  Score=105.15  Aligned_cols=253  Identities=9%  Similarity=0.025  Sum_probs=151.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecc---------cCcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCCC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY---------ITNKASVLALNWGNVEESELLIAY-SGQKIKIYDTDF   74 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~   74 (444)
                      ++..+++-...+.|++|+.....  ...+.....         ..+-.....|++. ++++.|+++. ..+.|+++++.+
T Consensus       579 ~g~lyVaDs~n~rI~v~d~~G~~--i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd-~~gn~LYVaDt~n~~Ir~id~~~  655 (1057)
T PLN02919        579 NNRLFISDSNHNRIVVTDLDGNF--IVQIGSTGEEGLRDGSFEDATFNRPQGLAYN-AKKNLLYVADTENHALREIDFVN  655 (1057)
T ss_pred             CCeEEEEECCCCeEEEEeCCCCE--EEEEccCCCcCCCCCchhccccCCCcEEEEe-CCCCEEEEEeCCCceEEEEecCC
Confidence            34566666778889999875432  111111000         0122346889999 6777666654 457899999876


Q ss_pred             Cccccceeecc-----------------ccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccc-----------
Q psy8152          75 KNFNTNTDVSF-----------------GEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFN-----------  125 (444)
Q Consensus        75 ~~~~~~~~~~~-----------------~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------  125 (444)
                      +... ++...+                 ....-.+++| ++.++++.+.++.|++|+..++.... +.+           
T Consensus       656 ~~V~-tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G~G~~~~~~g~~  733 (1057)
T PLN02919        656 ETVR-TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSGDGYERNLNGSS  733 (1057)
T ss_pred             CEEE-EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-EecCCccccCCCCc
Confidence            5432 221100                 0112356677 45666777788999999987664321 111           


Q ss_pred             ----cCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCCceeeeeeecccc-eeeEeeeC-CCccc-ccCccceeEEEEec
Q psy8152         126 ----VGPQLECMKHNKHSN-IIATGGKENDLKLWDLNTTKNIFSAKNVSH-RVLVYSVK-PDEFD-LRRPVWVNGISFLP  197 (444)
Q Consensus       126 ----~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~~~i~~~~~~~  197 (444)
                          .-.....++++|+++ ++++.+.++.|++||+.++.......+... ......+- .++.. ...-.....+++++
T Consensus       734 ~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~  813 (1057)
T PLN02919        734 GTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAK  813 (1057)
T ss_pred             cccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeC
Confidence                112456799999887 445556679999999987653211110000 00000000 00000 00011246899999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeC--------------CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI--------------PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      +|+++++-+.+++|++||..   ..... ++.+              .-.....|+++++|+++++-+.++.|++||+.+
T Consensus       814 dG~LYVADs~N~rIrviD~~---tg~v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~  889 (1057)
T PLN02919        814 DGQIYVADSYNHKIKKLDPA---TKRVT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK  889 (1057)
T ss_pred             CCcEEEEECCCCEEEEEECC---CCeEE-EEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence            99988999999999999987   33222 2211              112467899999999999999999999999988


Q ss_pred             CCcc
Q psy8152         264 KGKP  267 (444)
Q Consensus       264 ~~~~  267 (444)
                       +..
T Consensus       890 -~~~  892 (1057)
T PLN02919        890 -GEA  892 (1057)
T ss_pred             -Ccc
Confidence             654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.24  E-value=3.7e-10  Score=94.37  Aligned_cols=251  Identities=13%  Similarity=0.232  Sum_probs=164.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cccceeecccc------------ccEEEE---EeCC-C
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FNTNTDVSFGE------------GDIVGV---SRYD-E   98 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~------------~~v~~~---s~~~-~   98 (444)
                      .....|+++.|. ..|.+|++|...|.|.+|.-....     ....|+  +|.            ..|..+   .+.+ .
T Consensus        24 tead~ItaVefd-~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQ--she~EFDYLkSleieEKin~I~w~~~t~r~  100 (460)
T COG5170          24 TEADKITAVEFD-ETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQ--SHELEFDYLKSLEIEEKINAIEWFDDTGRN  100 (460)
T ss_pred             cccceeeEEEec-cccceEeecCCCceEEEeecccccccchhhhhhhc--ccccchhhhhhccHHHHhhheeeecCCCcc
Confidence            346789999999 789999999999999999765432     112222  332            123333   2333 3


Q ss_pred             eEEEEecCCcEEEEEcCCCC-------------------cc-----------------------c-cccccCCCeEEEEE
Q psy8152          99 CILTAVKSGDVKLWRYKTEP-------------------DQ-----------------------W-TNFNVGPQLECMKH  135 (444)
Q Consensus        99 ~l~~~~~dg~i~iw~~~~~~-------------------~~-----------------------~-~~~~~~~~v~~~~~  135 (444)
                      .++..+.|.+|++|.+....                   ++                       + ....|...|.++.|
T Consensus       101 hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~  180 (460)
T COG5170         101 HFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISF  180 (460)
T ss_pred             eEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeee
Confidence            46677899999999875320                   00                       0 01236667888999


Q ss_pred             eccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEE
Q psy8152         136 NKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVY  214 (444)
Q Consensus       136 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~  214 (444)
                      +.+...++++. |-.|.+|++......+         ..+.+.|..+.... .-|++..|+|.. ..+.-.+..|.|++-
T Consensus       181 NsD~et~lSaD-dLrINLWnl~i~D~sF---------nIVDiKP~nmeeLt-eVItSaeFhp~~cn~fmYSsSkG~Ikl~  249 (460)
T COG5170         181 NSDKETLLSAD-DLRINLWNLEIIDGSF---------NIVDIKPHNMEELT-EVITSAEFHPEMCNVFMYSSSKGEIKLN  249 (460)
T ss_pred             cCchheeeecc-ceeeeeccccccCCce---------EEEeccCccHHHHH-HHHhhcccCHhHcceEEEecCCCcEEeh
Confidence            88777777654 6789999987532221         22222332221111 138899999976 677778889999999


Q ss_pred             EcCCCC---CccceEE----------EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc------
Q psy8152         215 DPKITT---QRRPVLK----------VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA------  275 (444)
Q Consensus       215 d~~~~~---~~~~~~~----------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~------  275 (444)
                      |++.+.   ....+..          +..-...|..+.|+++|++|++-+. -+++|||++....++.+++-|.      
T Consensus       250 DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l  328 (460)
T COG5170         250 DLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDEL  328 (460)
T ss_pred             hhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHH
Confidence            998100   0011111          1122356788999999999987654 4799999998677888886543      


Q ss_pred             ------Cce---eEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         276 ------GCV---KDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       276 ------~~i---~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                            ..|   ..+.|+.+.+.+++|+.....-+|-..
T Consensus       329 ~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~  367 (460)
T COG5170         329 NDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTD  367 (460)
T ss_pred             HhhhhccceeeeEEEEecCCcccccccccccceeeeccc
Confidence                  222   346788888999999998888888643

>KOG4190|consensus

Probab=99.24  E-value=1.7e-11  Score=109.89  Aligned_cols=207  Identities=17%  Similarity=0.248  Sum_probs=150.6

Q ss_pred             ccccccEEEEE--eCCCeEEEEecCCcEEEEEcCC-------CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152          84 SFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKT-------EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLW  154 (444)
Q Consensus        84 ~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  154 (444)
                      .+|...|.++.  .+.+.+++++.|.+|++|.++.       ..+..++..|..+|..+.|..+.++++++  ||-|++|
T Consensus       732 ~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlW  809 (1034)
T KOG4190|consen  732 TGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLW  809 (1034)
T ss_pred             cCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceee
Confidence            36677776663  3556799999999999999863       23556788899999999999887777764  6889999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CC-EEEEEeCCceEEEEEcCCCCCccceEEEe--
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SD-KVAVCSKQGYVRVYDPKITTQRRPVLKVD--  229 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--  229 (444)
                      |.-.+.++..+.....                .+.+..+...|+  .. .++-|+...+|+++|.+   ...-+..++  
T Consensus       810 DPFigr~Laq~~dapk----------------~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaR---sce~~~E~kVc  870 (1034)
T KOG4190|consen  810 DPFIGRLLAQMEDAPK----------------EGAGGNIKCLENVDRHILIAGCSAESTVKLFDAR---SCEWTCELKVC  870 (1034)
T ss_pred             cccccchhHhhhcCcc----------------cCCCceeEecccCcchheeeeccchhhheeeecc---cccceeeEEec
Confidence            9887776654322111                012333333333  23 34444788999999999   443333332  


Q ss_pred             ---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE-EEcC
Q psy8152         230 ---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV-HDFH  305 (444)
Q Consensus       230 ---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v-w~~~  305 (444)
                         +.+..+.+++..|.|+.++++-.+|.|.+.|.++ ++.+..++...-....++- |..+.|+....|.++.| |...
T Consensus       871 na~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~-G~vINswrpmecdllqlaa-psdq~L~~saldHslaVnWhal  948 (1034)
T KOG4190|consen  871 NAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARN-GKVINSWRPMECDLLQLAA-PSDQALAQSALDHSLAVNWHAL  948 (1034)
T ss_pred             cCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCC-CceeccCCcccchhhhhcC-chhHHHHhhcccceeEeeehhc
Confidence               4456688999999999999999999999999999 9999988866555555544 66788888889999999 9877


Q ss_pred             CCceEEEe
Q psy8152         306 SKKLLRKD  313 (444)
Q Consensus       306 ~~~~~~~~  313 (444)
                      .+......
T Consensus       949 dgimh~q~  956 (1034)
T KOG4190|consen  949 DGIMHLQD  956 (1034)
T ss_pred             CCeeeecc
Confidence            76654443

>KOG1912|consensus

Probab=99.24  E-value=5.7e-09  Score=97.65  Aligned_cols=337  Identities=16%  Similarity=0.096  Sum_probs=193.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec--cCC-cEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN--VEE-SELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      -.-.|+++...|.|.+||+.....+    ..+.  .|..+|..++|-+  ++. ..|++-....+|.+|+..+|+....+
T Consensus        78 ~~lliAsaD~~GrIil~d~~~~s~~----~~l~--~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~  151 (1062)
T KOG1912|consen   78 SQLLIASADISGRIILVDFVLASVI----NWLS--HSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKY  151 (1062)
T ss_pred             cceeEEeccccCcEEEEEehhhhhh----hhhc--CCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecc
Confidence            3457888999999999999877641    2222  6889999999974  233 56666666789999999999988876


Q ss_pred             eeccccccEEEEE--e-CCCeEEEEecCCcEEEEEcCC-------CCccccccccCC-----------------------
Q psy8152          82 DVSFGEGDIVGVS--R-YDECILTAVKSGDVKLWRYKT-------EPDQWTNFNVGP-----------------------  128 (444)
Q Consensus        82 ~~~~~~~~v~~~s--~-~~~~l~~~~~dg~i~iw~~~~-------~~~~~~~~~~~~-----------------------  128 (444)
                      ..  ......+|.  | +.+.+..-+..|.|.+-+.-.       ++..+....|..                       
T Consensus       152 ~y--s~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~f  229 (1062)
T KOG1912|consen  152 DY--SHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYF  229 (1062)
T ss_pred             cc--CCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhH
Confidence            53  233334453  3 455666666666666665321       111111111211                       


Q ss_pred             --CeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc---------ccc------------
Q psy8152         129 --QLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF---------DLR------------  185 (444)
Q Consensus       129 --~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~------------  185 (444)
                        ....++|+|.-+.++.......+.++|++-..++.......+....+.+-|+..         +..            
T Consensus       230 ity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~  309 (1062)
T KOG1912|consen  230 ITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTE  309 (1062)
T ss_pred             HHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCcc
Confidence              012356788444444444567899999998888877766665333333333210         000            


Q ss_pred             -----------CccceeEEEEe-----------cC-CCEEEEEeCCceEEEEEcCCCCCccc---------eEEE-----
Q psy8152         186 -----------RPVWVNGISFL-----------PN-SDKVAVCSKQGYVRVYDPKITTQRRP---------VLKV-----  228 (444)
Q Consensus       186 -----------~~~~i~~~~~~-----------~~-~~~l~~~~~d~~i~i~d~~~~~~~~~---------~~~~-----  228 (444)
                                 ....+.+++-.           |. ...++.--.+|.+.+|.++. +....         ...|     
T Consensus       310 f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~-~ri~~~~~s~~iel~~pf~f~~~  388 (1062)
T KOG1912|consen  310 FKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSN-GRIHLDYRSSSIELVLPFDFNLS  388 (1062)
T ss_pred             ccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhc-CCcCcccccccccccccccccCc
Confidence                       00011111110           11 01111112234444444440 00000         0000     


Q ss_pred             ---------------eCCCCCeeEEEEcc-----------CC-------CEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         229 ---------------DIPDVALSCITTTN-----------QS-------HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       229 ---------------~~~~~~i~~~~~~~-----------~~-------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                                     ..|....++....|           .+       .++|.|...|+|.++|+.+ +..-..+..|.
T Consensus       389 ~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst-~~v~~~fsvht  467 (1062)
T KOG1912|consen  389 TKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVST-NAVAASFSVHT  467 (1062)
T ss_pred             eeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecc-hhhhhhhcccc
Confidence                           01222233333222           12       2578899999999999999 88889999999


Q ss_pred             CceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEe----ecCCceeEEEEcCCCcccccchhhhhcc
Q psy8152         276 GCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKD----YMQSRLTSILVRSDFSLENETKKEEQEH  341 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~  341 (444)
                      +.|.++.|-.... |++.+.          -+.+.|=++++|....--    ....+|..+..+..         +.+++
T Consensus       468 ~~VkgleW~g~ss-lvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~---------~~yLa  537 (1062)
T KOG1912|consen  468 SLVKGLEWLGNSS-LVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSS---------GRYLA  537 (1062)
T ss_pred             cceeeeeecccee-EEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeeccc---------CceEE
Confidence            9999999975544 443332          234677788887543321    14456777766533         57888


Q ss_pred             ccccCCCccccCCCcccccc
Q psy8152         342 SEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       342 s~~~d~~i~~W~~~~~~~~~  361 (444)
                      ..-.+.-+.+|++.+..+.+
T Consensus       538 i~Fr~~plEiwd~kt~~~lr  557 (1062)
T KOG1912|consen  538 ILFRREPLEIWDLKTLRMLR  557 (1062)
T ss_pred             EEecccchHHHhhccchHHH
Confidence            88889999999997655443

>KOG2314|consensus

Probab=99.24  E-value=6.5e-09  Score=93.66  Aligned_cols=260  Identities=13%  Similarity=0.125  Sum_probs=156.0

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceE-EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--E
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVL-ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--G   92 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~   92 (444)
                      ..|.|||+.+|.. ...+..+.   ....+. -+.|| .+++++|--.. ..|.||+..+-.++..-.+.  -..|.  +
T Consensus       282 ~~l~IWDI~tG~l-krsF~~~~---~~~~~WP~frWS-~DdKy~Arm~~-~sisIyEtpsf~lld~Kslk--i~gIr~Fs  353 (698)
T KOG2314|consen  282 QQLIIWDIATGLL-KRSFPVIK---SPYLKWPIFRWS-HDDKYFARMTG-NSISIYETPSFMLLDKKSLK--ISGIRDFS  353 (698)
T ss_pred             ceEEEEEccccch-hcceeccC---CCccccceEEec-cCCceeEEecc-ceEEEEecCceeeecccccC--CccccCcc
Confidence            5789999999985 33343332   122333 35799 78999987666 68999987654433322211  22333  4


Q ss_pred             EEeCCCeEEEEecC-----CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC----------CCeEEEEEcC
Q psy8152          93 VSRYDECILTAVKS-----GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK----------ENDLKLWDLN  157 (444)
Q Consensus        93 ~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~vwd~~  157 (444)
                      ++|.+++||--...     ..+.+..+.+++.++...-|.-.=..+.|..+|.+|+.--.          -..+-|+.++
T Consensus       354 wsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrir  433 (698)
T KOG2314|consen  354 WSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIR  433 (698)
T ss_pred             cCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEee
Confidence            46777777654332     34666777776666433223322234556667777764221          1123344444


Q ss_pred             Cce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC---CceEEEEEcC-CCCCccceEEEeCCC
Q psy8152         158 TTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK---QGYVRVYDPK-ITTQRRPVLKVDIPD  232 (444)
Q Consensus       158 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~-~~~~~~~~~~~~~~~  232 (444)
                      ... ++.....                   ...|...+|-|.|+.+++-+.   ..++.+|-+. .......+..+.  .
T Consensus       434 eKdIpve~vel-------------------ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k  492 (698)
T KOG2314|consen  434 EKDIPVEVVEL-------------------KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--K  492 (698)
T ss_pred             ccCCCceeeec-------------------chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--c
Confidence            322 1222111                   125889999999977765543   3578888887 122333444443  3


Q ss_pred             CCeeEEEEccCCCEEEE---EcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEEC------CCcEEEE
Q psy8152         233 VALSCITTTNQSHYVIV---GSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSL------DRHFRVH  302 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~---~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~------dg~i~vw  302 (444)
                      ...+.+.|+|.|+++++   ++..|.+.++|+.. ..+..+-. .| ...+.+.|.|.|+|+++++.      |..-+||
T Consensus       493 ~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~-a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~  570 (698)
T KOG2314|consen  493 KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY-ADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIF  570 (698)
T ss_pred             cccceEEEcCCCcEEEEEEecccccceEEEecch-hhhhhccCccc-cccccceECCCCCEEEEeeehhhhccccceEEE
Confidence            45688999999999887   45678999999874 23222222 23 34578899999999999885      3446677


Q ss_pred             EcCC
Q psy8152         303 DFHS  306 (444)
Q Consensus       303 ~~~~  306 (444)
                      ++..
T Consensus       571 tfqG  574 (698)
T KOG2314|consen  571 TFQG  574 (698)
T ss_pred             Eeec
Confidence            7764

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.23  E-value=5.2e-09  Score=93.37  Aligned_cols=239  Identities=13%  Similarity=0.110  Sum_probs=159.0

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC-------------
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG-------------  107 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg-------------  107 (444)
                      -.-++..++|| |.|.+|++... ..|.+|.-.....+..+.  .....-..|+|.+++|.+-+..+             
T Consensus        31 ~~~p~~~~~~S-P~G~~l~~~~~-~~V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~  106 (561)
T COG5354          31 ENWPVAYVSES-PLGTYLFSEHA-AGVECWGGPSKAKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTS  106 (561)
T ss_pred             cCcchhheeec-Ccchheehhhc-cceEEccccchhheeeee--cCCceecccCcccceeeeeccCCccChhhccCCccc
Confidence            45688999999 79999998877 578999877666555543  22555677899999999876543             


Q ss_pred             --cEEEEEcCCCCccccccccCCC--eE-EEEEeccCCEEEEeeCCCeEEEEEcCCceee-eeeecccceeeEeeeCCCc
Q psy8152         108 --DVKLWRYKTEPDQWTNFNVGPQ--LE-CMKHNKHSNIIATGGKENDLKLWDLNTTKNI-FSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       108 --~i~iw~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~  181 (444)
                        .+.+||+.++..+..+.....+  .+ -+.|+-+.+++|-.. ...++|+++ +.... ..++...            
T Consensus       107 ~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv-~~sl~i~e~-t~n~~~~p~~~lr------------  172 (561)
T COG5354         107 KNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVV-GSSLYIHEI-TDNIEEHPFKNLR------------  172 (561)
T ss_pred             cCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhc-cCeEEEEec-CCccccCchhhcc------------
Confidence              4999999999988755554444  44 678888777776553 357999997 32211 1111111            


Q ss_pred             ccccCccceeEEEEecCC--CEEE-----EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc---
Q psy8152         182 FDLRRPVWVNGISFLPNS--DKVA-----VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS---  251 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~--~~l~-----~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---  251 (444)
                           ...|....|+|.+  ..|+     ..+..+++++|.+.   ....+.+-......-..+.|.+.|++|++--   
T Consensus       173 -----~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp---~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~  244 (561)
T COG5354         173 -----PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIP---KNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTH  244 (561)
T ss_pred             -----ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEcc---CCCeeeeeeeEeecccEEEEecCCceEEEEEEEe
Confidence                 1136777777764  3333     24668899999998   4444443222222335688999998876521   


Q ss_pred             --------CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE--ECCCcEEEEEcCCC
Q psy8152         252 --------TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV--SLDRHFRVHDFHSK  307 (444)
Q Consensus       252 --------~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~--~~dg~i~vw~~~~~  307 (444)
                              ....++|+++.. .. +.......++|..++|.|.++.+++.  -..-.+.+++++..
T Consensus       245 ~ksnKsyfgesnLyl~~~~e-~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N  308 (561)
T COG5354         245 TKSNKSYFGESNLYLLRITE-RS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN  308 (561)
T ss_pred             eecccceeccceEEEEeecc-cc-cceeccccccceeeeecccCCceeEEecccccceeecccccc
Confidence                    124588888875 33 33332568899999999998766554  46778889998765

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.23  E-value=1.5e-08  Score=94.64  Aligned_cols=310  Identities=10%  Similarity=0.088  Sum_probs=183.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecc---c-Cc--ccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY---I-TN--KASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNF   77 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~---~-~h--~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~   77 (444)
                      .+..+++++.+|.|.-+|..+++..-+  ..+..   + ..  ...+ ..+..   .+..++.++.++.++.+|..+|+.
T Consensus        68 ~~~~vy~~~~~g~l~ald~~tG~~~W~--~~~~~~~~~~~~~~~~~~~~~~~v---~~~~v~v~~~~g~l~ald~~tG~~  142 (394)
T PRK11138         68 AYNKVYAADRAGLVKALDADTGKEIWS--VDLSEKDGWFSKNKSALLSGGVTV---AGGKVYIGSEKGQVYALNAEDGEV  142 (394)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEeeE--EcCCCcccccccccccccccccEE---ECCEEEEEcCCCEEEEEECCCCCC
Confidence            356788889999999999988874211  11110   0 00  0011 11222   256778888899999999999999


Q ss_pred             ccceeeccccccEEE-EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE-EEEEec--cCCEEEEeeCCCeEEE
Q psy8152          78 NTNTDVSFGEGDIVG-VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE-CMKHNK--HSNIIATGGKENDLKL  153 (444)
Q Consensus        78 ~~~~~~~~~~~~v~~-~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~--~~~~l~~~~~d~~i~v  153 (444)
                      +......+   .+.+ ....+..++.++.++.|..+|..+++.++........+. ...-+|  .+..++.++.+|.+..
T Consensus       143 ~W~~~~~~---~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a  219 (394)
T PRK11138        143 AWQTKVAG---EALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSA  219 (394)
T ss_pred             cccccCCC---ceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEE
Confidence            88776432   1111 111355677788899999999999998874432211100 000122  2345777788899999


Q ss_pred             EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC
Q psy8152         154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP  231 (444)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  231 (444)
                      +|..+++.+........         .+...  ......+..+|  .+..+++++.+|.+..+|..   +++.+.+....
T Consensus       220 ~d~~~G~~~W~~~~~~~---------~~~~~--~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~---tG~~~W~~~~~  285 (394)
T PRK11138        220 VLMEQGQLIWQQRISQP---------TGATE--IDRLVDVDTTPVVVGGVVYALAYNGNLVALDLR---SGQIVWKREYG  285 (394)
T ss_pred             EEccCChhhheeccccC---------CCccc--hhcccccCCCcEEECCEEEEEEcCCeEEEEECC---CCCEEEeecCC
Confidence            99999887765432111         00000  00000011111  24567777789999999998   56655544321


Q ss_pred             CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                      .  ...+..  .+..|+.++.+|.++.+|..+ ++.+....... ....+...  .+.+|+.++.+|.|++.|..+|+.+
T Consensus       286 ~--~~~~~~--~~~~vy~~~~~g~l~ald~~t-G~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~  358 (394)
T PRK11138        286 S--VNDFAV--DGGRIYLVDQNDRVYALDTRG-GVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFV  358 (394)
T ss_pred             C--ccCcEE--ECCEEEEEcCCCeEEEEECCC-CcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence            1  112222  456788888999999999998 88776543211 11122222  2567888999999999999999998


Q ss_pred             EEeecC-CceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         311 RKDYMQ-SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       311 ~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .+.... ..+.+   +|..      . +..+..++.+|.+..++
T Consensus       359 ~~~~~~~~~~~s---~P~~------~-~~~l~v~t~~G~l~~~~  392 (394)
T PRK11138        359 AQQKVDSSGFLS---EPVV------A-DDKLLIQARDGTVYAIT  392 (394)
T ss_pred             EEEEcCCCccee---CCEE------E-CCEEEEEeCCceEEEEe
Confidence            876532 22221   1110      1 13455567777776553

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.23  E-value=1.9e-08  Score=89.14  Aligned_cols=213  Identities=12%  Similarity=0.115  Sum_probs=153.0

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCccccceeec-----ccccc-E-------EEEEe-CCCeEEEEecCCcEEEEEcCCCC
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNFNTNTDVS-----FGEGD-I-------VGVSR-YDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-----~~~~~-v-------~~~s~-~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .+++.++.... |.|++||..+..+.+. ...     ....+ +       ..+++ +|.+++..+. |+..|.+...+-
T Consensus       276 sDGkrIvFq~~-GdIylydP~td~lekl-dI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~  352 (668)
T COG4946         276 SDGKRIVFQNA-GDIYLYDPETDSLEKL-DIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGY  352 (668)
T ss_pred             CCCcEEEEecC-CcEEEeCCCcCcceee-ecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCe
Confidence            46666665444 8899999876554322 110     00111 1       12343 6788887765 577887776665


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCC-eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKEN-DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .+  ..+|...|.-..+.-+++-++.|..|| .|-|+|..+++.....+....                   |.++..+|
T Consensus       353 ~i--qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~-------------------I~av~vs~  411 (668)
T COG4946         353 SI--QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGN-------------------IEAVKVSP  411 (668)
T ss_pred             eE--EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccc-------------------eEEEEEcC
Confidence            55  567777899888888888999999999 899999998876655555555                   99999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC----cEEEEEcCCCCcceeEecc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG----DMMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~  273 (444)
                      +|++++++.....|.++|+.   ++.+...-+....-|+.+.|+|++++||-+--+|    .|+++|+.. ++.... ..
T Consensus       412 dGK~~vvaNdr~el~vidid---ngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~-~Kiy~v-TT  486 (668)
T COG4946         412 DGKKVVVANDRFELWVIDID---NGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG-GKIYDV-TT  486 (668)
T ss_pred             CCcEEEEEcCceEEEEEEec---CCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC-CeEEEe-cC
Confidence            99999999999999999999   5544443445667899999999999999876665    699999987 554433 32


Q ss_pred             ccCceeEEEecCCCCEEEEEE
Q psy8152         274 FAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       274 h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      ..+.=.+-+|.|++++|.--+
T Consensus       487 ~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         487 PTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             CcccccCcccCCCCcEEEEEe
Confidence            233334558999999776554

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.20  E-value=8.8e-08  Score=83.35  Aligned_cols=221  Identities=13%  Similarity=0.080  Sum_probs=140.5

Q ss_pred             EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc-
Q psy8152          47 ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN-  125 (444)
Q Consensus        47 ~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-  125 (444)
                      +++|.+.++.++++-...+.|+.|+..+++... +....  ..-..+...+..|+.+... .+.++|+.+++....... 
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~~~-~~~~~d~~~g~~~~~~~~~   79 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVADSG-GIAVVDPDTGKVTVLADLP   79 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEETT-CEEEEETTTTEEEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEEcC-ceEEEecCCCcEEEEeecc
Confidence            567883266666676678999999998765543 32222  2223334233555555554 556669888765432221 


Q ss_pred             ----cCCCeEEEEEeccCCEEEEeeCC--------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         126 ----VGPQLECMKHNKHSNIIATGGKE--------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       126 ----~~~~v~~~~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                          .....+.+++.|+|++.++....        |.|..++.. ++.........                   ..+.|
T Consensus        80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~-------------------~pNGi  139 (246)
T PF08450_consen   80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLG-------------------FPNGI  139 (246)
T ss_dssp             TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEES-------------------SEEEE
T ss_pred             CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcc-------------------cccce
Confidence                34557899999999977776543        557777776 44433333322                   37899


Q ss_pred             EEecCCCEEE-EEeCCceEEEEEcCCCCC-c---cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce
Q psy8152         194 SFLPNSDKVA-VCSKQGYVRVYDPKITTQ-R---RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       194 ~~~~~~~~l~-~~~~d~~i~i~d~~~~~~-~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                      +|+|+++.|+ +-+..+.|..|++..... .   +.+..+.......-.+++..+|++.++....+.|.+++..  ++.+
T Consensus       140 ~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~--G~~~  217 (246)
T PF08450_consen  140 AFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD--GKLL  217 (246)
T ss_dssp             EEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT--SCEE
T ss_pred             EECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC--ccEE
Confidence            9999998665 667788999999861111 1   1222223333347889999999988888888999999976  7888


Q ss_pred             eEeccccCceeEEEec-CCCCEEEEE
Q psy8152         269 YKYKGFAGCVKDIACP-LNENLILSV  293 (444)
Q Consensus       269 ~~~~~h~~~i~~~~~s-~~~~~l~s~  293 (444)
                      ..+......+++++|. ++.+.|+..
T Consensus       218 ~~i~~p~~~~t~~~fgg~~~~~L~vT  243 (246)
T PF08450_consen  218 REIELPVPRPTNCAFGGPDGKTLYVT  243 (246)
T ss_dssp             EEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred             EEEcCCCCCEEEEEEECCCCCEEEEE
Confidence            8887555689999994 665555443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.19  E-value=2e-08  Score=93.82  Aligned_cols=259  Identities=12%  Similarity=0.117  Sum_probs=162.7

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEE-EeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLA-LNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +..+++++.+|.|+.+|..+++..    -....   ...+.+ ....   +..++.++.++.|..+|..+|+.+..+...
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~----W~~~~---~~~~~ssP~v~---~~~v~v~~~~g~l~ald~~tG~~~W~~~~~  189 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVA----WQTKV---AGEALSRPVVS---DGLVLVHTSNGMLQALNESDGAVKWTVNLD  189 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCc----ccccC---CCceecCCEEE---CCEEEEECCCCEEEEEEccCCCEeeeecCC
Confidence            467888999999999999988852    11111   122222 1222   456777888899999999999988776532


Q ss_pred             cccccEEE-EEe--CCCeEEEEecCCcEEEEEcCCCCcccccccc-CC------CeEEEEEec--cCCEEEEeeCCCeEE
Q psy8152          85 FGEGDIVG-VSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNV-GP------QLECMKHNK--HSNIIATGGKENDLK  152 (444)
Q Consensus        85 ~~~~~v~~-~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~------~v~~~~~~~--~~~~l~~~~~d~~i~  152 (444)
                      ........ .+|  .+..++.++.+|.+..++..+++.++..... ..      ....+..+|  .+..++.++.+|.+.
T Consensus       190 ~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~  269 (394)
T PRK11138        190 VPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLV  269 (394)
T ss_pred             CCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEE
Confidence            11000000 011  2345777888999999999999877633211 00      011122233  356777788899999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-  231 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-  231 (444)
                      .+|+.+++.+.+.... .                   ...+..  .+..|+.++.+|.+..+|..   .+..+...... 
T Consensus       270 ald~~tG~~~W~~~~~-~-------------------~~~~~~--~~~~vy~~~~~g~l~ald~~---tG~~~W~~~~~~  324 (394)
T PRK11138        270 ALDLRSGQIVWKREYG-S-------------------VNDFAV--DGGRIYLVDQNDRVYALDTR---GGVELWSQSDLL  324 (394)
T ss_pred             EEECCCCCEEEeecCC-C-------------------ccCcEE--ECCEEEEEcCCCeEEEEECC---CCcEEEcccccC
Confidence            9999999887664321 1                   111222  35677778889999999998   55555433211 


Q ss_pred             CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEEEEECCCcEEEEEc
Q psy8152         232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .....+...  .+.+|+.++.+|.|+++|..+ ++.+.+..-....+.+ ..+  .+..|+.++.+|.|+.++.
T Consensus       325 ~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~t-G~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        325 HRLLTAPVL--YNGYLVVGDSEGYLHWINRED-GRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             CCcccCCEE--ECCEEEEEeCCCEEEEEECCC-CCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence            111222222  245788899999999999999 9988877643332322 122  2457888899999988765

>KOG4714|consensus

Probab=99.17  E-value=1.1e-09  Score=89.36  Aligned_cols=189  Identities=13%  Similarity=0.253  Sum_probs=118.1

Q ss_pred             CCCCcccEEEecCCCcEEEEEcCCCccc--------eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC
Q psy8152           2 TLADDYNIYIGSSTGAFKGVNLSKDKCI--------IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD   73 (444)
Q Consensus         2 s~~~~~~l~~g~~dg~i~i~~~~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~   73 (444)
                      +...+.+|+++..++.+..+....+.+.        ...+..+.  .|..+-.+-+.+ ..++.++++..||.+.+++..
T Consensus        43 ~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a--~~sep~p~~~~s-~~~t~V~~~~~dg~~~v~s~~  119 (319)
T KOG4714|consen   43 SLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLA--KNSEIDPNDACT-MTDNRVCIGYADGSLAVFSTD  119 (319)
T ss_pred             echhhheeecccchhheeeeccceEEEechhhcccCcCceeeee--ccCCCCCccccc-ccCCceEecCCCceEEEEech
Confidence            3445678888888887777665443321        11122222  223222222223 346789999999999999876


Q ss_pred             CCccccceeeccccccE-------EEEEeCCCeEEEEe-----cCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCC
Q psy8152          74 FKNFNTNTDVSFGEGDI-------VGVSRYDECILTAV-----KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSN  140 (444)
Q Consensus        74 ~~~~~~~~~~~~~~~~v-------~~~s~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~  140 (444)
                      .-  ...    .|..++       .++...++++.++.     .-+..++|+++..+.......-...|.+++-+| +.+
T Consensus       120 ~~--~~~----~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~  193 (319)
T KOG4714|consen  120 KD--LAL----MSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQH  193 (319)
T ss_pred             HH--Hhh----hhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCccccc
Confidence            51  111    112222       12223344444432     123456666654443322222234599999999 778


Q ss_pred             EEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcC
Q psy8152         141 IIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       141 ~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~  217 (444)
                      ++++|+.+|.+.+||.++.. +...++.|+.                  .|..+-|+|.. ..|++++.||.+..||..
T Consensus       194 ~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~------------------~i~eV~FHpk~p~~Lft~sedGslw~wdas  254 (319)
T KOG4714|consen  194 LVCCGTDDGIVGLWDARNVAMPVSLLKAHKA------------------EIWEVHFHPKNPEHLFTCSEDGSLWHWDAS  254 (319)
T ss_pred             EEEEecCCCeEEEEEcccccchHHHHHHhhh------------------hhhheeccCCCchheeEecCCCcEEEEcCC
Confidence            88999999999999999853 3445556666                  79999999976 889999999999999988

>KOG0882|consensus

Probab=99.16  E-value=1.3e-09  Score=95.70  Aligned_cols=247  Identities=13%  Similarity=0.096  Sum_probs=169.0

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .+++.+++.||.++.|.-..-..    ..-+..+ .|...|.+++.+ -++.++.+.+. |..++++|+.+-..+..+++
T Consensus        20 a~fiiqASlDGh~KFWkKs~isG----vEfVKhFraHL~~I~sl~~S-~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL   94 (558)
T KOG0882|consen   20 AKFIIQASLDGHKKFWKKSRISG----VEFVKHFRAHLGVILSLAVS-YDGWLFRSVEDPDHSVKVFDVENFDMINMIKL   94 (558)
T ss_pred             hheEEeeecchhhhhcCCCCccc----eeehhhhHHHHHHHHhhhcc-ccceeEeeccCcccceeEEEeeccchhhhccc
Confidence            46889999999999998654221    1222222 788999999999 78888888777 99999999987777655554


Q ss_pred             ccccccEEEEEeCC----CeEEEEecCCcEEEEEcCCCCcc--ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGVSRYD----ECILTAVKSGDVKLWRYKTEPDQ--WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~s~~~----~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      ..-...+..+...|    ...++.-.++.+.++|-....+.  ..-.-|..+|.++.+++-+..+++....|.|..|...
T Consensus        95 ~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e  174 (558)
T KOG0882|consen   95 VDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAE  174 (558)
T ss_pred             ccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCC
Confidence            44455555554334    22333445789999996654432  2233499999999999999999999999999999987


Q ss_pred             C------ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--
Q psy8152         158 T------TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--  229 (444)
Q Consensus       158 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--  229 (444)
                      .      .+....++....   .+.      .........++.|+|++..+.+-+.|..|+++..+   .++.++.+.  
T Consensus       175 ~~~qfPr~~l~~~~K~eTd---Ly~------f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~K---tGklvqeiDE~  242 (558)
T KOG0882|consen  175 GPFQFPRTNLNFELKHETD---LYG------FPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFK---TGKLVQEIDEV  242 (558)
T ss_pred             CcccCccccccccccccch---hhc------ccccccCccceEEccccCcccccCcccEEEEEEec---cchhhhhhhcc
Confidence            3      111122211110   000      00112247899999999999999999999999998   333322211  


Q ss_pred             ------------------------------CC-CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         230 ------------------------------IP-DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       230 ------------------------------~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                                                    .| ...-+.+.|...+++|+.|+.=| |++.++.+ +.+++.+
T Consensus       243 ~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~t-n~v~ri~  313 (558)
T KOG0882|consen  243 LTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDT-NTVVRIL  313 (558)
T ss_pred             chhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeec-CeEEEEe
Confidence                                          11 12335667888899999988776 89999988 6666554

>KOG2695|consensus

Probab=99.14  E-value=3e-10  Score=96.25  Aligned_cols=163  Identities=19%  Similarity=0.194  Sum_probs=121.6

Q ss_pred             EEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC--CC
Q psy8152         143 ATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI--TT  220 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~  220 (444)
                      ++.+.+..|-+-++.++... .+....                   -|.++.|...++++..|..+|.|..+|++.  .+
T Consensus       228 fs~G~sqqv~L~nvetg~~q-sf~sks-------------------DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG  287 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQ-SFQSKS-------------------DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQG  287 (425)
T ss_pred             ecccccceeEEEEeeccccc-ccccch-------------------hHHHHHhcccCCeeEecccCCcEEEEEeeecccC
Confidence            44455667778888775432 222222                   488999998889999999999999999993  22


Q ss_pred             CccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcc---eeEeccccCceeEEEe--cCCCCEEEEEE
Q psy8152         221 QRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKP---CYKYKGFAGCVKDIAC--PLNENLILSVS  294 (444)
Q Consensus       221 ~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~h~~~i~~~~~--s~~~~~l~s~~  294 (444)
                      +..+...+. |...|+++..-. .+++|++.+.+|+|++||++. -++   +.++.||...-..+-+  .+....+++++
T Consensus       288 ~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~-~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~G  365 (425)
T KOG2695|consen  288 NGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA-TKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVG  365 (425)
T ss_pred             CCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehh-hhcccceeeeecccccccccccccccccceEEEcc
Confidence            344555443 788899887766 688999999999999999998 676   8888888765444433  45567899999


Q ss_pred             CCCcEEEEEcCCCceEEEeecCCc-----eeEEEEcCC
Q psy8152         295 LDRHFRVHDFHSKKLLRKDYMQSR-----LTSILVRSD  327 (444)
Q Consensus       295 ~dg~i~vw~~~~~~~~~~~~~~~~-----i~~~~~~~~  327 (444)
                      .|...|||.+..+.++.++..+..     +++++|...
T Consensus       366 dDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~sr  403 (425)
T KOG2695|consen  366 DDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFDSR  403 (425)
T ss_pred             CeeEEEEEecccCceeeccCCCCccccccccceehhcc
Confidence            999999999999999998875443     445555443

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.13  E-value=8.9e-08  Score=89.20  Aligned_cols=213  Identities=10%  Similarity=0.045  Sum_probs=125.4

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCe-EEEEec---CCcEEEEEcCCCCccccccccCCCeEEEEEeccCC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC-ILTAVK---SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  140 (444)
                      ..|.+-|.... ..+.+.. +....-..++|+|+. ++..+.   ...|.++|+.+++... +....+......|+|+|+
T Consensus       169 ~~l~~~d~dg~-~~~~~~~-~~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~-lt~~~g~~~~~~~SPDG~  245 (419)
T PRK04043        169 SNIVLADYTLT-YQKVIVK-GGLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK-IASSQGMLVVSDVSKDGS  245 (419)
T ss_pred             ceEEEECCCCC-ceeEEcc-CCCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE-EecCCCcEEeeEECCCCC
Confidence            35555555433 3333321 222233567899984 554443   3569999998887664 444556677788999998


Q ss_pred             EEEEee-C--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc--eEEEE
Q psy8152         141 IIATGG-K--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG--YVRVY  214 (444)
Q Consensus       141 ~l~~~~-~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~i~  214 (444)
                      .|+... .  +..|.++++.+++.. .+.....                  ......|+|+|+.|+..+. .+  .|.++
T Consensus       246 ~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~------------------~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~  306 (419)
T PRK04043        246 KLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPG------------------IDVNGNFVEDDKRIVFVSDRLGYPNIFMK  306 (419)
T ss_pred             EEEEEEccCCCcEEEEEECCCCcEE-EcccCCC------------------ccCccEECCCCCEEEEEECCCCCceEEEE
Confidence            776543 2  346888888776533 2222221                  1334579999977765543 33  57777


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC---------CcEEEEEcCCCCcceeEeccccCceeEEEecC
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT---------GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL  285 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~  285 (444)
                      ++.   .+.... +.....  ....|+|+|++|+.....         ..|++.|+.. +.. ..+... .......|+|
T Consensus       307 dl~---~g~~~r-lt~~g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~-g~~-~~LT~~-~~~~~p~~SP  377 (419)
T PRK04043        307 KLN---SGSVEQ-VVFHGK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNS-DYI-RRLTAN-GVNQFPRFSS  377 (419)
T ss_pred             ECC---CCCeEe-CccCCC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCC-CCe-EECCCC-CCcCCeEECC
Confidence            776   222211 111111  124899999988875543         3688888876 543 444432 2333578999


Q ss_pred             CCCEEEEEECC-C--cEEEEEcCCCc
Q psy8152         286 NENLILSVSLD-R--HFRVHDFHSKK  308 (444)
Q Consensus       286 ~~~~l~s~~~d-g--~i~vw~~~~~~  308 (444)
                      +|+.|+..+.. +  .|.+.++....
T Consensus       378 DG~~I~f~~~~~~~~~L~~~~l~g~~  403 (419)
T PRK04043        378 DGGSIMFIKYLGNQSALGIIRLNYNK  403 (419)
T ss_pred             CCCEEEEEEccCCcEEEEEEecCCCe
Confidence            99977765543 2  35666665433

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.12  E-value=1.8e-07  Score=78.16  Aligned_cols=235  Identities=11%  Similarity=0.025  Sum_probs=127.6

Q ss_pred             EeeeccCCcEEEEEEcCCeEEEEeCCCC--ccccceeeccc---cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152          48 LNWGNVEESELLIAYSGQKIKIYDTDFK--NFNTNTDVSFG---EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT  122 (444)
Q Consensus        48 ~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~---~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~  122 (444)
                      ++.+ .+|+.||+- .|..|.|-.....  .++...+.+..   .-+-.++||++.+||.+...|+|+++|+........
T Consensus         3 ~~~~-~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I   80 (282)
T PF15492_consen    3 LALS-SDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVI   80 (282)
T ss_pred             eeec-CCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEc
Confidence            4455 456665554 3456666544321  11111121111   223467799999999999999999999875443321


Q ss_pred             c------cccCCCeEEEEEecc------CCEEEEeeCCCeEEEEEcCCc-----eeeeeeecccceeeEeeeCCCccccc
Q psy8152         123 N------FNVGPQLECMKHNKH------SNIIATGGKENDLKLWDLNTT-----KNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       123 ~------~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      .      ......|..+.|.+.      ...|++-...|.++-|-+..+     +..+.+....               .
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~---------------~  145 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSS---------------H  145 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecc---------------c
Confidence            1      112456777777652      235666667777776665321     1222221111               1


Q ss_pred             CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc---cCCCEEEEEcCCCc------E
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT---NQSHYVIVGSTTGD------M  256 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~l~~~~~dg~------i  256 (444)
                      .+..|.++.++|..++|++|+....      .   ...    -......+++-..-   |-.+. ++...++.      .
T Consensus       146 yp~Gi~~~vy~p~h~LLlVgG~~~~------~---~~~----s~a~~~GLtaWRiL~~~Pyyk~-v~~~~~~~~~~~~~~  211 (282)
T PF15492_consen  146 YPHGINSAVYHPKHRLLLVGGCEQN------Q---DGM----SKASSCGLTAWRILSDSPYYKQ-VTSSEDDITASSKRR  211 (282)
T ss_pred             CCCceeEEEEcCCCCEEEEeccCCC------C---Ccc----ccccccCceEEEEcCCCCcEEE-ccccCcccccccccc
Confidence            2336999999999888887765321      0   000    00111112211111   11111 11111111      1


Q ss_pred             EEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         257 MAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       257 ~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .+|.+-+ .+...........|..|..||+|..||+...+|.|.+|++.+-+++....
T Consensus       212 ~~~~~~~-~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~  268 (282)
T PF15492_consen  212 GLLRIPS-FKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK  268 (282)
T ss_pred             ceeeccc-eeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence            2333322 22221112245679999999999999999999999999999877766654

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.11  E-value=3.8e-07  Score=92.73  Aligned_cols=282  Identities=10%  Similarity=0.044  Sum_probs=178.7

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEE----eCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcC-
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIY----DTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK-  115 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw----~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~-  115 (444)
                      ....|.++.|. ++...++.+..+|.|.++    +.........-.+ .......++|||+.+|+.++.+++|.+..-. 
T Consensus        74 ~~~~ivs~~yl-~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~v-d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f  151 (928)
T PF04762_consen   74 PNDKIVSFQYL-ADSESLCIALASGDIILVREDPDPDEDEIEIVGSV-DSGILAASWSPDEELLALVTGEGNLLLMTRDF  151 (928)
T ss_pred             CCCcEEEEEec-cCCCcEEEEECCceEEEEEccCCCCCceeEEEEEE-cCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence            35789999999 789999999999999999    5443333222111 2234445668999999999999988776421 


Q ss_pred             ------------CC--Ccc--------ccccc------------------------cCCCeEEEEEeccCCEEEEeeC--
Q psy8152         116 ------------TE--PDQ--------WTNFN------------------------VGPQLECMKHNKHSNIIATGGK--  147 (444)
Q Consensus       116 ------------~~--~~~--------~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~--  147 (444)
                                  -+  +.+        ..+.+                        +...-..++|-.||.++|+.+.  
T Consensus       152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~  231 (928)
T PF04762_consen  152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEP  231 (928)
T ss_pred             eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEc
Confidence                        00  000        00000                        2224467889899999998774  


Q ss_pred             -C---CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC---CceEEEEEcCCCC
Q psy8152         148 -E---NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK---QGYVRVYDPKITT  220 (444)
Q Consensus       148 -d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~  220 (444)
                       .   ..|+||+-. |....+.....+                  --.+++|.|.|++||+.-.   ...|.+|.-+  +
T Consensus       232 ~~~~~R~iRVy~Re-G~L~stSE~v~g------------------Le~~l~WrPsG~lIA~~q~~~~~~~VvFfErN--G  290 (928)
T PF04762_consen  232 ETGSRRVIRVYSRE-GELQSTSEPVDG------------------LEGALSWRPSGNLIASSQRLPDRHDVVFFERN--G  290 (928)
T ss_pred             CCCceeEEEEECCC-ceEEeccccCCC------------------ccCCccCCCCCCEEEEEEEcCCCcEEEEEecC--C
Confidence             2   578999865 554433332222                  2457899999999998754   4567788766  2


Q ss_pred             CccceEEEe--CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc--ceeEecc-ccCceeEEEecCCC-CEEEEEE
Q psy8152         221 QRRPVLKVD--IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK--PCYKYKG-FAGCVKDIACPLNE-NLILSVS  294 (444)
Q Consensus       221 ~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~-h~~~i~~~~~s~~~-~~l~s~~  294 (444)
                      ...--+.++  .....|..+.|++++..||....+. |.+|-..+ ..  +.+.+.- ....+..+.|+|.. ..|...+
T Consensus       291 LrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N-YHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t  368 (928)
T PF04762_consen  291 LRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN-YHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLT  368 (928)
T ss_pred             cEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC-CEEEEEEEEEccCCCCCCceEECCCCCCEEEEEe
Confidence            333333333  3456789999999999999977555 99999877 43  2223331 23345558999865 4566666


Q ss_pred             CCCcEEEEEc----CCC----------------c----------------eEEEeecCCceeEEEEcCCCcccccchhhh
Q psy8152         295 LDRHFRVHDF----HSK----------------K----------------LLRKDYMQSRLTSILVRSDFSLENETKKEE  338 (444)
Q Consensus       295 ~dg~i~vw~~----~~~----------------~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  338 (444)
                      ..|.+..+++    ..+                .                ....+....+|..++|++..+         
T Consensus       369 ~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~---------  439 (928)
T PF04762_consen  369 SNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNS---------  439 (928)
T ss_pred             cCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCC---------
Confidence            6566654433    111                1                112223456778888876632         


Q ss_pred             hccccccCCCccccCCCc
Q psy8152         339 QEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       339 ~~~s~~~d~~i~~W~~~~  356 (444)
                      .++.-..||.+.+|....
T Consensus       440 ~~avl~~d~~l~~~~~~~  457 (928)
T PF04762_consen  440 RFAVLTSDGSLSIYEWDL  457 (928)
T ss_pred             eEEEEECCCCEEEEEecC
Confidence            266667888888887543

>KOG0882|consensus

Probab=99.11  E-value=3.5e-09  Score=92.95  Aligned_cols=254  Identities=10%  Similarity=0.014  Sum_probs=173.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC---CccccceeeccccccEEE--EEeCCCeEEEEec-CCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF---KNFNTNTDVSFGEGDIVG--VSRYDECILTAVK-SGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~---~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~-dg~i~iw~  113 (444)
                      -|...|+.+.-.  -.+++++++.||.++.|.-..   -+.+..+.  .|...+.+  ++.++.++.+.+. |..++++|
T Consensus         7 mhrd~i~hv~~t--ka~fiiqASlDGh~KFWkKs~isGvEfVKhFr--aHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfD   82 (558)
T KOG0882|consen    7 MHRDVITHVFPT--KAKFIIQASLDGHKKFWKKSRISGVEFVKHFR--AHLGVILSLAVSYDGWLFRSVEDPDHSVKVFD   82 (558)
T ss_pred             cccceeeeEeee--hhheEEeeecchhhhhcCCCCccceeehhhhH--HHHHHHHhhhccccceeEeeccCcccceeEEE
Confidence            488889988776  488999999999999997543   22333333  55555544  4678888999777 99999999


Q ss_pred             cCCCCccccccccCCCeEEEEEec-cC---CEEE-EeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccC
Q psy8152         114 YKTEPDQWTNFNVGPQLECMKHNK-HS---NIIA-TGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~-~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      +.+-..+. ..........+.|.. .|   ..|+ +.-.++.+.++|-....  ....-+.|..                
T Consensus        83 vEn~Dmin-miKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~s----------------  145 (558)
T KOG0882|consen   83 VENFDMIN-MIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFS----------------  145 (558)
T ss_pred             eeccchhh-hcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccC----------------
Confidence            98766553 222211222233322 22   1333 33457889999977632  3333334444                


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc-------------ceEEEeCCCCCeeEEEEccCCCEEEEEcCC
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR-------------PVLKVDIPDVALSCITTTNQSHYVIVGSTT  253 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  253 (444)
                        +|.++.++|-+..+++....|.|..|... .....             -+..+.......+++.|+|++..+.+-+.|
T Consensus       146 --PV~~i~y~qa~Ds~vSiD~~gmVEyWs~e-~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~D  222 (558)
T KOG0882|consen  146 --PVKKIRYNQAGDSAVSIDISGMVEYWSAE-GPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPD  222 (558)
T ss_pred             --ceEEEEeeccccceeeccccceeEeecCC-CcccCccccccccccccchhhcccccccCccceEEccccCcccccCcc
Confidence              79999999999999999999999999887 10001             111122335567899999999999999999


Q ss_pred             CcEEEEEcCCCCcceeEecc--------------------------------cc-CceeEEEecCCCCEEEEEECCCcEE
Q psy8152         254 GDMMAVDLRGKGKPCYKYKG--------------------------------FA-GCVKDIACPLNENLILSVSLDRHFR  300 (444)
Q Consensus       254 g~i~iwd~~~~~~~~~~~~~--------------------------------h~-~~i~~~~~s~~~~~l~s~~~dg~i~  300 (444)
                      ..|+++.+++ ++.++.+..                                |. ..-+.+.|...+++|+-++-=| |+
T Consensus       223 rkVR~F~~Kt-GklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ik  300 (558)
T KOG0882|consen  223 RKVRGFVFKT-GKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IK  300 (558)
T ss_pred             cEEEEEEecc-chhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EE
Confidence            9999999998 765544321                                11 1234567888889998887665 89


Q ss_pred             EEEcCCCceEEEeecCCce
Q psy8152         301 VHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       301 vw~~~~~~~~~~~~~~~~i  319 (444)
                      |.++.++.+.+.+.....+
T Consensus       301 vin~~tn~v~ri~gk~e~i  319 (558)
T KOG0882|consen  301 VINLDTNTVVRILGKDEAI  319 (558)
T ss_pred             EEEeecCeEEEEeccchhh
Confidence            9999999887766543333

>KOG2695|consensus

Probab=99.11  E-value=3.6e-10  Score=95.75  Aligned_cols=151  Identities=13%  Similarity=0.141  Sum_probs=117.0

Q ss_pred             EEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-----eeeeeeecccceeeEe
Q psy8152         101 LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-----KNIFSAKNVSHRVLVY  175 (444)
Q Consensus       101 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-----~~~~~~~~~~~~~~~~  175 (444)
                      ++.+.+-.|-+-++.++-..  .+...+.|.++.|...++++..|...|.|..+|++.+     .+...+. |..     
T Consensus       228 fs~G~sqqv~L~nvetg~~q--sf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~S-----  299 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQ--SFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDS-----  299 (425)
T ss_pred             ecccccceeEEEEeeccccc--ccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCc-----
Confidence            55667778899999988765  4457788999999988999999999999999999874     2333332 222     


Q ss_pred             eeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE--EccCCCEEEEEcC
Q psy8152         176 SVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT--TTNQSHYVIVGST  252 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~~~  252 (444)
                                   .|+++.... .+++|++.+.+|+|++||++...-++.+.++.+|...-.-+-  ..+....|++++.
T Consensus       300 -------------svtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~Gd  366 (425)
T KOG2695|consen  300 -------------SVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGD  366 (425)
T ss_pred             -------------chhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccC
Confidence                         588888766 668999999999999999993233334888888865433333  3455678889999


Q ss_pred             CCcEEEEEcCCCCcceeEecc
Q psy8152         253 TGDMMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~~  273 (444)
                      |...|||.++. +.++.+++-
T Consensus       367 DcytRiWsl~~-ghLl~tipf  386 (425)
T KOG2695|consen  367 DCYTRIWSLDS-GHLLCTIPF  386 (425)
T ss_pred             eeEEEEEeccc-CceeeccCC
Confidence            99999999999 999988873

>KOG3914|consensus

Probab=99.10  E-value=2.2e-09  Score=92.95  Aligned_cols=159  Identities=14%  Similarity=0.129  Sum_probs=109.1

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEE---EEcCCeEEEEeCCCCcccc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI---AYSGQKIKIYDTDFKNFNT   79 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~---~~~d~~i~vw~~~~~~~~~   79 (444)
                      +..+..|+++.......++++.......+.+....   -...-+++.|. .+......   ++....+.+|....+.+..
T Consensus        71 s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~---v~~~~~ai~~~-~~~~sv~v~dkagD~~~~di~s~~~~~~~~  146 (390)
T KOG3914|consen   71 SDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC---VPKRPTAISFI-REDTSVLVADKAGDVYSFDILSADSGRCEP  146 (390)
T ss_pred             CCCceEEEEEeCCCceEEEEEecCCCcceeeeEee---cccCcceeeee-eccceEEEEeecCCceeeeeecccccCcch
Confidence            45567888888888888888765542112222222   22333444444 33344433   3334566666666555555


Q ss_pred             ceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          80 NTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        80 ~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      .+   +|-..++.  ++||+++|+++..|..|+|-.+.....+. ..++|..-|..++..+ +..|++||.|++|++||+
T Consensus       147 ~l---GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~  222 (390)
T KOG3914|consen  147 IL---GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDI  222 (390)
T ss_pred             hh---hhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEec
Confidence            54   77777765  48999999999999999998877655444 3567999999999986 456899999999999999


Q ss_pred             CCceeeeeeeccc
Q psy8152         157 NTTKNIFSAKNVS  169 (444)
Q Consensus       157 ~~~~~~~~~~~~~  169 (444)
                      .+++++.++....
T Consensus       223 ~sgk~L~t~dl~s  235 (390)
T KOG3914|consen  223 TSGKLLDTCDLSS  235 (390)
T ss_pred             ccCCcccccchhH
Confidence            9999887665433

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.09  E-value=1.1e-07  Score=82.40  Aligned_cols=231  Identities=14%  Similarity=0.114  Sum_probs=142.3

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS   94 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s   94 (444)
                      +|.|..||..+++..    .....-.-.....+..+  +.+..+++++.++.|+.||..+|+.+..+.........  ..
T Consensus         2 ~g~l~~~d~~tG~~~----W~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~--~~   73 (238)
T PF13360_consen    2 DGTLSALDPRTGKEL----WSYDLGPGIGGPVATAV--PDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA--PV   73 (238)
T ss_dssp             TSEEEEEETTTTEEE----EEEECSSSCSSEEETEE--EETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG--EE
T ss_pred             CCEEEEEECCCCCEE----EEEECCCCCCCccceEE--EeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce--ee
Confidence            688999998888742    11111010122222222  24778888889999999999999998887753321111  23


Q ss_pred             eCCCeEEEEecCCcEEEEEcCCCCccccc-cccC---CCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccc
Q psy8152          95 RYDECILTAVKSGDVKLWRYKTEPDQWTN-FNVG---PQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSH  170 (444)
Q Consensus        95 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~  170 (444)
                      ..+..+++++.++.|+.+|..+++.++.. ....   ...........+..++.+..++.|..+|+.+|+.+........
T Consensus        74 ~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~  153 (238)
T PF13360_consen   74 VDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEP  153 (238)
T ss_dssp             EETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT
T ss_pred             ecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCC
Confidence            45666677778889999999999998753 3221   1122333333578888888899999999999999888766432


Q ss_pred             eee-EeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         171 RVL-VYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       171 ~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                      ... .+.         ....+..-....++ .++.++.++.+..+|+.   ....+....  ...+..+ ..+.+..|++
T Consensus       154 ~~~~~~~---------~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~---tg~~~w~~~--~~~~~~~-~~~~~~~l~~  217 (238)
T PF13360_consen  154 RGSSPIS---------SFSDINGSPVISDG-RVYVSSGDGRVVAVDLA---TGEKLWSKP--ISGIYSL-PSVDGGTLYV  217 (238)
T ss_dssp             -SS--EE---------EETTEEEEEECCTT-EEEEECCTSSEEEEETT---TTEEEEEEC--SS-ECEC-EECCCTEEEE
T ss_pred             CCCccee---------eecccccceEEECC-EEEEEcCCCeEEEEECC---CCCEEEEec--CCCccCC-ceeeCCEEEE
Confidence            000 000         00011222222234 67777777754444988   555554333  2223331 3456778888


Q ss_pred             EcCCCcEEEEEcCCCCcceeE
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      ++.++.|..||+++ ++.+.+
T Consensus       218 ~~~~~~l~~~d~~t-G~~~W~  237 (238)
T PF13360_consen  218 TSSDGRLYALDLKT-GKVVWQ  237 (238)
T ss_dssp             EETTTEEEEEETTT-TEEEEE
T ss_pred             EeCCCEEEEEECCC-CCEEeE
Confidence            87999999999999 887654

...

>KOG1912|consensus

Probab=99.09  E-value=4.7e-08  Score=91.73  Aligned_cols=243  Identities=9%  Similarity=0.070  Sum_probs=167.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeC------------CCeEEEEec
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRY------------DECILTAVK  105 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~------------~~~l~~~~~  105 (444)
                      .|...-.++.|+|  +.+||.|+. ..|.+-|..+.+.+..+..  |...|+.+  +|-            .-+|+++..
T Consensus        13 l~~sN~~A~Dw~~--~GLiAygsh-slV~VVDs~s~q~iqsie~--h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~   87 (1062)
T KOG1912|consen   13 LSRSNRNAADWSP--SGLIAYGSH-SLVSVVDSRSLQLIQSIEL--HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI   87 (1062)
T ss_pred             CCcccccccccCc--cceEEEecC-ceEEEEehhhhhhhhcccc--CccceeEEEeccCCCchhccCccccceeEEeccc
Confidence            3445567888994  778888887 6899999988888888864  45555554  321            124777888


Q ss_pred             CCcEEEEEcCCCCccccccccCCCeEEEEEec---cC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         106 SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK---HS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       106 dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      .|.|.+||...+..+..+..|..++..++|-+   +. ..|+.-.....|.+|+..+|+.+.+......           
T Consensus        88 ~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~-----------  156 (1062)
T KOG1912|consen   88 SGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE-----------  156 (1062)
T ss_pred             cCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCc-----------
Confidence            89999999998877766778899999999987   33 4566666678999999999999988765555           


Q ss_pred             ccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCC-CCCccceEEE---eCCCC----------------------C
Q psy8152         182 FDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKI-TTQRRPVLKV---DIPDV----------------------A  234 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~---~~~~~----------------------~  234 (444)
                             ...|+.+.|-. +.+..-+..|.+.+-+.-. +....+.+.+   ..|..                      .
T Consensus       157 -------iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~f  229 (1062)
T KOG1912|consen  157 -------ILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYF  229 (1062)
T ss_pred             -------ceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhH
Confidence                   35556666644 5555555556665555431 0111111111   11100                      0


Q ss_pred             ---eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC--CEEEEEECCCcEEEEEcCC
Q psy8152         235 ---LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE--NLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       235 ---i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~--~~l~s~~~dg~i~vw~~~~  306 (444)
                         ...++|+|.-+-++.......+.|+|++- ..++....-..+.+.-+.+-|+.  ..|++.-.+|.+.+|-.+.
T Consensus       230 ity~a~faf~p~~rn~lfi~~prellv~dle~-~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  230 ITYCAQFAFSPHWRNILFITFPRELLVFDLEY-ECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             HHHHHhhhcChhhhceEEEEeccceEEEcchh-hceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence               12356788655455555667799999998 88888888667767777787766  4899999999999997654

>KOG4649|consensus

Probab=99.09  E-value=1.4e-07  Score=77.44  Aligned_cols=142  Identities=10%  Similarity=-0.050  Sum_probs=97.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ..+++.|+..+.+...|..++...-..+-       ...|-+-+.-  -+++++.|+..|.+++.+..+|.....+...+
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~il-------g~RiE~sa~v--vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~   93 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-------GVRIECSAIV--VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE   93 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhh-------CceeeeeeEE--ECCEEEEEEccCcEEEEEecchhheeeeeehh
Confidence            57889999999999999999885322111       3444444433  27889999999999999999998888776533


Q ss_pred             ccccEEE-EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          86 GEGDIVG-VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        86 ~~~~v~~-~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                       ...+.+ +.+++.++..++.|++.+..|.++..++++.......-.+-+..|-...|+.+...|.+.--..+
T Consensus        94 -~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~  165 (354)
T KOG4649|consen   94 -TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKN  165 (354)
T ss_pred             -hhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccC
Confidence             333433 47899999999999999999999999987544333333444555622334444444555443333

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=1.8e-07  Score=87.16  Aligned_cols=206  Identities=9%  Similarity=0.007  Sum_probs=124.9

Q ss_pred             cceEEEeeeccCCcE-EEEEEc---CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEE-ecC--CcEEEEEcC
Q psy8152          43 ASVLALNWGNVEESE-LLIAYS---GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTA-VKS--GDVKLWRYK  115 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~-l~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~-~~d--g~i~iw~~~  115 (444)
                      +.+....|+ |+++. ++..+.   ...|+++|+.+++....... ........++|+|+.|+.. +.+  ..|.++++.
T Consensus       188 ~~~~~p~wS-pDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~-~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~  265 (419)
T PRK04043        188 GLNIFPKWA-NKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASS-QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN  265 (419)
T ss_pred             CCeEeEEEC-CCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecC-CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECC
Confidence            367789999 78874 554433   35799999988876555432 2223346689999876543 333  568888888


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCC-C--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE-N--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                      ++.... +..+........|+|+|+.|+..+.. +  .|.++++.+++...... ...                    ..
T Consensus       266 ~g~~~~-LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g~--------------------~~  323 (419)
T PRK04043        266 TKTLTQ-ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF-HGK--------------------NN  323 (419)
T ss_pred             CCcEEE-cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc-CCC--------------------cC
Confidence            776553 44444334556899999888776642 2  57777877665432211 111                    12


Q ss_pred             EEEecCCCEEEEEeCC---------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-C--cEEEEE
Q psy8152         193 ISFLPNSDKVAVCSKQ---------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-G--DMMAVD  260 (444)
Q Consensus       193 ~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~iwd  260 (444)
                      ..|+|+|++|+..+..         ..|.+.|+.   ... ...+... .......|+|+|+.|+..+.. +  .|.+++
T Consensus       324 ~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~---~g~-~~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~  398 (419)
T PRK04043        324 SSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN---SDY-IRRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIR  398 (419)
T ss_pred             ceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC---CCC-eEECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEe
Confidence            4899999888766543         367888887   222 2333322 223458899999988765433 2  355666


Q ss_pred             cCCCCcceeEeccccCcee
Q psy8152         261 LRGKGKPCYKYKGFAGCVK  279 (444)
Q Consensus       261 ~~~~~~~~~~~~~h~~~i~  279 (444)
                      +.  +.....+....+.+.
T Consensus       399 l~--g~~~~~l~~~~g~~~  415 (419)
T PRK04043        399 LN--YNKSFLFPLKVGKIQ  415 (419)
T ss_pred             cC--CCeeEEeecCCCccC
Confidence            64  444444543334343

>KOG1275|consensus

Probab=99.06  E-value=3.5e-09  Score=100.79  Aligned_cols=186  Identities=16%  Similarity=0.153  Sum_probs=145.2

Q ss_pred             CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEE
Q psy8152          54 EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECM  133 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~  133 (444)
                      ++..++.|+....+..+|+.+.+..+.....  ...|.-+..+++++++|...|+|.+-|..+.+.+.++..|.+.|..+
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~--a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf  223 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVS--ASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF  223 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeecc--CCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence            3566777777778888999888877776543  33477778899999999999999999999999999999999999988


Q ss_pred             EEeccCCEEEEeeC---------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEE
Q psy8152         134 KHNKHSNIIATGGK---------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVA  203 (444)
Q Consensus       134 ~~~~~~~~l~~~~~---------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~  203 (444)
                      ..  .|++|+++|.         |.-|+|||++..+.+..+.-+..                   ..-+.|+|.- ..++
T Consensus       224 Dv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~-------------------P~flrf~Psl~t~~~  282 (1118)
T KOG1275|consen  224 DV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG-------------------PQFLRFHPSLTTRLA  282 (1118)
T ss_pred             ec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC-------------------chhhhhcccccceEE
Confidence            77  6899999886         45678999998776655554444                   3456788865 7888


Q ss_pred             EEeCCceEEEEEcCCC-CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         204 VCSKQGYVRVYDPKIT-TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                      +++..|...+-|..+- .....+..+......+..+.++++++.|+.|..+|.|.+|.-+
T Consensus       283 V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~  342 (1118)
T KOG1275|consen  283 VTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWADR  342 (1118)
T ss_pred             EEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence            9999999999994410 1223334444455569999999999999999999999999843

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.05  E-value=8.1e-07  Score=77.32  Aligned_cols=209  Identities=16%  Similarity=0.074  Sum_probs=133.7

Q ss_pred             EEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEe-ccCCEEEEeeCCCeEEEEEcCCceeeeeeecccc
Q psy8152          93 VSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN-KHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSH  170 (444)
Q Consensus        93 ~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~  170 (444)
                      +.+ ++.++++-...+.|+.|+..++....  ..... ...+++. +++ .|+.+... .+.++|+.+++..........
T Consensus         7 ~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~--~~~~~-~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~~~~~   81 (246)
T PF08450_consen    7 WDPRDGRLYWVDIPGGRIYRVDPDTGEVEV--IDLPG-PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLADLPDG   81 (246)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTTTEEEE--EESSS-EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEEEETT
T ss_pred             EECCCCEEEEEEcCCCEEEEEECCCCeEEE--EecCC-CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEeeccCC
Confidence            344 45666766678899999988776542  22222 7777887 564 45555544 456669888754433332100


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC--------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ--------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                                   .......+.+++.|+|++.++....        |.|..++..    .+. ..+...-...+.|+|+|
T Consensus        82 -------------~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~----~~~-~~~~~~~~~pNGi~~s~  143 (246)
T PF08450_consen   82 -------------GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD----GKV-TVVADGLGFPNGIAFSP  143 (246)
T ss_dssp             -------------CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT----SEE-EEEEEEESSEEEEEEET
T ss_pred             -------------CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC----CeE-EEEecCcccccceEECC
Confidence                         0012258999999999977776543        456666654    222 22222234468999999


Q ss_pred             CCCEEE-EEcCCCcEEEEEcCCCCc------ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec
Q psy8152         243 QSHYVI-VGSTTGDMMAVDLRGKGK------PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM  315 (444)
Q Consensus       243 ~~~~l~-~~~~dg~i~iwd~~~~~~------~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~  315 (444)
                      +++.|+ +-+..+.|..|++...+.      .+..+....+..-.+++..+|++.++....+.|.+++.. |+++..+..
T Consensus       144 dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~  222 (246)
T PF08450_consen  144 DGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIEL  222 (246)
T ss_dssp             TSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-
T ss_pred             cchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcC
Confidence            998775 567788899999864222      122222222347789999999988888889999999988 888888775


Q ss_pred             C-CceeEEEEc
Q psy8152         316 Q-SRLTSILVR  325 (444)
Q Consensus       316 ~-~~i~~~~~~  325 (444)
                      . ..+++++|.
T Consensus       223 p~~~~t~~~fg  233 (246)
T PF08450_consen  223 PVPRPTNCAFG  233 (246)
T ss_dssp             SSSSEEEEEEE
T ss_pred             CCCCEEEEEEE
Confidence            5 678999984

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.02  E-value=9.4e-07  Score=84.63  Aligned_cols=292  Identities=14%  Similarity=0.167  Sum_probs=172.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc--CcccceE--EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI--TNKASVL--ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~--~h~~~v~--~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +..+++++.++.|+.+|..+++..-. +. ....  .+...+.  .+...  ++..++.++.++.|+.+|..+|+.+..+
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~-~~-~~~~~~~~~~~~~~~g~~~~--~~~~V~v~~~~g~v~AlD~~TG~~~W~~  136 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWR-YD-PKLPADRGCCDVVNRGVAYW--DPRKVFFGTFDGRLVALDAETGKQVWKF  136 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhce-eC-CCCCccccccccccCCcEEc--cCCeEEEecCCCeEEEEECCCCCEeeee
Confidence            46688888899999999988875211 10 1100  0000111  11222  2378888889999999999999998887


Q ss_pred             eeccccccEEEE----EeCCCeEEEEe---------cCCcEEEEEcCCCCccccccccCC--------------------
Q psy8152          82 DVSFGEGDIVGV----SRYDECILTAV---------KSGDVKLWRYKTEPDQWTNFNVGP--------------------  128 (444)
Q Consensus        82 ~~~~~~~~v~~~----s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~--------------------  128 (444)
                      ....+...-..+    ...+.+++.++         .++.|..+|..+++.++.......                    
T Consensus       137 ~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~  216 (488)
T cd00216         137 GNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGG  216 (488)
T ss_pred             cCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCC
Confidence            644321000111    11234555554         367899999999988874332111                    


Q ss_pred             Ce-EEEEEeccCCEEEEeeCCC------------------eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         129 QL-ECMKHNKHSNIIATGGKEN------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       129 ~v-~~~~~~~~~~~l~~~~~d~------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      .+ ...++.+.+.+++.++.++                  .|.-+|+.+++.+...+........+..       .....
T Consensus       217 ~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~-------~s~p~  289 (488)
T cd00216         217 TSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDG-------PNQPS  289 (488)
T ss_pred             CccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCccccc-------CCCCe
Confidence            01 1234444456777777655                  7999999999998876533220000000       00000


Q ss_pred             eeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE----------------
Q psy8152         190 VNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG----------------  250 (444)
Q Consensus       190 i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----------------  250 (444)
                      +..+. .-++   ..+++++.+|.+..+|..   +++.+......   ...++.+|  ..++.+                
T Consensus       290 ~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~---tG~~~W~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~  360 (488)
T cd00216         290 LADIK-PKDGKPVPAIVHAPKNGFFYVLDRT---TGKLISARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRC  360 (488)
T ss_pred             EEecc-ccCCCeeEEEEEECCCceEEEEECC---CCcEeeEeEee---ccccccCC--ceEEEccccccccCcccccCCC
Confidence            11111 0123   267788899999999999   77777655422   11233444  233332                


Q ss_pred             --cCCCcEEEEEcCCCCcceeEecccc--------Cce--eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc
Q psy8152         251 --STTGDMMAVDLRGKGKPCYKYKGFA--------GCV--KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR  318 (444)
Q Consensus       251 --~~dg~i~iwd~~~~~~~~~~~~~h~--------~~i--~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~  318 (444)
                        ..+|.|.-+|+.+ ++.+.+.....        .+.  ..++.  .+.+|+.++.+|.|+.+|..+|+.+.+......
T Consensus       361 ~~~~~G~l~AlD~~t-G~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~  437 (488)
T cd00216         361 KKPGKGGLAALDPKT-GKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRTPSG  437 (488)
T ss_pred             CCCCceEEEEEeCCC-CcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEECCCC
Confidence              2467888899998 88887766321        111  11222  457888889999999999999999988776555


Q ss_pred             ee
Q psy8152         319 LT  320 (444)
Q Consensus       319 i~  320 (444)
                      +.
T Consensus       438 ~~  439 (488)
T cd00216         438 IQ  439 (488)
T ss_pred             ce
Confidence            43

The alignment model contains an 8-bladed beta-propeller.

>KOG4714|consensus

Probab=99.00  E-value=1.6e-09  Score=88.43  Aligned_cols=161  Identities=10%  Similarity=0.070  Sum_probs=101.9

Q ss_pred             ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee-eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         125 NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       125 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      .|..+-.+-+.+-.++-++++..||.+.+++.+.-..+ .++.....                  .-.+.++...++.+.
T Consensus        87 ~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~------------------~~as~~~~~~~~~i~  148 (319)
T KOG4714|consen   87 KNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHS------------------GSASRKICRHGNSIL  148 (319)
T ss_pred             ccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccc------------------cccccceeecccEEe
Confidence            44444444444446778999999999999998761111 11100000                  111222333344443


Q ss_pred             EEeC-----CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         204 VCSK-----QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       204 ~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                      ++..     -+..+.|+++   ..+.+..-......|++++-+|. .+.+++|+.+|.+-+||.++...+...+..|+.+
T Consensus       149 s~~~g~~n~~d~~~a~~~~---p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~  225 (319)
T KOG4714|consen  149 SGGCGNWNAQDNFYANTLD---PIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAE  225 (319)
T ss_pred             cCCcceEeeccceeeeccc---ccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhh
Confidence            3321     2345566666   22111111112233889999986 4567779999999999999844566677799999


Q ss_pred             eeEEEecCCC-CEEEEEECCCcEEEEEcCC
Q psy8152         278 VKDIACPLNE-NLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       278 i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~  306 (444)
                      |+.+-|+|.. ..|++++.||.+..||..+
T Consensus       226 i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  226 IWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             hhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            9999999965 6899999999999999875

>KOG1275|consensus

Probab=98.98  E-value=8e-09  Score=98.44  Aligned_cols=183  Identities=14%  Similarity=0.154  Sum_probs=136.7

Q ss_pred             CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEe
Q psy8152          96 YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVY  175 (444)
Q Consensus        96 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  175 (444)
                      ++..++.|+....+..+|+.+.+..+...-....|.-++.  +++++.+|...|+|.+-|.++.+.++++..|.+     
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~-----  218 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG-----  218 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeecccc-----
Confidence            3456777888888888999887766533323334555554  678999999999999999999999999999988     


Q ss_pred             eeCCCcccccCccceeEEEEecCCCEEEEEeC---------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-CC
Q psy8152         176 SVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK---------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-SH  245 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~  245 (444)
                                   .|..+..  .|+.|++|+.         |..|+|||+|   ..+.+..+..+..+ .-+.|+|. ..
T Consensus       219 -------------siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLR---mmral~PI~~~~~P-~flrf~Psl~t  279 (1118)
T KOG1275|consen  219 -------------SISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLR---MMRALSPIQFPYGP-QFLRFHPSLTT  279 (1118)
T ss_pred             -------------ceeeeec--cCCeEEEeecccccccccccchhhhhhhh---hhhccCCcccccCc-hhhhhcccccc
Confidence                         5665444  6788888875         5678999999   55555555544443 55778886 56


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcc---eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKP---CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~---~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+++++..|...+-|..+...+   +..+......+..+.++++++.||.|..+|.|.+|.-
T Consensus       280 ~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  280 RLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             eEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            7888899999999994331222   3333334456999999999999999999999999973

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.98  E-value=2.3e-08  Score=83.93  Aligned_cols=225  Identities=15%  Similarity=0.223  Sum_probs=143.1

Q ss_pred             cccEEEEEe--CCCeEEEEecCCcEEEEEcCCCC-ccc----ccccc------------CCCeEEEEEec--cCCEEEEe
Q psy8152          87 EGDIVGVSR--YDECILTAVKSGDVKLWRYKTEP-DQW----TNFNV------------GPQLECMKHNK--HSNIIATG  145 (444)
Q Consensus        87 ~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~-~~~----~~~~~------------~~~v~~~~~~~--~~~~l~~~  145 (444)
                      ...|+++-.  .|.+|++|...|.|.+|.-.... |..    .+..|            ...|..+.|..  ....++..
T Consensus        26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls  105 (460)
T COG5170          26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS  105 (460)
T ss_pred             cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence            344555544  57899999888999999754322 111    12233            24577888876  44567777


Q ss_pred             eCCCeEEEEEcCCceeeee--------e----------------ecccceeeEeeeCCCcc-cccCccceeEEEEecCCC
Q psy8152         146 GKENDLKLWDLNTTKNIFS--------A----------------KNVSHRVLVYSVKPDEF-DLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       146 ~~d~~i~vwd~~~~~~~~~--------~----------------~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~  200 (444)
                      +.|.+|++|.+........        +                +.....-..++..|... ...|+..|+++.|+.+..
T Consensus       106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e  185 (460)
T COG5170         106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE  185 (460)
T ss_pred             cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence            8899999999865311000        0                00001111222223222 245666799999998877


Q ss_pred             EEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----CCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCC-----Cccee
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-----VALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGK-----GKPCY  269 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~-----~~~~~  269 (444)
                      .+++ ..|-.|.+|++......-.+..+++|.     .-|++..|+|. .+.+...+..|.|++-|++..     .+.+.
T Consensus       186 t~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf  264 (460)
T COG5170         186 TLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF  264 (460)
T ss_pred             eeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence            7766 457789999988333334444555664     35789999996 567777889999999999851     11111


Q ss_pred             Ee----------ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC-CceEEEe
Q psy8152         270 KY----------KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS-KKLLRKD  313 (444)
Q Consensus       270 ~~----------~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~-~~~~~~~  313 (444)
                      .+          .+-...|..+.|+++|+++++-.. -+|+|||++. ..++.++
T Consensus       265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi  318 (460)
T COG5170         265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTI  318 (460)
T ss_pred             hhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceee
Confidence            11          122357888999999999987543 5799999987 4556655

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.97  E-value=6.9e-06  Score=71.85  Aligned_cols=278  Identities=13%  Similarity=0.087  Sum_probs=169.0

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----------CCeEEEEeCCCCccccceeecc
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----------GQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----------d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +.++++|..+++. .-.+   .    .+-.-.+..+ |+++.+++++.          .-.|.+||.++......+.++.
T Consensus        17 ~rv~viD~d~~k~-lGmi---~----~g~~~~~~~s-pdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~   87 (342)
T PF06433_consen   17 SRVYVIDADSGKL-LGMI---D----TGFLGNVALS-PDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPP   87 (342)
T ss_dssp             EEEEEEETTTTEE-EEEE---E----EESSEEEEE--TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETT
T ss_pred             ceEEEEECCCCcE-EEEe---e----cccCCceeEC-CCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCC
Confidence            5789999888774 1111   1    2333446678 78988887532          3478999999988777766654


Q ss_pred             c-------cccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEE
Q psy8152          86 G-------EGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWD  155 (444)
Q Consensus        86 ~-------~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd  155 (444)
                      .       ......++.+++++++...  ...|.|.|+..++.+. ...-.+   |.-.-| ...-|.+-+.||.+.-..
T Consensus        88 k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~-ei~~PG---C~~iyP~~~~~F~~lC~DGsl~~v~  163 (342)
T PF06433_consen   88 KPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVG-EIDTPG---CWLIYPSGNRGFSMLCGDGSLLTVT  163 (342)
T ss_dssp             S-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEE-EEEGTS---EEEEEEEETTEEEEEETTSCEEEEE
T ss_pred             cchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceee-eecCCC---EEEEEecCCCceEEEecCCceEEEE
Confidence            2       2233567888888776543  4578899998888764 333333   333344 335688888899999999


Q ss_pred             cCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC---
Q psy8152         156 LNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP---  231 (444)
Q Consensus       156 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---  231 (444)
                      +.. |+...+..        -.|.++..     ..+..-++...+..++..+..|.|+-.|+. .........+...   
T Consensus       164 Ld~~Gk~~~~~t--------~~F~~~~d-----p~f~~~~~~~~~~~~~F~Sy~G~v~~~dls-g~~~~~~~~~~~~t~~  229 (342)
T PF06433_consen  164 LDADGKEAQKST--------KVFDPDDD-----PLFEHPAYSRDGGRLYFVSYEGNVYSADLS-GDSAKFGKPWSLLTDA  229 (342)
T ss_dssp             ETSTSSEEEEEE--------EESSTTTS------B-S--EEETTTTEEEEEBTTSEEEEEEET-TSSEEEEEEEESS-HH
T ss_pred             ECCCCCEeEeec--------cccCCCCc-----ccccccceECCCCeEEEEecCCEEEEEecc-CCcccccCcccccCcc
Confidence            984 65542211        12222211     012334455556666667899999999988 2222333333211   


Q ss_pred             -------CCCeeEEEEccCCCEEEEEc---CCC-------cEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEE
Q psy8152         232 -------DVALSCITTTNQSHYVIVGS---TTG-------DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSV  293 (444)
Q Consensus       232 -------~~~i~~~~~~~~~~~l~~~~---~dg-------~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~  293 (444)
                             .+.-.-+++++..+.|++.-   ..+       .|.++|+.+ ++.+.++.. ..++.+|+.+.+.+ +|++.
T Consensus       230 e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t-~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~  307 (342)
T PF06433_consen  230 EKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKT-HKRVARIPL-EHPIDSIAVSQDDKPLLYAL  307 (342)
T ss_dssp             HHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTT-TEEEEEEEE-EEEESEEEEESSSS-EEEEE
T ss_pred             ccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCC-CeEEEEEeC-CCccceEEEccCCCcEEEEE
Confidence                   12234577887655555421   222       388889999 999999883 34688999998764 77665


Q ss_pred             E-CCCcEEEEEcCCCceEEEeecCCceeEE
Q psy8152         294 S-LDRHFRVHDFHSKKLLRKDYMQSRLTSI  322 (444)
Q Consensus       294 ~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~  322 (444)
                      + .++.|.+||..+|+++.++..-+.-..+
T Consensus       308 ~~~~~~l~v~D~~tGk~~~~~~~lG~~~~l  337 (342)
T PF06433_consen  308 SAGDGTLDVYDAATGKLVRSIEQLGETPTL  337 (342)
T ss_dssp             ETTTTEEEEEETTT--EEEEE---SSS--E
T ss_pred             cCCCCeEEEEeCcCCcEEeehhccCCCceE
Confidence            4 5789999999999999988754443333

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.95  E-value=8.3e-07  Score=74.27  Aligned_cols=233  Identities=12%  Similarity=0.047  Sum_probs=125.1

Q ss_pred             cccEEEecCCCcEEEEEcCCCcc-ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKC-IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +..+++.-.|..|.|-.....-. .....+ +.. ...-.=+.++|| |++..||.+...|+|++||+....+ ..+...
T Consensus         8 ~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcq-Vpk-D~~PQWRkl~WS-pD~tlLa~a~S~G~i~vfdl~g~~l-f~I~p~   83 (282)
T PF15492_consen    8 DGKLLAILQDQCIEIRSAKDDFSSIIGKCQ-VPK-DPNPQWRKLAWS-PDCTLLAYAESTGTIRVFDLMGSEL-FVIPPA   83 (282)
T ss_pred             CCcEEEEEeccEEEEEeccCCchheeEEEe-cCC-CCCchheEEEEC-CCCcEEEEEcCCCeEEEEeccccee-EEcCcc
Confidence            34444445565666655433211 011111 111 222345789999 8999999999999999999975332 222110


Q ss_pred             ----c-ccccEEEEE---eC-----CCeEEEEecCCcEEEEEcCCCCcc--c-----ccc-ccCCCeEEEEEeccCCEEE
Q psy8152          85 ----F-GEGDIVGVS---RY-----DECILTAVKSGDVKLWRYKTEPDQ--W-----TNF-NVGPQLECMKHNKHSNIIA  143 (444)
Q Consensus        85 ----~-~~~~v~~~s---~~-----~~~l~~~~~dg~i~iw~~~~~~~~--~-----~~~-~~~~~v~~~~~~~~~~~l~  143 (444)
                          + -...|..+.   +.     ...|++-...|.++-|-+..+...  .     .+. .+...|.++.++|..++|+
T Consensus        84 ~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLl  163 (282)
T PF15492_consen   84 MSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLL  163 (282)
T ss_pred             cccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEE
Confidence                0 022333331   11     124666778888888876433211  1     111 2477899999999888888


Q ss_pred             EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CE-EEEEeCCc------eEEEEE
Q psy8152         144 TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DK-VAVCSKQG------YVRVYD  215 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-l~~~~~d~------~i~i~d  215 (444)
                      +|+....      +.+.  .  +....                  .+++-....+. .+ .++...++      +..+|.
T Consensus       164 VgG~~~~------~~~~--s--~a~~~------------------GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~  215 (282)
T PF15492_consen  164 VGGCEQN------QDGM--S--KASSC------------------GLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLR  215 (282)
T ss_pred             EeccCCC------CCcc--c--ccccc------------------CceEEEEcCCCCcEEEccccCccccccccccceee
Confidence            8875432      0000  0  00011                  11111111111 00 11111111      112332


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      +-   ..+...........|..|..||+|.+||+...+|.|.+|++.+ -++...+..+
T Consensus       216 ~~---~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPs-L~~~~~W~~~  270 (282)
T PF15492_consen  216 IP---SFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPS-LRLQRSWKQD  270 (282)
T ss_pred             cc---ceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCc-chhhcccchh
Confidence            22   1111111123456799999999999999999999999999998 7777766643

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.93  E-value=6.8e-06  Score=79.04  Aligned_cols=295  Identities=15%  Similarity=0.156  Sum_probs=169.7

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccce-------EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASV-------LALNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      +..|++++.++.|+-+|..+++..-. +. .........+       ..+++.   +..++.++.++.|.-.|..+|+.+
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~-~~-~~~~~~~~~~~~~~~~~rg~av~---~~~v~v~t~dg~l~ALDa~TGk~~  143 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWK-YD-PKLPDDVIPVMCCDVVNRGVALY---DGKVFFGTLDARLVALDAKTGKVV  143 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeE-ec-CCCCcccccccccccccccceEE---CCEEEEEcCCCEEEEEECCCCCEE
Confidence            46788888899999999998875211 11 1100000011       112333   467788888999999999999998


Q ss_pred             cceeeccccc--cEEEEEe--CCCeEEEEec------CCcEEEEEcCCCCccccccccC---------------------
Q psy8152          79 TNTDVSFGEG--DIVGVSR--YDECILTAVK------SGDVKLWRYKTEPDQWTNFNVG---------------------  127 (444)
Q Consensus        79 ~~~~~~~~~~--~v~~~s~--~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~---------------------  127 (444)
                      ..+....+..  .+.+ +|  .+..++++..      +|.|..+|..+++.++....-.                     
T Consensus       144 W~~~~~~~~~~~~~ts-sP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~t  222 (527)
T TIGR03075       144 WSKKNGDYKAGYTITA-APLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKT  222 (527)
T ss_pred             eecccccccccccccC-CcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCC
Confidence            7765422211  1111 12  2344555432      6889999999998876322211                     


Q ss_pred             ----------CCeE-EEEEeccCCEEEEeeCC-----C-----------eEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152         128 ----------PQLE-CMKHNKHSNIIATGGKE-----N-----------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       128 ----------~~v~-~~~~~~~~~~l~~~~~d-----~-----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (444)
                                ..+. .+++.|...+++.+...     +           .|.-.|+++|+....++...+         +
T Consensus       223 w~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~---------D  293 (527)
T TIGR03075       223 WPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPH---------D  293 (527)
T ss_pred             CCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCC---------C
Confidence                      0111 23555655566655421     1           567778888888877766555         2


Q ss_pred             cccccCccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEE--------E----eCCC-CC----------
Q psy8152         181 EFDLRRPVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLK--------V----DIPD-VA----------  234 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~----~~~~-~~----------  234 (444)
                      ..+........-+.+..+|+   .++.+..+|.+.+.|.+   +++++..        +    .... .+          
T Consensus       294 ~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~---tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~  370 (527)
T TIGR03075       294 EWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRT---NGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSAD  370 (527)
T ss_pred             CccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECC---CCceeccccccCCcccccccCCCCCCCccChhhCcCC
Confidence            22222222222233334564   77899999999999988   4444311        0    0000 00          


Q ss_pred             ------------------eeEEEEccCCCEEEEEcCC---------------------------------CcEEEEEcCC
Q psy8152         235 ------------------LSCITTTNQSHYVIVGSTT---------------------------------GDMMAVDLRG  263 (444)
Q Consensus       235 ------------------i~~~~~~~~~~~l~~~~~d---------------------------------g~i~iwd~~~  263 (444)
                                        -..++++|...++++...+                                 |.|.-+|+.+
T Consensus       371 ~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~t  450 (527)
T TIGR03075       371 GKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPIT  450 (527)
T ss_pred             CCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCC
Confidence                              0125666665555543332                                 4567777777


Q ss_pred             CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCcee
Q psy8152         264 KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLT  320 (444)
Q Consensus       264 ~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~  320 (444)
                       ++.+.+.+.......+. +.-.+.+++.++.+|.++.+|..+|+.+.+......+.
T Consensus       451 -Gk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~  505 (527)
T TIGR03075       451 -GKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIV  505 (527)
T ss_pred             -CceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCce
Confidence             77777665221111111 11245577778889999999999999998877554443

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG4649|consensus

Probab=98.90  E-value=2.3e-06  Score=70.45  Aligned_cols=269  Identities=12%  Similarity=0.075  Sum_probs=135.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +++++.|+..|.+++.+..++.. .-+++..      +.|.+-+-..+++..+..|+.|++.+..|..+..++...++.+
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~-~w~f~~~------~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG  135 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQ-IWNFVIL------ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGG  135 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhh-eeeeeeh------hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCC
Confidence            46799999999999999999964 2222222      2222222111568999999999999999999988888877655


Q ss_pred             ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEE--EEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLEC--MKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~--~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      ..-.-.++.+-...|..+...|.|.--..+..... .+-.  ..++|.+  ++   -+..+..+.-||.+.-++ ..|++
T Consensus       136 ~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~-~~w~~~~~~PiF~splc---v~~sv~i~~VdG~l~~f~-~sG~q  210 (354)
T KOG4649|consen  136 GTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSST-EFWAATRFGPIFASPLC---VGSSVIITTVDGVLTSFD-ESGRQ  210 (354)
T ss_pred             ceeccceecCCCceEEEEeccceEEEEccCCCCcc-eehhhhcCCccccCcee---ccceEEEEEeccEEEEEc-CCCcE
Confidence            44334455664444555556666555444433211 1111  1223322  11   123344445556665555 33444


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE-------EeCCCCC
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK-------VDIPDVA  234 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~  234 (444)
                      +........ +. .  .|-   ..++ ....+.+-..+-+.+..-..| -.+|..+   .+...+.       |..|+..
T Consensus       211 vwr~~t~Gp-If-~--~Pc---~s~P-s~q~i~~~~~~Cf~~~~p~~g-hL~w~~~---~g~t~~vy~~p~l~F~~h~~~  278 (354)
T KOG4649|consen  211 VWRPATKGP-IF-M--EPC---ESRP-SCQQISLENENCFCAPLPIAG-HLLWATQ---SGTTLHVYLSPKLRFDLHSPG  278 (354)
T ss_pred             EEeecCCCc-ee-c--ccc---cCCC-cceEEEEecCCeEEEeccccc-eEEEEec---CCcEEEEEeCcccceeccCCC
Confidence            443322111 00 0  000   0000 012222222222222222222 2245444   2211111       1122111


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCce---eEEE-----ec-C--CCCEEEEEECCCcEEEEE
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCV---KDIA-----CP-L--NENLILSVSLDRHFRVHD  303 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i---~~~~-----~s-~--~~~~l~s~~~dg~i~vw~  303 (444)
                      +.      ..++|..++.||.+.|.-.+.   .+.....|.+.+   ..+-     |+ |  -+.+|+.|+.|..|+.||
T Consensus       279 ~S------~~~ll~~~s~dgkv~il~~~~---sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cld  349 (354)
T KOG4649|consen  279 IS------YPKLLRRSSGDGKVMILMTSK---SLAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLD  349 (354)
T ss_pred             Cc------chhhhhhhcCCCcEEEEEecc---cccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeEEEEe
Confidence            11      145677789999887775443   344444444433   3222     22 2  124578889999999999


Q ss_pred             cCCC
Q psy8152         304 FHSK  307 (444)
Q Consensus       304 ~~~~  307 (444)
                      +.+.
T Consensus       350 l~~~  353 (354)
T KOG4649|consen  350 LDTW  353 (354)
T ss_pred             cccc
Confidence            9764

>KOG2066|consensus

Probab=98.86  E-value=1.5e-07  Score=89.03  Aligned_cols=184  Identities=12%  Similarity=0.147  Sum_probs=130.2

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      ....++|++++   ..+|+.|+..|.|++++.+.. ....+   .|...    .-.|.++++|+.||+|.|..+-+.+..
T Consensus        38 ~~D~is~~av~---~~~~~~GtH~g~v~~~~~~~~-~~~~~---~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~  106 (846)
T KOG2066|consen   38 QNDAISCCAVH---DKFFALGTHRGAVYLTTCQGN-PKTNF---DHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEI  106 (846)
T ss_pred             hhhHHHHHHhh---cceeeeccccceEEEEecCCc-ccccc---ccccc----ccCCceEEEecCCCcEEEeeccCCccc
Confidence            46788999998   799999999999999997633 33332   22222    457999999999999999998887766


Q ss_pred             ccccccCCCeEEEEEecc-----CCEEEEeeCCCeEEEEEcCC-ceee-eeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         121 WTNFNVGPQLECMKHNKH-----SNIIATGGKENDLKLWDLNT-TKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       121 ~~~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~vwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      . ......++.+++++|+     .+.+++|+..| +.++.-+= +... ..+...                  .++|.++
T Consensus       107 ~-~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~------------------eG~I~~i  166 (846)
T KOG2066|consen  107 T-QYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG------------------EGPIHSI  166 (846)
T ss_pred             e-eEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC------------------ccceEEE
Confidence            3 5566789999999995     67899999888 66665322 1111 112222                  2379999


Q ss_pred             EEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC------CeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV------ALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      .|.  |+++|-++.+| |++||+.   ..+.+..++....      ....+.|.+.. .|+.|-.| +|+|..++.
T Consensus       167 ~W~--g~lIAWand~G-v~vyd~~---~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d-~v~i~~I~~  234 (846)
T KOG2066|consen  167 KWR--GNLIAWANDDG-VKVYDTP---TRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGD-SVKICSIKK  234 (846)
T ss_pred             Eec--CcEEEEecCCC-cEEEecc---ccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCC-eEEEEEEec
Confidence            995  68899888775 8999998   5655555543322      23467787665 45555444 588888874

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.86  E-value=7.1e-09  Score=61.18  Aligned_cols=39  Identities=31%  Similarity=0.454  Sum_probs=36.7

Q ss_pred             CcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      ++++.++.+|.+.|++|+|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            357889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.85  E-value=4.7e-06  Score=72.03  Aligned_cols=229  Identities=9%  Similarity=-0.025  Sum_probs=142.6

Q ss_pred             ceEEEeeeccCCcEEEEEEcCC-eEEEEeCCCCccccceeeccccccE----EEEEeCCCeEEEEec-----CCcEEEEE
Q psy8152          44 SVLALNWGNVEESELLIAYSGQ-KIKIYDTDFKNFNTNTDVSFGEGDI----VGVSRYDECILTAVK-----SGDVKLWR  113 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~-~i~vw~~~~~~~~~~~~~~~~~~~v----~~~s~~~~~l~~~~~-----dg~i~iw~  113 (444)
                      ....++.+|.....++.+-.-| ...+||..+++....+...  ...-    -.|+++|++|++.-.     .|.|-|||
T Consensus         6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~--~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd   83 (305)
T PF07433_consen    6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAP--PGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYD   83 (305)
T ss_pred             cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCC--CCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEE
Confidence            3456777743566666676655 4778999999888776432  2222    357899999988643     48899999


Q ss_pred             cC-CCCccccccccCCCeEEEEEeccCCEEEEeeC------------------CCeEEEEEcCCceeeeeeecccceeeE
Q psy8152         114 YK-TEPDQWTNFNVGPQLECMKHNKHSNIIATGGK------------------ENDLKLWDLNTTKNIFSAKNVSHRVLV  174 (444)
Q Consensus       114 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~  174 (444)
                      .. +.+.+..+..|.-.-..+.+.|++..|+++.-                  +..+.+.|..+|+.+.+.....     
T Consensus        84 ~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~-----  158 (305)
T PF07433_consen   84 AARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPP-----  158 (305)
T ss_pred             CcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCc-----
Confidence            98 44555556666666778899999987777532                  1223344444444443322210     


Q ss_pred             eeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-------eEEEEEcCCCCCccceEEE-----eCCCCCeeEEEEcc
Q psy8152         175 YSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-------YVRVYDPKITTQRRPVLKV-----DIPDVALSCITTTN  242 (444)
Q Consensus       175 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~-----~~~~~~i~~~~~~~  242 (444)
                               ..+...|+.+++.++|..++..-..|       -|.+++..   ........     ..-...+-+|++++
T Consensus       159 ---------~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g---~~~~~~~~p~~~~~~l~~Y~gSIa~~~  226 (305)
T PF07433_consen  159 ---------DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG---GALRLLPAPEEQWRRLNGYIGSIAADR  226 (305)
T ss_pred             ---------cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC---CcceeccCChHHHHhhCCceEEEEEeC
Confidence                     01122588899988876655443322       23344433   11111111     12245688999999


Q ss_pred             CCCEEEE-EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC
Q psy8152         243 QSHYVIV-GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       243 ~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      ++.++++ +-.-+.+.+||..+ ++.+....-  ..++.++-.+++ +++|.+.
T Consensus       227 ~g~~ia~tsPrGg~~~~~d~~t-g~~~~~~~l--~D~cGva~~~~~-f~~ssG~  276 (305)
T PF07433_consen  227 DGRLIAVTSPRGGRVAVWDAAT-GRLLGSVPL--PDACGVAPTDDG-FLVSSGQ  276 (305)
T ss_pred             CCCEEEEECCCCCEEEEEECCC-CCEeecccc--CceeeeeecCCc-eEEeCCC
Confidence            9987765 45567899999999 888877653  346777776666 6666544

>KOG2114|consensus

Probab=98.84  E-value=1.4e-06  Score=83.23  Aligned_cols=211  Identities=9%  Similarity=0.147  Sum_probs=135.4

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE--eCCCeEEEEecCC-----cEEEEEcCC
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS--RYDECILTAVKSG-----DVKLWRYKT  116 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s--~~~~~l~~~~~dg-----~i~iw~~~~  116 (444)
                      .|+|+  + +.+..++.|+.+|.|.+++-. -+....|+...+. .+..+-  ....+|++.+.|+     .|+||++..
T Consensus        27 ~isc~--~-s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~s-iv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek  101 (933)
T KOG2114|consen   27 AISCC--S-SSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQS-IVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK  101 (933)
T ss_pred             ceeEE--c-CCCceEEEeeccccEEEeccc-ceeeehheecchh-hhhHhhcccCceEEEEEeecCCCCceEEEEecccc
Confidence            55554  4 568999999999999888743 3444555544333 233332  2335777776664     489999864


Q ss_pred             C------Cccc--cccc-----cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC--ceeeeeeecccceeeEeeeCCCc
Q psy8152         117 E------PDQW--TNFN-----VGPQLECMKHNKHSNIIATGGKENDLKLWDLNT--TKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       117 ~------~~~~--~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      -      +++.  ....     ...++.+++.+.+-+.+|+|-.+|.|.++.-.-  .+-....-.+.+           
T Consensus       102 ~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~-----------  170 (933)
T KOG2114|consen  102 VDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRG-----------  170 (933)
T ss_pred             cCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccC-----------
Confidence            3      2221  1222     356788999999989999999999999884321  111111111111           


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEc
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDL  261 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  261 (444)
                           ..+|+.+++..+++.++....-..|.+|.+.  +.......+..|...+.|..|++....+++++. ..+.+|+.
T Consensus       171 -----~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~--gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~s  242 (933)
T KOG2114|consen  171 -----KEPITGLALRSDGKSVLFVATTEQVMLYSLS--GRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDS  242 (933)
T ss_pred             -----CCCceeeEEecCCceeEEEEecceeEEEEec--CCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcC
Confidence                 3379999999888663333344589999998  222234447778888999999986654555543 35999998


Q ss_pred             CCCCcceeEec-cccCcee
Q psy8152         262 RGKGKPCYKYK-GFAGCVK  279 (444)
Q Consensus       262 ~~~~~~~~~~~-~h~~~i~  279 (444)
                      .. ..+-..|. +|.....
T Consensus       243 d~-~~~cfaf~~g~kk~~~  260 (933)
T KOG2114|consen  243 DG-RGPCFAFEVGEKKEML  260 (933)
T ss_pred             CC-cceeeeecCCCeEEEE
Confidence            87 67777777 7665443

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.83  E-value=1.4e-06  Score=82.25  Aligned_cols=93  Identities=16%  Similarity=0.116  Sum_probs=67.5

Q ss_pred             CceEEEEEcCCCCC-----ccceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcc------------ee
Q psy8152         208 QGYVRVYDPKITTQ-----RRPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKP------------CY  269 (444)
Q Consensus       208 d~~i~i~d~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~------------~~  269 (444)
                      ++.|.+.|.+   .     ...+..+.. ......+.++|+|+++++ +..++++.|+|+.+ .+.            +.
T Consensus       295 gn~V~VID~~---t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k-~k~~~~~~~~~~~~vva  369 (635)
T PRK02888        295 GSKVPVVDGR---KAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK-LDDLFDGKIKPRDAVVA  369 (635)
T ss_pred             CCEEEEEECC---ccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChh-hhhhhhccCCccceEEE
Confidence            4678888888   3     344444443 344689999999999877 45588999999987 442            33


Q ss_pred             EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         270 KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +..--.++ ...+|.++|+...|...|..|..|++..
T Consensus       370 evevGlGP-LHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        370 EPELGLGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             eeccCCCc-ceEEECCCCCEEEeEeecceeEEEehHH
Confidence            33322233 4678999999888888999999999876

>KOG2066|consensus

Probab=98.82  E-value=1.4e-07  Score=89.16  Aligned_cols=182  Identities=12%  Similarity=0.130  Sum_probs=131.6

Q ss_pred             EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152          90 IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus        90 v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      +.+....+++|+.|+.+|.|++++....-  .+.+.|...      ...|.++++|+.||+|.|..+-+.+...++.-+.
T Consensus        42 is~~av~~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~r  113 (846)
T KOG2066|consen   42 ISCCAVHDKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKR  113 (846)
T ss_pred             HHHHHhhcceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEecCC
Confidence            33444567899999999999999976443  345555544      4589999999999999999998877666554433


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecC-----CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPN-----SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                                         ++.+|+++|+     .+++++|+.-| +.++.-+--+....+ .+....++|.++.|  .|
T Consensus       114 -------------------piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W--~g  170 (846)
T KOG2066|consen  114 -------------------PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKW--RG  170 (846)
T ss_pred             -------------------cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEe--cC
Confidence                               4899999998     37899999988 888775511122222 45566889999999  58


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEeccccCc------eeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC------VKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~------i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++||-++..| |+|||+.+ ++.+..++.....      -..+.|.+..+ |+. |..-+|+|..++.
T Consensus       171 ~lIAWand~G-v~vyd~~~-~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVI-GW~d~v~i~~I~~  234 (846)
T KOG2066|consen  171 NLIAWANDDG-VKVYDTPT-RQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVI-GWGDSVKICSIKK  234 (846)
T ss_pred             cEEEEecCCC-cEEEeccc-cceeeccCCCCCCCCcccCCCceEecCCCe-EEE-ecCCeEEEEEEec
Confidence            8999888777 89999998 7777776633232      34567866544 444 4555788888873

>KOG2114|consensus

Probab=98.79  E-value=2e-06  Score=82.21  Aligned_cols=209  Identities=12%  Similarity=0.114  Sum_probs=135.7

Q ss_pred             cEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC-eEEEEEeccCCEEEEeeCCC-----eEEEEEcCCce--
Q psy8152          89 DIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ-LECMKHNKHSNIIATGGKEN-----DLKLWDLNTTK--  160 (444)
Q Consensus        89 ~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~--  160 (444)
                      .+.++++.+..++.|+.+|.|.+++-. .+.+..+..+... |..+....+.++|++.+.|+     .|+||++...+  
T Consensus        27 ~isc~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n  105 (933)
T KOG2114|consen   27 AISCCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN  105 (933)
T ss_pred             ceeEEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence            788889999999999999999888743 2232335555555 44444444546777776654     58999997631  


Q ss_pred             ----eee--eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-CCCccceEEEeCCCC
Q psy8152         161 ----NIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI-TTQRRPVLKVDIPDV  233 (444)
Q Consensus       161 ----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~  233 (444)
                          ++.  .+..+..        |     ..+.++.+++.+.+-+.+|+|-.+|.|..+.-.- ...+....-......
T Consensus       106 ~sP~c~~~~ri~~~~n--------p-----~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~  172 (933)
T KOG2114|consen  106 NSPQCLYEHRIFTIKN--------P-----TNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKE  172 (933)
T ss_pred             CCcceeeeeeeeccCC--------C-----CCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCC
Confidence                221  1111111        0     1234688999998889999999999999985330 001111111234567


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc-eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP-CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      +|+.+++..++..++-......|.+|.+.. ..+ +..+..|..+++|..|++....+++++. ..|.+|+.....+...
T Consensus       173 pITgL~~~~d~~s~lFv~Tt~~V~~y~l~g-r~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfa  250 (933)
T KOG2114|consen  173 PITGLALRSDGKSVLFVATTEQVMLYSLSG-RTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFA  250 (933)
T ss_pred             CceeeEEecCCceeEEEEecceeEEEEecC-CCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeee
Confidence            899999998887733333455699999986 443 4446778889999999876654555543 4588998876554444


Q ss_pred             e
Q psy8152         313 D  313 (444)
Q Consensus       313 ~  313 (444)
                      +
T Consensus       251 f  251 (933)
T KOG2114|consen  251 F  251 (933)
T ss_pred             e
Confidence            3

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.78  E-value=5.4e-06  Score=79.50  Aligned_cols=296  Identities=12%  Similarity=0.082  Sum_probs=167.0

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccc----cccEE--EEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccC
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG----EGDIV--GVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVG  127 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~----~~~v~--~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  127 (444)
                      +..++.++.++.|+-.|..+++.+..+.....    ...+.  .+...+ ..++.++.++.|+.+|.++++.++......
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~  140 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNND  140 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence            45677788889999999999998877654321    01111  112233 788888899999999999999887443322


Q ss_pred             CC--eEEEEEec--cCCEEEEee---------CCCeEEEEEcCCceeeeeeecccceeeEeee-CCCc-ccccCccce-e
Q psy8152         128 PQ--LECMKHNK--HSNIIATGG---------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSV-KPDE-FDLRRPVWV-N  191 (444)
Q Consensus       128 ~~--v~~~~~~~--~~~~l~~~~---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~i-~  191 (444)
                      ..  -..+.-+|  .+.+++.++         .++.|..+|..+++.+............... .+.. ........+ .
T Consensus       141 ~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~  220 (488)
T cd00216         141 QVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWA  220 (488)
T ss_pred             CcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccC
Confidence            10  01111122  234555554         3678999999999988877653220000000 0000 000000001 1


Q ss_pred             EEEEecCCCEEEEEeCCc------------------eEEEEEcCCCCCccceEEEeCCCCCe------eEEEEc----cC
Q psy8152         192 GISFLPNSDKVAVCSKQG------------------YVRVYDPKITTQRRPVLKVDIPDVAL------SCITTT----NQ  243 (444)
Q Consensus       192 ~~~~~~~~~~l~~~~~d~------------------~i~i~d~~~~~~~~~~~~~~~~~~~i------~~~~~~----~~  243 (444)
                      ..++.+.+..++.++.++                  .|.-+|..   +++.+..+.......      ....+.    -+
T Consensus       221 ~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~---tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~  297 (488)
T cd00216         221 SPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDAD---TGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKD  297 (488)
T ss_pred             CeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCC---CCCEEEEeeCCCCCCcccccCCCCeEEeccccC
Confidence            345555566777776655                  68888888   777777654221111      111111    12


Q ss_pred             CC---EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE------------------ECCCcEEEE
Q psy8152         244 SH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV------------------SLDRHFRVH  302 (444)
Q Consensus       244 ~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~------------------~~dg~i~vw  302 (444)
                      +.   .+++++.+|.++.+|.++ ++++......   ...++.+|  ..++.+                  ..+|.|...
T Consensus       298 g~~~~~V~~g~~~G~l~ald~~t-G~~~W~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~Al  371 (488)
T cd00216         298 GKPVPAIVHAPKNGFFYVLDRTT-GKLISARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAAL  371 (488)
T ss_pred             CCeeEEEEEECCCceEEEEECCC-CcEeeEeEee---ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEE
Confidence            32   678899999999999999 9998876521   11233444  222222                  246789999


Q ss_pred             EcCCCceEEEeecCCceeEEEEc-CCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         303 DFHSKKLLRKDYMQSRLTSILVR-SDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      |+.+|+.+.+........+..+. +.+.. .....+..+..++.+|.+..++..+++..
T Consensus       372 D~~tG~~~W~~~~~~~~~~~~~g~~~~~~-~~~~~g~~v~~g~~dG~l~ald~~tG~~l  429 (488)
T cd00216         372 DPKTGKVVWEKREGTIRDSWNIGFPHWGG-SLATAGNLVFAGAADGYFRAFDATTGKEL  429 (488)
T ss_pred             eCCCCcEeeEeeCCccccccccCCcccCc-ceEecCCeEEEECCCCeEEEEECCCCcee
Confidence            99999988776543111000000 00000 00012346667778999998888877654

The alignment model contains an 8-bladed beta-propeller.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.74  E-value=3e-05  Score=67.15  Aligned_cols=200  Identities=12%  Similarity=0.115  Sum_probs=128.8

Q ss_pred             EEEeC-CCeEEEEecCCc-EEEEEcCCCCccccccccCCC--eEEEEEeccCCEEEEee-----CCCeEEEEEcC-Ccee
Q psy8152          92 GVSRY-DECILTAVKSGD-VKLWRYKTEPDQWTNFNVGPQ--LECMKHNKHSNIIATGG-----KENDLKLWDLN-TTKN  161 (444)
Q Consensus        92 ~~s~~-~~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~-----~d~~i~vwd~~-~~~~  161 (444)
                      +++|. +..++.+-.-|+ ..+||..+++....+....+.  --..+|+++|++|++.-     ..|.|-|||.. +-+.
T Consensus        11 a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~r   90 (305)
T PF07433_consen   11 AAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRR   90 (305)
T ss_pred             eeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEE
Confidence            34553 344555555444 567888887766533222211  11358999999999854     35889999999 4566


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC------------------CceEEEEEcCCCCCcc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK------------------QGYVRVYDPKITTQRR  223 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------------d~~i~i~d~~~~~~~~  223 (444)
                      +..+..+.-                  ....+.+.|+++.|+++..                  +..+.+.|..   ++.
T Consensus        91 i~E~~s~GI------------------GPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~---sG~  149 (305)
T PF07433_consen   91 IGEFPSHGI------------------GPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDAR---SGA  149 (305)
T ss_pred             EeEecCCCc------------------ChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecC---CCc
Confidence            666666554                  4567888999977776532                  3345555555   444


Q ss_pred             ceEE--E--eCCCCCeeEEEEccCCCEEEEEcCCC-------cEEEEEcCCCCcceeEec-------cccCceeEEEecC
Q psy8152         224 PVLK--V--DIPDVALSCITTTNQSHYVIVGSTTG-------DMMAVDLRGKGKPCYKYK-------GFAGCVKDIACPL  285 (444)
Q Consensus       224 ~~~~--~--~~~~~~i~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~  285 (444)
                      .+.+  +  .-|...|..+++.++|..++..-..|       .|.+++.   +..+..+.       ...+.|-+|++++
T Consensus       150 ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~---g~~~~~~~~p~~~~~~l~~Y~gSIa~~~  226 (305)
T PF07433_consen  150 LLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR---GGALRLLPAPEEQWRRLNGYIGSIAADR  226 (305)
T ss_pred             eeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC---CCcceeccCChHHHHhhCCceEEEEEeC
Confidence            4444  4  23677899999999987666543333       2344433   33333332       3457889999999


Q ss_pred             CCCEEEEEE-CCCcEEEEEcCCCceEEEeec
Q psy8152         286 NENLILSVS-LDRHFRVHDFHSKKLLRKDYM  315 (444)
Q Consensus       286 ~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~  315 (444)
                      ++.++++.+ .-+.+.+||..+++++.....
T Consensus       227 ~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l  257 (305)
T PF07433_consen  227 DGRLIAVTSPRGGRVAVWDAATGRLLGSVPL  257 (305)
T ss_pred             CCCEEEEECCCCCEEEEEECCCCCEeecccc
Confidence            998775544 677899999999999876543

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.73  E-value=1.7e-05  Score=69.51  Aligned_cols=268  Identities=15%  Similarity=0.087  Sum_probs=159.4

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec----------CCcEEEEEcCCCCcccccc-cc------C
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK----------SGDVKLWRYKTEPDQWTNF-NV------G  127 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~-~~------~  127 (444)
                      ++++|+|..+++.+-.+..  .-..-..++|+++.+++++.          .-.|.+||..+-.....+. ..      .
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~   94 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV   94 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence            4799999999988877753  23333557999998877532          3469999998876554111 11      1


Q ss_pred             CCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         128 PQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      .....++++.++++++....  -..|.|.|+..++.+..+....                    +..+--++. ..|.+-
T Consensus        95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG--------------------C~~iyP~~~-~~F~~l  153 (342)
T PF06433_consen   95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG--------------------CWLIYPSGN-RGFSML  153 (342)
T ss_dssp             --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS--------------------EEEEEEEET-TEEEEE
T ss_pred             ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC--------------------EEEEEecCC-CceEEE
Confidence            12234567777777765432  4467788887777776654322                    222222222 567788


Q ss_pred             eCCceEEEEEcCCCCCccceEE--EeCCCCCe-eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce--eEecc-------
Q psy8152         206 SKQGYVRVYDPKITTQRRPVLK--VDIPDVAL-SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC--YKYKG-------  273 (444)
Q Consensus       206 ~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~-------  273 (444)
                      +.||++....+...++.....+  |.....++ ..-++...+..++--+..|.|+-.|+.. ....  ..+..       
T Consensus       154 C~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg-~~~~~~~~~~~~t~~e~~  232 (342)
T PF06433_consen  154 CGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSG-DSAKFGKPWSLLTDAEKA  232 (342)
T ss_dssp             ETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETT-SSEEEEEEEESS-HHHHH
T ss_pred             ecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccC-CcccccCcccccCccccc
Confidence            8999999998883222221111  11112222 2334555555555578899999988876 3321  12210       


Q ss_pred             ---ccCceeEEEecCCCCEEEEEEC---CC-------cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhc
Q psy8152         274 ---FAGCVKDIACPLNENLILSVSL---DR-------HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       274 ---h~~~i~~~~~s~~~~~l~s~~~---dg-------~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                         -.+.-.-+++++..+.|++.-.   ++       .|.++|+.+++.+.++....++.++.++.+       .++.++
T Consensus       233 ~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd-------~~P~L~  305 (342)
T PF06433_consen  233 DGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQD-------DKPLLY  305 (342)
T ss_dssp             TTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESS-------SS-EEE
T ss_pred             cCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccC-------CCcEEE
Confidence               0122344688876665555432   21       388889999999999998888999998866       333444


Q ss_pred             cccccCCCccccCCCcccccccc
Q psy8152         341 HSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       341 ~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      +....++.+.+||..++++....
T Consensus       306 ~~~~~~~~l~v~D~~tGk~~~~~  328 (342)
T PF06433_consen  306 ALSAGDGTLDVYDAATGKLVRSI  328 (342)
T ss_dssp             EEETTTTEEEEEETTT--EEEEE
T ss_pred             EEcCCCCeEEEEeCcCCcEEeeh
Confidence            44456789999999988766543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.68  E-value=6.5e-08  Score=56.99  Aligned_cols=38  Identities=16%  Similarity=0.253  Sum_probs=36.0

Q ss_pred             cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         223 RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       223 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      +++.++.+|...|++|+|+|++++|++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            56788999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1645|consensus

Probab=98.66  E-value=2.2e-06  Score=74.81  Aligned_cols=162  Identities=12%  Similarity=0.090  Sum_probs=103.3

Q ss_pred             EEEEEcCCCCccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         109 VKLWRYKTEPDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       109 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      |++.+..+.+....+..+...|..++|+|.. .++..++.++.|+|.|+++...+..+..+.                  
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~------------------  236 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYN------------------  236 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccC------------------
Confidence            6666655555555566688899999999944 488899999999999999988887777664                  


Q ss_pred             cceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeC--CCCCeeEEEEc------cCCCEEEEEcCCCcEEE
Q psy8152         188 VWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDI--PDVALSCITTT------NQSHYVIVGSTTGDMMA  258 (444)
Q Consensus       188 ~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~~~~------~~~~~l~~~~~dg~i~i  258 (444)
                       .+++++|..+. .+|..|-.+|.|.+||++  ....++..+.+  ...+|..++.-      +-|.+|+....+  +..
T Consensus       237 -~~wSC~wDlde~h~IYaGl~nG~VlvyD~R--~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f  311 (463)
T KOG1645|consen  237 -QIWSCCWDLDERHVIYAGLQNGMVLVYDMR--QPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQF  311 (463)
T ss_pred             -CceeeeeccCCcceeEEeccCceEEEEEcc--CCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhh
Confidence             49999999877 788889999999999999  22223332222  22344443332      234445444433  455


Q ss_pred             EEcCCC-CcceeEec-cccCceeEEEecCCCC-EEEEE
Q psy8152         259 VDLRGK-GKPCYKYK-GFAGCVKDIACPLNEN-LILSV  293 (444)
Q Consensus       259 wd~~~~-~~~~~~~~-~h~~~i~~~~~s~~~~-~l~s~  293 (444)
                      |.+... +.+...++ +..+...++++++-.+ .|++.
T Consensus       312 ~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~ty  349 (463)
T KOG1645|consen  312 YEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLLTY  349 (463)
T ss_pred             hhhhccccCCCcccccCCCcceeeeeecCccceEEEEe
Confidence            655431 22222222 2345556666666443 44443

>KOG1920|consensus

Probab=98.65  E-value=1.5e-05  Score=79.25  Aligned_cols=218  Identities=14%  Similarity=0.085  Sum_probs=132.7

Q ss_pred             cccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc----CCce
Q psy8152          87 EGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL----NTTK  160 (444)
Q Consensus        87 ~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~----~~~~  160 (444)
                      ...|.++..  +..-++.+...|.|.+-|..+.... ..-.....|.+++|+|+...++..+..+++.+-.-    -..+
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~  146 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEK  146 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcc
Confidence            457777753  6677888899999999988776655 23345778999999999999999888777765432    1111


Q ss_pred             eeee-------eecccceeeEeeeCCCc---------cccc------CccceeEEEEecCCCEEEEE-----eCCceEEE
Q psy8152         161 NIFS-------AKNVSHRVLVYSVKPDE---------FDLR------RPVWVNGISFLPNSDKVAVC-----SKQGYVRV  213 (444)
Q Consensus       161 ~~~~-------~~~~~~~~~~~~~~~~~---------~~~~------~~~~i~~~~~~~~~~~l~~~-----~~d~~i~i  213 (444)
                      ++..       +...+-....-.|+...         ...+      ....=++|.|--+|+++|+.     .....|++
T Consensus       147 ~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV  226 (1265)
T KOG1920|consen  147 PLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRV  226 (1265)
T ss_pred             ccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEE
Confidence            1100       00000000000111100         0000      11123468999999999873     33379999


Q ss_pred             EEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE---cCCCcEEEEEcCCC--CcceeEeccccCceeEEEecCCCC
Q psy8152         214 YDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG---STTGDMMAVDLRGK--GKPCYKYKGFAGCVKDIACPLNEN  288 (444)
Q Consensus       214 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~--~~~~~~~~~h~~~i~~~~~s~~~~  288 (444)
                      ||..    +..-..-......-.+++|-|.|..+++-   +.++.|.+|..+..  +...-.++.....|..++|+.++.
T Consensus       227 ~drE----g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd  302 (1265)
T KOG1920|consen  227 YDRE----GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD  302 (1265)
T ss_pred             eccc----chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC
Confidence            9976    21111112223344689999999999883   44567999874420  222222333344589999999999


Q ss_pred             EEEE---EECCCcEEEEEcCCCce
Q psy8152         289 LILS---VSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       289 ~l~s---~~~dg~i~vw~~~~~~~  309 (444)
                      .||+   ......|++|-+.+..-
T Consensus       303 iLAv~~~~~e~~~v~lwt~~NyhW  326 (1265)
T KOG1920|consen  303 ILAVVTSNLENSLVQLWTTGNYHW  326 (1265)
T ss_pred             ceeeeecccccceEEEEEecCeEE
Confidence            8887   44555599998877543

>KOG1645|consensus

Probab=98.65  E-value=1.9e-06  Score=75.24  Aligned_cols=236  Identities=12%  Similarity=0.107  Sum_probs=131.8

Q ss_pred             EEEEeCCCCccccceeeccccccEE--EEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEE
Q psy8152          67 IKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNII  142 (444)
Q Consensus        67 i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l  142 (444)
                      |++.+..+.+....+  +.+...|.  +|+|... ++..++.+.+|+|.|+.+..++..+..+ .++++++|.. +.++|
T Consensus       175 v~~l~~~~fkssq~l--p~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~I  251 (463)
T KOG1645|consen  175 VQKLESHDFKSSQIL--PGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVI  251 (463)
T ss_pred             eEEeccCCcchhhcc--cccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCccee
Confidence            444443333333322  34455554  4567555 7889999999999999999888766666 7899999988 56788


Q ss_pred             EEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEE------EecCCCEEEEEeCCceEEEEE
Q psy8152         143 ATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS------FLPNSDKVAVCSKQGYVRVYD  215 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~l~~~~~d~~i~i~d  215 (444)
                      +.|-..|.|.|||++..+ .+..+......                .+|..++      ..+.+.+|+....  -+..|.
T Consensus       252 YaGl~nG~VlvyD~R~~~~~~~e~~a~~t~----------------~pv~~i~~~~~n~~f~~gglLv~~lt--~l~f~e  313 (463)
T KOG1645|consen  252 YAGLQNGMVLVYDMRQPEGPLMELVANVTI----------------NPVHKIAPVQPNKIFTSGGLLVFALT--VLQFYE  313 (463)
T ss_pred             EEeccCceEEEEEccCCCchHhhhhhhhcc----------------CcceeecccCccccccccceEEeeeh--hhhhhh
Confidence            888899999999999743 22222221110                0233222      2233445554444  355677


Q ss_pred             cCCCC-CccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-------cEEE-EEcCCCCcceeEec-ccc-Cce------
Q psy8152         216 PKITT-QRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-------DMMA-VDLRGKGKPCYKYK-GFA-GCV------  278 (444)
Q Consensus       216 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~i~i-wd~~~~~~~~~~~~-~h~-~~i------  278 (444)
                      +..+. ...++..+ ...+...++++.+-.+.++.....+       .|-+ -|... +.++...+ +|. ++-      
T Consensus       314 i~~s~~~~p~vlel-e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~d-G~pVc~~r~~~~Gs~~~kl~t~  391 (463)
T KOG1645|consen  314 IVFSAECLPCVLEL-EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRD-GFPVCGKRRTYFGSKQTKLSTT  391 (463)
T ss_pred             hhccccCCCccccc-CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeecccc-CceeeeecccccCCcccccccc
Confidence            66111 11222222 2244455666666444444432221       0111 12222 33332222 121 100      


Q ss_pred             eEEEecCCCCEEEE-EECCCcEEEEEcCCCceEEEeecCCceeEEEEc
Q psy8152         279 KDIACPLNENLILS-VSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVR  325 (444)
Q Consensus       279 ~~~~~s~~~~~l~s-~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~  325 (444)
                      ..+.-.++.++|+. +..-+.+.+||..+.+.+.++....+|..+...
T Consensus       392 ~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~epv~Dicp~  439 (463)
T KOG1645|consen  392 QAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLALSEPVLDICPN  439 (463)
T ss_pred             cceeccccccEEEEecCCcceeEEeccchhheeeecccCcceeeccee
Confidence            11222345565554 445678999999999999999888888877654

>KOG3617|consensus

Probab=98.65  E-value=2.9e-06  Score=80.96  Aligned_cols=244  Identities=11%  Similarity=0.130  Sum_probs=153.3

Q ss_pred             EEEeeeccCCcEEEEEEc----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          46 LALNWGNVEESELLIAYS----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      +-..|+ |...+|++++.    .|.|.||- .+|++......+.|. ...|++|..-.|+.|-.-|.+.+|...+.+...
T Consensus        19 ti~SWH-PsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~ha-tSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht   95 (1416)
T KOG3617|consen   19 TISSWH-PSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVHA-TSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT   95 (1416)
T ss_pred             cccccC-CCCceeEEEEecCCCCceEEEEe-cCCCCCcccccceeh-hhhccChHHHHHhhccccceeEEEecCCceeee
Confidence            345688 78889888775    48898884 567765555433332 225666766678888888999999988877766


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec--c--cceeeE--eeeCCCc--------------
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN--V--SHRVLV--YSVKPDE--------------  181 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~--~~~~~~--~~~~~~~--------------  181 (444)
                      ....|+.+|..+.|+|+|..++++..-|.|.+|....-..+.....  |  ...+..  +.++|++              
T Consensus        96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgD  175 (1416)
T KOG3617|consen   96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGD  175 (1416)
T ss_pred             eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCc
Confidence            6777999999999999999999999999999998763211111110  0  011111  2223321              


Q ss_pred             ---ccccC----ccceeEEE--EecCCCEEEEEeCCceEEEEEcCCCCCccceEEE------------------------
Q psy8152         182 ---FDLRR----PVWVNGIS--FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV------------------------  228 (444)
Q Consensus       182 ---~~~~~----~~~i~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------------------  228 (444)
                         ++...    ...-.++.  =.|+|..++.++.+|+|+..|-.  +....+...                        
T Consensus       176 e~alD~~fnwk~~~a~rs~~ksgv~~g~~F~~~~~~GtVyyvdq~--g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~  253 (1416)
T KOG3617|consen  176 ESALDEPFNWKESLAERSDEKSGVPKGTEFLFAGKSGTVYYVDQN--GRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRD  253 (1416)
T ss_pred             hhhhcccccCccchhhccccccCCCCCcEEEEEcCCceEEEEcCC--CcEEEEEEccchHHHHHhcccceEEEEeeecee
Confidence               11100    00111111  13667778888888888877743  000000000                        


Q ss_pred             -------------------e---------------------------CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         229 -------------------D---------------------------IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       229 -------------------~---------------------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                                         .                           .....++|++++..+..|+.|...|.+.+|--.
T Consensus       254 ~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v  333 (1416)
T KOG3617|consen  254 CLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDV  333 (1416)
T ss_pred             eEEEecCCCchHHhhhhhhccccCCccCccccccccccccCCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeec
Confidence                               0                           012357899999888899999999999999643


Q ss_pred             C------CCcceeEecc---ccCceeEEEecCCCCEEEEEE
Q psy8152         263 G------KGKPCYKYKG---FAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       263 ~------~~~~~~~~~~---h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      .      |+.-..++.+   ..+.|+.+.|.|-.+.++..+
T Consensus       334 ~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~avn~  374 (1416)
T KOG3617|consen  334 NKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAVNT  374 (1416)
T ss_pred             CccccCCCCcceEEecCchhhccceEEEEeccccchhhhhh
Confidence            3      1223344443   346899999998655555444

>KOG1920|consensus

Probab=98.62  E-value=1.5e-05  Score=79.21  Aligned_cols=262  Identities=10%  Similarity=0.057  Sum_probs=145.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +.+.|+++...|.|.+.+..+...     ..+.  .-...|.+++|+ |++..++..+..+++.+-.- +-.++....+.
T Consensus        79 d~~~i~v~~~~G~iilvd~et~~~-----eivg--~vd~GI~aaswS-~Dee~l~liT~~~tll~mT~-~f~~i~E~~L~  149 (1265)
T KOG1920|consen   79 DTNSICVITALGDIILVDPETLEL-----EIVG--NVDNGISAASWS-PDEELLALITGRQTLLFMTK-DFEPIAEKPLD  149 (1265)
T ss_pred             ccceEEEEecCCcEEEEcccccce-----eeee--eccCceEEEeec-CCCcEEEEEeCCcEEEEEec-cccchhccccc
Confidence            457788999999999998776652     3333  246889999999 89999999998777766542 22222221110


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc-----c--ccc---ccCCCeEEEEEeccCCEEEEe-----eCCC
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ-----W--TNF---NVGPQLECMKHNKHSNIIATG-----GKEN  149 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-----~--~~~---~~~~~v~~~~~~~~~~~l~~~-----~~d~  149 (444)
                      ...      .+.+ .++.++....=.-+.-..++..     .  +..   .....=+.+.|--+|.++|+.     ..-.
T Consensus       150 ~d~------~~~s-k~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  150 ADD------ERKS-KFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             ccc------cccc-ccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence            000      0111 1222222211111111111110     0  000   112233468898899999983     2237


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE---eCCceEEEEEcCCCCCccceE
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC---SKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      .|+|||-. +..-..-.....                  --.+++|-|.|..+++-   +.++.|.+|..+.-..+....
T Consensus       223 kirV~drE-g~Lns~se~~~~------------------l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l  283 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSEPVEG------------------LQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVL  283 (1265)
T ss_pred             eEEEeccc-chhhcccCcccc------------------cccceeecCCCCeEeeeeecCCCCcEEEEecCCcccccccc
Confidence            89999977 332221111111                  24578999999888865   346689999876111122222


Q ss_pred             EEeCCCCCeeEEEEccCCCEEEE---EcCCCcEEEEEcCCCCcc--eeEeccccCceeEEEecCCC-CEEEEEECCCcEE
Q psy8152         227 KVDIPDVALSCITTTNQSHYVIV---GSTTGDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFR  300 (444)
Q Consensus       227 ~~~~~~~~i~~~~~~~~~~~l~~---~~~dg~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~  300 (444)
                      .++....++..++|+.++..|++   ......|++|-+.+ ..-  .+.+.-.....  +.|+|.. ..|..-..+|.+.
T Consensus       284 ~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N-yhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~  360 (1265)
T KOG1920|consen  284 PFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN-YHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRL  360 (1265)
T ss_pred             CCcccccchheeeecCCCCceeeeecccccceEEEEEecC-eEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEE
Confidence            23334455899999999999888   44455599998876 321  11222111111  6777743 2344444556555


Q ss_pred             EEEc
Q psy8152         301 VHDF  304 (444)
Q Consensus       301 vw~~  304 (444)
                      ++++
T Consensus       361 v~~~  364 (1265)
T KOG1920|consen  361 VRDF  364 (1265)
T ss_pred             EEEE
Confidence            5443

>KOG3621|consensus

Probab=98.60  E-value=1.1e-05  Score=75.58  Aligned_cols=117  Identities=14%  Similarity=0.140  Sum_probs=88.0

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      |...|.--++. ....+++.|+.-|.+++|+-.+++....-..-.+ ...+.+++++..++|.|+..|.|.++.+....+
T Consensus        32 ~~~~v~lTc~d-st~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p  110 (726)
T KOG3621|consen   32 FPARVKLTCVD-ATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP  110 (726)
T ss_pred             CcceEEEEEee-cCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence            44555555566 6799999999999999999876665543221111 233455688889999999999999998876433


Q ss_pred             cc------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152         120 QW------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus       120 ~~------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~  158 (444)
                      ..      .-..|+..|+|++|++++..+++|...|+|.+-.+..
T Consensus       111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            22      1122678899999999999999999999999988876

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.59  E-value=6.7e-05  Score=71.21  Aligned_cols=202  Identities=8%  Similarity=-0.030  Sum_probs=122.9

Q ss_pred             CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC----CcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          64 GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS----GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        64 d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      .+.+.+.|..+.+....+...+ ......++++|+++++.+.+    .++...+......+. .+. ...+  .++.++|
T Consensus       214 ~~~vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~v-vfn-i~~i--ea~vkdG  288 (635)
T PRK02888        214 RSLFTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVV-VFN-IARI--EEAVKAG  288 (635)
T ss_pred             eEEEEEEECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEE-EEc-hHHH--HHhhhCC
Confidence            3566777777777666665533 44566778899998887643    223333222111110 000 0000  0233467


Q ss_pred             CEEEEeeCCCeEEEEEcCC-----ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEE
Q psy8152         140 NIIATGGKENDLKLWDLNT-----TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRV  213 (444)
Q Consensus       140 ~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i  213 (444)
                      ++...+  ++.|.+.|.++     .+.+..+.....                   ...+.++|+|+++++++ .+.+|.+
T Consensus       289 K~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVGKs-------------------PHGV~vSPDGkylyVanklS~tVSV  347 (635)
T PRK02888        289 KFKTIG--GSKVPVVDGRKAANAGSALTRYVPVPKN-------------------PHGVNTSPDGKYFIANGKLSPTVTV  347 (635)
T ss_pred             CEEEEC--CCEEEEEECCccccCCcceEEEEECCCC-------------------ccceEECCCCCEEEEeCCCCCcEEE
Confidence            766663  57899999988     344555544443                   78899999998777655 4889999


Q ss_pred             EEcCCCCCccc------------eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC---------CcceeEec
Q psy8152         214 YDPKITTQRRP------------VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK---------GKPCYKYK  272 (444)
Q Consensus       214 ~d~~~~~~~~~------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~  272 (444)
                      +|+.   +.+.            +.+.....++ ...+|.++|+...+-.-|..|..|++...         ...+.++.
T Consensus       348 IDv~---k~k~~~~~~~~~~~~vvaevevGlGP-LHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~d  423 (635)
T PRK02888        348 IDVR---KLDDLFDGKIKPRDAVVAEPELGLGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLD  423 (635)
T ss_pred             EECh---hhhhhhhccCCccceEEEeeccCCCc-ceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceeccc
Confidence            9998   3322            3333333333 46789999988888889999999998750         12344444


Q ss_pred             cccCceeEE-----EecCCCCEEEEEEC
Q psy8152         273 GFAGCVKDI-----ACPLNENLILSVSL  295 (444)
Q Consensus       273 ~h~~~i~~~-----~~s~~~~~l~s~~~  295 (444)
                      -|..+..-.     .-.|+|++|++...
T Consensus       424 V~y~pgh~~~~~g~t~~~dgk~l~~~nk  451 (635)
T PRK02888        424 VHYQPGHNHASMGETKEADGKWLVSLNK  451 (635)
T ss_pred             CCCccceeeecCCCcCCCCCCEEEEccc
Confidence            444332211     23688999988753

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.58  E-value=0.00011  Score=68.17  Aligned_cols=114  Identities=13%  Similarity=0.117  Sum_probs=78.7

Q ss_pred             eeEEEEecCC-CEEEEE----eCCce----EEEEEcCCCCCccceEE-EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEE
Q psy8152         190 VNGISFLPNS-DKVAVC----SKQGY----VRVYDPKITTQRRPVLK-VDIPDVALSCITTTNQSHYVIVGSTTGDMMAV  259 (444)
Q Consensus       190 i~~~~~~~~~-~~l~~~----~~d~~----i~i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  259 (444)
                      ..++.|+... ..+.+.    +.+|.    -.+|++. ..+.+.+.. --.....+.+++++|+...|+.|+.||.|.+|
T Consensus       208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~-r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLy  286 (545)
T PF11768_consen  208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECS-RNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILY  286 (545)
T ss_pred             cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEee-cCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEE
Confidence            4566676533 444432    23332    3467766 112222211 12456779999999999999999999999999


Q ss_pred             EcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         260 DLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       260 d~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      |... +.  ..+..+.-..+.++|+|+|.++++|+..|.+.+||+.-.
T Consensus       287 D~~~-~~--t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  287 DTTR-GV--TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             EcCC-Ce--eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            9876 42  223234456788999999999999999999999998643

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.56  E-value=0.0007  Score=62.98  Aligned_cols=71  Identities=20%  Similarity=0.279  Sum_probs=59.8

Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      ..|.+++++|+...|+.|+.||.|.+||..   ..  +..+....-..+.++|+|+|.++++|+..|.|.+||+.-
T Consensus       260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~---~~--~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  260 SQVICCARSPSEDKLVLGCEDGSIILYDTT---RG--VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL  330 (545)
T ss_pred             CcceEEecCcccceEEEEecCCeEEEEEcC---CC--eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence            369999999999999999999999999988   22  222223445578999999999999999999999999875

>KOG1008|consensus

Probab=98.54  E-value=2.3e-08  Score=91.92  Aligned_cols=189  Identities=18%  Similarity=0.194  Sum_probs=126.2

Q ss_pred             CeEEEEecCCcEEEEEcCCCCcc--ccccccCCCeEEEEEec-cCCEEEEeeC----CCeEEEEEcCCc--eeeeeeecc
Q psy8152          98 ECILTAVKSGDVKLWRYKTEPDQ--WTNFNVGPQLECMKHNK-HSNIIATGGK----ENDLKLWDLNTT--KNIFSAKNV  168 (444)
Q Consensus        98 ~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~----d~~i~vwd~~~~--~~~~~~~~~  168 (444)
                      ..+++|..+|.|.+-.++...-.  ....++..+.++++|++ +.+.||.|-.    |..+.|||+.++  .+.......
T Consensus        71 cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs  150 (783)
T KOG1008|consen   71 CILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFS  150 (783)
T ss_pred             hhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccc
Confidence            45778888999999887654322  13556888999999999 7888888753    567999999875  221111100


Q ss_pred             cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEE
Q psy8152         169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN-QSHYV  247 (444)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l  247 (444)
                      ..               ......+++|..+.+++++|.....+.++|++  .+.....  ......+..+...| .+.|+
T Consensus       151 ~~---------------~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR--qs~~~~~--svnTk~vqG~tVdp~~~nY~  211 (783)
T KOG1008|consen  151 SS---------------TLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR--QSLDSVS--SVNTKYVQGITVDPFSPNYF  211 (783)
T ss_pred             cc---------------cccCccccccccCcchhhcccccchhhhhhhh--hhhhhhh--hhhhhhcccceecCCCCCce
Confidence            00               01135689999888999999999999999999  1111111  22233466677888 67787


Q ss_pred             EEEcCCCcEEEEE-cCCCCcceeEeccccC----ceeEEEecCCCC-EEEEEE-CCCcEEEEEcCC
Q psy8152         248 IVGSTTGDMMAVD-LRGKGKPCYKYKGFAG----CVKDIACPLNEN-LILSVS-LDRHFRVHDFHS  306 (444)
Q Consensus       248 ~~~~~dg~i~iwd-~~~~~~~~~~~~~h~~----~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~  306 (444)
                      ++-. +|.|.+|| .++-..++.++.....    .+..++|+|... ++++.+ ..++|+++++..
T Consensus       212 cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  212 CSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             eccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            7655 99999999 4442345544442222    488999999653 555555 457899998753

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.51  E-value=9.1e-05  Score=67.23  Aligned_cols=217  Identities=11%  Similarity=0.178  Sum_probs=125.2

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEe---eecc----CCcEEEEEEc----------CCeEEEEeCCCC---
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALN---WGNV----EESELLIAYS----------GQKIKIYDTDFK---   75 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~---~~~~----~~~~l~~~~~----------d~~i~vw~~~~~---   75 (444)
                      ..|++.|..+... ...+ .+.   ....+++++   |. .    ...+|++|+.          .|.|.++++...   
T Consensus         2 s~i~l~d~~~~~~-~~~~-~l~---~~E~~~s~~~~~l~-~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~   75 (321)
T PF03178_consen    2 SSIRLVDPTTFEV-LDSF-ELE---PNEHVTSLCSVKLK-GDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPEN   75 (321)
T ss_dssp             -EEEEEETTTSSE-EEEE-EEE---TTEEEEEEEEEEET-TS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS---
T ss_pred             cEEEEEeCCCCeE-EEEE-ECC---CCceEEEEEEEEEc-CccccccCEEEEEecccccccccccCcEEEEEEEEccccc
Confidence            3578888766653 1212 122   234455544   43 2    2578887765          289999999874   


Q ss_pred             -ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC-cccccccc--CCCeEEEEEeccCCEEEEeeCCCeE
Q psy8152          76 -NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP-DQWTNFNV--GPQLECMKHNKHSNIIATGGKENDL  151 (444)
Q Consensus        76 -~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i  151 (444)
                       ..+..+......++|.++.+-+.+|+++ ..+.|++|++...+ ... ...+  ...+.++..  .+++++.|..-..+
T Consensus        76 ~~~l~~i~~~~~~g~V~ai~~~~~~lv~~-~g~~l~v~~l~~~~~l~~-~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv  151 (321)
T PF03178_consen   76 NFKLKLIHSTEVKGPVTAICSFNGRLVVA-VGNKLYVYDLDNSKTLLK-KAFYDSPFYITSLSV--FKNYILVGDAMKSV  151 (321)
T ss_dssp             --EEEEEEEEEESS-EEEEEEETTEEEEE-ETTEEEEEEEETTSSEEE-EEEE-BSSSEEEEEE--ETTEEEEEESSSSE
T ss_pred             ceEEEEEEEEeecCcceEhhhhCCEEEEe-ecCEEEEEEccCcccchh-hheecceEEEEEEec--cccEEEEEEcccCE
Confidence             2222222234588899997766665554 45799999999887 443 2223  334555554  46699999888888


Q ss_pred             EEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC----CCCcc---
Q psy8152         152 KLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI----TTQRR---  223 (444)
Q Consensus       152 ~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~---  223 (444)
                      .++..+. ...+..+.....                +.+++++.|.++++.++++..+|.+.++....    .....   
T Consensus       152 ~~~~~~~~~~~l~~va~d~~----------------~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L  215 (321)
T PF03178_consen  152 SLLRYDEENNKLILVARDYQ----------------PRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKL  215 (321)
T ss_dssp             EEEEEETTTE-EEEEEEESS-----------------BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBE
T ss_pred             EEEEEEccCCEEEEEEecCC----------------CccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccc
Confidence            8876554 222222221111                23699999987767999999999999998771    01111   


Q ss_pred             -ceEEEeCCCCCeeEE---EEcc--CC------CEEEEEcCCCcEEEE
Q psy8152         224 -PVLKVDIPDVALSCI---TTTN--QS------HYVIVGSTTGDMMAV  259 (444)
Q Consensus       224 -~~~~~~~~~~~i~~~---~~~~--~~------~~l~~~~~dg~i~iw  259 (444)
                       .+..+.. ...|+++   ++.|  .+      ..++.++.+|.|.+.
T Consensus       216 ~~~~~f~l-g~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  216 ERISSFHL-GDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             EEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             eeEEEEEC-CCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence             2222332 3446666   4445  12      247778889988844

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG3617|consensus

Probab=98.46  E-value=1.6e-05  Score=76.18  Aligned_cols=111  Identities=13%  Similarity=0.124  Sum_probs=85.1

Q ss_pred             cccEEEEEeCCCeEEEEec----CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          87 EGDIVGVSRYDECILTAVK----SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      ...+.+++|...++++++.    .|.|.||- .+|++.. -...+-.+++++|+|..-.|+.|-.-|.+.+|...+.+.-
T Consensus        17 vsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr-~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h   94 (1416)
T KOG3617|consen   17 VSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQR-DVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH   94 (1416)
T ss_pred             cccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCc-ccccceehhhhccChHHHHHhhccccceeEEEecCCceee
Confidence            4556677788888887764    47788874 5566543 3333445678999998889999999999999998775544


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      .....|..                  +|..+.|+|+|..|+++..-|.|.+|...
T Consensus        95 tv~~th~a------------------~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   95 TVVETHPA------------------PIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eeccCCCC------------------CceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            43334444                  89999999999999999999999999876

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.45  E-value=0.0003  Score=67.90  Aligned_cols=209  Identities=13%  Similarity=0.102  Sum_probs=119.1

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeecccc--ccE-------EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE--GDI-------VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~--~~v-------~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      +..|++++.++.|+-+|..+|+.+-.+......  ...       ..+...+..++.++.++.|.-+|..+++.++....
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~  148 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSKKN  148 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeeccc
Confidence            567777888889999999999988776532211  010       11223456777888999999999999998874332


Q ss_pred             cC-CCeEEEEEec--cCCEEEEee------CCCeEEEEEcCCceeeeeeecccceeeE-------eeeCC-------Ccc
Q psy8152         126 VG-PQLECMKHNK--HSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVLV-------YSVKP-------DEF  182 (444)
Q Consensus       126 ~~-~~v~~~~~~~--~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~-------~~~~~-------~~~  182 (444)
                      .. ..-..+.-+|  .+..++++.      .+|.|..+|..+|+.+..+.........       ....|       +..
T Consensus       149 ~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~  228 (527)
T TIGR03075       149 GDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAW  228 (527)
T ss_pred             ccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCcc
Confidence            11 0001111122  233455543      2689999999999988776543321000       00000       000


Q ss_pred             cccCccce-eEEEEecCCCEEEEEeCC-----c-----------eEEEEEcCCCCCccceEEEeCCCCCe---------e
Q psy8152         183 DLRRPVWV-NGISFLPNSDKVAVCSKQ-----G-----------YVRVYDPKITTQRRPVLKVDIPDVAL---------S  236 (444)
Q Consensus       183 ~~~~~~~i-~~~~~~~~~~~l~~~~~d-----~-----------~i~i~d~~~~~~~~~~~~~~~~~~~i---------~  236 (444)
                      . .-...+ ..+++.|...+|..+..+     +           .|.-.|++   +++....++.....+         .
T Consensus       229 ~-~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~---TG~~~W~~Q~~~~D~wD~d~~~~p~  304 (527)
T TIGR03075       229 K-TGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPD---TGKIKWHYQTTPHDEWDYDGVNEMI  304 (527)
T ss_pred             c-cCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccc---cCCEEEeeeCCCCCCccccCCCCcE
Confidence            0 000111 133566655566555422     1           55666666   566655555321111         1


Q ss_pred             EEEEccCCC---EEEEEcCCCcEEEEEcCCCCcce
Q psy8152         237 CITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       237 ~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                      -+.+..+|+   .++.+..+|.++++|..+ ++++
T Consensus       305 l~d~~~~G~~~~~v~~~~K~G~~~vlDr~t-G~~i  338 (527)
T TIGR03075       305 LFDLKKDGKPRKLLAHADRNGFFYVLDRTN-GKLL  338 (527)
T ss_pred             EEEeccCCcEEEEEEEeCCCceEEEEECCC-Ccee
Confidence            122224665   778899999999999998 8876

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.40  E-value=0.00056  Score=63.94  Aligned_cols=223  Identities=10%  Similarity=0.033  Sum_probs=117.3

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      ....+..+.++ |+++++++ +.+|.-.||.....+....    + .+.-..|.+ .+.+|+-...++|.|+.--.....
T Consensus        31 ~~~~p~~ls~n-pngr~v~V-~g~geY~iyt~~~~r~k~~----G-~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~~~~  102 (443)
T PF04053_consen   31 CEIYPQSLSHN-PNGRFVLV-CGDGEYEIYTALAWRNKAF----G-SGLSFVWSS-RNRYAVLESSSTIKIYKNFKNEVV  102 (443)
T ss_dssp             -SS--SEEEE--TTSSEEEE-EETTEEEEEETTTTEEEEE----E-E-SEEEE-T-SSEEEEE-TTS-EEEEETTEE-TT
T ss_pred             CCcCCeeEEEC-CCCCEEEE-EcCCEEEEEEccCCccccc----C-ceeEEEEec-CccEEEEECCCeEEEEEcCccccc
Confidence            44567899999 78998888 4568888887332222211    1 233344445 445666666889999642222222


Q ss_pred             ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         121 WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       121 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      . .......+..+..   |.+|+..+.+ .|.+||+.+++.+..+...                    +|..+.|++++.
T Consensus       103 k-~i~~~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--------------------~vk~V~Ws~~g~  157 (443)
T PF04053_consen  103 K-SIKLPFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--------------------AVKYVIWSDDGE  157 (443)
T ss_dssp             ------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---------------------E-EEEEE-TTSS
T ss_pred             e-EEcCCcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--------------------CCcEEEEECCCC
Confidence            1 1122223444433   7777777654 8999999999998887522                    378999999999


Q ss_pred             EEEEEeCCceEEEEEcCCCCCc-----------cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQR-----------RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      +++..+.+ .+.+++..   ..           ..+..+..-...|.+.+|..+ -+|++. .. .|+.  +.. | ...
T Consensus       158 ~val~t~~-~i~il~~~---~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT-~~-~lkY--l~~-G-e~~  226 (443)
T PF04053_consen  158 LVALVTKD-SIYILKYN---LEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYTT-SN-HLKY--LVN-G-ETG  226 (443)
T ss_dssp             EEEEE-S--SEEEEEE----HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE--TT-EEEE--EET-T-EEE
T ss_pred             EEEEEeCC-eEEEEEec---chhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEEc-CC-eEEE--EEc-C-Ccc
Confidence            99988765 78888866   11           133333332566889999765 344443 33 6765  333 2 233


Q ss_pred             EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         270 KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      ++..-..++.=+.+.|..+.|+....++.|..+.+...
T Consensus       227 ~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~  264 (443)
T PF04053_consen  227 IIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDLS  264 (443)
T ss_dssp             EEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--HH
T ss_pred             eEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECHH
Confidence            33322345666677777778888888888888877653

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG3621|consensus

Probab=98.38  E-value=8.2e-06  Score=76.51  Aligned_cols=158  Identities=14%  Similarity=0.118  Sum_probs=105.7

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---ee
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN-VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN---IF  163 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~  163 (444)
                      ...++++..+++++.|+.-|.+++|+-..++....... ..+.+..+..++...++|.|+..|.|.++-++...+   ++
T Consensus        36 v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~  115 (726)
T KOG3621|consen   36 VKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDY  115 (726)
T ss_pred             EEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCccee
Confidence            34467788899999999999999999887776642222 344455667788888999999999999998877332   11


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-CCCccceEEEeCCCCCeeEEEEcc
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI-TTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      .-..+               .+++..|++++|++++..+++|...|+|.+-.+.. .......+.+......|..+.+. 
T Consensus       116 ~t~~d---------------~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-  179 (726)
T KOG3621|consen  116 VTPCD---------------KSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-  179 (726)
T ss_pred             ecccc---------------ccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-
Confidence            11111               22455799999999999999999999999998881 11122233344455667777664 


Q ss_pred             CCCEEEEEcCCCcEEEEEcCC
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      ++ +|++++.-. ..++++..
T Consensus       180 q~-~LLVStl~r-~~Lc~tE~  198 (726)
T KOG3621|consen  180 QS-YLLVSTLTR-CILCQTEA  198 (726)
T ss_pred             cc-eehHhhhhh-hheeecch
Confidence            33 333333322 23455543

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.38  E-value=0.00043  Score=63.67  Aligned_cols=251  Identities=10%  Similarity=0.076  Sum_probs=135.4

Q ss_pred             CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc--------
Q psy8152          14 STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF--------   85 (444)
Q Consensus        14 ~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--------   85 (444)
                      ..+.+.+|++.+++.     ..+..  ....+....|+ |+++.++.... +.|++++..++...+.- ..+        
T Consensus        21 ~~~~y~i~d~~~~~~-----~~l~~--~~~~~~~~~~s-P~g~~~~~v~~-~nly~~~~~~~~~~~lT-~dg~~~i~nG~   90 (353)
T PF00930_consen   21 FKGDYYIYDIETGEI-----TPLTP--PPPKLQDAKWS-PDGKYIAFVRD-NNLYLRDLATGQETQLT-TDGEPGIYNGV   90 (353)
T ss_dssp             EEEEEEEEETTTTEE-----EESS---EETTBSEEEE--SSSTEEEEEET-TEEEEESSTTSEEEESE-S--TTTEEESB
T ss_pred             cceeEEEEecCCCce-----EECcC--Cccccccceee-cCCCeeEEEec-CceEEEECCCCCeEEec-cccceeEEcCc
Confidence            456789999998773     22321  25778899999 79999988865 79999998766433221 111        


Q ss_pred             ----------ccccEEEEEeCCCeEEEEecC-Cc-----------------------------------EEEEEcCCCCc
Q psy8152          86 ----------GEGDIVGVSRYDECILTAVKS-GD-----------------------------------VKLWRYKTEPD  119 (444)
Q Consensus        86 ----------~~~~v~~~s~~~~~l~~~~~d-g~-----------------------------------i~iw~~~~~~~  119 (444)
                                ......-+||++++|+....| ..                                   +.|+++.+++.
T Consensus        91 ~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~  170 (353)
T PF00930_consen   91 PDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKT  170 (353)
T ss_dssp             --HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCC
T ss_pred             cceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcE
Confidence                      122345578888887765433 11                                   33344444443


Q ss_pred             cccc-----cccCCCeEEEEEeccCCEEEEee--CC---CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         120 QWTN-----FNVGPQLECMKHNKHSNIIATGG--KE---NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       120 ~~~~-----~~~~~~v~~~~~~~~~~~l~~~~--~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      ....     ..-...+..+.|.+++..|+..-  .+   -.+.++|..++...........                 .|
T Consensus       171 ~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~-----------------~W  233 (353)
T PF00930_consen  171 TELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSD-----------------GW  233 (353)
T ss_dssp             CEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESS-----------------SS
T ss_pred             EEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCC-----------------cc
Confidence            2111     11234467788888777333322  21   2355666665443322221111                 12


Q ss_pred             e---eEEEEe-cCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE-EEEccCCCEEE-EEcCC----CcEEE
Q psy8152         190 V---NGISFL-PNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC-ITTTNQSHYVI-VGSTT----GDMMA  258 (444)
Q Consensus       190 i---~~~~~~-~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~-~~~~d----g~i~i  258 (444)
                      |   ..+.|. +++ .+|.....+|.-+||-+.  ........+......|+. +.+++.++.|+ ++..+    ..|+.
T Consensus       234 v~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~--~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~  311 (353)
T PF00930_consen  234 VDVYDPPHFLGPDGNEFLWISERDGYRHLYLYD--LDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYR  311 (353)
T ss_dssp             SSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEE--TTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred             eeeecccccccCCCCEEEEEEEcCCCcEEEEEc--ccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence            2   245554 666 455555677765555554  112224455555666744 67788766554 45442    24555


Q ss_pred             EEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         259 VDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       259 wd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      .++.. +..+..+....+.-..+.|||++++++-.+
T Consensus       312 v~~~~-~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~  346 (353)
T PF00930_consen  312 VSLDS-GGEPKCLTCEDGDHYSASFSPDGKYYVDTY  346 (353)
T ss_dssp             EETTE-TTEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred             EEeCC-CCCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence            55552 345555554333326899999999877543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.31  E-value=0.0002  Score=65.07  Aligned_cols=147  Identities=18%  Similarity=0.171  Sum_probs=97.7

Q ss_pred             cccEEEecC---------C-CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC
Q psy8152           6 DYNIYIGSS---------T-GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK   75 (444)
Q Consensus         6 ~~~l~~g~~---------d-g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~   75 (444)
                      ..+|++|+.         . |.|.++.+.........+..+......++|++|+-.   +.+|+++.. +.|++|++...
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~---~~~lv~~~g-~~l~v~~l~~~  117 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF---NGRLVVAVG-NKLYVYDLDNS  117 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE---TTEEEEEET-TEEEEEEEETT
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh---CCEEEEeec-CEEEEEEccCc
Confidence            567777754         2 999999998851111223444333568999999976   344555554 89999999877


Q ss_pred             c-cccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCC-Cccccccc--cCCCeEEEEEeccCCEEEEeeCCCeE
Q psy8152          76 N-FNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE-PDQWTNFN--VGPQLECMKHNKHSNIIATGGKENDL  151 (444)
Q Consensus        76 ~-~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i  151 (444)
                      + ....-.. .....+.++...++++++|..-..|.++.+... ..+.....  ....++++.|-++++.++.+..+|.|
T Consensus       118 ~~l~~~~~~-~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl  196 (321)
T PF03178_consen  118 KTLLKKAFY-DSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNL  196 (321)
T ss_dssp             SSEEEEEEE--BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEE
T ss_pred             ccchhhhee-cceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeE
Confidence            7 4443332 335578888888889999999889998866542 21221222  34558888888666799999999999


Q ss_pred             EEEEcC
Q psy8152         152 KLWDLN  157 (444)
Q Consensus       152 ~vwd~~  157 (444)
                      .++...
T Consensus       197 ~~l~~~  202 (321)
T PF03178_consen  197 FVLRYN  202 (321)
T ss_dssp             EEEEE-
T ss_pred             EEEEEC
Confidence            999876

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.29  E-value=8.7e-05  Score=73.12  Aligned_cols=143  Identities=13%  Similarity=0.174  Sum_probs=99.4

Q ss_pred             cCCcEEEEE-EcCCeEEEEeCCCCccccceeeccccccEEEEEeCC-------CeEEEEecCCcEEEEEcCCCC--ccc-
Q psy8152          53 VEESELLIA-YSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYD-------ECILTAVKSGDVKLWRYKTEP--DQW-  121 (444)
Q Consensus        53 ~~~~~l~~~-~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~-------~~l~~~~~dg~i~iw~~~~~~--~~~-  121 (444)
                      .+.++|+.. .....|+-.|+..|+.+..+..+. ..+|..+.|+.       ...+.|-.+..+..||.+-..  ++. 
T Consensus       491 ~d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~-~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~  569 (794)
T PF08553_consen  491 QDRNMILLDPNNPNKLYKMDLERGKVVEEWKVHD-DIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS  569 (794)
T ss_pred             cccceEeecCCCCCceEEEecCCCcEEEEeecCC-CcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec
Confidence            344555543 345789999999999999988643 45588887753       335678888899999977432  232 


Q ss_pred             --cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         122 --TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       122 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                        ..........|++-+.+| +||+|+.+|.||+||--..+....+++.+.                  +|.+|..+.+|
T Consensus       570 ~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~------------------pI~~iDvt~DG  630 (794)
T PF08553_consen  570 QSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGD------------------PIIGIDVTADG  630 (794)
T ss_pred             cccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCC------------------CeeEEEecCCC
Confidence              112234567787777655 899999999999999433222233344444                  89999999999


Q ss_pred             CEEEEEeCCceEEEEEc
Q psy8152         200 DKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       200 ~~l~~~~~d~~i~i~d~  216 (444)
                      ++|++.+. ..|.|++.
T Consensus       631 kwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  631 KWILATCK-TYLLLIDT  646 (794)
T ss_pred             cEEEEeec-ceEEEEEE
Confidence            98876554 57777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.28  E-value=0.0016  Score=58.47  Aligned_cols=241  Identities=10%  Similarity=0.024  Sum_probs=113.9

Q ss_pred             EEEeeeccCCcEEEEEEc-C--CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152          46 LALNWGNVEESELLIAYS-G--QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT  122 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~-d--~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~  122 (444)
                      +.=+|. ++++.|+.++. +  ..+++.|+.+++..+.-...+....-..++++++.++-......|+-.|+.+.+....
T Consensus        39 ~~~~ft-~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~v  117 (386)
T PF14583_consen   39 YQNCFT-DDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVV  117 (386)
T ss_dssp             TS--B--TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEE
T ss_pred             cCCCcC-CCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEE
Confidence            334567 67876666554 4  5677778888887776543322233355678888877666667888899998876543


Q ss_pred             ccccCCCeEEEEEec--cCCEEEEeeC----------------------CCeEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152         123 NFNVGPQLECMKHNK--HSNIIATGGK----------------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       123 ~~~~~~~v~~~~~~~--~~~~l~~~~~----------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  178 (444)
                      +......+-...|..  ++..++-.-.                      ...|.-.|+.+|+....+. .          
T Consensus       118 y~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~----------  186 (386)
T PF14583_consen  118 YEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-D----------  186 (386)
T ss_dssp             EE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-E----------
T ss_pred             EECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-c----------
Confidence            434444454566643  4554432211                      1223344444444322222 1          


Q ss_pred             CCcccccCccceeEEEEecCC-CEEEEEeC---Cc-eEEEEEcCC-CCCccceEEEeCCCCCeeEEEEccCCCEEEE---
Q psy8152         179 PDEFDLRRPVWVNGISFLPNS-DKVAVCSK---QG-YVRVYDPKI-TTQRRPVLKVDIPDVALSCITTTNQSHYVIV---  249 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~---d~-~i~i~d~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~---  249 (444)
                              ..|+..+.|+|.. .+|+-|-+   +. .-|||-+++ +...+++..-. ....+..=-|.|+|..|.-   
T Consensus       187 --------~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~-~~e~~gHEfw~~DG~~i~y~~~  257 (386)
T PF14583_consen  187 --------TDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRM-EGESVGHEFWVPDGSTIWYDSY  257 (386)
T ss_dssp             --------SS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TTEEEEEEEE-TTSS-EEEEEE
T ss_pred             --------CccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCC-CCcccccccccCCCCEEEEEee
Confidence                    2378999999977 55555433   22 135565551 22223332211 1233445568999987664   


Q ss_pred             --EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC----------------cEEEEEcCCCceE
Q psy8152         250 --GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR----------------HFRVHDFHSKKLL  310 (444)
Q Consensus       250 --~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg----------------~i~vw~~~~~~~~  310 (444)
                        ++.+..|.-+++.+ ++......  ......+..+++|++++.=+.|.                -|+++++..+...
T Consensus       258 ~~~~~~~~i~~~d~~t-~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~  333 (386)
T PF14583_consen  258 TPGGQDFWIAGYDPDT-GERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFR  333 (386)
T ss_dssp             ETTT--EEEEEE-TTT---EEEEEE--E-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEE
T ss_pred             cCCCCceEEEeeCCCC-CCceEEEe--CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCcee
Confidence              23344577778887 54432222  12344566678998887655542                4566777766554

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.26  E-value=0.0028  Score=58.79  Aligned_cols=245  Identities=14%  Similarity=0.112  Sum_probs=155.9

Q ss_pred             ceEEEeeeccCCcEEEEEE-cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCccc
Q psy8152          44 SVLALNWGNVEESELLIAY-SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ....+... +.+..++... ....+...+..................-.++++.+.. +++...++.|.+.|..+.+...
T Consensus        32 ~~~~v~~~-~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~  110 (381)
T COG3391          32 GPGGVAVN-PDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLG  110 (381)
T ss_pred             CCceeEEc-CccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceee
Confidence            45566676 5664444433 2234555444422222211111112233456677764 5555556899999977766664


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                       ..........++++|+++.++.+..   ++++.+.|..+++.+........                  + ..+++.|+
T Consensus       111 -~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~------------------P-~~~a~~p~  170 (381)
T COG3391         111 -SIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNT------------------P-TGVAVDPD  170 (381)
T ss_pred             -EeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCC------------------c-ceEEECCC
Confidence             3333446778999998877776665   68899999888888777443333                  3 78999999


Q ss_pred             CCEEEEE-eCCceEEEEEcCCCCCccceE-----EEeCCCCCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCccee
Q psy8152         199 SDKVAVC-SKQGYVRVYDPKITTQRRPVL-----KVDIPDVALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCY  269 (444)
Q Consensus       199 ~~~l~~~-~~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~  269 (444)
                      ++.++++ ..++.|.++|..   ......     .+... .....+.++|+|.++++....   +.+...|..+ +....
T Consensus       171 g~~vyv~~~~~~~v~vi~~~---~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~-~~v~~  245 (381)
T COG3391         171 GNKVYVTNSDDNTVSVIDTS---GNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT-GNVTA  245 (381)
T ss_pred             CCeEEEEecCCCeEEEEeCC---CcceeccccccccccC-CCCceEEECCCCCEEEEEeccCCCceEEEEeCCC-ceEEE
Confidence            9855554 478999999977   222221     12222 234678999999977664433   5899999888 66655


Q ss_pred             E-eccccCceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCceEEEee
Q psy8152         270 K-YKGFAGCVKDIACPLNENLILSVS-LDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       270 ~-~~~h~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~  314 (444)
                      . +..-......+.++|+|.++.+.. ..+.+.+-|..+........
T Consensus       246 ~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~  292 (381)
T COG3391         246 TDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP  292 (381)
T ss_pred             eccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec
Confidence            4 222111456789999999888874 44889999999888777654

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.23  E-value=0.003  Score=55.97  Aligned_cols=242  Identities=12%  Similarity=0.070  Sum_probs=133.8

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee-
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD-   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-   82 (444)
                      ..++.|++|+.+| |++++...... .   ..+   .+...|..+... ++-+.|++-+ |+.++++++..-....... 
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~-~---~~i---~~~~~I~ql~vl-~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~   74 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSK-P---TRI---LKLSSITQLSVL-PELNLLLVLS-DGQLYVYDLDSLEPVSTSAP   74 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCcc-c---eeE---eecceEEEEEEe-cccCEEEEEc-CCccEEEEchhhcccccccc
Confidence            4568899999998 89999832221 1   111   234459999999 5566655544 4999999987544333110 


Q ss_pred             -----------eccccccEEEEE----eCCCeEEEEecCCcEEEEEcCCCC----ccccccccCCCeEEEEEeccCCEEE
Q psy8152          83 -----------VSFGEGDIVGVS----RYDECILTAVKSGDVKLWRYKTEP----DQWTNFNVGPQLECMKHNKHSNIIA  143 (444)
Q Consensus        83 -----------~~~~~~~v~~~s----~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~  143 (444)
                                 .......+..++    ..+...+.......|.+|......    ...........+.+++|.  ++.|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~  152 (275)
T PF00780_consen   75 LAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKIC  152 (275)
T ss_pred             ccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEE
Confidence                       011233344444    234444444455599998876531    122344467889999998  56777


Q ss_pred             EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc
Q psy8152         144 TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR  223 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  223 (444)
                      .|..+ ...+.|+.++.....+......   ..+.   .......++..+.. +++.+|++.  +..-.+.+..  +...
T Consensus       153 v~~~~-~f~~idl~~~~~~~l~~~~~~~---~~~~---~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~~--G~~~  220 (275)
T PF00780_consen  153 VGTSK-GFYLIDLNTGSPSELLDPSDSS---SSFK---SRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNKN--GEPS  220 (275)
T ss_pred             EEeCC-ceEEEecCCCCceEEeCccCCc---chhh---hcccCCCceEEEEe-CCceEEEEe--cceEEEEcCC--CCcC
Confidence            77754 5888999876543332211110   0000   00000112333333 344555542  3444455555  1111


Q ss_pred             ceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         224 PVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       224 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      ....+.-. ..+..+++.  ..||++.+. +.|.||++.+ +++++++...
T Consensus       221 r~~~i~W~-~~p~~~~~~--~pyli~~~~-~~iEV~~~~~-~~lvQ~i~~~  266 (275)
T PF00780_consen  221 RKSTIQWS-SAPQSVAYS--SPYLIAFSS-NSIEVRSLET-GELVQTIPLP  266 (275)
T ss_pred             cccEEEcC-CchhEEEEE--CCEEEEECC-CEEEEEECcC-CcEEEEEECC
Confidence            11223322 345666664  347777665 4599999999 9998888743

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.22  E-value=0.00069  Score=62.49  Aligned_cols=249  Identities=13%  Similarity=0.075  Sum_probs=127.5

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc-ceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCC---C--
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT-NTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKT---E--  117 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~---~--  117 (444)
                      .|++|.|. +....|++|...|.|.||.....+... .-.-..-...-..++.         .++.-.+-|+..   .  
T Consensus         3 ~v~~vs~a-~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~di~~r~~~~~   72 (395)
T PF08596_consen    3 SVTHVSFA-PETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSL---------NNSPGKLTDISDRAPPSL   72 (395)
T ss_dssp             -EEEEEEE-TTTTEEEEEETTS-EEEEEEEE------------------S--G---------GGSS-SEEE-GGG--TT-
T ss_pred             eEEEEEec-CCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccc---------cCCCcceEEehhhCCccc
Confidence            58899999 788999999999999999876543332 0000000000000100         111112222221   1  


Q ss_pred             ----CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         118 ----PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       118 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                          .+...+....++|++++.+ +=.++|.|..+|.+.|.|++....++......+          .........|+++
T Consensus        73 ~~gf~P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~----------~~~~~~~~~vt~i  141 (395)
T PF08596_consen   73 KEGFLPLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRES----------FLSKSSSSYVTSI  141 (395)
T ss_dssp             SEEEEEEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG------------T-SS----EEEE
T ss_pred             ccccCchhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeecccccc----------ccccccccCeeEE
Confidence                1111222347899999997 556999999999999999998877766332220          0111123357788


Q ss_pred             EEec-----CC---CEEEEEeCCceEEEEEcCCCCCccc----eEEEeCCCCCeeEEE-EccC-----------------
Q psy8152         194 SFLP-----NS---DKVAVCSKQGYVRVYDPKITTQRRP----VLKVDIPDVALSCIT-TTNQ-----------------  243 (444)
Q Consensus       194 ~~~~-----~~---~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~i~~~~-~~~~-----------------  243 (444)
                      .|..     ++   -.|++|+..|.+.+|.+.-......    ......+..+|..|. |+.+                 
T Consensus       142 eF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~  221 (395)
T PF08596_consen  142 EFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSK  221 (395)
T ss_dssp             EEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGG
T ss_pred             EEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhcccc
Confidence            8762     22   4688999999999998761011111    111223455555544 3211                 


Q ss_pred             ----CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec-----CCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         244 ----SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP-----LNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       244 ----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s-----~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                          ..+++++ ....|+++...+ .+..++.....-....+.+-     ..+..|++-..+|.|++|.+..-+.+....
T Consensus       222 g~~i~g~vVvv-Se~~irv~~~~~-~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~  299 (395)
T PF08596_consen  222 GISIPGYVVVV-SESDIRVFKPPK-SKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVS  299 (395)
T ss_dssp             T----EEEEEE--SSEEEEE-TT----EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE
T ss_pred             CCCcCcEEEEE-cccceEEEeCCC-CcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhccc
Confidence                1144444 466799999988 76666554221222233442     245688888999999999999988877665


Q ss_pred             c
Q psy8152         315 M  315 (444)
Q Consensus       315 ~  315 (444)
                      .
T Consensus       300 l  300 (395)
T PF08596_consen  300 L  300 (395)
T ss_dssp             -
T ss_pred             C
Confidence            4

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.20  E-value=0.0037  Score=57.57  Aligned_cols=270  Identities=13%  Similarity=0.060  Sum_probs=138.0

Q ss_pred             cCCcEEEEE---------EcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc
Q psy8152          53 VEESELLIA---------YSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN  123 (444)
Q Consensus        53 ~~~~~l~~~---------~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  123 (444)
                      |++++++..         +..+.+.|||+.+++....... ........++|+|+.++... ++.|.++++.++...+..
T Consensus         2 ~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT   79 (353)
T PF00930_consen    2 PDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLT   79 (353)
T ss_dssp             TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESE
T ss_pred             CCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEec
Confidence            466666653         2246889999998777665542 23455677899999988774 578999988776544311


Q ss_pred             ccc-----------------CCCeEEEEEeccCCEEEEeeCC-CeEEEEEc---CCc-e---eeeeee--cccc-----e
Q psy8152         124 FNV-----------------GPQLECMKHNKHSNIIATGGKE-NDLKLWDL---NTT-K---NIFSAK--NVSH-----R  171 (444)
Q Consensus       124 ~~~-----------------~~~v~~~~~~~~~~~l~~~~~d-~~i~vwd~---~~~-~---~~~~~~--~~~~-----~  171 (444)
                      ..-                 -..-..+.|+|++++||....| ..|..+.+   ... .   .+..++  ..+.     .
T Consensus        80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~  159 (353)
T PF00930_consen   80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVS  159 (353)
T ss_dssp             S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEE
T ss_pred             cccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceE
Confidence            111                 1123578899999999876643 33333322   221 1   122222  1111     1


Q ss_pred             eeEeeeCCCcc---c-----ccCccceeEEEEecCCCEEEEE--eCC---ceEEEEEcCCCCCccceEEEeCCCCCe---
Q psy8152         172 VLVYSVKPDEF---D-----LRRPVWVNGISFLPNSDKVAVC--SKQ---GYVRVYDPKITTQRRPVLKVDIPDVAL---  235 (444)
Q Consensus       172 ~~~~~~~~~~~---~-----~~~~~~i~~~~~~~~~~~l~~~--~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i---  235 (444)
                      +.++.+.....   .     ......+..+.|.+++..|+..  ..+   ..+.++|.. ++..+.+..-. ....|   
T Consensus       160 l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~-tg~~~~~~~e~-~~~Wv~~~  237 (353)
T PF00930_consen  160 LFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDAS-TGETRVVLEET-SDGWVDVY  237 (353)
T ss_dssp             EEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEEC-TTTCEEEEEEE-SSSSSSSS
T ss_pred             EEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECC-CCceeEEEEec-CCcceeee
Confidence            11122211111   0     1123348899999998744433  222   246667776 22333333222 22222   


Q ss_pred             eEEEEc-cCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEE-EEECC----CcEEEEEcC-C
Q psy8152         236 SCITTT-NQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLIL-SVSLD----RHFRVHDFH-S  306 (444)
Q Consensus       236 ~~~~~~-~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~-s~~~d----g~i~vw~~~-~  306 (444)
                      ....|. +++ .+|.....+|.-+||-+...+.....+....-.|+. +.|+++++.|+ ++..+    ..|+.-++. .
T Consensus       238 ~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~  317 (353)
T PF00930_consen  238 DPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG  317 (353)
T ss_dssp             SEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET
T ss_pred             cccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC
Confidence            355554 554 455556677765544443323445566544556755 57888876554 44432    245555666 3


Q ss_pred             CceEEEeecCCcee-EEEEcCC
Q psy8152         307 KKLLRKDYMQSRLT-SILVRSD  327 (444)
Q Consensus       307 ~~~~~~~~~~~~i~-~~~~~~~  327 (444)
                      +.+ ..+....... .+.|+++
T Consensus       318 ~~~-~~LT~~~~~~~~~~~Spd  338 (353)
T PF00930_consen  318 GEP-KCLTCEDGDHYSASFSPD  338 (353)
T ss_dssp             TEE-EESSTTSSTTEEEEE-TT
T ss_pred             CCe-EeccCCCCCceEEEECCC
Confidence            343 4444333333 6777655

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.19  E-value=0.0032  Score=55.83  Aligned_cols=225  Identities=12%  Similarity=0.142  Sum_probs=124.5

Q ss_pred             CCcEEEEEEcCCeEEEEeCC-CCccccceeeccccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCCcccc--------
Q psy8152          54 EESELLIAYSGQKIKIYDTD-FKNFNTNTDVSFGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEPDQWT--------  122 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~-~~~~~~~~~~~~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------  122 (444)
                      .++.|+.|+.+| ++++++. .........    ...|..+.  +.-+.|++- .|+.++++++..-.....        
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~----~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~~   79 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILK----LSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFPK   79 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEee----cceEEEEEEecccCEEEEE-cCCccEEEEchhhccccccccccccc
Confidence            478999998888 8999983 233333222    23365553  444444443 349999999876544321        


Q ss_pred             ------ccccCCCeEEEE-E-eccCCEEEEeeCCCeEEEEEcCCc-----eeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         123 ------NFNVGPQLECMK-H-NKHSNIIATGGKENDLKLWDLNTT-----KNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       123 ------~~~~~~~v~~~~-~-~~~~~~l~~~~~d~~i~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                            .......+..++ - .+.+...+.......|.+|.....     +....+....                   .
T Consensus        80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~-------------------~  140 (275)
T PF00780_consen   80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPD-------------------P  140 (275)
T ss_pred             cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCC-------------------C
Confidence                  112233344444 1 123333333444558888888653     2333333332                   5


Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC----------CCCCeeEEEEccCCCEEEEEcCCCcEEEE
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI----------PDVALSCITTTNQSHYVIVGSTTGDMMAV  259 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  259 (444)
                      +.+++|.  ++.|+.|..+ ...+.|+. +.....+.....          ...++..+.. +++.+|++-  +..-.+.
T Consensus       141 ~~~i~~~--~~~i~v~~~~-~f~~idl~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv  213 (275)
T PF00780_consen  141 PSSIAFL--GNKICVGTSK-GFYLIDLN-TGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFV  213 (275)
T ss_pred             cEEEEEe--CCEEEEEeCC-ceEEEecC-CCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEE
Confidence            8999998  4677777655 47788888 223333322111          1123333333 345566643  3333344


Q ss_pred             EcCCCCccee--EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152         260 DLRGKGKPCY--KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ  316 (444)
Q Consensus       260 d~~~~~~~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~  316 (444)
                      +..  |++.+  .+.- ...+.++++.  .++|++.+. +.|.||++.++++++.+..+
T Consensus       214 ~~~--G~~~r~~~i~W-~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~  266 (275)
T PF00780_consen  214 NKN--GEPSRKSTIQW-SSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIPLP  266 (275)
T ss_pred             cCC--CCcCcccEEEc-CCchhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEECC
Confidence            543  44443  3332 2345566663  457777666 55999999999998887633

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1008|consensus

Probab=98.17  E-value=5.9e-07  Score=82.95  Aligned_cols=199  Identities=13%  Similarity=0.118  Sum_probs=126.1

Q ss_pred             CCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceee--eeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CE
Q psy8152         127 GPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DK  201 (444)
Q Consensus       127 ~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~  201 (444)
                      ...+.|+++..  +..+++.|..+|.|.+-.++...-.  ...+++..                  ++++++|++-. ++
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar------------------~Ct~lAwneLDtn~  117 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYAR------------------PCTSLAWNELDTNH  117 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccc------------------cccccccccccHHH
Confidence            34567777765  3457889999999999888763221  11222223                  68999998854 66


Q ss_pred             EEEEe----CCceEEEEEcCCCCCccceE--EEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         202 VAVCS----KQGYVRVYDPKITTQRRPVL--KVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       202 l~~~~----~d~~i~i~d~~~~~~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      ||+|-    .|..+.|||+. +.-..|..  .|.. ......+++|..+.+++++|.....+.++|++........+  .
T Consensus       118 LAagldkhrnds~~~Iwdi~-s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--n  194 (783)
T KOG1008|consen  118 LAAGLDKHRNDSSLKIWDIN-SLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--N  194 (783)
T ss_pred             HHhhhhhhcccCCccceecc-cccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--h
Confidence            77663    36689999998 22112221  1222 33345688999889999999999999999998412222222  3


Q ss_pred             cCceeEEEecC-CCCEEEEEECCCcEEEEEc-CC-CceEEEeec-----CCceeEEEEcCCCcccccchhhhhccccc-c
Q psy8152         275 AGCVKDIACPL-NENLILSVSLDRHFRVHDF-HS-KKLLRKDYM-----QSRLTSILVRSDFSLENETKKEEQEHSEE-K  345 (444)
Q Consensus       275 ~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~-~~-~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~s~~-~  345 (444)
                      +..+..+...| .+.|+++.. ||.|.+||. .+ ..++..+.+     ..++..++|+|.       ..+ .+++.. +
T Consensus       195 Tk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPt-------rtg-lla~l~Rd  265 (783)
T KOG1008|consen  195 TKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPT-------RTG-LLAVLSRD  265 (783)
T ss_pred             hhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccC-------Ccc-hhhhhccC
Confidence            44567778888 567777655 999999993 32 223333222     234788888875       222 344333 4


Q ss_pred             CCCccccCCC
Q psy8152         346 GDSDEKYDPE  355 (444)
Q Consensus       346 d~~i~~W~~~  355 (444)
                      .++|+++++.
T Consensus       266 S~tIrlydi~  275 (783)
T KOG1008|consen  266 SITIRLYDIC  275 (783)
T ss_pred             cceEEEeccc
Confidence            5778888876

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.17  E-value=0.0014  Score=56.08  Aligned_cols=204  Identities=9%  Similarity=0.062  Sum_probs=106.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +-...+..|+|.|.++.++++....+.|..++. .|+.+..+.+.+. ...-..+.-++.++++.-.++.+.++.+....
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~   97 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDT   97 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccc
Confidence            345569999999433455666777788888887 4888888776542 22223333445555555568899999884322


Q ss_pred             c-cc----------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---ceeeeeeecccceeeEeeeCCCcccc
Q psy8152         119 D-QW----------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---TKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       119 ~-~~----------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      . +.          ....+...+-.++|.|.++.|+.+-......+|.+..   ...+........        +. ...
T Consensus        98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~--------~~-~~~  168 (248)
T PF06977_consen   98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDL--------DD-DKL  168 (248)
T ss_dssp             TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHH--------H--HT-
T ss_pred             cccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccc--------cc-ccc
Confidence            1 10          1112445689999999877777777766667776654   111111110000        00 000


Q ss_pred             cCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---------CCeeEEEEccCCCEEEEEcCCC
Q psy8152         185 RRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---------VALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                       ....+.+++++|.. .+++.......|..+|..    ++++..+.-..         ...-.|+|.++|++.+++ .-+
T Consensus       169 -~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~----G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpN  242 (248)
T PF06977_consen  169 -FVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ----GRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPN  242 (248)
T ss_dssp             --SS---EEEEETTTTEEEEEETTTTEEEEE-TT------EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTT
T ss_pred             -eeccccceEEcCCCCeEEEEECCCCeEEEECCC----CCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCc
Confidence             01137889999876 666777888899999965    44444333221         235789999998655544 555


Q ss_pred             cEEEE
Q psy8152         255 DMMAV  259 (444)
Q Consensus       255 ~i~iw  259 (444)
                      ..++|
T Consensus       243 lfy~f  247 (248)
T PF06977_consen  243 LFYRF  247 (248)
T ss_dssp             EEEEE
T ss_pred             eEEEe
Confidence            55554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.17  E-value=0.00045  Score=64.58  Aligned_cols=211  Identities=9%  Similarity=0.101  Sum_probs=110.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++..+++.+.+|...|+.....+.           ...+.-...+|. + .+.+|+-...++|.|+.--+......+..+
T Consensus        42 pngr~v~V~g~geY~iyt~~~~r~-----------k~~G~g~~~vw~-~-~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~  108 (443)
T PF04053_consen   42 PNGRFVLVCGDGEYEIYTALAWRN-----------KAFGSGLSFVWS-S-RNRYAVLESSSTIKIYKNFKNEVVKSIKLP  108 (443)
T ss_dssp             TTSSEEEEEETTEEEEEETTTTEE-----------EEEEE-SEEEE--T-SSEEEEE-TTS-EEEEETTEE-TT-----S
T ss_pred             CCCCEEEEEcCCEEEEEEccCCcc-----------cccCceeEEEEe-c-CccEEEEECCCeEEEEEcCccccceEEcCC
Confidence            344444447788888888333221           113555778899 5 555777666889999754344444455432


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-----
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-----  159 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-----  159 (444)
                         ..+..+.+ |.+|+..+.+ .|.+||+.+++.+..+ ... +|..+.|++++.+++..+.+ .+.+++....     
T Consensus       109 ---~~~~~If~-G~LL~~~~~~-~i~~yDw~~~~~i~~i-~v~-~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~  180 (443)
T PF04053_consen  109 ---FSVEKIFG-GNLLGVKSSD-FICFYDWETGKLIRRI-DVS-AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAI  180 (443)
T ss_dssp             ---S-EEEEE--SSSEEEEETT-EEEEE-TTT--EEEEE-SS--E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHB
T ss_pred             ---cccceEEc-CcEEEEECCC-CEEEEEhhHcceeeEE-ecC-CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccc
Confidence               23444444 7777776555 8999999999888633 333 48999999999999998865 6777775543     


Q ss_pred             ------eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         160 ------KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       160 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                            ..+..+.....                  .|.+.+|..+  .++-.+.. .|+.  +. .+....+.++   ..
T Consensus       181 ~~~g~e~~f~~~~E~~~------------------~IkSg~W~~d--~fiYtT~~-~lkY--l~-~Ge~~~i~~l---d~  233 (443)
T PF04053_consen  181 PEEGVEDAFELIHEISE------------------RIKSGCWVED--CFIYTTSN-HLKY--LV-NGETGIIAHL---DK  233 (443)
T ss_dssp             TTTB-GGGEEEEEEE-S--------------------SEEEEETT--EEEEE-TT-EEEE--EE-TTEEEEEEE----SS
T ss_pred             cccCchhceEEEEEecc------------------eeEEEEEEcC--EEEEEcCC-eEEE--EE-cCCcceEEEc---CC
Confidence                  01222221112                  5888899765  44444444 6666  33 1233333333   34


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      ++.-+.+.|..+.|+....++.|..+.+..
T Consensus       234 ~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~  263 (443)
T PF04053_consen  234 PLYLLGYLPKENRLYLIDRDGNVISYELDL  263 (443)
T ss_dssp             --EEEEEETTTTEEEEE-TT--EEEEE--H
T ss_pred             ceEEEEEEccCCEEEEEECCCCEEEEEECH
Confidence            566677777767888888888888887653

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.15  E-value=0.0023  Score=59.77  Aligned_cols=212  Identities=13%  Similarity=0.135  Sum_probs=113.5

Q ss_pred             eEEEEeCCCCccccceeeccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccc---cCCC-----eEEEEEe
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFN---VGPQ-----LECMKHN  136 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~-----v~~~~~~  136 (444)
                      .|+||+.. |+.+..+....  ..+.++.+. ...|++...+|.+++|++....  ....+   ....     +....+.
T Consensus        62 ~I~iys~s-G~ll~~i~w~~--~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~--~fsl~~~i~~~~v~e~~i~~~~~~  136 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDS--GRIVGMGWTDDEELVVVQSDGTVRVYDLFGEF--QFSLGEEIEEEKVLECRIFAIWFY  136 (410)
T ss_pred             EEEEECCC-CCEeEEEEECC--CCEEEEEECCCCeEEEEEcCCEEEEEeCCCce--eechhhhccccCcccccccccccC
Confidence            59999875 77777777654  778887663 4567778899999999986333  11111   1112     2222333


Q ss_pred             ccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeE-EEEecCCCEEEEEeCCceEEEE
Q psy8152         137 KHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG-ISFLPNSDKVAVCSKQGYVRVY  214 (444)
Q Consensus       137 ~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d~~i~i~  214 (444)
                      .+|-.+++  .++.+.+..-.... ....+.......  ...++      .. .... ..++.+....+....++.+.+.
T Consensus       137 ~~GivvLt--~~~~~~~v~n~~~~~~~~~~~~~p~~~--~~~~~------~~-~~~~i~~l~~~~~~~i~~~~g~~i~~i  205 (410)
T PF04841_consen  137 KNGIVVLT--GNNRFYVVNNIDEPVKLRRLPEIPGLW--TKFHW------WP-SWTVIPLLSSDRVVEILLANGETIYII  205 (410)
T ss_pred             CCCEEEEC--CCCeEEEEeCccccchhhccccCCCcc--ccccc------cc-ccccceEeecCcceEEEEecCCEEEEE
Confidence            34533333  33444433221111 111111000000  00000      00 0111 2344455555555556667755


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSV  293 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~  293 (444)
                      +-.   ....   +. ..+++..|++||++++||.-..+|.+.|....- .+.+..+.-. ......+.|+-+...++.-
T Consensus       206 ~~~---~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf-~~~~~e~~~~~~~~p~~~~WCG~dav~l~~  277 (410)
T PF04841_consen  206 DEN---SFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDF-SEKLCEFDTDSKSPPKQMAWCGNDAVVLSW  277 (410)
T ss_pred             Ecc---cccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcc-cceeEEeecCcCCCCcEEEEECCCcEEEEe
Confidence            544   1111   22 345799999999999999999999999998766 6666666533 3466788887654433332


Q ss_pred             ECCCcEEEEE
Q psy8152         294 SLDRHFRVHD  303 (444)
Q Consensus       294 ~~dg~i~vw~  303 (444)
                        ...|.+..
T Consensus       278 --~~~l~lvg  285 (410)
T PF04841_consen  278 --EDELLLVG  285 (410)
T ss_pred             --CCEEEEEC
Confidence              33455544

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.15  E-value=0.0028  Score=56.98  Aligned_cols=269  Identities=12%  Similarity=0.096  Sum_probs=126.7

Q ss_pred             cccEEEecCCCc--EEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           6 DYNIYIGSSTGA--FKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         6 ~~~l~~g~~dg~--i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ...|+++..+|.  +++.|+.+++  +.++....    ........++ ++.+.++-......|+-.|+.+.+....+..
T Consensus        48 ~kllF~s~~dg~~nly~lDL~t~~--i~QLTdg~----g~~~~g~~~s-~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~  120 (386)
T PF14583_consen   48 RKLLFASDFDGNRNLYLLDLATGE--ITQLTDGP----GDNTFGGFLS-PDDRALYYVKNGRSLRRVDLDTLEERVVYEV  120 (386)
T ss_dssp             -EEEEEE-TTSS-EEEEEETTT-E--EEE---SS-----B-TTT-EE--TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred             CEEEEEeccCCCcceEEEEcccCE--EEECccCC----CCCccceEEe-cCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence            356666665654  5555666666  33333221    1223345666 5677776655557889999999887777765


Q ss_pred             ccccccEEEE--EeCCCeEEEEec----------------------CCcEEEEEcCCCCccccccccCCCeEEEEEec-c
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVK----------------------SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-H  138 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~----------------------dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~  138 (444)
                      +..-...-.+  ..++.+++-.-.                      .+.|.-.++.+++.. .+..-...+..+.|+| +
T Consensus       121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~-~v~~~~~wlgH~~fsP~d  199 (386)
T PF14583_consen  121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERK-VVFEDTDWLGHVQFSPTD  199 (386)
T ss_dssp             -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EE-EEEEESS-EEEEEEETTE
T ss_pred             CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCcee-EEEecCccccCcccCCCC
Confidence            5433222222  234444332211                      123555677777755 4556677788999999 7


Q ss_pred             CCEEEEeeC---CCe-EEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-----eCC
Q psy8152         139 SNIIATGGK---END-LKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-----SKQ  208 (444)
Q Consensus       139 ~~~l~~~~~---d~~-i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-----~~d  208 (444)
                      ..+|+.|-.   +.. -|||-+++ +.....+..+..                ...+..=-|.|+|..|.--     +.+
T Consensus       200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~----------------~e~~gHEfw~~DG~~i~y~~~~~~~~~  263 (386)
T PF14583_consen  200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRME----------------GESVGHEFWVPDGSTIWYDSYTPGGQD  263 (386)
T ss_dssp             EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---T----------------TEEEEEEEE-TTSS-EEEEEEETTT--
T ss_pred             CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCC----------------CcccccccccCCCCEEEEEeecCCCCc
Confidence            777776543   221 36676655 333333322221                1246666788998655432     234


Q ss_pred             ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC----------------CcEEEEEcCCCCcceeE--
Q psy8152         209 GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT----------------GDMMAVDLRGKGKPCYK--  270 (444)
Q Consensus       209 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~--  270 (444)
                      ..|.-+++. +.....+....    ....+--+++|++++-=+.|                -.|+++++.. +.....  
T Consensus       264 ~~i~~~d~~-t~~~~~~~~~p----~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~-~~~~~l~~  337 (386)
T PF14583_consen  264 FWIAGYDPD-TGERRRLMEMP----WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEA-GRFRKLAR  337 (386)
T ss_dssp             EEEEEE-TT-T--EEEEEEE-----SEEEEEE-TTSSEEEEEE-------------------EEEEEETTT-TEEEEEEE
T ss_pred             eEEEeeCCC-CCCceEEEeCC----ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEecccc-Cceeeeee
Confidence            567777777 22222232222    23455567888887652222                1466788776 443211  


Q ss_pred             -------eccccC-ceeEEEecCCCCEEE-EEECCCcEEEEEc
Q psy8152         271 -------YKGFAG-CVKDIACPLNENLIL-SVSLDRHFRVHDF  304 (444)
Q Consensus       271 -------~~~h~~-~i~~~~~s~~~~~l~-s~~~dg~i~vw~~  304 (444)
                             +.++.. .=....|+||+++|+ ++...|...||-+
T Consensus       338 h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v  380 (386)
T PF14583_consen  338 HDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV  380 (386)
T ss_dssp             -------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred             ccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence                   111111 123568999998554 5556777766643

>PHA02713 hypothetical protein; Provisional

Probab=98.14  E-value=0.00051  Score=66.95  Aligned_cols=221  Identities=10%  Similarity=0.011  Sum_probs=111.5

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC------CeEEEEeCCCCccccceeeccccccE
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG------QKIKIYDTDFKNFNTNTDVSFGEGDI   90 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~v   90 (444)
                      .+..|+..+++     +..+..+.....-.+++..  ++..++.|+.+      ..+..||..+......-..+......
T Consensus       273 ~v~~yd~~~~~-----W~~l~~mp~~r~~~~~a~l--~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~  345 (557)
T PHA02713        273 CILVYNINTME-----YSVISTIPNHIINYASAIV--DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF  345 (557)
T ss_pred             CEEEEeCCCCe-----EEECCCCCccccceEEEEE--CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce
Confidence            46677777665     2222222111111233333  46666777753      35778888776543322211112222


Q ss_pred             EEEEeCCCeEEEEecCC-----cEEEEEcCCCCccccccccCCCeE--EEEEeccCCEEEEeeCCC--------------
Q psy8152          91 VGVSRYDECILTAVKSG-----DVKLWRYKTEPDQWTNFNVGPQLE--CMKHNKHSNIIATGGKEN--------------  149 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~d~--------------  149 (444)
                      .....++++.+.|+.++     .+..||..+.+... ......+..  +++ .-++.+.+.|+.++              
T Consensus       346 ~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~-~~~mp~~r~~~~~~-~~~g~IYviGG~~~~~~~~~~~~~~~~~  423 (557)
T PHA02713        346 SLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKM-LPDMPIALSSYGMC-VLDQYIYIIGGRTEHIDYTSVHHMNSID  423 (557)
T ss_pred             eEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEE-CCCCCcccccccEE-EECCEEEEEeCCCccccccccccccccc
Confidence            33355778888888754     47889987664332 111111111  111 12677778887653              


Q ss_pred             ---------eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC------ceEEEE
Q psy8152         150 ---------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ------GYVRVY  214 (444)
Q Consensus       150 ---------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~  214 (444)
                               .+..||..+.+-...-.....                . .-.+++ .-++++.+.|+.+      ..+..|
T Consensus       424 ~~~~~~~~~~ve~YDP~td~W~~v~~m~~~----------------r-~~~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Y  485 (557)
T PHA02713        424 MEEDTHSSNKVIRYDTVNNIWETLPNFWTG----------------T-IRPGVV-SHKDDIYVVCDIKDEKNVKTCIFRY  485 (557)
T ss_pred             ccccccccceEEEECCCCCeEeecCCCCcc----------------c-ccCcEE-EECCEEEEEeCCCCCCccceeEEEe
Confidence                     344555554332111000000                0 011222 2245677777654      246789


Q ss_pred             EcCCC-CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--cEEEEEcCCCCcce
Q psy8152         215 DPKIT-TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--DMMAVDLRGKGKPC  268 (444)
Q Consensus       215 d~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~  268 (444)
                      |.. . .....+..+.........+++  ++++.++|+.++  .+..||+.+ .+-.
T Consensus       486 dp~-~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~-~~W~  538 (557)
T PHA02713        486 NTN-TYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYT-YEWN  538 (557)
T ss_pred             cCC-CCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccc-cccc
Confidence            988 3 344444444443333333444  678888898888  677888776 4433

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.11  E-value=0.0012  Score=61.58  Aligned_cols=197  Identities=11%  Similarity=0.004  Sum_probs=102.5

Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      .|+||+... +.+..+.-..+.|.++.|+.+. .|++-..+|.+++||+.... .+.+...-.   ...+        ..
T Consensus        62 ~I~iys~sG-~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~---~~~v--------~e  127 (410)
T PF04841_consen   62 SIQIYSSSG-KLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEF-QFSLGEEIE---EEKV--------LE  127 (410)
T ss_pred             EEEEECCCC-CEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCCce-eechhhhcc---ccCc--------cc
Confidence            377777553 3333222223789999998754 55566789999999987433 222111000   0000        00


Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE---EeC-------CCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK---VDI-------PDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                      ..+....+..+|  ++.-..++.+.+..-.  ........   +..       +........++.+....+....++.+.
T Consensus       128 ~~i~~~~~~~~G--ivvLt~~~~~~~v~n~--~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~  203 (410)
T PF04841_consen  128 CRIFAIWFYKNG--IVVLTGNNRFYVVNNI--DEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIY  203 (410)
T ss_pred             ccccccccCCCC--EEEECCCCeEEEEeCc--cccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEE
Confidence            012222333344  2223344444444322  01101111   111       000000122444444444444555566


Q ss_pred             EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--CceeEEEEcCC
Q psy8152         258 AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--SRLTSILVRSD  327 (444)
Q Consensus       258 iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--~~i~~~~~~~~  327 (444)
                      +.+-.. .+.   +. ..+++..|++||++++||.-..+|.+.|....-.+.+..+...  .+...++|+.+
T Consensus       204 ~i~~~~-~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~  270 (410)
T PF04841_consen  204 IIDENS-FKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN  270 (410)
T ss_pred             EEEccc-ccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence            444333 211   22 2468999999999999999999999999987666666665533  56677887654

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG2444|consensus

Probab=98.09  E-value=1.3e-05  Score=65.18  Aligned_cols=141  Identities=14%  Similarity=0.124  Sum_probs=83.8

Q ss_pred             EEEEEeCCceEEEEEcCCCCCccc-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCcee
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRP-VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVK  279 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~  279 (444)
                      .+...+.+|.|+-++++   ..+. ...-..+.....   ...-+..+++|+.+|.|++|.....+.....+..-...|-
T Consensus        32 ~l~~~sa~~~v~~~~~~---k~k~s~rse~~~~e~~~---v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~  105 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVR---KHKESCRSERFIDEGQR---VVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESID  105 (238)
T ss_pred             hhccccCCcccccchhh---hhhhhhhhhhhhhccee---ecccCceEEeecccceEEEecCCccchHHHhhhcccccce
Confidence            34455778888888887   2221 111112222111   1123567899999999999987742222222222222222


Q ss_pred             E-EEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cC-CceeEEEEcCCCcccccchhhhhcccc--ccCCCccccCC
Q psy8152         280 D-IACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQ-SRLTSILVRSDFSLENETKKEEQEHSE--EKGDSDEKYDP  354 (444)
Q Consensus       280 ~-~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~~~~~~~~~~~~s~--~~d~~i~~W~~  354 (444)
                      + +.--.++.+..+++.+|.||.|++...+.+.... |. .++..+....         ..++++.+  |.+..++.|++
T Consensus       106 ~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~---------sd~~i~~a~~S~d~~~k~W~v  176 (238)
T KOG2444|consen  106 LGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVG---------SDEFLKIADTSHDRVLKKWNV  176 (238)
T ss_pred             eccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEec---------CCceEEeeccccchhhhhcch
Confidence            2 2222344588899999999999999988877665 44 3333333322         23566666  88888999988


Q ss_pred             Cc
Q psy8152         355 EH  356 (444)
Q Consensus       355 ~~  356 (444)
                      ..
T Consensus       177 e~  178 (238)
T KOG2444|consen  177 EK  178 (238)
T ss_pred             hh
Confidence            74

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.08  E-value=0.00013  Score=71.97  Aligned_cols=143  Identities=22%  Similarity=0.254  Sum_probs=98.2

Q ss_pred             CCEEEEe-eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-------CCEEEEEeCCce
Q psy8152         139 SNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-------SDKVAVCSKQGY  210 (444)
Q Consensus       139 ~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~l~~~~~d~~  210 (444)
                      .++|+.. ...+.|+-.|+..|+.+..++.+...                 +|..+  .|+       ....++|-.+..
T Consensus       493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~-----------------~v~~~--~p~~K~aqlt~e~tflGls~n~  553 (794)
T PF08553_consen  493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDI-----------------PVVDI--APDSKFAQLTNEQTFLGLSDNS  553 (794)
T ss_pred             cceEeecCCCCCceEEEecCCCcEEEEeecCCCc-----------------ceeEe--cccccccccCCCceEEEECCCc
Confidence            3444443 45678999999999999999887751                 13332  232       234456777889


Q ss_pred             EEEEEcCCCCCccceEE-E--eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         211 VRVYDPKITTQRRPVLK-V--DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       211 i~i~d~~~~~~~~~~~~-~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      |..||.|..+ .+.+.. .  .......+|++-+.+| +||+|+.+|.||+||--. .+....|++...+|.+|..+.+|
T Consensus       554 lfriDpR~~~-~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g-~~AKT~lp~lG~pI~~iDvt~DG  630 (794)
T PF08553_consen  554 LFRIDPRLSG-NKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLG-KRAKTALPGLGDPIIGIDVTADG  630 (794)
T ss_pred             eEEeccCCCC-CceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccc-hhhhhcCCCCCCCeeEEEecCCC
Confidence            9999999222 222211 1  1234567788887777 799999999999999543 44455666778999999999999


Q ss_pred             CEEEEEECCCcEEEEEc
Q psy8152         288 NLILSVSLDRHFRVHDF  304 (444)
Q Consensus       288 ~~l~s~~~dg~i~vw~~  304 (444)
                      ++|++.+. ..|.+++.
T Consensus       631 kwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  631 KWILATCK-TYLLLIDT  646 (794)
T ss_pred             cEEEEeec-ceEEEEEE
Confidence            99887664 45666654

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.08  E-value=0.0024  Score=59.25  Aligned_cols=220  Identities=12%  Similarity=0.011  Sum_probs=142.7

Q ss_pred             eEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec---CCcEEEEEcCCCCcc
Q psy8152          45 VLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK---SGDVKLWRYKTEPDQ  120 (444)
Q Consensus        45 v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~  120 (444)
                      -..++.+ +.+..+ ++...++.|.+.|..+.+....... +....-..++++++.+.++..   ++++.+.|..+++..
T Consensus        76 p~~i~v~-~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~  153 (381)
T COG3391          76 PAGVAVN-PAGNKVYVTTGDSNTVSVIDTATNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT  153 (381)
T ss_pred             ccceeeC-CCCCeEEEecCCCCeEEEEcCcccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence            3566777 456644 4455568999999887777776653 445556778898877666655   688999998888877


Q ss_pred             ccccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         121 WTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       121 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      .....-..+ ..+++.|+++.++.+. .++.|.+.|........ -.....             .........+.+.|++
T Consensus       154 ~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~-------------~~~~~~P~~i~v~~~g  218 (381)
T COG3391         154 ATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSL-------------VGVGTGPAGIAVDPDG  218 (381)
T ss_pred             EEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccc-------------cccCCCCceEEECCCC
Confidence            652222234 8999999998666655 78899999976654442 110000             0001135678899999


Q ss_pred             CEEEEEeCC---ceEEEEEcCCCCCccceEE-EeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEeccc
Q psy8152         200 DKVAVCSKQ---GYVRVYDPKITTQRRPVLK-VDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       200 ~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      .++.+....   +.+...|..   ....... +.........+.++|+|+++.+. +..+.+.+.|..+ ......+...
T Consensus       219 ~~~yV~~~~~~~~~v~~id~~---~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~-~~v~~~~~~~  294 (381)
T COG3391         219 NRVYVANDGSGSNNVLKIDTA---TGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGAT-DRVVKTGPTG  294 (381)
T ss_pred             CEEEEEeccCCCceEEEEeCC---CceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCC-Cceeeeeccc
Confidence            766554443   588888888   4444433 12111145678999999998887 4448899999888 7766665533


Q ss_pred             cC---ceeEEEecC
Q psy8152         275 AG---CVKDIACPL  285 (444)
Q Consensus       275 ~~---~i~~~~~s~  285 (444)
                      ..   .+..+++.+
T Consensus       295 ~~~~~~~~~~~~~~  308 (381)
T COG3391         295 NEALGEPVSIAISP  308 (381)
T ss_pred             ccccccceecccee
Confidence            22   344555544

>KOG1897|consensus

Probab=98.07  E-value=0.0086  Score=59.31  Aligned_cols=297  Identities=10%  Similarity=0.113  Sum_probs=161.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc-cceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN-TNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~-~~~~~   83 (444)
                      +.++|.++..+|.+.-|.+..........+...  --..++.--.|+ ..+..-+.+..|.-..+|... +++. ..+.+
T Consensus       594 d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~--lGt~P~~Lr~f~-sk~~t~vfa~sdrP~viY~~n-~kLv~spls~  669 (1096)
T KOG1897|consen  594 DIHYLLVALGDGALLYFVLDINTGQLSDRKKVT--LGTQPISLRTFS-SKSRTAVFALSDRPTVIYSSN-GKLVYSPLSL  669 (1096)
T ss_pred             cceEEEEEcCCceEEEEEEEcccceEccccccc--cCCCCcEEEEEe-eCCceEEEEeCCCCEEEEecC-CcEEEeccch
Confidence            367899999999999888766553222111111  123456666676 344444444445555566543 3322 22221


Q ss_pred             ccccccEEEEEe--CCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEeeCC------------
Q psy8152          84 SFGEGDIVGVSR--YDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGGKE------------  148 (444)
Q Consensus        84 ~~~~~~v~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d------------  148 (444)
                      .. ...+..++.  -+..++++. .+.+++..+..-+.+. ....-......+++.+....+++.+..            
T Consensus       670 ke-v~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~  747 (1096)
T KOG1897|consen  670 KE-VNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEY  747 (1096)
T ss_pred             HH-hhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcc
Confidence            11 222333321  133455553 4466776655433221 123334455667776644444443321            


Q ss_pred             --CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeC----------CceEEEEE
Q psy8152         149 --NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSK----------QGYVRVYD  215 (444)
Q Consensus       149 --~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~----------d~~i~i~d  215 (444)
                        ..++++|-++-+.+...+....              .....|.++.|..+ +.++++|+.          .|.|.+|.
T Consensus       748 ~~s~l~vlD~nTf~vl~~hef~~~--------------E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe  813 (1096)
T KOG1897|consen  748 EVSFLRVLDQNTFEVLSSHEFERN--------------ETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFE  813 (1096)
T ss_pred             eEEEEEEecCCceeEEeecccccc--------------ceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEE
Confidence              1245555554433322211111              00113566668877 577777753          57888888


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      ....++.+.+..... .+.+.++..- +|++||.  -...|++|+..+ .+.++.-..|..++..+...-.+..++.|..
T Consensus       814 ~~e~~~L~~v~e~~v-~Gav~aL~~f-ngkllA~--In~~vrLye~t~-~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDl  888 (1096)
T KOG1897|consen  814 FEELNSLELVAETVV-KGAVYALVEF-NGKLLAG--INQSVRLYEWTT-ERELRIECNISNPIIALDLQVKGDEIAVGDL  888 (1096)
T ss_pred             EecCCceeeeeeeee-ccceeehhhh-CCeEEEe--cCcEEEEEEccc-cceehhhhcccCCeEEEEEEecCcEEEEeec
Confidence            871112222222221 2233333221 5766654  455799999998 7777777788889999999889999999998


Q ss_pred             CCcEEEEEcCCCc--eE--EEeecCCceeEEEEcC
Q psy8152         296 DRHFRVHDFHSKK--LL--RKDYMQSRLTSILVRS  326 (444)
Q Consensus       296 dg~i~vw~~~~~~--~~--~~~~~~~~i~~~~~~~  326 (444)
                      -++|.+......+  ..  ++-+++.+++++.+-.
T Consensus       889 m~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~  923 (1096)
T KOG1897|consen  889 MRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILD  923 (1096)
T ss_pred             cceEEEEEEeccCCceEEeehhhCccceeeEEEec
Confidence            8888776655433  43  3334777777777654

>KOG4441|consensus

Probab=98.07  E-value=0.0012  Score=64.17  Aligned_cols=227  Identities=13%  Similarity=0.119  Sum_probs=130.7

Q ss_pred             cccEEEecCCC------cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC------CeEEEEeCC
Q psy8152           6 DYNIYIGSSTG------AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG------QKIKIYDTD   73 (444)
Q Consensus         6 ~~~l~~g~~dg------~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~   73 (444)
                      +..+++|+..+      .+..||..++.     +..+..+.+...-.+++..  ++...++|+.+      .++..||..
T Consensus       285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~-----w~~~a~m~~~r~~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~  357 (571)
T KOG4441|consen  285 GKLVAVGGYNRQGQSLRSVECYDPKTNE-----WSSLAPMPSPRCRVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPR  357 (571)
T ss_pred             CeEEEECCCCCCCcccceeEEecCCcCc-----EeecCCCCcccccccEEEE--CCEEEEEccccCCCcccceEEEecCC
Confidence            45677887774      67778877775     2333333445556667776  36777888888      467788888


Q ss_pred             CCccccceeeccccccEEEEEeCCCeEEEEecCCc-----EEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeC
Q psy8152          74 FKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD-----VKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGK  147 (444)
Q Consensus        74 ~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  147 (444)
                      +.+....-.........-...-+|.+.++|+.+|.     |-.||..+.+... ......+........ ++.+.++||.
T Consensus       358 ~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~-va~m~~~r~~~gv~~~~g~iYi~GG~  436 (571)
T KOG4441|consen  358 TNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP-VAPMLTRRSGHGVAVLGGKLYIIGGG  436 (571)
T ss_pred             CCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccc-cCCCCcceeeeEEEEECCEEEEEcCc
Confidence            77755533222212222222457888899998864     6677877665442 222222333433333 7888888886


Q ss_pred             CC------eEEEEEcCCceeee--eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-----eEEEE
Q psy8152         148 EN------DLKLWDLNTTKNIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-----YVRVY  214 (444)
Q Consensus       148 d~------~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~  214 (444)
                      ++      .+..||..+++-..  .+.....                   -..++.. ++.+.+.|+.++     +|..|
T Consensus       437 ~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~-------------------~~g~a~~-~~~iYvvGG~~~~~~~~~VE~y  496 (571)
T KOG4441|consen  437 DGSSNCLNSVECYDPETNTWTLIAPMNTRRS-------------------GFGVAVL-NGKIYVVGGFDGTSALSSVERY  496 (571)
T ss_pred             CCCccccceEEEEcCCCCceeecCCcccccc-------------------cceEEEE-CCEEEEECCccCCCccceEEEE
Confidence            54      45677777654322  2211111                   2223332 567788888776     37778


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCc-----EEEEEcCC
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGD-----MMAVDLRG  263 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~  263 (444)
                      |.. +.+...+..+......+..+.+  ++...++|+.+|.     |..||..+
T Consensus       497 dp~-~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~  547 (571)
T KOG4441|consen  497 DPE-TNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPET  547 (571)
T ss_pred             cCC-CCceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCC
Confidence            888 4444444333333333333333  5667777887763     55666554

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.03  E-value=0.0022  Score=59.22  Aligned_cols=223  Identities=13%  Similarity=0.163  Sum_probs=119.1

Q ss_pred             cccEEEecCCCcEEEEEcCCCccce------------------------------------eeeeeeccc-CcccceEEE
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCII------------------------------------KNIQNVKYI-TNKASVLAL   48 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~------------------------------------~~~~~~~~~-~h~~~v~~~   48 (444)
                      ...|++|...|.|-||.+...+...                                    ..+..+..+ ...++|+++
T Consensus        13 t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~~~g~vtal   92 (395)
T PF08596_consen   13 TLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLDAKQGPVTAL   92 (395)
T ss_dssp             TTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE---S-SEEEE
T ss_pred             CceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhheeccCCcEeEE
Confidence            3678999999999999875442210                                    011111111 336899999


Q ss_pred             eeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc------ccccEEEE--E---e--CC---CeEEEEecCCcEEEE
Q psy8152          49 NWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF------GEGDIVGV--S---R--YD---ECILTAVKSGDVKLW  112 (444)
Q Consensus        49 ~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------~~~~v~~~--s---~--~~---~~l~~~~~dg~i~iw  112 (444)
                      +.|  +=.+++.|..+|.+.|.|+.....+..-....      ....+.++  +   .  ++   -++++|+..|.+.+|
T Consensus        93 ~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~f  170 (395)
T PF08596_consen   93 KNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTF  170 (395)
T ss_dssp             EE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEE
T ss_pred             ecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEE
Confidence            998  57899999999999999998776665533222      12233333  2   1  22   358889999999999


Q ss_pred             EcCC---CCcc----ccccccCCCeEEEE-Eecc-C-------------------CEEEEeeCCCeEEEEEcCCceeeee
Q psy8152         113 RYKT---EPDQ----WTNFNVGPQLECMK-HNKH-S-------------------NIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus       113 ~~~~---~~~~----~~~~~~~~~v~~~~-~~~~-~-------------------~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .+.-   +...    .....+.++|..+. |+.+ +                   +-++.......++++...+.+..++
T Consensus       171 kIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K  250 (395)
T PF08596_consen  171 KILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHK  250 (395)
T ss_dssp             EEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEE
T ss_pred             EEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCCCcccce
Confidence            8741   1111    11224556666655 3221 1                   1233334467899999888776655


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEe-----cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC----CCe
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-----PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD----VAL  235 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----~~i  235 (444)
                      ......                  .+..+.+-     ..+..|++-..+|.|++|.+.   ..+.+..+....    ..+
T Consensus       251 ~~~~~~------------------~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP---~Lkei~~~~l~~~~d~~~~  309 (395)
T PF08596_consen  251 SFDDPF------------------LCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLP---SLKEIKSVSLPPPLDSRRL  309 (395)
T ss_dssp             E-SS-E------------------EEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETT---T--EEEEEE-SS---HHHH
T ss_pred             eecccc------------------ccceEEEEeecccCCceEEEEEECCCcEEEEECC---CchHhhcccCCCccccccc
Confidence            442211                  23334442     245778888999999999999   777777766532    234


Q ss_pred             eEEEEccCCCEEEEEc
Q psy8152         236 SCITTTNQSHYVIVGS  251 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~  251 (444)
                      ...+++++|..++-.+
T Consensus       310 ~~ssis~~Gdi~~~~g  325 (395)
T PF08596_consen  310 SSSSISRNGDIFYWTG  325 (395)
T ss_dssp             TT-EE-TTS-EEEE-S
T ss_pred             cccEECCCCCEEEEeC
Confidence            4566677777665543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG4640|consensus

Probab=98.02  E-value=3.2e-05  Score=71.79  Aligned_cols=93  Identities=13%  Similarity=0.203  Sum_probs=79.4

Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee-EEEEccCCCEEEEEcCCCcEEEEEcCCCCc
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS-CITTTNQSHYVIVGSTTGDMMAVDLRGKGK  266 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  266 (444)
                      ..|..+.|+|.-.+||.+..+|.|.++.+.    .+.+.+++.+...++ +++|.|+|++||+|-.||+|++.|+.+ +.
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n----~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~-~~   95 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN----WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEK-GG   95 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec----cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccC-CC
Confidence            358889999999999999999999999987    777888887777777 999999999999999999999999999 77


Q ss_pred             ceeEec-cccCceeEEEecC
Q psy8152         267 PCYKYK-GFAGCVKDIACPL  285 (444)
Q Consensus       267 ~~~~~~-~h~~~i~~~~~s~  285 (444)
                      .+..+. .....|.++.|.+
T Consensus        96 ~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   96 RLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             ceeccccccccchheeeccc
Confidence            776632 2356788888863

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.00  E-value=0.0032  Score=55.91  Aligned_cols=208  Identities=13%  Similarity=0.036  Sum_probs=120.5

Q ss_pred             eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152          99 CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus        99 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  178 (444)
                      ++.+--..+.|.-|+..+++..  .+.+...+.++..-..+..|+++..  -+.++++.++..+..+.....        
T Consensus        39 L~w~DI~~~~i~r~~~~~g~~~--~~~~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~--------  106 (307)
T COG3386          39 LLWVDILGGRIHRLDPETGKKR--VFPSPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPED--------  106 (307)
T ss_pred             EEEEeCCCCeEEEecCCcCceE--EEECCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccC--------
Confidence            4555556778888888766554  4445555566655544545555443  366677655444222211111        


Q ss_pred             CCcccccCccceeEEEEecCCCEEEEEeC---------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSDKVAVCSK---------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                           .......+.+...|+|.+.++...         -..-.+|-+.  .....+..+..+-..-+.|+|||+++.|+.
T Consensus       107 -----~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~--p~g~~~~l~~~~~~~~NGla~SpDg~tly~  179 (307)
T COG3386         107 -----GLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVD--PDGGVVRLLDDDLTIPNGLAFSPDGKTLYV  179 (307)
T ss_pred             -----CCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEc--CCCCEEEeecCcEEecCceEECCCCCEEEE
Confidence                 001124667788888876664433         0111344444  112333333333444578999999987777


Q ss_pred             EcC-CCcEEEEEcCC-CC----c-ceeEeccccCceeEEEecCCCCEEEEEECCC-cEEEEEcCCCceEEEeecC-Ccee
Q psy8152         250 GST-TGDMMAVDLRG-KG----K-PCYKYKGFAGCVKDIACPLNENLILSVSLDR-HFRVHDFHSKKLLRKDYMQ-SRLT  320 (444)
Q Consensus       250 ~~~-dg~i~iwd~~~-~~----~-~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg-~i~vw~~~~~~~~~~~~~~-~~i~  320 (444)
                      +.. .+.|+-|++.. .+    + ....+....+..-.++...+|.+.+++...| .|.+|+.. ++++..+... ..++
T Consensus       180 aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t  258 (307)
T COG3386         180 ADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPT  258 (307)
T ss_pred             EeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCc
Confidence            654 47788777652 01    1 1112222345555677777888776555554 89999998 8998888866 7788


Q ss_pred             EEEEcC
Q psy8152         321 SILVRS  326 (444)
Q Consensus       321 ~~~~~~  326 (444)
                      +++|-.
T Consensus       259 ~~~FgG  264 (307)
T COG3386         259 NPAFGG  264 (307)
T ss_pred             cceEeC
Confidence            888864

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.99  E-value=0.00031  Score=65.36  Aligned_cols=176  Identities=15%  Similarity=0.115  Sum_probs=103.0

Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee---CC-CeEEEEEcCCceeeeeeecccceeeEeeeCCCccc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG---KE-NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      .+.+-|.. +.....+..-...+..-+|+|++..++...   .. ..+.++++.+++....+....              
T Consensus       174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g--------------  238 (425)
T COG0823         174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG--------------  238 (425)
T ss_pred             eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC--------------
Confidence            34444443 333333444455677788999887766542   22 468999999876544443222              


Q ss_pred             ccCccceeEEEEecCCCEEE-EEeCCce--EEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc-CCCc--EE
Q psy8152         184 LRRPVWVNGISFLPNSDKVA-VCSKQGY--VRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS-TTGD--MM  257 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~--i~  257 (444)
                           .-..-+|+|+|+.|+ +...||.  |.++|+.   ... +..+....+.-+.-.|+|+|++|+..+ ..|.  |.
T Consensus       239 -----~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~---~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~  309 (425)
T COG0823         239 -----NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD---GKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIY  309 (425)
T ss_pred             -----ccCCccCCCCCCEEEEEECCCCCccEEEEcCC---CCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence                 244568999996665 5555665  5556666   222 333443333344678999999887644 4444  55


Q ss_pred             EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC-Cc--EEEEEcCCCce
Q psy8152         258 AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD-RH--FRVHDFHSKKL  309 (444)
Q Consensus       258 iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-g~--i~vw~~~~~~~  309 (444)
                      ++++..  .....+....+.-..-.|+|+|++|+..+.. |.  |.+.++.++..
T Consensus       310 ~~~~~g--~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~  362 (425)
T COG0823         310 LYDLEG--SQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK  362 (425)
T ss_pred             EECCCC--CceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCc
Confidence            556554  3334444222222266899999988877643 44  66666666543

>PHA02713 hypothetical protein; Provisional

Probab=97.97  E-value=0.00095  Score=65.12  Aligned_cols=219  Identities=7%  Similarity=0.021  Sum_probs=109.4

Q ss_pred             eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC------CcEEEEEcCCCCccccccccCCCe--EEEEEec
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS------GDVKLWRYKTEPDQWTNFNVGPQL--ECMKHNK  137 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~v--~~~~~~~  137 (444)
                      .+..||..+.+....-..+...........++..++.|+.+      ..+..||..+..... ...-..+.  .+++ .-
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~~m~~~R~~~~~~-~~  350 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVE-LPPMIKNRCRFSLA-VI  350 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCeEee-CCCCcchhhceeEE-EE
Confidence            56778887766443322221111112233567777777753      347788877664332 11111111  1222 22


Q ss_pred             cCCEEEEeeCCC-----eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc---
Q psy8152         138 HSNIIATGGKEN-----DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG---  209 (444)
Q Consensus       138 ~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---  209 (444)
                      ++++.+.||.++     .+..||..+.+-...-.....                .... +++ .-++++.+.|+.++   
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~----------------r~~~-~~~-~~~g~IYviGG~~~~~~  412 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIA----------------LSSY-GMC-VLDQYIYIIGGRTEHID  412 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcc----------------cccc-cEE-EECCEEEEEeCCCcccc
Confidence            677888888754     377788776532211110000                0011 112 22567777776542   


Q ss_pred             --------------------eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC------CcEEEEEcCC
Q psy8152         210 --------------------YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT------GDMMAVDLRG  263 (444)
Q Consensus       210 --------------------~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~~  263 (444)
                                          .+..||.. ......+..+.........+++  ++++.+.|+.+      ..+..||..+
T Consensus       413 ~~~~~~~~~~~~~~~~~~~~~ve~YDP~-td~W~~v~~m~~~r~~~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~  489 (557)
T PHA02713        413 YTSVHHMNSIDMEEDTHSSNKVIRYDTV-NNIWETLPNFWTGTIRPGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNT  489 (557)
T ss_pred             cccccccccccccccccccceEEEECCC-CCeEeecCCCCcccccCcEEEE--CCEEEEEeCCCCCCccceeEEEecCCC
Confidence                                47778877 3333333322222221122222  56666667654      2467788775


Q ss_pred             --CCcceeEeccccCceeEEEecCCCCEEEEEECCC--cEEEEEcCCCce
Q psy8152         264 --KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR--HFRVHDFHSKKL  309 (444)
Q Consensus       264 --~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg--~i~vw~~~~~~~  309 (444)
                        ....+..++........+++  ++++.++|+.++  .+-.||..+.+-
T Consensus       490 ~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W  537 (557)
T PHA02713        490 YNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEW  537 (557)
T ss_pred             CCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccc
Confidence              13334444433333333333  678888999888  667777766543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.95  E-value=0.00049  Score=64.13  Aligned_cols=178  Identities=13%  Similarity=0.098  Sum_probs=104.8

Q ss_pred             EEEeCCCeEEEEe---cC-CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-CCCe--EEEEEcCCceeeee
Q psy8152          92 GVSRYDECILTAV---KS-GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-KEND--LKLWDLNTTKNIFS  164 (444)
Q Consensus        92 ~~s~~~~~l~~~~---~d-g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~--i~vwd~~~~~~~~~  164 (444)
                      .+++++..++...   .. ..+.++++.+++... .....+.-..-+|+|+|+.|+.+. .+|.  |.++|+..+. +..
T Consensus       199 ~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~-i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~  276 (425)
T COG0823         199 AWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPV-ILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPR  276 (425)
T ss_pred             ccCcCCCceEEEEEecCCCceEEEEeccCCccce-eeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-cee
Confidence            4567776644432   22 468999999887664 444555566779999988877554 4554  5666776655 222


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEE--EEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRV--YDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i--~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +.....                  .-..-.|+|+|+.|+.. +..|.-.|  +++.    ......+......-..-.|+
T Consensus       277 Lt~~~g------------------i~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~----g~~~~riT~~~~~~~~p~~S  334 (425)
T COG0823         277 LTNGFG------------------INTSPSWSPDGSKIVFTSDRGGRPQIYLYDLE----GSQVTRLTFSGGGNSNPVWS  334 (425)
T ss_pred             cccCCc------------------cccCccCCCCCCEEEEEeCCCCCcceEEECCC----CCceeEeeccCCCCcCccCC
Confidence            332222                  23355799999777644 44555444  4554    22223333232222367899


Q ss_pred             cCCCEEEEEcC-CCc--EEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC
Q psy8152         242 NQSHYVIVGST-TGD--MMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       242 ~~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      |+|++|+..+. .|.  |.+.++.+ +..+..+. +......-.|.|++..++..+.
T Consensus       335 pdG~~i~~~~~~~g~~~i~~~~~~~-~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         335 PDGDKIVFESSSGGQWDIDKNDLAS-GGKIRILT-STYLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             CCCCEEEEEeccCCceeeEEeccCC-CCcEEEcc-ccccCCCCCcCCCCceEEEecc
Confidence            99999887654 344  66677766 44344443 3333445578888876665543

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.94  E-value=0.0016  Score=47.16  Aligned_cols=100  Identities=14%  Similarity=0.277  Sum_probs=70.8

Q ss_pred             eEEEEEec-cC---CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         130 LECMKHNK-HS---NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       130 v~~~~~~~-~~---~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      |+++++.. ++   +.|++|+.|..|++|+-.  ..+..+.....                   |++++-... ..|+.+
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~-------------------v~~L~~~~~-~~F~Y~   59 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDK-------------------VTSLCSLGG-GRFAYA   59 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccc-------------------eEEEEEcCC-CEEEEE
Confidence            67777766 33   689999999999999844  56666655554                   888887765 679999


Q ss_pred             eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc-CC---CEEEEEcCCCcEE
Q psy8152         206 SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN-QS---HYVIVGSTTGDMM  257 (444)
Q Consensus       206 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~---~~l~~~~~dg~i~  257 (444)
                      ..+|+|-+|+-.     ..+...+.... ++++++.. ++   .-|++|-.+|.|-
T Consensus        60 l~NGTVGvY~~~-----~RlWRiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   60 LANGTVGVYDRS-----QRLWRIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             ecCCEEEEEeCc-----ceeeeeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            999999999854     33444443333 56665543 22   3688898888774

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.94  E-value=0.0096  Score=51.04  Aligned_cols=171  Identities=12%  Similarity=0.125  Sum_probs=98.9

Q ss_pred             ccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         125 NVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       125 ~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      +-...+..++|+|+ +.++++....+.|..++.. |+.+..+.....                 .-.-.|++..++.+++
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~-----------------~D~EgI~y~g~~~~vl   80 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGF-----------------GDYEGITYLGNGRYVL   80 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS------------------SSEEEEEE-STTEEEE
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCC-----------------CCceeEEEECCCEEEE
Confidence            44456999999995 5566677778888888864 777766654331                 1377889988777777


Q ss_pred             EEeCCceEEEEEcCCCCCc---cceEEEe-----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC--CCcceeEe--
Q psy8152         204 VCSKQGYVRVYDPKITTQR---RPVLKVD-----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG--KGKPCYKY--  271 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~~~---~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~--  271 (444)
                      +.-.++.+.++++......   ..+..+.     .++..+-.++|.|.++.|+++-...-..||.+..  ....+...  
T Consensus        81 ~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~  160 (248)
T PF06977_consen   81 SEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDD  160 (248)
T ss_dssp             EETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-
T ss_pred             EEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccc
Confidence            7667899999998511111   1112222     2445689999999877777777776667776653  01111111  


Q ss_pred             ------ccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         272 ------KGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       272 ------~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                            ......+.+++++|.. ++++-......|..+| ..|+++..+.
T Consensus       161 ~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~  209 (248)
T PF06977_consen  161 QDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLS  209 (248)
T ss_dssp             HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE
T ss_pred             cccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEE
Confidence                  1233467888999865 5666666778888999 5677766655

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG4441|consensus

Probab=97.88  E-value=0.0023  Score=62.40  Aligned_cols=230  Identities=11%  Similarity=0.079  Sum_probs=125.1

Q ss_pred             CCcEEEEEEcC------CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC------CcEEEEEcCCCCccc
Q psy8152          54 EESELLIAYSG------QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS------GDVKLWRYKTEPDQW  121 (444)
Q Consensus        54 ~~~~l~~~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~  121 (444)
                      .+..++.|+..      ..+..||..++........+...........++.+.++|+.+      .++..||..+.+...
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~  363 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP  363 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence            45667777776      468889988876555444333333333345677888889888      346778877766442


Q ss_pred             cccccCCCeEEEEEec-cCCEEEEeeCCCe-----EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         122 TNFNVGPQLECMKHNK-HSNIIATGGKEND-----LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~-----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                       ...-..+-..+.... +|.+.|+||.||.     +-.||..+.+--........                ....-.+  
T Consensus       364 -~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~----------------r~~~gv~--  424 (571)
T KOG4441|consen  364 -VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTR----------------RSGHGVA--  424 (571)
T ss_pred             -cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcc----------------eeeeEEE--
Confidence             222111112222222 7888999998864     55677665432211110001                0011112  


Q ss_pred             ecCCCEEEEEeCCc------eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCc-----EEEEEcCCC
Q psy8152         196 LPNSDKVAVCSKQG------YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGD-----MMAVDLRGK  264 (444)
Q Consensus       196 ~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~  264 (444)
                      .-+|.+.++|+.++      ++..||.. +.....+..+...........+  ++.+.+.|+.++.     |..||..+ 
T Consensus       425 ~~~g~iYi~GG~~~~~~~l~sve~YDP~-t~~W~~~~~M~~~R~~~g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~-  500 (571)
T KOG4441|consen  425 VLGGKLYIIGGGDGSSNCLNSVECYDPE-TNTWTLIAPMNTRRSGFGVAVL--NGKIYVVGGFDGTSALSSVERYDPET-  500 (571)
T ss_pred             EECCEEEEEcCcCCCccccceEEEEcCC-CCceeecCCcccccccceEEEE--CCEEEEECCccCCCccceEEEEcCCC-
Confidence            23567778887554      57788887 4455544444433333333333  5777788887763     67788876 


Q ss_pred             CcceeE--eccccCceeEEEecCCCCEEEEEECCCc-----EEEEEcCCCc
Q psy8152         265 GKPCYK--YKGFAGCVKDIACPLNENLILSVSLDRH-----FRVHDFHSKK  308 (444)
Q Consensus       265 ~~~~~~--~~~h~~~i~~~~~s~~~~~l~s~~~dg~-----i~vw~~~~~~  308 (444)
                      .+-...  +......+..+.+  ++...++|+.||.     |..||..+.+
T Consensus       501 ~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  501 NQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             CceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCCCc
Confidence            432222  2222222222233  4667778887753     5556555443

>KOG2395|consensus

Probab=97.84  E-value=0.00043  Score=63.34  Aligned_cols=143  Identities=23%  Similarity=0.353  Sum_probs=98.6

Q ss_pred             cCCE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-------EEEEEeCCc
Q psy8152         138 HSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-------KVAVCSKQG  209 (444)
Q Consensus       138 ~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~d~  209 (444)
                      +.++ |.++.....|+-.|+..|+.+..++.+..                   |+-+.+.|+.+       .-+.|-.+.
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-------------------i~mv~~t~d~K~~Ql~~e~TlvGLs~n  404 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-------------------INMVDITPDFKFAQLTSEQTLVGLSDN  404 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCC-------------------cceeeccCCcchhcccccccEEeecCC
Confidence            3344 44566667789999999999999888776                   55566666542       123566788


Q ss_pred             eEEEEEcCCCCCcc-ceEEEeCC----CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152         210 YVRVYDPKITTQRR-PVLKVDIP----DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       210 ~i~i~d~~~~~~~~-~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s  284 (444)
                      .|.-||.|.  +.. .+....+|    .....|.+-..+| +|++|+.+|.|++||.-. .+....|++...+|+.|..+
T Consensus       405 ~vfriDpRv--~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~-~~AKTAlPgLG~~I~hVdvt  480 (644)
T KOG2395|consen  405 SVFRIDPRV--QGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIG-RRAKTALPGLGDAIKHVDVT  480 (644)
T ss_pred             ceEEecccc--cCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhh-hhhhhcccccCCceeeEEee
Confidence            999999982  222 22222222    2345566655555 899999999999999743 45556678888999999999


Q ss_pred             CCCCEEEEEECCCcEEEEEc
Q psy8152         285 LNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       285 ~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+|++|++.+. ..+.+-++
T Consensus       481 adGKwil~Tc~-tyLlLi~t  499 (644)
T KOG2395|consen  481 ADGKWILATCK-TYLLLIDT  499 (644)
T ss_pred             ccCcEEEEecc-cEEEEEEE
Confidence            99998877654 44555544

>KOG4640|consensus

Probab=97.84  E-value=9.7e-05  Score=68.73  Aligned_cols=91  Identities=11%  Similarity=0.112  Sum_probs=78.1

Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCcee-EEEecCCCCEEEEEECCCcEEEEEcCCCceEE
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVK-DIACPLNENLILSVSLDRHFRVHDFHSKKLLR  311 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~-~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~  311 (444)
                      ..|..+.|+|.-.+||.+..+|.|.+..+.  .+.+.+++-|...++ +++|.|+|++||.|-.||+|++.|+.++..+.
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n--~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~   98 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN--WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV   98 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec--cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence            457889999999999999999999998877  578888886777777 99999999999999999999999999988877


Q ss_pred             E--eecCCceeEEEEc
Q psy8152         312 K--DYMQSRLTSILVR  325 (444)
Q Consensus       312 ~--~~~~~~i~~~~~~  325 (444)
                      .  +.....|.++.|.
T Consensus        99 ~~~~s~e~~is~~~w~  114 (665)
T KOG4640|consen   99 SFLFSVETDISKGIWD  114 (665)
T ss_pred             ccccccccchheeecc
Confidence            7  3456667777764

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=97.76  E-value=0.034  Score=51.50  Aligned_cols=292  Identities=11%  Similarity=0.065  Sum_probs=144.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec---cCCcEEEEEEcCCeEEEEeCCC--Cc--
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN---VEESELLIAYSGQKIKIYDTDF--KN--   76 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~l~~~~~d~~i~vw~~~~--~~--   76 (444)
                      .+...|++|+..|.|+||...........+  +-...-..+|..|..-+   ......++.-.-..+.||.+..  +.  
T Consensus        35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~l--llE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~  112 (418)
T PF14727_consen   35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDL--LLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVE  112 (418)
T ss_pred             CCccEEEEeccccEEEEEccCCCCCCCccE--EEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcc
Confidence            455799999999999999986655321111  11113467888887432   2233333335557888888732  11  


Q ss_pred             ---cccceeecccccc--EEEE--Ee----C-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEE
Q psy8152          77 ---FNTNTDVSFGEGD--IVGV--SR----Y-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        77 ---~~~~~~~~~~~~~--v~~~--s~----~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  144 (444)
                         ....-....|.-.  ...+  -|    . ..+|++-+.||.+.+|+-+...... +....--...++|.+....|++
T Consensus       113 ~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~-~lp~~llPgPl~Y~~~tDsfvt  191 (418)
T PF14727_consen  113 HGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSR-FLPDFLLPGPLCYCPRTDSFVT  191 (418)
T ss_pred             cCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEE-EcCCCCCCcCeEEeecCCEEEE
Confidence               1111111122222  2222  12    2 3568888999999999976543322 2222222335677787788999


Q ss_pred             eeCCCeEEEEEcCCceeeee----eecccc-eeeEeeeCCCcccccCccceeEEEEec---CCCEEEEEeCCceEEEEEc
Q psy8152         145 GGKENDLKLWDLNTTKNIFS----AKNVSH-RVLVYSVKPDEFDLRRPVWVNGISFLP---NSDKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       145 ~~~d~~i~vwd~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~  216 (444)
                      ++....|..|....-.....    ...... ....-.+.|+. .......+..|....   ....+++-+. .++.+.+.
T Consensus       192 ~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dW-s~nlGE~~l~i~v~~~~~~~~~IvvLge-r~Lf~l~~  269 (418)
T PF14727_consen  192 ASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDW-SFNLGEQALDIQVVRFSSSESDIVVLGE-RSLFCLKD  269 (418)
T ss_pred             ecCceeEEEecHHHhhhcccccccccccccccccccccccee-EEECCceeEEEEEEEcCCCCceEEEEec-ceEEEEcC
Confidence            99888888887643110000    000000 00000011110 001111234443322   2223333332 34555554


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEc------cC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE---ecCC
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTT------NQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA---CPLN  286 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~------~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~---~s~~  286 (444)
                      .  +..+..+++...  +.....|.      |. ...+++++.++++.||.=   .+++..-+....+| ++.   |..-
T Consensus       270 ~--G~l~~~krLd~~--p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d---~~L~WsA~l~~~PV-al~v~~~~~~  341 (418)
T PF14727_consen  270 N--GSLRFQKRLDYN--PSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYED---TTLVWSAQLPHVPV-ALSVANFNGL  341 (418)
T ss_pred             C--CeEEEEEecCCc--eeeEEEEEeecccCCCCceEEEEEecCCeEEEEeC---CeEEEecCCCCCCE-EEEecccCCC
Confidence            4  222333333222  11111121      22 124788899999999863   34444444333333 332   3233


Q ss_pred             CCEEEEEECCCcEEEEEcCCCc
Q psy8152         287 ENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       287 ~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      ...|++-+.+|.|.+-=+-+..
T Consensus       342 ~G~IV~Ls~~G~L~v~YLGTdP  363 (418)
T PF14727_consen  342 KGLIVSLSDEGQLSVSYLGTDP  363 (418)
T ss_pred             CceEEEEcCCCcEEEEEeCCCC
Confidence            4578888889988887665543

>KOG2444|consensus

Probab=97.75  E-value=4.9e-05  Score=61.89  Aligned_cols=103  Identities=17%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE-EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-C
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC-ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-G  276 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-~  276 (444)
                      +..+++|+.+|.|.+|...  ..+.....+......|.+ |.-..++.+..+++.+|.||.|++.. .+.+.....|. .
T Consensus        70 ~~~~~vG~~dg~v~~~n~n--~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p-~k~~g~~g~h~~~  146 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWN--LEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKP-NKVLGYVGQHNFE  146 (238)
T ss_pred             CceEEeecccceEEEecCC--ccchHHHhhhcccccceeccccccccceeEEeccCCceeeecccc-CceeeeeccccCC
Confidence            3678999999999999987  122221112222223332 22233456888999999999999988 77777666666 3


Q ss_pred             ceeEEEecCCCCEEEEE--ECCCcEEEEEc
Q psy8152         277 CVKDIACPLNENLILSV--SLDRHFRVHDF  304 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~--~~dg~i~vw~~  304 (444)
                      ++..+..+..+.+|+.+  |.|..++.|++
T Consensus       147 ~~e~~ivv~sd~~i~~a~~S~d~~~k~W~v  176 (238)
T KOG2444|consen  147 SGEELIVVGSDEFLKIADTSHDRVLKKWNV  176 (238)
T ss_pred             CcceeEEecCCceEEeeccccchhhhhcch
Confidence            33333333334444444  44444444444

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.75  E-value=0.041  Score=52.03  Aligned_cols=243  Identities=13%  Similarity=0.091  Sum_probs=125.7

Q ss_pred             ceEEEeeeccCCcEEEEE-EcC----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC-----------
Q psy8152          44 SVLALNWGNVEESELLIA-YSG----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG-----------  107 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~-~~d----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg-----------  107 (444)
                      .+..+.++ |++++||.+ +..    ..|+++|+.+++.+...- ......-..+.++++.|+....+.           
T Consensus       125 ~~~~~~~S-pdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i-~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~  202 (414)
T PF02897_consen  125 SLGGFSVS-PDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI-ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR  202 (414)
T ss_dssp             EEEEEEET-TTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE-EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred             EeeeeeEC-CCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc-cccccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence            44467788 799988864 333    359999999997765321 111122266677877766654332           


Q ss_pred             cEEEEEcCCCCcc--ccccccC-CC-eEEEEEeccCCEEEEeeC---C-CeEEEEEcCCc----eeeeeeecccceeeEe
Q psy8152         108 DVKLWRYKTEPDQ--WTNFNVG-PQ-LECMKHNKHSNIIATGGK---E-NDLKLWDLNTT----KNIFSAKNVSHRVLVY  175 (444)
Q Consensus       108 ~i~iw~~~~~~~~--~~~~~~~-~~-v~~~~~~~~~~~l~~~~~---d-~~i~vwd~~~~----~~~~~~~~~~~~~~~~  175 (444)
                      .|+.|.+.+....  ..+.... .. ...+..++++++|+....   + ..+.+.++..+    .....+.....     
T Consensus       203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~-----  277 (414)
T PF02897_consen  203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPRED-----  277 (414)
T ss_dssp             EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSS-----
T ss_pred             EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCC-----
Confidence            3677777665432  1122222 22 567888999998775433   2 45777787764    12222222111     


Q ss_pred             eeCCCcccccCccceeEEEEecCCCEEEEE---eCCceEEEEEcCCCCCc-cceEEEeCCCC--CeeEEEEccCCCEEEE
Q psy8152         176 SVKPDEFDLRRPVWVNGISFLPNSDKVAVC---SKQGYVRVYDPKITTQR-RPVLKVDIPDV--ALSCITTTNQSHYVIV  249 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~-~~~~~~~~~~~--~i~~~~~~~~~~~l~~  249 (444)
                                   .+....-+..+.+++..   ...+.|...++. .... .....+..+..  .+..+..  .+.+|+.
T Consensus       278 -------------~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~-~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl  341 (414)
T PF02897_consen  278 -------------GVEYYVDHHGDRLYILTNDDAPNGRLVAVDLA-DPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVL  341 (414)
T ss_dssp             -------------S-EEEEEEETTEEEEEE-TT-TT-EEEEEETT-STSGGGEEEEEE--SSSEEEEEEEE--ETTEEEE
T ss_pred             -------------ceEEEEEccCCEEEEeeCCCCCCcEEEEeccc-ccccccceeEEcCCCCceeEEEEEE--ECCEEEE
Confidence                         13333323344444433   234677777877 2221 11224445544  3444444  4445544


Q ss_pred             -EcCCC--cEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEE-EEE-EC--CCcEEEEEcCCCceE
Q psy8152         250 -GSTTG--DMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLI-LSV-SL--DRHFRVHDFHSKKLL  310 (444)
Q Consensus       250 -~~~dg--~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l-~s~-~~--dg~i~vw~~~~~~~~  310 (444)
                       ...++  .|+++++.. +.....+.. -.+.|..+...+++..+ ++. |.  -++++.||+.++++.
T Consensus       342 ~~~~~~~~~l~v~~~~~-~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  342 SYRENGSSRLRVYDLDD-GKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEETTEEEEEEEETT--TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             EEEECCccEEEEEECCC-CcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence             43443  588899883 344444442 34456666666665533 332 22  357888899888764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>smart00320 WD40 WD40 repeats

Probab=97.72  E-value=9.3e-05  Score=42.60  Aligned_cols=39  Identities=26%  Similarity=0.341  Sum_probs=34.8

Q ss_pred             CcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      .+++..+..|...|+++.|++.+.++++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            456677788999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1897|consensus

Probab=97.70  E-value=0.069  Score=53.28  Aligned_cols=315  Identities=11%  Similarity=0.028  Sum_probs=164.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc--CC---cEEEEEEcCCeEEEEeC-CCCccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV--EE---SELLIAYSGQKIKIYDT-DFKNFN   78 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~---~~l~~~~~d~~i~vw~~-~~~~~~   78 (444)
                      +..++++++.++.+....+....     ++......-...|.|+.++|-  ..   .++++|..+..+.+.-. .....+
T Consensus       498 n~sqVvvA~~~~~l~y~~i~~~~-----l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~  572 (1096)
T KOG1897|consen  498 NASQVVVAGGGLALFYLEIEDGG-----LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILI  572 (1096)
T ss_pred             cceEEEEecCccEEEEEEeeccc-----eeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCccee
Confidence            44567777777776666665554     222222233578999999952  22   37888988766655433 333333


Q ss_pred             cceeeccc--cccE--EEEEeCCCeEEEEecCCcEEEEEcCC--CCccccc--cccCCCeEEEEEeccCCEEEEeeCCCe
Q psy8152          79 TNTDVSFG--EGDI--VGVSRYDECILTAVKSGDVKLWRYKT--EPDQWTN--FNVGPQLECMKHNKHSNIIATGGKEND  150 (444)
Q Consensus        79 ~~~~~~~~--~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~  150 (444)
                      ........  ...|  .++--+..+|+++..||.+.-|.+..  ++.....  .-...|+.--.|+..+..-+.+..|.-
T Consensus       573 ~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP  652 (1096)
T KOG1897|consen  573 THEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRP  652 (1096)
T ss_pred             eeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCC
Confidence            33222221  1122  23344578999999999988776543  3322111  112445665666664433333344555


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE-EecCC--CEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS-FLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~  227 (444)
                      ..+|.-+ ++.+++--....                   +..++ |+.+.  ..|+++. .+.+++.-+. .-+...+++
T Consensus       653 ~viY~~n-~kLv~spls~ke-------------------v~~~c~f~s~a~~d~l~~~~-~~~l~i~tid-~iqkl~irt  710 (1096)
T KOG1897|consen  653 TVIYSSN-GKLVYSPLSLKE-------------------VNHMCPFNSDAYPDSLASAN-GGALTIGTID-EIQKLHIRT  710 (1096)
T ss_pred             EEEEecC-CcEEEeccchHH-------------------hhhhcccccccCCceEEEec-CCceEEEEec-chhhcceee
Confidence            5555543 333322111111                   22222 33222  4455544 4567777666 223444455


Q ss_pred             EeCCCCCeeEEEEccCCCEEEEEcCC--------------CcEEEEEcCCCCcceeEec--c--ccCceeEEEecCC-CC
Q psy8152         228 VDIPDVALSCITTTNQSHYVIVGSTT--------------GDMMAVDLRGKGKPCYKYK--G--FAGCVKDIACPLN-EN  288 (444)
Q Consensus       228 ~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~~~~~~~~~~--~--h~~~i~~~~~s~~-~~  288 (444)
                      ++.+ .....+++.+...++++.+..              ..++++|-++ .+.++..+  .  -.-.|.++.|..+ +.
T Consensus       711 vpl~-~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nT-f~vl~~hef~~~E~~~Si~s~~~~~d~~t  788 (1096)
T KOG1897|consen  711 VPLG-ESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNT-FEVLSSHEFERNETALSIISCKFTDDPNT  788 (1096)
T ss_pred             ecCC-CChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCc-eeEEeeccccccceeeeeeeeeecCCCce
Confidence            4443 345778887754444443321              1367777666 54443332  1  1124556678776 56


Q ss_pred             EEEEEEC----------CCcEEEEEcCCCceEE---EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         289 LILSVSL----------DRHFRVHDFHSKKLLR---KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       289 ~l~s~~~----------dg~i~vw~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ++++|+.          .|.|.||.+..++.+.   ....++.+.++..-          +++++|.  -...|++++..
T Consensus       789 ~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f----------ngkllA~--In~~vrLye~t  856 (1096)
T KOG1897|consen  789 YYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF----------NGKLLAG--INQSVRLYEWT  856 (1096)
T ss_pred             EEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh----------CCeEEEe--cCcEEEEEEcc
Confidence            7777762          5889999887733322   23355555555321          2345544  44567887776


Q ss_pred             ccccc
Q psy8152         356 HFEMN  360 (444)
Q Consensus       356 ~~~~~  360 (444)
                      ..+..
T Consensus       857 ~~~eL  861 (1096)
T KOG1897|consen  857 TEREL  861 (1096)
T ss_pred             cccee
Confidence            65433

>KOG2079|consensus

Probab=97.70  E-value=0.00017  Score=71.20  Aligned_cols=102  Identities=10%  Similarity=0.124  Sum_probs=78.4

Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                      .+..++.|+..|.+-..|+.  ++..+...-....++|++++|+.+|++++.|-.+|.|.+||+.+ +++++.+..|..+
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~--~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~-~k~l~~i~e~~ap  174 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMT--GNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHR-AKILKVITEHGAP  174 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhh--cccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccC-CcceeeeeecCCc
Confidence            34678899999999999988  23333333334567899999999999999999999999999999 9999998877766


Q ss_pred             eeEEE---ecCCCCEEEEEECCCcEEEEEc
Q psy8152         278 VKDIA---CPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       278 i~~~~---~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+++-   +..++..++++...|.  +|.+
T Consensus       175 ~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  175 VTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             cceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            66553   3345567888777776  4543

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.70  E-value=0.006  Score=44.27  Aligned_cols=100  Identities=12%  Similarity=0.155  Sum_probs=68.4

Q ss_pred             eeEEEEec---CC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC
Q psy8152         190 VNGISFLP---NS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG  265 (444)
Q Consensus       190 i~~~~~~~---~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  265 (444)
                      |++|++..   +| +.|++|+.|..||+|+-.     ..+..+... ..|++++-... ..++.+..+|+|-+|+-.   
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-----e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~---   71 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-----EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRS---   71 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-----cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCc---
Confidence            55666553   34 789999999999999854     555656544 44677766655 568889999999999753   


Q ss_pred             cceeEeccccCceeEEEec-CC--C-CEEEEEECCCcEE
Q psy8152         266 KPCYKYKGFAGCVKDIACP-LN--E-NLILSVSLDRHFR  300 (444)
Q Consensus       266 ~~~~~~~~h~~~i~~~~~s-~~--~-~~l~s~~~dg~i~  300 (444)
                      ..+..++. +..++++++. .+  | +-|++|-.+|.|-
T Consensus        72 ~RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   72 QRLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             ceeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            34455553 2335666553 33  3 4788998888774

>KOG2395|consensus

Probab=97.68  E-value=0.0016  Score=59.67  Aligned_cols=144  Identities=10%  Similarity=0.133  Sum_probs=95.8

Q ss_pred             cCCcEEEE-EEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCe-------EEEEecCCcEEEEEcCCCCc--ccc
Q psy8152          53 VEESELLI-AYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC-------ILTAVKSGDVKLWRYKTEPD--QWT  122 (444)
Q Consensus        53 ~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~-------l~~~~~dg~i~iw~~~~~~~--~~~  122 (444)
                      .+.++|+. +.....++-.|++.|+.+.....+. ..++..+.|+.+.       -+.|-.+..|+-||.+-...  +..
T Consensus       343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~-di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~  421 (644)
T KOG2395|consen  343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFED-DINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV  421 (644)
T ss_pred             cccceEeeCCCCcCcceeeecccceeeeEeeccC-CcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence            45555554 5556778888999999999887543 3466777665432       34466788899999763222  111


Q ss_pred             cccc----CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         123 NFNV----GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       123 ~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      ...|    .....|++-..+ .++++|+.+|.|++||--..+....+++.+.                  +|..|..+.+
T Consensus       422 ~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~------------------~I~hVdvtad  482 (644)
T KOG2395|consen  422 VQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGD------------------AIKHVDVTAD  482 (644)
T ss_pred             eeccccccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCC------------------ceeeEEeecc
Confidence            1112    334455555544 4899999999999999733333344555565                  7999999999


Q ss_pred             CCEEEEEeCCceEEEEEcC
Q psy8152         199 SDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~  217 (444)
                      |++|+..+ +.++.+.++.
T Consensus       483 GKwil~Tc-~tyLlLi~t~  500 (644)
T KOG2395|consen  483 GKWILATC-KTYLLLIDTL  500 (644)
T ss_pred             CcEEEEec-ccEEEEEEEe
Confidence            99887544 5577777765

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.67  E-value=0.034  Score=49.47  Aligned_cols=215  Identities=8%  Similarity=0.005  Sum_probs=117.9

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      ..+++--..+.|.-|+..+++.     ..+   .+.+.+.++..- ..+..|+++..  .+.+++.+++.....+.....
T Consensus        38 ~L~w~DI~~~~i~r~~~~~g~~-----~~~---~~p~~~~~~~~~-d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~  106 (307)
T COG3386          38 ALLWVDILGGRIHRLDPETGKK-----RVF---PSPGGFSSGALI-DAGGRLIACEH--GVRLLDPDTGGKITLLAEPED  106 (307)
T ss_pred             EEEEEeCCCCeEEEecCCcCce-----EEE---ECCCCcccceee-cCCCeEEEEcc--ccEEEeccCCceeEEeccccC
Confidence            3566666777777787766652     222   234555666555 34556665543  466667665555322211111


Q ss_pred             ccc-----EEEEEeCCCeEEEEec---------CCcEEEEEcC-CCCccccccccCCCeEEEEEeccCCEEEEeeC-CCe
Q psy8152          87 EGD-----IVGVSRYDECILTAVK---------SGDVKLWRYK-TEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-END  150 (444)
Q Consensus        87 ~~~-----v~~~s~~~~~l~~~~~---------dg~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~  150 (444)
                      ..+     -..+.|+|.+.++...         ...=.+|.+. .+..+.....+-..-+.|+|+|+++.|+.+.. .+.
T Consensus       107 ~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~  186 (307)
T COG3386         107 GLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR  186 (307)
T ss_pred             CCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCe
Confidence            111     1234577776554433         1112455555 45555444445566789999999987776654 477


Q ss_pred             EEEEEcCC--ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-eEEEEEcCCCCCccceEE
Q psy8152         151 LKLWDLNT--TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-YVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       151 i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~  227 (444)
                      |.-|++..  +.....     ........        .++..-.++...+|.+.+++...| .|.+|+..    ++.+..
T Consensus       187 i~r~~~d~~~g~~~~~-----~~~~~~~~--------~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd----G~l~~~  249 (307)
T COG3386         187 IHRYDLDPATGPIGGR-----RGFVDFDE--------EPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD----GKLLGE  249 (307)
T ss_pred             EEEEecCcccCccCCc-----ceEEEccC--------CCCCCCceEEeCCCCEEEecccCCceEEEECCC----CcEEEE
Confidence            88887763  111000     00000000        011344567777777775555544 89999877    667777


Q ss_pred             EeCCCCCeeEEEEc-cCCCEEEE
Q psy8152         228 VDIPDVALSCITTT-NQSHYVIV  249 (444)
Q Consensus       228 ~~~~~~~i~~~~~~-~~~~~l~~  249 (444)
                      +......+++++|- |+.+.|++
T Consensus       250 i~lP~~~~t~~~FgG~~~~~L~i  272 (307)
T COG3386         250 IKLPVKRPTNPAFGGPDLNTLYI  272 (307)
T ss_pred             EECCCCCCccceEeCCCcCEEEE
Confidence            77666778888885 33444444

>KOG2079|consensus

Probab=97.62  E-value=0.0048  Score=61.57  Aligned_cols=113  Identities=12%  Similarity=0.145  Sum_probs=80.0

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeee
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK  166 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~  166 (444)
                      ..+.+....+..++.|+..|.|...|+...-. ...-....++|++++|+.+|.+++.|-.+|.|.+||+.+++.++.+.
T Consensus        90 ~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~  169 (1206)
T KOG2079|consen   90 AGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT  169 (1206)
T ss_pred             cceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence            33444445667789999999999988765322 11233357899999999999999999999999999999998888777


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      .+...               ...|..+.+..++..++++..-|.  +|.+.
T Consensus       170 e~~ap---------------~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  170 EHGAP---------------VTGVIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             ecCCc---------------cceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            66650               112333444455566777777676  55554

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.60  E-value=0.058  Score=51.01  Aligned_cols=203  Identities=14%  Similarity=0.147  Sum_probs=106.7

Q ss_pred             EEEEeCCCeEEEE-ecCC----cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC-----------eEEEE
Q psy8152          91 VGVSRYDECILTA-VKSG----DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN-----------DLKLW  154 (444)
Q Consensus        91 ~~~s~~~~~l~~~-~~dg----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~vw  154 (444)
                      ..++|+++++|.+ +..|    .|+++|+.+++.+...+... ....+.|.++++.|+....+.           .|+.|
T Consensus       129 ~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~  207 (414)
T PF02897_consen  129 FSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRH  207 (414)
T ss_dssp             EEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEE
T ss_pred             eeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEE
Confidence            4568999987765 3334    49999999997764222221 123499999887776654332           37777


Q ss_pred             EcCCcee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC---C-ceEEEEEcCCCC--CccceE
Q psy8152         155 DLNTTKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK---Q-GYVRVYDPKITT--QRRPVL  226 (444)
Q Consensus       155 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d-~~i~i~d~~~~~--~~~~~~  226 (444)
                      .+.+...  ...+.....                ..+...+..++++++|+....   + ..+.+.++. ..  ......
T Consensus       208 ~~gt~~~~d~lvfe~~~~----------------~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~-~~~~~~~~~~  270 (414)
T PF02897_consen  208 KLGTPQSEDELVFEEPDE----------------PFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLD-DGGSPDAKPK  270 (414)
T ss_dssp             ETTS-GGG-EEEEC-TTC----------------TTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECC-CTTTSS-SEE
T ss_pred             ECCCChHhCeeEEeecCC----------------CcEEEEEEecCcccEEEEEEEccccCCeEEEEecc-ccCCCcCCcE
Confidence            7776432  122222222                112567888999988775422   3 467888887 11  122333


Q ss_pred             EEeCCCCCeeEEEEccCCCEEEEE---cCCCcEEEEEcCCCCcc---eeEeccccC--ceeEEEecCCCC-EEEEEECCC
Q psy8152         227 KVDIPDVALSCITTTNQSHYVIVG---STTGDMMAVDLRGKGKP---CYKYKGFAG--CVKDIACPLNEN-LILSVSLDR  297 (444)
Q Consensus       227 ~~~~~~~~i~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~~---~~~~~~h~~--~i~~~~~s~~~~-~l~s~~~dg  297 (444)
                      .+......+....-+..+.+++..   ...+.|...++.. ...   ...+..|..  .+..+..  .+. +++....++
T Consensus       271 ~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~-~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~  347 (414)
T PF02897_consen  271 LLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLAD-PSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENG  347 (414)
T ss_dssp             EEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTS-TSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETT
T ss_pred             EEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccc-cccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECC
Confidence            333333334333333344444433   3345677777777 432   224445555  3454444  344 444444444


Q ss_pred             --cEEEEEcCCCceEEEee
Q psy8152         298 --HFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       298 --~i~vw~~~~~~~~~~~~  314 (444)
                        .|+++++..+.....+.
T Consensus       348 ~~~l~v~~~~~~~~~~~~~  366 (414)
T PF02897_consen  348 SSRLRVYDLDDGKESREIP  366 (414)
T ss_dssp             EEEEEEEETT-TEEEEEEE
T ss_pred             ccEEEEEECCCCcEEeeec
Confidence              48889998444444444

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.58  E-value=0.056  Score=49.40  Aligned_cols=225  Identities=13%  Similarity=0.104  Sum_probs=100.0

Q ss_pred             CCcEEEEEE-cCCeEEEEeCCCC----ccccceee---cc---ccccEE-EEEeCCCeEEEEec------CCcEEEEEcC
Q psy8152          54 EESELLIAY-SGQKIKIYDTDFK----NFNTNTDV---SF---GEGDIV-GVSRYDECILTAVK------SGDVKLWRYK  115 (444)
Q Consensus        54 ~~~~l~~~~-~d~~i~vw~~~~~----~~~~~~~~---~~---~~~~v~-~~s~~~~~l~~~~~------dg~i~iw~~~  115 (444)
                      ..++|+..+ ..+.|+|.|+.+.    ++.+.+.-   ..   -..+-+ ..-|+|+.++++-.      -|-+.++|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            456777766 5689999998743    23333221   00   011111 11367888877532      2457777877


Q ss_pred             CCCccccccc---cCCCeEEEEEeccCCEEEEeeC--------------------CCeEEEEEcCCceeeeeeeccccee
Q psy8152         116 TEPDQWTNFN---VGPQLECMKHNKHSNIIATGGK--------------------ENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus       116 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~--------------------d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      +.+.......   ....-+.+.|.|..+.++|...                    ..++++||+.+.+.++++...... 
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g-  244 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEG-  244 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTE-
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCC-
Confidence            6655542222   1233567778887777777542                    368999999999999888665431 


Q ss_pred             eEeeeCCCcccccCccceeEEEEecC--CCE-EEEEeCCceEEEEEcCCCCCc--cceEEEeCC----------------
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPN--SDK-VAVCSKQGYVRVYDPKITTQR--RPVLKVDIP----------------  231 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~-l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~----------------  231 (444)
                                     ..+..|.|..+  ..+ ++.+...++|..|-....+..  +.+..+...                
T Consensus       245 ---------------~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~  309 (461)
T PF05694_consen  245 ---------------QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGA  309 (461)
T ss_dssp             ---------------EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-E
T ss_pred             ---------------CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccccccccccccc
Confidence                           12445666533  332 333334555555543211111  122222111                


Q ss_pred             -CCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEe--c-c---------------ccCceeEEEecCCCCEEE
Q psy8152         232 -DVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKY--K-G---------------FAGCVKDIACPLNENLIL  291 (444)
Q Consensus       232 -~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~--~-~---------------h~~~i~~~~~s~~~~~l~  291 (444)
                       ..-|+.|.+|.|.++|+. +-..|.|+.||+..+.++...-  . +               -.+...-+..|.||++|+
T Consensus       310 ~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlY  389 (461)
T PF05694_consen  310 VPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLY  389 (461)
T ss_dssp             E------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEE
T ss_pred             CCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEE
Confidence             234789999999999876 5678999999998754443322  1 1               011235567788887666


Q ss_pred             EEE
Q psy8152         292 SVS  294 (444)
Q Consensus       292 s~~  294 (444)
                      ..+
T Consensus       390 vTn  392 (461)
T PF05694_consen  390 VTN  392 (461)
T ss_dssp             EE-
T ss_pred             EEe
Confidence            544

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>smart00320 WD40 WD40 repeats

Probab=97.52  E-value=0.00029  Score=40.38  Aligned_cols=38  Identities=11%  Similarity=0.161  Sum_probs=33.3

Q ss_pred             cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         223 RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       223 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      .++..+..|...|.++.|+|.+.++++++.++.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            45566777888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.40  E-value=0.064  Score=54.08  Aligned_cols=211  Identities=11%  Similarity=0.058  Sum_probs=118.7

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccc------cEEEEE------------------eCCCeEEEEecCCcEE
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG------DIVGVS------------------RYDECILTAVKSGDVK  110 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~------~v~~~s------------------~~~~~l~~~~~dg~i~  110 (444)
                      +..|+.++.++.|.-.|..+|+.+-.+.......      .+..++                  ..+..++.++.|+.|.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            5678888888999999999999887765322111      011111                  1244788899999999


Q ss_pred             EEEcCCCCccccccccCCCe-------------EEEEEec--cCCEEEEeeC----------CCeEEEEEcCCceeeeee
Q psy8152         111 LWRYKTEPDQWTNFNVGPQL-------------ECMKHNK--HSNIIATGGK----------ENDLKLWDLNTTKNIFSA  165 (444)
Q Consensus       111 iw~~~~~~~~~~~~~~~~~v-------------~~~~~~~--~~~~l~~~~~----------d~~i~vwd~~~~~~~~~~  165 (444)
                      -.|.++|+..+.+ ...+.|             ..+.-.|  .+..+++|+.          .|.|+-+|.++|+.+..+
T Consensus       274 ALDA~TGk~~W~f-g~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       274 ALDADTGKLCEDF-GNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEECCCCCEEEEe-cCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            9999999988633 222222             1112223  3456666643          688999999999999877


Q ss_pred             ecccceeeEeeeCCCccccc-Cccce-eEEEEecCCCEEEEEe------------------CCceEEEEEcCCCCCccce
Q psy8152         166 KNVSHRVLVYSVKPDEFDLR-RPVWV-NGISFLPNSDKVAVCS------------------KQGYVRVYDPKITTQRRPV  225 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~-~~~~i-~~~~~~~~~~~l~~~~------------------~d~~i~i~d~~~~~~~~~~  225 (444)
                      .........  ..+.+.... -...+ ..+++.|...+++.+.                  ..+.|.-.|..   +++..
T Consensus       353 ~~g~p~~~~--~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~---TGk~~  427 (764)
T TIGR03074       353 DPGNPDPTA--PPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDAT---TGKER  427 (764)
T ss_pred             ecCCCCccc--CCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCC---CCceE
Confidence            532110000  000000000 00001 1223333333333221                  13456666766   56666


Q ss_pred             EEEeCCCCC---------eeEEEEcc-CCC---EEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         226 LKVDIPDVA---------LSCITTTN-QSH---YVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       226 ~~~~~~~~~---------i~~~~~~~-~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      ..++.....         ..-+.+.. +|+   .++.++.+|.++++|.++ ++++...+
T Consensus       428 W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~t-G~~l~~~~  486 (764)
T TIGR03074       428 WVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRT-GEPIVPVE  486 (764)
T ss_pred             EEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCC-CCEEeece
Confidence            655531111         11122322 453   788899999999999999 88887643

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.39  E-value=0.04  Score=53.96  Aligned_cols=191  Identities=10%  Similarity=0.031  Sum_probs=97.7

Q ss_pred             EEEEEeCCCeEEEEe------cCC--cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCe-EEEEEcCCce
Q psy8152          90 IVGVSRYDECILTAV------KSG--DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEND-LKLWDLNTTK  160 (444)
Q Consensus        90 v~~~s~~~~~l~~~~------~dg--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~vwd~~~~~  160 (444)
                      -.+++|+|+.++...      .+.  .|.+++.. +.... +.. ....+.-.|+|+|..|++...... +++.+-....
T Consensus       354 spaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~-lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g  430 (591)
T PRK13616        354 SAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQ-VLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATG  430 (591)
T ss_pred             cceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Cccee-eec-CCCCCCceECCCCCceEEEecCcceEEEeccCCCc
Confidence            346789999877655      243  34444542 22222 222 234788899999888887764322 3333222211


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc-ce---EEEeC-CCCCe
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR-PV---LKVDI-PDVAL  235 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~---~~~~~-~~~~i  235 (444)
                      .++.+.....          .........|..+.|+|+|..|+... ++.|++--+.....+. .+   ..+.. -...+
T Consensus       431 ql~~~~vd~g----------e~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~  499 (591)
T PRK13616        431 QLARTPVDAS----------AVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTA  499 (591)
T ss_pred             eEEEEeccCc----------hhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence            2221111111          00001123599999999998887665 4677773322111221 11   11222 22335


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--ccCceeEEEecCCCCEEEEEECCC
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--FAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      ..+.|.+++.++ ++..++...+|.+.-.+.....+.+  ...++..|+-++.  .|+....++
T Consensus       500 ~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g  560 (591)
T PRK13616        500 VSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARA  560 (591)
T ss_pred             ccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCc
Confidence            789999998755 5555554555654431222222232  2556777776653  344555555

>PHA03098 kelch-like protein; Provisional

Probab=97.39  E-value=0.018  Score=56.45  Aligned_cols=187  Identities=14%  Similarity=0.158  Sum_probs=92.0

Q ss_pred             CCcEEEEEEcC------CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCcccc
Q psy8152          54 EESELLIAYSG------QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWT  122 (444)
Q Consensus        54 ~~~~l~~~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~  122 (444)
                      ++..++.|+.+      ..+..||..+.+....-..+...........++.+++.|+.+     ..+..||..+.+... 
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-  372 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE-  372 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceee-
Confidence            35666666653      257788887766543322221122222334567777888765     347778877655332 


Q ss_pred             ccc--cCCCeEEEEEeccCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         123 NFN--VGPQLECMKHNKHSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       123 ~~~--~~~~v~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ...  +...-.+++ .-++++++.||..      +.+..||+.+.+-...-.....                 ..-.+++
T Consensus       373 ~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-----------------r~~~~~~  434 (534)
T PHA03098        373 EPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPIS-----------------HYGGCAI  434 (534)
T ss_pred             CCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcc-----------------ccCceEE
Confidence            111  111111222 2266777777732      3577888776443211100000                 0011222


Q ss_pred             EecCCCEEEEEeCC--------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEc
Q psy8152         195 FLPNSDKVAVCSKQ--------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDL  261 (444)
Q Consensus       195 ~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~  261 (444)
                      . .++.+++.|+..        ..+.+||.. ......+..+.........+.+  ++++++.|+.+     +.+.+||+
T Consensus       435 ~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~  510 (534)
T PHA03098        435 Y-HDGKIYVIGGISYIDNIKVYNIVESYNPV-TNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDD  510 (534)
T ss_pred             E-ECCEEEEECCccCCCCCcccceEEEecCC-CCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeC
Confidence            2 345666666643        238888887 3333333222211111122222  56677777654     46788887


Q ss_pred             CC
Q psy8152         262 RG  263 (444)
Q Consensus       262 ~~  263 (444)
                      .+
T Consensus       511 ~~  512 (534)
T PHA03098        511 KT  512 (534)
T ss_pred             CC
Confidence            76

>PHA03098 kelch-like protein; Provisional

Probab=97.38  E-value=0.019  Score=56.33  Aligned_cols=146  Identities=10%  Similarity=0.048  Sum_probs=72.2

Q ss_pred             cccEEEecCCC------cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCCC
Q psy8152           6 DYNIYIGSSTG------AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTDF   74 (444)
Q Consensus         6 ~~~l~~g~~dg------~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~   74 (444)
                      +..++.|+.++      .+..|+..+.+.     ..+..+.....-.+++..  ++..++.|+.+     ..+..||..+
T Consensus       295 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-----~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~  367 (534)
T PHA03098        295 NVIYFIGGMNKNNLSVNSVVSYDTKTKSW-----NKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGE  367 (534)
T ss_pred             CEEEEECCCcCCCCeeccEEEEeCCCCee-----eECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCC
Confidence            44566666432      466777766652     222222111111222222  46677777764     3577888877


Q ss_pred             CccccceeeccccccEEEEEeCCCeEEEEecC------CcEEEEEcCCCCccccccccCCC--eEEEEEeccCCEEEEee
Q psy8152          75 KNFNTNTDVSFGEGDIVGVSRYDECILTAVKS------GDVKLWRYKTEPDQWTNFNVGPQ--LECMKHNKHSNIIATGG  146 (444)
Q Consensus        75 ~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~  146 (444)
                      .+....-..+...........++++++.|+..      ..+..||+.+.+... ....+.+  -.+++ ..++.+++.|+
T Consensus       368 ~~W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~-~~~~~iyv~GG  445 (534)
T PHA03098        368 SKWREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSK-GSPLPISHYGGCAI-YHDGKIYVIGG  445 (534)
T ss_pred             CceeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeee-cCCCCccccCceEE-EECCEEEEECC
Confidence            65543322211111122234567777777632      457888887654432 1111111  11222 22566777776


Q ss_pred             CCC--------eEEEEEcCCce
Q psy8152         147 KEN--------DLKLWDLNTTK  160 (444)
Q Consensus       147 ~d~--------~i~vwd~~~~~  160 (444)
                      ..+        .+.+||..+++
T Consensus       446 ~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        446 ISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             ccCCCCCcccceEEEecCCCCc
Confidence            432        37778877654

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.34  E-value=0.013  Score=57.32  Aligned_cols=149  Identities=11%  Similarity=0.044  Sum_probs=83.2

Q ss_pred             CCCeEEEEEeccCCEEEEee------CCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         127 GPQLECMKHNKHSNIIATGG------KEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       127 ~~~v~~~~~~~~~~~l~~~~------~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      ...+...+++|+++.++..-      .+.  .|.+++... .. ..+.. ..                  ..+.-.|+|+
T Consensus       349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~-~~lt~-g~------------------~~t~PsWspD  407 (591)
T PRK13616        349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VA-VQVLE-GH------------------SLTRPSWSLD  407 (591)
T ss_pred             ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-cc-eeeec-CC------------------CCCCceECCC
Confidence            34678899999999887665      233  444445422 22 22211 11                  2566788998


Q ss_pred             CCEEEEEeCC------------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEE---EEcCC
Q psy8152         199 SDKVAVCSKQ------------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMA---VDLRG  263 (444)
Q Consensus       199 ~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i---wd~~~  263 (444)
                      |..|++....            +.+.+.++.   ......   .....|..+.|||+|..|+... ++.|++   -....
T Consensus       408 G~~lw~v~dg~~~~~v~~~~~~gql~~~~vd---~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~  480 (591)
T PRK13616        408 ADAVWVVVDGNTVVRVIRDPATGQLARTPVD---ASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTED  480 (591)
T ss_pred             CCceEEEecCcceEEEeccCCCceEEEEecc---Cchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCC
Confidence            8777665432            223222333   111111   2245699999999999888765 467777   33333


Q ss_pred             CCc-ce---eEec-cccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         264 KGK-PC---YKYK-GFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       264 ~~~-~~---~~~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                       +. .+   ..+. +-...+.++.|..++.++ .+..++...+|.+.
T Consensus       481 -G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~  525 (591)
T PRK13616        481 -GQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVN  525 (591)
T ss_pred             -CceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEe
Confidence             43 11   1122 223346889999888754 55555544555543

>KOG4499|consensus

Probab=97.22  E-value=0.092  Score=43.47  Aligned_cols=95  Identities=16%  Similarity=0.158  Sum_probs=66.5

Q ss_pred             eeEEEEecCCCE-EEEEeCCceEEEEEcC--CC--CCccceEEEeC----CCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         190 VNGISFLPNSDK-VAVCSKQGYVRVYDPK--IT--TQRRPVLKVDI----PDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       190 i~~~~~~~~~~~-l~~~~~d~~i~i~d~~--~~--~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      -+.++|+.+.+. .++-+.+-.|.-||..  +.  .+.+.+..++.    .....-.++....|++.++.-..++|..+|
T Consensus       160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d  239 (310)
T KOG4499|consen  160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD  239 (310)
T ss_pred             CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence            457888877644 4455677788778733  11  12334444432    111234566677899999998999999999


Q ss_pred             cCCCCcceeEeccccCceeEEEecC
Q psy8152         261 LRGKGKPCYKYKGFAGCVKDIACPL  285 (444)
Q Consensus       261 ~~~~~~~~~~~~~h~~~i~~~~~s~  285 (444)
                      +.+ ++.+.++.-....|++++|--
T Consensus       240 p~t-GK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  240 PTT-GKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             CCC-CcEEEEEEcCCCceEEEEecC
Confidence            999 999999998888999999963

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.17  E-value=0.13  Score=44.22  Aligned_cols=268  Identities=10%  Similarity=0.097  Sum_probs=150.5

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc---cee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT---NTD   82 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~---~~~   82 (444)
                      .++++++..+.-|+|.|+.+...+ ..+..+   .-.+--.++..+   +++..++..+.-+.+.|+.+.....   .+.
T Consensus        96 e~yvyvad~ssGL~IvDIS~P~sP-~~~~~l---nt~gyaygv~vs---Gn~aYVadlddgfLivdvsdpssP~lagrya  168 (370)
T COG5276          96 EEYVYVADWSSGLRIVDISTPDSP-TLIGFL---NTDGYAYGVYVS---GNYAYVADLDDGFLIVDVSDPSSPQLAGRYA  168 (370)
T ss_pred             ccEEEEEcCCCceEEEeccCCCCc-ceeccc---cCCceEEEEEec---CCEEEEeeccCcEEEEECCCCCCceeeeeec
Confidence            467788888888999999887752 112222   223455666666   8999999877777788887544322   222


Q ss_pred             eccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc---CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152          83 VSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV---GPQLECMKHNKHSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        83 ~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      ..  ......+.-.|++...+..++-+.+.|+...... .+.+|   ...+.++..+++..+++...  --+.+-|....
T Consensus       169 ~~--~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sP-vli~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~~  243 (370)
T COG5276         169 LP--GGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSP-VLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSGP  243 (370)
T ss_pred             cC--CCCceeEEEecCeEEEEEeCCCeEEEEccCCCCC-eEEEEEecCCceEEEEecCCeeEEEEcc--cceEEEecCCC
Confidence            11  2222455567888888899999999999876544 24443   33677777776655555443  34666676664


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT  239 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~  239 (444)
                      +....+.....              ..+..++.+..  .+++......+.-+.+-|+...........+......-..+.
T Consensus       244 ssp~~~gsyet--------------~~p~~~s~v~V--s~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~  307 (370)
T COG5276         244 SSPTVFGSYET--------------SNPVSISTVPV--SGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIR  307 (370)
T ss_pred             CCceEeecccc--------------CCcccccceec--ccceeeeeccccCceeEeccCCCCCchhccccCCCccccceE
Confidence            43332221111              00112332333  346666666677777778772111112222222222233343


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      .+  +.++..+..+ ...+.+... .+......+....+.+.+.+-+.+.+.+...++-+.||+..
T Consensus       308 ay--~~y~yiadkn-~g~vV~~s~-~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~~  369 (370)
T COG5276         308 AY--GNYNYIADKN-TGAVVDASP-PSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEYL  369 (370)
T ss_pred             Ee--cCeeEeccCC-ceEEEeCCC-hhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEec
Confidence            32  4555555544 455566554 33333333333333444444455688888888989998853

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.16  E-value=0.19  Score=46.07  Aligned_cols=238  Identities=12%  Similarity=0.052  Sum_probs=95.9

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecc--c------CcccceEEEeeeccCCcEEEEEEc------CCeEEEEeC
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY--I------TNKASVLALNWGNVEESELLIAYS------GQKIKIYDT   72 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~--~------~h~~~v~~~~~~~~~~~~l~~~~~------d~~i~vw~~   72 (444)
                      ..++-|-..+.|+|+|+.+.....+-.+.+..  +      .-...+.|+    |++..++++-.      -|.+.++|-
T Consensus        89 ~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hcl----p~G~imIS~lGd~~G~g~Ggf~llD~  164 (461)
T PF05694_consen   89 YLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCL----PDGRIMISALGDADGNGPGGFVLLDG  164 (461)
T ss_dssp             EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-----SS--EEEEEEEETTS-S--EEEEE-T
T ss_pred             cEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeec----CCccEEEEeccCCCCCCCCcEEEEcC
Confidence            44444558899999999865542222222221  0      011123333    67888888533      256778887


Q ss_pred             CCCccccceeeccc-cccEEEE--EeCCCeEEEEe--------------------cCCcEEEEEcCCCCcccccccc--C
Q psy8152          73 DFKNFNTNTDVSFG-EGDIVGV--SRYDECILTAV--------------------KSGDVKLWRYKTEPDQWTNFNV--G  127 (444)
Q Consensus        73 ~~~~~~~~~~~~~~-~~~v~~~--s~~~~~l~~~~--------------------~dg~i~iw~~~~~~~~~~~~~~--~  127 (444)
                      ++.+.......... ...-..|  .|..+.++|..                    ...++.+||+.+.+.++.+---  .
T Consensus       165 ~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g  244 (461)
T PF05694_consen  165 ETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEG  244 (461)
T ss_dssp             TT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTE
T ss_pred             ccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCC
Confidence            76665555432211 1111222  34445555542                    3467999999999888633221  1


Q ss_pred             CCeEEEEEec--cCCEEEEee-CCCeEEEEEc-CCce----eeeeeecccceeeEeeeCCCc--ccccCccceeEEEEec
Q psy8152         128 PQLECMKHNK--HSNIIATGG-KENDLKLWDL-NTTK----NIFSAKNVSHRVLVYSVKPDE--FDLRRPVWVNGISFLP  197 (444)
Q Consensus       128 ~~v~~~~~~~--~~~~l~~~~-~d~~i~vwd~-~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~  197 (444)
                      .....+.|..  ...+-++++ ...+|..|-- ..++    .+..+....  +..+.+ |.-  -....+.-|+.|..|.
T Consensus       245 ~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~--v~~~~l-p~ml~~~~~~P~LitDI~iSl  321 (461)
T PF05694_consen  245 QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKK--VEGWIL-PEMLKPFGAVPPLITDILISL  321 (461)
T ss_dssp             EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE----SS----GGGGGG-EE------EEE-T
T ss_pred             CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcc--cCcccc-cccccccccCCCceEeEEEcc
Confidence            3466777765  333333333 3344444433 3332    111111110  000000 000  0011234589999999


Q ss_pred             CCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCC----------------CCCeeEEEEccCCCEEEEEc
Q psy8152         198 NSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIP----------------DVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       198 ~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~  251 (444)
                      |.++|.++ =..|.|+.||+......+.+.++...                .+...-|.+|.+|+.|+..+
T Consensus       322 DDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  322 DDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             TS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             CCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence            99888655 45899999999833334444433211                11224566777777776653

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=97.12  E-value=0.22  Score=46.15  Aligned_cols=81  Identities=11%  Similarity=0.116  Sum_probs=59.1

Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec----CC----------------CC-E
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP----LN----------------EN-L  289 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s----~~----------------~~-~  289 (444)
                      ....+.+++.+|.+++.++...-|.|.++|+.+ +..++.++|....=  +.|-    +.                .. +
T Consensus       306 ~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~-~~vvrmWKGYRdAq--c~wi~~~~~~~~~~~~~~~~~~~~~~~l~L  382 (415)
T PF14655_consen  306 SKREGESICLSPSGRLAAVTDSLGRVLLIDVAR-GIVVRMWKGYRDAQ--CGWIEVPEEGDRDRSNSNSPKSSSRFALFL  382 (415)
T ss_pred             CCceEEEEEECCCCCEEEEEcCCCcEEEEECCC-ChhhhhhccCccce--EEEEEeecccccccccccccCCCCcceEEE
Confidence            345578899999999999988889999999999 98888888754321  1111    10                11 2


Q ss_pred             EEEEECCCcEEEEEcCCCceEEEee
Q psy8152         290 ILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      ++-+-.-|.|-||.++.|..+..+.
T Consensus       383 vIyaprRg~lEvW~~~~g~Rv~a~~  407 (415)
T PF14655_consen  383 VIYAPRRGILEVWSMRQGPRVAAFN  407 (415)
T ss_pred             EEEeccCCeEEEEecCCCCEEEEEE
Confidence            3345668899999999988877654

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.11  E-value=0.18  Score=44.72  Aligned_cols=226  Identities=13%  Similarity=0.166  Sum_probs=104.8

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee----ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV----SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      ...+|.|. . ...+++| ..+. .+.....|+.-..+..    ++....+..+  ....+..++..|.|  |....+-.
T Consensus        63 ~l~~I~f~-~-~~g~ivG-~~g~-ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l--~~~~~~l~~~~G~i--y~T~DgG~  134 (302)
T PF14870_consen   63 HLNSISFD-G-NEGWIVG-EPGL-LLHTTDGGKTWERVPLSSKLPGSPFGITAL--GDGSAELAGDRGAI--YRTTDGGK  134 (302)
T ss_dssp             EEEEEEEE-T-TEEEEEE-ETTE-EEEESSTTSS-EE----TT-SS-EEEEEEE--ETTEEEEEETT--E--EEESSTTS
T ss_pred             eEEEEEec-C-CceEEEc-CCce-EEEecCCCCCcEEeecCCCCCCCeeEEEEc--CCCcEEEEcCCCcE--EEeCCCCC
Confidence            46677787 3 3444444 4453 3444444443333221    1212222222  23344444555554  44333322


Q ss_pred             cc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         120 QW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       120 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .+  ....-...+..+..++++.+++++..-..+.-|+.-...-...-+....                  .|.+|.|.|
T Consensus       135 tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~------------------riq~~gf~~  196 (302)
T PF14870_consen  135 TWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSR------------------RIQSMGFSP  196 (302)
T ss_dssp             SEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-------------------EEEEEE-T
T ss_pred             CeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccc------------------eehhceecC
Confidence            22  2233456788888899999999988766667777543211111111122                  599999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccc----eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRP----VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-  272 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-  272 (444)
                      ++.+.+++ ..|.|++=+..  .....    +..+......+..++|.+++...++|+. |.+ +..... ++.-...+ 
T Consensus       197 ~~~lw~~~-~Gg~~~~s~~~--~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~Dg-GktW~~~~~  270 (302)
T PF14870_consen  197 DGNLWMLA-RGGQIQFSDDP--DDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDG-GKTWQKDRV  270 (302)
T ss_dssp             TS-EEEEE-TTTEEEEEE-T--TEEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESST-TSS-EE-GG
T ss_pred             CCCEEEEe-CCcEEEEccCC--CCccccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCC-CccceECcc
Confidence            98766644 88888887722  01111    1111123344788999988777776654 444 344444 55544443 


Q ss_pred             --cccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         273 --GFAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       273 --~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                        .-...++.|.|.+..+-+ ..+.+|.|.-|
T Consensus       271 ~~~~~~n~~~i~f~~~~~gf-~lG~~G~ll~~  301 (302)
T PF14870_consen  271 GENVPSNLYRIVFVNPDKGF-VLGQDGVLLRY  301 (302)
T ss_dssp             GTTSSS---EEEEEETTEEE-EE-STTEEEEE
T ss_pred             ccCCCCceEEEEEcCCCceE-EECCCcEEEEe
Confidence              224567888887554444 44678877555

>KOG4499|consensus

Probab=97.09  E-value=0.13  Score=42.72  Aligned_cols=210  Identities=12%  Similarity=0.057  Sum_probs=109.7

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccC---CEEEEeeCCCeEEEEEcCC--ceeeeeeecccce
Q psy8152          97 DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS---NIIATGGKENDLKLWDLNT--TKNIFSAKNVSHR  171 (444)
Q Consensus        97 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~  171 (444)
                      +.++.+--..+.|+-||+.+.+..+.... ..+..++.+--.+   .+.+.++..-.|.-||...  .....++..    
T Consensus        27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie-~p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~e----  101 (310)
T KOG4499|consen   27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIE-GPPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFE----  101 (310)
T ss_pred             ceEEEEEeccCceehhhhhhhheEEEEEe-cCcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccc----
Confidence            34555555667777788877655432221 1223333332222   2333333333445566432  222222111    


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                           +.|+..    ....+.-..+|+|++++ |..          .|.++.|-..  .+...+   ...-.--+.++|+
T Consensus       102 -----v~~d~k----knR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~--h~v~~i---~~~v~IsNgl~Wd  166 (310)
T KOG4499|consen  102 -----VQPDRK----KNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAG--HQVELI---WNCVGISNGLAWD  166 (310)
T ss_pred             -----cCchHH----hcccccCccCCCCceee-eeeccccccccccccEEEEeccC--CCceee---ehhccCCcccccc
Confidence                 111111    12355567788888844 322          2345555443  111111   1122223568888


Q ss_pred             cCCCEEEE-EcCCCcEEEEE--cCC----CCcceeEeccc----cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         242 NQSHYVIV-GSTTGDMMAVD--LRG----KGKPCYKYKGF----AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       242 ~~~~~l~~-~~~dg~i~iwd--~~~----~~~~~~~~~~h----~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                      .+.+.++. -+.+-.|.-||  ..+    ..+.+..++..    ....-.++....|++.++.-..++|...|..+|+.+
T Consensus       167 ~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L  246 (310)
T KOG4499|consen  167 SDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKIL  246 (310)
T ss_pred             ccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEE
Confidence            77665544 55566676677  433    02333333321    111223455667788888888899999999999999


Q ss_pred             EEee-cCCceeEEEEcC
Q psy8152         311 RKDY-MQSRLTSILVRS  326 (444)
Q Consensus       311 ~~~~-~~~~i~~~~~~~  326 (444)
                      ..+. ...+|++++|-.
T Consensus       247 ~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  247 LEIKLPTPQITSCCFGG  263 (310)
T ss_pred             EEEEcCCCceEEEEecC
Confidence            9987 556799999854

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.09  E-value=0.28  Score=49.64  Aligned_cols=207  Identities=13%  Similarity=0.066  Sum_probs=118.9

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCccccccccCC--------CeEEEEEec----------------cCCEEEEeeCCCeEE
Q psy8152          97 DECILTAVKSGDVKLWRYKTEPDQWTNFNVGP--------QLECMKHNK----------------HSNIIATGGKENDLK  152 (444)
Q Consensus        97 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--------~v~~~~~~~----------------~~~~l~~~~~d~~i~  152 (444)
                      +..|+.++.++.|.-.|..+++.++.+.....        ....+++..                .+..++.++.|+.|.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            56777788888999999999888774432211        012233321                344788889999999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec--CCCEEEEEeC----------CceEEEEEcCCCC
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSK----------QGYVRVYDPKITT  220 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~----------d~~i~i~d~~~~~  220 (444)
                      -.|..+|+.+..+..... +....--++.    .. .-..+.-.|  .+..+++|+.          .|.|+-+|.+   
T Consensus       274 ALDA~TGk~~W~fg~~G~-vdl~~~~g~~----~~-g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~---  344 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGT-VDLTAGMGTT----PP-GYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVN---  344 (764)
T ss_pred             EEECCCCCEEEEecCCCc-eeeecccCcC----CC-cccccccCCEEECCEEEEEecccccccccCCCcEEEEEECC---
Confidence            999999998877643221 1000000000    00 000011111  1234555532          6889999998   


Q ss_pred             CccceEEEeCC-----------------CCCe-eEEEEccCCCEEEEEc------------------CCCcEEEEEcCCC
Q psy8152         221 QRRPVLKVDIP-----------------DVAL-SCITTTNQSHYVIVGS------------------TTGDMMAVDLRGK  264 (444)
Q Consensus       221 ~~~~~~~~~~~-----------------~~~i-~~~~~~~~~~~l~~~~------------------~dg~i~iwd~~~~  264 (444)
                      +++.+..+...                 ...+ ..+++.|...+++.+.                  ..+.|.-.|+.+ 
T Consensus       345 TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~T-  423 (764)
T TIGR03074       345 TGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATT-  423 (764)
T ss_pred             CCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCC-
Confidence            66666655421                 0011 2344555444444322                  234567778888 


Q ss_pred             CcceeEecc-cc---------CceeEEEecC-CCC---EEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         265 GKPCYKYKG-FA---------GCVKDIACPL-NEN---LILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       265 ~~~~~~~~~-h~---------~~i~~~~~s~-~~~---~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      ++....++. |.         .++ -+.+.. +|+   .++.++.+|.++++|..+|+++....
T Consensus       424 Gk~~W~~Q~~~hD~WD~D~~~~p~-L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~  486 (764)
T TIGR03074       424 GKERWVFQTVHHDLWDMDVPAQPS-LVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE  486 (764)
T ss_pred             CceEEEecccCCccccccccCCce-EEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence            888887764 21         111 112222 553   88999999999999999999987654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.01  E-value=0.11  Score=45.15  Aligned_cols=147  Identities=14%  Similarity=0.056  Sum_probs=87.7

Q ss_pred             CeEEEEEeccCCEEEEee---CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         129 QLECMKHNKHSNIIATGG---KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       129 ~v~~~~~~~~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      .+.+.++++++..++...   ....++++...  ........ ..                  .+..-.|++++...++.
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~~-g~------------------~l~~PS~d~~g~~W~v~   83 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVLT-GG------------------SLTRPSWDPDGWVWTVD   83 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeecc-CC------------------ccccccccCCCCEEEEE
Confidence            688999999998777655   33345555433  22222211 11                  36777899998777776


Q ss_pred             eCCceEEEEE-cCCCCCccceEE-EeCCCCCeeEEEEccCCCEEEEEc---CCCcEEEEEcCCC--C------cceeEec
Q psy8152         206 SKQGYVRVYD-PKITTQRRPVLK-VDIPDVALSCITTTNQSHYVIVGS---TTGDMMAVDLRGK--G------KPCYKYK  272 (444)
Q Consensus       206 ~~d~~i~i~d-~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~--~------~~~~~~~  272 (444)
                      ..+...+++. .. ......+.. .......|+.+.+||+|..++...   ..+.|++--+...  +      .++....
T Consensus        84 ~~~~~~~~~~~~~-~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~  162 (253)
T PF10647_consen   84 DGSGGVRVVRDSA-SGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAP  162 (253)
T ss_pred             cCCCceEEEEecC-CCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecc
Confidence            6666667664 22 122222221 111112799999999999887644   3567777655421  2      1122222


Q ss_pred             cccCceeEEEecCCCCEEEEEECCC
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      .....++.+.|.+++.+++.+...+
T Consensus       163 ~~~~~v~~v~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  163 PLLSDVTDVAWSDDSTLVVLGRSAG  187 (253)
T ss_pred             cccCcceeeeecCCCEEEEEeCCCC
Confidence            3346889999999988776665443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.01  E-value=0.18  Score=43.11  Aligned_cols=196  Identities=10%  Similarity=0.086  Sum_probs=107.5

Q ss_pred             EEEEecCCc-EEEEEcCCCCccccccccCC--CeEEEEEeccCCEEEEeeC-----CCeEEEEEcCCc-eeeeeeecccc
Q psy8152         100 ILTAVKSGD-VKLWRYKTEPDQWTNFNVGP--QLECMKHNKHSNIIATGGK-----ENDLKLWDLNTT-KNIFSAKNVSH  170 (444)
Q Consensus       100 l~~~~~dg~-i~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~-----d~~i~vwd~~~~-~~~~~~~~~~~  170 (444)
                      ++.+-.-|+ ..++|....+....+....+  -.-.-.|+|+|.+|+..-.     -|.|-|||.+.+ +.+-.+..+.-
T Consensus        83 vafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~Gi  162 (366)
T COG3490          83 VAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGI  162 (366)
T ss_pred             EEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCc
Confidence            444444444 45677776654432221111  1112368999999887543     378999999853 34445555543


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC------------------CceEEEEEcCCCCCccceEEEe--C
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK------------------QGYVRVYDPKITTQRRPVLKVD--I  230 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------------d~~i~i~d~~~~~~~~~~~~~~--~  230 (444)
                                        ....+.|.+||+.|+.+..                  .-++.+.|.. ++......++.  .
T Consensus       163 ------------------GpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~a-tG~liekh~Lp~~l  223 (366)
T COG3490         163 ------------------GPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAA-TGNLIEKHTLPASL  223 (366)
T ss_pred             ------------------CcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEecc-ccchhhhccCchhh
Confidence                              4678899999988887643                  1123333322 11111112222  2


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCc----EEEEEcCCCCcceeEec-------cccCceeEEEecCCCCEEEEEE-CCCc
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGD----MMAVDLRGKGKPCYKYK-------GFAGCVKDIACPLNENLILSVS-LDRH  298 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~----i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~~~~~l~s~~-~dg~  298 (444)
                      +...|..+...++|..++.+-..|.    --+.-...+++++.-+.       .....|-+++.+....+++..+ ..+.
T Consensus       224 ~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~  303 (366)
T COG3490         224 RQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNR  303 (366)
T ss_pred             hhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCe
Confidence            3455777888888766655433221    11111111144444443       2335677888876555555544 4556


Q ss_pred             EEEEEcCCCceEEEee
Q psy8152         299 FRVHDFHSKKLLRKDY  314 (444)
Q Consensus       299 i~vw~~~~~~~~~~~~  314 (444)
                      ..+||..+|.++....
T Consensus       304 ~vi~da~tG~vv~~a~  319 (366)
T COG3490         304 AVIWDAATGAVVSEAA  319 (366)
T ss_pred             EEEEEcCCCcEEeccc
Confidence            7899999999876543

>KOG3630|consensus

Probab=96.96  E-value=0.01  Score=59.64  Aligned_cols=149  Identities=11%  Similarity=0.040  Sum_probs=93.1

Q ss_pred             CCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeee-----eeecccceeeEeeeCCCcccccCccceeEEEEecCC-
Q psy8152         128 PQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIF-----SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-  199 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  199 (444)
                      -+|..+...+++...++..  .+-.|..||++.-....     -+..+.-            .........++.|+|.- 
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~t------------s~ek~vf~~~~~wnP~vp  168 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSAT------------SFEKPVFQLKNVWNPLVP  168 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccc------------hhccccccccccccCCcc
Confidence            3455566666765554433  34478899998622111     1111110            00012246778898865 


Q ss_pred             CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc----cc
Q psy8152         200 DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG----FA  275 (444)
Q Consensus       200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----h~  275 (444)
                      ...+++..|+.|++..+.  .....+..+. .....++++|+|.|+.+++|-..|++.-|-..  .+....+.+    ..
T Consensus       169 ~n~av~l~dlsl~V~~~~--~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~--leik~~ip~Pp~~e~  243 (1405)
T KOG3630|consen  169 LNSAVDLSDLSLRVKSTK--QLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS--LEIKSEIPEPPVEEN  243 (1405)
T ss_pred             chhhhhccccchhhhhhh--hhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecc--cceeecccCCCcCCC
Confidence            456778889999999887  2223333332 34568999999999999999999999988755  333333332    24


Q ss_pred             CceeEEEecCCCCEEEEE
Q psy8152         276 GCVKDIACPLNENLILSV  293 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~  293 (444)
                      ..|.+|+|-....+|++-
T Consensus       244 yrvl~v~Wl~t~eflvvy  261 (1405)
T KOG3630|consen  244 YRVLSVTWLSTQEFLVVY  261 (1405)
T ss_pred             cceeEEEEecceeEEEEe
Confidence            689999998766666654

>PHA02790 Kelch-like protein; Provisional

Probab=96.96  E-value=0.08  Score=50.97  Aligned_cols=184  Identities=11%  Similarity=-0.011  Sum_probs=89.2

Q ss_pred             CcEEEEEEcC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC--CcEEEEEcCCCCccccccccC
Q psy8152          55 ESELLIAYSG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS--GDVKLWRYKTEPDQWTNFNVG  127 (444)
Q Consensus        55 ~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~  127 (444)
                      +..+++|+.+     ..+..||..+++....-..+...........++.+.+.|+.+  ..+..|+..+++... ...-.
T Consensus       272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~-~~~l~  350 (480)
T PHA02790        272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVN-MPSLL  350 (480)
T ss_pred             CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEE-CCCCC
Confidence            4556677654     357778887765443322221121222334577777777764  357778876554332 11111


Q ss_pred             CCeEEE-EEeccCCEEEEeeCCC---eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         128 PQLECM-KHNKHSNIIATGGKEN---DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       128 ~~v~~~-~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      .+.... ...-++++.+.||.++   .+..||..+.+-...-. ...                +..-.+++ .-++++.+
T Consensus       351 ~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~-m~~----------------~r~~~~~~-~~~~~IYv  412 (480)
T PHA02790        351 KPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPS-TYY----------------PHYKSCAL-VFGRRLFL  412 (480)
T ss_pred             CCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCC-CCC----------------ccccceEE-EECCEEEE
Confidence            111111 1122677778887653   35667776543222110 000                00011222 23456666


Q ss_pred             EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152         204 VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG  263 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  263 (444)
                      .|+   .+.+||.. +.....+..+.........+.+  +++..++|+.+     ..+..||..+
T Consensus       413 ~GG---~~e~ydp~-~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~~~~~~~~ve~Yd~~~  471 (480)
T PHA02790        413 VGR---NAEFYCES-SNTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFYRGSYIDTIEVYNNRT  471 (480)
T ss_pred             ECC---ceEEecCC-CCcEeEcCCCCCCccccEEEEE--CCEEEEECCcCCCcccceEEEEECCC
Confidence            663   56788887 4444433333322222222323  56777777754     3466666654

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.89  E-value=0.14  Score=43.76  Aligned_cols=205  Identities=11%  Similarity=0.096  Sum_probs=120.3

Q ss_pred             CeEEEEEec-cCCEEEEeeCCCe-EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe
Q psy8152         129 QLECMKHNK-HSNIIATGGKEND-LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS  206 (444)
Q Consensus       129 ~v~~~~~~~-~~~~l~~~~~d~~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  206 (444)
                      ....++|+| ...-++.+-.-|+ ..++|....+...++.....                +-..-.=.|||+|.+|...-
T Consensus        69 R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~----------------RHfyGHGvfs~dG~~LYATE  132 (366)
T COG3490          69 RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEG----------------RHFYGHGVFSPDGRLLYATE  132 (366)
T ss_pred             ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccC----------------ceeecccccCCCCcEEEeec
Confidence            344567777 4455566655554 45888888776655544333                11233346899999887653


Q ss_pred             C-----CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC------------------CCcEEEEEcCC
Q psy8152         207 K-----QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST------------------TGDMMAVDLRG  263 (444)
Q Consensus       207 ~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------------dg~i~iwd~~~  263 (444)
                      .     -|.|-|||.+  .....+-.+..|.-....+.|.+||+.|+.+..                  .-++.+.|..+
T Consensus       133 ndfd~~rGViGvYd~r--~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~at  210 (366)
T COG3490         133 NDFDPNRGVIGVYDAR--EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAAT  210 (366)
T ss_pred             CCCCCCCceEEEEecc--cccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccc
Confidence            3     4689999998  455667778888877889999999999887532                  12344555555


Q ss_pred             CCcceeE--ec--cccCceeEEEecCCCCEEEEEECCCc-----EEEEEcCCCceEEEee--------cCCceeEEEEcC
Q psy8152         264 KGKPCYK--YK--GFAGCVKDIACPLNENLILSVSLDRH-----FRVHDFHSKKLLRKDY--------MQSRLTSILVRS  326 (444)
Q Consensus       264 ~~~~~~~--~~--~h~~~i~~~~~s~~~~~l~s~~~dg~-----i~vw~~~~~~~~~~~~--------~~~~i~~~~~~~  326 (444)
                       +.++.+  ++  .+.-.|..++..++|..++.+-..|.     -.|=-...++.+.-+.        ...-|-+++...
T Consensus       211 -G~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~  289 (366)
T COG3490         211 -GNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANR  289 (366)
T ss_pred             -cchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecc
Confidence             555533  22  24456888888888776555433221     1111122233332222        122344454442


Q ss_pred             CCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         327 DFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       327 ~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      +        ++-..+|.-..+..-+||..++...
T Consensus       290 ~--------~glV~lTSP~GN~~vi~da~tG~vv  315 (366)
T COG3490         290 R--------DGLVALTSPRGNRAVIWDAATGAVV  315 (366)
T ss_pred             c--------CCeEEEecCCCCeEEEEEcCCCcEE
Confidence            2        1233445556677788998877654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.88  E-value=0.0046  Score=37.37  Aligned_cols=35  Identities=9%  Similarity=0.131  Sum_probs=30.2

Q ss_pred             cccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc
Q psy8152          41 NKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF   77 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~   77 (444)
                      ....|.+++|+ |..++||.|+.+|.|.||.+ +++.
T Consensus        10 l~~~v~~~~w~-P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   10 LPSRVSCMSWC-PTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCCcEEEEEEC-CCCCEEEEEECCCeEEEEEC-CCcC
Confidence            35679999999 79999999999999999998 4443

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.81  E-value=0.33  Score=43.07  Aligned_cols=132  Identities=17%  Similarity=0.179  Sum_probs=70.1

Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                      .++.+.-+++|++++++..-..+.-|+.- .....+..  ......|..|.|.|++.+.+++ ..|.|++=+........
T Consensus       146 s~~~~~r~~dG~~vavs~~G~~~~s~~~G-~~~w~~~~--r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w  221 (302)
T PF14870_consen  146 SINDITRSSDGRYVAVSSRGNFYSSWDPG-QTTWQPHN--RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETW  221 (302)
T ss_dssp             -EEEEEE-TTS-EEEEETTSSEEEEE-TT--SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE
T ss_pred             eeEeEEECCCCcEEEEECcccEEEEecCC-CccceEEc--cCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccc
Confidence            58888889999999998777777788865 11222222  3356789999999998876655 78888877622101111


Q ss_pred             eE----eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcC
Q psy8152         269 YK----YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRS  326 (444)
Q Consensus       269 ~~----~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~  326 (444)
                      ..    +....-.+..++|.+++...++|+ .|.+ +.....|+.=.+..    ....+..+.|..
T Consensus       222 ~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~  285 (302)
T PF14870_consen  222 SEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVN  285 (302)
T ss_dssp             ---B-TTSS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEE
T ss_pred             ccccCCcccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcC
Confidence            11    111223478999998877777655 4444 34455555544432    345577777753

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.80  E-value=0.0055  Score=37.01  Aligned_cols=33  Identities=15%  Similarity=0.009  Sum_probs=29.4

Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      ...|..++|+|...+||.++.+|.|.+|.+ +++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            457999999999999999999999999999 444

>KOG3630|consensus

Probab=96.72  E-value=0.021  Score=57.59  Aligned_cols=133  Identities=10%  Similarity=0.057  Sum_probs=84.2

Q ss_pred             EeCCCeEEE--EecCCcEEEEEcCCCCccc-----------cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152          94 SRYDECILT--AVKSGDVKLWRYKTEPDQW-----------TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        94 s~~~~~l~~--~~~dg~i~iw~~~~~~~~~-----------~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      .+++...++  .+.+-.|..||++......           ..+.......++.|+| -....+....|+.|++..+...
T Consensus       109 ~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~  188 (1405)
T KOG3630|consen  109 FHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQL  188 (1405)
T ss_pred             ccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhh
Confidence            456555333  3333468889986532111           1122234567888988 3445667778899998887653


Q ss_pred             ee-eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe---C-CCCC
Q psy8152         160 KN-IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD---I-PDVA  234 (444)
Q Consensus       160 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~-~~~~  234 (444)
                      .. +..++...                   ..++++|+|.|+.++.|-..|++.-|-..    ......+.   . ....
T Consensus       189 ~~~v~s~p~t~-------------------~~Tav~WSprGKQl~iG~nnGt~vQy~P~----leik~~ip~Pp~~e~yr  245 (1405)
T KOG3630|consen  189 AQNVTSFPVTN-------------------SQTAVLWSPRGKQLFIGRNNGTEVQYEPS----LEIKSEIPEPPVEENYR  245 (1405)
T ss_pred             hhhhcccCccc-------------------ceeeEEeccccceeeEecCCCeEEEeecc----cceeecccCCCcCCCcc
Confidence            32 22222222                   48999999999999999999999999876    22222221   1 1467


Q ss_pred             eeEEEEccCCCEEEE
Q psy8152         235 LSCITTTNQSHYVIV  249 (444)
Q Consensus       235 i~~~~~~~~~~~l~~  249 (444)
                      |.+|+|-....++++
T Consensus       246 vl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  246 VLSVTWLSTQEFLVV  260 (1405)
T ss_pred             eeEEEEecceeEEEE
Confidence            899999876666654

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.70  E-value=0.35  Score=41.77  Aligned_cols=168  Identities=10%  Similarity=0.119  Sum_probs=105.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecccc-ccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE-GDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +-...|.++.|+ |+.+.|++......-.||=...|+.+.++.+.+-. ..-....-+|++.++--.++.+.++.+....
T Consensus        83 g~~~nvS~LTyn-p~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t  161 (316)
T COG3204          83 GETANVSSLTYN-PDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT  161 (316)
T ss_pred             cccccccceeeC-CCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence            445569999999 78888888877777777777789998888665422 2223334456666666677888888766542


Q ss_pred             ccc----------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCC-cccccCc
Q psy8152         119 DQW----------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD-EFDLRRP  187 (444)
Q Consensus       119 ~~~----------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  187 (444)
                      .+.          .........-.++|.|....|+.+-.-+-+.||.+..............        |. ..+... 
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~--------~~~~~~~f~-  232 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLD--------PTADRDLFV-  232 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccC--------cccccceEe-
Confidence            221          1111145577899999888888888778888887764331111110000        00 000001 


Q ss_pred             cceeEEEEecCC-CEEEEEeCCceEEEEEcC
Q psy8152         188 VWVNGISFLPNS-DKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       188 ~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~  217 (444)
                      ..|.++.|++.. .+|+.+.+++.+.-.|..
T Consensus       233 ~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~  263 (316)
T COG3204         233 LDVSGLEFNAITNSLLVLSDESRRLLEVDLS  263 (316)
T ss_pred             eccccceecCCCCcEEEEecCCceEEEEecC
Confidence            137778888654 667777778888888887

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.65  E-value=0.37  Score=41.42  Aligned_cols=196  Identities=13%  Similarity=0.047  Sum_probs=113.3

Q ss_pred             eeeecccCccc--ceEEEeeeccCCcEEEEEEcCC--eEEEEeCCCCccccceeeccccccEEEEEe-CCCeEEEEecCC
Q psy8152          33 IQNVKYITNKA--SVLALNWGNVEESELLIAYSGQ--KIKIYDTDFKNFNTNTDVSFGEGDIVGVSR-YDECILTAVKSG  107 (444)
Q Consensus        33 ~~~~~~~~h~~--~v~~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg  107 (444)
                      +..+....|..  -...+.|. .++.++-+.+.-|  .|+.+++.+++......++. ...--.+.. ++++....-.++
T Consensus        33 ~~vv~~ypHd~~aFTQGL~~~-~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~-~~FgEGit~~~d~l~qLTWk~~  110 (264)
T PF05096_consen   33 YEVVETYPHDPTAFTQGLEFL-DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP-RYFGEGITILGDKLYQLTWKEG  110 (264)
T ss_dssp             EEEEEEEE--TT-EEEEEEEE-ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT-T--EEEEEEETTEEEEEESSSS
T ss_pred             eEEEEECCCCCcccCccEEec-CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc-cccceeEEEECCEEEEEEecCC
Confidence            44444445553  34567785 4666777776655  79999999999887766543 222333433 344455556789


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      ...+||..+.+.+. .+.....=+.++.  ++..|+.......|+++|..+.+....+.-....             ..-
T Consensus       111 ~~f~yd~~tl~~~~-~~~y~~EGWGLt~--dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g-------------~pv  174 (264)
T PF05096_consen  111 TGFVYDPNTLKKIG-TFPYPGEGWGLTS--DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNG-------------RPV  174 (264)
T ss_dssp             EEEEEETTTTEEEE-EEE-SSS--EEEE--CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETT-------------EE-
T ss_pred             eEEEEccccceEEE-EEecCCcceEEEc--CCCEEEEECCccceEEECCcccceEEEEEEEECC-------------EEC
Confidence            99999999887775 4444556677773  5666776666788999999886655554332210             001


Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe---------------CCCCCeeEEEEccCCCE-EEEE
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD---------------IPDVALSCITTTNQSHY-VIVG  250 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~-l~~~  250 (444)
                      ..++-+.|. +|...|-.=....|...|..   ++..+..+.               ....-.+.||+.|.... ++||
T Consensus       175 ~~LNELE~i-~G~IyANVW~td~I~~Idp~---tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  175 SNLNELEYI-NGKIYANVWQTDRIVRIDPE---TGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             --EEEEEEE-TTEEEEEETTSSEEEEEETT---T-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             CCcEeEEEE-cCEEEEEeCCCCeEEEEeCC---CCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            136667775 46666655556667777776   554444331               11345789999987554 5555

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.59  E-value=0.41  Score=41.15  Aligned_cols=173  Identities=12%  Similarity=0.039  Sum_probs=106.2

Q ss_pred             eCCCeEEEEecCC--cEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccce
Q psy8152          95 RYDECILTAVKSG--DVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHR  171 (444)
Q Consensus        95 ~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~  171 (444)
                      .++.++-+.+.-|  .|+.+++.+++..... .....---.++.. +.++....-.++...+||..+-+.+.++.-... 
T Consensus        54 ~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~E-  131 (264)
T PF05096_consen   54 DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGE-  131 (264)
T ss_dssp             ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEE-SSS-
T ss_pred             CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEEEEEecCCc-
Confidence            4667777777766  6899999999876411 1111122234443 334555556789999999999888877654433 


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--C---CCeeEEEEccCCCE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--D---VALSCITTTNQSHY  246 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~  246 (444)
                                        =..++  .+++.|+.......|+++|..   ......++...  .   ..++-+.|- +|..
T Consensus       132 ------------------GWGLt--~dg~~Li~SDGS~~L~~~dP~---~f~~~~~i~V~~~g~pv~~LNELE~i-~G~I  187 (264)
T PF05096_consen  132 ------------------GWGLT--SDGKRLIMSDGSSRLYFLDPE---TFKEVRTIQVTDNGRPVSNLNELEYI-NGKI  187 (264)
T ss_dssp             --------------------EEE--ECSSCEEEE-SSSEEEEE-TT---T-SEEEEEE-EETTEE---EEEEEEE-TTEE
T ss_pred             ------------------ceEEE--cCCCEEEEECCccceEEECCc---ccceEEEEEEEECCEECCCcEeEEEE-cCEE
Confidence                              34555  466677777777799999987   55555544322  2   234556665 6766


Q ss_pred             EEEEcCCCcEEEEEcCCCCcceeEecc------------c---cCceeEEEecCCCCEEEEEE
Q psy8152         247 VIVGSTTGDMMAVDLRGKGKPCYKYKG------------F---AGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~~~~~~~~~------------h---~~~i~~~~~s~~~~~l~s~~  294 (444)
                      .|-.-....|...|..+ |+.+..+.-            +   ..-.+.|||.|....|...+
T Consensus       188 yANVW~td~I~~Idp~t-G~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  188 YANVWQTDRIVRIDPET-GKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             EEEETTSSEEEEEETTT--BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EEEeCCCCeEEEEeCCC-CeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            66677778899999999 887776531            1   24578999998776555444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PHA02790 Kelch-like protein; Provisional

Probab=96.58  E-value=0.3  Score=47.10  Aligned_cols=145  Identities=6%  Similarity=-0.053  Sum_probs=71.0

Q ss_pred             CcccEEEecCCC-----cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC--CeEEEEeCCCCcc
Q psy8152           5 DDYNIYIGSSTG-----AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG--QKIKIYDTDFKNF   77 (444)
Q Consensus         5 ~~~~l~~g~~dg-----~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d--~~i~vw~~~~~~~   77 (444)
                      ++..+++|+.++     .+..|+..++.     +..+..+.....-.+++..  ++...+.|+.+  ..+..|+..+++.
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~-----W~~~~~m~~~r~~~~~v~~--~~~iYviGG~~~~~sve~ydp~~n~W  343 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNN-----WIPIPPMNSPRLYASGVPA--NNKLYVVGGLPNPTSVERWFHGDAAW  343 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCE-----EEECCCCCchhhcceEEEE--CCEEEEECCcCCCCceEEEECCCCeE
Confidence            345567776543     45567766554     2222222111111223322  46666777753  4578888766554


Q ss_pred             ccceeeccccccEEEEEeCCCeEEEEecCC---cEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152          78 NTNTDVSFGEGDIVGVSRYDECILTAVKSG---DVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKL  153 (444)
Q Consensus        78 ~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  153 (444)
                      ...-..+...........++++.+.|+.++   .+..||..+.+..... ......-.+++ .-++.+.+.|+   .+.+
T Consensus       344 ~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~-~~~~~IYv~GG---~~e~  419 (480)
T PHA02790        344 VNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL-VFGRRLFLVGR---NAEF  419 (480)
T ss_pred             EECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE-EECCEEEEECC---ceEE
Confidence            332222211112223345777778877653   4677887765443210 11111111222 22566666664   4677


Q ss_pred             EEcCCce
Q psy8152         154 WDLNTTK  160 (444)
Q Consensus       154 wd~~~~~  160 (444)
                      ||..+.+
T Consensus       420 ydp~~~~  426 (480)
T PHA02790        420 YCESSNT  426 (480)
T ss_pred             ecCCCCc
Confidence            8887654

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.50  E-value=0.18  Score=47.63  Aligned_cols=125  Identities=11%  Similarity=0.132  Sum_probs=75.6

Q ss_pred             ccccCCCeEEEEEecc----CCEEEEeeCCCeEEEEEcCC-----ceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         123 NFNVGPQLECMKHNKH----SNIIATGGKENDLKLWDLNT-----TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       123 ~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      ..+.-..|..+.|.|-    ...|+.......|.||.+..     ++.+......-.             ...+.-...+
T Consensus        52 viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~-------------e~~pvLpQGC  118 (671)
T PF15390_consen   52 VIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIR-------------EPFPVLPQGC  118 (671)
T ss_pred             EeeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeecc-------------CCcccCCCcc
Confidence            4455567999999982    33455555668899998863     222211111100             0011123567


Q ss_pred             EEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcC
Q psy8152         194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLR  262 (444)
Q Consensus       194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~  262 (444)
                      .|+|....|++-.....-.+++++ ....+....+ ...+.|.|.+|.++|+.|+++ +..=.-+|||-.
T Consensus       119 VWHPk~~iL~VLT~~dvSV~~sV~-~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  119 VWHPKKAILTVLTARDVSVLPSVH-CDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             cccCCCceEEEEecCceeEeeeee-eCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            899998888776665555677777 2233333334 456779999999999887764 333456788753

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=96.44  E-value=0.37  Score=47.60  Aligned_cols=133  Identities=14%  Similarity=0.184  Sum_probs=81.5

Q ss_pred             CCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCc-eeeeeee-cccceeeEeeeCCCcccccCccceeEEEEe--cCCCE
Q psy8152         128 PQLECMKHNK--HSNIIATGGKENDLKLWDLNTT-KNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFL--PNSDK  201 (444)
Q Consensus       128 ~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~  201 (444)
                      ..|+.|....  ....|+.+..||.|.+|.+..- ..+.... ............|. +.......+++++++  ...++
T Consensus       101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~-f~~~v~~SaWGLdIh~~~~~rl  179 (717)
T PF08728_consen  101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPF-FHLRVGASAWGLDIHDYKKSRL  179 (717)
T ss_pred             ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCC-eEeecCCceeEEEEEecCcceE
Confidence            3466665544  5678899999999999987541 0000000 00000001223333 333445568999998  77789


Q ss_pred             EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC---C---EEEEEcCCCcEEEEEc
Q psy8152         202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS---H---YVIVGSTTGDMMAVDL  261 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~---~l~~~~~dg~i~iwd~  261 (444)
                      ||+++....|.||-............-..+...|.+|+|-++.   .   .|++++-.|.+.+|++
T Consensus       180 IAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  180 IAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            9999988889888766111111111111356678999997753   2   7888999999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.41  E-value=0.55  Score=40.61  Aligned_cols=172  Identities=8%  Similarity=0.013  Sum_probs=110.4

Q ss_pred             cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         124 FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       124 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      .+-...+.++.|+|+.+.|++......-.|+=...|+.+.+++...-                 .-.-.|.+..++++.+
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-----------------~DpE~Ieyig~n~fvi  144 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-----------------SDPETIEYIGGNQFVI  144 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-----------------CChhHeEEecCCEEEE
Confidence            34445599999999888888888877777777777888877754331                 0255678888888888


Q ss_pred             EEeCCceEEEEEcCCCCCcc-------ceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc-ce--eEecc
Q psy8152         204 VCSKQGYVRVYDPKITTQRR-------PVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK-PC--YKYKG  273 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~--~~~~~  273 (444)
                      +--.++.+.++.+.......       ++......+...-.++|.|....|+.+-.-.-+.||.+.. .. .+  +....
T Consensus       145 ~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~-~~~~l~~~~~~~  223 (316)
T COG3204         145 VDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQ-SPSSLSVHASLD  223 (316)
T ss_pred             EehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEec-CCcccccccccC
Confidence            88888899888877111111       1111112255678999999988888888877788877654 22 11  11111


Q ss_pred             c-------cCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         274 F-------AGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       274 h-------~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +       -..|.++.|++.. .+|+-+..++.+.-.+... ..+..+.
T Consensus       224 ~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G-~~~~~ls  271 (316)
T COG3204         224 PTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG-EVIELLS  271 (316)
T ss_pred             cccccceEeeccccceecCCCCcEEEEecCCceEEEEecCC-CeeeeEE
Confidence            1       1346677888644 5666666667676666653 3344433

>PLN02193 nitrile-specifier protein

Probab=96.32  E-value=1.1  Score=43.10  Aligned_cols=107  Identities=8%  Similarity=-0.031  Sum_probs=54.2

Q ss_pred             CCcEEEEEEcC-----CeEEEEeCCCCccccceee---ccccccEEEEEeCCCeEEEEecCC-----cEEEEEcCCCCcc
Q psy8152          54 EESELLIAYSG-----QKIKIYDTDFKNFNTNTDV---SFGEGDIVGVSRYDECILTAVKSG-----DVKLWRYKTEPDQ  120 (444)
Q Consensus        54 ~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~---~~~~~~v~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~  120 (444)
                      ++..++.|+.+     ..+.+||+.+.+....-..   +...........++++++.|+.++     .+..||+.+.+..
T Consensus       228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~  307 (470)
T PLN02193        228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWF  307 (470)
T ss_pred             CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence            35666666654     4688888877655432211   000111122234566677776543     4667787765433


Q ss_pred             cccc----ccCCCeEEEEEeccCCEEEEeeCC----CeEEEEEcCCcee
Q psy8152         121 WTNF----NVGPQLECMKHNKHSNIIATGGKE----NDLKLWDLNTTKN  161 (444)
Q Consensus       121 ~~~~----~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~  161 (444)
                      ....    .....-..++. -++++++.++.+    ..+.+||+.+.+-
T Consensus       308 ~~~~~~~~~~~R~~~~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t~~W  355 (470)
T PLN02193        308 HCSTPGDSFSIRGGAGLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQDKW  355 (470)
T ss_pred             eCCCCCCCCCCCCCcEEEE-ECCcEEEEECCCCCccCceEEEECCCCEE
Confidence            2110    00000111222 256777777755    4578888877553

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.30  E-value=0.94  Score=42.16  Aligned_cols=89  Identities=12%  Similarity=0.068  Sum_probs=54.9

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEE---EEcCC-C----Ccccc---ccccC--CCeEEEEEec-----------cCCEEE
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKL---WRYKT-E----PDQWT---NFNVG--PQLECMKHNK-----------HSNIIA  143 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~i---w~~~~-~----~~~~~---~~~~~--~~v~~~~~~~-----------~~~~l~  143 (444)
                      ....+++|++.+|+.+..+..+.+   |+... +    .....   ...+.  ..|+++.|-|           +...++
T Consensus         4 ~~~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~   83 (415)
T PF14655_consen    4 DCSISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIA   83 (415)
T ss_pred             cceEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEE
Confidence            455678899999998877766555   53311 1    11111   11122  4678777755           246899


Q ss_pred             EeeCCCeEEEEEcCCceeeeeeecccceeeEeee
Q psy8152         144 TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSV  177 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  177 (444)
                      .|..+|.|++|.. +|..++.-..|...+..+.+
T Consensus        84 VG~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~  116 (415)
T PF14655_consen   84 VGTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKC  116 (415)
T ss_pred             EEecccEEEEEec-cchHHHHHhcCccceEEEEe
Confidence            9999999999997 45555555555554444444

>PLN02153 epithiospecifier protein

Probab=96.25  E-value=0.92  Score=41.58  Aligned_cols=65  Identities=9%  Similarity=-0.039  Sum_probs=34.0

Q ss_pred             CcEEEEEEcC-----CeEEEEeCCCCccccceee-----ccccccEEEEEeCCCeEEEEecC-----------CcEEEEE
Q psy8152          55 ESELLIAYSG-----QKIKIYDTDFKNFNTNTDV-----SFGEGDIVGVSRYDECILTAVKS-----------GDVKLWR  113 (444)
Q Consensus        55 ~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~-----~~~~~~v~~~s~~~~~l~~~~~d-----------g~i~iw~  113 (444)
                      +..++.|+.+     ..+.+||+.+.+....-..     +.......+...++++++.|+.+           ..|.+||
T Consensus        86 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd  165 (341)
T PLN02153         86 TKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYN  165 (341)
T ss_pred             CEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEE
Confidence            5666677653     3578888876554322111     00001111123456667777653           2477888


Q ss_pred             cCCCCc
Q psy8152         114 YKTEPD  119 (444)
Q Consensus       114 ~~~~~~  119 (444)
                      ..+.+-
T Consensus       166 ~~~~~W  171 (341)
T PLN02153        166 IADGKW  171 (341)
T ss_pred             CCCCeE
Confidence            876544

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=96.24  E-value=1  Score=42.00  Aligned_cols=271  Identities=8%  Similarity=0.046  Sum_probs=140.3

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCcccc--ceeeccccccEEEEEe------CCCeEEEEecCCcEEEEEcCCC--C----
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNFNT--NTDVSFGEGDIVGVSR------YDECILTAVKSGDVKLWRYKTE--P----  118 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~~~--~~~~~~~~~~v~~~s~------~~~~l~~~~~dg~i~iw~~~~~--~----  118 (444)
                      .+...|++|+..|.++||+........  .+--..-..+|..+..      .....++.-.-..+.||.+...  .    
T Consensus        35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g  114 (418)
T PF14727_consen   35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG  114 (418)
T ss_pred             CCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence            355799999999999999985443221  1111122567777632      1233333456678888887321  1    


Q ss_pred             ---cccccccc--CCCeEEEEEec----c-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152         119 ---DQWTNFNV--GPQLECMKHNK----H-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       119 ---~~~~~~~~--~~~v~~~~~~~----~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                         .+.....|  ......+++-|    . ..+|.+=+-||.+.+|+-+.-.....+...--                  
T Consensus       115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~ll------------------  176 (418)
T PF14727_consen  115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLL------------------  176 (418)
T ss_pred             cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCC------------------
Confidence               11123333  23344455444    2 36788889999999999765433333322111                  


Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCC--------------------CCCccceEEEeCCCC--CeeEEEEccCCCE
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKI--------------------TTQRRPVLKVDIPDV--ALSCITTTNQSHY  246 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~--------------------~~~~~~~~~~~~~~~--~i~~~~~~~~~~~  246 (444)
                       ...++|.|....|++++....|..|....                    .....+-+++...+.  .|..+.++.....
T Consensus       177 -PgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~  255 (418)
T PF14727_consen  177 -PGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESD  255 (418)
T ss_pred             -CcCeEEeecCCEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCce
Confidence             33477888888899999988998887641                    011122223332222  1223333323333


Q ss_pred             EEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec------CCC-CEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152         247 VIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP------LNE-NLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s------~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i  319 (444)
                      |++-+ ..++.+.+. + |......+---.+...+.|.      |.. ..++.++.++++.||.=.  +++.........
T Consensus       256 IvvLg-er~Lf~l~~-~-G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~--~L~WsA~l~~~P  330 (418)
T PF14727_consen  256 IVVLG-ERSLFCLKD-N-GSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDT--TLVWSAQLPHVP  330 (418)
T ss_pred             EEEEe-cceEEEEcC-C-CeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCC--eEEEecCCCCCC
Confidence            33333 234555554 2 54443333211222222221      221 258888999999998643  333333322222


Q ss_pred             eEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         320 TSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      -++.... +.     .-...+++-+.+|.+.+-=
T Consensus       331 Val~v~~-~~-----~~~G~IV~Ls~~G~L~v~Y  358 (418)
T PF14727_consen  331 VALSVAN-FN-----GLKGLIVSLSDEGQLSVSY  358 (418)
T ss_pred             EEEEecc-cC-----CCCceEEEEcCCCcEEEEE
Confidence            2333221 11     1135667777777776543

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=96.22  E-value=0.18  Score=46.70  Aligned_cols=150  Identities=13%  Similarity=0.115  Sum_probs=90.5

Q ss_pred             EEEeeeccCCcEEEE-EEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCC-------eEEEEecCCcEEEEEcCC-
Q psy8152          46 LALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDE-------CILTAVKSGDVKLWRYKT-  116 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~-------~l~~~~~dg~i~iw~~~~-  116 (444)
                      ..+..+..+.++|+. |..-..++-.|+..|+.+.....+  ...+..+.|..+       .-++|-.+..|.-.|.+- 
T Consensus       470 ~K~mlh~~dssli~~dg~~~~kLykmDIErGkvveeW~~~--ddvvVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~  547 (776)
T COG5167         470 EKIMLHDNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLK--DDVVVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRAR  547 (776)
T ss_pred             hhceeecCCcceEEecCCCcccceeeecccceeeeEeecC--CcceeecCCchhHHhcCccceEEeecccceEEeccccc
Confidence            333333245555554 555577888889999999888643  444777766432       233354555555555432 


Q ss_pred             CCccccccccCCCeEEEEEec----cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         117 EPDQWTNFNVGPQLECMKHNK----HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                      +..+. .......++.-.|+.    ...++|.|+..|-|++||--.-.....+++.+.                  .|..
T Consensus       548 gNKi~-v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~------------------aIk~  608 (776)
T COG5167         548 GNKIK-VVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGD------------------AIKH  608 (776)
T ss_pred             CCcee-eeeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCccccc------------------ceee
Confidence            21111 112222222222322    456999999999999999654444444555555                  6888


Q ss_pred             EEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         193 ISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       193 ~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      |..+.+|+++++.+. .++.+.|++
T Consensus       609 idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         609 IDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             eEeecCCcEEEEeec-ceEEEEecc
Confidence            999999988776655 478888877

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.16  E-value=0.76  Score=39.73  Aligned_cols=197  Identities=13%  Similarity=0.076  Sum_probs=116.5

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      .+.+..+.++   +++.+.+..+.-++|.|+.+......+..-.-.+-..++.-.|++..++..+.-+.+.|+.+.+...
T Consensus        86 ~~l~~Dv~vs---e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP~  162 (370)
T COG5276          86 RDLFADVRVS---EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQ  162 (370)
T ss_pred             hhhhheeEec---ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCce
Confidence            4455666777   6788888888899999998766554432222234556677789998888877778888987655432


Q ss_pred             ---cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         122 ---TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       122 ---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                         ...........++.  .|++-+.+..|+-+.+.|+.... +.+.  ++-.      +.|         .+.++..++
T Consensus       163 lagrya~~~~d~~~v~I--SGn~AYvA~~d~GL~ivDVSnp~sPvli--~~~n------~g~---------g~~sv~vsd  223 (370)
T COG5276         163 LAGRYALPGGDTHDVAI--SGNYAYVAWRDGGLTIVDVSNPHSPVLI--GSYN------TGP---------GTYSVSVSD  223 (370)
T ss_pred             eeeeeccCCCCceeEEE--ecCeEEEEEeCCCeEEEEccCCCCCeEE--EEEe------cCC---------ceEEEEecC
Confidence               22222333345555  47788888889999999998732 2211  1111      111         477888877


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE-EEccCCCEEEEEcCCCcEEEEEcCCC
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI-TTTNQSHYVIVGSTTGDMMAVDLRGK  264 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~  264 (444)
                      +.-+++..  +--+.+-|.. ..+...+.-......+ .++ .+.-.+++......+.-+.+.|+.++
T Consensus       224 nr~y~vvy--~egvlivd~s-~~ssp~~~gsyet~~p-~~~s~v~Vs~~~~Yvadga~gl~~idisnp  287 (370)
T COG5276         224 NRAYLVVY--DEGVLIVDVS-GPSSPTVFGSYETSNP-VSISTVPVSGEYAYVADGAKGLPIIDISNP  287 (370)
T ss_pred             CeeEEEEc--ccceEEEecC-CCCCceEeeccccCCc-ccccceecccceeeeeccccCceeEeccCC
Confidence            65555543  3346666766 1111122211222222 222 22234667777666767777787763

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=96.11  E-value=0.14  Score=47.39  Aligned_cols=145  Identities=21%  Similarity=0.249  Sum_probs=91.3

Q ss_pred             cCCEEE-EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-------CEEEEEeCCc
Q psy8152         138 HSNIIA-TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-------DKVAVCSKQG  209 (444)
Q Consensus       138 ~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~l~~~~~d~  209 (444)
                      +.++|+ .|+....++-.|+..|+.+-.+..+..                   + -+.|.|..       ..-++|-.+.
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW~~~dd-------------------v-vVqy~p~~kf~qmt~eqtlvGlS~~  537 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDD-------------------V-VVQYNPYFKFQQMTDEQTLVGLSDY  537 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEeecCCc-------------------c-eeecCCchhHHhcCccceEEeeccc
Confidence            444444 566677888889999999998888776                   3 34555542       1223455566


Q ss_pred             eEEEEEcCCCCCccceEEEeC--CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         210 YVRVYDPKITTQRRPVLKVDI--PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       210 ~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      .|.-.|.+..++...+...+.  ......+..-. ..-|||+++..|-|++||.-. .+....+++....|..+..+.+|
T Consensus       538 svFrIDPR~~gNKi~v~esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~G  615 (776)
T COG5167         538 SVFRIDPRARGNKIKVVESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANG  615 (776)
T ss_pred             ceEEecccccCCceeeeeehhccccccccccccc-cCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCC
Confidence            666667762221112222211  12222333322 345999999999999999665 45556677778899999999999


Q ss_pred             CEEEEEECCCcEEEEEcC
Q psy8152         288 NLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       288 ~~l~s~~~dg~i~vw~~~  305 (444)
                      ++|++.|.. .|.+-+++
T Consensus       616 k~ilaTCk~-yllL~d~~  632 (776)
T COG5167         616 KHILATCKN-YLLLTDVP  632 (776)
T ss_pred             cEEEEeecc-eEEEEecc
Confidence            988776654 45555553

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=96.02  E-value=0.84  Score=45.19  Aligned_cols=160  Identities=9%  Similarity=0.178  Sum_probs=95.1

Q ss_pred             CCEEEEeeCCCeEEEEEcCCceeee------eeecccceeeEeeeCCCccc--ccCccceeEEEEecCC--CEEEEEeCC
Q psy8152         139 SNIIATGGKENDLKLWDLNTTKNIF------SAKNVSHRVLVYSVKPDEFD--LRRPVWVNGISFLPNS--DKVAVCSKQ  208 (444)
Q Consensus       139 ~~~l~~~~~d~~i~vwd~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~--~~l~~~~~d  208 (444)
                      .++|+++. .+.|.||++.......      .+.....    ....++...  ...+..|+.|....-|  ..|+.|..|
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~----~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~Dd  123 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPE----FTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDD  123 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCcc----ccccccccccCCCCCceeeEEEecccCCeeEEEEEecC
Confidence            56666655 5789999987522211      1110000    000111110  1123346666654433  789999999


Q ss_pred             ceEEEEEcCC-------C----------CCccceEEEeCCCCCeeEEEEc--cCCCEEEEEcCCCcEEEEEcCCC-Cc-c
Q psy8152         209 GYVRVYDPKI-------T----------TQRRPVLKVDIPDVALSCITTT--NQSHYVIVGSTTGDMMAVDLRGK-GK-P  267 (444)
Q Consensus       209 ~~i~i~d~~~-------~----------~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~-~~-~  267 (444)
                      |.|.+|.+..       .          ...+|...+.. ....++++++  ...++||+++....|.||-+... .+ .
T Consensus       124 G~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~  202 (717)
T PF08728_consen  124 GDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-GASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFY  202 (717)
T ss_pred             CeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-CCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccc
Confidence            9999997631       0          01123333333 3467899998  77889999999888888866541 11 1


Q ss_pred             eeEeccccCceeEEEecCCC-----C-EEEEEECCCcEEEEEc
Q psy8152         268 CYKYKGFAGCVKDIACPLNE-----N-LILSVSLDRHFRVHDF  304 (444)
Q Consensus       268 ~~~~~~h~~~i~~~~~s~~~-----~-~l~s~~~dg~i~vw~~  304 (444)
                      ...-..|...|.+|+|-++.     . .|++++-.|.+.+|++
T Consensus       203 ~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  203 HVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             cccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            11111256678899997643     2 7888899999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.01  E-value=0.26  Score=46.70  Aligned_cols=117  Identities=10%  Similarity=0.077  Sum_probs=73.1

Q ss_pred             eeEEEEecCC----CEEEEEeCCceEEEEEcCC--CCCccceEEEeCC---CC--CeeEEEEccCCCEEEEEcCCCcEEE
Q psy8152         190 VNGISFLPNS----DKVAVCSKQGYVRVYDPKI--TTQRRPVLKVDIP---DV--ALSCITTTNQSHYVIVGSTTGDMMA  258 (444)
Q Consensus       190 i~~~~~~~~~----~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~~---~~--~i~~~~~~~~~~~l~~~~~dg~i~i  258 (444)
                      |..+.|.|-+    ..|++.-....|.+|-+..  ....+.+..-..+   .-  --..+.|+|....|++-.....-.+
T Consensus        59 V~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~  138 (671)
T PF15390_consen   59 VHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVL  138 (671)
T ss_pred             eeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEe
Confidence            8999999864    2455556678999999871  2223333322111   11  1245779999888887655555456


Q ss_pred             EEcCCCCcce-eEeccccCceeEEEecCCCCEEEEE-ECCCcEEEEEcCCC
Q psy8152         259 VDLRGKGKPC-YKYKGFAGCVKDIACPLNENLILSV-SLDRHFRVHDFHSK  307 (444)
Q Consensus       259 wd~~~~~~~~-~~~~~h~~~i~~~~~s~~~~~l~s~-~~dg~i~vw~~~~~  307 (444)
                      ++++.....+ .-+ ...+.|.|.+|.+||++|+.+ +..=.-+|||-...
T Consensus       139 ~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK  188 (671)
T PF15390_consen  139 PSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK  188 (671)
T ss_pred             eeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence            6766522222 333 346789999999999876654 44445688986543

>KOG1916|consensus

Probab=96.01  E-value=0.0037  Score=61.13  Aligned_cols=228  Identities=9%  Similarity=-0.006  Sum_probs=123.7

Q ss_pred             cCCcEEEEEcCCCCc-cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC--ceeeeeeecccceeeEeeeCCC
Q psy8152         105 KSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT--TKNIFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~  180 (444)
                      ..+-+++-+....-. .....+..+.|..+.|-. +...++  -.-|.+.||++..  |+....+..+.       ..|.
T Consensus       109 ~~~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~-------~~p~  179 (1283)
T KOG1916|consen  109 MENGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTP-------ITPY  179 (1283)
T ss_pred             hhhhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEee-------cCcC
Confidence            345677776554332 123556788888888854 322222  2336788998864  33222111110       0111


Q ss_pred             cccccCccceeEEEEe---cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE-----------EEccCCCE
Q psy8152         181 EFDLRRPVWVNGISFL---PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI-----------TTTNQSHY  246 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~---~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~-----------~~~~~~~~  246 (444)
                      +.      .+.-|.|.   ++.-++..+-.++.|++..+.+  ..+  .-+.+|...++.+           .++|||..
T Consensus       180 gs------~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~r--a~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv  249 (1283)
T KOG1916|consen  180 GS------DPQLVSWCPIAVNKVYICYGLKGGEIRLLNINR--ALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTV  249 (1283)
T ss_pred             CC------CcceeeecccccccceeeeccCCCceeEeeech--HHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcE
Confidence            11      23444444   3446677777788888877761  111  2233465544443           36899999


Q ss_pred             EEEEcCCCcEEEEEcCCC----CcceeEeccccC-ceeEEEecCCC---------CEEEEEE-CCCcEEEEEcCCCceEE
Q psy8152         247 VIVGSTTGDMMAVDLRGK----GKPCYKYKGFAG-CVKDIACPLNE---------NLILSVS-LDRHFRVHDFHSKKLLR  311 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~----~~~~~~~~~h~~-~i~~~~~s~~~---------~~l~s~~-~dg~i~vw~~~~~~~~~  311 (444)
                      +++.+.||.++.|.+.-.    -++++.++.|.+ +-.|.-|+.+.         .++++++ ....+++|.....+|+.
T Consensus       250 ~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cll  329 (1283)
T KOG1916|consen  250 FAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCLL  329 (1283)
T ss_pred             EEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhhh
Confidence            999999999888866431    456677777763 32232243221         2445544 34569999988877762


Q ss_pred             EeecCCceeEEEEcCCCcccccch------hhhhccccccCCCccccCCCc
Q psy8152         312 KDYMQSRLTSILVRSDFSLENETK------KEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      .+ ....|..+. -.+.+   +.+      -...+++.+-+++|++|.-..
T Consensus       330 ~~-~~d~v~iV~-p~~~~---v~~~~~~~~~~~~~v~r~v~~~i~~~qn~~  375 (1283)
T KOG1916|consen  330 DK-LIDGVQIVG-PHDGE---VTDLSMCQWMTTRLVSRSVDGTIKIWQNRK  375 (1283)
T ss_pred             hh-cccceEeec-CCCcc---ccchhhhHHHHHHHHHhhhHHHHHHhhcch
Confidence            21 122222222 11100   000      013566778899999996443

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.85  E-value=0.54  Score=43.59  Aligned_cols=101  Identities=11%  Similarity=0.055  Sum_probs=54.2

Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCC----CccceE-EEeC----CCCCeeEEEEccCCCEEEEEcCC-------
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITT----QRRPVL-KVDI----PDVALSCITTTNQSHYVIVGSTT-------  253 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~-~~~~----~~~~i~~~~~~~~~~~l~~~~~d-------  253 (444)
                      .+.|++.+++ +++ +.....+++.+.....    ....+. .+..    +......++|.|+|.+.++-+..       
T Consensus        74 p~Gi~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~  151 (367)
T TIGR02604        74 VTGLAVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTR  151 (367)
T ss_pred             ccceeEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceecc
Confidence            6789999888 444 4444333344554100    111222 1222    13446789999999876654321       


Q ss_pred             ------------CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         254 ------------GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       254 ------------g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                                  |.|.-++... ++ +..+.........++|+|+|.++++-.
T Consensus       152 ~~~~~~~~~~~~g~i~r~~pdg-~~-~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       152 PGTSDESRQGLGGGLFRYNPDG-GK-LRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             CCCccCcccccCceEEEEecCC-Ce-EEEEecCcCCCccceECCCCCEEEEcc
Confidence                        3344445443 22 333322223456899999998877644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG2377|consensus

Probab=95.73  E-value=0.27  Score=44.98  Aligned_cols=104  Identities=11%  Similarity=0.002  Sum_probs=72.9

Q ss_pred             cCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc--eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         185 RRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP--VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                      ...++|.++.|++|.+.||+--.+.+|.+++.. ....+.  ..+-+.....|....|+.. .-+|.-+..| +-+|-..
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~-~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~  140 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFI-PDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVL  140 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecC-CCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEc
Confidence            334589999999999999999999999999985 112222  2222334556889999866 4566555554 6777665


Q ss_pred             CCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         263 GKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       263 ~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      ...+.++..+.|+..|+=..|+++.+.++
T Consensus       141 pekrslRlVks~~~nvnWy~yc~et~v~L  169 (657)
T KOG2377|consen  141 PEKRSLRLVKSHNLNVNWYMYCPETAVIL  169 (657)
T ss_pred             hhhhhhhhhhhcccCccEEEEccccceEe
Confidence            53556666677888888888888876433

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.64  E-value=1.3  Score=38.45  Aligned_cols=149  Identities=11%  Similarity=0.043  Sum_probs=85.8

Q ss_pred             ccEEEEEeCCCeEEEEe---cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEE-cCCceee-
Q psy8152          88 GDIVGVSRYDECILTAV---KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWD-LNTTKNI-  162 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~---~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd-~~~~~~~-  162 (444)
                      ....+++++++.++...   ....++++..  +....... ....+..-.|.+++...+....+...+++. ...+... 
T Consensus        26 ~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   26 VTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             ccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            34456789998776655   2334555543  33332122 334778889999877777766666666664 2222211 


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCc------cceEEEeCCCC
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQR------RPVLKVDIPDV  233 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~------~~~~~~~~~~~  233 (444)
                      ........                ...|..+.++|+|..++...   .++.|.+--+......      .++........
T Consensus       103 ~~v~~~~~----------------~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~  166 (253)
T PF10647_consen  103 VEVDWPGL----------------RGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLS  166 (253)
T ss_pred             EEeccccc----------------CCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccC
Confidence            11111110                01599999999998777554   3577777765422222      11121223345


Q ss_pred             CeeEEEEccCCCEEEEEcCCCc
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGD  255 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~  255 (444)
                      .++.+.|.+++.+++.+...+.
T Consensus       167 ~v~~v~W~~~~~L~V~~~~~~~  188 (253)
T PF10647_consen  167 DVTDVAWSDDSTLVVLGRSAGG  188 (253)
T ss_pred             cceeeeecCCCEEEEEeCCCCC
Confidence            7899999999988777655543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.56  E-value=0.53  Score=47.28  Aligned_cols=89  Identities=13%  Similarity=0.158  Sum_probs=55.3

Q ss_pred             CCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceee--EeeeCCCcccccCccceeEEEEecCC---CE
Q psy8152         128 PQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVL--VYSVKPDEFDLRRPVWVNGISFLPNS---DK  201 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~---~~  201 (444)
                      ..|..+.++|+|.+|+..|..|. .|..+.. .-....+......+.  .+.+...-+.......|..+.|+|.+   ..
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            46888999999999999988664 4444422 100111111111111  12222222222334579999999975   78


Q ss_pred             EEEEeCCceEEEEEcC
Q psy8152         202 VAVCSKQGYVRVYDPK  217 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~  217 (444)
                      |++-+.|+++|+||+.
T Consensus       164 l~vLtsdn~lR~y~~~  179 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDIS  179 (717)
T ss_pred             EEEEecCCEEEEEecC
Confidence            9999999999999998

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG2280|consensus

Probab=95.53  E-value=1.6  Score=42.89  Aligned_cols=201  Identities=10%  Similarity=0.097  Sum_probs=102.9

Q ss_pred             CCeEEEEeCCCCccccceeeccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCcccccc---ccCCCeEEEEEeccC
Q psy8152          64 GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNF---NVGPQLECMKHNKHS  139 (444)
Q Consensus        64 d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~  139 (444)
                      -..|+||++. |+.+..+...  .+.+..+.++ ...|++...+|++++|++..........   .....|..+.|..+|
T Consensus        63 ~~~I~If~~s-G~lL~~~~w~--~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~G  139 (829)
T KOG2280|consen   63 RPYIRIFNIS-GQLLGRILWK--HGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNG  139 (829)
T ss_pred             ceeEEEEecc-ccchHHHHhc--CCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCc
Confidence            3568899875 6666665432  3477777764 4567778899999999976432221011   123345555555566


Q ss_pred             CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEc
Q psy8152         140 NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       140 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~  216 (444)
                      -.+.+.  +|.+.+-.-.....+.+++..+.             ...  ...|-...+.+   ..++-....--..++-.
T Consensus       140 Vavlt~--~g~v~~i~~~~~~~~~~~~diP~-------------~~~--~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~  202 (829)
T KOG2280|consen  140 VAVLTV--SGQVILINGVEEPKLRKMPDIPY-------------NEL--PKSCWTVFQPHRQSTILLDVDVAVGLHICQV  202 (829)
T ss_pred             eEEEec--CCcEEEEcCCCcchhhhCCCCCC-------------ccC--CCcceeEecCCCcceeEEeechhhhhcccce
Confidence            444443  35554433222222333322111             000  01122222221   11111110000111211


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCC
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNE  287 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~  287 (444)
                      .  ........+......+..+..||+.++|+.-...|.|.+-++.. .+.+..+.. -..+-..++|..+.
T Consensus       203 ~--~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~-~~~lce~~~~~~~~p~qm~Wcgnd  271 (829)
T KOG2280|consen  203 E--ESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDL-SQILCEFNCTDHDPPKQMAWCGND  271 (829)
T ss_pred             e--cccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecch-hhhhhccCCCCCCchHhceeecCC
Confidence            1  11222222333345678899999999999999999999998887 777766662 12233366776444

>KOG2247|consensus

Probab=95.37  E-value=0.0026  Score=57.91  Aligned_cols=144  Identities=10%  Similarity=0.129  Sum_probs=96.8

Q ss_pred             CeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeC
Q psy8152         129 QLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSK  207 (444)
Q Consensus       129 ~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~  207 (444)
                      ......|-|.+.-++.++.+..+..||-. ++.........                   ....++|..++. .++.+-.
T Consensus        36 ~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~tg-------------------~aldm~wDkegdvlavlAek   95 (615)
T KOG2247|consen   36 GPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELNPTG-------------------KALDMAWDKEGDVLAVLAEK   95 (615)
T ss_pred             ccceeeEecCCCceehhhhhhHHHhhhhh-cceecccCCch-------------------hHhhhhhccccchhhhhhhc
Confidence            34456778866678888888889999854 44443333222                   366788887774 4456677


Q ss_pred             CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         208 QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       208 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      .+.+.+||+. ......+ .+.+ ...-.-+.|++....++.+...|.+.|++... .+.+...-.|...++++++.+.+
T Consensus        96 ~~piylwd~n-~eytqqL-E~gg-~~s~sll~wsKg~~el~ig~~~gn~viynhgt-sR~iiv~Gkh~RRgtq~av~lEd  171 (615)
T KOG2247|consen   96 TGPIYLWDVN-SEYTQQL-ESGG-TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGT-SRRIIVMGKHQRRGTQIAVTLED  171 (615)
T ss_pred             CCCeeechhh-hhhHHHH-hccC-cchHHHHhhccCCccccccccccceEEEeccc-hhhhhhhcccccceeEEEecccc
Confidence            8899999998 1111111 1211 12222378999999999999999999999888 66665555599999999998876


Q ss_pred             CEEEEEECCC
Q psy8152         288 NLILSVSLDR  297 (444)
Q Consensus       288 ~~l~s~~~dg  297 (444)
                      .. +.++.|.
T Consensus       172 ~v-il~dcd~  180 (615)
T KOG2247|consen  172 YV-ILCDCDN  180 (615)
T ss_pred             ee-eecCcHH
Confidence            43 4444443

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.31  E-value=1.1  Score=44.00  Aligned_cols=109  Identities=11%  Similarity=0.168  Sum_probs=70.3

Q ss_pred             EeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe--cCCCEEEEEeCCceEE
Q psy8152         135 HNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL--PNSDKVAVCSKQGYVR  212 (444)
Q Consensus       135 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~d~~i~  212 (444)
                      -+.-++..++-+....+.|||.+.+...+...-..                 ...|..+.|.  |+++.+++.+..+.|.
T Consensus        37 gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~-----------------~~~I~dLDWtst~d~qsiLaVGf~~~v~   99 (631)
T PF12234_consen   37 GSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSE-----------------DDPIRDLDWTSTPDGQSILAVGFPHHVL   99 (631)
T ss_pred             ecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecC-----------------CCceeeceeeecCCCCEEEEEEcCcEEE
Confidence            33344444455556689999999877544433211                 1258999986  6788888888899999


Q ss_pred             EEEcC------CCCCccceEEEe--CC-CCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         213 VYDPK------ITTQRRPVLKVD--IP-DVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       213 i~d~~------~~~~~~~~~~~~--~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                      +|-..      ......++..+.  .+ ..+|....|.++|.+++.+  .+.+.|++-.
T Consensus       100 l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~  156 (631)
T PF12234_consen  100 LYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKW  156 (631)
T ss_pred             EEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCC
Confidence            98642      122334444432  22 3578999999999766544  3468888744

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.14  E-value=0.73  Score=45.13  Aligned_cols=110  Identities=13%  Similarity=0.071  Sum_probs=69.3

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE----EeCCCeEEEEecCCcEEEEEcC----
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV----SRYDECILTAVKSGDVKLWRYK----  115 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~----s~~~~~l~~~~~dg~i~iw~~~----  115 (444)
                      .++.+.-+ .-++..++-+....+.|||...+.....-.. .....|..+    .|+++.+++.+..+.|.+|.-.    
T Consensus        31 ~~~li~gs-s~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy  108 (631)
T PF12234_consen   31 NPSLISGS-SIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY  108 (631)
T ss_pred             CcceEeec-ccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence            33444444 2334444444456899999988775444332 346677666    3789999999999999998632    


Q ss_pred             -CCC----ccc--cccccC-CCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152         116 -TEP----DQW--TNFNVG-PQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus       116 -~~~----~~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                       ...    .++  .+..|+ .+|.+..|.++|.+++.++  +.+.|++-.
T Consensus       109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             hcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence             111    111  122333 6899999999887666554  578888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.12  E-value=1.6  Score=36.17  Aligned_cols=177  Identities=13%  Similarity=0.120  Sum_probs=88.4

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC------CeEEEEeCCCCccccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG------QKIKIYDTDFKNFNTN   80 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~~~~~~~~   80 (444)
                      ..|+++...+.|.+|++.....     +.+..+.--+.|..+.++ ..|++|+|--.+      ..+|+|-  +.+... 
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~-----~~~~~F~Tv~~V~~l~y~-~~GDYlvTlE~k~~~~~~~fvR~Y~--NWr~~~-   99 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEEC-----PLLCTFSTVGRVLQLVYS-EAGDYLVTLEEKNKRSPVDFVRAYF--NWRSQK-   99 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCC-----ceeEEEcchhheeEEEec-cccceEEEEEeecCCccceEEEEEE--Ehhhhc-
Confidence            5666667788899999985543     233333445899999999 789999984332      2566652  111110 


Q ss_pred             eeeccccccEEE-EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCC
Q psy8152          81 TDVSFGEGDIVG-VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        81 ~~~~~~~~~v~~-~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~  158 (444)
                          ....++.. +.  |. -+.++.....      ..+.--....-..++.|++..| .|++++ |+ ++.+.+|.+..
T Consensus       100 ----~~~~~v~vRia--G~-~v~~~~~~~~------~~qleiiElPl~~~p~ciaCC~~tG~LlV-g~-~~~l~lf~l~~  164 (215)
T PF14761_consen  100 ----EENSPVRVRIA--GH-RVTPSFNESS------KDQLEIIELPLSEPPLCIACCPVTGNLLV-GC-GNKLVLFTLKY  164 (215)
T ss_pred             ----ccCCcEEEEEc--cc-ccccCCCCcc------ccceEEEEecCCCCCCEEEecCCCCCEEE-Ec-CCEEEEEEEEE
Confidence                00111111 00  00 0111111111      0001101233466788999999 666555 44 36899998765


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEc
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  216 (444)
                      +...      ..+...+.|...-+.......+..+++..  .++|..+. -.++++.+
T Consensus       165 ~~~~------~~~~~~lDFe~~l~~~~~~~~p~~v~ic~--~yiA~~s~-~ev~Vlkl  213 (215)
T PF14761_consen  165 QTIQ------SEKFSFLDFERSLIDHIDNFKPTQVAICE--GYIAVMSD-LEVLVLKL  213 (215)
T ss_pred             EEEe------cccccEEechhhhhheecCceEEEEEEEe--eEEEEecC-CEEEEEEE
Confidence            3321      11112222222222222223356666653  56766554 46666654

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=95.09  E-value=2.1  Score=37.44  Aligned_cols=219  Identities=13%  Similarity=0.066  Sum_probs=122.9

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEEEEcC------CCCccccccc------cCCCeEEEEEeccCC------------EEE
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKLWRYK------TEPDQWTNFN------VGPQLECMKHNKHSN------------IIA  143 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~------~~~~~~~~~~------~~~~v~~~~~~~~~~------------~l~  143 (444)
                      .+=++++|.+.+-++....+...+|+..      ..+.+.....      .....+.+.|+....            .++
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi  104 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL  104 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence            3445667878787877778899999986      1222211111      134567777764322            357


Q ss_pred             EeeCCCeEEEEEcCCcee-----eeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEE-EEEeCCceEEEEE
Q psy8152         144 TGGKENDLKLWDLNTTKN-----IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKV-AVCSKQGYVRVYD  215 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l-~~~~~d~~i~i~d  215 (444)
                      .++.+|+|.-|...-...     ...+.....                ..-...+++...  +.+| ++--..++|.+||
T Consensus       105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~----------------gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd  168 (336)
T TIGR03118       105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQ----------------GNVYKGLAVGPTGGGDYLYAANFRQGRIDVFK  168 (336)
T ss_pred             EEeCCceEEeecCcCCcccccccEEEEccCCC----------------cceeeeeEEeecCCCceEEEeccCCCceEEec
Confidence            778899999998543221     111111000                011344555533  3444 4445688999998


Q ss_pred             cCCCCCccceE--EEe-----CCCCC--e---------eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec--ccc
Q psy8152         216 PKITTQRRPVL--KVD-----IPDVA--L---------SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK--GFA  275 (444)
Q Consensus       216 ~~~~~~~~~~~--~~~-----~~~~~--i---------~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~  275 (444)
                      -.   -.+...  .+.     ..-.+  |         +-..-.++.+.=+.|.--|.|-+||+.  ++.++++.  +.-
T Consensus       169 ~~---f~~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~--G~l~~r~as~g~L  243 (336)
T TIGR03118       169 GS---FRPPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN--GQLLRRVASSGRL  243 (336)
T ss_pred             Cc---cccccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC--CcEEEEeccCCcc
Confidence            76   221110  011     00011  1         111112222222334455789999987  78888885  233


Q ss_pred             CceeEEEecC------CCCEEEEEECCCcEEEEEcCCCceEEEeec-------CCceeEEEEcCC
Q psy8152         276 GCVKDIACPL------NENLILSVSLDRHFRVHDFHSKKLLRKDYM-------QSRLTSILVRSD  327 (444)
Q Consensus       276 ~~i~~~~~s~------~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-------~~~i~~~~~~~~  327 (444)
                      ..-+.|+..|      .+.+|+.--.||+|.+||..+++.+..+..       -..++.++|...
T Consensus       244 NaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGng  308 (336)
T TIGR03118       244 NAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGNG  308 (336)
T ss_pred             cCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCCC
Confidence            3456677655      456777777799999999999887776652       234667777554

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG1916|consensus

Probab=95.08  E-value=0.022  Score=56.07  Aligned_cols=112  Identities=13%  Similarity=0.111  Sum_probs=69.4

Q ss_pred             ceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccce-----EEEeCCCCCeeEEEEcc---CCCEEEEEcCCCcEEEE
Q psy8152         189 WVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPV-----LKVDIPDVALSCITTTN---QSHYVIVGSTTGDMMAV  259 (444)
Q Consensus       189 ~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iw  259 (444)
                      .+-.++|.... ..++  -.-|.+.+|++. --.+...     .........+.-|.|.|   +..++..+-.++.|++.
T Consensus       134 ~v~dl~fah~~~pk~~--~~vg~lfVy~vd-~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL  210 (1283)
T KOG1916|consen  134 GVGDLQFAHTKCPKGR--RLVGELFVYDVD-VLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLL  210 (1283)
T ss_pred             CcccccccccCChHHH--HHhhhhheeehH-hhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEe
Confidence            45566663221 1111  233577889876 1122111     11223344556667765   45677778888999988


Q ss_pred             EcCCCCcceeEeccccCceeEEE-----------ecCCCCEEEEEECCCcEEEEEcC
Q psy8152         260 DLRGKGKPCYKYKGFAGCVKDIA-----------CPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       260 d~~~~~~~~~~~~~h~~~i~~~~-----------~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ...+  .....|.+|...++.++           +||||..++.++.||.+++|.+.
T Consensus       211 ~~~r--a~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  211 NINR--ALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             eech--HHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            7765  33355566876666553           58999999999999999988763

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=94.96  E-value=2.8  Score=38.09  Aligned_cols=106  Identities=11%  Similarity=0.040  Sum_probs=52.5

Q ss_pred             CcEEEEEEcC-----CeEEEEeCCCCccc---cce-eeccccccEEEEEeCCCeEEEEec-----CCcEEEEEcCCCCcc
Q psy8152          55 ESELLIAYSG-----QKIKIYDTDFKNFN---TNT-DVSFGEGDIVGVSRYDECILTAVK-----SGDVKLWRYKTEPDQ  120 (444)
Q Consensus        55 ~~~l~~~~~d-----~~i~vw~~~~~~~~---~~~-~~~~~~~~v~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~  120 (444)
                      +..++.|+.+     ..+..||+.+.+..   ..+ ..+.......+...++++.+.|+.     ...+..||+.+.+..
T Consensus        73 ~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~  152 (323)
T TIGR03548        73 NGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEWF  152 (323)
T ss_pred             CEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCee
Confidence            5666677654     35667777665431   111 111111111222346667777764     245788888766543


Q ss_pred             ccc-cccCCCeEEEEEeccCCEEEEeeCCCe----EEEEEcCCce
Q psy8152         121 WTN-FNVGPQLECMKHNKHSNIIATGGKEND----LKLWDLNTTK  160 (444)
Q Consensus       121 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~----i~vwd~~~~~  160 (444)
                      ... ..........+...++++.+.|+.++.    +.+||+.+.+
T Consensus       153 ~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~  197 (323)
T TIGR03548       153 ELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ  197 (323)
T ss_pred             ECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence            211 111112222222336777888876542    4577776644

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PRK10115 protease 2; Provisional

Probab=94.95  E-value=4.8  Score=40.80  Aligned_cols=240  Identities=9%  Similarity=-0.024  Sum_probs=116.2

Q ss_pred             cceEEEeeeccCCcEEEEEEc-----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC------CcEEE
Q psy8152          43 ASVLALNWGNVEESELLIAYS-----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS------GDVKL  111 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d------g~i~i  111 (444)
                      -.+..+.|+ |++++|+.+..     .-.|++.++.++..+...-  .......+++++++.|+....+      ..|+.
T Consensus       127 ~~l~~~~~S-pdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i--~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~  203 (686)
T PRK10115        127 YTLGGMAIT-PDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELL--DNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWR  203 (686)
T ss_pred             EEEeEEEEC-CCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccc--cCcceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence            456778899 78998886533     3468899998886433211  1122336677888766555432      35777


Q ss_pred             EEcCCCC--ccccccccCCCeE-EEEEeccCCEEEEeeC---CCeEEEEEcC--CceeeeeeecccceeeEeeeCCCccc
Q psy8152         112 WRYKTEP--DQWTNFNVGPQLE-CMKHNKHSNIIATGGK---ENDLKLWDLN--TTKNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       112 w~~~~~~--~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      +++.++.  ....+........ .+..+.++++++..+.   ++.+.+++..  .+.....+.....             
T Consensus       204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------  270 (686)
T PRK10115        204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKD-------------  270 (686)
T ss_pred             EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCC-------------
Confidence            7887772  2212222222233 2223337776665443   4568888843  2322111111111             


Q ss_pred             ccCccceeEEEEecCCCEEEEEeC---CceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCCEEEEEcCCCcEEE
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSK---QGYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSHYVIVGSTTGDMMA  258 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i  258 (444)
                           ....+. +..+.+++....   ...|...++.   .......+..+  ...|..+.+. ...++++...+|.-++
T Consensus       271 -----~~~~~~-~~~~~ly~~tn~~~~~~~l~~~~~~---~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l  340 (686)
T PRK10115        271 -----HEYSLD-HYQHRFYLRSNRHGKNFGLYRTRVR---DEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSL  340 (686)
T ss_pred             -----CEEEEE-eCCCEEEEEEcCCCCCceEEEecCC---CcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEE
Confidence                 122222 222233332221   2233333443   11122233334  2367778877 3345556666776555


Q ss_pred             EEcCCCCcceeEec-cccCceeEEEec--CCCC-EEEEEE---CCCcEEEEEcCCCc
Q psy8152         259 VDLRGKGKPCYKYK-GFAGCVKDIACP--LNEN-LILSVS---LDRHFRVHDFHSKK  308 (444)
Q Consensus       259 wd~~~~~~~~~~~~-~h~~~i~~~~~s--~~~~-~l~s~~---~dg~i~vw~~~~~~  308 (444)
                      +-+...+..+..+. .....+..+.++  +++. ++++.+   .-+.++.+|+.+++
T Consensus       341 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        341 RQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             EEEcCCCCceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence            54432123344443 222223333444  3333 444433   23668888887654

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.94  E-value=1.2  Score=41.41  Aligned_cols=103  Identities=9%  Similarity=0.039  Sum_probs=57.7

Q ss_pred             ceeEEEEecCCCEEEEEe-----------CCc-eEEEEEcCCCCCcc--ceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152         189 WVNGISFLPNSDKVAVCS-----------KQG-YVRVYDPKITTQRR--PVLKVDIPDVALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~-----------~d~-~i~i~d~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                      ....|+|.++|+++++-.           ..+ .|.+++-. ...++  ....+.........|++.+++  |++++...
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~-dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~   91 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDA-DGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD   91 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcC-CCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence            367899999998877653           223 67777643 12222  223333333456889999888  44444444


Q ss_pred             cEEEEEcCCC------Ccce-eEecc----ccCceeEEEecCCCCEEEEEE
Q psy8152         255 DMMAVDLRGK------GKPC-YKYKG----FAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       255 ~i~iwd~~~~------~~~~-~~~~~----h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      .+++.+....      .+.+ ..+..    +......++|.|+|.+.++-+
T Consensus        92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            3334344320      1112 22322    234477899999998766555

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.94  E-value=1.7  Score=43.74  Aligned_cols=28  Identities=29%  Similarity=0.357  Sum_probs=21.1

Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      .|..|.++|+|.+|+..|..| |.|..+.
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP  113 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELP  113 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEec
Confidence            489999999999999888755 4444443

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG1898|consensus

Probab=94.92  E-value=4.1  Score=41.77  Aligned_cols=179  Identities=11%  Similarity=0.095  Sum_probs=100.6

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCc-EEEEEEc-----------CCeEEEEeCC-CCccccceee
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEES-ELLIAYS-----------GQKIKIYDTD-FKNFNTNTDV   83 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~-----------d~~i~vw~~~-~~~~~~~~~~   83 (444)
                      .|++++..+++.  .-+-.+..-.-.-.|.++.|+..+.. ++++|..           +|.++.|++- .++.+..+.-
T Consensus       854 ~I~~~d~~s~~~--~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~  931 (1205)
T KOG1898|consen  854 SIRVFDPKSGKI--ICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHK  931 (1205)
T ss_pred             eEEEEcCCCCce--EEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeec
Confidence            477777776653  11111111122345677777732222 3333322           3557777653 3442222222


Q ss_pred             ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc-c-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ce
Q psy8152          84 SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF-N-VGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TK  160 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~  160 (444)
                      ..-..++.++.|...++++| ....+++|++...+.+++.. . .+..|+.+++  .+..+++|...-.++++-.+. .+
T Consensus       932 T~~~~~v~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV~~~~y~~~~n 1008 (1205)
T KOG1898|consen  932 TEIPGPVGAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESVHFVRYRREDN 1008 (1205)
T ss_pred             cCCCccceEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEEEEeeccceEEEEEEecCCC
Confidence            23367788898877766654 55699999998877665222 1 3556777777  466788877666666555544 33


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      .+..+-...-                +.+|+++.+.. ...+|.+..=|.+.+-.+.
T Consensus      1009 ~l~~fadD~~----------------pR~Vt~~~~lD-~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 1009 QLIVFADDPV----------------PRHVTALELLD-YDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred             eEEEEeCCCc----------------cceeeEEEEec-CCceeeccccCcEEEEECC
Confidence            3333322221                33688777764 3567777776777666665

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=94.89  E-value=1.1  Score=38.35  Aligned_cols=149  Identities=12%  Similarity=0.188  Sum_probs=83.4

Q ss_pred             EEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC---CeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         109 VKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE---NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       109 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      -.+||+.+++..........-+.+-.+.++|++|.+|+.-   ..+++++.-...........          +.  .+.
T Consensus        48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~----------~~--~m~  115 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTES----------PN--DMQ  115 (243)
T ss_pred             EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceEC----------cc--ccc
Confidence            4589998887654333333334444677899999998862   34666664330000000000          00  123


Q ss_pred             CccceeEEEEecCCCEEEEEeCCc-eEEEEEcCCCCCccceE-EEe------CCCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQG-YVRVYDPKITTQRRPVL-KVD------IPDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~-~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                      .+.|--++...|+|+.|+.|+... +..+|... ........ .+.      .....-..+...|+|++++.+..+.  .
T Consensus       116 ~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~-~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~  192 (243)
T PF07250_consen  116 SGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPK-GPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--I  192 (243)
T ss_pred             CCCccccceECCCCCEEEEeCcCCCcccccCCc-cCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--E
Confidence            344777778889999999888764 34455543 11111111 111      1112223566789999999887654  5


Q ss_pred             EEEcCCCCcceeEecc
Q psy8152         258 AVDLRGKGKPCYKYKG  273 (444)
Q Consensus       258 iwd~~~~~~~~~~~~~  273 (444)
                      |||..+ .+.++.++.
T Consensus       193 i~d~~~-n~v~~~lP~  207 (243)
T PF07250_consen  193 IYDYKT-NTVVRTLPD  207 (243)
T ss_pred             EEeCCC-CeEEeeCCC
Confidence            678887 666666663

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.88  E-value=0.12  Score=30.31  Aligned_cols=32  Identities=19%  Similarity=0.128  Sum_probs=26.2

Q ss_pred             cceEEEeeeccCC--cEEEEEEcCCeEEEEeCCC
Q psy8152          43 ASVLALNWGNVEE--SELLIAYSGQKIKIYDTDF   74 (444)
Q Consensus        43 ~~v~~~~~~~~~~--~~l~~~~~d~~i~vw~~~~   74 (444)
                      ++|.++.|+|..+  ++|+.+-.-+.|.|+|+.+
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            4789999995445  6888888889999999975

It contains a characteristic DLL sequence motif.

>KOG2377|consensus

Probab=94.83  E-value=0.77  Score=42.16  Aligned_cols=133  Identities=11%  Similarity=0.029  Sum_probs=80.5

Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee-
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY-  269 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-  269 (444)
                      +.+-|.. .+..+.+...|.+.=|-+...+...++.--....++|.++.||+|.+.||+--.+..|.+++... .++.. 
T Consensus        26 ngvFfDD-aNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~-d~~~l~  103 (657)
T KOG2377|consen   26 NGVFFDD-ANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIP-DNSQLE  103 (657)
T ss_pred             cceeecc-CcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCC-CchhhH
Confidence            4455543 33333344556666777662222233322223466999999999999999999999999999854 33322 


Q ss_pred             ---EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce-EEE-eecCCceeEEEEcCC
Q psy8152         270 ---KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL-LRK-DYMQSRLTSILVRSD  327 (444)
Q Consensus       270 ---~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~-~~~-~~~~~~i~~~~~~~~  327 (444)
                         +.+..+..|....|+.. .-+|-.+..| +-+|.+...+. ++. ..+.-.|+-.+|.+.
T Consensus       104 ~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~e  164 (657)
T KOG2377|consen  104 YTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPE  164 (657)
T ss_pred             HHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccc
Confidence               22233456889999765 5555555444 66776655322 222 236666777777665

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=94.82  E-value=3.2  Score=38.08  Aligned_cols=198  Identities=12%  Similarity=0.082  Sum_probs=110.4

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccE---EEEEeCCCe--EEEEec-C---CcEEEEEcCC--CCccc
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDI---VGVSRYDEC--ILTAVK-S---GDVKLWRYKT--EPDQW  121 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v---~~~s~~~~~--l~~~~~-d---g~i~iw~~~~--~~~~~  121 (444)
                      |...+++.....+-+.+||++ |+.+..+.. +....|   ..|...++.  |+.++. +   ..|++|.+..  +... 
T Consensus        66 p~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~-Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~-  142 (381)
T PF02333_consen   66 PAKSLIIGTDKKGGLYVYDLD-GKELQSLPV-GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT-  142 (381)
T ss_dssp             GGG-EEEEEETTTEEEEEETT-S-EEEEE-S-S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE-
T ss_pred             cccceEEEEeCCCCEEEEcCC-CcEEEeecC-CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcce-
Confidence            456788888888999999997 555555531 111111   223345544  444443 2   4699998763  2221 


Q ss_pred             cccc-------cCCCeEEEEEe--c-cCC-EEEEeeCCCeEEEEEcCC---c----eeeeeeecccceeeEeeeCCCccc
Q psy8152         122 TNFN-------VGPQLECMKHN--K-HSN-IIATGGKENDLKLWDLNT---T----KNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       122 ~~~~-------~~~~v~~~~~~--~-~~~-~l~~~~~d~~i~vwd~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      .+..       ....++.+|+.  | ++. +++....+|.+..|-+..   +    +.++.+....              
T Consensus       143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~s--------------  208 (381)
T PF02333_consen  143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGS--------------  208 (381)
T ss_dssp             E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS--------------
T ss_pred             EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCC--------------
Confidence            1111       11246777774  3 444 555677889988887752   2    2444544333              


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC--CccceEEEeC--CCCCeeEEEEcc--C--CCEEEEEcCCCc
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT--QRRPVLKVDI--PDVALSCITTTN--Q--SHYVIVGSTTGD  255 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~--~~~~i~~~~~~~--~--~~~l~~~~~dg~  255 (444)
                           .+..|.......+|..+-++.-|.-|+.....  ....+....+  ....|-.|++-.  +  |-+|++.-.+++
T Consensus       209 -----Q~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~s  283 (381)
T PF02333_consen  209 -----QPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNS  283 (381)
T ss_dssp             ------EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTE
T ss_pred             -----cceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCe
Confidence                 48888888878899999999888888876111  1222222222  234577777743  3  334455556778


Q ss_pred             EEEEEcCCCCcceeEec
Q psy8152         256 MMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~~  272 (444)
                      ..||+...+...+..|.
T Consensus       284 f~Vy~r~~~~~~~g~f~  300 (381)
T PF02333_consen  284 FAVYDREGPNAYVGSFR  300 (381)
T ss_dssp             EEEEESSTT--EEEEEE
T ss_pred             EEEEecCCCCcccceEE
Confidence            99999876344455553

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PRK13684 Ycf48-like protein; Provisional

Probab=94.59  E-value=3.5  Score=37.59  Aligned_cols=147  Identities=16%  Similarity=0.064  Sum_probs=77.4

Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEE-EEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRV-YDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP  267 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i-~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  267 (444)
                      .+.++.+.|++.+++++. .|.+.. ++-. ......+  .......++.+.+.|+++.++++ ..|.+++=.... +..
T Consensus       174 ~~~~i~~~~~g~~v~~g~-~G~i~~s~~~g-g~tW~~~--~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~-G~s  247 (334)
T PRK13684        174 VVRNLRRSPDGKYVAVSS-RGNFYSTWEPG-QTAWTPH--QRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDD-LES  247 (334)
T ss_pred             eEEEEEECCCCeEEEEeC-CceEEEEcCCC-CCeEEEe--eCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCC-CCc
Confidence            588899999876665554 454432 2222 0112222  12345678999999999877766 457664322333 332


Q ss_pred             eeEecc----ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhh
Q psy8152         268 CYKYKG----FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQ  339 (444)
Q Consensus       268 ~~~~~~----h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~  339 (444)
                      -.....    ....+..+.+.|++..++ ++.+|.|. .....++.-..+.    .......+.+...         ...
T Consensus       248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~---------~~~  316 (334)
T PRK13684        248 WSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDP---------EKG  316 (334)
T ss_pred             cccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCC---------Cce
Confidence            222221    123578889998777555 45667554 3444444322221    2224555655533         123


Q ss_pred             ccccccCCCccccC
Q psy8152         340 EHSEEKGDSDEKYD  353 (444)
Q Consensus       340 ~~s~~~d~~i~~W~  353 (444)
                      ++ .+..|.|-.|+
T Consensus       317 ~~-~G~~G~il~~~  329 (334)
T PRK13684        317 FV-LGQRGVLLRYV  329 (334)
T ss_pred             EE-ECCCceEEEec
Confidence            33 45556665543

>KOG2247|consensus

Probab=94.56  E-value=0.013  Score=53.60  Aligned_cols=233  Identities=8%  Similarity=0.067  Sum_probs=132.2

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +..+++++.+..+..||-.....     ...   ..++....|+|. .++..++ .+-..+.+.+|++.+......-..-
T Consensus        46 ~~nlavaca~tiv~~YD~agq~~-----le~---n~tg~aldm~wD-kegdvlavlAek~~piylwd~n~eytqqLE~gg  116 (615)
T KOG2247|consen   46 GHNLAVACANTIVIYYDKAGQVI-----LEL---NPTGKALDMAWD-KEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGG  116 (615)
T ss_pred             CCceehhhhhhHHHhhhhhccee-----ccc---CCchhHhhhhhc-cccchhhhhhhcCCCeeechhhhhhHHHHhccC
Confidence            44577788887888887543331     111   235677788898 4666655 4666789999999754332221111


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee-ee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN-IF  163 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~  163 (444)
                      .+......+++....++.+...|.+.|++..+.+.+...-.|...++++++.+.+ +.+.++.|..+.+-...+... +.
T Consensus       117 ~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd-~vil~dcd~~L~v~~qegeta~lt  195 (615)
T KOG2247|consen  117 TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLED-YVILCDCDNTLSVTTQEGETASLT  195 (615)
T ss_pred             cchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccc-eeeecCcHHHHHHhhhccceeeee
Confidence            2344445667777888888899999999998887775444499999999999865 455555565554433222111 11


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEE---EecCCCEEEEEeCCceEEE--EEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS---FLPNSDKVAVCSKQGYVRV--YDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~l~~~~~d~~i~i--~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      ...+...          ..      ...+++   |..-+..+.+.-. |.+.+  -.+. ......-..++...+.+.|+
T Consensus       196 evggepd----------nm------~~~y~k~n~w~kage~m~sVvs-gKkhl~yak~n-E~D~pval~fq~~~gni~cy  257 (615)
T KOG2247|consen  196 EVGGEPD----------NM------DFFYGKVNGWGKAGETMVSVVS-GKKHLMYAKYN-ELDEPVALQFQEKYGNIHCY  257 (615)
T ss_pred             eccCccc----------hh------hhheeeeeccccccceeeeeee-cHHHHHHHhhc-CCCCccceEeeecCCceeEE
Confidence            1111111          00      011111   2222333332211 11111  1111 11122222566667778999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcce
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                      .|--|| +|..+..-|.|..-.+.+ .+..
T Consensus       258 rwylDg-~i~igf~ag~iV~iS~h~-aeLg  285 (615)
T KOG2247|consen  258 RWYLDG-YILIGFDAGYIVSISAHN-AELG  285 (615)
T ss_pred             EEeccc-cccccccceeEEEEeccc-hHHH
Confidence            998887 455677777777777766 5443

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.50  E-value=3.7  Score=37.42  Aligned_cols=69  Identities=10%  Similarity=-0.012  Sum_probs=41.4

Q ss_pred             ceeEEEEecC-------CCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         189 WVNGISFLPN-------SDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       189 ~i~~~~~~~~-------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                      .+..+.|.+.       +.+|++.-..+.|....+...........+. .....+..|++.|+|.+.++...+|.|+
T Consensus       254 ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  254 APTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             -EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred             ccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence            4677777643       3466666666788887776111111122222 3344789999999999888888888775

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.49  E-value=1.6  Score=35.86  Aligned_cols=172  Identities=10%  Similarity=0.045  Sum_probs=89.4

Q ss_pred             CCCeEEEEecC--CcEEEEEcCCCCccccccccCCCeEEEEEeccCCE-EEEeeCCCeEEEEEcCCceeeeeeeccccee
Q psy8152          96 YDECILTAVKS--GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus        96 ~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      +|.++.+.+.-  ..|++|++.+++.+....-....+..=-...-+.. .+..-.+|.-..+|.++.+++..+.-...  
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~Ge--  132 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGE--  132 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCc--
Confidence            45556665543  46999999988876421111111111111111222 22334577888888888777655543333  


Q ss_pred             eEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCC---CeeEEEEccCCCEE
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDV---ALSCITTTNQSHYV  247 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~---~i~~~~~~~~~~~l  247 (444)
                                       =..++  .+++.|+.+....+++.-|..   ......++.  ....   .++-+.|- +|...
T Consensus       133 -----------------GWgLt--~d~~~LimsdGsatL~frdP~---tfa~~~~v~VT~~g~pv~~LNELE~V-dG~ly  189 (262)
T COG3823         133 -----------------GWGLT--SDDKNLIMSDGSATLQFRDPK---TFAELDTVQVTDDGVPVSKLNELEWV-DGELY  189 (262)
T ss_pred             -----------------ceeee--cCCcceEeeCCceEEEecCHH---HhhhcceEEEEECCeecccccceeee-ccEEE
Confidence                             23333  355557666666677777766   322222221  1111   22334443 45555


Q ss_pred             EEEcCCCcEEEEEcCCCCcceeEec------------cccCceeEEEecCCC-CEEEEE
Q psy8152         248 IVGSTTGDMMAVDLRGKGKPCYKYK------------GFAGCVKDIACPLNE-NLILSV  293 (444)
Q Consensus       248 ~~~~~dg~i~iwd~~~~~~~~~~~~------------~h~~~i~~~~~s~~~-~~l~s~  293 (444)
                      |-.-....|...+..+ ++.+..+.            .|....+.+++.|++ +++++|
T Consensus       190 ANVw~t~~I~rI~p~s-GrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         190 ANVWQTTRIARIDPDS-GRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             EeeeeecceEEEcCCC-CcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            5444555566666666 66554443            234466788998877 455554

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=94.43  E-value=5  Score=38.67  Aligned_cols=203  Identities=15%  Similarity=0.118  Sum_probs=90.9

Q ss_pred             cccccEEEEEeCCCe---EEEEecCCcE--EEEEcCCCCcccccccc-CCCeEEEEEec----cCCEEEEe---eCCCeE
Q psy8152          85 FGEGDIVGVSRYDEC---ILTAVKSGDV--KLWRYKTEPDQWTNFNV-GPQLECMKHNK----HSNIIATG---GKENDL  151 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~---l~~~~~dg~i--~iw~~~~~~~~~~~~~~-~~~v~~~~~~~----~~~~l~~~---~~d~~i  151 (444)
                      .|..+|..+-|+-..   +.....+|..  ..+.+.++......... ...+..+...+    ++-+++..   ...+.+
T Consensus        51 ~h~ipV~GLyp~~~N~V~v~~~~~~G~~~~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~  130 (477)
T PF05935_consen   51 THEIPVIGLYPDYENTVTVTYTDEDGKTETKTYTITTPPLPGDIPDTPINEVTVLKTSDEEMEDGLYFVNGNDWDSSSYT  130 (477)
T ss_dssp             HHTEEEE---TTSEEEEEEEEEE-TTEEEEEEEEEE----------TT-SEEEEEE-E-TT-TT-EEEEEETT--BEEEE
T ss_pred             eEEEEEEEEeCCCeEEEEEEEEccCCeEeeeEEEEECCCcCccccccccceeeEeeccccccCCcEEEEeCCCCCCCceE
Confidence            456778888776432   2223346665  45555544433211110 01233443222    33344444   244566


Q ss_pred             EEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC
Q psy8152         152 KLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP  231 (444)
Q Consensus       152 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  231 (444)
                      .++|.. |.....+.....                  ....+...++|.+++...  ..++.+|+.    ++.+......
T Consensus       131 ~~iD~~-G~Vrw~~~~~~~------------------~~~~~~~l~nG~ll~~~~--~~~~e~D~~----G~v~~~~~l~  185 (477)
T PF05935_consen  131 YLIDNN-GDVRWYLPLDSG------------------SDNSFKQLPNGNLLIGSG--NRLYEIDLL----GKVIWEYDLP  185 (477)
T ss_dssp             EEEETT-S-EEEEE-GGGT--------------------SSEEE-TTS-EEEEEB--TEEEEE-TT------EEEEEE--
T ss_pred             EEECCC-ccEEEEEccCcc------------------ccceeeEcCCCCEEEecC--CceEEEcCC----CCEEEeeecC
Confidence            677754 555555543332                  111256778888777655  788888887    4444443322


Q ss_pred             CCC---eeEEEEccCCCEEEEEcC-------------CCcEEEEEcCCCCcceeEec--cc-------------------
Q psy8152         232 DVA---LSCITTTNQSHYVIVGST-------------TGDMMAVDLRGKGKPCYKYK--GF-------------------  274 (444)
Q Consensus       232 ~~~---i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~~~~--~h-------------------  274 (444)
                      ...   =..+...|+|++|+.+..             .-.|..+| .+ ++.+..+.  .|                   
T Consensus       186 ~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~t-G~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~  263 (477)
T PF05935_consen  186 GGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PT-GEVVWEWDFFDHLDPYRDTVLKPYPYGDISG  263 (477)
T ss_dssp             TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TT-S-EEEEEEGGGTS-TT--TTGGT--SSSSS-
T ss_pred             CcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CC-CCEEEEEehHHhCCccccccccccccccccc
Confidence            211   245677888988887761             11244444 44 44443322  01                   


Q ss_pred             ------cCceeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         275 ------AGCVKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       275 ------~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                            --.++++.+.+ ++.+|+|+-.-..|...+..++++...+.
T Consensus       264 ~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg  310 (477)
T PF05935_consen  264 SGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILG  310 (477)
T ss_dssp             SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES
T ss_pred             CCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeC
Confidence                  02578899988 45556665555588888988888877665

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>KOG2280|consensus

Probab=94.30  E-value=4.3  Score=40.04  Aligned_cols=186  Identities=12%  Similarity=0.073  Sum_probs=93.0

Q ss_pred             CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         106 SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       106 dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      .-.|+||++. |+.+....-....+..+-|+.+. .|++...+|++++|++-... +... +...            +..
T Consensus        63 ~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~-ie~~-svg~------------e~~  126 (829)
T KOG2280|consen   63 RPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEF-IESN-SVGF------------ESQ  126 (829)
T ss_pred             ceeEEEEecc-ccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhh-hccc-cccc------------ccc
Confidence            3468888875 55554444444488899999654 56677889999999986422 2111 0000            000


Q ss_pred             CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe---CCCCCeeEEEEccCCC---EEEEEc-CCCcEEE
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD---IPDVALSCITTTNQSH---YVIVGS-TTGDMMA  258 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~---~l~~~~-~dg~i~i  258 (444)
                      .+ .|..+.+..+|-.++  ..+|.+.+-.-.   ......+++   ....+-+|-...+++.   .++-.. ..+ ..+
T Consensus       127 ~~-~I~ec~~f~~GVavl--t~~g~v~~i~~~---~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~  199 (829)
T KOG2280|consen  127 MS-DIVECRFFHNGVAVL--TVSGQVILINGV---EEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHI  199 (829)
T ss_pred             cC-ceeEEEEecCceEEE--ecCCcEEEEcCC---CcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcc
Confidence            11 244444444453333  344444443322   121222222   1222212222222211   111111 000 111


Q ss_pred             EEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         259 VDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       259 wd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +-..........+....+.+..+..||+.++|+--...|.|.+-.+...+.+..+.
T Consensus       200 ~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~  255 (829)
T KOG2280|consen  200 CQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN  255 (829)
T ss_pred             cceecccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence            21111112222333234567788999999999999999999998888776666554

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=94.29  E-value=4.1  Score=37.02  Aligned_cols=66  Identities=17%  Similarity=0.110  Sum_probs=33.0

Q ss_pred             EeCCCeEEEEecC-----CcEEEEEcCCCCcc---ccccccCCCe--EEEEEeccCCEEEEeeC-----CCeEEEEEcCC
Q psy8152          94 SRYDECILTAVKS-----GDVKLWRYKTEPDQ---WTNFNVGPQL--ECMKHNKHSNIIATGGK-----ENDLKLWDLNT  158 (444)
Q Consensus        94 s~~~~~l~~~~~d-----g~i~iw~~~~~~~~---~~~~~~~~~v--~~~~~~~~~~~l~~~~~-----d~~i~vwd~~~  158 (444)
                      ..++.+++.|+.+     ..+..+|+.+.+..   .....-..+.  .+++. -++++.+.|+.     ...+..||+.+
T Consensus        70 ~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~  148 (323)
T TIGR03548        70 SVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLET  148 (323)
T ss_pred             EECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCC
Confidence            4466677777754     34666777665431   1111111111  12222 25667777764     23577777766


Q ss_pred             ce
Q psy8152         159 TK  160 (444)
Q Consensus       159 ~~  160 (444)
                      .+
T Consensus       149 ~~  150 (323)
T TIGR03548       149 QE  150 (323)
T ss_pred             CC
Confidence            43

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PRK10115 protease 2; Provisional

Probab=94.24  E-value=7.1  Score=39.63  Aligned_cols=191  Identities=6%  Similarity=-0.012  Sum_probs=95.9

Q ss_pred             EEEEeCCCeEEEEec-----CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC------CeEEEEEcCCc
Q psy8152          91 VGVSRYDECILTAVK-----SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE------NDLKLWDLNTT  159 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~  159 (444)
                      ..++|++++|+.+..     ...|++.++.++..+........  ..++|.++++.|+....+      ..|+.+++.++
T Consensus       132 ~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~  209 (686)
T PRK10115        132 MAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTP  209 (686)
T ss_pred             EEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCC
Confidence            345789998776533     23588999988875432222222  469999988877665442      35777787776


Q ss_pred             --eeeeeeecccceeeEeeeCCCcccccCcccee-EEEEecCCCEEEEEeC---CceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         160 --KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN-GISFLPNSDKVAVCSK---QGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                        +....+.....                  ... .+..+.++++++..+.   ++.+.+|+.. .....+...+.....
T Consensus       210 ~~~d~lv~~e~~~------------------~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~  270 (686)
T PRK10115        210 ASQDELVYEEKDD------------------TFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE-LADAEPFVFLPRRKD  270 (686)
T ss_pred             hhHCeEEEeeCCC------------------CEEEEEEEcCCCCEEEEEEECCccccEEEEECc-CCCCCceEEEECCCC
Confidence              22222222122                  122 2233446766554433   4578888864 112222222222222


Q ss_pred             CeeEEEEccCCCEEEEEcC---CCcEEEEEcCCCCcceeEeccc-c-CceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         234 ALSCITTTNQSHYVIVGST---TGDMMAVDLRGKGKPCYKYKGF-A-GCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~h-~-~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ....+. +..+.+++....   ...|...++..+++ ...+..+ . ..|..+.+. .+.++++...+|.-+++-+.
T Consensus       271 ~~~~~~-~~~~~ly~~tn~~~~~~~l~~~~~~~~~~-~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~  344 (686)
T PRK10115        271 HEYSLD-HYQHRFYLRSNRHGKNFGLYRTRVRDEQQ-WEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQIN  344 (686)
T ss_pred             CEEEEE-eCCCEEEEEEcCCCCCceEEEecCCCccc-CeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEc
Confidence            222222 223333333222   22344444442122 2333344 2 367888886 33566666777775555443

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=94.19  E-value=4.8  Score=37.50  Aligned_cols=53  Identities=15%  Similarity=0.189  Sum_probs=26.4

Q ss_pred             CCcEEEEEEcC-----------CeEEEEeCCCCccccceee-ccccccEEEEE-eCCCeEEEEecC
Q psy8152          54 EESELLIAYSG-----------QKIKIYDTDFKNFNTNTDV-SFGEGDIVGVS-RYDECILTAVKS  106 (444)
Q Consensus        54 ~~~~l~~~~~d-----------~~i~vw~~~~~~~~~~~~~-~~~~~~v~~~s-~~~~~l~~~~~d  106 (444)
                      ++...+.|+..           ..+..||..+.+....-.. +.......++. .++++.+.|+.+
T Consensus        84 ~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~  149 (376)
T PRK14131         84 DGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN  149 (376)
T ss_pred             CCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence            35666666643           2477788776554432210 11011112233 467777777754

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=94.15  E-value=4.6  Score=37.10  Aligned_cols=55  Identities=15%  Similarity=-0.026  Sum_probs=28.5

Q ss_pred             EeCCCeEEEEecC-----------CcEEEEEcCCCCccccccccCCCeEEE-EE-eccCCEEEEeeCC
Q psy8152          94 SRYDECILTAVKS-----------GDVKLWRYKTEPDQWTNFNVGPQLECM-KH-NKHSNIIATGGKE  148 (444)
Q Consensus        94 s~~~~~l~~~~~d-----------g~i~iw~~~~~~~~~~~~~~~~~v~~~-~~-~~~~~~l~~~~~d  148 (444)
                      ..++++.+.|+..           ..+..||..+.+............... +. .-++++.+.|+.+
T Consensus        61 ~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~  128 (346)
T TIGR03547        61 AIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN  128 (346)
T ss_pred             EECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence            4567777777753           246677877655432111111111111 11 2367788888764

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.08  E-value=0.2  Score=29.35  Aligned_cols=31  Identities=13%  Similarity=0.327  Sum_probs=26.4

Q ss_pred             CCeEEEEEec-cC--CEEEEeeCCCeEEEEEcCC
Q psy8152         128 PQLECMKHNK-HS--NIIATGGKENDLKLWDLNT  158 (444)
Q Consensus       128 ~~v~~~~~~~-~~--~~l~~~~~d~~i~vwd~~~  158 (444)
                      +.|.++.|+| .+  .+|+.+-.-+.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            4689999998 44  5888888899999999995

It contains a characteristic DLL sequence motif.

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=94.06  E-value=4.8  Score=36.98  Aligned_cols=53  Identities=11%  Similarity=0.126  Sum_probs=27.7

Q ss_pred             CCcEEEEEEcC-----------CeEEEEeCCCCcccccee-eccccccEEEE-EeCCCeEEEEecC
Q psy8152          54 EESELLIAYSG-----------QKIKIYDTDFKNFNTNTD-VSFGEGDIVGV-SRYDECILTAVKS  106 (444)
Q Consensus        54 ~~~~l~~~~~d-----------~~i~vw~~~~~~~~~~~~-~~~~~~~v~~~-s~~~~~l~~~~~d  106 (444)
                      ++...+.|+..           ..+..||..+.+....-. .+........+ ..++++.+.|+.+
T Consensus        63 ~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~  128 (346)
T TIGR03547        63 DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN  128 (346)
T ss_pred             CCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence            46666677653           247778887665544321 11111112223 3567777777754

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.99  E-value=0.52  Score=39.88  Aligned_cols=71  Identities=13%  Similarity=0.159  Sum_probs=51.3

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc------c--------ccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN------F--------NVGPQLECMKHNKHSNIIATGGKENDLKL  153 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  153 (444)
                      .++..+...+.+|++.+.+|.+++||+.+++.+...      .        .....|..+.++.+|.-|++-+ +|..+.
T Consensus        13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~   91 (219)
T PF07569_consen   13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYS   91 (219)
T ss_pred             CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEE
Confidence            455557788999999999999999999988765311      1        2445677788887777666655 467788


Q ss_pred             EEcCCc
Q psy8152         154 WDLNTT  159 (444)
Q Consensus       154 wd~~~~  159 (444)
                      |+..-+
T Consensus        92 y~~~L~   97 (219)
T PF07569_consen   92 YSPDLG   97 (219)
T ss_pred             eccccc
Confidence            876543

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PRK13684 Ycf48-like protein; Provisional

Probab=93.86  E-value=5.1  Score=36.58  Aligned_cols=153  Identities=11%  Similarity=0.091  Sum_probs=82.2

Q ss_pred             CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         127 GPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       127 ~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      ...+.++.+.|++.+++++. .|.+..- ... ++.-.......                 ...++++.+.|+++.++++
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s-~~~gg~tW~~~~~~~-----------------~~~l~~i~~~~~g~~~~vg  232 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSS-RGNFYST-WEPGQTAWTPHQRNS-----------------SRRLQSMGFQPDGNLWMLA  232 (334)
T ss_pred             cceEEEEEECCCCeEEEEeC-CceEEEE-cCCCCCeEEEeeCCC-----------------cccceeeeEcCCCCEEEEe
Confidence            45788999999876666655 4544421 112 22111111111                 1258899999988877665


Q ss_pred             eCCceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec---cccCceeEE
Q psy8152         206 SKQGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDI  281 (444)
Q Consensus       206 ~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~  281 (444)
                       ..|.+++=..........+..- ......+..+.+.|++..+++| .+|.|. ..... ++.-....   .-....+.+
T Consensus       233 -~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~-G~tW~~~~~~~~~~~~~~~~  308 (334)
T PRK13684        233 -RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDG-GKTWEKDPVGEEVPSNFYKI  308 (334)
T ss_pred             -cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCC-CCCCeECCcCCCCCcceEEE
Confidence             4576653222201122211110 1122357788999887765544 567554 34443 44444332   122357778


Q ss_pred             EecCCCCEEEEEECCCcEEEEE
Q psy8152         282 ACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      .|..+++.++ .+..|.|..|+
T Consensus       309 ~~~~~~~~~~-~G~~G~il~~~  329 (334)
T PRK13684        309 VFLDPEKGFV-LGQRGVLLRYV  329 (334)
T ss_pred             EEeCCCceEE-ECCCceEEEec
Confidence            8776655554 56778877665

>PLN02153 epithiospecifier protein

Probab=93.83  E-value=5.2  Score=36.65  Aligned_cols=105  Identities=6%  Similarity=0.023  Sum_probs=51.8

Q ss_pred             CcEEEEEEcC-------CeEEEEeCCCCccccceeeccc-cc---cEEEEEeCCCeEEEEecC-----CcEEEEEcCCCC
Q psy8152          55 ESELLIAYSG-------QKIKIYDTDFKNFNTNTDVSFG-EG---DIVGVSRYDECILTAVKS-----GDVKLWRYKTEP  118 (444)
Q Consensus        55 ~~~l~~~~~d-------~~i~vw~~~~~~~~~~~~~~~~-~~---~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~  118 (444)
                      +..++.|+.+       ..+.+||+.+.+....-..... ..   ........+++++.|+.+     ..+.+||+.+.+
T Consensus        33 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~  112 (341)
T PLN02153         33 DKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNE  112 (341)
T ss_pred             CEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCCE
Confidence            5566666652       3578888877654432111000 10   122234466677777653     357788887654


Q ss_pred             cccccccc-----CCC-eEEEEEeccCCEEEEeeCC-----------CeEEEEEcCCce
Q psy8152         119 DQWTNFNV-----GPQ-LECMKHNKHSNIIATGGKE-----------NDLKLWDLNTTK  160 (444)
Q Consensus       119 ~~~~~~~~-----~~~-v~~~~~~~~~~~l~~~~~d-----------~~i~vwd~~~~~  160 (444)
                      ... +...     ..+ ....+...++++++.|+.+           ..|.+||+.+.+
T Consensus       113 W~~-~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~  170 (341)
T PLN02153        113 WTF-LTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGK  170 (341)
T ss_pred             EEE-eccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCe
Confidence            332 1110     111 1111122256677777753           146677776543

>KOG2063|consensus

Probab=93.78  E-value=4  Score=41.74  Aligned_cols=71  Identities=11%  Similarity=0.052  Sum_probs=43.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCcccee-ee----eeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIK-NI----QNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF   77 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~-~~----~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~   77 (444)
                      -++.|++|+.+|.+++|.+........ ..    ..+...-+..+|..|... +.-..+ ....|+.|.++.+.+-+.
T Consensus        25 ~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~-~~~~~l-l~l~dsqi~~~~l~~~~~  100 (877)
T KOG2063|consen   25 YGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVC-ASLELL-LILSDSQIAVHKLPELEP  100 (877)
T ss_pred             hCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhc-chhcch-heecCCcceeeecCcccc
Confidence            468899999999999999876643110 00    001111235777777777 333333 344457888888765544

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=93.69  E-value=5.4  Score=36.35  Aligned_cols=75  Identities=20%  Similarity=0.232  Sum_probs=46.6

Q ss_pred             ceEEEeCCCCCeeEEEEcc-------CCCEEEEEcCCCcEEEEEcCCCCcceeE----eccccCceeEEEecCCCCEEEE
Q psy8152         224 PVLKVDIPDVALSCITTTN-------QSHYVIVGSTTGDMMAVDLRGKGKPCYK----YKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       224 ~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      ++..+..| ..+..+.|.+       .|.+|++.-..+.|....+.. ...+..    +......+..+++.|+|.++++
T Consensus       245 P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~  322 (331)
T PF07995_consen  245 PVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDE-DGSVTEEEEFLGGFGGRPRDVAQGPDGALYVS  322 (331)
T ss_dssp             -SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEET-TEEEEEEEEECTTSSS-EEEEEEETTSEEEEE
T ss_pred             cceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeec-CCCccceEEccccCCCCceEEEEcCCCeEEEE
Confidence            44445444 4466777753       456777777677888888875 432221    2234447899999999998888


Q ss_pred             EECCCcEE
Q psy8152         293 VSLDRHFR  300 (444)
Q Consensus       293 ~~~dg~i~  300 (444)
                      ...+|.|+
T Consensus       323 ~d~~G~iy  330 (331)
T PF07995_consen  323 DDSDGKIY  330 (331)
T ss_dssp             E-TTTTEE
T ss_pred             ECCCCeEe
Confidence            77888774

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=93.58  E-value=4.4  Score=34.94  Aligned_cols=243  Identities=13%  Similarity=-0.018  Sum_probs=135.7

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ...-..++-. +++..-+++...+.|--.|..+|+....--..+....-+-+-|++..-++-+.. -|.-.+-++.....
T Consensus        61 G~ap~dvapa-pdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~  138 (353)
T COG4257          61 GSAPFDVAPA-PDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTR  138 (353)
T ss_pred             CCCccccccC-CCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEE
Confidence            3445666777 688888888877777777888777655432222233334446777665543333 44444544444332


Q ss_pred             c--cccc-CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         122 T--NFNV-GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       122 ~--~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      .  ...| ........|.+.|++-+++.. |.---.|.. ...+..+....+                 ...+.|+..|+
T Consensus       139 f~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa-~~~i~vfpaPqG-----------------~gpyGi~atpd  199 (353)
T COG4257         139 FPLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPA-RNVISVFPAPQG-----------------GGPYGICATPD  199 (353)
T ss_pred             eecccccCCCcccceeeCCCccEEEeecc-ccceecCcc-cCceeeeccCCC-----------------CCCcceEECCC
Confidence            1  1122 455778888888888888763 211111111 111222222211                 13678899999


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc-ceeEeccccCc
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK-PCYKYKGFAGC  277 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~h~~~  277 (444)
                      |..-++.-.+..|...|.. ......+-.-.........+--+|.|+.-++....+.+..||... .. .-+.+.+.+..
T Consensus       200 Gsvwyaslagnaiaridp~-~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~-~sW~eypLPgs~ar  277 (353)
T COG4257         200 GSVWYASLAGNAIARIDPF-AGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSV-TSWIEYPLPGSKAR  277 (353)
T ss_pred             CcEEEEeccccceEEcccc-cCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCccc-ccceeeeCCCCCCC
Confidence            9888777777788887876 111111111111123345566677888888888888899888776 22 22334444444


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      -.++.....++.-.+--.-|.|.-+|-.+.
T Consensus       278 pys~rVD~~grVW~sea~agai~rfdpeta  307 (353)
T COG4257         278 PYSMRVDRHGRVWLSEADAGAIGRFDPETA  307 (353)
T ss_pred             cceeeeccCCcEEeeccccCceeecCcccc
Confidence            556666555555554444555666665543

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.47  E-value=1  Score=38.08  Aligned_cols=77  Identities=16%  Similarity=0.252  Sum_probs=46.1

Q ss_pred             eccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEE
Q psy8152         136 NKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD  215 (444)
Q Consensus       136 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  215 (444)
                      ...+.+|++-+.+|.+++||+.+++.+..-..... +  +...+ ..+......|..+.++.+|.-|++-+ +|..+.|+
T Consensus        19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~p-l--l~~~~-~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~   93 (219)
T PF07569_consen   19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAP-L--LNSSP-VSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS   93 (219)
T ss_pred             EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHH-H--hcccc-cccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence            34788899999999999999999876644311111 0  00000 00002223577788887776555543 46777787


Q ss_pred             cC
Q psy8152         216 PK  217 (444)
Q Consensus       216 ~~  217 (444)
                      ..
T Consensus        94 ~~   95 (219)
T PF07569_consen   94 PD   95 (219)
T ss_pred             cc
Confidence            66

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=93.32  E-value=6.8  Score=36.38  Aligned_cols=198  Identities=13%  Similarity=0.118  Sum_probs=104.8

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeecc--ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccC-CCeE
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSF--GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVG-PQLE  131 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~v~  131 (444)
                      ...++++..+|.|.-.|..++..+.......  ....-..+..+|+ |+.++.++.++.+|..+++.++...... ..+.
T Consensus        68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~  146 (370)
T COG1520          68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYA  146 (370)
T ss_pred             CCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEe
Confidence            4566666888888888988888665433221  0000001112444 7778889999999998898887444433 1111


Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC--Cc
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK--QG  209 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~  209 (444)
                      .-... ....++.++.++.+...+..++........... +   ..           .+..-....+ ..+..+..  ++
T Consensus       147 ~~~v~-~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~-~---~~-----------~~~~~~~~~~-~~vy~~~~~~~~  209 (370)
T COG1520         147 SPPVV-GDGTVYVGTDDGHLYALNADTGTLKWTYETPAP-L---SL-----------SIYGSPAIAS-GTVYVGSDGYDG  209 (370)
T ss_pred             cCcEE-cCcEEEEecCCCeEEEEEccCCcEEEEEecCCc-c---cc-----------ccccCceeec-ceEEEecCCCcc
Confidence            11222 223444444778999999888888776543221 0   00           0110001122 33333433  45


Q ss_pred             eEEEEEcCCCCCccceEEEeC----CCCCeeEEEEccC-----CCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         210 YVRVYDPKITTQRRPVLKVDI----PDVALSCITTTNQ-----SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       210 ~i~i~d~~~~~~~~~~~~~~~----~~~~i~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      .+.-++..   .+........    ....+........     +.-++.++.++.+...+..+ ++++..+...
T Consensus       210 ~~~a~~~~---~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~-G~~~W~~~~~  279 (370)
T COG1520         210 ILYALNAE---DGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADT-GELIWSFPAG  279 (370)
T ss_pred             eEEEEEcc---CCcEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCC-CceEEEEecc
Confidence            55555655   4444443211    1111100001001     22345677788888899998 9998888753

>KOG4460|consensus

Probab=93.14  E-value=1.4  Score=41.29  Aligned_cols=77  Identities=13%  Similarity=0.098  Sum_probs=51.6

Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCC--------CCcceeEec-----------cccCceeEEEecCCC---CEEE
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRG--------KGKPCYKYK-----------GFAGCVKDIACPLNE---NLIL  291 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~-----------~h~~~i~~~~~s~~~---~~l~  291 (444)
                      .|..+..++.|..++..+.+|.+.++=.+.        .++++...+           ...-.+..++|+|+.   ..|.
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            466778899999999999999765543222        032221111           111245677999976   5788


Q ss_pred             EEECCCcEEEEEcCCCceE
Q psy8152         292 SVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       292 s~~~dg~i~vw~~~~~~~~  310 (444)
                      .-+.|..||+|++.....+
T Consensus       185 iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  185 LLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             EEecCcEEEEEecCCcchh
Confidence            8889999999999764433

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=93.04  E-value=3.1  Score=31.61  Aligned_cols=114  Identities=15%  Similarity=0.225  Sum_probs=69.5

Q ss_pred             EEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc-----ceeeccccccEEEEE--e-----CCCeEEEEecCCcEEEEEc
Q psy8152          47 ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT-----NTDVSFGEGDIVGVS--R-----YDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        47 ~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~-----~~~~~~~~~~v~~~s--~-----~~~~l~~~~~dg~i~iw~~  114 (444)
                      .-.|. .....|+.++.-|.|.|++........     .+..-.-...|.++.  +     ....|+.|+. ..|..||+
T Consensus         3 iGkfD-G~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~-t~llaYDV   80 (136)
T PF14781_consen    3 IGKFD-GVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDV   80 (136)
T ss_pred             EEEeC-CCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEc
Confidence            34455 456678888888999999876432111     111112244555552  2     2345666655 48999999


Q ss_pred             CCCCccccccccCCCeEEEEEec----cCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152         115 KTEPDQWTNFNVGPQLECMKHNK----HSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus       115 ~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      ....-+. +..-...|+++.+-.    ...++++|+ +..|.-||....+..++
T Consensus        81 ~~N~d~F-yke~~DGvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   81 ENNSDLF-YKEVPDGVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             ccCchhh-hhhCccceeEEEEEecCCCCCcEEEECc-eEEEEEeCCCCcEEEEE
Confidence            9877663 556678888888744    334555554 56777777765555544

>KOG1983|consensus

Probab=92.98  E-value=5.1  Score=42.27  Aligned_cols=231  Identities=13%  Similarity=0.061  Sum_probs=105.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +-......++|+ +...+++.+...|.|++|-...-+......... ...+..+  -...........+..+.+|.....
T Consensus        33 G~~~~~~~~afD-~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~-~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~  110 (993)
T KOG1983|consen   33 GFPSTPSALAFD-PTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQN-QINVTRIELLVGISRNLVLSDDDSLHLWSIKIK  110 (993)
T ss_pred             CCCCCCcceeec-cccceEEEEEecccEEEecccceEEEecccccc-chhhhheeeeecccccceeecccceeeeccccc
Confidence            344567788899 789999999999999999765433332221110 0011111  111112222334445555554322


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee-eeeecccc-eeeE-eeeCCCcccccCccceeEEE
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI-FSAKNVSH-RVLV-YSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ..    .-+...+++....+--.+ +.+ ..+.+++|+....... ..+..... .... ...+          ....+.
T Consensus       111 ~~----~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----------~~~~~~  174 (993)
T KOG1983|consen  111 TG----VFLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLS----------PTLSIE  174 (993)
T ss_pred             ce----eecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeec----------cceeee
Confidence            21    122334444443332233 444 7788888887542211 01111000 0000 0000          001111


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      +.+         .+-.-.+|-+.    ..+ ..+..+..++.+..+......+ .+..-+.+.+|+... ......+.  
T Consensus       175 ~~~---------~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~--  236 (993)
T KOG1983|consen  175 GLV---------IDLDTVLISLP----DAY-LGLSLIEYESLQVLYYSPTKIL-IGFNRGLVVIKDRAS-KYVQSAYL--  236 (993)
T ss_pred             ccc---------cccccceeecc----ccc-ccccccccccceeeeecCCCcc-eeeeeeeeeehhccc-ccchhhcc--
Confidence            110         01111122221    011 2223344455555554333333 334455666666544 33222222  


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                         +....+++++..++++-.||.+.+||...+++
T Consensus       237 ---~~~~~~~~~~~~~v~~h~Dgs~~fWd~s~g~~  268 (993)
T KOG1983|consen  237 ---PNGQLESRDGSHFVSYHTDGSYAFWDVSSGKL  268 (993)
T ss_pred             ---cccccCccCCceEEEEEecCCEEeeecCCCce
Confidence               12222277888999999999999999988765

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=92.96  E-value=6.3  Score=35.01  Aligned_cols=182  Identities=10%  Similarity=0.023  Sum_probs=92.6

Q ss_pred             cEEEEEcCCCCcccccc------ccCCCeEEEEEec-cC----CEEE-EeeCCCeEEEEEcCCceeeeeeecccce---e
Q psy8152         108 DVKLWRYKTEPDQWTNF------NVGPQLECMKHNK-HS----NIIA-TGGKENDLKLWDLNTTKNIFSAKNVSHR---V  172 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~-~~----~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~---~  172 (444)
                      +|.+||+.+++.++++.      ...+.+..+.+.. ++    .+++ +-+..+-|.|+|+.+++.-+.+..+...   .
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~  114 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA  114 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred             EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence            56667777766554211      1345677788876 22    2333 3333468999999998765544332210   0


Q ss_pred             eEeeeCCCcccccCccceeEEEEec---CCCEEEEEeCCceEEEEEcCC----CC-C------ccceEEEeCCCCCeeEE
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLP---NSDKVAVCSKQGYVRVYDPKI----TT-Q------RRPVLKVDIPDVALSCI  238 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~----~~-~------~~~~~~~~~~~~~i~~~  238 (444)
                      ..+..  .+........+..++.+|   +++.|.-....+ -++|.+.+    .. .      ...+..+-........+
T Consensus       115 ~~~~i--~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~  191 (287)
T PF03022_consen  115 GPFTI--GGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGM  191 (287)
T ss_dssp             EEEEE--TTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEE
T ss_pred             cceec--cCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCccccccccccccceeccccCCCCceE
Confidence            11111  111222233477888876   556676555433 22333321    00 0      11122221112356788


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCc--ceeEec--cc-cCceeEEEecC--CCCEEEE
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGK--PCYKYK--GF-AGCVKDIACPL--NENLILS  292 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~--~h-~~~i~~~~~s~--~~~~l~s  292 (444)
                      +++++|.++++--..+.|..|+...+..  .+..+.  .. -..+.++.+.+  +|.+.+.
T Consensus       192 ~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~  252 (287)
T PF03022_consen  192 AIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVL  252 (287)
T ss_dssp             EEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEE
T ss_pred             EECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEE
Confidence            9999999999998999999999875211  122222  11 34667788877  5554443

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>KOG1900|consensus

Probab=92.76  E-value=1.8  Score=45.27  Aligned_cols=145  Identities=18%  Similarity=0.347  Sum_probs=87.0

Q ss_pred             eCCCeEEEEEcCCceeeeeeecccceeeEeee---CCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC----
Q psy8152         146 GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSV---KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI----  218 (444)
Q Consensus       146 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~----  218 (444)
                      +.|+.+.+|+..++.....+.+..+.+..+.+   .|.             .|.|.=+++++.+.--.|.++-+..    
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpg-------------vFv~~IqhlLvvaT~~ei~ilgV~~~~~~  162 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPG-------------VFVPEIQHLLVVATPVEIVILGVSFDEFT  162 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCC-------------cchhhhheeEEecccceEEEEEEEecccc
Confidence            34788999999997777777777764444332   221             1223224444444444555554430    


Q ss_pred             CCCc--cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC----CC--Cc-----------------ceeEec-
Q psy8152         219 TTQR--RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR----GK--GK-----------------PCYKYK-  272 (444)
Q Consensus       219 ~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~--~~-----------------~~~~~~-  272 (444)
                      ....  ....++......|+++....+|+.+++| .||.|  |.+.    ..  ++                 .+..+. 
T Consensus       163 ~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G-~dg~l--yEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~  239 (1311)
T KOG1900|consen  163 GELSIFNTSFKISVDGVSVNCITYTENGRIFFAG-RDGNL--YELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPG  239 (1311)
T ss_pred             CcccccccceeeecCCceEEEEEeccCCcEEEee-cCCCE--EEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCC
Confidence            0000  0112333445668899988888877766 55544  4331    10  00                 112233 


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      .+..+|..+......+.|.+-+..|+|.+|++..
T Consensus       240 ~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  240 SSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             CCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence            4567999999988888999999999999999977

>KOG4460|consensus

Probab=92.54  E-value=3.1  Score=39.15  Aligned_cols=82  Identities=13%  Similarity=0.130  Sum_probs=53.8

Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEE---E--------eCCCCCeeEEEEccCC---CEE
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLK---V--------DIPDVALSCITTTNQS---HYV  247 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~---~--------~~~~~~i~~~~~~~~~---~~l  247 (444)
                      ..|..+..++.|..++..+.+|.+.++=.+.      -..++++..   +        ....-.+..++|+|+.   ..|
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL  183 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL  183 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence            3588899999999999999998776654220      011221111   1        1122345678999974   677


Q ss_pred             EEEcCCCcEEEEEcCCCCcceeE
Q psy8152         248 IVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       248 ~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      ..-+.|+.||+|++.. ...++.
T Consensus       184 ~iL~sdnviRiy~lS~-~telyl  205 (741)
T KOG4460|consen  184 VLLTSDNVIRIYSLSE-PTELYL  205 (741)
T ss_pred             EEEecCcEEEEEecCC-cchhhc
Confidence            7788899999999987 444443

>KOG1896|consensus

Probab=92.46  E-value=12  Score=39.26  Aligned_cols=184  Identities=11%  Similarity=0.081  Sum_probs=93.5

Q ss_pred             CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-----cCCcEEEEEEc---------CCeEEEEeCC-----C
Q psy8152          14 STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-----VEESELLIAYS---------GQKIKIYDTD-----F   74 (444)
Q Consensus        14 ~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~~l~~~~~---------d~~i~vw~~~-----~   74 (444)
                      ....|.+.+..+.+.+.+  -.++...|-..+..+...-     ....+|++|..         -|.+.||++-     -
T Consensus      1002 ~~f~i~LisP~sw~vi~~--iefq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPep 1079 (1366)
T KOG1896|consen 1002 EQFSIQLISPESWEVIDK--IEFQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEP 1079 (1366)
T ss_pred             ccceeEEecCCccccccc--cccCccceeeEEEEEEEEecccccCCcceEEEEEeecccccccCcccEEEEEEEEecCCC
Confidence            344556666555553211  2233334444444443321     11357887754         3899999963     2


Q ss_pred             Cccc-----cceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcC-CCCccccccccCCCeEEEEEeccCCEEEEeeCC
Q psy8152          75 KNFN-----TNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK-TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE  148 (444)
Q Consensus        75 ~~~~-----~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  148 (444)
                      ++..     +.+-.....++|.+++--..+|+++ ...+|.||.++ ....+..-+ -.-++.-....-=.++|+.|.--
T Consensus      1080 gkP~t~~KlKel~~eE~KGtVsavceV~G~l~~~-~GqKI~v~~l~r~~~ligVaF-iD~~~yv~s~~~vknlIl~gDV~ 1157 (1366)
T KOG1896|consen 1080 GKPFTKNKLKELYIEEQKGTVSAVCEVRGHLLSS-QGQKIIVRKLDRDSELIGVAF-IDLPLYVHSMKVVKNLILAGDVM 1157 (1366)
T ss_pred             CCCcccceeeeeehhhcccceEEEEEeccEEEEc-cCcEEEEEEeccCCcceeeEE-eccceeEEehhhhhhheehhhhh
Confidence            3222     2222234477888887655556654 34489999994 444432111 11122222222224555555555


Q ss_pred             CeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC--CEEEEEeCCceEEEEEcC
Q psy8152         149 NDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS--DKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       149 ~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~  217 (444)
                      ..|.+.-.... ..+..+.....                +-.++++.|.-+|  -.++++..++.|++|-..
T Consensus      1158 ksisfl~fqeep~rlsL~srd~~----------------~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~ 1213 (1366)
T KOG1896|consen 1158 KSISFLGFQEEPYRLSLLSRDFE----------------PLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYA 1213 (1366)
T ss_pred             hceEEEEEccCceEEEEeecCCc----------------hhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeC
Confidence            55555444331 11111111111                1248888888777  467788889999988765

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=92.38  E-value=9.4  Score=35.56  Aligned_cols=94  Identities=14%  Similarity=0.014  Sum_probs=42.2

Q ss_pred             CcEEEEEE-cCCeEEEEeCCC--Cccccceeecc-ccccEEEEEeCCCeEEEEecCC-----------cEEEEEcCCCCc
Q psy8152          55 ESELLIAY-SGQKIKIYDTDF--KNFNTNTDVSF-GEGDIVGVSRYDECILTAVKSG-----------DVKLWRYKTEPD  119 (444)
Q Consensus        55 ~~~l~~~~-~d~~i~vw~~~~--~~~~~~~~~~~-~~~~v~~~s~~~~~l~~~~~dg-----------~i~iw~~~~~~~  119 (444)
                      +...+.++ ....+.++|+..  ......-..+. ..........++.+++.|+...           .+..||..+.+.
T Consensus        39 ~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~~~p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W  118 (376)
T PRK14131         39 NTVYVGLGSAGTSWYKLDLNAPSKGWTKIAAFPGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSW  118 (376)
T ss_pred             CEEEEEeCCCCCeEEEEECCCCCCCeEECCcCCCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEE
Confidence            44444444 345677777753  22221111111 0111222345666777776532           466778766543


Q ss_pred             cccccccCCCeE-EEEEe-ccCCEEEEeeCC
Q psy8152         120 QWTNFNVGPQLE-CMKHN-KHSNIIATGGKE  148 (444)
Q Consensus       120 ~~~~~~~~~~v~-~~~~~-~~~~~l~~~~~d  148 (444)
                      ............ ..+.. .++++.+.|+.+
T Consensus       119 ~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~  149 (376)
T PRK14131        119 QKLDTRSPVGLAGHVAVSLHNGKAYITGGVN  149 (376)
T ss_pred             EeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence            321111111111 11222 367778888754

>PLN02193 nitrile-specifier protein

Probab=92.34  E-value=11  Score=36.31  Aligned_cols=63  Identities=8%  Similarity=-0.080  Sum_probs=31.9

Q ss_pred             CCCEEEEEeCCc-----eEEEEEcCCCCCccceEEE---eCCCCCeeEEEEccCCCEEEEEcCC----CcEEEEEcCC
Q psy8152         198 NSDKVAVCSKQG-----YVRVYDPKITTQRRPVLKV---DIPDVALSCITTTNQSHYVIVGSTT----GDMMAVDLRG  263 (444)
Q Consensus       198 ~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~  263 (444)
                      ++++++.|+.++     .+..||+. +.....+...   ...... ..++. -++++++.++.+    ..+.+||+.+
T Consensus       278 ~~~iYv~GG~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~~~~R~~-~~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t  352 (470)
T PLN02193        278 EENVYVFGGVSATARLKTLDSYNIV-DKKWFHCSTPGDSFSIRGG-AGLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQ  352 (470)
T ss_pred             CCEEEEECCCCCCCCcceEEEEECC-CCEEEeCCCCCCCCCCCCC-cEEEE-ECCcEEEEECCCCCccCceEEEECCC
Confidence            456677776543     46778876 2222211110   001111 12222 256677777655    4588999887

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=92.33  E-value=15  Score=37.79  Aligned_cols=67  Identities=13%  Similarity=0.063  Sum_probs=48.6

Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe----c-----------c----ccCceeEEEecCCCCEEEEE
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY----K-----------G----FAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~-----------~----h~~~i~~~~~s~~~~~l~s~  293 (444)
                      ..|.++....-+.+|+....||+|.++|..+ .+.+...    .           |    +-.++..++|||.+..++.-
T Consensus       260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t-~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~  338 (753)
T PF11635_consen  260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNT-MKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI  338 (753)
T ss_pred             CeEEEEEecccCcEEEEEEcCCeEEEEecCc-chhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence            4566676666778899999999999999887 5444333    1           1    11134457899999989988


Q ss_pred             ECCCcEE
Q psy8152         294 SLDRHFR  300 (444)
Q Consensus       294 ~~dg~i~  300 (444)
                      ..+|.+.
T Consensus       339 ~~~~~~~  345 (753)
T PF11635_consen  339 DEDGKTK  345 (753)
T ss_pred             ecCCCce
Confidence            8888865

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=92.27  E-value=0.8  Score=42.06  Aligned_cols=167  Identities=11%  Similarity=0.067  Sum_probs=95.6

Q ss_pred             cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee-eeeecccceeeEeeeCCCcccccCcccee-EEEEecCCCEEE
Q psy8152         126 VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVN-GISFLPNSDKVA  203 (444)
Q Consensus       126 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~  203 (444)
                      ....|..+-..|+++.|+.-+. ..+.++++.+.... .++-..         +|.  +  ....|+ ++.....|.-++
T Consensus       219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~d---------spg--~--~~~~Vte~l~lL~Gg~SLL  284 (733)
T COG4590         219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDD---------SPG--D--SRHQVTEQLYLLSGGFSLL  284 (733)
T ss_pred             CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhc---------CCC--c--hHHHHHHHHHHHhCceeEE
Confidence            4567788889999998887665 68889988763321 111100         111  0  001122 222233456778


Q ss_pred             EEeCCceEEEE-EcCCCCCc--cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE
Q psy8152         204 VCSKQGYVRVY-DPKITTQR--RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD  280 (444)
Q Consensus       204 ~~~~d~~i~i~-d~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~  280 (444)
                      +++.||-|.-| |.+.....  ..++.++....++..+.--.+.+-+++-+..|++.++.... .+++-. ......+.-
T Consensus       285 v~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~-~~~lL~-~~~~~~~~~  362 (733)
T COG4590         285 VVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTS-EKLLLF-ERAYQAPQL  362 (733)
T ss_pred             EEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeeccc-Ccceeh-hhhhcCcce
Confidence            88889988776 55522221  12222222233333333222345677788888888887554 333322 222235667


Q ss_pred             EEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         281 IACPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       281 ~~~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      +++||.+.+|++- ..|.|+++.+.+..+
T Consensus       363 ~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P  390 (733)
T COG4590         363 VAMSPNQAYLLSE-DQGKIRLAQLENRNP  390 (733)
T ss_pred             eeeCcccchheee-cCCceEEEEecCCCC
Confidence            8999999988874 457799998877543

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=92.04  E-value=1.1  Score=25.96  Aligned_cols=40  Identities=10%  Similarity=0.021  Sum_probs=29.1

Q ss_pred             CCCCEEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEE
Q psy8152         285 LNENLILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILV  324 (444)
Q Consensus       285 ~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~  324 (444)
                      |++++|+++. .+++|.++|..+++.+.++........++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            5677666554 578999999999988888776555555554

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=91.31  E-value=5.2  Score=30.41  Aligned_cols=121  Identities=11%  Similarity=0.117  Sum_probs=66.3

Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec---C--CCEEEEEe
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP---N--SDKVAVCS  206 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~--~~~l~~~~  206 (444)
                      .-.|......|+.++.-|+|.|++..........  ....+..+.+         ...|++++-.|   +  ...|+.|+
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~--~~~~i~~LNi---------n~~italaaG~l~~~~~~D~LliGt   71 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR--QDSDISFLNI---------NQEITALAAGRLKPDDGRDCLLIGT   71 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCcccccccc--ccCceeEEEC---------CCceEEEEEEecCCCCCcCEEEEec
Confidence            3456555567888888899999987653221110  1122222222         22478887554   2  25666666


Q ss_pred             CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc----CCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         207 KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN----QSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       207 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      . ..|..||+.   ...-++.- .-...+.++.+-.    ...++++| .+..|.-||..- .+...+
T Consensus        72 ~-t~llaYDV~---~N~d~Fyk-e~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G-~e~fWt  132 (136)
T PF14781_consen   72 Q-TSLLAYDVE---NNSDLFYK-EVPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEG-NEIFWT  132 (136)
T ss_pred             c-ceEEEEEcc---cCchhhhh-hCccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCC-cEEEEE
Confidence            5 578899998   44333322 2234567776632    23344444 455677777654 444433

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=91.06  E-value=21  Score=36.92  Aligned_cols=115  Identities=14%  Similarity=0.157  Sum_probs=70.1

Q ss_pred             ceeEEEEecCC-CEEEEEeCCceEEEEEcCC-CCCccceEEEe-CCC----------CCeeEEEEccCCCEEEEEcCCCc
Q psy8152         189 WVNGISFLPNS-DKVAVCSKQGYVRVYDPKI-TTQRRPVLKVD-IPD----------VALSCITTTNQSHYVIVGSTTGD  255 (444)
Q Consensus       189 ~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~-~~~----------~~i~~~~~~~~~~~l~~~~~dg~  255 (444)
                      +...++|+|.. ..||+....|...||++.. .........+. ...          ..-..+.|.++.+.|++++.. .
T Consensus       147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-~  225 (765)
T PF10214_consen  147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-K  225 (765)
T ss_pred             ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-c
Confidence            57789999876 7899999999999999920 11111111111 111          223478898887778777544 5


Q ss_pred             EEEEEcCCCCcceeEe--ccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCC
Q psy8152         256 MMAVDLRGKGKPCYKY--KGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~--~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~  306 (444)
                      +.++|+.+ ......+  ......|..+.-+|... +++.- ....|...++..
T Consensus       226 l~~~d~~~-~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~  277 (765)
T PF10214_consen  226 LMLIDFES-NWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS  277 (765)
T ss_pred             eEEEECCC-CCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence            88999988 5442212  22445788888877632 22222 224566666655

These proteins are found in fungi.

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=90.90  E-value=9.9  Score=32.89  Aligned_cols=196  Identities=12%  Similarity=-0.013  Sum_probs=118.7

Q ss_pred             cEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee-eeeeec
Q psy8152          89 DIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN-IFSAKN  167 (444)
Q Consensus        89 ~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~  167 (444)
                      ...+.+++|..-+++...+.|--.|..+++....-++....-..+..-|++..-++-+.. -|.-.|-++... .+.+..
T Consensus        65 ~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp~  143 (353)
T COG4257          65 FDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLPL  143 (353)
T ss_pred             cccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeeccc
Confidence            344557788888888888888888888888776556666666777888877766654433 454455544321 122221


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-CCCeeEEEEccCCCE
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-DVALSCITTTNQSHY  246 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~  246 (444)
                      ...                ........|.+.|++-+++.. |.---.|.    ....+..+... ...-..|+..|+|..
T Consensus       144 ~~a----------------~~nlet~vfD~~G~lWFt~q~-G~yGrLdP----a~~~i~vfpaPqG~gpyGi~atpdGsv  202 (353)
T COG4257         144 EHA----------------DANLETAVFDPWGNLWFTGQI-GAYGRLDP----ARNVISVFPAPQGGGPYGICATPDGSV  202 (353)
T ss_pred             ccC----------------CCcccceeeCCCccEEEeecc-ccceecCc----ccCceeeeccCCCCCCcceEECCCCcE
Confidence            111                123677889999888777652 21111111    22333333322 234577899999998


Q ss_pred             EEEEcCCCcEEEEEcCCCCcceeEec---cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         247 VIVGSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      -++.-.++.|-..|... +. -..+.   ........+--+|.++.-++-...+.++.||-....
T Consensus       203 wyaslagnaiaridp~~-~~-aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s  265 (353)
T COG4257         203 WYASLAGNAIARIDPFA-GH-AEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS  265 (353)
T ss_pred             EEEeccccceEEccccc-CC-cceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc
Confidence            88877778888888776 42 22222   212233455556778877777777777777765533

>KOG1900|consensus

Probab=90.85  E-value=4.5  Score=42.57  Aligned_cols=151  Identities=13%  Similarity=0.099  Sum_probs=81.7

Q ss_pred             EcCCeEEEEeCCCCccccceeeccccccEEEE-EeCC-------CeEEEEecCCcEEEEEcCCCCccc---ccc------
Q psy8152          62 YSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV-SRYD-------ECILTAVKSGDVKLWRYKTEPDQW---TNF------  124 (444)
Q Consensus        62 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~-s~~~-------~~l~~~~~dg~i~iw~~~~~~~~~---~~~------  124 (444)
                      +.|+.+.+|+..++.....+....|..--..+ -|..       ++++..+.--.|.++-+.-.+...   .+.      
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~  175 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS  175 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence            45789999999987777766544443322332 2321       344444444567776543222111   111      


Q ss_pred             ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-------ceeeeeeecccceeeEeeeCCC--cccccCccceeEEEE
Q psy8152         125 NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-------TKNIFSAKNVSHRVLVYSVKPD--EFDLRRPVWVNGISF  195 (444)
Q Consensus       125 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~  195 (444)
                      -.+..|+|+....+|+.+++|- ||  .+|.+.-       ++...++-...+  ....+.|.  ........+|..++.
T Consensus       176 ~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s--~ls~lvPs~~~~~~~~~dpI~qi~I  250 (1311)
T KOG1900|consen  176 VDGVSVNCITYTENGRIFFAGR-DG--NLYELVYQAEDGWFGSRCRKICLTKS--VLSSLVPSLLSVPGSSKDPIRQITI  250 (1311)
T ss_pred             cCCceEEEEEeccCCcEEEeec-CC--CEEEEEEeccCchhhcccccccCchh--HHHHhhhhhhcCCCCCCCcceeeEe
Confidence            1255688888776887776655 55  4444321       110111000000  00001111  011223447999999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcC
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      ....+.+.+-+..|+|.+|++.
T Consensus       251 D~SR~IlY~lsek~~v~~Y~i~  272 (1311)
T KOG1900|consen  251 DNSRNILYVLSEKGTVSAYDIG  272 (1311)
T ss_pred             ccccceeeeeccCceEEEEEcc
Confidence            8777889999999999999998

>KOG2038|consensus

Probab=90.84  E-value=0.21  Score=48.59  Aligned_cols=10  Identities=20%  Similarity=0.112  Sum_probs=5.0

Q ss_pred             cccCCCcccc
Q psy8152         350 EKYDPEHFEM  359 (444)
Q Consensus       350 ~~W~~~~~~~  359 (444)
                      .||....+..
T Consensus       839 el~~~~~~~~  848 (988)
T KOG2038|consen  839 ELWRFEDGSL  848 (988)
T ss_pred             HHHHhcCCcC
Confidence            4565554433

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=90.82  E-value=11  Score=33.43  Aligned_cols=62  Identities=10%  Similarity=0.040  Sum_probs=37.9

Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CC-CCCeeEEEEcc--CCCEEEEE
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IP-DVALSCITTTN--QSHYVIVG  250 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~-~~~i~~~~~~~--~~~~l~~~  250 (444)
                      ....+++.++|.++++--..+.|..|+..+.-....+..+.  .. -..+..+.+.+  +|.+.+..
T Consensus       187 ~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s  253 (287)
T PF03022_consen  187 QSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS  253 (287)
T ss_dssp             SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred             CCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence            35678899999999898999999999988111111122221  11 34567888877  55544433

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>KOG1898|consensus

Probab=90.60  E-value=24  Score=36.72  Aligned_cols=82  Identities=15%  Similarity=0.074  Sum_probs=50.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-----cCCcEEEEEEcCCeEEEEeCCCCcccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-----VEESELLIAYSGQKIKIYDTDFKNFNT   79 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~~l~~~~~d~~i~vw~~~~~~~~~   79 (444)
                      +..+|+++-..|.+..+....... ...+..-.  .-...|.|+++.+     ...++++.|+.|+.++++.+....++.
T Consensus       548 nr~qiVvalSngelvyfe~d~sgq-l~E~~er~--tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~  624 (1205)
T KOG1898|consen  548 NRRQIVVALSNGELVYFEGDVSGQ-LNEFTERV--TLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQ  624 (1205)
T ss_pred             cceEEEEEccCCeEEEEEeccCcc-ceeeeeee--eeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEE
Confidence            445667777777766666542221 22222111  3357788999873     123679999999999999988666666


Q ss_pred             ceeecccccc
Q psy8152          80 NTDVSFGEGD   89 (444)
Q Consensus        80 ~~~~~~~~~~   89 (444)
                      .+...+-..+
T Consensus       625 ~ls~q~l~~~  634 (1205)
T KOG1898|consen  625 PLSVQGLSSP  634 (1205)
T ss_pred             EccccccCCC
Confidence            5544333333

>PF02724 CDC45: CDC45-like protein; InterPro: IPR003874 CDC45 is an essential gene required for initiation of DNA replication in Saccharomyces cerevisiae (cell division control protein 45), forming a complex with MCM5/CDC46

Probab=90.50  E-value=0.2  Score=49.59  Aligned_cols=10  Identities=20%  Similarity=0.212  Sum_probs=5.5

Q ss_pred             CCCccccCCC
Q psy8152         346 GDSDEKYDPE  355 (444)
Q Consensus       346 d~~i~~W~~~  355 (444)
                      .+.|.+|+-.
T Consensus        96 ~~~v~v~ddg  105 (622)
T PF02724_consen   96 NDQVIVFDDG  105 (622)
T ss_pred             CCcEEEEECC
Confidence            4456666543

Homologs of CDC45 have been identified in human [], mouse and the smut fungus, Melampsora spp., (tsd2 protein) among others.; GO: 0006270 DNA-dependent DNA replication initiation

>KOG2063|consensus

Probab=90.38  E-value=18  Score=37.23  Aligned_cols=66  Identities=9%  Similarity=0.110  Sum_probs=38.1

Q ss_pred             CCcEEEEEEcCCeEEEEeCCCCccccc---------eeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          54 EESELLIAYSGQKIKIYDTDFKNFNTN---------TDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~---------~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      .++.|+.|+.+|.+++|.+........         +....+..+|..+  .+.-. ++..-.++.|.++.+...+..
T Consensus        25 ~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~-~ll~l~dsqi~~~~l~~~~~~  101 (877)
T KOG2063|consen   25 YGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLE-LLLILSDSQIAVHKLPELEPV  101 (877)
T ss_pred             hCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhc-chheecCCcceeeecCccccc
Confidence            489999999999999999864422111         1111113444433  22222 233345677888887766553

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=90.30  E-value=1.5  Score=40.34  Aligned_cols=160  Identities=9%  Similarity=0.091  Sum_probs=91.4

Q ss_pred             EEEeCCCeEEEEecCCcEEEEEcCCCCccc-ccccc-CC----CeE-EEEEeccCCEEEEeeCCCeEEEE-EcCCc-eee
Q psy8152          92 GVSRYDECILTAVKSGDVKLWRYKTEPDQW-TNFNV-GP----QLE-CMKHNKHSNIIATGGKENDLKLW-DLNTT-KNI  162 (444)
Q Consensus        92 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~-~~----~v~-~~~~~~~~~~l~~~~~d~~i~vw-d~~~~-~~~  162 (444)
                      -+.|+|+.+..-+. .++.++++.+..... ++... .+    .|+ .+.....+.-|+.++.||.|.-| |++.+ ++.
T Consensus       227 lL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~p~  305 (733)
T COG4590         227 LLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQPH  305 (733)
T ss_pred             EECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecCCCCc
Confidence            34799998777665 688899887654332 11111 11    122 12222356668888889988876 55442 211


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      .      +.++..++.|.        .+..+.--.+.+-+++-+..|++.++...   ..+++..-. --..+.-+++||
T Consensus       306 l------~h~R~f~l~pa--------~~~~l~pe~~rkgF~~l~~~G~L~~f~st---~~~~lL~~~-~~~~~~~~~~Sp  367 (733)
T COG4590         306 L------NHIRNFKLAPA--------EVQFLLPETNRKGFYSLYRNGTLQSFYST---SEKLLLFER-AYQAPQLVAMSP  367 (733)
T ss_pred             c------eeeeccccCcc--------cceeeccccccceEEEEcCCCceeeeecc---cCcceehhh-hhcCcceeeeCc
Confidence            1      11111222221        23333322233667778888888888766   444443222 223567889999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      .+.+|++- ..|.|+++.+.+ ..+-.++.
T Consensus       368 ~~~~Ll~e-~~gki~~~~l~N-r~Peisws  395 (733)
T COG4590         368 NQAYLLSE-DQGKIRLAQLEN-RNPEISWS  395 (733)
T ss_pred             ccchheee-cCCceEEEEecC-CCCCccHH
Confidence            99998865 456799999988 55554444

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=90.14  E-value=7.5  Score=36.89  Aligned_cols=104  Identities=8%  Similarity=0.068  Sum_probs=59.2

Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-----CCCCCeeEEEEccCC------CEEEEEc-------
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-----IPDVALSCITTTNQS------HYVIVGS-------  251 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~------~~l~~~~-------  251 (444)
                      .+.|+|.|++++|++--..|.|++++.. ......+..+.     ........|+|+|+-      .+|++..       
T Consensus        32 Pw~maflPDG~llVtER~~G~I~~v~~~-~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~  110 (454)
T TIGR03606        32 PWALLWGPDNQLWVTERATGKILRVNPE-TGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDK  110 (454)
T ss_pred             ceEEEEcCCCeEEEEEecCCEEEEEeCC-CCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCC
Confidence            7889999999877765546999999865 12222222111     135667899999874      3444432       


Q ss_pred             ---CCCcEEEEEcCCC-C-----cc-eeEec---cccCceeEEEecCCCCEEEEEECC
Q psy8152         252 ---TTGDMMAVDLRGK-G-----KP-CYKYK---GFAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       252 ---~dg~i~iwd~~~~-~-----~~-~~~~~---~h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                         ....|.-|.+... .     +. +..++   .|.  -..|+|.|+|.++++.+..
T Consensus       111 ~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       111 ELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             CccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence               1223444544310 0     11 11121   233  3567899999877766554

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=89.84  E-value=3.5  Score=33.40  Aligned_cols=32  Identities=9%  Similarity=0.030  Sum_probs=26.4

Q ss_pred             CceeEEEecCCC------CEEEEEECCCcEEEEEcCCC
Q psy8152         276 GCVKDIACPLNE------NLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       276 ~~i~~~~~s~~~------~~l~s~~~dg~i~vw~~~~~  307 (444)
                      ..|.+++|||.|      .+|++.+.++.|.||.....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~  123 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGN  123 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCC
Confidence            378899999954      38899999999999987643

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=89.29  E-value=11  Score=33.32  Aligned_cols=119  Identities=8%  Similarity=0.099  Sum_probs=0.0

Q ss_pred             EEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152         109 VKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       109 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      |++||..+.+....-..-.+.|+.+.|..+.++++.|.      ....+..||+.+..-...-.+...            
T Consensus        18 lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~------------   85 (281)
T PF12768_consen   18 LCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSN------------   85 (281)
T ss_pred             EEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccc------------


Q ss_pred             cccCccceeEEEEecCC--CEEEEEe-CCceEEEEEcCCCCCccceEE-EeCCCCCeeEEEEcc
Q psy8152         183 DLRRPVWVNGISFLPNS--DKVAVCS-KQGYVRVYDPKITTQRRPVLK-VDIPDVALSCITTTN  242 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~--~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~  242 (444)
                        ..+.+|..+.+....  ++.+.|. .++...|.... ..+...+.. .......|..+.+-|
T Consensus        86 --~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~d-Gs~W~~i~~~~~~~~t~I~~l~~~~  146 (281)
T PF12768_consen   86 --SIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYD-GSSWSSIGSDILGSGTTIRGLQVLP  146 (281)
T ss_pred             --cCCCcEEEEEeeccCCceEEEeceecCCCceEEEEc-CCceEeccccccCCCCEEEEEEEEe

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=89.23  E-value=13  Score=31.88  Aligned_cols=188  Identities=14%  Similarity=0.129  Sum_probs=0.0

Q ss_pred             EEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152         101 LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       101 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (444)
                      +.-...++|.++|-..-........+..    +...+..+.+...+ --.-.+||+.+++.........-          
T Consensus         3 ~~~~~~~~v~~~d~t~~g~s~~~~~~~~----c~~~~~~~~~~~d~-~a~s~~yD~~tn~~rpl~v~td~----------   67 (243)
T PF07250_consen    3 MALLHNNKVIMFDRTNFGPSNISLPDGR----CRDNPEDNALKFDG-PAHSVEYDPNTNTFRPLTVQTDT----------   67 (243)
T ss_pred             EeEccCCEEEEEeCCCcccccccCCCCc----cccCccccccccCc-eEEEEEEecCCCcEEeccCCCCC----------


Q ss_pred             cccccCccceeEEEEecCCCEEEEEeC---CceEEEEEcCC---CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152         181 EFDLRRPVWVNGISFLPNSDKVAVCSK---QGYVRVYDPKI---TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                              ++.+-++.|+|++|.+|+.   ...+++++...   ...............+-.++..-|+|+.|+.|+...
T Consensus        68 --------FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~  139 (243)
T PF07250_consen   68 --------FCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNN  139 (243)
T ss_pred             --------cccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCC


Q ss_pred             -cEEEEEcCCCCcceeEe--------ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe
Q psy8152         255 -DMMAVDLRGKGKPCYKY--------KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       255 -~i~iwd~~~~~~~~~~~--------~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                       +..+|...........+        .....-=-.+...|+|++++.+..+..|.  |..+.+.++.+
T Consensus       140 ~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~--d~~~n~v~~~l  205 (243)
T PF07250_consen  140 PTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIY--DYKTNTVVRTL  205 (243)
T ss_pred             CcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEE--eCCCCeEEeeC

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>KOG0943|consensus

Probab=89.20  E-value=0.35  Score=49.61  Aligned_cols=85  Identities=14%  Similarity=0.321  Sum_probs=0.0

Q ss_pred             CCCccccccccccccccccCCCCCCCCCCcccccccccccCccccccCCccCccccccccccccccCCCCcchhcccccc
Q psy8152         353 DPEHFEMNQVTRENYAESKTNKNTSDYDDESDIEIVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEED  432 (444)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed~~ee~~e~~~~~~~~~~~d~~~~e~~~~  432 (444)
                      ++.++...+++.++........+....-.+.+....++.-+++.+++++++++.|+++++.++.+.+.+.+-.+..++|+
T Consensus      1698 ~iptprrrrllsgnttndtnaDnEEregq~~ef~GEed~~Dddnddddddd~EaEdddDddDdDdeD~d~~aea~aEdEe 1777 (3015)
T KOG0943|consen 1698 DIPTPRRRRLLSGNTTNDTNADNEEREGQEGEFAGEEDHHDDDNDDDDDDDAEAEDDDDDDDDDDEDMDLDAEAAAEDEE 1777 (3015)
T ss_pred             cCCCchhhhhccCCccCccccchhhhcCCcccccCcccccccccccccccchhhccccccccccccccccchhhhhcccc


Q ss_pred             cCcCC
Q psy8152         433 DGESD  437 (444)
Q Consensus       433 d~~~~  437 (444)
                      |+|+|
T Consensus      1778 ~eEgd 1782 (3015)
T KOG0943|consen 1778 DEEGD 1782 (3015)
T ss_pred             ccccc

>PTZ00415 transmission-blocking target antigen s230; Provisional

Probab=89.15  E-value=0.3  Score=51.88  Aligned_cols=56  Identities=36%  Similarity=0.528  Sum_probs=0.0

Q ss_pred             ccccccCccccccCCccCccccccccccccccCCCCcchhcccccccCcCCCCCCC
Q psy8152         387 IVDEIDNDEDKQDESEEDGEEEGEEEASENEYYTETDEDEKENEEDDGESDGGRRR  442 (444)
Q Consensus       387 ~~~~~~~~~~~~~~~~ed~~ee~~e~~~~~~~~~~~d~~~~e~~~~d~~~~~~~~~  442 (444)
                      ++|++++++++++++++|++|+++++++-..+.+|+++++..++---+.+..++-+
T Consensus       152 ~~d~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~de~~~~~~ge~~~~~~~~~~~~d  207 (2849)
T PTZ00415        152 VIDDDDEDEDEDDDDEEDDEEEEEEEEEIKGFDDEDEEDEGGEDFTYEKSEVDKTD  207 (2849)
T ss_pred             ccCCccccccccccccccccccccccccccCCCchhccCCCCcccccccccccccc

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=89.13  E-value=2.3  Score=41.94  Aligned_cols=72  Identities=11%  Similarity=0.214  Sum_probs=0.0

Q ss_pred             cCCCEEEEEcCCCcEEEEEcCC---CCcceeEeccccC----------------------ceeEEEecC----CCCEEEE
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRG---KGKPCYKYKGFAG----------------------CVKDIACPL----NENLILS  292 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~h~~----------------------~i~~~~~s~----~~~~l~s  292 (444)
                      ++...++.+..||.+.......   .+...........                      .+..+++++    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE


Q ss_pred             EECCCcEEEEEcCCCceEEEe
Q psy8152         293 VSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       293 ~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      .+.|+++|+|++.+++++...
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEe

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=88.96  E-value=17  Score=32.66  Aligned_cols=250  Identities=10%  Similarity=0.026  Sum_probs=0.0

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc---------
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF---------   77 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~---------   77 (444)
                      .+|+.|+.+|...+. +....      ..+....+..+|++|...+..+-+++.++....++++++..-..         
T Consensus        14 ~~lL~GTe~Gly~~~-~~~~~------~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~   86 (302)
T smart00036       14 KWLLVGTEEGLYVLN-ISDQP------GTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSAR   86 (302)
T ss_pred             cEEEEEeCCceEEEE-cccCC------CCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcc


Q ss_pred             -------ccceeeccccccEEEEE---eCCCeEEEEecCCcEEEEEcCCCCcccccccc--------CCCeEEEEEec--
Q psy8152          78 -------NTNTDVSFGEGDIVGVS---RYDECILTAVKSGDVKLWRYKTEPDQWTNFNV--------GPQLECMKHNK--  137 (444)
Q Consensus        78 -------~~~~~~~~~~~~v~~~s---~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--------~~~v~~~~~~~--  137 (444)
                             ...+   .+......+.   -....++++....+|.++..............        ..++..+..++  
T Consensus        87 ~~~~~~~~~~~---~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~  163 (302)
T smart00036       87 LVIRKNVLTKI---PDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSF  163 (302)
T ss_pred             ccccccceEeC---CcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccc


Q ss_pred             cCCEEEEeeCCCeEEEEEcCC--ceeeee-----eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce
Q psy8152         138 HSNIIATGGKENDLKLWDLNT--TKNIFS-----AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY  210 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  210 (444)
                      ....+..|+..+-..++++..  ......     ......                  ...++...+++.+|++  .+..
T Consensus       164 ~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~------------------~p~~i~~l~~~e~Llc--~~~~  223 (302)
T smart00036      164 ERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSL------------------KPISVVQVPRDEFLLC--YDEF  223 (302)
T ss_pred             cceEEEEEEcCCCCeEEEEeeccccccccccccccccccc------------------CceEEEEECCCeEEEE--ECcE


Q ss_pred             EEEEEcCCCCC-ccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCE
Q psy8152         211 VRVYDPKITTQ-RRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       211 i~i~d~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~  289 (444)
                      ..+-|..   . .......-.-.....++++  ...+|++-..++ |.|+++.+ +..++++.........+--+.++..
T Consensus       224 ~v~Vn~~---G~~~~r~~~l~w~~~p~~~~~--~~pyll~~~~~~-ievr~l~~-~~l~q~i~~~~~~~~r~L~~~~~~I  296 (302)
T smart00036      224 GVFVNLY---GKRRSRNPILHWEFMPESFAY--HSPYLLAFHDNG-IEIRSIKT-GELLQELADRETRKIRLLGSSDRKI  296 (302)
T ss_pred             EEEEeCC---CCccccceEEEcCCcccEEEE--ECCEEEEEcCCc-EEEEECCC-CceEEEEecCCCcceEEEecCCCeE


Q ss_pred             EEEE
Q psy8152         290 ILSV  293 (444)
Q Consensus       290 l~s~  293 (444)
                      +++.
T Consensus       297 ~~~s  300 (302)
T smart00036      297 LLSS  300 (302)
T ss_pred             EEEe

Unpublished observations.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=88.78  E-value=12  Score=30.89  Aligned_cols=173  Identities=14%  Similarity=0.100  Sum_probs=0.0

Q ss_pred             CCcEEEEEEc--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec-CCcEEEEEcCCCCccccccccCCCe
Q psy8152          54 EESELLIAYS--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYKTEPDQWTNFNVGPQL  130 (444)
Q Consensus        54 ~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~v  130 (444)
                      ++.++.+.+.  ...|++|++.+++.+....+......--.+..-+.++..-.. +|.-.++|..+.+++. .+...+.=
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg-~~~y~GeG  133 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELG-RFSYEGEG  133 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhc-ccccCCcc


Q ss_pred             EEEEEeccCCEEEEeeCCCeEEEEEcCC----ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe
Q psy8152         131 ECMKHNKHSNIIATGGKENDLKLWDLNT----TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS  206 (444)
Q Consensus       131 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  206 (444)
                      +.++.  ++..|+.+....+++.-|..+    .....+..+..-                 ..++.+.|- +|...|-.=
T Consensus       134 WgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv-----------------~~LNELE~V-dG~lyANVw  193 (262)
T COG3823         134 WGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPV-----------------SKLNELEWV-DGELYANVW  193 (262)
T ss_pred             eeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeec-----------------ccccceeee-ccEEEEeee


Q ss_pred             CCceEEEEEcCCCCCccceEEEe------------CCCCCeeEEEEccCC-CEEEEE
Q psy8152         207 KQGYVRVYDPKITTQRRPVLKVD------------IPDVALSCITTTNQS-HYVIVG  250 (444)
Q Consensus       207 ~d~~i~i~d~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~-~~l~~~  250 (444)
                      ....|...+..   +++.+..+.            .+..-.+.|++.|++ +++++|
T Consensus       194 ~t~~I~rI~p~---sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         194 QTTRIARIDPD---SGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             eecceEEEcCC---CCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=88.74  E-value=2  Score=42.33  Aligned_cols=77  Identities=8%  Similarity=0.098  Sum_probs=0.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCc--------------------ccceEEEeeecc----CCcEEE
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITN--------------------KASVLALNWGNV----EESELL   59 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h--------------------~~~v~~~~~~~~----~~~~l~   59 (444)
                      .+...++++..+|.|..............+.......+                    ...+..++++ .    +..+|+
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~  234 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVS-SSEINDDTFLF  234 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE------ETTTEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEe-cceeCCCCEEE


Q ss_pred             EEEcCCeEEEEeCCCCccccce
Q psy8152          60 IAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus        60 ~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +-+.|+++|+|++.+++++...
T Consensus       235 tl~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  235 TLSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             EEETTSEEEEEETTTTCEEEEE
T ss_pred             EEeCCCeEEEEECCCCeEEEEe

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=88.36  E-value=14  Score=30.88  Aligned_cols=149  Identities=9%  Similarity=0.088  Sum_probs=0.0

Q ss_pred             EEeccC-CEEEEeeCCCeEEEEEcC--CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce
Q psy8152         134 KHNKHS-NIIATGGKENDLKLWDLN--TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY  210 (444)
Q Consensus       134 ~~~~~~-~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  210 (444)
                      ++...+ ..|+.+...+.|.+|++.  ..+.+.++...+.                   |..+.++..|++|++--.+..
T Consensus        22 ~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~-------------------V~~l~y~~~GDYlvTlE~k~~   82 (215)
T PF14761_consen   22 AVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGR-------------------VLQLVYSEAGDYLVTLEEKNK   82 (215)
T ss_pred             eeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcchhh-------------------eeEEEeccccceEEEEEeecC


Q ss_pred             EE---------EEEcCCCCCccceEEEeCC---------------------CCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         211 VR---------VYDPKITTQRRPVLKVDIP---------------------DVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       211 i~---------i~d~~~~~~~~~~~~~~~~---------------------~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      ..         =|..........-..+.+|                     ..++.+++..|-.--|+.|+.+. +.||.
T Consensus        83 ~~~~~fvR~Y~NWr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~-l~lf~  161 (215)
T PF14761_consen   83 RSPVDFVRAYFNWRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNK-LVLFT  161 (215)
T ss_pred             CccceEEEEEEEhhhhcccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCE-EEEEE


Q ss_pred             cCCCCcc-----------eeEeccccCc-eeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         261 LRGKGKP-----------CYKYKGFAGC-VKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       261 ~~~~~~~-----------~~~~~~h~~~-i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +.. ...           ...+.-|.+- ...+++..+   .++...+-.++++.+..
T Consensus       162 l~~-~~~~~~~~~~lDFe~~l~~~~~~~~p~~v~ic~~---yiA~~s~~ev~Vlkl~~  215 (215)
T PF14761_consen  162 LKY-QTIQSEKFSFLDFERSLIDHIDNFKPTQVAICEG---YIAVMSDLEVLVLKLEQ  215 (215)
T ss_pred             EEE-EEEecccccEEechhhhhheecCceEEEEEEEee---EEEEecCCEEEEEEEeC

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=88.20  E-value=18  Score=32.01  Aligned_cols=213  Identities=9%  Similarity=0.015  Sum_probs=0.0

Q ss_pred             EEEeeeccCCcEEEEEEcCCeEEEEeCC-----CCccccceeeccccc-----cEEEEEeCC--------------CeEE
Q psy8152          46 LALNWGNVEESELLIAYSGQKIKIYDTD-----FKNFNTNTDVSFGEG-----DIVGVSRYD--------------ECIL  101 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~-----~~~~~~~~~~~~~~~-----~v~~~s~~~--------------~~l~  101 (444)
                      +.|+|+ |.+.+-++...-+...+|+..     .-.....+.++....     ..+.+-.++              ..++
T Consensus        26 WGia~~-p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi  104 (336)
T TIGR03118        26 WGLSYR-PGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL  104 (336)
T ss_pred             ceeEec-CCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE


Q ss_pred             EEecCCcEEEEEcCCCCc-------cccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCce-----------
Q psy8152         102 TAVKSGDVKLWRYKTEPD-------QWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTK-----------  160 (444)
Q Consensus       102 ~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~-----------  160 (444)
                      .++.+|+|.-|...-...       +.--.....--..+++..   ...+.++--..++|.+||-.-.+           
T Consensus       105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~  184 (336)
T TIGR03118       105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA  184 (336)
T ss_pred             EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC


Q ss_pred             --------eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC
Q psy8152         161 --------NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD  232 (444)
Q Consensus       161 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  232 (444)
                              .++.+...-.                   |+-..-.++.+.=+.+..-|.|-+||+.  +.......-.+.-
T Consensus       185 iPagyAPFnIqnig~~ly-------------------VtYA~qd~~~~d~v~G~G~G~VdvFd~~--G~l~~r~as~g~L  243 (336)
T TIGR03118       185 LPAGYAPFNVQNLGGTLY-------------------VTYAQQDADRNDEVAGAGLGYVNVFTLN--GQLLRRVASSGRL  243 (336)
T ss_pred             CCCCCCCcceEEECCeEE-------------------EEEEecCCcccccccCCCcceEEEEcCC--CcEEEEeccCCcc


Q ss_pred             CCeeEEEEcc------CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE
Q psy8152         233 VALSCITTTN------QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI  281 (444)
Q Consensus       233 ~~i~~~~~~~------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~  281 (444)
                      ...+.|+..|      .+.+|+----||+|..||..+ ++.+..+....+....+
T Consensus       244 NaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~s-G~~~g~L~~~~G~pi~i  297 (336)
T TIGR03118       244 NAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQS-GAQLGQLLDPDNHPVKV  297 (336)
T ss_pred             cCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCC-CceeeeecCCCCCeEEe

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PRK05560 DNA gyrase subunit A; Validated

Probab=88.04  E-value=36  Score=35.37  Aligned_cols=234  Identities=12%  Similarity=0.056  Sum_probs=0.0

Q ss_pred             cCCcEEEEEEcCCeEEEEeC-------CCCccccceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcCCCCccc---
Q psy8152          53 VEESELLIAYSGQKIKIYDT-------DFKNFNTNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYKTEPDQW---  121 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~-------~~~~~~~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~~~~~~~---  121 (444)
                      ++...+++-+.+|.|+--.+       ..+.-...+...........+ ......|+..+..|.+.......-....   
T Consensus       496 ~~E~v~vllS~~GyIKri~~~~~~~~~~~~~g~~~~klKe~D~l~~~~~~~t~d~LllfTs~Grv~~l~v~~iP~~~~~~  575 (805)
T PRK05560        496 PEEDVVVTLTHGGYIKRTPLDEYRAQRRGGKGVSGAKTKEDDFVEHLFVASTHDTLLFFTNRGRVYRLKVYEIPEASRTA  575 (805)
T ss_pred             CCCCEEEEEeCCCEEEEcchhhhhhhcccCCCccccccCCCCeeEEEEEecCCCeEEEEecCCeEEEEEhhhCcCCCcCC


Q ss_pred             --------cccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCC-------ceeeeeeecccceeeEeeeCCCccc
Q psy8152         122 --------TNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNT-------TKNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       122 --------~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                              ........|..+.-.+   +...++..+..|.++--.+..       +.....++....             
T Consensus       576 ~G~~i~~ll~L~~~E~Iv~~i~~~~~~~e~~lvlvTk~GyiKRi~l~~~~~~~r~G~~~ikLke~D~-------------  642 (805)
T PRK05560        576 RGRPIVNLLPLEPGEKITAILPVREFDDDKYLFFATKNGTVKKTSLSEFSNIRSNGIIAINLDEGDE-------------  642 (805)
T ss_pred             CCeEHHHhcCCCCCceEEEEEeccCCCCCCEEEEEeCCCEEEEEEhHHhhhcccCCceeeccCCCCE-------------


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEE
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMM  257 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  257 (444)
                            +..+........++..+..|.+..+....      ...+.....+.....-+..+.+.++..+++..+..|.++
T Consensus       643 ------lv~v~~~~~~d~lll~T~~Gr~~r~~~~eIp~~gr~~~Gv~~i~L~~~E~Vv~~~~v~~~~~~il~vTk~G~iK  716 (805)
T PRK05560        643 ------LIGVRLTDGDDDILLATKNGKAIRFPESDVRPMGRTARGVRGIKLREGDEVVSMDVVREDSQEILTVTENGYGK  716 (805)
T ss_pred             ------EEEEEEeCCCCEEEEEECCCcEEEEEhhhcCccCcccCCcccccCCCCCEEEEEEEEcCCCcEEEEEEeCCeEE


Q ss_pred             EEEcCC--------CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         258 AVDLRG--------KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       258 iwd~~~--------~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ...+..        .+.....+......+..+........++..+.+|.+..+...
T Consensus       717 r~~l~e~~~~~R~~kG~~~lkl~~~~d~lv~v~~v~~~~~v~i~T~~G~~lrf~~~  772 (805)
T PRK05560        717 RTPVSEYRLQGRGGKGVITIKITEKNGKLVGALPVDDDDEIMLITDSGKLIRTRVS  772 (805)
T ss_pred             EEEHHHhhccCCCCCcEEeeeccCCCCeEEEEEEecCCCeEEEEecCCeEEEEEHH

>TIGR01063 gyrA DNA gyrase, A subunit

Probab=87.77  E-value=37  Score=35.22  Aligned_cols=266  Identities=12%  Similarity=0.065  Sum_probs=0.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc--CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI--TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN-   80 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-   80 (444)
                      .+...+++-+.+|.|+-..+..-......-.-+...  .-...+..+... .....|+..+..|.+.......-..... 
T Consensus       494 ~~e~~~vllS~~GyIKri~~~~~~~~~~~~~g~s~~klKe~D~l~~~~~~-~t~d~LllfTs~Grv~~l~~~~IP~~~r~  572 (800)
T TIGR01063       494 ARENVVVTLSHNGYVKRVPVSAYRLQKRGGKGVSGADMKDDDFIEQLLVA-STHDYLLFFTNRGKVYWLKVYQIPEASRT  572 (800)
T ss_pred             CcceEEEEEcCCCEEEecchhhhhhhcccCcCccccccCCCCeeEEEEEe-cCCCeEEEEeCCCcEEEEEhhhCcCCCcC


Q ss_pred             ---------eeeccccccEEEEE----eCCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCCE
Q psy8152          81 ---------TDVSFGEGDIVGVS----RYDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSNI  141 (444)
Q Consensus        81 ---------~~~~~~~~~v~~~s----~~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~  141 (444)
                               +.+.....-+.+++    .+..+++..+..|.++-..+..-....      ..+.-...+..+........
T Consensus       573 ~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~~~~lvliT~~GyiKRi~l~~~~~~~r~G~~aiklke~D~lv~v~~~~~~d~  652 (800)
T TIGR01063       573 AKGKPIVNLLPLQPDERITAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSNIRSNGIIAIKLDDGDELISVRLTSGDDE  652 (800)
T ss_pred             CCCcCHHHhccCCCCCeEEEEEEeccCCCCCEEEEEeCCCEEEEEEhHHhhhhccCCcccccCCCCCEEEEEEEeCCCCE


Q ss_pred             EEEeeCCCeEEEEEcCC---------ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEE
Q psy8152         142 IATGGKENDLKLWDLNT---------TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVR  212 (444)
Q Consensus       142 l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  212 (444)
                      ++..+..|.+..+....         |.....+.....                   |.++...++...++..+..|.++
T Consensus       653 lll~Ts~Gr~~r~~v~eIp~~gr~~~Gv~~i~L~~~E~-------------------Vv~~~~v~~~~~ll~vT~~G~~K  713 (800)
T TIGR01063       653 VMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKLKNEDF-------------------VVSLLVVSEESYLLIVTENGYGK  713 (800)
T ss_pred             EEEEECCCcEEEEEhhhcCCcCCCCCCeecccCCCCCE-------------------EEEEEEeccccEEEEEecCCcEE


Q ss_pred             EEEcC------CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         213 VYDPK------ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       213 i~d~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      ...+.      ....+.....+......+..+........++..+.+|.+..+....    +.....-...|..+.+..+
T Consensus       714 r~~l~e~~~~~R~~kGv~~ikl~~~~d~lv~~~~v~~~~~v~liT~~G~~lrf~~~e----I~~~gR~a~GVk~i~L~~~  789 (800)
T TIGR01063       714 RTSIEEYRETSRGGKGVKSIKITDRNGQVVGAIAVDDDDELMLITSAGKLIRTSVQD----VSEQGRNTQGVRLIRLDED  789 (800)
T ss_pred             EEEHHHccccCCCCcceEEEEccCCCCeEEEEEEecCCCeEEEEecCCeEEEeeHhh----CCccccCCCCeeeeeeCCC


Q ss_pred             CCEEEEE
Q psy8152         287 ENLILSV  293 (444)
Q Consensus       287 ~~~l~s~  293 (444)
                      ...+...
T Consensus       790 D~vv~~~  796 (800)
T TIGR01063       790 DKLVSVS  796 (800)
T ss_pred             CEEEEEE

This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	444
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.98
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.98
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.97
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.96
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.96
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.95
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.95
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.95
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.95
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.95
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.94
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.94
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.94
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.94
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.93
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.93
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.93
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.93
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.92
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.92
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.91
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.91
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.9
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.9
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.9
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.9
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.89
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.89
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.89
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.88
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.88
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.87
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.86
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.85
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.85
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.83
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.83
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.83
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.83
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.83
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.82
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.8
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.79
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.79
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.78
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.78
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.78
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.77
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.77
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.77
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.77
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.76
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.76
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.76
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.76
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.75
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.75
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.74
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.74
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.73
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.72
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.72
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.72
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.71
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.69
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.69
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.67
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.67
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.66
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.65
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.65
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.65
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.65
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.63
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.63
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.59
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.59
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.58
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.57
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.57
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.56
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.55
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.55
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.54
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.53
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.52
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.52
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.5
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.5
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.5
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.5
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.49
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.48
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.41
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.41
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.4
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.39
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.38
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.37
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.36
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.35
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.35
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.35
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.35
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.34
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.3
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.3
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.27
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.26
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.24
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.23
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.21
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.2
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.18
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.15
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.14
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.11
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.09
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.06
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.05
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.02
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.02
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.01
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.01
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.92
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.91
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.88
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.85
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.85
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.83
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.83
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.82
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.82
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.82
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.8
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.79
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.76
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.75
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.75
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.71
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.68
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.65
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.64
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.62
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.6
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.58
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.54
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.53
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.49
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.48
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.47
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.47
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.45
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.45
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.45
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.44
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.41
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.38
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.38
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.32
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.32
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.3
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	98.29
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.28
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.23
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.22
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.2
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.18
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.16
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.14
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	98.13
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.13
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.11
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.07
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.06
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	98.05
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.03
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	98.01
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.01
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.97
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.9
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.89
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.89
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.83
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.81
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.8
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.76
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.73
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.71
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.7
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.69
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.66
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.65
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.59
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.53
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.42
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.4
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.36
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.32
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.31
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.19
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.13
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.06
3ott_A	758	Two-component system sensor histidine kinase; beta	97.04
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.95
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.9
3ott_A	758	Two-component system sensor histidine kinase; beta	96.88
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.87
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.77
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.73
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	96.67
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.51
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.47
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.35
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.34
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.29
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.02
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	95.42
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	94.72
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	94.13
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	93.6
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	93.23
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	93.17
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	90.12
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	89.28
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	88.35
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	88.34
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	88.05
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	87.24
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	85.63
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	85.47
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	84.68
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	84.26
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	82.3

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.4e-48  Score=353.87  Aligned_cols=284  Identities=13%  Similarity=0.216  Sum_probs=259.3

Q ss_pred             CcccceEEEeeecc---CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNV---EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~---~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      +|.+.|++++|+|.   ++.+|++|+.|++|+||++..++........+|...|.++  ++++.++++++.|++|++||+
T Consensus        30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~  109 (321)
T 3ow8_A           30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL  109 (321)
T ss_dssp             SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred             cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            89999999999941   4679999999999999999877665555566888888776  578899999999999999999


Q ss_pred             CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      .+++++..+..|...+.+++|+|++++|++|+.++.|++|++.+++....+..+..                  .|.+++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~------------------~v~~~~  171 (321)
T 3ow8_A          110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK------------------FILSIA  171 (321)
T ss_dssp             TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS------------------CEEEEE
T ss_pred             CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc------------------eEEEEE
Confidence            99998877778889999999999999999999999999999999988888877766                  799999


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      |+|++++|++++.|+.|++||++   ..+.+..+.+|..+|.+++|+|++++|++|+.|+.|++||++. ++++..+.+|
T Consensus       172 ~spdg~~lasg~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h  247 (321)
T 3ow8_A          172 YSPDGKYLASGAIDGIINIFDIA---TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSGH  247 (321)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECCC
T ss_pred             ECCCCCEEEEEcCCCeEEEEECC---CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcCC
Confidence            99999999999999999999999   7888899999999999999999999999999999999999999 9999999999


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      ...|++++|+|++++|++++.|++|++||+.+++++..+. |...|.+++|+++         +.++++++.|+.|++|+
T Consensus       248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~---------g~~l~s~~~d~~i~vwd  318 (321)
T 3ow8_A          248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN---------GSKIVSVGDDQEIHIYD  318 (321)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT---------SSEEEEEETTCCEEEEE
T ss_pred             CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC---------CCEEEEEeCCCeEEEEe
Confidence            9999999999999999999999999999999999988875 8899999999854         57899999999999998


Q ss_pred             C
Q psy8152         354 P  354 (444)
Q Consensus       354 ~  354 (444)
                      .
T Consensus       319 ~  319 (321)
T 3ow8_A          319 C  319 (321)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.6e-48  Score=365.89  Aligned_cols=281  Identities=15%  Similarity=0.235  Sum_probs=261.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|..+|++++|+ |++.+|++|+.||+|+|||+.+++....+.  +|...|.++  +|++++|++|+.|++|++||+.++
T Consensus       106 gh~~~V~~~~~~-p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~--~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~  182 (410)
T 1vyh_C          106 GHRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF  182 (410)
T ss_dssp             CCSSCEEEEEEC-SSSSEEEEEESSSCEEEEETTTCCCCEEEC--CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred             ccCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEEe--ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence            899999999999 799999999999999999999999888775  677777665  678999999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +++..+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|..                  +|.+++|+|
T Consensus       183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~------------------~v~~~~~~~  244 (410)
T 1vyh_C          183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE------------------WVRMVRPNQ  244 (410)
T ss_dssp             CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS------------------CEEEEEECT
T ss_pred             ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc------------------cEEEEEECC
Confidence            98888889999999999999999999999999999999999999999888877                  899999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC--------------------CCEEEEEcCCCcEE
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ--------------------SHYVIVGSTTGDMM  257 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~  257 (444)
                      ++.+|++|+.|++|++||++   ...+...+..|...|.+++|+|+                    +.+|++|+.|+.|+
T Consensus       245 ~g~~l~s~s~D~~v~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~  321 (410)
T 1vyh_C          245 DGTLIASCSNDQTVRVWVVA---TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK  321 (410)
T ss_dssp             TSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred             CCCEEEEEcCCCeEEEEECC---CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence            99999999999999999999   77788889999999999999996                    67899999999999


Q ss_pred             EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchh
Q psy8152         258 AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKK  336 (444)
Q Consensus       258 iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~  336 (444)
                      +||+++ +.++..+.+|...|++++|+|++++|++++.||.|++||+.+++++..+. |...|++++|+++         
T Consensus       322 iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~---------  391 (410)
T 1vyh_C          322 MWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT---------  391 (410)
T ss_dssp             EEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS---------
T ss_pred             EEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCC---------
Confidence            999999 99999999999999999999999999999999999999999999888876 8889999999855         


Q ss_pred             hhhccccccCCCccccCC
Q psy8152         337 EEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       337 ~~~~~s~~~d~~i~~W~~  354 (444)
                      +.++++++.|++|++|+.
T Consensus       392 ~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          392 APYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             SSCEEEEETTSEEEEEC-
T ss_pred             CCEEEEEeCCCcEEEEeC
Confidence            568999999999999985

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=6.4e-47  Score=342.96  Aligned_cols=274  Identities=12%  Similarity=0.161  Sum_probs=247.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++.+|++|+.|++|++|++..++.  .....+.  +|...|.+++|+ +++.++++++.|++|++||+.+++.+..+..+
T Consensus        47 ~~~~l~tgs~D~~v~vW~~~~~~~--~~~~~l~--gh~~~v~~~~~~-~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~  121 (321)
T 3ow8_A           47 NSETVVTGSLDDLVKVWKWRDERL--DLQWSLE--GHQLGVVSVDIS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAG  121 (321)
T ss_dssp             --CEEEEEETTSCEEEEEEETTEE--EEEEEEC--CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             CCCEEEEEcCCCCEEEEECCCCCe--eeeeeec--cCCCCEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCC
Confidence            456899999999999999987652  1111222  899999999999 79999999999999999999999988877644


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .......+++|++++|++++.++.|++|++.+++....+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..
T Consensus       122 ~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~  201 (321)
T 3ow8_A          122 PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT  201 (321)
T ss_dssp             TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence            33444577789999999999999999999999988877778899999999999999999999999999999999999998


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      +..|..                  +|++++|+|++++|++++.|++|++||++   ....+..+.+|...|.+++|+|++
T Consensus       202 ~~~h~~------------------~v~~l~~spd~~~l~s~s~dg~i~iwd~~---~~~~~~~~~~h~~~v~~~~~sp~~  260 (321)
T 3ow8_A          202 LEGHAM------------------PIRSLTFSPDSQLLVTASDDGYIKIYDVQ---HANLAGTLSGHASWVLNVAFCPDD  260 (321)
T ss_dssp             ECCCSS------------------CCCEEEECTTSCEEEEECTTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTS
T ss_pred             EcccCC------------------ceeEEEEcCCCCEEEEEcCCCeEEEEECC---CcceeEEEcCCCCceEEEEECCCC
Confidence            888777                  79999999999999999999999999999   777888899999999999999999


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ++|++++.|+.|+|||+.+ ++++.++.+|...|++++|+|++++|++++.||.|+|||+.
T Consensus       261 ~~l~s~s~D~~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          261 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             SEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CEEEEEeCCCcEEEEeCCC-CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999999999999 99999999999999999999999999999999999999974

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=6.9e-47  Score=372.91  Aligned_cols=330  Identities=11%  Similarity=0.108  Sum_probs=262.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee--
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV--   83 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~--   83 (444)
                      ...|++|+.|+.|++|+..+.+.    ...+.  +|...|++++|+ |++.+|++|+.|++|++|++.+++....+..  
T Consensus       160 ~~~l~s~s~D~~v~lwd~~~~~~----~~~l~--~H~~~V~~v~fs-pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~  232 (611)
T 1nr0_A          160 PFRIISGSDDNTVAIFEGPPFKF----KSTFG--EHTKFVHSVRYN-PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS  232 (611)
T ss_dssp             SCEEEEEETTSCEEEEETTTBEE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEECBCTT
T ss_pred             CeEEEEEeCCCeEEEEECCCCeE----eeeec--cccCceEEEEEC-CCCCEEEEEECCCcEEEEECCCCcEeeeecccc
Confidence            34699999999999999876653    22233  899999999999 7999999999999999999998887766531  


Q ss_pred             ---ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc-------------------------------------
Q psy8152          84 ---SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW-------------------------------------  121 (444)
Q Consensus        84 ---~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~-------------------------------------  121 (444)
                         .+|...|.++  +|++++|++++.|++|++||+.+++++.                                     
T Consensus       233 ~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~  312 (611)
T 1nr0_A          233 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE  312 (611)
T ss_dssp             SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCC
Confidence               1577777665  6899999999999999999998765432                                     


Q ss_pred             ------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee-ecccceeeEeee-----------------
Q psy8152         122 ------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA-KNVSHRVLVYSV-----------------  177 (444)
Q Consensus       122 ------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~-----------------  177 (444)
                            .+.+|...|++++|+|++++|++++.|+.|++||+.+++....+ ..|...+..+.+                 
T Consensus       313 ~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~  392 (611)
T 1nr0_A          313 LGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV  392 (611)
T ss_dssp             TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred             CCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEE
Confidence                  23468899999999999999999999999999999987665443 223333333332                 


Q ss_pred             ---------------------------CCCcc-------------------cccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152         178 ---------------------------KPDEF-------------------DLRRPVWVNGISFLPNSDKVAVCSKQGYV  211 (444)
Q Consensus       178 ---------------------------~~~~~-------------------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  211 (444)
                                                 +|++.                   ...+...+.+++|+|++++|++|+.|++|
T Consensus       393 w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v  472 (611)
T 1nr0_A          393 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV  472 (611)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred             eecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeE
Confidence                                       23320                   00123457899999999999999999999


Q ss_pred             EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE--eccccCceeEEEecCCCCE
Q psy8152         212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK--YKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~h~~~i~~~~~s~~~~~  289 (444)
                      ++||+. ......+.. ..|...|++++|+|++++|++++.|++|++|++.+.++++..  +.+|...|++++|+|++++
T Consensus       473 ~lwd~~-~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~  550 (611)
T 1nr0_A          473 HVYKLS-GASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR  550 (611)
T ss_dssp             EEEEEE-TTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSE
T ss_pred             EEEEcc-CCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCE
Confidence            999998 222222333 678999999999999999999999999999999862344443  3459999999999999999


Q ss_pred             EEEEECCCcEEEEEcCCCc-eE-EEe-ec-CCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         290 ILSVSLDRHFRVHDFHSKK-LL-RKD-YM-QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~~-~~-~~~-~~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      |++++.|++|++|++.++. .+ ..+ .| ...|.+++|+++         +. +++++.|++|++|++
T Consensus       551 lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d---------~~-l~s~~~D~~i~lW~~  609 (611)
T 1nr0_A          551 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE---------TT-IVSAGQDSNIKFWNV  609 (611)
T ss_dssp             EEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET---------TE-EEEEETTSCEEEEEC
T ss_pred             EEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCC---------CE-EEEecCCCCEEEEec
Confidence            9999999999999998865 33 333 36 788999999854         45 999999999999986

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2.6e-46  Score=342.23  Aligned_cols=279  Identities=14%  Similarity=0.150  Sum_probs=250.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...|++++|+ |++.+|++|+.||+|+||++.+++.+..+.  .|...|.  +++|++++|++++.|+.|++|++.+.
T Consensus        53 gH~~~v~~~~~s-~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~  129 (340)
T 1got_B           53 GHLAKIYAMHWG-TDSRLLLSASQDGKLIIWDSYTTNKVHAIP--LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR  129 (340)
T ss_dssp             CCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred             CCCCceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCcceEee--cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence            899999999999 799999999999999999999998887776  4555554  45789999999999999999999876


Q ss_pred             C----ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         118 P----DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       118 ~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      .    ....+.+|...|.++.|++++ .+++++.|+.|++||+.+++++..+.+|..                  .|+++
T Consensus       130 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~------------------~v~~~  190 (340)
T 1got_B          130 EGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTG------------------DVMSL  190 (340)
T ss_dssp             SBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSS------------------CEEEE
T ss_pred             CCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCC------------------ceEEE
Confidence            4    233466799999999999876 488999999999999999999998888877                  79999


Q ss_pred             EEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc
Q psy8152         194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  273 (444)
                      +|+|++++|++|+.|++|++||++   ...++..+.+|...|++++|+|++++|++|+.||.|++||++. ++.+..+..
T Consensus       191 ~~~~~~~~l~sg~~d~~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~  266 (340)
T 1got_B          191 SLAPDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSH  266 (340)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETT---TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC
T ss_pred             EECCCCCEEEEEeCCCcEEEEECC---CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CcEEEEEcc
Confidence            999999999999999999999999   7788888999999999999999999999999999999999998 888777752


Q ss_pred             --ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         274 --FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       274 --h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                        +...|++++|+|++++|++|+.|+.|++||+.+++.+..+. |..+|.+++|+++         +.+++|++.|+.|+
T Consensus       267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d---------g~~l~s~s~D~~i~  337 (340)
T 1got_B          267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD---------GMAVATGSWDSFLK  337 (340)
T ss_dssp             TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT---------SSCEEEEETTSCEE
T ss_pred             CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC---------CCEEEEEcCCccEE
Confidence              34579999999999999999999999999999998888775 8899999998854         67899999999999


Q ss_pred             ccC
Q psy8152         351 KYD  353 (444)
Q Consensus       351 ~W~  353 (444)
                      ||+
T Consensus       338 iWd  340 (340)
T 1got_B          338 IWN  340 (340)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.8e-46  Score=336.53  Aligned_cols=283  Identities=12%  Similarity=0.121  Sum_probs=246.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...|++++|+ |++.+|++|+.||.|++||+.++..+..+.  .|..+|.  .++|++++|++|+.|++|++||+.++
T Consensus        11 ~h~~~V~~~~fs-p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~   87 (304)
T 2ynn_A           11 NRSDRVKGIDFH-PTEPWVLTTLYSGRVELWNYETQVEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG   87 (304)
T ss_dssp             EECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred             CCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCceeEEee--ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence            899999999999 799999999999999999999998888776  4555555  45789999999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      +++..+.+|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|..                  .|++++|+
T Consensus        88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~------------------~v~~v~~~  149 (304)
T 2ynn_A           88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH------------------FVMCVAFN  149 (304)
T ss_dssp             CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS------------------CEEEEEEC
T ss_pred             cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC------------------cEEEEEEC
Confidence            998888899999999999999999999999999999999886 45566677766                  79999999


Q ss_pred             c-CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEcc--CCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         197 P-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTN--QSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       197 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      | ++.+|++|+.|++|++||++   ...+...+. .+...+..+.|+|  ++.+|++|+.|+.|++||+++ ++++.++.
T Consensus       150 p~~~~~l~sgs~D~~v~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~~~~~~~~  225 (304)
T 2ynn_A          150 PKDPSTFASGCLDRTVKVWSLG---QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLE  225 (304)
T ss_dssp             TTCTTEEEEEETTSEEEEEETT---CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-TEEEEEEE
T ss_pred             CCCCCEEEEEeCCCeEEEEECC---CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-CccceeeC
Confidence            9 56899999999999999998   555555544 5567899999987  678999999999999999999 99999999


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccc
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEK  351 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~  351 (444)
                      +|...|++++|+|++++|++++.||+|++||+.+++++..+. +...+.++++.+.-       ...++++++. +.+.+
T Consensus       226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~asg~~-~g~~~  297 (304)
T 2ynn_A          226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG-------RKNYIASGFD-NGFTV  297 (304)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC-------GGGCEEEEET-TEEEE
T ss_pred             CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC-------CceEEEEecC-CceEE
Confidence            999999999999999999999999999999999999998886 67889999988652       2234666654 45666


Q ss_pred             cCCC
Q psy8152         352 YDPE  355 (444)
Q Consensus       352 W~~~  355 (444)
                      |++.
T Consensus       298 ~~~~  301 (304)
T 2ynn_A          298 LSLG  301 (304)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            7654

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=3.3e-46  Score=350.25  Aligned_cols=271  Identities=13%  Similarity=0.156  Sum_probs=245.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.||.|++|++.+++..    ..+.  +|...|++++|+ |++.+|++|+.|++|+|||+.+++++..+. 
T Consensus       118 p~~~~l~s~s~Dg~i~vwd~~~~~~~----~~l~--~h~~~V~~v~~~-~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~-  189 (410)
T 1vyh_C          118 PVFSVMVSASEDATIKVWDYETGDFE----RTLK--GHTDSVQDISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMH-  189 (410)
T ss_dssp             SSSSEEEEEESSSCEEEEETTTCCCC----EEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCCCEEETTSSCEEECCC-
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcEE----EEEe--ccCCcEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeEEEc-
Confidence            34678999999999999999988751    2333  899999999999 799999999999999999999988888775 


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       +|...|.++  +|++++|++|+.|++|++||+.++.++..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++++
T Consensus       190 -~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~  268 (410)
T 1vyh_C          190 -GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC  268 (410)
T ss_dssp             -CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred             -CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence             566666654  68899999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecC--------------------CCEEEEEeCCceEEEEEcCCCCC
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--------------------SDKVAVCSKQGYVRVYDPKITTQ  221 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~d~~i~i~d~~~~~~  221 (444)
                      ...+..|..                  .|.+++|+|+                    +.+|++|+.|++|++||++   .
T Consensus       269 ~~~~~~h~~------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~---~  327 (410)
T 1vyh_C          269 KAELREHRH------------------VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS---T  327 (410)
T ss_dssp             EEEECCCSS------------------CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT---T
T ss_pred             eeEecCCCc------------------eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC---C
Confidence            988888887                  5777777764                    6799999999999999999   7


Q ss_pred             ccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         222 RRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       222 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                      ..++..+.+|...|++++|+|++++|++|+.||.|++||+.+ ++++.++.+|...|++++|+|++++|++|+.||+|+|
T Consensus       328 ~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~v  406 (410)
T 1vyh_C          328 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV  406 (410)
T ss_dssp             TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred             CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence            888999999999999999999999999999999999999999 9999999999999999999999999999999999999


Q ss_pred             EEcC
Q psy8152         302 HDFH  305 (444)
Q Consensus       302 w~~~  305 (444)
                      |+++
T Consensus       407 W~~r  410 (410)
T 1vyh_C          407 WECR  410 (410)
T ss_dssp             EC--
T ss_pred             EeCC
Confidence            9863

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=5.4e-46  Score=342.04  Aligned_cols=307  Identities=16%  Similarity=0.187  Sum_probs=237.5

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc------CCeEEEEeCCCCccccce
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS------GQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~------d~~i~vw~~~~~~~~~~~   81 (444)
                      .++.++.+.....|++.....          ..|...|++++|+ |++.+|++|+.      |+.|++|+..++.....+
T Consensus        18 ~~~~~~g~~~~~~w~~p~~~p----------~~H~~~V~~v~fS-pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~   86 (357)
T 4g56_B           18 LYFQSNGSSKGSAWGRPVTAP----------ACMEVQIGAVRYR-RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL   86 (357)
T ss_dssp             --------------------------------CCCSEEEEEEEC-SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG
T ss_pred             eEEecCCCccccccCCCCCCc----------ccccCCEEEEEEC-CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE
Confidence            344445555667776543221          1699999999999 79999999997      788999998877654333


Q ss_pred             --eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152          82 --DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKL  153 (444)
Q Consensus        82 --~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  153 (444)
                        ....|...|.++  +|++ .+++++.+|+|+|||+.+++...    ...+|...|++++|+|++++|++|+.|+.|++
T Consensus        87 ~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i  165 (357)
T 4g56_B           87 CTAGVQTEAGVTDVAWVSEK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV  165 (357)
T ss_dssp             CSEEEECSSCEEEEEEETTT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred             ecccCCCCCCEEEEEEcCCC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence              223566777665  5665 45668899999999998876543    23468999999999999999999999999999


Q ss_pred             EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEE--EeC
Q psy8152         154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLK--VDI  230 (444)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~  230 (444)
                      ||+++++++..+..|..                  .|++++|+|++ .+|++++.|++|++||++   ..+++..  +..
T Consensus       166 wd~~~~~~~~~~~~h~~------------------~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~---~~~~~~~~~~~~  224 (357)
T 4g56_B          166 WDLSQKAVLKSYNAHSS------------------EVNCVAACPGKDTIFLSCGEDGRILLWDTR---KPKPATRIDFCA  224 (357)
T ss_dssp             EETTTTEEEEEECCCSS------------------CEEEEEECTTCSSCEEEEETTSCEEECCTT---SSSCBCBCCCTT
T ss_pred             EECCCCcEEEEEcCCCC------------------CEEEEEEccCCCceeeeeccCCceEEEECC---CCceeeeeeecc
Confidence            99999999999988877                  79999999988 588999999999999999   4444443  445


Q ss_pred             CCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCc
Q psy8152         231 PDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       231 ~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      +...+.+++|+|+ +.+|++|+.|+.|++||+++ ++++..+.+|...|++++|+|++ ++|++++.|++|+|||+.+++
T Consensus       225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~  303 (357)
T 4g56_B          225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE  303 (357)
T ss_dssp             CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred             ccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence            6778999999997 57899999999999999999 99999999999999999999987 689999999999999999999


Q ss_pred             eEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         309 LLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      ++..+.|...|++++|+|.        ++.+++|++.|++|++|++..
T Consensus       304 ~~~~~~H~~~V~~vafsP~--------d~~~l~s~s~Dg~v~iW~~~~  343 (357)
T 4g56_B          304 VFRDLSHRDFVTGVAWSPL--------DHSKFTTVGWDHKVLHHHLPS  343 (357)
T ss_dssp             EEEECCCSSCEEEEEECSS--------STTEEEEEETTSCEEEEECC-
T ss_pred             EeEECCCCCCEEEEEEeCC--------CCCEEEEEcCCCeEEEEECCC
Confidence            9988889999999999852        246899999999999999864

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.9e-45  Score=336.04  Aligned_cols=282  Identities=12%  Similarity=0.116  Sum_probs=251.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC-
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP-  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~-  118 (444)
                      +|...|++++|+ |++.+|++|+.|++|+|||..+++....+..+.......+++|++.+|++++.|+.+++|++.... 
T Consensus        62 gH~~~V~~~~~s-~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~  140 (354)
T 2pbi_B           62 GHGNKVLCMDWC-KDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN  140 (354)
T ss_dssp             CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred             CCCCeEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence            899999999999 799999999999999999999888887776544444556678999999999999999999986542 


Q ss_pred             -----ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         119 -----DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       119 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                           ....+..|...|.+++|+|++..|++++.|++|++||+.+++++..+.+|..                  .|.++
T Consensus       141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~------------------~v~~~  202 (354)
T 2pbi_B          141 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA------------------DVLCL  202 (354)
T ss_dssp             CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS------------------CEEEE
T ss_pred             ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC------------------CeEEE
Confidence                 2224557999999999999999999999999999999999999999988877                  79999


Q ss_pred             EEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         194 SFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       194 ~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      +|+|  ++++|++|+.|++|++||++   ...++..+..|...|++++|+|++.+|++|+.|++|++||++. .+.+..+
T Consensus       203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~-~~~~~~~  278 (354)
T 2pbi_B          203 DLAPSETGNTFVSGGCDKKAMVWDMR---SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA-DREVAIY  278 (354)
T ss_dssp             EECCCSSCCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEE
T ss_pred             EEEeCCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEE
Confidence            9987  46899999999999999999   7788888999999999999999999999999999999999998 8777776


Q ss_pred             ccc--cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCC
Q psy8152         272 KGF--AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDS  348 (444)
Q Consensus       272 ~~h--~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~  348 (444)
                      ..+  ...+++++|+|++++|++++.|+.|++||+.+++.+..+. |...|.+++|+++         +.++++++.|++
T Consensus       279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd---------g~~l~sgs~D~~  349 (354)
T 2pbi_B          279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD---------GTAFCSGSWDHT  349 (354)
T ss_dssp             CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT---------SSCEEEEETTSE
T ss_pred             cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC---------CCEEEEEcCCCC
Confidence            643  4578999999999999999999999999999998887765 8999999999854         679999999999


Q ss_pred             ccccC
Q psy8152         349 DEKYD  353 (444)
Q Consensus       349 i~~W~  353 (444)
                      |++|+
T Consensus       350 v~vW~  354 (354)
T 2pbi_B          350 LRVWA  354 (354)
T ss_dssp             EEEEC
T ss_pred             EEecC
Confidence            99995

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2e-45  Score=335.71  Aligned_cols=286  Identities=15%  Similarity=0.156  Sum_probs=235.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-------cc--ccceeeccccccEEEE--EeCCCeEEEEecCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-------NF--NTNTDVSFGEGDIVGV--SRYDECILTAVKSGD  108 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-------~~--~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~  108 (444)
                      .|...|.+++|+ |++.+|++++ |+++++|+....       ..  ........+...|.++  +++ +.|++|+.||+
T Consensus        28 ~~~~~v~~~~fs-~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~  104 (344)
T 4gqb_B           28 CMERQLEAARYR-SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGA  104 (344)
T ss_dssp             SCCSEEEEEEEC-TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSE
T ss_pred             cccCCEEEEEEC-CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCE
Confidence            567889999999 7999998887 678888863211       00  0111112345567665  555 57889999999


Q ss_pred             EEEEEcCCCCcccc----ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152         109 VKLWRYKTEPDQWT----NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       109 i~iw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      |+|||+.+++....    ..+|...|++++|+|++++|++|+.|++|++||+.+++++..+.+|..              
T Consensus       105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~--------------  170 (344)
T 4gqb_B          105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA--------------  170 (344)
T ss_dssp             EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------------
T ss_pred             EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC--------------
Confidence            99999999876542    347999999999999999999999999999999999999999998887              


Q ss_pred             cCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccC-CCEEEEEcCCCcEEEEE
Q psy8152         185 RRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQ-SHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd  260 (444)
                          .|++++|+|++ .+|++++.|++|++||++   ..+++..+.  .+...+.+++|+|+ +++|++|+.||.|+|||
T Consensus       171 ----~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd  243 (344)
T 4gqb_B          171 ----QVTCVAASPHKDSVFLSCSEDNRILLWDTR---CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD  243 (344)
T ss_dssp             ----CEEEEEECSSCTTEEEEEETTSCEEEEETT---SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred             ----ceEEEEecCCCCCceeeecccccccccccc---ccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence                89999999998 688999999999999999   666666553  45567899999995 67889999999999999


Q ss_pred             cCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhh
Q psy8152         261 LRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQ  339 (444)
Q Consensus       261 ~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  339 (444)
                      +++ ++++.++.+|...|++++|+|++ ++|++|+.|++|+|||+.+++++....|...|++++|+++-.        .+
T Consensus       244 ~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~--------~l  314 (344)
T 4gqb_B          244 TKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNH--------SL  314 (344)
T ss_dssp             SCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSST--------TE
T ss_pred             CCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCC--------eE
Confidence            999 99999999999999999999998 589999999999999999999877667999999999986521        45


Q ss_pred             ccccccCCCccccCCCccc
Q psy8152         340 EHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       340 ~~s~~~d~~i~~W~~~~~~  358 (444)
                      ++|++.|++|++|++....
T Consensus       315 las~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          315 LTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             EEEEETTSCEEEEECCC--
T ss_pred             EEEEcCCCeEEEEECCCCC
Confidence            7799999999999987543

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=5.5e-45  Score=359.36  Aligned_cols=313  Identities=11%  Similarity=0.061  Sum_probs=265.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ++++.|++++ ++.|++|++.+++.    ...+.  +|...|++++|+ |++++||+|+.|++|+|||+.+++.......
T Consensus        28 pdg~~l~~~~-~~~v~l~~~~~~~~----~~~~~--~h~~~v~~~~~s-pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~   99 (611)
T 1nr0_A           28 PAGDKIQYCN-GTSVYTVPVGSLTD----TEIYT--EHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTTQTTHILKTTI   99 (611)
T ss_dssp             TTSSEEEEEE-TTEEEEEETTCSSC----CEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred             CCCCEEEeCC-CCEEEEecCCCccc----CeEec--CCCCceEEEEEC-CCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence            4567888877 56999999986653    12233  899999999999 7999999999999999999976655444444


Q ss_pred             ccccccEEEE--EeCCCeEEEEecC----CcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEc
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKS----GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDL  156 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~  156 (444)
                      .+|..+|.++  +|++++|++++.+    +.|++|+  .++....+.+|...|++++|+|++. .|++|+.|++|++||.
T Consensus       100 ~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~  177 (611)
T 1nr0_A          100 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG  177 (611)
T ss_dssp             ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred             cccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence            5777777665  7889999988865    3677777  4556666888999999999999876 6999999999999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-------
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-------  229 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------  229 (444)
                      .+++++..+.+|..                  .|++++|+|++++|++++.|++|++||+.   ....+..+.       
T Consensus       178 ~~~~~~~~l~~H~~------------------~V~~v~fspdg~~las~s~D~~i~lwd~~---~g~~~~~~~~~~~~~~  236 (611)
T 1nr0_A          178 PPFKFKSTFGEHTK------------------FVHSVRYNPDGSLFASTGGDGTIVLYNGV---DGTKTGVFEDDSLKNV  236 (611)
T ss_dssp             TTBEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TCCEEEECBCTTSSSC
T ss_pred             CCCeEeeeeccccC------------------ceEEEEECCCCCEEEEEECCCcEEEEECC---CCcEeeeecccccccc
Confidence            99998888888887                  89999999999999999999999999998   666666663       


Q ss_pred             CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee----------------------------------------
Q psy8152         230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY----------------------------------------  269 (444)
Q Consensus       230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----------------------------------------  269 (444)
                      +|...|.+++|+|++++|++++.|++|++||+.+ ++++.                                        
T Consensus       237 ~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~  315 (611)
T 1nr0_A          237 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS  315 (611)
T ss_dssp             SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE
T ss_pred             ccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC
Confidence            7999999999999999999999999999999987 65443                                        


Q ss_pred             ---EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccc
Q psy8152         270 ---KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEE  344 (444)
Q Consensus       270 ---~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~  344 (444)
                         .+.+|...|++++|+|++++|++++.|++|++||+.++++...+  .|...|.+++|+++          ..+++++
T Consensus       316 ~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~----------~~l~s~s  385 (611)
T 1nr0_A          316 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK----------GDLFTVS  385 (611)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT----------SCEEEEE
T ss_pred             cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC----------CcEEEEE
Confidence               34578999999999999999999999999999999999887664  37888999998854          4688999


Q ss_pred             cCCCccccCCCccc
Q psy8152         345 KGDSDEKYDPEHFE  358 (444)
Q Consensus       345 ~d~~i~~W~~~~~~  358 (444)
                      .|+.+++|+.....
T Consensus       386 ~d~~v~~w~~~~~~  399 (611)
T 1nr0_A          386 WDDHLKVVPAGGSG  399 (611)
T ss_dssp             TTTEEEEECSSSSS
T ss_pred             cCCceEEeecCCcc
Confidence            99999999987543

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1e-45  Score=343.51  Aligned_cols=292  Identities=12%  Similarity=0.104  Sum_probs=248.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC-
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP-  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~-  118 (444)
                      +|.+.|++++|+ |++++|++|+.|++|+|||+.+++....+..+.......+++|++++|++|+.|+.|++|++.+.. 
T Consensus        64 gH~~~V~~~~~s-p~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~  142 (380)
T 3iz6_a           64 GHSGKVYSLDWT-PEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD  142 (380)
T ss_dssp             CCSSCEEEEEEC-TTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred             ccccEEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence            899999999999 799999999999999999999998888776433333335678999999999999999999987532 


Q ss_pred             ------ccccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         119 ------DQWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       119 ------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                            ....+.+|...|.++.|+|+ +..|++|+.|++|++||+.+++.+..+.....             ..+...|.
T Consensus       143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~-------------~~h~~~v~  209 (380)
T 3iz6_a          143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP-------------SGHTADVL  209 (380)
T ss_dssp             CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS-------------SSCCSCEE
T ss_pred             ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC-------------CCCccCeE
Confidence                  23356789999999999994 66799999999999999999988776621100             01223799


Q ss_pred             EEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         192 GISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       192 ~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      +++|+| ++++|++|+.|++|++||++  ....++..+.+|...|++++|+|++++|++|+.||+|++||+++ ++++..
T Consensus       210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~  286 (380)
T 3iz6_a          210 SLSINSLNANMFISGSCDTTVRLWDLR--ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQV  286 (380)
T ss_dssp             EEEECSSSCCEEEEEETTSCEEEEETT--TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEE
T ss_pred             EEEeecCCCCEEEEEECCCeEEEEECC--CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEE
Confidence            999987 77999999999999999998  34467788899999999999999999999999999999999999 888888


Q ss_pred             ecccc-------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe-----ecCCceeEEEEcCCCcccccchhhh
Q psy8152         271 YKGFA-------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD-----YMQSRLTSILVRSDFSLENETKKEE  338 (444)
Q Consensus       271 ~~~h~-------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~  338 (444)
                      +..+.       ..|++++|+|++++|++|+.||.|++||+..++.+..+     .|...|++++|+++         +.
T Consensus       287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d---------g~  357 (380)
T 3iz6_a          287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD---------GS  357 (380)
T ss_dssp             ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSS---------SS
T ss_pred             ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCC---------CC
Confidence            76543       24899999999999999999999999999998887765     37889999999854         67


Q ss_pred             hccccccCCCccccCCCcc
Q psy8152         339 QEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       339 ~~~s~~~d~~i~~W~~~~~  357 (444)
                      ++++++.|++|++|++...
T Consensus       358 ~l~sgs~D~~i~iW~~~~~  376 (380)
T 3iz6_a          358 ALCTGSWDKNLKIWAFSGH  376 (380)
T ss_dssp             EEEEECTTSCEEEEECCSS
T ss_pred             EEEEeeCCCCEEEEecCCC
Confidence            8999999999999998754

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.2e-44  Score=337.77  Aligned_cols=311  Identities=15%  Similarity=0.148  Sum_probs=256.7

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc-----------
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF-----------   85 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-----------   85 (444)
                      ...+|+....+.  ........++|...|++++|+ |++.+|++|+ ++.++||++.+++.+..+..+.           
T Consensus        41 ~~~~~~~~~~~~--~~~~~~~~~~h~~~V~~v~fs-pdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~  116 (393)
T 1erj_A           41 YYILYNPALPRE--IDVELHKSLDHTSVVCCVKFS-NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNT  116 (393)
T ss_dssp             CEEEECTTSCCC--EEEEEEEEEECSSCCCEEEEC-TTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------
T ss_pred             eEEEECCCCCcc--cCceeEEecCCCCEEEEEEEC-CCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccc
Confidence            344666544432  122223334799999999999 7999999987 6899999999988776654221           


Q ss_pred             -----ccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152          86 -----GEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        86 -----~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~  158 (444)
                           +...|  .+++|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||+++
T Consensus       117 ~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~  196 (393)
T 1erj_A          117 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT  196 (393)
T ss_dssp             ----CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             cccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence                 11124  45578999999999999999999999988877888999999999999999999999999999999999


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEE-------eC
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-------DI  230 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~  230 (444)
                      +++...+....                   .+.+++|+| ++++|++|+.|+.|++||++   ....+..+       .+
T Consensus       197 ~~~~~~~~~~~-------------------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~---~~~~~~~~~~~~~~~~~  254 (393)
T 1erj_A          197 GQCSLTLSIED-------------------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSE---TGFLVERLDSENESGTG  254 (393)
T ss_dssp             TEEEEEEECSS-------------------CEEEEEECSTTCCEEEEEETTSCEEEEETT---TCCEEEEEC------CC
T ss_pred             CeeEEEEEcCC-------------------CcEEEEEECCCCCEEEEEcCCCcEEEEECC---CCcEEEeecccccCCCC
Confidence            98877765443                   499999999 88999999999999999998   55555555       57


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC-----------CcceeEeccccCceeEEEecCCCCEEEEEECCCcE
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK-----------GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHF  299 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i  299 (444)
                      |...|.+++|+|++++|++|+.|+.|++||++..           +.+...+.+|...|.+++|+|++.+|++|+.|+.|
T Consensus       255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v  334 (393)
T 1erj_A          255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV  334 (393)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence            8889999999999999999999999999999751           23456777899999999999999999999999999


Q ss_pred             EEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         300 RVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       300 ~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      ++||+.+++++..+. |...|.+++|.+..+   ..|++.++++++.|++|+||++..
T Consensus       335 ~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~---~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          335 LFWDKKSGNPLLMLQGHRNSVISVAVANGSS---LGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEECSSCT---TCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             EEEECCCCeEEEEECCCCCCEEEEEecCCcC---cCCCCCEEEEECCCCcEEECcccc
Confidence            999999999888776 889999999987421   115678999999999999998764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.5e-44  Score=353.20  Aligned_cols=303  Identities=15%  Similarity=0.203  Sum_probs=264.7

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++..|++++.++.|++|+.....     +..+.  +|...|++++|+ |++.+|++++.|+.|++|++.... +..+. 
T Consensus       272 ~d~~~l~~~~~d~~i~~w~~~~~~-----~~~~~--~h~~~v~~~~~~-~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~-  341 (577)
T 2ymu_A          272 PDGQTIASASDDKTVKLWNRNGQL-----LQTLT--GHSSSVWGVAFS-PDGQTIASASDDKTVKLWNRNGQH-LQTLT-  341 (577)
T ss_dssp             TTSSEEEEEETTSCEEEEETTSCE-----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSCE-EEEEC-
T ss_pred             CCCCEEEEEeCCCEEEEEeCCCcE-----EEEEe--cCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCe-eEEEe-
Confidence            456789999999999999965432     23333  899999999999 799999999999999999986544 33443 


Q ss_pred             ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       +|...+.+  ++|++++|++++.++.|++|+. +++.+..+..|...|.+++|+|++++|++++.|+.|++|+. +++.
T Consensus       342 -~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~  418 (577)
T 2ymu_A          342 -GHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL  418 (577)
T ss_dssp             -CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCE
T ss_pred             -CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCE
Confidence             56666655  5789999999999999999996 45666677889999999999999999999999999999995 4677


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+..|..                  .|++++|+|++++|++++.|+.|++|++.    .+.+..+.+|...|++++|+
T Consensus       419 ~~~~~~~~~------------------~v~~~~~s~d~~~l~~~~~d~~v~~w~~~----~~~~~~~~~~~~~v~~~~~s  476 (577)
T 2ymu_A          419 LQTLTGHSS------------------SVWGVAFSPDDQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVRGVAFS  476 (577)
T ss_dssp             EEEEECCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT----SCEEEEEECCSSCEEEEEEC
T ss_pred             EEEecCCCC------------------CeEEEEECCCCCEEEEEcCCCEEEEEECC----CCEEEEEcCCCCCEEEEEEc
Confidence            777777776                  79999999999999999999999999976    56778889999999999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT  320 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~  320 (444)
                      |++++|++++.|+.|++|+. + ++++..+.+|...|++++|+|++++|++++.||.|+|||. +++++..+. |...|+
T Consensus       477 pd~~~las~~~d~~i~iw~~-~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~  553 (577)
T 2ymu_A          477 PDGQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW  553 (577)
T ss_dssp             TTSCEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEeCCCEEEEEcC-C-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEE
Confidence            99999999999999999995 5 7899999999999999999999999999999999999996 567777765 899999


Q ss_pred             EEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      +++|+++         +++++|++.|++|++||
T Consensus       554 ~~~fs~d---------g~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          554 GVAFSPD---------GQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEECTT---------SSCEEEEETTSCEEEEC
T ss_pred             EEEEcCC---------CCEEEEEeCCCEEEEeC
Confidence            9999854         67899999999999997

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=9e-45  Score=332.63  Aligned_cols=293  Identities=12%  Similarity=0.102  Sum_probs=240.9

Q ss_pred             Cccc-ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce-eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKA-SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT-DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~-~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~-~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|.. .|++++|+ |++.+|++|+.|++|+||++.++...... ...+|...|.++  +|++++|++++.|++|++|++.
T Consensus        13 ~h~~~~v~~l~~s-p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~   91 (345)
T 3fm0_A           13 AHPDSRCWFLAWN-PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN   91 (345)
T ss_dssp             CSTTSCEEEEEEC-TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred             CCCCCcEEEEEEC-CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence            7887 99999999 79999999999999999999877644322 224777778665  6889999999999999999998


Q ss_pred             CCC--ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce---eeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         116 TEP--DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       116 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      .+.  ++..+.+|...|.+++|+|++++|++|+.|+.|++||+..+.   ++..+..|..                  .|
T Consensus        92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~------------------~v  153 (345)
T 3fm0_A           92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ------------------DV  153 (345)
T ss_dssp             CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS------------------CE
T ss_pred             CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC------------------Ce
Confidence            764  445677899999999999999999999999999999998753   3455555555                  79


Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-----
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG-----  265 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----  265 (444)
                      .+++|+|++++|++++.|++|++|+++ .....+...+.+|...|.+++|+|++++|++|+.|++|+||++..++     
T Consensus       154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~  232 (345)
T 3fm0_A          154 KHVVWHPSQELLASASYDDTVKLYREE-EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV  232 (345)
T ss_dssp             EEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred             EEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence            999999999999999999999999998 22334567888999999999999999999999999999999974311     


Q ss_pred             ---------cceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc--------eEEEe--ecCCceeEEEEc
Q psy8152         266 ---------KPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK--------LLRKD--YMQSRLTSILVR  325 (444)
Q Consensus       266 ---------~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~--------~~~~~--~~~~~i~~~~~~  325 (444)
                               +++..+.+ |...|.+++|+|++.+|++++.|+.|++|+...+.        +....  .|...|++++|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~  312 (345)
T 3fm0_A          233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN  312 (345)
T ss_dssp             CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred             eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence                     23344554 88899999999999999999999999999987642        11111  378899999998


Q ss_pred             CCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         326 SDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       326 ~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      ++-        ..+++|++.|++|++|++...+..
T Consensus       313 p~~--------~~~laS~s~Dg~v~~W~~~~~~~~  339 (345)
T 3fm0_A          313 PKE--------PGLLASCSDDGEVAFWKYQRPEGL  339 (345)
T ss_dssp             SSS--------TTEEEEEETTSCEEEEEECC----
T ss_pred             CCC--------ceEEEEcCCCCcEEEEEecCCCCc
Confidence            652        147999999999999998865543

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=5.2e-44  Score=326.98  Aligned_cols=271  Identities=13%  Similarity=0.157  Sum_probs=237.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--ccce
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--NTNT   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~   81 (444)
                      +++.+|++|+.||.|++|++.+++.    +..+.  .|...|.+++|+ |++.+|++|+.|+.|++|++.+...  ....
T Consensus        65 ~d~~~l~s~s~Dg~v~iWd~~~~~~----~~~~~--~~~~~v~~~~~s-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~  137 (340)
T 1got_B           65 TDSRLLLSASQDGKLIIWDSYTTNK----VHAIP--LRSSWVMTCAYA-PSGNYVACGGLDNICSIYNLKTREGNVRVSR  137 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTCCE----EEEEE--CSSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTCSBSCEEEE
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCCc----ceEee--cCCccEEEEEEC-CCCCEEEEEeCCCeEEEEECccCCCcceeEE
Confidence            4568999999999999999988764    22222  789999999999 7999999999999999999986542  1222


Q ss_pred             eeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          82 DVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        82 ~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      ...+|...|.++.+ .+..+++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||++++.
T Consensus       138 ~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~  217 (340)
T 1got_B          138 ELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM  217 (340)
T ss_dssp             EEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred             EecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence            33477778876632 23458999999999999999999888788899999999999999999999999999999999999


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC--CCCCeeEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI--PDVALSCI  238 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~  238 (444)
                      ++..+..|..                  .|++++|+|++++|++|+.|++|++||++   ....+..+..  +...|+++
T Consensus       218 ~~~~~~~h~~------------------~v~~v~~~p~~~~l~s~s~d~~v~iwd~~---~~~~~~~~~~~~~~~~v~~~  276 (340)
T 1got_B          218 CRQTFTGHES------------------DINAICFFPNGNAFATGSDDATCRLFDLR---ADQELMTYSHDNIICGITSV  276 (340)
T ss_dssp             EEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCTTCCSCEEEE
T ss_pred             eEEEEcCCcC------------------CEEEEEEcCCCCEEEEEcCCCcEEEEECC---CCcEEEEEccCCcccceEEE
Confidence            9988888877                  79999999999999999999999999999   5666665543  23479999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      +|+|++++|++|+.|+.|++||+.+ ++.+..+.+|...|++++|+|++.+|++|+.|+.|+||+
T Consensus       277 ~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          277 SFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EECCCCCEEEEECCCCeEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            9999999999999999999999999 999999999999999999999999999999999999996

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=2.7e-44  Score=325.76  Aligned_cols=281  Identities=12%  Similarity=0.165  Sum_probs=243.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cccceeeccccccEEE--EEeCCCeEEEEecCCcEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLW  112 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw  112 (444)
                      +|.+.|++++|+|..+++|++|+.|++|++|++....     .+..+  .+|...|.+  ++|++++|++++.|++|++|
T Consensus        15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~--~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~w   92 (319)
T 3frx_A           15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF--KGHSHIVQDCTLTADGAYALSASWDKTLRLW   92 (319)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE--eCCcccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence            8999999999994345899999999999999986432     23334  467777765  57899999999999999999


Q ss_pred             EcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         113 RYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       113 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                      |+.+++++..+.+|...|.+++|+|++.+|++|+.|++|++||++ ++++..+.+|..                  +|.+
T Consensus        93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~------------------~v~~  153 (319)
T 3frx_A           93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND------------------WVSQ  153 (319)
T ss_dssp             ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS------------------CEEE
T ss_pred             ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC------------------cEEE
Confidence            999999888888999999999999999999999999999999997 456667777766                  7899


Q ss_pred             EEEecC------CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc
Q psy8152         193 ISFLPN------SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK  266 (444)
Q Consensus       193 ~~~~~~------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  266 (444)
                      ++|+|.      +.+|++++.|+.|++||++   .......+.+|...|.+++|+|++++|++|+.||.|+|||+.+ ++
T Consensus       154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~---~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~-~~  229 (319)
T 3frx_A          154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN---QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA-KK  229 (319)
T ss_dssp             EEECCC------CCEEEEEETTSCEEEEETT---TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TE
T ss_pred             EEEccCCCCCCCccEEEEEeCCCEEEEEECC---cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-Cc
Confidence            999885      3589999999999999999   7788888999999999999999999999999999999999999 99


Q ss_pred             ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---------cCCceeEEEEcCCCcccccchhh
Q psy8152         267 PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---------MQSRLTSILVRSDFSLENETKKE  337 (444)
Q Consensus       267 ~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~  337 (444)
                      ++..+.. ...|.+++|+|++.+|++++.+ .+++|++..+.++..+.         +...+.+++|+         |++
T Consensus       230 ~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---------pdg  298 (319)
T 3frx_A          230 AMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS---------ADG  298 (319)
T ss_dssp             EEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC---------TTS
T ss_pred             EEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEEC---------CCC
Confidence            9988885 4689999999999999888755 59999999877766543         34567888887         446


Q ss_pred             hhccccccCCCccccCCCc
Q psy8152         338 EQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       338 ~~~~s~~~d~~i~~W~~~~  356 (444)
                      +++++++.|+.|+||++.+
T Consensus       299 ~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          299 QTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             SEEEEEETTSCEEEEEEEE
T ss_pred             CEEEEeecCceEEEEEEee
Confidence            8999999999999999764

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-44  Score=339.60  Aligned_cols=319  Identities=10%  Similarity=0.172  Sum_probs=262.9

Q ss_pred             cccEEEe----------cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-
Q psy8152           6 DYNIYIG----------SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-   74 (444)
Q Consensus         6 ~~~l~~g----------~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-   74 (444)
                      ..+|++|          +.+|.|++|++.++...    +.+..+.|...|++++|+ |++.+|++|+.||.|++|++.+ 
T Consensus        25 ~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~v~vw~~~~~   99 (416)
T 2pm9_A           25 IPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE----KPIASLQVDSKFNDLDWS-HNNKIIAGALDNGSLELYSTNEA   99 (416)
T ss_dssp             SCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC----SCSCCCCCSSCEEEEEEC-SSSSCEEEEESSSCEEEECCSST
T ss_pred             CCEEEEEecCcccccccCCCCeEEEEEccCCCCC----cEEEEEecCCceEEEEEC-CCCCeEEEEccCCeEEEeecccc
Confidence            3589999          88999999999887631    233334789999999999 7999999999999999999987 


Q ss_pred             ---CccccceeeccccccEEE--EEeC-CCeEEEEecCCcEEEEEcCCCC------ccc---cccccCCCeEEEEEecc-
Q psy8152          75 ---KNFNTNTDVSFGEGDIVG--VSRY-DECILTAVKSGDVKLWRYKTEP------DQW---TNFNVGPQLECMKHNKH-  138 (444)
Q Consensus        75 ---~~~~~~~~~~~~~~~v~~--~s~~-~~~l~~~~~dg~i~iw~~~~~~------~~~---~~~~~~~~v~~~~~~~~-  138 (444)
                         .+....+.  +|...|.+  ++|+ +++|++++.|+.|++|++.+++      ...   ....|...|.+++|+|+ 
T Consensus       100 ~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  177 (416)
T 2pm9_A          100 NNAINSMARFS--NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL  177 (416)
T ss_dssp             TSCCCEEEECC--CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC
T ss_pred             cccccchhhcc--CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC
Confidence               23444443  66666655  4676 8899999999999999999876      322   23568999999999997 


Q ss_pred             CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCc---eEEEE
Q psy8152         139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQG---YVRVY  214 (444)
Q Consensus       139 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~---~i~i~  214 (444)
                      +.+|++++.|+.|++||+++++.+..+..+..            ...+...|++++|+|++ .+|++++.++   .|++|
T Consensus       178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~  245 (416)
T 2pm9_A          178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSP------------NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW  245 (416)
T ss_dssp             TTEEEEESSSSCEEEEETTTTEEEEEECCCCC------------SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred             CcEEEEEcCCCCEEEEECCCCCcceEEecccc------------ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence            78999999999999999999988887766521            00012269999999997 7999999999   99999


Q ss_pred             EcCCCCCc-cceEEEe-CCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEE
Q psy8152         215 DPKITTQR-RPVLKVD-IPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLI  290 (444)
Q Consensus       215 d~~~~~~~-~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l  290 (444)
                      |++   .. .++..+. +|...|.+++|+| ++++|++++.||.|++||+++ ++++..+.+|...|++++|+|++ .+|
T Consensus       246 d~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l  321 (416)
T 2pm9_A          246 DLR---NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLF  321 (416)
T ss_dssp             ETT---STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred             eCC---CCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEE
Confidence            999   43 5666777 8999999999999 899999999999999999999 99999999999999999999999 899


Q ss_pred             EEEECCCcEEEEEcCCCceEEEee------------------------------------cCCceeEEEEcCCCcccccc
Q psy8152         291 LSVSLDRHFRVHDFHSKKLLRKDY------------------------------------MQSRLTSILVRSDFSLENET  334 (444)
Q Consensus       291 ~s~~~dg~i~vw~~~~~~~~~~~~------------------------------------~~~~i~~~~~~~~~~~~~~~  334 (444)
                      ++++.|+.|++|++.+........                                    +..++.+++|+         
T Consensus       322 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---------  392 (416)
T 2pm9_A          322 ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWA---------  392 (416)
T ss_dssp             EECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEE---------
T ss_pred             EEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEe---------
Confidence            999999999999998765322110                                    33445556655         


Q ss_pred             hhhhhccccccCCCccccCCCc
Q psy8152         335 KKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       335 ~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      |+++++++++.|+.|+||++..
T Consensus       393 ~dg~~la~~~~d~~v~~w~~~~  414 (416)
T 2pm9_A          393 FGGKLVQITPDGKGVSITNPKI  414 (416)
T ss_dssp             TTTEEECBCTTSSCBCCBCCCC
T ss_pred             eCCeEEEEeCCCCeEEEEEecc
Confidence            5678999999999999999874

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-44  Score=324.98  Aligned_cols=286  Identities=13%  Similarity=0.108  Sum_probs=228.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--ccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--NTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|..+|++++|+ ++  +|++|+.|++|++|++.++..  ...+...+|...|.++  +|++++|++++.|++|++|++.
T Consensus        12 ~h~~~v~~~~~s-~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~   88 (330)
T 2hes_X           12 LYKEKIWSFDFS-QG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE   88 (330)
T ss_dssp             CCSSCEEEEEEE-TT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred             cCCCceeeeccC-CC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence            899999999999 44  999999999999999987542  3333222377777665  6889999999999999999985


Q ss_pred             CC-------CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC----ceeeeeeecccceeeEeeeCCCcccc
Q psy8152         116 TE-------PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT----TKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       116 ~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      ..       +++..+.+|...|.+++|+|++++|++|+.|++|++||++.    .+++..+..|..              
T Consensus        89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--------------  154 (330)
T 2hes_X           89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ--------------  154 (330)
T ss_dssp             ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--------------
T ss_pred             cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--------------
Confidence            32       33445678999999999999999999999999999999953    245666777766              


Q ss_pred             cCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC--CCEEEEEcCCCcEEEEEcC
Q psy8152         185 RRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ--SHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~  262 (444)
                          .|++++|+|++.+|++++.|++|++|++. .....++..+.+|...|.+++|+|+  +.+|++|+.|++|++|++.
T Consensus       155 ----~v~~v~~~p~~~~l~s~s~D~~i~iW~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~  229 (330)
T 2hes_X          155 ----DVKHVIWHPSEALLASSSYDDTVRIWKDY-DDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM  229 (330)
T ss_dssp             ----CEEEEEECSSSSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred             ----ceEEEEECCCCCEEEEEcCCCeEEEEECC-CCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence                79999999999999999999999999987 2233678889999999999999998  7789999999999999997


Q ss_pred             CCC--------cceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc--eEEEe--ecCC-ceeEEEEcCCC
Q psy8152         263 GKG--------KPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK--LLRKD--YMQS-RLTSILVRSDF  328 (444)
Q Consensus       263 ~~~--------~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~--~~~~~--~~~~-~i~~~~~~~~~  328 (444)
                      . +        .++..+.+ |...|++++|++++ +|++++.||.|+||+..+++  ++...  .|.. .|++++|++. 
T Consensus       230 ~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~-  306 (330)
T 2hes_X          230 G-DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLEL-  306 (330)
T ss_dssp             E-ECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred             C-CCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecC-
Confidence            6 4        34455555 89999999999765 89999999999999998874  33333  2665 8999998863 


Q ss_pred             cccccchhhhhccccccCCCccccCCCc
Q psy8152         329 SLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                            .++.++++++.|++|+||++..
T Consensus       307 ------~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          307 ------NGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             ---------CCEEEEETTSEEEEEEC--
T ss_pred             ------CCceEEEEecCCCcEEEEEecc
Confidence                  2457899999999999999763

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=4e-44  Score=327.06  Aligned_cols=282  Identities=14%  Similarity=0.152  Sum_probs=225.2

Q ss_pred             CCcccEEEecCCCcEEEEEcCCC-----ccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKD-----KCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~-----~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      .++..|++++ ++++++|+....     ......-.......|...|++++|+ ++ +.|++|+.||+|+|||+.+++..
T Consensus        40 ~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~d-~~l~~~s~dg~v~lWd~~~~~~~  116 (344)
T 4gqb_B           40 SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV-GE-RGILVASDSGAVELWELDENETL  116 (344)
T ss_dssp             TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE-TT-TEEEEEETTSEEEEEEECTTSSC
T ss_pred             CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe-CC-CeEEEEECCCEEEEEeccCCCce
Confidence            3455566555 778888863211     0000000011112467889999999 55 67889999999999999988876


Q ss_pred             ccee--eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEE
Q psy8152          79 TNTD--VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKL  153 (444)
Q Consensus        79 ~~~~--~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v  153 (444)
                      ..+.  ..+|...|.++  +|++++|++|+.|++|++||+.+++++..+.+|...|++++|+|++ .+|++++.|++|++
T Consensus       117 ~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~i  196 (344)
T 4gqb_B          117 IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILL  196 (344)
T ss_dssp             EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred             eEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccc
Confidence            5443  45788888765  6899999999999999999999999998888999999999999976 57899999999999


Q ss_pred             EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC
Q psy8152         154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD  232 (444)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~  232 (444)
                      ||+++++++..+.....                ...+++++|+|++ ++|++|+.|++|++||++   ..+++.++.+|.
T Consensus       197 wd~~~~~~~~~~~~~~~----------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~---~~~~~~~~~~h~  257 (344)
T 4gqb_B          197 WDTRCPKPASQIGCSAP----------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK---STSCVLSSAVHS  257 (344)
T ss_dssp             EETTSSSCEEECC--------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESC---C--CCEEEECCS
T ss_pred             ccccccceeeeeeccee----------------eccceeeeecCCCCcceEEeccCCcEEEEECC---CCcEEEEEcCCC
Confidence            99999988877654332                2258999999965 789999999999999999   788899999999


Q ss_pred             CCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCce
Q psy8152         233 VALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       233 ~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      ..|++++|+|++ ++|++|+.|++|+|||+.+ +++ ..+.+|...|++++|+|+++ +|++++.|++|++|++.+..+
T Consensus       258 ~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~  334 (344)
T 4gqb_B          258 QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-SEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL  334 (344)
T ss_dssp             SCEEEEEECSSSSCCEEEEETTSCEEEECTTC-CEE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred             CCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-CcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence            999999999997 5799999999999999998 664 46789999999999999986 677999999999999987543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=2.6e-43  Score=318.60  Aligned_cols=282  Identities=16%  Similarity=0.212  Sum_probs=249.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...|++++|+ |++++|++|+.|+.|++|++.+++....+.  +|...|.++  +|++++|++++.|+.|++|++.++
T Consensus        21 gh~~~v~~~~~s-~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~   97 (312)
T 4ery_A           21 GHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG   97 (312)
T ss_dssp             CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             ccCCcEEEEEEC-CCCCEEEEeeCCCeEEEEeCCCcccchhhc--cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence            899999999999 799999999999999999999888877765  667777655  688999999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +++..+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|..                  +|.+++|+|
T Consensus        98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~  159 (312)
T 4ery_A           98 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD------------------PVSAVHFNR  159 (312)
T ss_dssp             CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS------------------CEEEEEECT
T ss_pred             cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC------------------cEEEEEEcC
Confidence            98888888999999999999999999999999999999999998888887776                  799999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      ++++|++++.|+.|++||++   ..+.+..+. .+...+..++|+|++++|++++.|+.|++||+++ ++++..+.+|..
T Consensus       160 ~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~  235 (312)
T 4ery_A          160 DGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLKTYTGHKN  235 (312)
T ss_dssp             TSSEEEEEETTSCEEEEETT---TCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEECSSCC
T ss_pred             CCCEEEEEeCCCcEEEEECC---CCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEEecCC
Confidence            99999999999999999999   666666554 4566899999999999999999999999999999 999999998876


Q ss_pred             ceeE--EEec-CCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccc--cCCCcc
Q psy8152         277 CVKD--IACP-LNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEE--KGDSDE  350 (444)
Q Consensus       277 ~i~~--~~~s-~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~i~  350 (444)
                      .+.+  ..++ +++.+|++|+.||.|++|++.+++++..+. |...|.+++|++.         +.++++++  .|++|+
T Consensus       236 ~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~---------~~~l~s~~~~~d~~i~  306 (312)
T 4ery_A          236 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT---------ENIIASAALENDKTIK  306 (312)
T ss_dssp             SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS---------SSEEEEEECTTTCCEE
T ss_pred             ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc---------CCceEEEEccCCccEE
Confidence            5433  2343 678899999999999999999999988876 8889999999865         46777775  699999


Q ss_pred             ccCCC
Q psy8152         351 KYDPE  355 (444)
Q Consensus       351 ~W~~~  355 (444)
                      +|+..
T Consensus       307 ~W~~d  311 (312)
T 4ery_A          307 LWKSD  311 (312)
T ss_dssp             EEECC
T ss_pred             EecCC
Confidence            99853

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=8.3e-43  Score=320.56  Aligned_cols=271  Identities=18%  Similarity=0.220  Sum_probs=235.9

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc----ccc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN----FNT   79 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~----~~~   79 (444)
                      +++.+|++|+.||.|++|+..+++.    ...+.  .|...|.+++|+ |++.+|++|+.|+.+++|++....    ...
T Consensus        74 ~d~~~l~s~s~Dg~v~vWd~~~~~~----~~~~~--~~~~~v~~~~~s-p~g~~lasg~~d~~i~v~~~~~~~~~~~~~~  146 (354)
T 2pbi_B           74 KDKRRIVSSSQDGKVIVWDSFTTNK----EHAVT--MPCTWVMACAYA-PSGCAIACGGLDNKCSVYPLTFDKNENMAAK  146 (354)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTCCE----EEEEE--CSSSCCCEEEEC-TTSSEEEEESTTSEEEEEECCCCTTCCSGGG
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCc----ceEEe--cCCCCEEEEEEC-CCCCEEEEeeCCCCEEEEEEecccccccccc
Confidence            4568999999999999999887764    12222  678899999999 799999999999999999986432    112


Q ss_pred             ceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEE
Q psy8152          80 NTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWD  155 (444)
Q Consensus        80 ~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd  155 (444)
                      ......|...|.++  +|++..|++++.|++|++||+.+++++..+.+|...|.+++|+|  ++++|++|+.||.|++||
T Consensus       147 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd  226 (354)
T 2pbi_B          147 KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD  226 (354)
T ss_dssp             CEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEE
T ss_pred             ceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence            22334667777654  67889999999999999999999999888888999999999988  578999999999999999


Q ss_pred             cCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--CC
Q psy8152         156 LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--DV  233 (444)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~  233 (444)
                      +++++++..+..|..                  .|++++|+|++.+|++++.|++|++||++   ....+..+..+  ..
T Consensus       227 ~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~~l~s~s~D~~v~lwd~~---~~~~~~~~~~~~~~~  285 (354)
T 2pbi_B          227 MRSGQCVQAFETHES------------------DVNSVRYYPSGDAFASGSDDATCRLYDLR---ADREVAIYSKESIIF  285 (354)
T ss_dssp             TTTCCEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCTTCCS
T ss_pred             CCCCcEEEEecCCCC------------------CeEEEEEeCCCCEEEEEeCCCeEEEEECC---CCcEEEEEcCCCccc
Confidence            999999988888777                  79999999999999999999999999999   55555555433  34


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      .+.+++|+|++++|++|+.|+.|++||+.+ ++++..+.+|...|++++|+|++++|++|+.|++|+||+
T Consensus       286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          286 GASSVDFSLSGRLLFAGYNDYTINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             ceeEEEEeCCCCEEEEEECCCcEEEEECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            688999999999999999999999999999 999999999999999999999999999999999999995

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.4e-43  Score=322.02  Aligned_cols=284  Identities=12%  Similarity=0.180  Sum_probs=233.6

Q ss_pred             CcccceEEEee-----eccCCcEEEEEEcCCeEEEEeCCCCccc-----cceeeccccccEEEE--EeCCCeEEEEecCC
Q psy8152          40 TNKASVLALNW-----GNVEESELLIAYSGQKIKIYDTDFKNFN-----TNTDVSFGEGDIVGV--SRYDECILTAVKSG  107 (444)
Q Consensus        40 ~h~~~v~~~~~-----~~~~~~~l~~~~~d~~i~vw~~~~~~~~-----~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg  107 (444)
                      +|...|++++|     +++++.+|++|+.|++|++|++...+..     ....+.+|...|.++  +|++.+|++++.|+
T Consensus        19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~   98 (343)
T 2xzm_R           19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDK   98 (343)
T ss_dssp             CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTS
T ss_pred             cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCC
Confidence            89999999999     6348999999999999999998754321     112234777777665  67899999999999


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeee---cccceeeEeeeCCCcccc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK---NVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  184 (444)
                      +|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.... .....   .|..              
T Consensus        99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~--------------  163 (343)
T 2xzm_R           99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSD--------------  163 (343)
T ss_dssp             EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSS--------------
T ss_pred             cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCc--------------
Confidence            99999999999888888999999999999999999999999999999998433 32222   2333              


Q ss_pred             cCccceeEEEEecCC----------CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152         185 RRPVWVNGISFLPNS----------DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                          +|.+++|+|++          .+|++++.|+.|++||..    ......+.+|...|.+++|+|++++|++|+.||
T Consensus       164 ----~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg  235 (343)
T 2xzm_R          164 ----WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTFKAHESNVNHLSISPNGKYIATGGKDK  235 (343)
T ss_dssp             ----CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTC
T ss_pred             ----eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEEcCccccceEEEECCCCCEEEEEcCCC
Confidence                78999999886          789999999999999955    566778889999999999999999999999999


Q ss_pred             cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE--Ee------------ecCCcee
Q psy8152         255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR--KD------------YMQSRLT  320 (444)
Q Consensus       255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~--~~------------~~~~~i~  320 (444)
                      .|++||+.....+...+. +...|++++|+|++++|++ +.|+.|++|++.+++...  .+            .|...+.
T Consensus       236 ~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  313 (343)
T 2xzm_R          236 KLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCT  313 (343)
T ss_dssp             EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEE
T ss_pred             eEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceE
Confidence            999999965244555553 5567999999999987765 467889999998866543  22            2556788


Q ss_pred             EEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                      +++|+++         +.++++++.||.|++|++..+
T Consensus       314 ~~~~sp~---------g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          314 SLAWNAL---------GKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             EEEECSS---------SCCEEEEETTSEEEEEEEEEE
T ss_pred             EEEECCC---------CCeEEEecCCceEEEEEEEcc
Confidence            9998854         578999999999999997654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.6e-43  Score=325.59  Aligned_cols=280  Identities=13%  Similarity=0.140  Sum_probs=226.3

Q ss_pred             CCCcccEEEecC------CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152           3 LADDYNIYIGSS------TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN   76 (444)
Q Consensus         3 ~~~~~~l~~g~~------dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~   76 (444)
                      ++++.+|++|+.      |+.|++|+..++.......  ....+|...|++++|+ |++ .+++++.||+|+|||+.+++
T Consensus        51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~--~~~~~~~~~V~~~~~s-~d~-~~l~~s~dg~v~lWd~~~~~  126 (357)
T 4g56_B           51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC--TAGVQTEAGVTDVAWV-SEK-GILVASDSGAVELWEILEKE  126 (357)
T ss_dssp             CSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC--SEEEECSSCEEEEEEE-TTT-EEEEEETTSCEEEC------
T ss_pred             CCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe--cccCCCCCCEEEEEEc-CCC-CEEEEECCCEEEEeeccccc
Confidence            357789999987      7789999887665311111  1122789999999999 565 56678889999999998877


Q ss_pred             cccc--eeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccC-CEEEEeeCCCeE
Q psy8152          77 FNTN--TDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDL  151 (444)
Q Consensus        77 ~~~~--~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i  151 (444)
                      ....  +...+|...|.++  +|++++|++++.|+.|++||+.+++++..+..|...|++++|+|++ .++++++.|+.|
T Consensus       127 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v  206 (357)
T 4g56_B          127 SLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI  206 (357)
T ss_dssp             --CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE
T ss_pred             eeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce
Confidence            5543  3445778888765  6899999999999999999999999888888899999999999966 588999999999


Q ss_pred             EEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152         152 KLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDI  230 (444)
Q Consensus       152 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  230 (444)
                      ++||+++++++..+.....                ...+++++|+|++ .+|++|+.|+.|++||++   ..+++..+.+
T Consensus       207 ~~wd~~~~~~~~~~~~~~~----------------~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~---~~~~~~~~~~  267 (357)
T 4g56_B          207 LLWDTRKPKPATRIDFCAS----------------DTIPTSVTWHPEKDDTFACGDETGNVSLVNIK---NPDSAQTSAV  267 (357)
T ss_dssp             EECCTTSSSCBCBCCCTTC----------------CSCEEEEEECTTSTTEEEEEESSSCEEEEESS---CGGGCEEECC
T ss_pred             EEEECCCCceeeeeeeccc----------------cccccchhhhhcccceEEEeecccceeEEECC---CCcEeEEEec
Confidence            9999999887765543332                2369999999985 789999999999999999   7888999999


Q ss_pred             CCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecC-CCCEEEEEECCCcEEEEEcCCC
Q psy8152         231 PDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       231 ~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      |...|++++|+|++ ++|++|+.|++|+|||+++ ++++..+ +|...|++|+|+| ++.+|++++.||+|++|++.+.
T Consensus       268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            99999999999987 6799999999999999998 8777655 7999999999998 7899999999999999999763

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.6e-43  Score=319.83  Aligned_cols=286  Identities=13%  Similarity=0.141  Sum_probs=230.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.||.|+||++..+....   ......+|...|++++|+ |++++|++|+.|++|+||++..+.......+
T Consensus        26 p~g~~las~~~D~~i~iw~~~~~~~~~---~~~~~~~h~~~v~~~~~s-p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~  101 (345)
T 3fm0_A           26 PAGTLLASCGGDRRIRIWGTEGDSWIC---KSVLSEGHQRTVRKVAWS-PCGNYLASASFDATTCIWKKNQDDFECVTTL  101 (345)
T ss_dssp             TTSSCEEEEETTSCEEEEEEETTEEEE---EEEECSSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred             CCCCEEEEEcCCCeEEEEEcCCCccee---eeeeccccCCcEEEEEEC-CCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence            467899999999999999998775311   111112899999999999 7999999999999999999987754433444


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc---cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD---QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~  158 (444)
                      .+|...|.++  +|++++|++++.|++|++|++..+..   +..+..|...|.+++|+|++.+|++|+.|+.|++|++..
T Consensus       102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~  181 (345)
T 3fm0_A          102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE  181 (345)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred             cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence            5788888665  68899999999999999999987643   335667999999999999999999999999999999988


Q ss_pred             ce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC------------ccc
Q psy8152         159 TK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ------------RRP  224 (444)
Q Consensus       159 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~~~  224 (444)
                      +.  +...+.+|..                  .|++++|+|++++|++++.|++|++|+......            ..+
T Consensus       182 ~~~~~~~~~~~h~~------------------~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T 3fm0_A          182 DDWVCCATLEGHES------------------TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC  243 (345)
T ss_dssp             TEEEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred             CCEEEEEEecCCCC------------------ceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence            65  4456666666                  799999999999999999999999999741111            123


Q ss_pred             eEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc----c-----eeEeccccCceeEEEecCCC-CEEEEE
Q psy8152         225 VLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK----P-----CYKYKGFAGCVKDIACPLNE-NLILSV  293 (444)
Q Consensus       225 ~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~-----~~~~~~h~~~i~~~~~s~~~-~~l~s~  293 (444)
                      +..+.+ |...|.+++|+|++.+|++++.|+.|++|+... ..    +     ...+.+|...|++++|+|++ .+||++
T Consensus       244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~  322 (345)
T 3fm0_A          244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP-NSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC  322 (345)
T ss_dssp             EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT-TSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred             eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC-CCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence            344444 788999999999999999999999999999875 32    1     12335799999999999998 599999


Q ss_pred             ECCCcEEEEEcCCCceEEE
Q psy8152         294 SLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       294 ~~dg~i~vw~~~~~~~~~~  312 (444)
                      +.||+|++|++.+++.+..
T Consensus       323 s~Dg~v~~W~~~~~~~~~~  341 (345)
T 3fm0_A          323 SDDGEVAFWKYQRPEGLHH  341 (345)
T ss_dssp             ETTSCEEEEEECC------
T ss_pred             CCCCcEEEEEecCCCCccc
Confidence            9999999999998776543

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.9e-42  Score=339.77  Aligned_cols=306  Identities=16%  Similarity=0.212  Sum_probs=266.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++..|++++.+|.|++|+.....     +..+.  +|...|++++|+ |++.+|++++.|+.|++|+.. ++....+. 
T Consensus       231 ~dg~~l~~~~~d~~i~~w~~~~~~-----~~~~~--~~~~~v~~v~~~-~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~-  300 (577)
T 2ymu_A          231 PDGQTIASASDDKTVKLWNRNGQL-----LQTLT--GHSSSVNGVAFR-PDGQTIASASDDKTVKLWNRN-GQLLQTLT-  300 (577)
T ss_dssp             TTSSCEEEEETTSCEEEECTTSCE-----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT-SCEEEEEC-
T ss_pred             CCCCEEEEEeCCCEEEEEeCCCCE-----EEEEe--cCCCCEEEEEEc-CCCCEEEEEeCCCEEEEEeCC-CcEEEEEe-
Confidence            456789999999999999964332     23333  799999999999 799999999999999999974 55555554 


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       +|...|.++  +|++++|++++.|+.|++|++...... .+..|...|.+++|+|++++|++++.++.|++|+. +++.
T Consensus       301 -~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~  377 (577)
T 2ymu_A          301 -GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ-TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQL  377 (577)
T ss_dssp             -CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCE
T ss_pred             -cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE-EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCE
Confidence             667777654  788999999999999999998765544 57789999999999999999999999999999995 5677


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+..|..                  .|++++|+|++++|++++.|+.|++|+..    .+.+..+..|...|++++|+
T Consensus       378 ~~~~~~~~~------------------~v~~~~~s~dg~~l~~~~~d~~v~~~~~~----~~~~~~~~~~~~~v~~~~~s  435 (577)
T 2ymu_A          378 LQTLTGHSS------------------SVRGVAFSPDGQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVWGVAFS  435 (577)
T ss_dssp             EEEEECCSS------------------CEEEEEECTTSSCEEEEETTSEEEEECTT----CCEEEEEECCSSCEEEEEEC
T ss_pred             EEEecCCCC------------------CeEEEEECCCCCEEEEEeCCCEEEEEeCC----CCEEEEecCCCCCeEEEEEC
Confidence            777777776                  79999999999999999999999999965    56778889999999999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT  320 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~  320 (444)
                      |++++|++++.|+.|++|++ + ++.+..+.+|...|++++|+|++++|++++.|+.|++|+. +++++..+. |...|+
T Consensus       436 ~d~~~l~~~~~d~~v~~w~~-~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~  512 (577)
T 2ymu_A          436 PDDQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR  512 (577)
T ss_dssp             TTSSEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEcCCCEEEEEEC-C-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEE
Confidence            99999999999999999996 4 6888999999999999999999999999999999999996 567767665 889999


Q ss_pred             EEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      +++|+++         +++|++++.|+.|++|+...
T Consensus       513 ~l~~s~d---------g~~l~s~~~dg~v~lwd~~~  539 (577)
T 2ymu_A          513 GVAFSPD---------GQTIASASDDKTVKLWNRNG  539 (577)
T ss_dssp             EEEECTT---------SSCEEEEETTSEEEEECTTS
T ss_pred             EEEEcCC---------CCEEEEEECcCEEEEEeCCC
Confidence            9999854         67899999999999999753

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.4e-43  Score=328.81  Aligned_cols=314  Identities=10%  Similarity=0.032  Sum_probs=264.0

Q ss_pred             Ccc-cEEEecCCCcEEEEEc----CCCcc-----ceeeeeeecc-----cCcccceEEEeeeccCCcEEEEEEcCCeEEE
Q psy8152           5 DDY-NIYIGSSTGAFKGVNL----SKDKC-----IIKNIQNVKY-----ITNKASVLALNWGNVEESELLIAYSGQKIKI   69 (444)
Q Consensus         5 ~~~-~l~~g~~dg~i~i~~~----~~~~~-----~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~v   69 (444)
                      ++. +|++|+.+|.|++|++    .+++.     ....+.....     .+|...|++++|+ |++.+|++|+.||.|++
T Consensus        56 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i  134 (425)
T 1r5m_A           56 LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGELRL  134 (425)
T ss_dssp             SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC-TTSSEEEEEETTSCEEE
T ss_pred             CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc-CCCCEEEEEeCCCeEEE
Confidence            445 8999999999999999    77662     1111111000     0268899999999 79999999999999999


Q ss_pred             EeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC---------------eEE
Q psy8152          70 YDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ---------------LEC  132 (444)
Q Consensus        70 w~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------------v~~  132 (444)
                      |+ .+++....+.  .|...|.++  +|++++|++++.++.|++|++.+++.+..+..+...               +.+
T Consensus       135 ~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (425)
T 1r5m_A          135 WN-KTGALLNVLN--FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVD  211 (425)
T ss_dssp             EE-TTSCEEEEEC--CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSC
T ss_pred             Ee-CCCCeeeecc--CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeE
Confidence            99 5566666664  667777665  678999999999999999999998887766666665               999


Q ss_pred             EEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEE
Q psy8152         133 MKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVR  212 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  212 (444)
                      ++|+|++ .+++++.++.|++||+.+++.+..+..+..                  .|++++|+|++++|++++.|+.|+
T Consensus       212 ~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~l~~~~~d~~i~  272 (425)
T 1r5m_A          212 VEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHG------------------PISVLEFNDTNKLLLSASDDGTLR  272 (425)
T ss_dssp             CEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSS------------------CEEEEEEETTTTEEEEEETTSCEE
T ss_pred             EEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCC------------------ceEEEEECCCCCEEEEEcCCCEEE
Confidence            9999874 688899999999999999888888877766                  799999999999999999999999


Q ss_pred             EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      +||++   ....+..+..|...|.+++|+|++ +|++++.++.|++||+++ ++++..+..|...|++++|+|++++|++
T Consensus       273 i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~  347 (425)
T 1r5m_A          273 IWHGG---NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYAV  347 (425)
T ss_dssp             EECSS---SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEEE
T ss_pred             EEECC---CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEEE
Confidence            99999   778888888999999999999999 999999999999999999 9999999999999999999999999999


Q ss_pred             EECCCcEEEEEcCCCc--------------------eEEEee-cCC--ceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152         293 VSLDRHFRVHDFHSKK--------------------LLRKDY-MQS--RLTSILVRSDFSLENETKKEEQEHSEEKGDSD  349 (444)
Q Consensus       293 ~~~dg~i~vw~~~~~~--------------------~~~~~~-~~~--~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i  349 (444)
                      ++.||.|++|++.+++                    ++..+. |..  .|.+++|+++         +.++++++.|+.|
T Consensus       348 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~~~~dg~i  418 (425)
T 1r5m_A          348 AFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA---------GNKISVAYSLQEG  418 (425)
T ss_dssp             EETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT---------SSEEEEEESSSCC
T ss_pred             EECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC---------CceEEEEecCceE
Confidence            9999999999999888                    777665 544  8999999854         5789999999999


Q ss_pred             cccCCC
Q psy8152         350 EKYDPE  355 (444)
Q Consensus       350 ~~W~~~  355 (444)
                      ++|++.
T Consensus       419 ~iw~~~  424 (425)
T 1r5m_A          419 SVVAIP  424 (425)
T ss_dssp             EEEECC
T ss_pred             EEEeec
Confidence            999975

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.4e-42  Score=314.60  Aligned_cols=274  Identities=12%  Similarity=0.147  Sum_probs=233.9

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccc-eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCI-IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      ..+++|++|+.|+.|++|++...... ...+..+.  +|...|++++|+ |++.+|++|+.|++|+|||+.+++.+..+.
T Consensus        28 ~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s-~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~  104 (319)
T 3frx_A           28 GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK--GHSHIVQDCTLT-ADGAYALSASWDKTLRLWDVATGETYQRFV  104 (319)
T ss_dssp             SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             CCccEEEEecCCccEEEecCCCCCccccccceEEe--CCcccEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCCeeEEEc
Confidence            34578999999999999998754321 11122222  899999999999 799999999999999999999999888775


Q ss_pred             eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEecc------CCEEEEeeCCCeEEEE
Q psy8152          83 VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH------SNIIATGGKENDLKLW  154 (444)
Q Consensus        83 ~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~vw  154 (444)
                        +|...|.++  +|++.+|++++.|++|++|++.. +++..+.+|...|.+++|+|.      +.+|++++.|+.|++|
T Consensus       105 --~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w  181 (319)
T 3frx_A          105 --GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW  181 (319)
T ss_dssp             --CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEE
T ss_pred             --cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEE
Confidence              677777765  67889999999999999999974 455568889999999999984      4589999999999999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA  234 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  234 (444)
                      |+++.+....+.+|..                  .|++++|+|++++|++++.|++|++||+.   ..+++..+..+ ..
T Consensus       182 d~~~~~~~~~~~~h~~------------------~v~~~~~sp~g~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~-~~  239 (319)
T 3frx_A          182 NLNQFQIEADFIGHNS------------------NINTLTASPDGTLIASAGKDGEIMLWNLA---AKKAMYTLSAQ-DE  239 (319)
T ss_dssp             ETTTTEEEEEECCCCS------------------CEEEEEECTTSSEEEEEETTCEEEEEETT---TTEEEEEEECC-SC
T ss_pred             ECCcchhheeecCCCC------------------cEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCC-Cc
Confidence            9999988888888877                  79999999999999999999999999999   77788877754 57


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec--------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK--------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      |.+++|+|++.+|++++.+ .+++|++.. ...+..+.        .|...+.+++|+|+|++|++|+.||.|+||++.+
T Consensus       240 v~~~~~sp~~~~la~~~~~-~i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          240 VFSLAFSPNRYWLAAATAT-GIKVFSLDP-QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             EEEEEECSSSSEEEEEETT-EEEEEEETT-EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred             EEEEEEcCCCCEEEEEcCC-CcEEEEeCc-CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence            9999999999999988755 599999987 66666554        3466799999999999999999999999999875


Q ss_pred             C
Q psy8152         307 K  307 (444)
Q Consensus       307 ~  307 (444)
                      +
T Consensus       318 ~  318 (319)
T 3frx_A          318 A  318 (319)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.7e-42  Score=310.48  Aligned_cols=272  Identities=14%  Similarity=0.144  Sum_probs=234.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.||.|++|++.++..    +..+.  .|..+|.+++|+ |++++|++|+.|++|++||+.+++.+..+. 
T Consensus        23 p~~~~l~s~~~dg~v~lWd~~~~~~----~~~~~--~~~~~v~~~~~~-~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~-   94 (304)
T 2ynn_A           23 PTEPWVLTTLYSGRVELWNYETQVE----VRSIQ--VTETPVRAGKFI-ARKNWIIVGSDDFRIRVFNYNTGEKVVDFE-   94 (304)
T ss_dssp             SSSSEEEEEETTSEEEEEETTTTEE----EEEEE--CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CCCCEEEEEcCCCcEEEEECCCCce----eEEee--ccCCcEEEEEEe-CCCCEEEEECCCCEEEEEECCCCcEEEEEe-
Confidence            4678999999999999999988764    22233  789999999999 799999999999999999999999888775 


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                       +|...|.++  +|++++|++|+.|++|++||+.++.. ...+.+|...|.+++|+| ++.+|++|+.|+.|++||++++
T Consensus        95 -~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~  173 (304)
T 2ynn_A           95 -AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS  173 (304)
T ss_dssp             -CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred             -CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence             667777655  68899999999999999999987743 345678999999999999 7899999999999999999887


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      .+...+..+..                 ..+..+.|+|  ++.+|++++.|++|++||++   ...++..+.+|...|.+
T Consensus       174 ~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~---~~~~~~~~~~h~~~v~~  233 (304)
T 2ynn_A          174 TPNFTLTTGQE-----------------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKSCVATLEGHMSNVSF  233 (304)
T ss_dssp             SCSEEEECCCT-----------------TCEEEEEECCSTTCCEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEE
T ss_pred             CccceeccCCc-----------------CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC---CCccceeeCCCCCCEEE
Confidence            76655543321                 2588888886  66899999999999999999   78889999999999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC--EEEEEECCCcEEEEEcCC
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN--LILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~--~l~s~~~dg~i~vw~~~~  306 (444)
                      ++|+|++++|++|+.||.|++||+.+ ++++.++..|...+.+++|+|++.  ++++|+.+| +.+|++..
T Consensus       234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~  302 (304)
T 2ynn_A          234 AVFHPTLPIIISGSEDGTLKIWNSST-YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN  302 (304)
T ss_dssp             EEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred             EEECCCCCEEEEEcCCCeEEEEECCC-CceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence            99999999999999999999999999 999999999999999999999875  577766554 77887754

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.9e-42  Score=316.07  Aligned_cols=310  Identities=11%  Similarity=0.144  Sum_probs=261.9

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce--
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT--   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~--   81 (444)
                      +++..++++..++.+.+|......      ..+...+|...|++++|+ |++.+|++++ ||.|++|++.++.....+  
T Consensus        19 ~dg~~~~~~~~~~~~~~~~~~~~~------~~~~~~~h~~~v~~~~~~-~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~   90 (337)
T 1gxr_A           19 ADGQMQPVPFPPDALIGPGIPRHA------RQINTLNHGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ   90 (337)
T ss_dssp             SSSCEEECCCCTTSSSSTTCCSEE------EEEEEECCSSCCCEEEEC-SSSSEEEEEC-BSEEEEEETTSTTCCSCSEE
T ss_pred             CCCCEEEeecCCCcEeccccCCcc------ccceeccCCCceEEEEEe-cCCcEEEEcC-CCeEEEEECCCCCceeeeec
Confidence            455666666666665555332222      233334899999999999 7999999999 999999999877644333  


Q ss_pred             -eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC--ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          82 -DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP--DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        82 -~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                       ....|...+.++  +|++++|++++.++.|++|++.+++  ....+..|...|.+++|+|++++|++++.++.|++||+
T Consensus        91 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~  170 (337)
T 1gxr_A           91 LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  170 (337)
T ss_dssp             EECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             ccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence             223567777655  6789999999999999999999887  44456678999999999999999999999999999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                      ++++.+..+..+..                  .|.+++|+|++++|++++.|+.|++||++   ....+..+. +...+.
T Consensus       171 ~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~~~~~~-~~~~v~  228 (337)
T 1gxr_A          171 HNQTLVRQFQGHTD------------------GASCIDISNDGTKLWTGGLDNTVRSWDLR---EGRQLQQHD-FTSQIF  228 (337)
T ss_dssp             TTTEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT---TTEEEEEEE-CSSCEE
T ss_pred             CCCceeeeeecccC------------------ceEEEEECCCCCEEEEEecCCcEEEEECC---CCceEeeec-CCCceE
Confidence            99998888887776                  79999999999999999999999999999   666666654 677899


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ  316 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~  316 (444)
                      +++|+|++++|++++.++.|++|+++. .+. ..+..|...|++++|+|++++|++++.||.|++|++.+++.+....+.
T Consensus       229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~-~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~  306 (337)
T 1gxr_A          229 SLGYCPTGEWLAVGMESSNVEVLHVNK-PDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES  306 (337)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTS-SCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred             EEEECCCCCEEEEEcCCCcEEEEECCC-CCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCC
Confidence            999999999999999999999999997 554 567789999999999999999999999999999999999998777899


Q ss_pred             CceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         317 SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       317 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      ..+.+++|+++         +.++++++.|+.|++|++
T Consensus       307 ~~v~~~~~s~~---------~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          307 SSVLSCDISVD---------DKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             SCEEEEEECTT---------SCEEEEEETTSCEEEEEE
T ss_pred             CcEEEEEECCC---------CCEEEEecCCCeEEEEEE
Confidence            99999998854         578999999999999986

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=5.1e-42  Score=314.22  Aligned_cols=276  Identities=17%  Similarity=0.153  Sum_probs=224.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ++.+|++|+.|++|++|++...............+ +|...|++++|+ |++.+|++|+.|++|++||+.+++.+..+. 
T Consensus        38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~-~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~-  115 (343)
T 2xzm_R           38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS-QENCFAISSSWDKTLRLWDLRTGTTYKRFV-  115 (343)
T ss_dssp             CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC-SSTTEEEEEETTSEEEEEETTSSCEEEEEE-
T ss_pred             CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCcEEEEEc-
Confidence            67899999999999999997654211111112222 899999999999 799999999999999999999998887775 


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc--cccccCCCeEEEEEeccC----------CEEEEeeCCC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHS----------NIIATGGKEN  149 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~  149 (444)
                       +|...|.++  +|++++|++++.|++|++||+.......  ....|...|.+++|+|++          .+|++++.|+
T Consensus       116 -~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~  194 (343)
T 2xzm_R          116 -GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG  194 (343)
T ss_dssp             -CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred             -CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence             667777655  7899999999999999999997433221  123688999999999976          7899999999


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      .|++||. ..+....+..|..                  .|++++|+|++++|++|+.|+.|++||+.  ....+...+.
T Consensus       195 ~i~iwd~-~~~~~~~~~~h~~------------------~v~~~~~s~~g~~l~sgs~dg~v~iwd~~--~~~~~~~~~~  253 (343)
T 2xzm_R          195 RLKVWNT-NFQIRYTFKAHES------------------NVNHLSISPNGKYIATGGKDKKLLIWDIL--NLTYPQREFD  253 (343)
T ss_dssp             EEEEEET-TTEEEEEEECCSS------------------CEEEEEECTTSSEEEEEETTCEEEEEESS--CCSSCSEEEE
T ss_pred             EEEEEcC-CCceeEEEcCccc------------------cceEEEECCCCCEEEEEcCCCeEEEEECC--CCcccceeec
Confidence            9999994 4566677777776                  79999999999999999999999999995  1333444443


Q ss_pred             CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee--Eec-----------cccCceeEEEecCCCCEEEEEECC
Q psy8152         230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY--KYK-----------GFAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~-----------~h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                       +...|.+++|+|++.+|+++ .|+.|++|++.+ ++...  .+.           +|...|++++|+|++++|++|+.|
T Consensus       254 -~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D  330 (343)
T 2xzm_R          254 -AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT-QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD  330 (343)
T ss_dssp             -CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSS-CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred             -CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC-CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence             45569999999999887755 578899999987 55443  443           678899999999999999999999


Q ss_pred             CcEEEEEcCCC
Q psy8152         297 RHFRVHDFHSK  307 (444)
Q Consensus       297 g~i~vw~~~~~  307 (444)
                      |.|++|++.++
T Consensus       331 g~v~~w~~~~g  341 (343)
T 2xzm_R          331 GVIRTFSFETS  341 (343)
T ss_dssp             SEEEEEEEEEE
T ss_pred             ceEEEEEEEcc
Confidence            99999998654

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=8e-43  Score=324.07  Aligned_cols=276  Identities=12%  Similarity=0.202  Sum_probs=234.5

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FN   78 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~   78 (444)
                      +++.+|++|+.||.|++|++.+++.    ...+.  .|...|.+++|+ |++.+|++|+.|+.|++|++.+..     ..
T Consensus        76 p~~~~l~s~s~D~~v~iWd~~~~~~----~~~~~--~h~~~v~~~~~s-~~g~~las~~~d~~v~iw~~~~~~~~~~~~~  148 (380)
T 3iz6_a           76 PEKNWIVSASQDGRLIVWNALTSQK----THAIK--LHCPWVMECAFA-PNGQSVACGGLDSACSIFNLSSQADRDGNMP  148 (380)
T ss_dssp             TTSSCEEEEETTSEEEEEETTTTEE----EEEEE--CCCTTCCCCEEC-TTSSEEEECCSSSCCEEEECCCCSSCCCSST
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcc----ceEEe--cCCCCEEEEEEC-CCCCEEEEeeCCCcEEEEECCCCccccCCcc
Confidence            4668999999999999999988764    12233  799999999999 799999999999999999986532     11


Q ss_pred             cceeeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCCccccc-----cccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152          79 TNTDVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEPDQWTN-----FNVGPQLECMKHNK-HSNIIATGGKEN  149 (444)
Q Consensus        79 ~~~~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~  149 (444)
                      ......+|...+.++  .|+ +.+|++|+.|++|++||+.+++.+..+     .+|...|.+++|++ ++++|++|+.|+
T Consensus       149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~  228 (380)
T 3iz6_a          149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT  228 (380)
T ss_dssp             TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS
T ss_pred             ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC
Confidence            122234777777655  454 467999999999999999999877543     56899999999988 899999999999


Q ss_pred             eEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE
Q psy8152         150 DLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV  228 (444)
Q Consensus       150 ~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  228 (444)
                      .|++||++. ++.+..+.+|..                  .|++++|+|++++|++|+.|++|++||++   ...++..+
T Consensus       229 ~v~~wd~~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~---~~~~~~~~  287 (380)
T 3iz6_a          229 TVRLWDLRITSRAVRTYHGHEG------------------DINSVKFFPDGQRFGTGSDDGTCRLFDMR---TGHQLQVY  287 (380)
T ss_dssp             CEEEEETTTTCCCCEEECCCSS------------------CCCEEEECTTSSEEEEECSSSCEEEEETT---TTEEEEEE
T ss_pred             eEEEEECCCCCcceEEECCcCC------------------CeEEEEEecCCCeEEEEcCCCeEEEEECC---CCcEEEEe
Confidence            999999984 567777877777                  79999999999999999999999999999   66677666


Q ss_pred             eCCC-------CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe----ccccCceeEEEecCCCCEEEEEECCC
Q psy8152         229 DIPD-------VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY----KGFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       229 ~~~~-------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      ..+.       ..|++++|+|+|++|++|+.||.|++||+.. ++.+..+    .+|.+.|++++|+|++++|++|+.|+
T Consensus       288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~  366 (380)
T 3iz6_a          288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK  366 (380)
T ss_dssp             CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred             cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence            5432       2489999999999999999999999999998 8887777    57999999999999999999999999


Q ss_pred             cEEEEEcCCCc
Q psy8152         298 HFRVHDFHSKK  308 (444)
Q Consensus       298 ~i~vw~~~~~~  308 (444)
                      +|+||++...+
T Consensus       367 ~i~iW~~~~~~  377 (380)
T 3iz6_a          367 NLKIWAFSGHR  377 (380)
T ss_dssp             CEEEEECCSSS
T ss_pred             CEEEEecCCCc
Confidence            99999998654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.4e-41  Score=304.75  Aligned_cols=272  Identities=14%  Similarity=0.200  Sum_probs=237.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.||.|++|++..++.    ...+.  +|...|.+++|+ |++++|++|+.|+.|++|++.+++.+..+. 
T Consensus        33 ~~~~~l~s~~~dg~i~iw~~~~~~~----~~~~~--~h~~~v~~~~~~-~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-  104 (312)
T 4ery_A           33 PNGEWLASSSADKLIKIWGAYDGKF----EKTIS--GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLK-  104 (312)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCCE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CCCCEEEEeeCCCeEEEEeCCCccc----chhhc--cCCCceEEEEEc-CCCCEEEEECCCCEEEEEECCCCcEEEEEc-
Confidence            4567899999999999999987764    12222  799999999999 799999999999999999999998888775 


Q ss_pred             ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       +|...|.+  ++|++++|++++.|+.|++||+.+++.+..+..|..+|.+++|+|++++|++++.|+.|++||+++++.
T Consensus       105 -~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~  183 (312)
T 4ery_A          105 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC  183 (312)
T ss_dssp             -CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred             -CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence             56666655  578899999999999999999999998877888999999999999999999999999999999999887


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE--EE
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC--IT  239 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~--~~  239 (444)
                      +..+.....                 ..+.+++|+|++++|++++.|+.|++||++   ..+.+..+.+|...+.+  ..
T Consensus       184 ~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~  243 (312)
T 4ery_A          184 LKTLIDDDN-----------------PPVSFVKFSPNGKYILAATLDNTLKLWDYS---KGKCLKTYTGHKNEKYCIFAN  243 (312)
T ss_dssp             EEEECCSSC-----------------CCEEEEEECTTSSEEEEEETTTEEEEEETT---TTEEEEEECSSCCSSSCCCEE
T ss_pred             eeEEeccCC-----------------CceEEEEECCCCCEEEEEcCCCeEEEEECC---CCcEEEEEEecCCceEEEEEE
Confidence            766543222                 268999999999999999999999999999   77888888887665433  23


Q ss_pred             E-ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE--CCCcEEEEEcC
Q psy8152         240 T-TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS--LDRHFRVHDFH  305 (444)
Q Consensus       240 ~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~  305 (444)
                      + .+++.+|++|+.||.|++||+.+ ++.+..+.+|...|.+++|+|++++|++++  .|++|++|+..
T Consensus       244 ~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          244 FSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EECSSSCEEEECCTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             EEeCCCcEEEEECCCCEEEEEECCC-chhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            3 36788999999999999999999 999999999999999999999999999997  69999999864

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-41  Score=308.67  Aligned_cols=272  Identities=11%  Similarity=0.081  Sum_probs=214.8

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-------cccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-------NFNT   79 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-------~~~~   79 (444)
                      .+|++|+.||.|++|++..+..  .....+...+|...|++++|+ |++.+|++|+.|++|+||++...       +.+.
T Consensus        25 ~~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~s-p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~  101 (330)
T 2hes_X           25 GILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWR-PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA  101 (330)
T ss_dssp             TEEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEEC-TTSSEEEEEETTSCEEEEEC-------CCCEEEE
T ss_pred             CEEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEEC-CCCCEEEEEeCCCcEEEEEcccCcCccccceeEE
Confidence            3899999999999999987642  112223222499999999999 79999999999999999998532       2233


Q ss_pred             ceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC----CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152          80 NTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE----PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKL  153 (444)
Q Consensus        80 ~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  153 (444)
                      .+  .+|...|.++  +|++++|++|+.|++|++|++...    +++..+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus       102 ~~--~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~i  179 (330)
T 2hes_X          102 II--EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI  179 (330)
T ss_dssp             EE--C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred             EE--cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence            33  4777777665  688999999999999999999432    344456789999999999999999999999999999


Q ss_pred             EEcCCc--eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCc-------
Q psy8152         154 WDLNTT--KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQR-------  222 (444)
Q Consensus       154 wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~-------  222 (444)
                      |++.++  +++..+.+|..                  .|.+++|+|+  +.+|++++.|++|++|+++   ..       
T Consensus       180 W~~~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~---~~~~~~~~~  238 (330)
T 2hes_X          180 WKDYDDDWECVAVLNGHEG------------------TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM---GDDEDDQQE  238 (330)
T ss_dssp             EEEETTEEEEEEEECCCSS------------------CEEEEEECCSSSSCEEEEEETTSCEEEEEEE---EECTTSCEE
T ss_pred             EECCCCCeeEEEEccCCCC------------------cEEEEEecCCCCeeEEEEEeCCCeEEEEEec---CCCccccce
Confidence            999875  57777877777                  7999999998  6789999999999999997   22       


Q ss_pred             -cceEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc--ceeE-eccccC-ceeEEEecC--CCCEEEEEE
Q psy8152         223 -RPVLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK--PCYK-YKGFAG-CVKDIACPL--NENLILSVS  294 (444)
Q Consensus       223 -~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~-~~~h~~-~i~~~~~s~--~~~~l~s~~  294 (444)
                       .....+.. |...|.+++|++++ +|++++.||.|+||++.. +.  ++.. +.+|.. .|++++|+|  ++++|++|+
T Consensus       239 ~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s  316 (330)
T 2hes_X          239 WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD-GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG  316 (330)
T ss_dssp             EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET-TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred             eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC-CceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence             33344444 88899999999765 889999999999999987 63  3333 357877 899999999  688999999


Q ss_pred             CCCcEEEEEcCC
Q psy8152         295 LDRHFRVHDFHS  306 (444)
Q Consensus       295 ~dg~i~vw~~~~  306 (444)
                      .||+|+||++..
T Consensus       317 ~Dg~v~~W~~~~  328 (330)
T 2hes_X          317 DDGIVNFWSLEK  328 (330)
T ss_dssp             TTSEEEEEEC--
T ss_pred             CCCcEEEEEecc
Confidence            999999999864

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=7.8e-41  Score=317.68  Aligned_cols=302  Identities=12%  Similarity=0.191  Sum_probs=270.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++++|++|+.||.|++|++.+++.    +..+.  +|...|++++|+   +++|++|+.||.|++|++.+++.+..+.  
T Consensus       128 ~g~~l~sg~~dg~i~vwd~~~~~~----~~~~~--~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~--  196 (445)
T 2ovr_B          128 CGNRIVSGSDDNTLKVWSAVTGKC----LRTLV--GHTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLY--  196 (445)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCCE----EEECC--CCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred             cCCEEEEEECCCcEEEEECCCCcE----EEEEc--CCCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEEC--
Confidence            467899999999999999988774    22233  899999999998   5799999999999999999998887765  


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      +|...|.++.+++++|++++.||.|++|++.+++.+..+..|...|.+++|  ++.+|++|+.||.|++||+++++++..
T Consensus       197 ~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~  274 (445)
T 2ovr_B          197 GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT  274 (445)
T ss_dssp             CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEE
T ss_pred             CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEE
Confidence            788999999999999999999999999999999988888889999999999  788999999999999999999999988


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      +..|..                  .|.+++|  ++.+|++++.|+.|++||++   ...++..+.+|...+.++.++  +
T Consensus       275 ~~~~~~------------------~v~~~~~--~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~--~  329 (445)
T 2ovr_B          275 LQGHTN------------------RVYSLQF--DGIHVVSGSLDTSIRVWDVE---TGNCIHTLTGHQSLTSGMELK--D  329 (445)
T ss_dssp             ECCCSS------------------CEEEEEE--CSSEEEEEETTSCEEEEETT---TCCEEEEECCCCSCEEEEEEE--T
T ss_pred             ecCCCC------------------ceEEEEE--CCCEEEEEeCCCeEEEEECC---CCCEEEEEcCCcccEEEEEEe--C
Confidence            887776                  7999999  77999999999999999999   788888899999989888774  6


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEecc---ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe------ec
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKG---FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD------YM  315 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~------~~  315 (444)
                      ++|++|+.||.|++||+++ ++++..+.+   |...|++++|+  +++|++++.||.|++|++.+++.+..+      .+
T Consensus       330 ~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  406 (445)
T 2ovr_B          330 NILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS  406 (445)
T ss_dssp             TEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGG
T ss_pred             CEEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCC
Confidence            7999999999999999999 999999986   88899999996  579999999999999999999998887      36


Q ss_pred             CCceeEEEEcCCCcccccchhhhhccccccCCC----ccccCCCc
Q psy8152         316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDS----DEKYDPEH  356 (444)
Q Consensus       316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~----i~~W~~~~  356 (444)
                      ...|++++|+++         +.++++++.||+    +.+|++..
T Consensus       407 ~~~v~~~~~s~~---------~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          407 GGVVWRIRASNT---------KLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             TCEEEEEEECSS---------EEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CceEEEEEecCC---------EEEEEEcccCCCCccEEEEEECCC
Confidence            678999998844         678999999998    99999874

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=7e-41  Score=306.27  Aligned_cols=286  Identities=16%  Similarity=0.203  Sum_probs=241.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc---ceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT---NTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~---~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      +|.+.|++|+|+|..+++|+||+.|++|+||++.+.+...   ...+.+|...|.++  +|++++|++++.|+.|++|+.
T Consensus        36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~  115 (340)
T 4aow_A           36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL  115 (340)
T ss_dssp             CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence            8999999999994346899999999999999997655322   22234677777665  688999999999999999999


Q ss_pred             CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee-eeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      ...........+...+..+.+++.+.+|++++.|+.+++||+...... .....+..                  .+..+
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~------------------~v~~~  177 (340)
T 4aow_A          116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE------------------WVSCV  177 (340)
T ss_dssp             TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS------------------CEEEE
T ss_pred             cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC------------------cccce
Confidence            988877767778889999999999999999999999999999875433 33344444                  68999


Q ss_pred             EEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         194 SFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       194 ~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      +|++++  .++++++.|+.|++||++   ....+..+.+|...|++++|+|++++|++|+.||.|++||+++ .+++..+
T Consensus       178 ~~~~~~~~~~~~s~~~d~~i~i~d~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~  253 (340)
T 4aow_A          178 RFSPNSSNPIIVSCGWDKLVKVWNLA---NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTL  253 (340)
T ss_dssp             EECSCSSSCEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEE
T ss_pred             EEccCCCCcEEEEEcCCCEEEEEECC---CCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-Cceeeee
Confidence            998875  678899999999999999   7888889999999999999999999999999999999999999 8998888


Q ss_pred             ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----------cCCceeEEEEcCCCcccccchhhhhcc
Q psy8152         272 KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----------MQSRLTSILVRSDFSLENETKKEEQEH  341 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~~~~~  341 (444)
                      .. ...|++++|+|++. +++++.|+.|++|++.++.++..+.          |...|++++|+++         +++++
T Consensus       254 ~~-~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d---------g~~l~  322 (340)
T 4aow_A          254 DG-GDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD---------GQTLF  322 (340)
T ss_dssp             EC-SSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT---------SSEEE
T ss_pred             cC-CceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC---------CCEEE
Confidence            75 46899999999876 4566679999999999887765542          6678999998744         67899


Q ss_pred             ccccCCCccccCCCccc
Q psy8152         342 SEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       342 s~~~d~~i~~W~~~~~~  358 (444)
                      +++.||.|+||++.++.
T Consensus       323 sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          323 AGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EEETTSCEEEEEEEC--
T ss_pred             EEeCCCEEEEEeCCCcC
Confidence            99999999999988654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=5.9e-41  Score=312.90  Aligned_cols=285  Identities=14%  Similarity=0.188  Sum_probs=231.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeec-------------ccCcccceEEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK-------------YITNKASVLALNWGNVEESELLIAYSGQKIKIY   70 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw   70 (444)
                      +++.+|++|+ ++.+++|++.+++.. ..+....             ...+...|++++|+ |++++|++|+.|+.|+||
T Consensus        74 pdg~~la~g~-~~~v~i~~~~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s-~dg~~l~s~~~d~~i~iw  150 (393)
T 1erj_A           74 NDGEYLATGC-NKTTQVYRVSDGSLV-ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS-PDGKFLATGAEDRLIRIW  150 (393)
T ss_dssp             TTSSEEEEEC-BSCEEEEETTTCCEE-EEECC-----------------CCCCBEEEEEEC-TTSSEEEEEETTSCEEEE
T ss_pred             CCCCEEEEEc-CCcEEEEEecCCCEE-EEecCccccccccccccccccCCCceeEEEEEEC-CCCCEEEEEcCCCeEEEE
Confidence            4567788876 689999999887741 1111000             00233459999999 799999999999999999


Q ss_pred             eCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeC
Q psy8152          71 DTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGK  147 (444)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  147 (444)
                      |+.+++.+..+.  +|...|.++  +|++++|++++.|++|++||+.++++.. ...+...+.+++|+| ++++|++|+.
T Consensus       151 d~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~s~  227 (393)
T 1erj_A          151 DIENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL-TLSIEDGVTTVAVSPGDGKYIAAGSL  227 (393)
T ss_dssp             ETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECSTTCCEEEEEET
T ss_pred             ECCCCcEEEEEc--cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE-EEEcCCCcEEEEEECCCCCEEEEEcC
Confidence            999988877765  677777665  6789999999999999999999988774 455777899999999 8999999999


Q ss_pred             CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC-------
Q psy8152         148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT-------  220 (444)
Q Consensus       148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------  220 (444)
                      |+.|++||+++++.+..+.....           ....+...|++++|+|++++|++++.|++|++||++...       
T Consensus       228 d~~v~iwd~~~~~~~~~~~~~~~-----------~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~  296 (393)
T 1erj_A          228 DRAVRVWDSETGFLVERLDSENE-----------SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT  296 (393)
T ss_dssp             TSCEEEEETTTCCEEEEEC-----------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred             CCcEEEEECCCCcEEEeeccccc-----------CCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence            99999999999887766531110           001123379999999999999999999999999997210       


Q ss_pred             --CccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecC------CCCEEEE
Q psy8152         221 --QRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL------NENLILS  292 (444)
Q Consensus       221 --~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~------~~~~l~s  292 (444)
                        ...+...+.+|...|.+++|+|++.+|++|+.|+.|++||+.+ ++++..+.+|...|.+++|++      ++++|++
T Consensus       297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~-~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~s  375 (393)
T 1erj_A          297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT  375 (393)
T ss_dssp             ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred             CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC-CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEE
Confidence              1234567789999999999999999999999999999999999 999999999999999999876      6789999


Q ss_pred             EECCCcEEEEEcCC
Q psy8152         293 VSLDRHFRVHDFHS  306 (444)
Q Consensus       293 ~~~dg~i~vw~~~~  306 (444)
                      |+.||+|+||++..
T Consensus       376 gs~Dg~i~iW~~~~  389 (393)
T 1erj_A          376 GSGDCKARIWKYKK  389 (393)
T ss_dssp             EETTSEEEEEEEEE
T ss_pred             ECCCCcEEECcccc
Confidence            99999999999864

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=3e-41  Score=315.58  Aligned_cols=297  Identities=10%  Similarity=0.093  Sum_probs=246.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc------cccceeeccccccEEEE--EeC----C---CeEEEEe
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN------FNTNTDVSFGEGDIVGV--SRY----D---ECILTAV  104 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~------~~~~~~~~~~~~~v~~~--s~~----~---~~l~~~~  104 (444)
                      +|...|++++|+ |  ++|++|+.||.|++|++.+++      ....+  ..|...|.++  +|+    +   ++|++++
T Consensus        14 ~h~~~i~~~~~~-~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~   88 (397)
T 1sq9_A           14 AHDADIFSVSAC-N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH--FVHKSGLHHVDVLQAIERDAFELCLVATTS   88 (397)
T ss_dssp             CSSSCEEEEEEC-S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE--ECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             hhhcCeEEEEec-C--CeEEEEcCCCEEEEEECCCcccccCCCcceEE--ecCCCcEEEEEEecccccCCccccEEEEEc
Confidence            899999999999 5  899999999999999999887      44444  4677777665  677    8   8999999


Q ss_pred             cCCcEEEEEcCCCCc-----ccccccc-----CCCeEEEEEe----ccCCE-EEEeeCCCeEEEEEcCC------ceeee
Q psy8152         105 KSGDVKLWRYKTEPD-----QWTNFNV-----GPQLECMKHN----KHSNI-IATGGKENDLKLWDLNT------TKNIF  163 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~vwd~~~------~~~~~  163 (444)
                      .++.|++|++.+++.     ...+..|     ...|.+++|+    |++.+ |++++.||.|++||+.+      ++.+.
T Consensus        89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  168 (397)
T 1sq9_A           89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN  168 (397)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred             CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence            999999999998886     6566777     4899999999    99999 99999999999999998      66554


Q ss_pred             -----eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC---C---C
Q psy8152         164 -----SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI---P---D  232 (444)
Q Consensus       164 -----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~---~  232 (444)
                           .+....           .....+...|++++|+|++ +|++++.|+.|++||++   ...++..+..   |   .
T Consensus       169 ~~~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~h~~~~  233 (397)
T 1sq9_A          169 WSPTLELQGTV-----------ESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS---TLRPLYNFESQHSMINNS  233 (397)
T ss_dssp             CCCEEEEEEEE-----------CCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT---TTEEEEEEECCC---CCC
T ss_pred             ccCcceeeeee-----------ccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC---CCceeEEEeccccccccC
Confidence                 443200           0000112379999999999 99999999999999999   7888888888   8   9


Q ss_pred             CCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEecc-------------ccCceeEEEecCCCCEEEEEECC
Q psy8152         233 VALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKG-------------FAGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-------------h~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                      ..|.+++|+|++++|++++.+   |.|++||+++ ++++..+.+             |...|++++|+|++++|++++.|
T Consensus       234 ~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  312 (397)
T 1sq9_A          234 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD  312 (397)
T ss_dssp             CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred             CccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            999999999999999999999   9999999999 999999998             99999999999999999999999


Q ss_pred             CcEEEEEcCCCceEEEee-------c---------------CCceeEEEEcCCCccccc-chhhhhccccccCCCccccC
Q psy8152         297 RHFRVHDFHSKKLLRKDY-------M---------------QSRLTSILVRSDFSLENE-TKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       297 g~i~vw~~~~~~~~~~~~-------~---------------~~~i~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~i~~W~  353 (444)
                      |.|++|++.+++++..+.       |               ...|.+++|+++-...+. ..++.++++++.|+.|++|+
T Consensus       313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~  392 (397)
T 1sq9_A          313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  392 (397)
T ss_dssp             SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence            999999999999988876       4               788999999866200000 01125899999999999999


Q ss_pred             CCcc
Q psy8152         354 PEHF  357 (444)
Q Consensus       354 ~~~~  357 (444)
                      +..+
T Consensus       393 ~~~g  396 (397)
T 1sq9_A          393 EAGG  396 (397)
T ss_dssp             EEC-
T ss_pred             cCCC
Confidence            8754

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1e-40  Score=314.49  Aligned_cols=333  Identities=12%  Similarity=0.110  Sum_probs=265.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.+|.|++|++.+.+..    ..+.  .| ..+....|+ +++++|++|+.|+.|++|++.+++....+. 
T Consensus        66 ~~g~~l~~~~~d~~v~i~d~~~~~~~----~~~~--~~-~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-  136 (420)
T 3vl1_A           66 KVGSHLYKARLDGHDFLFNTIIRDGS----KMLK--RA-DYTAVDTAK-LQMRRFILGTTEGDIKVLDSNFNLQREIDQ-  136 (420)
T ss_dssp             EEETTEEEEEETTEEEEEECCSEETT----TTSC--SC-CEEEEEEEC-SSSCEEEEEETTSCEEEECTTSCEEEEETT-
T ss_pred             ecCCeEEEEEcCCcEEEEEeccccee----eEEe--cC-CceEEEEEe-cCCCEEEEEECCCCEEEEeCCCcceeeecc-
Confidence            35678999999999999998876631    1111  33 444445677 799999999999999999999888776654 


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       +|...|.++  +|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus       137 -~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  215 (420)
T 3vl1_A          137 -AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT  215 (420)
T ss_dssp             -SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred             -cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence             667777665  67899999999999999999999998887888999999999999999999999999999999999998


Q ss_pred             eeeeec---ccceeeEeeeCCCcc---cccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCC
Q psy8152         162 IFSAKN---VSHRVLVYSVKPDEF---DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVA  234 (444)
Q Consensus       162 ~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~  234 (444)
                      +..+..   +...+..+.+.|...   .......+.+++|+|++++|++++.||.|++||++   ....+..+. .|...
T Consensus       216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~  292 (420)
T 3vl1_A          216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF---SKEQTIQLPSKFTCS  292 (420)
T ss_dssp             EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT---TCCEEEEECCTTSSC
T ss_pred             eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC---CCceeEEcccccCCC
Confidence            888875   334445555543321   12223467888899999999999999999999999   566665554 47889


Q ss_pred             eeEEEEccCCC-EEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC-----
Q psy8152         235 LSCITTTNQSH-YVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK-----  307 (444)
Q Consensus       235 i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~-----  307 (444)
                      |.+++|+|++. +|++|+.||.|++||+++...++..+.+ |...|+++.| +++++|++++.|+.|++|++...     
T Consensus       293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~  371 (420)
T 3vl1_A          293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERP  371 (420)
T ss_dssp             EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSC
T ss_pred             ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCcc
Confidence            99999999998 9999999999999999982345778876 6778888866 57889999999999999998873     


Q ss_pred             -----ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         308 -----KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       308 -----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                           .......+...|.+++|+++..     .++ .+++.+.+|.+.+|++..
T Consensus       372 ~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~~g-~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          372 AIEFETPTFLVSNDDAVSQFCYVSDDE-----SNG-EVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             EECTTSCEEECCSSCCCCEEEEECCSS-----SSC-EEEEEETTTEEEEEESCC
T ss_pred             ceeccCccEEccCCcceEEEEEccCCC-----Ccc-eEEEEcCCceEEEEeccC
Confidence                 1222234778899999997743     111 456667789999998764

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.6e-40  Score=309.62  Aligned_cols=278  Identities=12%  Similarity=0.158  Sum_probs=237.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +..+++++.+|.|++|++.+++.     .......|...|++++|+ |++.+|++|+.||.|++|++.+++.+..+.  +
T Consensus       103 ~~~l~~~~~d~~v~lw~~~~~~~-----~~~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~  174 (401)
T 4aez_A          103 NLNVVAVALERNVYVWNADSGSV-----SALAETDESTYVASVKWS-HDGSFLSVGLGNGLVDIYDVESQTKLRTMA--G  174 (401)
T ss_dssp             TTSEEEEEETTEEEEEETTTCCE-----EEEEECCTTCCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEEC--C
T ss_pred             CCCEEEEECCCeEEEeeCCCCcE-----eEeeecCCCCCEEEEEEC-CCCCEEEEECCCCeEEEEECcCCeEEEEec--C
Confidence            46688999999999999998874     122222589999999999 799999999999999999999998887775  7


Q ss_pred             ccccEEEEEeCCCeEEEEecCCcEEEEEcC-CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          86 GEGDIVGVSRYDECILTAVKSGDVKLWRYK-TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      |...|.++++++.+|++++.+|.|++|++. ....+..+..|...|.+++|+|++++|++|+.|+.|++||+++++++..
T Consensus       175 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  254 (401)
T 4aez_A          175 HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT  254 (401)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred             CCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence            899999999999999999999999999998 4555556778999999999999999999999999999999999998888


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEe--CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCS--KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+..                  .|.+++|+|++ .++++++  .|+.|++||++   ...++..+. +...|.+++|+
T Consensus       255 ~~~~~~------------------~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~---~~~~~~~~~-~~~~v~~~~~s  312 (401)
T 4aez_A          255 KTNHNA------------------AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA---TGARVNTVD-AGSQVTSLIWS  312 (401)
T ss_dssp             ECCCSS------------------CCCEEEECTTSTTEEEEECCTTTCEEEEEETT---TCCEEEEEE-CSSCEEEEEEC
T ss_pred             ecCCcc------------------eEEEEEECCCCCCEEEEecCCCCCEEEEEECC---CCCEEEEEe-CCCcEEEEEEC
Confidence            877776                  79999999977 6666665  79999999999   677777776 56679999999


Q ss_pred             cCCCEEEE--EcCCCcEEEEEcCCCCcceeE--eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         242 NQSHYVIV--GSTTGDMMAVDLRGKGKPCYK--YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       242 ~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~--~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      |++++|++  |+.+|.|++|++.+ +.....  +.+|...|++++|+|++++|++++.||.|++|++.+++.+....
T Consensus       313 ~~~~~l~~~~g~~dg~i~v~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~  388 (401)
T 4aez_A          313 PHSKEIMSTHGFPDNNLSIWSYSS-SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI  388 (401)
T ss_dssp             SSSSEEEEEECTTTCEEEEEEEET-TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred             CCCCeEEEEeecCCCcEEEEecCC-ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence            99999999  55899999999998 665544  56899999999999999999999999999999999988776543

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.4e-40  Score=304.21  Aligned_cols=297  Identities=10%  Similarity=0.075  Sum_probs=254.2

Q ss_pred             cCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCC
Q psy8152          39 ITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        39 ~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      .+|...|++++|+ |++++|++|+.||.|++|++.+++.+..+.  +|...|.++  +|++++|++++.||.|++|++.+
T Consensus        29 ~~h~~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~  105 (369)
T 3zwl_B           29 TGHERPLTQVKYN-KEGDLLFSCSKDSSASVWYSLNGERLGTLD--GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN  105 (369)
T ss_dssp             ECCSSCEEEEEEC-TTSCEEEEEESSSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred             EEeeceEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCchhhhhhh--hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            3899999999999 799999999999999999999998888775  667777665  67899999999999999999999


Q ss_pred             CCccccccccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcCCceeeeeeecccc-eeeEeeeCCCcccccCccce
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLNTTKNIFSAKNVSH-RVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i  190 (444)
                      ++.+. ...+...|.+++|+|++++|++++.+     +.|++|++........+..... .+..+....      ....+
T Consensus       106 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  178 (369)
T 3zwl_B          106 GQCVA-TWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE------GLDAA  178 (369)
T ss_dssp             CCEEE-EEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT------TCCCE
T ss_pred             CcEEE-EeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc------Cccce
Confidence            98886 44489999999999999999999998     9999999987543322221111 011111000      01269


Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCCCCC-ccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQ-RRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      .+++|+|++++|++++.+|.|++||++   . ...+..+..|...|.+++|+|++++|++++.|+.|++||+++ ++.+.
T Consensus       179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~  254 (369)
T 3zwl_B          179 TVAGWSTKGKYIIAGHKDGKISKYDVS---NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLK  254 (369)
T ss_dssp             EEEEECGGGCEEEEEETTSEEEEEETT---TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEE
T ss_pred             eEEEEcCCCCEEEEEcCCCEEEEEECC---CCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceee
Confidence            999999999999999999999999999   5 678888899999999999999999999999999999999999 89888


Q ss_pred             EeccccCceeEEEecCCCCEEEEEECCC--------------cEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccc
Q psy8152         270 KYKGFAGCVKDIACPLNENLILSVSLDR--------------HFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENET  334 (444)
Q Consensus       270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg--------------~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~  334 (444)
                      .+. +...+.+++|+|+++++++++.++              .|++|++.+++++..+. |...|.+++|+++       
T Consensus       255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~-------  326 (369)
T 3zwl_B          255 KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ-------  326 (369)
T ss_dssp             EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT-------
T ss_pred             eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC-------
Confidence            887 778999999999999999999988              89999999999988876 8899999999854       


Q ss_pred             hhhhhccccccCCCccccCCCcccc
Q psy8152         335 KKEEQEHSEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       335 ~~~~~~~s~~~d~~i~~W~~~~~~~  359 (444)
                        +.++++++.|+.|++|++..+..
T Consensus       327 --~~~l~s~~~dg~v~iw~~~~~~~  349 (369)
T 3zwl_B          327 --GTSYASGGEDGFIRLHHFEKSYF  349 (369)
T ss_dssp             --SSEEEEEETTSEEEEEEECHHHH
T ss_pred             --CCEEEEEcCCCeEEEEECccccc
Confidence              57899999999999999986554

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6.4e-40  Score=299.91  Aligned_cols=279  Identities=13%  Similarity=0.128  Sum_probs=233.2

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccce-eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCII-KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +..+++|++|+.||+|+||++...+... .....+.  +|...|++++|+ |++.+|++|+.|+.|++|+..........
T Consensus        48 p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~--~h~~~V~~~~~s-~dg~~l~s~~~d~~i~~~~~~~~~~~~~~  124 (340)
T 4aow_A           48 PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR--GHSHFVSDVVIS-SDGQFALSGSWDGTLRLWDLTTGTTTRRF  124 (340)
T ss_dssp             TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe--CCCCCEEEEEEC-CCCCEEEEEcccccceEEeecccceeeee
Confidence            4456789999999999999998765311 1122222  899999999999 79999999999999999999888777766


Q ss_pred             eeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCC
Q psy8152          82 DVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNT  158 (444)
Q Consensus        82 ~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~  158 (444)
                      ...........+++.+.+|++++.|+.+++|++....... ....|...+.+++|+++  ..++++++.|+.|++||+++
T Consensus       125 ~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~  204 (340)
T 4aow_A          125 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN  204 (340)
T ss_dssp             ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred             cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC
Confidence            5444444455567889999999999999999987654432 45568999999999884  46788999999999999999


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      ++.+..+.+|..                  .|++++|+|++++|++|+.|+.|++||++   ...++..+..+ ..|.++
T Consensus       205 ~~~~~~~~~h~~------------------~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~---~~~~~~~~~~~-~~v~~~  262 (340)
T 4aow_A          205 CKLKTNHIGHTG------------------YLNTVTVSPDGSLCASGGKDGQAMLWDLN---EGKHLYTLDGG-DIINAL  262 (340)
T ss_dssp             TEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTCEEEEEETT---TTEEEEEEECS-SCEEEE
T ss_pred             CceeeEecCCCC------------------cEEEEEECCCCCEEEEEeCCCeEEEEEec---cCceeeeecCC-ceEEee
Confidence            999998888877                  79999999999999999999999999999   77788777754 579999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec---------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK---------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      +|+|++.++ +++.|+.|++||++. +..+..+.         +|...|++++|+|++++|++|+.||.|+||++.+|.
T Consensus       263 ~~~~~~~~~-~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          263 CFSPNRYWL-CAATGPSIKIWDLEG-KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EECSSSSEE-EEEETTEEEEEETTT-TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             ecCCCCcee-eccCCCEEEEEECCC-CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            999987654 566799999999998 76665553         688899999999999999999999999999998875

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.1e-40  Score=333.82  Aligned_cols=286  Identities=13%  Similarity=0.168  Sum_probs=237.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc---cceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN---TNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~---~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      +|.+.|++|+|+|.++++|++|+.|++|++|++.+....   ....+.+|...|.++  +|++++|++|+.|++|+|||+
T Consensus       380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~  459 (694)
T 3dm0_A          380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL  459 (694)
T ss_dssp             CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            899999999999545689999999999999999764322   112334777777655  789999999999999999999


Q ss_pred             CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      .+++....+.+|...|.+++|+|++++|++|+.|++|++||+.............               .+..+|.+++
T Consensus       460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~---------------~h~~~v~~~~  524 (694)
T 3dm0_A          460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE---------------GHRDWVSCVR  524 (694)
T ss_dssp             TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTT---------------SCSSCEEEEE
T ss_pred             CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCC---------------CCCCcEEEEE
Confidence            9998888888999999999999999999999999999999987543332221111               1233799999


Q ss_pred             EecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         195 FLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       195 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      |+|++  ..|++++.|++|++||++   .......+.+|...|++++|+|++++|++|+.||.|+|||+++ ++++..+.
T Consensus       525 ~~~~~~~~~l~s~s~d~~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~-~~~~~~~~  600 (694)
T 3dm0_A          525 FSPNTLQPTIVSASWDKTVKVWNLS---NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE-GKKLYSLE  600 (694)
T ss_dssp             ECSCSSSCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT-TEEEECCB
T ss_pred             EeCCCCcceEEEEeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CceEEEec
Confidence            99987  689999999999999999   7778888999999999999999999999999999999999999 88888887


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------------CceeEEEEcCCCcccc
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------------SRLTSILVRSDFSLEN  332 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------------~~i~~~~~~~~~~~~~  332 (444)
                      . ...|++++|+|++.+|++++ ++.|+|||+.+++++..+...                    ..+++++|+       
T Consensus       601 ~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s-------  671 (694)
T 3dm0_A          601 A-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWS-------  671 (694)
T ss_dssp             C-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEEC-------
T ss_pred             C-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEc-------
Confidence            4 56899999999998887765 566999999999887765411                    124566665       


Q ss_pred             cchhhhhccccccCCCccccCCC
Q psy8152         333 ETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       333 ~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                        |++.+|++++.||.|++|++.
T Consensus       672 --pdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          672 --ADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             --TTSSEEEEEETTSEEEEEEC-
T ss_pred             --CCCCEEEEEcCCCeEEEEecc
Confidence              557899999999999999975

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=2.6e-40  Score=352.29  Aligned_cols=336  Identities=13%  Similarity=0.133  Sum_probs=283.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.+|.|++|++.+++.    +..+.  +|...|++++|+ |++++|++|+.|+.|+|||+.+++.+..+. 
T Consensus       625 ~~~~~l~s~~~d~~i~vw~~~~~~~----~~~~~--~h~~~v~~~~~s-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-  696 (1249)
T 3sfz_A          625 QDGQRIASCGADKTLQVFKAETGEK----LLDIK--AHEDEVLCCAFS-SDDSYIATCSADKKVKIWDSATGKLVHTYD-  696 (1249)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCCE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCE----EEEec--cCCCCEEEEEEe-cCCCEEEEEeCCCeEEEEECCCCceEEEEc-
Confidence            4678999999999999999988874    22333  899999999999 799999999999999999999999888876 


Q ss_pred             ccccccEEEE--Ee--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152          84 SFGEGDIVGV--SR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        84 ~~~~~~v~~~--s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                       +|...|.++  +|  ++.++++++.|+.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.++
T Consensus       697 -~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~  775 (1249)
T 3sfz_A          697 -EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA  775 (1249)
T ss_dssp             -CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred             -CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence             667777665  55  4558999999999999999999988888899999999999999999999999999999999988


Q ss_pred             eeeeeeeccc-------------ceeeEeeeCCCcc------------------------cccCccceeEEEEecCCCEE
Q psy8152         160 KNIFSAKNVS-------------HRVLVYSVKPDEF------------------------DLRRPVWVNGISFLPNSDKV  202 (444)
Q Consensus       160 ~~~~~~~~~~-------------~~~~~~~~~~~~~------------------------~~~~~~~i~~~~~~~~~~~l  202 (444)
                      +....+....             ..+..++++|++.                        ...+...|.+++|+|++.++
T Consensus       776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l  855 (1249)
T 3sfz_A          776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA  855 (1249)
T ss_dssp             EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEE
T ss_pred             cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEE
Confidence            7665543211             1233444555431                        12455679999999999999


Q ss_pred             EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC--------------------
Q psy8152         203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR--------------------  262 (444)
Q Consensus       203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~--------------------  262 (444)
                      ++++.++.|++|++.   ....+..+.+|...|++++|+|++++|++++.||.|++|++.                    
T Consensus       856 ~~~~~dg~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~  932 (1249)
T 3sfz_A          856 VIALSQYCVELWNID---SRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE  932 (1249)
T ss_dssp             EEECSSSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred             EEEeCCCeEEEEEcC---CCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence            999999999999999   788888889999999999999999999999888888888743                    


Q ss_pred             -----------------------------------------------------------CCCcceeEeccccCceeEEEe
Q psy8152         263 -----------------------------------------------------------GKGKPCYKYKGFAGCVKDIAC  283 (444)
Q Consensus       263 -----------------------------------------------------------~~~~~~~~~~~h~~~i~~~~~  283 (444)
                                                                                 + ++.+..+.+|...|++++|
T Consensus       933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~-~~~~~~~~~h~~~v~~l~~ 1011 (1249)
T 3sfz_A          933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN-NRVFSSGVGHKKAVRHIQF 1011 (1249)
T ss_dssp             TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT-TSCEEECCCCSSCCCCEEE
T ss_pred             CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC-CceeeecccCCCceEEEEE
Confidence                                                                       2 3445556689999999999


Q ss_pred             cCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccccc
Q psy8152         284 PLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQV  362 (444)
Q Consensus       284 s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~  362 (444)
                      +|++++|++++.||.|++|++.+++.+....|...+.+++|.++          ..+++++.|+.+++|++..++....
T Consensus      1012 s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~----------~~l~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A         1012 TADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQD----------SRLLSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp             CSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSS----------SEEEEEESSSEEEEEETTTTCCCEE
T ss_pred             CCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCC----------CcEEEEECCCcEEEEECCCCceeEE
Confidence            99999999999999999999999998877779999999999865          4578899999999999987765543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-41  Score=324.54  Aligned_cols=318  Identities=8%  Similarity=0.013  Sum_probs=232.5

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-----CCcEEEEEEcCCeEEEEeCCCCccc---
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-----EESELLIAYSGQKIKIYDTDFKNFN---   78 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~d~~i~vw~~~~~~~~---   78 (444)
                      ..|++++.|++|+||++.+++........+.  .|.+.|++|+|+|.     ++.+||+|+.||+|+||++.++...   
T Consensus       174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~--~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~  251 (524)
T 2j04_B          174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV--HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV  251 (524)
T ss_dssp             --------CEEEEEEEEETTTCCEEEEEEEE--ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred             hhhccCCCCceEEEEEccCCCCCceEEEEEE--ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence            4566678899999999987763211111122  57889999999942     2579999999999999999876432   


Q ss_pred             ------cceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEE--EEeccC-CEEEEeeC
Q psy8152          79 ------TNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECM--KHNKHS-NIIATGGK  147 (444)
Q Consensus        79 ------~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~  147 (444)
                            ....+.+|...|.++++ .+..|++|+.||+|++||+.++.. ...+..|...|+++  +|+|++ .+||+|+.
T Consensus       252 ~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~  331 (524)
T 2j04_B          252 FKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV  331 (524)
T ss_dssp             EECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred             ceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence                  11234577888888864 346899999999999999987643 33467899999999  567787 89999999


Q ss_pred             CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152         148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  227 (444)
                      |++|+|||+++++++..+.++..                ...|.+++|+|+++.|++++.|++|++||++   ...++.+
T Consensus       332 D~tvklWD~~~~~~~~~~~~~~~----------------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~---~~~~~~~  392 (524)
T 2j04_B          332 DGYFYIFNPKDIATTKTTVSRFR----------------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSR---AAFAVHP  392 (524)
T ss_dssp             TSEEEEECGGGHHHHCEEEEECS----------------CCSCCCEEEETTTTEEEEECSSSEEEEEETT---CTTCCEE
T ss_pred             CCeEEEEECCCCCcccccccccc----------------cCcccceEeCCCcCeEEEeCCCCcEEEEECc---cccccee
Confidence            99999999999877666655432                1137899999999999999999999999999   6777778


Q ss_pred             EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-----ccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         228 VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-----FAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       228 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      +.+|...|++|+|+|++++|++|+.||+|++|++.. . .+..+..     +...|.+++|+|++..+. ...  .+++|
T Consensus       393 l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~-~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~  467 (524)
T 2j04_B          393 LVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR-R-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVY  467 (524)
T ss_dssp             EEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS-S-TTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCC
T ss_pred             eecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH-h-hccccccCccceeeeEEEEeccCCCCCeEE-ccC--Cceec
Confidence            889999999999999999999999999999999875 3 4433321     122577999999998552 222  33344


Q ss_pred             EcC-CCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         303 DFH-SKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       303 ~~~-~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      ... ++.++..+. |..+|++++|+++.      +.+..+++++.+|.||||++..
T Consensus       468 ~~~~~g~~~~~l~gh~~~V~~Vafsp~~------~~~~~lAsg~~~g~vrlw~l~~  517 (524)
T 2j04_B          468 PLTVNDVSKAKIDAHGINITCTKWNETS------AGGKCYAFSNSAGLLTLEYLSL  517 (524)
T ss_dssp             C-------------CCCSCCCEEECCST------TTTTEEEEECTTSEEEEEECSC
T ss_pred             ccccCCcceeeecCCCceEEEEECCCCC------CccHHHHhhccCceEEEEEccc
Confidence            433 355555554 88999999999772      1245899999999999999764

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=2.2e-40  Score=308.32  Aligned_cols=282  Identities=14%  Similarity=0.113  Sum_probs=235.1

Q ss_pred             CcccceEEEeeeccCC-cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEE-SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|...|++++|+ |++ .+|++|+.||.|+||++.+++....+...+|...|.++  +| ++++|++++.|+.|++|++.
T Consensus        71 ~h~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~  149 (383)
T 3ei3_B           71 PFDRRVTSLEWH-PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS  149 (383)
T ss_dssp             CCSSCEEEEEEC-SSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred             CCCCCEEEEEEC-CCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence            899999999999 677 89999999999999999988888877666788888776  56 56899999999999999998


Q ss_pred             CCCccccccc---cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         116 TEPDQWTNFN---VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       116 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                      +.. +..+..   |...|.+++|+|++++|++|+.|+.|++||+ .++++..+..|..                  .|.+
T Consensus       150 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~------------------~v~~  209 (383)
T 3ei3_B          150 GSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA------------------KVTH  209 (383)
T ss_dssp             SCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS------------------CEEE
T ss_pred             CCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC------------------cEEE
Confidence            643 333433   4478999999999999999999999999999 5777888887777                  7999


Q ss_pred             EEEecCCC-EEEEEeCCceEEEEEcCCCCC-ccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         193 ISFLPNSD-KVAVCSKQGYVRVYDPKITTQ-RRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       193 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      ++|+|+++ +|++++.|+.|++||++.... ...+..+ .|...|.+++|+| ++++|++++.|+.|++||+++ ++.+.
T Consensus       210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~-~~~~~  287 (383)
T 3ei3_B          210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD-WSKPD  287 (383)
T ss_dssp             EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB-TTSCS
T ss_pred             EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC-Ccccc
Confidence            99999998 999999999999999992111 3444444 6899999999999 999999999999999999998 88777


Q ss_pred             Eecccc-----------------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---cCCceeEEEEcCCCc
Q psy8152         270 KYKGFA-----------------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---MQSRLTSILVRSDFS  329 (444)
Q Consensus       270 ~~~~h~-----------------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---~~~~i~~~~~~~~~~  329 (444)
                      .+.+|.                 ..+..++|+|++++  +++.|+.|++||+.+++++..+.   +...+..++|+++  
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~--  363 (383)
T 3ei3_B          288 QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT--  363 (383)
T ss_dssp             EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT--
T ss_pred             ccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC--
Confidence            776543                 23344666666665  67789999999999999988876   4566777788854  


Q ss_pred             ccccchhhhhccccccCCCccccCCCc
Q psy8152         330 LENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       330 ~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                             +.++++++ |+.|++|++..
T Consensus       364 -------g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          364 -------GDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             -------SSEEEEEE-TTEEEEEECC-
T ss_pred             -------ccEEEEec-CCcEEEEecCC
Confidence                   57888886 89999999864

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.3e-39  Score=310.99  Aligned_cols=300  Identities=12%  Similarity=0.221  Sum_probs=255.4

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++++|++|+.||.|++|++.+++.    +..+.  +|...|++++|+ +++ +|++|+.||+|++|++.+++.+..+.  
T Consensus       131 ~~~~l~sgs~dg~i~vwd~~~~~~----~~~~~--~h~~~V~~l~~~-~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~--  200 (464)
T 3v7d_B          131 EDNYVITGADDKMIRVYDSINKKF----LLQLS--GHDGGVWALKYA-HGG-ILVSGSTDRTVRVWDIKKGCCTHVFE--  200 (464)
T ss_dssp             ETTEEEEEETTSCEEEEETTTTEE----EEEEC--CCSSCEEEEEEC-STT-EEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcE----EEEEe--CCCcCEEEEEEc-CCC-EEEEEeCCCCEEEEECCCCcEEEEEC--
Confidence            457899999999999999988874    22233  899999999999 555 99999999999999999998887775  


Q ss_pred             cccccEEEE--E--eCCCeEEEEecCCcEEEEEcCCCCcc-----------------------ccccccCCCeEEEEEec
Q psy8152          85 FGEGDIVGV--S--RYDECILTAVKSGDVKLWRYKTEPDQ-----------------------WTNFNVGPQLECMKHNK  137 (444)
Q Consensus        85 ~~~~~v~~~--s--~~~~~l~~~~~dg~i~iw~~~~~~~~-----------------------~~~~~~~~~v~~~~~~~  137 (444)
                      +|...|.++  +  +++.+|++++.|+.|++|++.++...                       ....+|...|.++  ++
T Consensus       201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~  278 (464)
T 3v7d_B          201 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG  278 (464)
T ss_dssp             CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred             CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence            667777665  4  46689999999999999999876532                       2355677778777  56


Q ss_pred             cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      ++++|++|+.|+.|++||+++++++..+.+|..                  .|++++|+|++++|++|+.|+.|++||++
T Consensus       279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~sg~~dg~i~vwd~~  340 (464)
T 3v7d_B          279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD------------------RIYSTIYDHERKRCISASMDTTIRIWDLE  340 (464)
T ss_dssp             ETTEEEEEETTSCEEEEETTTTEEEEEECCCSS------------------CEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC------------------CEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            889999999999999999999999999888777                  79999999999999999999999999999


Q ss_pred             CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152         218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                         ...++..+.+|...|.+++|+  +.+|++++.||.|++||+.+ +.....+. |...+..++|+|++++|++++ ||
T Consensus       341 ---~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg  412 (464)
T 3v7d_B          341 ---NGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTNLSAITTFYVSDNILVSGS-EN  412 (464)
T ss_dssp             ---TTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TT
T ss_pred             ---CCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCCCccEEEEEeCCCEEEEec-CC
Confidence               788999999999999999997  57999999999999999998 77666654 667788889999999999988 89


Q ss_pred             cEEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccccCCCcccc
Q psy8152         298 HFRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKY  352 (444)
Q Consensus       298 ~i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W  352 (444)
                      .|++|++.+++++...  .+...|.+++|+..          .++++++.++.+.+|
T Consensus       413 ~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~----------~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          413 QFNIYNLRSGKLVHANILKDADQIWSVNFKGK----------TLVAAVEKDGQSFLE  459 (464)
T ss_dssp             EEEEEETTTCCEEESCTTTTCSEEEEEEEETT----------EEEEEEEETTEEEEE
T ss_pred             eEEEEECCCCcEEehhhccCCCcEEEEEecCC----------EEEEEEEeCCeEEEE
Confidence            9999999999998863  37888999998633          456666677766555

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=3.4e-40  Score=308.46  Aligned_cols=274  Identities=11%  Similarity=0.124  Sum_probs=235.3

Q ss_pred             ccEEEecCCCcEEEEEcCCCccce--eeeeeecccCcccceEEEeeeccC----C---cEEEEEEcCCeEEEEeCCCCcc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCII--KNIQNVKYITNKASVLALNWGNVE----E---SELLIAYSGQKIKIYDTDFKNF   77 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~----~---~~l~~~~~d~~i~vw~~~~~~~   77 (444)
                      .+|++|+.||.|++|++..++...  .....+.  +|...|++++|+ |+    +   .+|++++.|+.|++|++.+++.
T Consensus        27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~-~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~  103 (397)
T 1sq9_A           27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF--VHKSGLHHVDVL-QAIERDAFELCLVATTSFSGDLLFYRITREDE  103 (397)
T ss_dssp             SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE--CCTTCEEEEEEE-EEEETTTEEEEEEEEEETTSCEEEEEEEECTT
T ss_pred             CeEEEEcCCCEEEEEECCCcccccCCCcceEEe--cCCCcEEEEEEe-cccccCCccccEEEEEcCCCCEEEEEccCCcc
Confidence            789999999999999998876200  0112222  899999999999 67    8   9999999999999999998876


Q ss_pred             -----ccceeeccc-----cccEEE--EE----eCCCe-EEEEecCCcEEEEEcCC------CCccc-----cc------
Q psy8152          78 -----NTNTDVSFG-----EGDIVG--VS----RYDEC-ILTAVKSGDVKLWRYKT------EPDQW-----TN------  123 (444)
Q Consensus        78 -----~~~~~~~~~-----~~~v~~--~s----~~~~~-l~~~~~dg~i~iw~~~~------~~~~~-----~~------  123 (444)
                           ...+.  .|     ...|.+  ++    |++++ |++++.+|.|++|++.+      ++.+.     .+      
T Consensus       104 ~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (397)
T 1sq9_A          104 TKKVIFEKLD--LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES  181 (397)
T ss_dssp             TCCEEEEEEC--CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC
T ss_pred             cccccceeec--ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc
Confidence                 55554  44     356654  57    78999 99999999999999998      66664     45      


Q ss_pred             -cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec---c---cceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         124 -FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN---V---SHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       124 -~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                       ..|...|.+++|+|++ +|++++.++.|++||+++++++..+..   |   ..                  .|++++|+
T Consensus       182 ~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~------------------~i~~i~~~  242 (397)
T 1sq9_A          182 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN------------------SIRSVKFS  242 (397)
T ss_dssp             SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC------------------CEEEEEEC
T ss_pred             ccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCC------------------ccceEEEC
Confidence             3488999999999999 999999999999999999999988887   5   55                  79999999


Q ss_pred             cCCCEEEEEeCC---ceEEEEEcCCCCCccceEEEeC-------------CCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         197 PNSDKVAVCSKQ---GYVRVYDPKITTQRRPVLKVDI-------------PDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       197 ~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      |++++|++++.|   +.|++||++   ...++..+..             |...|.+++|+|++++|++++.||.|++||
T Consensus       243 ~~~~~l~~~~~d~~~g~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  319 (397)
T 1sq9_A          243 PQGSLLAIAHDSNSFGCITLYETE---FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD  319 (397)
T ss_dssp             SSTTEEEEEEEETTEEEEEEEETT---TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             CCCCEEEEEecCCCCceEEEEECC---CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            999999999999   999999999   7788888888             899999999999999999999999999999


Q ss_pred             cCCCCcceeEec------cc---------------cCceeEEEecCCC----------CEEEEEECCCcEEEEEcCCCc
Q psy8152         261 LRGKGKPCYKYK------GF---------------AGCVKDIACPLNE----------NLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       261 ~~~~~~~~~~~~------~h---------------~~~i~~~~~s~~~----------~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      +++ ++++..+.      +|               ...|++++|+|++          ++|++++.||.|++|++.+++
T Consensus       320 ~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          320 VKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             TTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             cCC-CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            999 99999999      88               9999999999998          799999999999999998763

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.9e-39  Score=305.65  Aligned_cols=276  Identities=12%  Similarity=0.152  Sum_probs=234.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ++.|++|. |++|+||++.+++.    .+.+...+|...|++|+|+ |++++|++|+.||.|+||++.+++.+..+.  +
T Consensus       116 ~n~lAvgl-d~tV~lWd~~tg~~----~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~v~iWd~~~~~~~~~~~--~  187 (420)
T 4gga_A          116 GNVLAVAL-DNSVYLWSASSGDI----LQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT--S  187 (420)
T ss_dssp             TSEEEEEE-TTEEEEEETTTCCE----EEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEEC--C
T ss_pred             CCEEEEEe-CCEEEEEECCCCCE----EEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCeEEEEEcCCCcEEEEEe--C
Confidence            45677665 89999999999874    1233333788999999999 799999999999999999999999888775  7


Q ss_pred             ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---
Q psy8152          86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN---  161 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---  161 (444)
                      |...+.++++++.+|++|+.++.+++|+...... +..+..|...+..+.|+|++.++++++.|+.|++|++..++.   
T Consensus       188 h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~  267 (420)
T 4gga_A          188 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV  267 (420)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC
T ss_pred             CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce
Confidence            8999999999999999999999999999876543 345678999999999999999999999999999999987653   


Q ss_pred             -eeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEE--EeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         162 -IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAV--CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                       +.....+..                  .|.+++|+|.+ .++++  |+.|++|++||+.   ...++..+..+ ..+.+
T Consensus       268 ~~~~~~~~~~------------------~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~---t~~~~~~~~~~-~~v~~  325 (420)
T 4gga_A          268 PLQTFTQHQG------------------AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC---SGACLSAVDAH-SQVCS  325 (420)
T ss_dssp             CSEEECCCSS------------------CEEEEEECTTCTTEEEEEECTTTCEEEEEETT---TTEEEEEEECS-SCEEE
T ss_pred             eeeeecccCC------------------ceeeeeeCCCcccEEEEEeecCCCEEEEEeCC---ccccceeeccc-cceee
Confidence             333444444                  79999999977 56655  4579999999999   77777777755 45889


Q ss_pred             EEEccCCCEEEEEc--CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         238 ITTTNQSHYVIVGS--TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       238 ~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      +.|+|+++.|++++  .|+.|+|||+.+ ++++.++.+|.+.|++++|+|++++|+||+.|++|+||++....+..+
T Consensus       326 ~~~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~  401 (420)
T 4gga_A          326 ILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR  401 (420)
T ss_dssp             EEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred             eeecCCCCeEEEEEecCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence            99999999888754  799999999999 999999999999999999999999999999999999999987655443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3.8e-39  Score=294.22  Aligned_cols=273  Identities=11%  Similarity=0.204  Sum_probs=234.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++++ +|.|++|++.++.. ...+..+...+|...|++++|+ |++++|++++.|+.|++|++.+++.......
T Consensus        61 ~~~~~l~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  137 (337)
T 1gxr_A           61 NPTRHVYTGG-KGCVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAEL  137 (337)
T ss_dssp             SSSSEEEEEC-BSEEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEEC-TTSSEEEEEESSSEEEEEECCCC--EEEEEE
T ss_pred             cCCcEEEEcC-CCeEEEEECCCCCc-eeeeecccccCCCCcEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCCcceeeec
Confidence            4567788888 99999999987764 2223333333789999999999 7999999999999999999998875444444


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      ..|...+.++  +|++++|++++.++.|++|++.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus       138 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~  217 (337)
T 1gxr_A          138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ  217 (337)
T ss_dssp             ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred             ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce
Confidence            5677777655  67899999999999999999999988877778999999999999999999999999999999999888


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+... .                  .+.+++|+|++++|++++.++.|++|+++   ... ...+..|...|.+++|+
T Consensus       218 ~~~~~~~-~------------------~v~~~~~s~~~~~l~~~~~~~~i~~~~~~---~~~-~~~~~~~~~~v~~~~~~  274 (337)
T 1gxr_A          218 LQQHDFT-S------------------QIFSLGYCPTGEWLAVGMESSNVEVLHVN---KPD-KYQLHLHESCVLSLKFA  274 (337)
T ss_dssp             EEEEECS-S------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---SSC-EEEECCCSSCEEEEEEC
T ss_pred             EeeecCC-C------------------ceEEEEECCCCCEEEEEcCCCcEEEEECC---CCC-eEEEcCCccceeEEEEC
Confidence            7776432 3                  59999999999999999999999999999   333 45678899999999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      |++++|++++.+|.|++|++.+ ++.+... .|...|++++|+|++++|++++.||.|++|++
T Consensus       275 ~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          275 YCGKWFVSTGKDNLLNAWRTPY-GASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             TTSSEEEEEETTSEEEEEETTT-CCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCCCEEEEecCCCcEEEEECCC-CeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            9999999999999999999998 8777554 48889999999999999999999999999996

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.6e-41  Score=317.47  Aligned_cols=290  Identities=13%  Similarity=0.120  Sum_probs=231.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      +|...|+||+|+|.++++||+|+.||.|+|||+.+++....+...+|...|.++  +| ++.+|++|+.||+|++||+.+
T Consensus       117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~  196 (435)
T 4e54_B          117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG  196 (435)
T ss_dssp             ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred             CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence            688899999999546789999999999999999988777666666888888776  55 578999999999999999987


Q ss_pred             CCcccccc--ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         117 EPDQWTNF--NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       117 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      +.......  .+...+.+++|+|++.+|++|+.||.|++||++ ++.+..+..|..                  .|++++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~------------------~v~~v~  257 (435)
T 4e54_B          197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKK------------------KVTHVA  257 (435)
T ss_dssp             CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSS------------------CEEEEE
T ss_pred             CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccc------------------eEEeee
Confidence            65442222  234567899999999999999999999999986 456667777766                  799999


Q ss_pred             EecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc
Q psy8152         195 FLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       195 ~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  273 (444)
                      |+|++ .+|++++.|+.|++||++.......+....+|...|++++|+|++++|++++.||.|+|||+.+ +.....+..
T Consensus       258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~-~~~~~~~~~  336 (435)
T 4e54_B          258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ-WDCPLGLIP  336 (435)
T ss_dssp             ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS-SSSEEEECC
T ss_pred             ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC-CccceEEec
Confidence            99998 5788999999999999982222223334457889999999999999999999999999999999 888777766


Q ss_pred             ccC------ceeEEEecCCCCEEEEEEC------------CCcEEEEEcCCCceEEEee--cCCceeEE-EEcCCCcccc
Q psy8152         274 FAG------CVKDIACPLNENLILSVSL------------DRHFRVHDFHSKKLLRKDY--MQSRLTSI-LVRSDFSLEN  332 (444)
Q Consensus       274 h~~------~i~~~~~s~~~~~l~s~~~------------dg~i~vw~~~~~~~~~~~~--~~~~i~~~-~~~~~~~~~~  332 (444)
                      |..      .+..+.|+|++.++++++.            ++.|++|++.+++++..+.  |...|.++ +|+       
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fs-------  409 (435)
T 4e54_B          337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFN-------  409 (435)
T ss_dssp             CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEEC-------
T ss_pred             ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEEC-------
Confidence            542      2345577887777776642            3579999999999988875  66778877 466       


Q ss_pred             cchhhhhccccccCCCccccCCCcccc
Q psy8152         333 ETKKEEQEHSEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       333 ~~~~~~~~~s~~~d~~i~~W~~~~~~~  359 (444)
                        |++.+|++++ |+.|+||++..++.
T Consensus       410 --pdg~~lasg~-d~~i~iW~~~~gk~  433 (435)
T 4e54_B          410 --PMGDTLASAM-GYHILIWSQQEART  433 (435)
T ss_dssp             --TTSSCEEEEC-SSEEEECCCC----
T ss_pred             --CCCCEEEEEc-CCcEEEEECCcCee
Confidence              4467888776 78999999987654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=8.1e-41  Score=308.89  Aligned_cols=283  Identities=9%  Similarity=0.097  Sum_probs=239.3

Q ss_pred             CcccceEEEeeecc---CCcEEEEEEcCCeEEEEeCCCCccccceeecc---ccccEEE--EEeC----CCeEEEEecCC
Q psy8152          40 TNKASVLALNWGNV---EESELLIAYSGQKIKIYDTDFKNFNTNTDVSF---GEGDIVG--VSRY----DECILTAVKSG  107 (444)
Q Consensus        40 ~h~~~v~~~~~~~~---~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~---~~~~v~~--~s~~----~~~l~~~~~dg  107 (444)
                      +|..+|++++|+|.   ....+++++.++.|++|++.+++.+..+..+.   |...|.+  ++|+    +.+|++++.||
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg   95 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG   95 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence            79999999999941   35667777778899999999888776665332   4455655  5677    56899999999


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeee---ecccceeeEeeeCCCccc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSA---KNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  183 (444)
                      .|++|++.+++.+..+..|...|.+++|+| ++.+|++++.||.|++||+++++.+..+   ..+..             
T Consensus        96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-------------  162 (366)
T 3k26_A           96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD-------------  162 (366)
T ss_dssp             EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-------------
T ss_pred             EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-------------
Confidence            999999999998887778999999999999 9999999999999999999999888877   44555             


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE----------------------------EEeCCCCCe
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL----------------------------KVDIPDVAL  235 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------------~~~~~~~~i  235 (444)
                           .|++++|+|++++|++++.|+.|++||++   ....+.                            ....|...|
T Consensus       163 -----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  234 (366)
T 3k26_A          163 -----EVLSADYDLLGEKIMSCGMDHSLKLWRIN---SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYV  234 (366)
T ss_dssp             -----CEEEEEECTTSSEEEEEETTSCEEEEESC---SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCC
T ss_pred             -----ceeEEEECCCCCEEEEecCCCCEEEEECC---CCccccccceeEEecCCCCcccccceeeccCccccccCCcceE
Confidence                 79999999999999999999999999998   443332                            223488999


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--------------eeEeccccCceeEEEecCC--CCEEEEEECCCcE
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--------------CYKYKGFAGCVKDIACPLN--ENLILSVSLDRHF  299 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--------------~~~~~~h~~~i~~~~~s~~--~~~l~s~~~dg~i  299 (444)
                      .+++|+  +++|++++.++.|++||+.+ ...              +..+.+|...|++++|+|+  +++|++++.||.|
T Consensus       235 ~~~~~~--~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i  311 (366)
T 3k26_A          235 DCVRWL--GDLILSKSCENAIVCWKPGK-MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL  311 (366)
T ss_dssp             CEEEEE--TTEEEEECSSSEEEEEEESS-TTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCE
T ss_pred             EEEEEc--CCEEEEEecCCEEEEEeCCC-ccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcE
Confidence            999998  77999999999999999987 543              7778889999999999999  9999999999999


Q ss_pred             EEEEcCCCceE----EEee-c--CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         300 RVHDFHSKKLL----RKDY-M--QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       300 ~vw~~~~~~~~----~~~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ++|++.+++++    ..+. |  ...|.+++|+++         +.++++++.|+.|++|++.
T Consensus       312 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          312 YVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD---------SSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             EEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT---------SSEEEEEETTSEEEEEEC-
T ss_pred             EEEECCCCCCccccceEEcccccCCceEEEEeCCC---------CCeEEEEeCCCEEEEEEec
Confidence            99999987543    2443 4  688999999854         5789999999999999975

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1e-40  Score=314.42  Aligned_cols=281  Identities=11%  Similarity=0.078  Sum_probs=240.8

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT  122 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~  122 (444)
                      ..+++++|+ |++++|++++.|+.|++|++.+++....+..+ ....+..+++++++|++++.+|.|++|++.+++....
T Consensus        57 ~~~~~~~~s-~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  134 (420)
T 3vl1_A           57 DAGKGNTFE-KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI  134 (420)
T ss_dssp             BCCTTCEEE-EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE
T ss_pred             ccccceeee-ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee
Confidence            445689999 79999999999999999999988887776532 1223334578999999999999999999999888876


Q ss_pred             ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152         123 NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV  202 (444)
Q Consensus       123 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  202 (444)
                      +..|...|++++|+|++++|++|+.|+.|++||+.+++.+..+..|..                  .|++++|+|++++|
T Consensus       135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~l  196 (420)
T 3vl1_A          135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA------------------TVTDIAIIDRGRNV  196 (420)
T ss_dssp             TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS------------------CEEEEEEETTTTEE
T ss_pred             cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC------------------cEEEEEEcCCCCEE
Confidence            678999999999999999999999999999999999998888888777                  89999999999999


Q ss_pred             EEEeCCceEEEEEcCCCCCccceEEEeCC------------------------CCCeeEEEEccCCCEEEEEcCCCcEEE
Q psy8152         203 AVCSKQGYVRVYDPKITTQRRPVLKVDIP------------------------DVALSCITTTNQSHYVIVGSTTGDMMA  258 (444)
Q Consensus       203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------------------~~~i~~~~~~~~~~~l~~~~~dg~i~i  258 (444)
                      ++++.|+.|++||++   ..+.+..+..+                        ...+.+++|+|++++|++|+.+|.|++
T Consensus       197 ~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  273 (420)
T 3vl1_A          197 LSASLDGTIRLWECG---TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV  273 (420)
T ss_dssp             EEEETTSCEEEEETT---TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred             EEEcCCCcEEEeECC---CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence            999999999999999   67777777642                        244555666889999999999999999


Q ss_pred             EEcCCCCcceeEec-cccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCce-EEEee--cCCceeEEEEcCCCccccc
Q psy8152         259 VDLRGKGKPCYKYK-GFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKL-LRKDY--MQSRLTSILVRSDFSLENE  333 (444)
Q Consensus       259 wd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~-~~~~~--~~~~i~~~~~~~~~~~~~~  333 (444)
                      ||+++ ++.+..+. .|...|++++|+|+++ +|++++.||.|++||+.+++. +..+.  +...+.++.+.+       
T Consensus       274 ~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-------  345 (420)
T 3vl1_A          274 HNVFS-KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAA-------  345 (420)
T ss_dssp             EETTT-CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEET-------
T ss_pred             EECCC-CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCC-------
Confidence            99999 77777665 5889999999999998 999999999999999998754 55544  667788886542       


Q ss_pred             chhhhhccccccCCCccccCCCcc
Q psy8152         334 TKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       334 ~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                         +.++++++.|+.|++|++...
T Consensus       346 ---~~~l~s~~~d~~v~iw~~~~~  366 (420)
T 3vl1_A          346 ---GALFVSSGFDTSIKLDIISDP  366 (420)
T ss_dssp             ---TEEEEEETTTEEEEEEEECCT
T ss_pred             ---CCEEEEecCCccEEEEeccCC
Confidence               368999999999999998763

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=9.8e-41  Score=309.21  Aligned_cols=288  Identities=13%  Similarity=0.120  Sum_probs=242.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc--cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN--FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      .|..+|++++|+ |++++|++|+.++.|++|++.+++  ....+.  +|...|.++  +|++++|++++.|+.|++|++.
T Consensus         6 ~~~~~i~~~~~s-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            6 FLVEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             SCSSCCCEEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             ccCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence            488999999999 799999999999999999999887  555554  677777655  7889999999999999999998


Q ss_pred             CCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---eeee-ecccceeeEeeeCCCcccccCccc
Q psy8152         116 TEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN---IFSA-KNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       116 ~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      +++...  ....|...|.+++|+|++++|++++.++.|++|++..+..   ...+ ..|..                  .
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~------------------~  144 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS------------------T  144 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS------------------C
T ss_pred             CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC------------------C
Confidence            886443  3466899999999999999999999999999999988653   2222 23333                  7


Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCC---------------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKI---------------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                      |++++|+|++++|++++.|+.|++||++.               .....++..+..|...|.+++|+|++++|++++.|+
T Consensus       145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  224 (372)
T 1k8k_C          145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS  224 (372)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred             eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence            99999999999999999999999999641               014567777888999999999999999999999999


Q ss_pred             cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC--Cce-----------------------
Q psy8152         255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS--KKL-----------------------  309 (444)
Q Consensus       255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~--~~~-----------------------  309 (444)
                      .|++||+++ ++++..+..|..+|++++|+|++.+|+++ .|+.|++|++.+  ++.                       
T Consensus       225 ~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (372)
T 1k8k_C          225 TVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF  302 (372)
T ss_dssp             EEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred             EEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence            999999999 99999999999999999999999988877 999999999987  421                       


Q ss_pred             ---------E------EEe--ecCCceeEEEEcCCCcccccchhh---hhccccccCCCccccCCCccc
Q psy8152         310 ---------L------RKD--YMQSRLTSILVRSDFSLENETKKE---EQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       310 ---------~------~~~--~~~~~i~~~~~~~~~~~~~~~~~~---~~~~s~~~d~~i~~W~~~~~~  358 (444)
                               .      ..+  .|..+|++++|.+.        ++   .+++|++.||.|++|++...+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--------~g~~~~~l~s~~~Dg~i~~W~~~~~~  363 (372)
T 1k8k_C          303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSG--------GKAKCSQFCTTGMDGGMSIWDVRSLE  363 (372)
T ss_dssp             HHCCCCC---------CCCSSSSSSCEEEEEEEES--------TTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             hhcccccccccCccccccccccccCCcceeEEecC--------CCcceeeEEEecCCCceEEEEecChh
Confidence                     0      122  47889999987532        23   689999999999999987644

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.9e-40  Score=335.60  Aligned_cols=337  Identities=12%  Similarity=0.075  Sum_probs=253.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-----
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN-----   80 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-----   80 (444)
                      +.+|++++.|+.|++|++.+++.    +..+   .|...|++++|+ |++++|++|+.||.|++||+.++++...     
T Consensus        69 g~~L~S~s~D~~v~lWd~~~~~~----~~~~---~~~~~V~~v~~s-p~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~  140 (902)
T 2oaj_A           69 GIYLVVINAKDTVYVLSLYSQKV----LTTV---FVPGKITSIDTD-ASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNL  140 (902)
T ss_dssp             TTEEEEEETTCEEEEEETTTCSE----EEEE---ECSSCEEEEECC-TTCSEEEEEETTSCEEEEETTTTEEEEEEECCH
T ss_pred             CCEEEEEECcCeEEEEECCCCcE----EEEE---cCCCCEEEEEEC-CCCCEEEEEcCCCcEEEEECCCCccccceeccc
Confidence            45799999999999999988764    1222   367899999999 7999999999999999999988775310     


Q ss_pred             ----eeeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCCcccccccc------------------CCCeEEEEE
Q psy8152          81 ----TDVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNV------------------GPQLECMKH  135 (444)
Q Consensus        81 ----~~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------------------~~~v~~~~~  135 (444)
                          ....+|..+|.++  +|+ +.+|++|+.++.| +||+.+++++..+..|                  ...|++++|
T Consensus       141 ~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f  219 (902)
T 2oaj_A          141 QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY  219 (902)
T ss_dssp             HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred             cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence                1124566777665  564 4689999999999 9999988776544433                  578999999


Q ss_pred             eccCCEEEEeeCCCeEEEEEcCCceeeee--ee---cc-------------cceeeEeee----CCC-------------
Q psy8152         136 NKHSNIIATGGKENDLKLWDLNTTKNIFS--AK---NV-------------SHRVLVYSV----KPD-------------  180 (444)
Q Consensus       136 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~--~~---~~-------------~~~~~~~~~----~~~-------------  180 (444)
                      +|++.+|++|+.||.|++||+++++++..  +.   .+             ...+..+++    +|+             
T Consensus       220 spdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~  299 (902)
T 2oaj_A          220 HPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISR  299 (902)
T ss_dssp             CTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTT
T ss_pred             cCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCC
Confidence            99999999999999999999988765432  10   00             111111111    000             


Q ss_pred             --------------------------------------------------------------------------c----c
Q psy8152         181 --------------------------------------------------------------------------E----F  182 (444)
Q Consensus       181 --------------------------------------------------------------------------~----~  182 (444)
                                                                                                +    +
T Consensus       300 ~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~  379 (902)
T 2oaj_A          300 GDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETM  379 (902)
T ss_dssp             SSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEE
T ss_pred             CCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEE
Confidence                                                                                      0    0


Q ss_pred             cc------c-----------CccceeEE----------------------------------EEecCCCEEEEEeCCceE
Q psy8152         183 DL------R-----------RPVWVNGI----------------------------------SFLPNSDKVAVCSKQGYV  211 (444)
Q Consensus       183 ~~------~-----------~~~~i~~~----------------------------------~~~~~~~~l~~~~~d~~i  211 (444)
                      +.      .           +...|+++                                  +|+|++++|++|+.|++|
T Consensus       380 ~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtV  459 (902)
T 2oaj_A          380 LYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSV  459 (902)
T ss_dssp             ETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEE
T ss_pred             ECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcE
Confidence            00      0           00123333                                  346788899999999999


Q ss_pred             EEEEcCCCCCcc--ceEEE--e-----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-----------------
Q psy8152         212 RVYDPKITTQRR--PVLKV--D-----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG-----------------  265 (444)
Q Consensus       212 ~i~d~~~~~~~~--~~~~~--~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----------------  265 (444)
                      ++||+. .....  ....+  .     +|...|.+++|+|++++||+|+.||+|+||++.+ +                 
T Consensus       460 rlWd~~-~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~-~~~~~~~~~~~~~~~~~~  537 (902)
T 2oaj_A          460 RIYDAS-HGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEV-NQFYSVENRPESGDLEMN  537 (902)
T ss_dssp             EEEESS-CCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEE-CCC---------------
T ss_pred             EEEECC-CccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecC-ccccCccccCCCccccee
Confidence            999998 22211  11221  1     7888999999999999999999999999999986 4                 


Q ss_pred             ----------------------------cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE-----
Q psy8152         266 ----------------------------KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK-----  312 (444)
Q Consensus       266 ----------------------------~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~-----  312 (444)
                                                  +++..+.+|.+.|++|+|+|+| +||+|+.|++|+|||+.++.++..     
T Consensus       538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~  616 (902)
T 2oaj_A          538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIRE  616 (902)
T ss_dssp             CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG
T ss_pred             eeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhH
Confidence                                        2367788999999999999999 999999999999999988877642     


Q ss_pred             e--ecCCceeEEEEc-----CCCcccccchhhhhccccccCCCccccCC---Cccccc
Q psy8152         313 D--YMQSRLTSILVR-----SDFSLENETKKEEQEHSEEKGDSDEKYDP---EHFEMN  360 (444)
Q Consensus       313 ~--~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~s~~~d~~i~~W~~---~~~~~~  360 (444)
                      +  .|...|++++|+     ++-      +++.++++++.|++|++|++   .+++..
T Consensus       617 ~~~gh~~~V~sv~Fs~~~~~~Dg------~~~~~l~sgs~D~tv~~wd~~p~~~g~~~  668 (902)
T 2oaj_A          617 ISGAQSACVTCIEFVIMEYGDDG------YSSILMVCGTDMGEVITYKILPASGGKFD  668 (902)
T ss_dssp             TCSSCCCCEEEEEEEEEECTTSS------SEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred             hccccccceEEEEEEEEecCCCC------CcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence            1  467779999998     441      22478999999999999998   454443

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-40  Score=308.94  Aligned_cols=318  Identities=14%  Similarity=0.142  Sum_probs=249.5

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCc-EEEEEEcCCeEEEEeC----CCCc------cccceee
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEES-ELLIAYSGQKIKIYDT----DFKN------FNTNTDV   83 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~----~~~~------~~~~~~~   83 (444)
                      ...+.+|++....      ..+....|...|++++|+ |++. +|++|+.|+.|++|++    .+++      ....+..
T Consensus        24 ~~~~~~~~~~~~~------~~~~~~~~~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~   96 (425)
T 1r5m_A           24 NSIDSSDDLDGFV------KILKEIVKLDNIVSSTWN-PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH   96 (425)
T ss_dssp             ----------CCC------EECEEEEECSCCSEEEEC-SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC
T ss_pred             ccccccccchhhh------hheeeeeccCceEEEEEC-CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccc
Confidence            3345667665443      333333678999999999 7888 9999999999999999    8777      2333321


Q ss_pred             --c------cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152          84 --S------FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKL  153 (444)
Q Consensus        84 --~------~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  153 (444)
                        .      +|...|.++  +|++++|++++.+|.|++|+ .+++.+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus        97 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  175 (425)
T 1r5m_A           97 PFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTIL  175 (425)
T ss_dssp             CCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred             cccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEE
Confidence              1      145566655  68899999999999999999 566666677889999999999999999999999999999


Q ss_pred             EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      ||+.+++.+..+..+...........   .......+.+++|+|+ ..+++++.++.|++||++   ...++..+..|..
T Consensus       176 wd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~---~~~~~~~~~~~~~  248 (425)
T 1r5m_A          176 WNVISGTVMQHFELKETGGSSINAEN---HSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQIT---EKTPTGKLIGHHG  248 (425)
T ss_dssp             EETTTTEEEEEECCC------------------CCCBSCCEEEET-TEEEEECGGGCEEEEETT---CSSCSEEECCCSS
T ss_pred             EECCCCcEEEEeeccccCccceeecc---ccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcC---CCceeeeeccCCC
Confidence            99999988887766554100000000   0000112889999997 568899999999999999   7788888889999


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      .|.+++|+|++++|++++.++.|++||+++ ++++..+.+|...|.+++|+|++ +|++++.|+.|++|++.+++++..+
T Consensus       249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~  326 (425)
T 1r5m_A          249 PISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS  326 (425)
T ss_dssp             CEEEEEEETTTTEEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             ceEEEEECCCCCEEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence            999999999999999999999999999999 99999999999999999999999 9999999999999999999988887


Q ss_pred             e-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         314 Y-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       314 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      . |...+.+++|+++         +.++++++.|+.|++|++....
T Consensus       327 ~~~~~~i~~~~~s~~---------~~~l~~~~~dg~i~i~~~~~~~  363 (425)
T 1r5m_A          327 IVDGVPIFAGRISQD---------GQKYAVAFMDGQVNVYDLKKLN  363 (425)
T ss_dssp             ECTTCCEEEEEECTT---------SSEEEEEETTSCEEEEECHHHH
T ss_pred             ccCCccEEEEEEcCC---------CCEEEEEECCCeEEEEECCCCc
Confidence            6 7889999998854         5789999999999999998765

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.5e-39  Score=289.60  Aligned_cols=278  Identities=14%  Similarity=0.149  Sum_probs=241.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...|++++|  +++.+|++|+.||.|++|++.+++....+.  .|...|.+  ++|++++|++++.++.|++|++...
T Consensus        16 ~h~~~v~~~~~--~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~   91 (313)
T 3odt_A           16 GHDQDVRDVVA--VDDSKVASVSRDGTVRLWSKDDQWLGTVVY--TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT   91 (313)
T ss_dssp             CCSSCEEEEEE--EETTEEEEEETTSEEEEEEESSSEEEEEEE--ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred             CCCCCcEEEEe--cCCCEEEEEEcCCcEEEEECCCCEEEEEee--cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence            89999999999  378899999999999999999888777776  44556654  5789999999999999999998765


Q ss_pred             ---CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         118 ---PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       118 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                         +....+..|...|.+++|  ++++|++++.|+.|++||  .++.+..+..+..                  .+.+++
T Consensus        92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~------------------~v~~~~  149 (313)
T 3odt_A           92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA------------------SVWDAK  149 (313)
T ss_dssp             TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS------------------CEEEEE
T ss_pred             CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC------------------ceeEEE
Confidence               445467779999999999  578999999999999999  6677777777776                  799999


Q ss_pred             Eec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         195 FLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       195 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      |+| ++++|++++.|+.|++||..     .....+.. |...+.+++|+|++. |++++.+|.|++||+++ ++++..+.
T Consensus       150 ~~~~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~-~~~~~~~~  222 (313)
T 3odt_A          150 VVSFSENKFLTASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT-GDVLRTYE  222 (313)
T ss_dssp             EEETTTTEEEEEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT-CCEEEEEE
T ss_pred             EccCCCCEEEEEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc-hhhhhhhh
Confidence            998 88999999999999999954     45555666 888999999999998 89999999999999999 99999999


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccc
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEK  351 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~  351 (444)
                      +|...|++++|+|++ .|++++.||.|++|++.+++++..+. +...|.+++|+++         +. +++++.|+.|++
T Consensus       223 ~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---------~~-~~~~~~dg~i~i  291 (313)
T 3odt_A          223 GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN---------GD-IIVGSSDNLVRI  291 (313)
T ss_dssp             CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT---------SC-EEEEETTSCEEE
T ss_pred             cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC---------CC-EEEEeCCCcEEE
Confidence            999999999999999 68999999999999999999988876 6778999999865         33 667999999999


Q ss_pred             cCCCcccccc
Q psy8152         352 YDPEHFEMNQ  361 (444)
Q Consensus       352 W~~~~~~~~~  361 (444)
                      |++..++...
T Consensus       292 w~~~~~~~~~  301 (313)
T 3odt_A          292 FSQEKSRWAS  301 (313)
T ss_dssp             EESCGGGCCC
T ss_pred             EeCCCCceee
Confidence            9998766543

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=6.2e-40  Score=303.00  Aligned_cols=288  Identities=13%  Similarity=0.167  Sum_probs=233.2

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccC----CcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVE----ESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      ....+++++.++.|++|++.+++. ...++......|...|++++|+ |+    +.+|++|+.||.|++|++.+++.+..
T Consensus        33 ~~~~~~~~~~~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~  110 (366)
T 3k26_A           33 GDPLVFATVGSNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWT-YDSNTSHPLLAVAGSRGIIRIINPITMQCIKH  110 (366)
T ss_dssp             TSCEEEEEEETTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEE-ECTTTCCEEEEEEETTCEEEEECTTTCCEEEE
T ss_pred             CCceEEEECCCCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEec-cCCCCCCCEEEEecCCCEEEEEEchhceEeee
Confidence            345677888888999999987765 3344444433588999999999 56    67999999999999999999988887


Q ss_pred             eeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCCCCccccc---cccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152          81 TDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKTEPDQWTN---FNVGPQLECMKHNKHSNIIATGGKENDLKLW  154 (444)
Q Consensus        81 ~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  154 (444)
                      +.  +|...|.++  +| ++.+|++++.||.|++||+.+++.+..+   ..|...|.+++|+|++++|++++.||.|++|
T Consensus       111 ~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~  188 (366)
T 3k26_A          111 YV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW  188 (366)
T ss_dssp             EE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence            75  667777665  56 7899999999999999999998887655   5799999999999999999999999999999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCC----------------cccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPD----------------EFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI  218 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  218 (444)
                      |+++++.+..+....      .+.|+                .....+...|.+++|+  +++|++++.|+.|++||++ 
T Consensus       189 d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~-  259 (366)
T 3k26_A          189 RINSKRMMNAIKESY------DYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPG-  259 (366)
T ss_dssp             ESCSHHHHHHHHHHH------TCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEES-
T ss_pred             ECCCCccccccceeE------EecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCC-
Confidence            999876554433200      00000                0011134579999998  6899999999999999998 


Q ss_pred             CCCc------------cceEEEeCCCCCeeEEEEccC--CCEEEEEcCCCcEEEEEcCCCCccee----Eeccc--cCce
Q psy8152         219 TTQR------------RPVLKVDIPDVALSCITTTNQ--SHYVIVGSTTGDMMAVDLRGKGKPCY----KYKGF--AGCV  278 (444)
Q Consensus       219 ~~~~------------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~h--~~~i  278 (444)
                      ....            ..+..+..|...|++++|+|+  +++|++|+.||.|++||+.. ++++.    .+.+|  ...|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v  338 (366)
T 3k26_A          260 KMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV-EDPHKAKCTTLTHHKCGAAI  338 (366)
T ss_dssp             STTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS-SSGGGCEEEEECCTTCCSCE
T ss_pred             CccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC-CCCccccceEEcccccCCce
Confidence            2111            347778889999999999999  99999999999999999998 76443    67777  7899


Q ss_pred             eEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         279 KDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       279 ~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++++|+|++++|++++.||.|++|++.+
T Consensus       339 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~  366 (366)
T 3k26_A          339 RQTSFSRDSSILIAVCDDASIWRWDRLR  366 (366)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             EEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence            9999999999999999999999999853

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=300.57  Aligned_cols=275  Identities=14%  Similarity=0.162  Sum_probs=225.9

Q ss_pred             CCcccEEEecC---CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccC---CcEEEEEEcCCeEEEEeCCCCc-
Q psy8152           4 ADDYNIYIGSS---TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVE---ESELLIAYSGQKIKIYDTDFKN-   76 (444)
Q Consensus         4 ~~~~~l~~g~~---dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~l~~~~~d~~i~vw~~~~~~-   76 (444)
                      ....++++|+.   +|.|++|++.+++.     ......+|...|++++|+ |+   +.+|++|+.||.|++|++.+++ 
T Consensus        29 ~~~~l~~~~s~~~~d~~v~iw~~~~~~~-----~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~  102 (357)
T 3i2n_A           29 CSAKFVTMGNFARGTGVIQLYEIQHGDL-----KLLREIEKAKPIKCGTFG-ATSLQQRYLATGDFGGNLHIWNLEAPEM  102 (357)
T ss_dssp             TSSEEEEEEC--CCCEEEEEEEECSSSE-----EEEEEEEESSCEEEEECT-TCCTTTCCEEEEETTSCEEEECTTSCSS
T ss_pred             CCceEEEecCccCCCcEEEEEeCCCCcc-----cceeeecccCcEEEEEEc-CCCCCCceEEEecCCCeEEEEeCCCCCc
Confidence            34456677776   99999999998773     222233789999999999 56   6999999999999999999887 


Q ss_pred             cccceeeccccccEEEE--------EeCCCeEEEEecCCcEEEEEcCCCC-ccccccccCC----CeEEEE----EeccC
Q psy8152          77 FNTNTDVSFGEGDIVGV--------SRYDECILTAVKSGDVKLWRYKTEP-DQWTNFNVGP----QLECMK----HNKHS  139 (444)
Q Consensus        77 ~~~~~~~~~~~~~v~~~--------s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~  139 (444)
                      ....+.  +|...|.++        +|++++|++++.|+.|++|++.+++ .+..+..|..    .|.+++    |+|++
T Consensus       103 ~~~~~~--~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  180 (357)
T 3i2n_A          103 PVYSVK--GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE  180 (357)
T ss_dssp             CSEEEC--CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred             cEEEEE--ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC
Confidence            665554  778888776        5788999999999999999999886 4544444443    899998    67899


Q ss_pred             CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec---CCCEEEEEeCCceEEEEEc
Q psy8152         140 NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP---NSDKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       140 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~  216 (444)
                      ++|++++.++.|++||+++++.... ..+..                  .|.+++|+|   ++.+|++++.|+.|++||+
T Consensus       181 ~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~------------------~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~  241 (357)
T 3i2n_A          181 RVVCAGYDNGDIKLFDLRNMALRWE-TNIKN------------------GVCSLEFDRKDISMNKLVATSLEGKFHVFDM  241 (357)
T ss_dssp             CEEEEEETTSEEEEEETTTTEEEEE-EECSS------------------CEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred             CEEEEEccCCeEEEEECccCceeee-cCCCC------------------ceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence            9999999999999999999887544 33444                  699999999   8999999999999999999


Q ss_pred             CCCCCccceEEE-----eCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCCCC-------------------cceeEe
Q psy8152         217 KITTQRRPVLKV-----DIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRGKG-------------------KPCYKY  271 (444)
Q Consensus       217 ~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~-------------------~~~~~~  271 (444)
                      +   ...++..+     ..|...|++++|+|+++ +|++++.||.|++||++. +                   +++..+
T Consensus       242 ~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~  317 (357)
T 3i2n_A          242 R---TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY-PIQRSKKDSEGIEMGVAGSVSLLQNV  317 (357)
T ss_dssp             E---EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC-CSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred             c---CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC-CcccccccCCCCccccccccceeecc
Confidence            8   45444444     38999999999999998 899999999999999986 3                   356778


Q ss_pred             ccccCceeEEEecCCCCEEE-EEECCCcEEEEEcCCCce
Q psy8152         272 KGFAGCVKDIACPLNENLIL-SVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~~~l~-s~~~dg~i~vw~~~~~~~  309 (444)
                      .+|...|++++|+|++++|+ +++.||.|++|++.+.++
T Consensus       318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            89999999999999999888 899999999999987654

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-39  Score=332.82  Aligned_cols=327  Identities=10%  Similarity=0.042  Sum_probs=248.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+||+|+.||.|++|+....+.       +..+.|..+|++++|+ | +.+|++++.|++|+|||+.+++++..+. 
T Consensus        27 pdg~~lAsgs~Dg~I~lw~~~~~~~-------~~~~~~~~~V~~l~fs-p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-   96 (902)
T 2oaj_A           27 FTQNLLAIATVTGEVHIYGQQQVEV-------VIKLEDRSAIKEMRFV-K-GIYLVVINAKDTVYVLSLYSQKVLTTVF-   96 (902)
T ss_dssp             TTTTEEEEEETTSEEEEECSTTCEE-------EEECSSCCCEEEEEEE-T-TTEEEEEETTCEEEEEETTTCSEEEEEE-
T ss_pred             CCCCEEEEEeCCCEEEEEeCCCcEE-------EEEcCCCCCEEEEEEc-C-CCEEEEEECcCeEEEEECCCCcEEEEEc-
Confidence            4568999999999999999766542       2223688999999999 5 7799999999999999999998887774 


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcc-----------ccccccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQ-----------WTNFNVGPQLECMKHNK-HSNIIATGGKEN  149 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~  149 (444)
                        |...|.++  +|++++|++|+.||.|++||+.++++.           ....+|..+|.+++|+| ++.+|++|+.|+
T Consensus        97 --~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg  174 (902)
T 2oaj_A           97 --VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV  174 (902)
T ss_dssp             --CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred             --CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence              44556555  689999999999999999999987653           23456899999999999 467999999999


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCc-----ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC---
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE-----FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ---  221 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---  221 (444)
                      .| +||+++++++..+..+...     ..|.+     ....+...|++++|+|++++|++++.|++|++||+++...   
T Consensus       175 ~v-lWd~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~  248 (902)
T 2oaj_A          175 TL-TYSLVENEIKQSFIYELPP-----FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA  248 (902)
T ss_dssp             EE-EEETTTTEEEEEECCCBCT-----TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred             cE-EEECCCCceEEEEecccCC-----cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence            99 9999999888777654110     00000     0011234699999999999999999999999999862100   


Q ss_pred             ----------------------ccceE-------------------------------EEe-------------------
Q psy8152         222 ----------------------RRPVL-------------------------------KVD-------------------  229 (444)
Q Consensus       222 ----------------------~~~~~-------------------------------~~~-------------------  229 (444)
                                            ...+.                               .+.                   
T Consensus       249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~  328 (902)
T 2oaj_A          249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYY  328 (902)
T ss_dssp             ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHH
T ss_pred             EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhh
Confidence                                  00000                               000                   


Q ss_pred             -----------CC-----------------------------------------------------------CCCeeE--
Q psy8152         230 -----------IP-----------------------------------------------------------DVALSC--  237 (444)
Q Consensus       230 -----------~~-----------------------------------------------------------~~~i~~--  237 (444)
                                 .+                                                           ...|++  
T Consensus       329 ~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~  408 (902)
T 2oaj_A          329 ANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSM  408 (902)
T ss_dssp             HSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEE
T ss_pred             cCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEE
Confidence                       00                                                           001111  


Q ss_pred             --------------------------------EEEccCCCEEEEEcCCCcEEEEEcCCCCcce--eEe----c-----cc
Q psy8152         238 --------------------------------ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC--YKY----K-----GF  274 (444)
Q Consensus       238 --------------------------------~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~----~-----~h  274 (444)
                                                      ++|+|++++|++|+.|++|++||+.. +...  ..+    .     +|
T Consensus       409 ~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~-g~~~~~~~~~~~l~~~~~~~h  487 (902)
T 2oaj_A          409 AASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASH-GDIQDNASFEVNLSRTLNKAK  487 (902)
T ss_dssp             EEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSC-CTTTTTBCEEEEHHHHTTCSS
T ss_pred             EEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCC-ccccCCceEEeechhhcCCCC
Confidence                                            22356778899999999999999887 5422  111    1     78


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc---------------------------------------------e
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK---------------------------------------------L  309 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~---------------------------------------------~  309 (444)
                      ...|++++|+|++++||+|+.||+|+||++.+++                                             +
T Consensus       488 ~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  567 (902)
T 2oaj_A          488 ELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMP  567 (902)
T ss_dssp             SCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEE
T ss_pred             CCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccce
Confidence            8899999999999999999999999999998662                                             2


Q ss_pred             EEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccc
Q psy8152         310 LRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       310 ~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~  359 (444)
                      +..+. |.+.|++++|++         ++ +|++++.|++|+|||+.....
T Consensus       568 ~~~l~~h~~~V~svafSp---------dG-~lAsgs~D~tv~lwd~~~~~~  608 (902)
T 2oaj_A          568 STAVHANKGKTSAINNSN---------IG-FVGIAYAAGSLMLIDRRGPAI  608 (902)
T ss_dssp             EEEECCCSCSEEEEEECB---------TS-EEEEEETTSEEEEEETTTTEE
T ss_pred             eEEEEcCCCcEEEEEecC---------Cc-EEEEEeCCCcEEEEECCCCeE
Confidence            44444 889999999884         46 899999999999999876544

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.3e-41  Score=315.90  Aligned_cols=286  Identities=6%  Similarity=0.017  Sum_probs=223.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--ccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--NFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      .|..+|++++|+ |++++|++|+.|+.|+||++.++  +....+.  +|...|.++  +|++++|++++.|+.|++|++.
T Consensus         9 ~~~~~v~~~~~s-~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~   85 (377)
T 3dwl_C            9 ILPKPSYEHAFN-SQRTEFVTTTATNQVELYEQDGNGWKHARTFS--DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR   85 (377)
T ss_dssp             ECSSCCSCCEEC-SSSSEEECCCSSSCBCEEEEETTEEEECCCBC--CCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred             cCCCcEEEEEEC-CCCCEEEEecCCCEEEEEEccCCceEEEEEEe--cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence            356899999999 79999999999999999999987  5555554  677777665  6789999999999999999999


Q ss_pred             CCC---ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---eeeeec-ccceeeEeeeCCCcccccCcc
Q psy8152         116 TEP---DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN---IFSAKN-VSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       116 ~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      +++   ....+..|...|.+++|+|++++|++++.|+.|++||+++++.   ...+.. |..                  
T Consensus        86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~------------------  147 (377)
T 3dwl_C           86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS------------------  147 (377)
T ss_dssp             ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS------------------
T ss_pred             CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC------------------
Confidence            877   4445778999999999999999999999999999999998763   555555 555                  


Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCCC---------------CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKIT---------------TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT  253 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  253 (444)
                      .|++++|+|++++|++++.|+.|++||+...               ....++..+ .|...|.+++|+|++++|++++.|
T Consensus       148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d  226 (377)
T 3dwl_C          148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD  226 (377)
T ss_dssp             CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT
T ss_pred             CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC
Confidence            7999999999999999999999999998510               023455555 899999999999999999999999


Q ss_pred             CcEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc--eE-----------------
Q psy8152         254 GDMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK--LL-----------------  310 (444)
Q Consensus       254 g~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~--~~-----------------  310 (444)
                      |.|++||+.+ ++.    +..+.+|..+|++++|+|++++|++++.++.+ +|+.....  ..                 
T Consensus       227 ~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (377)
T 3dwl_C          227 SSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGN  304 (377)
T ss_dssp             TEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSS
T ss_pred             CcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccc
Confidence            9999999999 777    88889999999999999999999988766655 66654211  00                 


Q ss_pred             -----------------EE-----------------eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         311 -----------------RK-----------------DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       311 -----------------~~-----------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                                       ..                 ..|...|+++.+.+...     .....++|++.||.|++|++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~-----~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          305 TGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTP-----GNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             BCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEET-----TEEEEEEEEETTSEEEEECC
T ss_pred             cccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCC-----CceEEEEeecCCCcEEEecC
Confidence                             00                 01777888888654311     11136999999999999985

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.6e-39  Score=289.57  Aligned_cols=277  Identities=14%  Similarity=0.129  Sum_probs=235.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccc
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTN   80 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~   80 (444)
                      .++.+|++|+.+|.|++|++.++..    ...+.  .|...|.+++|+ |++.+|++++.|+.|++|++....   ....
T Consensus        27 ~~~~~l~s~~~dg~v~vw~~~~~~~----~~~~~--~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~   99 (313)
T 3odt_A           27 VDDSKVASVSRDGTVRLWSKDDQWL----GTVVY--TGQGFLNSVCYD-SEKELLLFGGKDTMINGVPLFATSGEDPLYT   99 (313)
T ss_dssp             EETTEEEEEETTSEEEEEEESSSEE----EEEEE--ECSSCEEEEEEE-TTTTEEEEEETTSCEEEEETTCCTTSCC-CE
T ss_pred             cCCCEEEEEEcCCcEEEEECCCCEE----EEEee--cCCccEEEEEEC-CCCCEEEEecCCCeEEEEEeeecCCCCcccc
Confidence            3567899999999999999977653    12222  789999999999 799999999999999999987543   3333


Q ss_pred             eeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152          81 TDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        81 ~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                        ...|...|.++++++++|++++.++.|++|+  .++....+..|...+.+++|+| ++++|++++.++.|++||.  .
T Consensus       100 --~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~  173 (313)
T 3odt_A          100 --LIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--D  173 (313)
T ss_dssp             --ECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--T
T ss_pred             --hhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--C
Confidence              3578999999999999999999999999999  5556656778999999999999 9999999999999999993  4


Q ss_pred             eeeeeeec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         160 KNIFSAKN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      +....+.. +..                  .|.+++|+|++. |++++.++.|++||++   ...++..+..|...|+++
T Consensus       174 ~~~~~~~~~~~~------------------~i~~~~~~~~~~-~~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~i~~~  231 (313)
T 3odt_A          174 KVIKTFSGIHND------------------VVRHLAVVDDGH-FISCSNDGLIKLVDMH---TGDVLRTYEGHESFVYCI  231 (313)
T ss_dssp             EEEEEECSSCSS------------------CEEEEEEEETTE-EEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEE
T ss_pred             ceEEEEeccCcc------------------cEEEEEEcCCCe-EEEccCCCeEEEEECC---chhhhhhhhcCCceEEEE
Confidence            45555554 444                  799999999988 9999999999999999   788889999999999999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR  318 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~  318 (444)
                      +|+|++ .|++++.||.|++||+++ ++++..+..|...|++++|+|+++ +++++.||.|++|++.+++.+........
T Consensus       232 ~~~~~~-~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~~~~  308 (313)
T 3odt_A          232 KLLPNG-DIVSCGEDRTVRIWSKEN-GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDEIKGE  308 (313)
T ss_dssp             EECTTS-CEEEEETTSEEEEECTTT-CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-------
T ss_pred             EEecCC-CEEEEecCCEEEEEECCC-CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhhhhhh
Confidence            999999 588999999999999999 999999999999999999999998 66799999999999999887665544433

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=3.9e-39  Score=318.54  Aligned_cols=325  Identities=13%  Similarity=0.110  Sum_probs=266.8

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc---ceEEEeeeccC-CcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA---SVLALNWGNVE-ESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      ..|++++.+|.|++|++.+++.    +..+.  +|..   .|++++|+ |+ +.+|++++.|+.|++|++.+++.+..+.
T Consensus       174 ~~l~~~~~d~~v~vwd~~~~~~----~~~~~--~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  246 (615)
T 1pgu_A          174 MRSMTVGDDGSVVFYQGPPFKF----SASDR--THHKQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDGKSGEFLKYIE  246 (615)
T ss_dssp             CEEEEEETTTEEEEEETTTBEE----EEEEC--SSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred             cEEEEEeCCCcEEEEeCCCcce----eeeec--ccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEEEECCCCCEeEEec
Confidence            4799999999999999887764    22232  6888   99999999 78 9999999999999999999998877763


Q ss_pred             ec--cccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCcccccccc----CCCeEEEEEeccCCEEEEeeCCCeEEEEE
Q psy8152          83 VS--FGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNV----GPQLECMKHNKHSNIIATGGKENDLKLWD  155 (444)
Q Consensus        83 ~~--~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~vwd  155 (444)
                      ..  .|...|.++.+ ++++|++++.++.|++|++.+++.+..+..+    ...+.++.|. ++.++++++.++.|++||
T Consensus       247 ~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d  325 (615)
T 1pgu_A          247 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYE  325 (615)
T ss_dssp             BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred             ccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEE
Confidence            11  56777777644 8899999999999999999998877655544    3678888886 889999999999999999


Q ss_pred             cCCceeeeeeecccceeeEeeeCCC----------------------------------cc-------------cc----
Q psy8152         156 LNTTKNIFSAKNVSHRVLVYSVKPD----------------------------------EF-------------DL----  184 (444)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~-------------~~----  184 (444)
                      +.+++++..+..|...+..+.+ |+                                  ..             +.    
T Consensus       326 ~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~  404 (615)
T 1pgu_A          326 LGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE  404 (615)
T ss_dssp             TTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE
T ss_pred             CCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCc
Confidence            9998888888777666655555 32                                  00             00    


Q ss_pred             ---------------------------------------cCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCCCCccc
Q psy8152         185 ---------------------------------------RRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRP  224 (444)
Q Consensus       185 ---------------------------------------~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~  224 (444)
                                                             .+...+.+++|+  +++|++++. ++.|++|++.   ....
T Consensus       405 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~---~~~~  479 (615)
T 1pgu_A          405 FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLS---DLEV  479 (615)
T ss_dssp             CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETT---EEEE
T ss_pred             ccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECC---Cccc
Confidence                                                   112335555555  667778888 8888888888   4333


Q ss_pred             e-EEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecC----------CCCEEEE
Q psy8152         225 V-LKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPL----------NENLILS  292 (444)
Q Consensus       225 ~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~----------~~~~l~s  292 (444)
                      . ..+..|...|++++|+|++++|++++.||.|++|++.+ ++++..+.+ |...|++++|+|          ++++|++
T Consensus       480 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~  558 (615)
T 1pgu_A          480 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT  558 (615)
T ss_dssp             EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEE
T ss_pred             cccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEE
Confidence            3 55678899999999999999999999999999999999 999999988 999999999999          9999999


Q ss_pred             EECCCcEEEEEcCCC-ceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         293 VSLDRHFRVHDFHSK-KLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       293 ~~~dg~i~vw~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      ++.||.|++|++.++ +++..+. |...|++++|+++         +. +++++.|+.|++|++..
T Consensus       559 ~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~---------~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          559 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP---------ST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET---------TE-EEEEETTSCEEEEEEC-
T ss_pred             EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCC---------CC-eEEecCCceEEEEeeec
Confidence            999999999999997 6666654 8899999999854         56 99999999999999763

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.4e-39  Score=300.19  Aligned_cols=281  Identities=10%  Similarity=0.095  Sum_probs=225.4

Q ss_pred             ccceEEEeeeccCCcEEEEEEcC-------CeEEEEeCCCCccc--------cceeeccccccEEEEEeCCCeEEEEe--
Q psy8152          42 KASVLALNWGNVEESELLIAYSG-------QKIKIYDTDFKNFN--------TNTDVSFGEGDIVGVSRYDECILTAV--  104 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d-------~~i~vw~~~~~~~~--------~~~~~~~~~~~v~~~s~~~~~l~~~~--  104 (444)
                      ..+|++++|+ |++.+|++|+.+       +.|++|++......        ..+.+..|...+++++++++.+++++  
T Consensus        14 g~PV~sv~fs-~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~   92 (365)
T 4h5i_A           14 GYPAYGAKFL-NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNE   92 (365)
T ss_dssp             SSCEEEEEEE-ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCC
T ss_pred             CCCEEEEEEe-CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECC
Confidence            4689999999 799999998754       35999998755432        12334567788899999998888765  


Q ss_pred             ---------cCCcEEEEEcCCCCccc---------cccccCCCeEEEEEeccCCEEEE--eeCCCeEEEEEcCCceeeee
Q psy8152         105 ---------KSGDVKLWRYKTEPDQW---------TNFNVGPQLECMKHNKHSNIIAT--GGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus       105 ---------~dg~i~iw~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~vwd~~~~~~~~~  164 (444)
                               .++.+++|++.......         ....+...+.+++|+|+|++|++  ++.|++|+|||+.+++++..
T Consensus        93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~  172 (365)
T 4h5i_A           93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE  172 (365)
T ss_dssp             CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred             CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence                     46789999987654221         11224456899999999999765  44789999999999999888


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce--EEEeCCCCCeeEEEEcc
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV--LKVDIPDVALSCITTTN  242 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~i~~~~~~~  242 (444)
                      +. +..                  .|++++|+|++++|++++.+ .+++|+..   ....+  .....|...|.+++|+|
T Consensus       173 ~~-~~~------------------~V~~v~fspdg~~l~s~s~~-~~~~~~~~---~~~~~~~~~~~~~~~~v~~v~fsp  229 (365)
T 4h5i_A          173 IE-TRG------------------EVKDLHFSTDGKVVAYITGS-SLEVISTV---TGSCIARKTDFDKNWSLSKINFIA  229 (365)
T ss_dssp             EE-CSS------------------CCCEEEECTTSSEEEEECSS-CEEEEETT---TCCEEEEECCCCTTEEEEEEEEEE
T ss_pred             eC-CCC------------------ceEEEEEccCCceEEeccce-eEEEEEec---cCcceeeeecCCCCCCEEEEEEcC
Confidence            75 334                  59999999999999999865 55666665   33333  33456788899999999


Q ss_pred             CCCEEEEEcCCC----cEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         243 QSHYVIVGSTTG----DMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       243 ~~~~l~~~~~dg----~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +++++++++.++    .+++|++.. ...    ...+.+|...|++++|+|+|++||+|+.|++|+|||+.+++++..+.
T Consensus       230 dg~~l~~~s~d~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~  308 (365)
T 4h5i_A          230 DDTVLIAASLKKGKGIVLTKISIKS-GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK  308 (365)
T ss_dssp             TTEEEEEEEESSSCCEEEEEEEEET-TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET
T ss_pred             CCCEEEEEecCCcceeEEeeccccc-ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec
Confidence            999999998887    688899876 432    35567899999999999999999999999999999999999998863


Q ss_pred             --cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         315 --MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       315 --~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                        |..+|++++|+|         ++++|+|++.|++||||++..
T Consensus       309 ~gH~~~V~~v~fSp---------dg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          309 QAHSFAITEVTISP---------DSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             TSSSSCEEEEEECT---------TSCEEEEEETTSEEEEEECCT
T ss_pred             CcccCCEEEEEECC---------CCCEEEEEeCCCeEEEEEcCC
Confidence              899999999985         468999999999999999863

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=3.9e-40  Score=311.71  Aligned_cols=281  Identities=15%  Similarity=0.147  Sum_probs=219.9

Q ss_pred             CCCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           2 TLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         2 s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      ++.+++.||+|+.||.|+||++..+...    ..+...+|.+.|++|+|+|.++.+|++|+.||+|+|||+.++......
T Consensus       128 ~P~~~~~lasGs~dg~i~lWd~~~~~~~----~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~  203 (435)
T 4e54_B          128 HPTHPSTVAVGSKGGDIMLWNFGIKDKP----TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA  203 (435)
T ss_dssp             CSSCTTCEEEEETTSCEEEECSSCCSCC----EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred             eCCCCCEEEEEeCCCEEEEEECCCCCce----eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence            3456789999999999999999877631    222333899999999999547899999999999999999876554443


Q ss_pred             eeccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCC
Q psy8152          82 DVSFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNT  158 (444)
Q Consensus        82 ~~~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~  158 (444)
                      ..+.+...+  .+++|++.+|++|+.+|.|++||+... .+..+..|...|++++|+|++. +|++|+.|+.|++||+++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~  282 (435)
T 4e54_B          204 SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ  282 (435)
T ss_dssp             CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred             ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence            333333334  556889999999999999999999754 4556888999999999999664 788999999999999988


Q ss_pred             ceeeeee---ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC--
Q psy8152         159 TKNIFSA---KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV--  233 (444)
Q Consensus       159 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--  233 (444)
                      .+....+   ..|..                  .|++++|+|++++|++++.|+.|++||+.   .......+..|..  
T Consensus       283 ~~~~~~~~~~~~h~~------------------~v~~~~~spdg~~l~s~~~D~~i~iwd~~---~~~~~~~~~~~~~~~  341 (435)
T 4e54_B          283 VRGKASFLYSLPHRH------------------PVNAACFSPDGARLLTTDQKSEIRVYSAS---QWDCPLGLIPHPHRH  341 (435)
T ss_dssp             CCSSSCCSBCCBCSS------------------CEEECCBCTTSSEEEEEESSSCEEEEESS---SSSSEEEECCCCCCC
T ss_pred             ccccceEEEeeeccc------------------cccceeECCCCCeeEEEcCCCEEEEEECC---CCccceEEecccccc
Confidence            6544332   33444                  79999999999999999999999999999   6666666655532  


Q ss_pred             ----CeeEEEEccCCCEEEEEc------------CCCcEEEEEcCCCCcceeEec-cccCceeEE-EecCCCCEEEEEEC
Q psy8152         234 ----ALSCITTTNQSHYVIVGS------------TTGDMMAVDLRGKGKPCYKYK-GFAGCVKDI-ACPLNENLILSVSL  295 (444)
Q Consensus       234 ----~i~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~-~~s~~~~~l~s~~~  295 (444)
                          .+..+.|+|++.++++++            .++.|++||..+ ++++..+. +|...|.++ +|+|+|++|++|+ 
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~-g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-  419 (435)
T 4e54_B          342 FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS-GKMMCQLYDPESSGISSLNEFNPMGDTLASAM-  419 (435)
T ss_dssp             CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS-CCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-
T ss_pred             cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC-CcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-
Confidence                234567788777777664            335799999999 99888875 688889887 6999999999876 


Q ss_pred             CCcEEEEEcCCCceE
Q psy8152         296 DRHFRVHDFHSKKLL  310 (444)
Q Consensus       296 dg~i~vw~~~~~~~~  310 (444)
                      |+.|+||++.+++..
T Consensus       420 d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          420 GYHILIWSQQEARTR  434 (435)
T ss_dssp             SSEEEECCCC-----
T ss_pred             CCcEEEEECCcCeee
Confidence            889999999988763

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-40  Score=310.78  Aligned_cols=290  Identities=13%  Similarity=0.201  Sum_probs=245.5

Q ss_pred             CcccceEEEeeeccCCc-EEEEE----------EcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecC
Q psy8152          40 TNKASVLALNWGNVEES-ELLIA----------YSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKS  106 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~-~l~~~----------~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~d  106 (444)
                      .+...|.+++|+ |++. +|++|          +.|+.|+||++.++.....+....|...|.++  +|++++|++++.+
T Consensus        10 ~~~~~v~~~~~s-p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d   88 (416)
T 2pm9_A           10 AEFSRTATFAWS-HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN   88 (416)
T ss_dssp             CEEEESCBCCBC-SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS
T ss_pred             hhhhhcceEeeC-CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC
Confidence            345678999999 6776 89999          88999999999987643222223566677655  6889999999999


Q ss_pred             CcEEEEEcCC----CCccccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCce------eeeee---eccccee
Q psy8152         107 GDVKLWRYKT----EPDQWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTK------NIFSA---KNVSHRV  172 (444)
Q Consensus       107 g~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~------~~~~~---~~~~~~~  172 (444)
                      |.|++|++.+    .+.+..+..|...|.+++|+|+ +++|++++.|+.|++||+.+++      ....+   ..+..  
T Consensus        89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--  166 (416)
T 2pm9_A           89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD--  166 (416)
T ss_dssp             SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC--
T ss_pred             CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC--
Confidence            9999999987    3456567789999999999997 8999999999999999999876      33222   23333  


Q ss_pred             eEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------CCCeeEEEEccCC-
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------DVALSCITTTNQS-  244 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~-  244 (444)
                                      .|++++|+|+ +.+|++++.|+.|++||++   ....+..+..+      ...|.+++|+|++ 
T Consensus       167 ----------------~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  227 (416)
T 2pm9_A          167 ----------------EVISLAWNQSLAHVFASAGSSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS  227 (416)
T ss_dssp             ----------------CCCEEEECSSCTTEEEEESSSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEEECSSCT
T ss_pred             ----------------CeeEEEeCCCCCcEEEEEcCCCCEEEEECC---CCCcceEEeccccccccCCceEEEEECCCCC
Confidence                            7999999999 6899999999999999999   77778877766      7889999999997 


Q ss_pred             CEEEEEcCCC---cEEEEEcCCCCcceeEec-cccCceeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEee-cCCc
Q psy8152         245 HYVIVGSTTG---DMMAVDLRGKGKPCYKYK-GFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSR  318 (444)
Q Consensus       245 ~~l~~~~~dg---~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~  318 (444)
                      .+|++++.++   .|++||+++...++..+. +|...|++++|+| ++++|++++.|+.|++|++.+++++..+. |...
T Consensus       228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~  307 (416)
T 2pm9_A          228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW  307 (416)
T ss_dssp             TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC
T ss_pred             CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc
Confidence            6899999998   999999998237788888 8999999999999 89999999999999999999999988876 7889


Q ss_pred             eeEEEEcCCCcccccchhh-hhccccccCCCccccCCCccccc
Q psy8152         319 LTSILVRSDFSLENETKKE-EQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       319 i~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      |.+++|+++         + .++++++.|+.|++|++......
T Consensus       308 v~~~~~s~~---------~~~~l~s~~~d~~i~iw~~~~~~~~  341 (416)
T 2pm9_A          308 CFKTKFAPE---------APDLFACASFDNKIEVQTLQNLTNT  341 (416)
T ss_dssp             CCCEEECTT---------CTTEEEECCSSSEEEEEESCCCCCS
T ss_pred             eEEEEECCC---------CCCEEEEEecCCcEEEEEccCCCCC
Confidence            999999865         3 68999999999999999876543

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-38  Score=294.85  Aligned_cols=274  Identities=11%  Similarity=0.130  Sum_probs=240.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      .++.+|++|+.+|.|++|++.+++.    +..+.  +|...|++++|+ |++++|++++.||.|++|++.+++.+..+. 
T Consensus        42 ~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~--~h~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-  113 (369)
T 3zwl_B           42 KEGDLLFSCSKDSSASVWYSLNGER----LGTLD--GHTGTIWSIDVD-CFTKYCVTGSADYSIKLWDVSNGQCVATWK-  113 (369)
T ss_dssp             TTSCEEEEEESSSCEEEEETTTCCE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEE-
T ss_pred             CCCCEEEEEeCCCEEEEEeCCCchh----hhhhh--hcCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEee-
Confidence            3668999999999999999988764    22233  799999999999 799999999999999999999999888875 


Q ss_pred             ccccccEE--EEEeCCCeEEEEecC-----CcEEEEEcCCCCcc-----------ccccccCC--CeEEEEEeccCCEEE
Q psy8152          84 SFGEGDIV--GVSRYDECILTAVKS-----GDVKLWRYKTEPDQ-----------WTNFNVGP--QLECMKHNKHSNIIA  143 (444)
Q Consensus        84 ~~~~~~v~--~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~-----------~~~~~~~~--~v~~~~~~~~~~~l~  143 (444)
                        +...+.  +++|++++|++++.+     +.|++|++......           ..+..|..  .+.+++|+|++++|+
T Consensus       114 --~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  191 (369)
T 3zwl_B          114 --SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII  191 (369)
T ss_dssp             --CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred             --cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence              344554  557899999999998     99999998876432           23344555  899999999999999


Q ss_pred             EeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc
Q psy8152         144 TGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR  222 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  222 (444)
                      +++.+|.|++||+++ .+.+..+..+..                  .|.+++|+|++++|++++.|+.|++||++   ..
T Consensus       192 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~d~~i~v~d~~---~~  250 (369)
T 3zwl_B          192 AGHKDGKISKYDVSNNYEYVDSIDLHEK------------------SISDMQFSPDLTYFITSSRDTNSFLVDVS---TL  250 (369)
T ss_dssp             EEETTSEEEEEETTTTTEEEEEEECCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT---TC
T ss_pred             EEcCCCEEEEEECCCCcEeEEEEecCCC------------------ceeEEEECCCCCEEEEecCCceEEEEECC---CC
Confidence            999999999999998 778888877776                  79999999999999999999999999999   67


Q ss_pred             cceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--------------cEEEEEcCCCCcceeEeccccCceeEEEecCCCC
Q psy8152         223 RPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--------------DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN  288 (444)
Q Consensus       223 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~  288 (444)
                      ..+..+. +...+.+++|+|+++++++++.++              .+++||+.+ ++++..+.+|...|++++|+|+++
T Consensus       251 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~  328 (369)
T 3zwl_B          251 QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPLNTVAISPQGT  328 (369)
T ss_dssp             CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSS
T ss_pred             ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcEEEEEECCCCC
Confidence            7777776 677899999999999999999888              899999999 999999999999999999999999


Q ss_pred             EEEEEECCCcEEEEEcCCCceE
Q psy8152         289 LILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       289 ~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                      +|++++.||.|++|++..+...
T Consensus       329 ~l~s~~~dg~v~iw~~~~~~~~  350 (369)
T 3zwl_B          329 SYASGGEDGFIRLHHFEKSYFD  350 (369)
T ss_dssp             EEEEEETTSEEEEEEECHHHHT
T ss_pred             EEEEEcCCCeEEEEECccccch
Confidence            9999999999999999876543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=9.3e-39  Score=286.41  Aligned_cols=244  Identities=10%  Similarity=0.115  Sum_probs=203.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--ccccceeeccccccEEEEE--e--CCCeEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--NFNTNTDVSFGEGDIVGVS--R--YDECILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~s--~--~~~~l~~~~~dg~i~iw~  113 (444)
                      +|...|++++|+ |++++|++|+.|++|+||++...  +.+..+  .+|..+|.++.  +  ++++|++|+.|++|++|+
T Consensus         7 ~h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~l--~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            7 AHNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             SCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEEE--CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             CCcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEEE--ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            899999999999 79999999999999999999754  444444  58888998775  3  378999999999999999


Q ss_pred             cCCCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCcee--eeeeecccceeeEeeeCCCcccccCc
Q psy8152         114 YKTEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTKN--IFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       114 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      +.+++  .+..+..|...|.+++|+|+  +.+|++++.|+.|++||++.+..  ...+..|..                 
T Consensus        84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-----------------  146 (297)
T 2pm7_B           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-----------------  146 (297)
T ss_dssp             BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-----------------
T ss_pred             cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-----------------
Confidence            98874  33345679999999999996  89999999999999999987532  344555555                 


Q ss_pred             cceeEEEEecC-------------CCEEEEEeCCceEEEEEcCCCCC--ccceEEEeCCCCCeeEEEEccCC---CEEEE
Q psy8152         188 VWVNGISFLPN-------------SDKVAVCSKQGYVRVYDPKITTQ--RRPVLKVDIPDVALSCITTTNQS---HYVIV  249 (444)
Q Consensus       188 ~~i~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~---~~l~~  249 (444)
                       .|++++|+|+             +++|++|+.|++|++||++ ...  ......+.+|...|.+++|+|++   .+|++
T Consensus       147 -~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~-~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las  224 (297)
T 2pm7_B          147 -GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN-SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS  224 (297)
T ss_dssp             -CEEEEEECCCC------------CCEEEEEETTSCEEEEEEE-TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred             -ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc-CCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence             6888888886             4799999999999999998 111  12556788999999999999984   89999


Q ss_pred             EcCCCcEEEEEcCCCCc---ceeEe--ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         250 GSTTGDMMAVDLRGKGK---PCYKY--KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~---~~~~~--~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++.|++|+|||+.. ..   ....+  ..|...|.+++|+|++++|++++.|+.|+||+...
T Consensus       225 ~s~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          225 VSQDRTCIIWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             EETTSCEEEEEESS-TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             EECCCcEEEEEeCC-CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence            99999999999986 43   12233  46788999999999999999999999999999863

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=5.8e-39  Score=297.31  Aligned_cols=279  Identities=13%  Similarity=0.188  Sum_probs=234.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.+|.|++|++.+++.  ..+..+.  +|...|++++|+ |++.+|++++.|+.|++|++.+++....+..
T Consensus        18 ~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~--~h~~~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~   92 (372)
T 1k8k_C           18 KDRTQIAICPNNHEVHIYEKSGNKW--VQVHELK--EHNGQVTGVDWA-PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI   92 (372)
T ss_dssp             TTSSEEEEECSSSEEEEEEEETTEE--EEEEEEE--CCSSCEEEEEEE-TTTTEEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred             CCCCEEEEEeCCCEEEEEeCCCCcE--Eeeeeec--CCCCcccEEEEe-CCCCEEEEEcCCCeEEEEECCCCeeeeeEEe
Confidence            4668899999999999999988751  1123333  799999999999 7999999999999999999988876666655


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc----cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD----QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      ..|...|.++  +|++++|++++.++.|++|++..+..    ......|...|.+++|+|++++|++++.|+.|++||++
T Consensus        93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~  172 (372)
T 1k8k_C           93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY  172 (372)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred             ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence            5677777665  67899999999999999999998763    22335689999999999999999999999999999964


Q ss_pred             ------------------CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC
Q psy8152         158 ------------------TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT  219 (444)
Q Consensus       158 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  219 (444)
                                        .++.+..+..+..                  .|++++|+|++++|++++.|+.|++||++  
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--  232 (372)
T 1k8k_C          173 IKEVEERPAPTPWGSKMPFGELMFESSSSCG------------------WVHGVCFSANGSRVAWVSHDSTVCLADAD--  232 (372)
T ss_dssp             CTTTSCCCCCBTTBSCCCTTCEEEECCCCSS------------------CEEEEEECSSSSEEEEEETTTEEEEEEGG--
T ss_pred             cccccccccccccccccchhhheEecCCCCC------------------eEEEEEECCCCCEEEEEeCCCEEEEEECC--
Confidence                              4666666666655                  79999999999999999999999999999  


Q ss_pred             CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc---------------------------------
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK---------------------------------  266 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---------------------------------  266 (444)
                       ...++..+..|..+|.+++|+|++++|++| .++.|++|++..+..                                 
T Consensus       233 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (372)
T 1k8k_C          233 -KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS  310 (372)
T ss_dssp             -GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred             -CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence             778888999999999999999999988888 899999999875101                                 


Q ss_pred             ce------eEe-ccccCceeEEEec-CCC---CEEEEEECCCcEEEEEcCCCce
Q psy8152         267 PC------YKY-KGFAGCVKDIACP-LNE---NLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       267 ~~------~~~-~~h~~~i~~~~~s-~~~---~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      ..      ..+ .+|..+|++++|+ +++   ++|++++.||.|++|++.+++.
T Consensus       311 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~  364 (372)
T 1k8k_C          311 SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES  364 (372)
T ss_dssp             --------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred             cccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence            10      333 3899999999966 666   8999999999999999977543

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=6.4e-39  Score=321.14  Aligned_cols=274  Identities=14%  Similarity=0.149  Sum_probs=228.6

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCcccee-eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIK-NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      +.+..+|++|+.||.|++|++........ ....+.  +|...|++++|+ |++++|++|+.|++|+|||+.++.....+
T Consensus       392 ~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~--~h~~~v~~v~~s-~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~  468 (694)
T 3dm0_A          392 IDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT--GHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLAAGVSTRRF  468 (694)
T ss_dssp             TTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             CCCCCEEEEEeCCCcEEEEEccCCCcccccccceec--CCCCcEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCcceeEE
Confidence            34457899999999999999976543111 111222  899999999999 79999999999999999999999888777


Q ss_pred             eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc---cccccCCCeEEEEEeccC--CEEEEeeCCCeEEEE
Q psy8152          82 DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNKHS--NIIATGGKENDLKLW  154 (444)
Q Consensus        82 ~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~vw  154 (444)
                      .  +|...|.++  +|++++|++++.|++|++|++.......   ...+|...|.+++|+|++  ..|++++.|+.|++|
T Consensus       469 ~--~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw  546 (694)
T 3dm0_A          469 V--GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW  546 (694)
T ss_dssp             E--CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred             e--CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence            5  677777665  6889999999999999999986543322   124688899999999965  689999999999999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA  234 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~  234 (444)
                      |+++++....+.+|..                  .|++++|+|++++|++|+.|++|++||++   ..+.+..+.. ...
T Consensus       547 d~~~~~~~~~~~~h~~------------------~v~~v~~spdg~~l~sg~~Dg~i~iwd~~---~~~~~~~~~~-~~~  604 (694)
T 3dm0_A          547 NLSNCKLRSTLAGHTG------------------YVSTVAVSPDGSLCASGGKDGVVLLWDLA---EGKKLYSLEA-NSV  604 (694)
T ss_dssp             ETTTCCEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSBCEEEETT---TTEEEECCBC-SSC
T ss_pred             ECCCCcEEEEEcCCCC------------------CEEEEEEeCCCCEEEEEeCCCeEEEEECC---CCceEEEecC-CCc
Confidence            9999999888888877                  89999999999999999999999999999   6777776654 457


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-------------------CceeEEEecCCCCEEEEEEC
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------------GCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------------~~i~~~~~s~~~~~l~s~~~  295 (444)
                      |.+++|+|++.+|++++ ++.|+|||+++ +..+..+..+.                   ..+++++|+|++++|++|+.
T Consensus       605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~  682 (694)
T 3dm0_A          605 IHALCFSPNRYWLCAAT-EHGIKIWDLES-KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT  682 (694)
T ss_dssp             EEEEEECSSSSEEEEEE-TTEEEEEETTT-TEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred             EEEEEEcCCCcEEEEEc-CCCEEEEECCC-CCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence            99999999998887765 56699999999 88877765321                   13788999999999999999


Q ss_pred             CCcEEEEEcC
Q psy8152         296 DRHFRVHDFH  305 (444)
Q Consensus       296 dg~i~vw~~~  305 (444)
                      ||+|+||++.
T Consensus       683 Dg~i~iW~i~  692 (694)
T 3dm0_A          683 DGVIRVWGIG  692 (694)
T ss_dssp             TSEEEEEEC-
T ss_pred             CCeEEEEecc
Confidence            9999999985

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.5e-40  Score=310.67  Aligned_cols=283  Identities=11%  Similarity=0.099  Sum_probs=233.6

Q ss_pred             CcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCC---CccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDF---KNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~---~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~  113 (444)
                      +|.+.|++++|+ | ++.+|++|+.||+|+||++.+   +..........|...|.++  +|++++|++++.||.|++|+
T Consensus        61 ~h~~~V~~~~~s-~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd  139 (437)
T 3gre_A           61 NEPNSITSSAVS-PGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK  139 (437)
T ss_dssp             TTTSCEEEEEEE-CSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCCCceEEEEEC-CCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence            789999999999 7 899999999999999999876   4422211212577778766  57889999999999999999


Q ss_pred             cC---CCCcccccc----------c--cCCCeEEEE--EeccCCEEEEeeCCCeEEEEEcCCceeeeeeec--ccceeeE
Q psy8152         114 YK---TEPDQWTNF----------N--VGPQLECMK--HNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN--VSHRVLV  174 (444)
Q Consensus       114 ~~---~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~  174 (444)
                      +.   +++......          .  +...+.++.  +++++.+|++|+.|+.|++||+++++++..+..  |..    
T Consensus       140 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~----  215 (437)
T 3gre_A          140 VNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG----  215 (437)
T ss_dssp             EEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC----
T ss_pred             eccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC----
Confidence            94   454433111          1  556677777  456899999999999999999999999988887  445    


Q ss_pred             eeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEcc----CCCEEEE
Q psy8152         175 YSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTN----QSHYVIV  249 (444)
Q Consensus       175 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~----~~~~l~~  249 (444)
                                    .|++++|+|++++|++|+.||.|++||++   ...++..+. .|..+|++++|+|    ++.+|++
T Consensus       216 --------------~v~~~~~s~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s  278 (437)
T 3gre_A          216 --------------AVSSICIDEECCVLILGTTRGIIDIWDIR---FNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG  278 (437)
T ss_dssp             --------------CEEEEEECTTSCEEEEEETTSCEEEEETT---TTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred             --------------ceEEEEECCCCCEEEEEcCCCeEEEEEcC---CccEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence                          79999999999999999999999999999   778888776 7778999996665    5789999


Q ss_pred             EcCCCcEEEEEcCCCCcceeEecc--------------------------ccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKG--------------------------FAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~--------------------------h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      |+.||.|++||+++ ++++..+.+                          |...|++++|+ ++++|++++.|+.|++|+
T Consensus       279 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd  356 (437)
T 3gre_A          279 GSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFS  356 (437)
T ss_dssp             ESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEE
T ss_pred             EcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEE
Confidence            99999999999998 887776664                          45568888998 678999999999999999


Q ss_pred             cCCCceEEEee--------------------------------------cCCceeEEEEcCCCcccccchhhhhcccccc
Q psy8152         304 FHSKKLLRKDY--------------------------------------MQSRLTSILVRSDFSLENETKKEEQEHSEEK  345 (444)
Q Consensus       304 ~~~~~~~~~~~--------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~  345 (444)
                      +.+++++..+.                                      |...|++++|.+.       +...++++++.
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~-------~~~~~l~s~~~  429 (437)
T 3gre_A          357 LNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV-------DETPLLVACDN  429 (437)
T ss_dssp             TTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES-------SSSEEEEEEET
T ss_pred             CCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc-------CCceEEEEEcC
Confidence            99988766554                                      6778899988765       33578999999


Q ss_pred             CCCccccC
Q psy8152         346 GDSDEKYD  353 (444)
Q Consensus       346 d~~i~~W~  353 (444)
                      ||.|+||+
T Consensus       430 dG~I~iw~  437 (437)
T 3gre_A          430 SGLIGIFQ  437 (437)
T ss_dssp             TSCEEEEC
T ss_pred             CceEEEeC
Confidence            99999995

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=7.9e-39  Score=297.82  Aligned_cols=268  Identities=13%  Similarity=0.120  Sum_probs=216.4

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee-ecc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD-VSF   85 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-~~~   85 (444)
                      .+|++|+.||.|++|++.+++..    ..+...+|...|++++|+|.++.+|++++.|+.|++|++.+. ....+. ...
T Consensus        87 ~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~  161 (383)
T 3ei3_B           87 TTVAVGSKGGDIILWDYDVQNKT----SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDS  161 (383)
T ss_dssp             TEEEEEEBTSCEEEEETTSTTCE----EEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCC
T ss_pred             CEEEEEcCCCeEEEEeCCCcccc----eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCC
Confidence            79999999999999999987741    222223799999999999327899999999999999999863 333333 223


Q ss_pred             ccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCC----
Q psy8152          86 GEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNT----  158 (444)
Q Consensus        86 ~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~----  158 (444)
                      +...|.+  ++|++++|++++.++.|++||+ +++.+..+..|...|.+++|+|++. +|++++.|+.|++||+++    
T Consensus       162 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  240 (383)
T 3ei3_B          162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK  240 (383)
T ss_dssp             SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred             CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence            3455554  5789999999999999999999 4666667888999999999999888 999999999999999998    


Q ss_pred             ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------
Q psy8152         159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------  231 (444)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------  231 (444)
                      +.++..+ .+..                  .|++++|+| ++++|++++.|+.|++||++   .......+..|      
T Consensus       241 ~~~~~~~-~~~~------------------~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~  298 (383)
T 3ei3_B          241 NSYIAEM-PHEK------------------PVNAAYFNPTDSTKLLTTDQRNEIRVYSSY---DWSKPDQIIIHPHRQFQ  298 (383)
T ss_dssp             TCEEEEE-ECSS------------------CEEEEEECTTTSCEEEEEESSSEEEEEETT---BTTSCSEEEECCBCCCT
T ss_pred             cceEEEe-cCCC------------------ceEEEEEcCCCCCEEEEEcCCCcEEEEECC---CCccccccccccccccc
Confidence            5555555 4444                  799999999 99999999999999999999   54444444433      


Q ss_pred             -CC----------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--ccCceeEEEecCCCCEEEEEECCCc
Q psy8152         232 -DV----------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--FAGCVKDIACPLNENLILSVSLDRH  298 (444)
Q Consensus       232 -~~----------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg~  298 (444)
                       ..          .+..++|+|++++  +++.|+.|++||+.+ ++++..+.+  |...+..++|+|++++|++++ |+.
T Consensus       299 ~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~-~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~  374 (383)
T 3ei3_B          299 HLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS-GGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN  374 (383)
T ss_dssp             TSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTT-CCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred             cccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCC-CceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence             22          2334556666655  677899999999999 999999986  567788889999999999997 999


Q ss_pred             EEEEEcCC
Q psy8152         299 FRVHDFHS  306 (444)
Q Consensus       299 i~vw~~~~  306 (444)
                      |+||++.+
T Consensus       375 i~iw~~~~  382 (383)
T 3ei3_B          375 ILIWNRED  382 (383)
T ss_dssp             EEEEECC-
T ss_pred             EEEEecCC
Confidence            99999864

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=286.61  Aligned_cols=272  Identities=11%  Similarity=0.114  Sum_probs=228.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      ++.|++| .|++|+|||+.+++.    ++.+...+|...|++++|+ |++++|++|+.||+|++|++.+++.+..+.  +
T Consensus        36 ~~~lAvg-~D~tV~iWd~~tg~~----~~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~--~  107 (318)
T 4ggc_A           36 GNVLAVA-LDNSVYLWSASSGDI----LQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT--S  107 (318)
T ss_dssp             TSEEEEE-ETTEEEEEETTTCCE----EEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE--C
T ss_pred             CCEEEEE-eCCEEEEEECCCCCE----EEEEEecCCCCeEEEEEEC-CCCCEEEEEECCCcEEEeecCCceeEEEec--C
Confidence            3466665 599999999999875    2333333789999999999 799999999999999999999999888775  7


Q ss_pred             ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee--
Q psy8152          86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI--  162 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--  162 (444)
                      |...+.++++++.++++++.++.+++|+...... +..+..|...+.++.+++++++|++++.|+.|++||+++++..  
T Consensus       108 h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~  187 (318)
T 4ggc_A          108 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV  187 (318)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC
T ss_pred             ccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc
Confidence            8899999999999999999999999999877644 3456779999999999999999999999999999999886532  


Q ss_pred             --eeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EE--EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         163 --FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KV--AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       163 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                        .....+..                  .|.+++++|.+. .+  ++++.+++|++|+..   ....... ..+...+..
T Consensus       188 ~~~~~~~~~~------------------~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~---~~~~~~~-~~~~~~v~~  245 (318)
T 4ggc_A          188 PLQTFTQHQG------------------AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC---SGACLSA-VDAHSQVCS  245 (318)
T ss_dssp             CSEEECCCCS------------------CEEEEEECTTSTTEEEEEECTTTCEEEEEETT---TCCEEEE-EECSSCEEE
T ss_pred             ceeeecccCC------------------ceEEEEecCCCCcEEEEEecCCCCEEEEEecc---ccccccc-ccceeeeee
Confidence              22222233                  689999999874 33  466789999999998   4444443 346677999


Q ss_pred             EEEccCCCEEEEE--cCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         238 ITTTNQSHYVIVG--STTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       238 ~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      +.|+|.+..++++  +.|+.|+|||+++ ++++.++.+|.+.|++++|+|++++|+||+.||+|+|||+....
T Consensus       246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          246 ILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             EEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             eeecccccceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            9999999888764  4799999999999 99999999999999999999999999999999999999997643

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.8e-39  Score=298.97  Aligned_cols=288  Identities=10%  Similarity=0.152  Sum_probs=235.7

Q ss_pred             CcccceEEEeeeccCCcEE-EEEEc---CCeEEEEeCCCCccccceeeccccccEEEE--EeC---CCeEEEEecCCcEE
Q psy8152          40 TNKASVLALNWGNVEESEL-LIAYS---GQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRY---DECILTAVKSGDVK  110 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l-~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~---~~~l~~~~~dg~i~  110 (444)
                      +|...|++++|+ |++..| ++|+.   |+.|+||++.+++....... .|...|.++  +|+   +.+|++++.+|.|+
T Consensus        16 ~h~~~v~~~~~~-p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~   93 (357)
T 3i2n_A           16 GFNYTVFDCKWV-PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLATGDFGGNLH   93 (357)
T ss_dssp             ECSSCEEEEEEC-TTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred             CCCCceEEEEEc-CCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence            799999999999 677554 56665   89999999998887655432 667778776  455   68999999999999


Q ss_pred             EEEcCCCC-ccccccccCCCeEEEEE------eccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcc
Q psy8152         111 LWRYKTEP-DQWTNFNVGPQLECMKH------NKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       111 iw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      +|++.+++ .+..+..|...|.+++|      +|++++|++++.|+.|++||+.+++ ++..+..+..            
T Consensus        94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------------  161 (357)
T 3i2n_A           94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG------------  161 (357)
T ss_dssp             EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT------------
T ss_pred             EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC------------
Confidence            99999887 67677889999999965      6789999999999999999999876 5666554332            


Q ss_pred             cccCccceeEEE----EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc---CCCEEEEEcCCCc
Q psy8152         183 DLRRPVWVNGIS----FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN---QSHYVIVGSTTGD  255 (444)
Q Consensus       183 ~~~~~~~i~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~  255 (444)
                        .....|.+++    |+|++++|++++.++.|++||++   ...... ...|...|.+++|+|   ++.+|++++.+|.
T Consensus       162 --~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~  235 (357)
T 3i2n_A          162 --ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR---NMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGK  235 (357)
T ss_dssp             --SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT---TTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred             --CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc---cCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence              0122578888    77899999999999999999999   555443 456788999999999   8999999999999


Q ss_pred             EEEEEcCCCCcceeEec-----cccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCc-------------------eE
Q psy8152         256 MMAVDLRGKGKPCYKYK-----GFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKK-------------------LL  310 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~~-----~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~-------------------~~  310 (444)
                      |++||+++ ++++..+.     +|...|++++|+|+++ +|++++.||.|++|++..+.                   ++
T Consensus       236 i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~  314 (357)
T 3i2n_A          236 FHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL  314 (357)
T ss_dssp             EEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred             EEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence            99999998 77776665     8999999999999998 89999999999999997642                   34


Q ss_pred             EEee-cCCceeEEEEcCCCcccccchhhhhcc-ccccCCCccccCCCcc
Q psy8152         311 RKDY-MQSRLTSILVRSDFSLENETKKEEQEH-SEEKGDSDEKYDPEHF  357 (444)
Q Consensus       311 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~i~~W~~~~~  357 (444)
                      ..+. |...|.+++|+++         +.+++ +++.|+.|++|++...
T Consensus       315 ~~~~~~~~~v~~~~~s~~---------~~~l~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          315 QNVTLSTQPISSLDWSPD---------KRGLCVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             EEEECCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEECC-
T ss_pred             eccccCCCCeeEEEEcCC---------CCeEEEEecCCCcEEEEECCCc
Confidence            4443 8889999999855         56777 8999999999998754

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=4.7e-38  Score=335.00  Aligned_cols=337  Identities=15%  Similarity=0.159  Sum_probs=286.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      +++.+|++|+.||.|++|++.+++.    +..+.  +|...|.+++|+|. +..++++|+.|+.|++||+.++++...+.
T Consensus       667 ~~~~~l~s~~~d~~v~vwd~~~~~~----~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~  740 (1249)
T 3sfz_A          667 SDDSYIATCSADKKVKIWDSATGKL----VHTYD--EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF  740 (1249)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTCCE----EEEEE--CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred             cCCCEEEEEeCCCeEEEEECCCCce----EEEEc--CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence            4568999999999999999998874    22233  79999999999932 45689999999999999999999887775


Q ss_pred             eccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCcccc--------------------------------------
Q psy8152          83 VSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWT--------------------------------------  122 (444)
Q Consensus        83 ~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------------------------------------  122 (444)
                        +|...|.+  ++|++++|++++.||.|++|++.+++....                                      
T Consensus       741 --~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~  818 (1249)
T 3sfz_A          741 --GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK  818 (1249)
T ss_dssp             --CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred             --CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence              66777765  478999999999999999999876532211                                      


Q ss_pred             -----------------ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc---
Q psy8152         123 -----------------NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF---  182 (444)
Q Consensus       123 -----------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---  182 (444)
                                       ...|...|.+++|+|++.++++++.++.|++|++.++..+..+.+|...+..+.++|++.   
T Consensus       819 ~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~  898 (1249)
T 3sfz_A          819 NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL  898 (1249)
T ss_dssp             TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE
Confidence                             115778899999999999999999999999999999999999999999899999988742   


Q ss_pred             ----cc------------------------------------------------------cCccceeEEEEecCCCEEEE
Q psy8152         183 ----DL------------------------------------------------------RRPVWVNGISFLPNSDKVAV  204 (444)
Q Consensus       183 ----~~------------------------------------------------------~~~~~i~~~~~~~~~~~l~~  204 (444)
                          +.                                                      .....+.+++|+|+++++++
T Consensus       899 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~  978 (1249)
T 3sfz_A          899 TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAF  978 (1249)
T ss_dssp             EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEE
T ss_pred             EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEE
Confidence                00                                                      01235889999999999999


Q ss_pred             EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152         205 CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       205 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s  284 (444)
                      |+.+|.|++|++.   ....+..+.+|...|++++|+|++++|++++.||.|++|++.+ +..+. +..|...|.+++|+
T Consensus       979 g~~~g~i~i~d~~---~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~-~~~~~-~~~~~~~v~~~~~~ 1053 (1249)
T 3sfz_A          979 GDEDGAIKIIELP---NNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT-GDYVF-LQAHQETVKDFRLL 1053 (1249)
T ss_dssp             EETTSCCEEEETT---TTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT-TEEEC-CBCCSSCEEEEEEC
T ss_pred             EcCCCCEEEEEcC---CCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CceEE-EecCCCcEEEEEEc
Confidence            9999999999999   7778888889999999999999999999999999999999998 76664 55799999999999


Q ss_pred             CCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         285 LNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       285 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      |++ .+++++.||.|++|++.+++++..+. |...|.+++|+++         +.++++++.|++|++|++..+......
T Consensus      1054 ~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d---------~~~l~s~s~d~~v~iwd~~~~~~~~~l 1123 (1249)
T 3sfz_A         1054 QDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD---------ATKFSSTSADKTAKIWSFDLLSPLHEL 1123 (1249)
T ss_dssp             SSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSS---------SSSCEEECCSSCCCEECSSSSSCSBCC
T ss_pred             CCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCC---------CCEEEEEcCCCcEEEEECCCcceeeee
Confidence            965 67889999999999999999888876 8889999998854         578999999999999999876654433

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3.1e-38  Score=298.82  Aligned_cols=279  Identities=15%  Similarity=0.219  Sum_probs=232.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++.+|++|+.+|.|++|++.+++.    ...+.  +|...|++++|.   +++|++|+.||.|++|++.+++.+..+.  
T Consensus       142 d~~~l~~g~~dg~i~iwd~~~~~~----~~~~~--~h~~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~--  210 (435)
T 1p22_A          142 DDQKIVSGLRDNTIKIWDKNTLEC----KRILT--GHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLI--  210 (435)
T ss_dssp             CSSEEEEEESSSCEEEEESSSCCE----EEEEC--CCSSCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEEC--
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCeE----EEEEc--CCCCcEEEEEEC---CCEEEEEcCCCeEEEEECCCCcEEEEEc--
Confidence            567899999999999999988774    12222  799999999995   7899999999999999999999887775  


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc---ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ---WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      +|...|.++.+++.+|++|+.||.|++||+.++...   ..+.+|...|.+++|  ++++|++|+.||.|++||+++++.
T Consensus       211 ~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~  288 (435)
T 1p22_A          211 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF  288 (435)
T ss_dssp             CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred             CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence            778999999999999999999999999999988765   456779999999999  788999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+..|..                  .|.+++|+  +.+|++|+.||.|++||++   ...++..+.+|...|.+++| 
T Consensus       289 ~~~~~~~~~------------------~v~~~~~~--~~~l~~g~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~~~~-  344 (435)
T 1p22_A          289 VRTLNGHKR------------------GIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRVLEGHEELVRCIRF-  344 (435)
T ss_dssp             EEEEECCSS------------------CEEEEEEE--TTEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEC-
T ss_pred             EEEEcCCCC------------------cEEEEEeC--CCEEEEEeCCCeEEEEECC---CCCEEEEEeCCcCcEEEEEe-
Confidence            999888777                  79999984  5899999999999999999   78889999999999999999 


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCc---------ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGK---------PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                       ++.+|++|+.||.|++||+.. +.         ++..+.+|.+.|++++|  ++.+|++++.||.|++|++.+......
T Consensus       345 -~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~  420 (435)
T 1p22_A          345 -DNKRIVSGAYDGKIKVWDLVA-ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA  420 (435)
T ss_dssp             -CSSEEEEEETTSCEEEEEHHH-HTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred             -cCCEEEEEeCCCcEEEEECCC-CCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence             788999999999999999976 54         78889999999999999  678899999999999999988766555


Q ss_pred             eecCCceeEEEE
Q psy8152         313 DYMQSRLTSILV  324 (444)
Q Consensus       313 ~~~~~~i~~~~~  324 (444)
                      .....+..++.|
T Consensus       421 ~~~~~~~~~~~~  432 (435)
T 1p22_A          421 EPPRSPSRTYTY  432 (435)
T ss_dssp             ------------
T ss_pred             CCCCCCccceee
Confidence            444444444443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=4.4e-38  Score=297.78  Aligned_cols=275  Identities=17%  Similarity=0.241  Sum_probs=239.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      +|...|+++.|.   +++|++|+.||.|++||+.+++....+.  +|...|.++++++++|++|+.||.|++|++.+++.
T Consensus       131 ~~~~~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~  205 (435)
T 1p22_A          131 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILT--GHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM  205 (435)
T ss_dssp             SSCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEEC--CCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCE
T ss_pred             CCCCcEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeEEEEEc--CCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcE
Confidence            577889998875   8999999999999999999998887765  78999999999999999999999999999999999


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee---eeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI---FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      +..+..|...|.+++|+  +.+|++|+.||.|++||+.++..+   ..+.+|..                  .|.+++| 
T Consensus       206 ~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~------------------~v~~~~~-  264 (435)
T 1p22_A          206 LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------------------AVNVVDF-  264 (435)
T ss_dssp             EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS------------------CEEEEEE-
T ss_pred             EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC------------------cEEEEEe-
Confidence            88888899999999996  469999999999999999987654   44555555                  7999999 


Q ss_pred             cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                       ++++|++|+.|+.|++||++   ....+..+..|...|.+++|+  +++|++|+.||.|++||+++ ++++..+.+|..
T Consensus       265 -~~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~  337 (435)
T 1p22_A          265 -DDKYIVSASGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEE  337 (435)
T ss_dssp             -ETTEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-CCEEEEECCCSS
T ss_pred             -CCCEEEEEeCCCeEEEEECC---cCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCC-CCEEEEEeCCcC
Confidence             56899999999999999999   788899999999999999994  67999999999999999999 999999999999


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCCCc---------eEEEee-cCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKK---------LLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKG  346 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~---------~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d  346 (444)
                      .|++++|  ++.+|++|+.||.|++||+.+++         ++..+. |...|.+++|.           +.++++++.|
T Consensus       338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-----------~~~l~s~s~D  404 (435)
T 1p22_A          338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-----------EFQIVSSSHD  404 (435)
T ss_dssp             CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC-----------SSCEEECCSS
T ss_pred             cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC-----------CCEEEEEeCC
Confidence            9999999  68899999999999999997765         666654 88899999982           2579999999


Q ss_pred             CCccccCCCccccc
Q psy8152         347 DSDEKYDPEHFEMN  360 (444)
Q Consensus       347 ~~i~~W~~~~~~~~  360 (444)
                      |.|++|++......
T Consensus       405 g~i~iwd~~~~~~~  418 (435)
T 1p22_A          405 DTILIWDFLNDPAA  418 (435)
T ss_dssp             SEEEEEC-------
T ss_pred             CEEEEEECCCCCCc
Confidence            99999999865543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=6.5e-39  Score=290.02  Aligned_cols=247  Identities=12%  Similarity=0.141  Sum_probs=202.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe----CCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR----YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~----~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|...|++++|+ |++++|++|+.|++|+|||+.++.......+.+|...|.++.+    ++++|++|+.|++|++||+.
T Consensus        11 ~H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~   89 (316)
T 3bg1_A           11 SHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE   89 (316)
T ss_dssp             ---CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred             cccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence            899999999999 7999999999999999999987754333344588888987753    37899999999999999998


Q ss_pred             CCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCcee---eeeeecccceeeEeeeCCCcccccCcc
Q psy8152         116 TEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTKN---IFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       116 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      +++  ....+.+|...|.+++|+|+  +.+|++|+.|+.|++|+++.+..   ...+..|..                  
T Consensus        90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~------------------  151 (316)
T 3bg1_A           90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI------------------  151 (316)
T ss_dssp             SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS------------------
T ss_pred             CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC------------------
Confidence            874  34356679999999999996  78999999999999999987532   233344444                  


Q ss_pred             ceeEEEEecC-----------------CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC----CEE
Q psy8152         189 WVNGISFLPN-----------------SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS----HYV  247 (444)
Q Consensus       189 ~i~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l  247 (444)
                      .|.+++|+|+                 +++|++|+.|++|++||++......++..+.+|...|.+++|+|++    ++|
T Consensus       152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l  231 (316)
T 3bg1_A          152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI  231 (316)
T ss_dssp             CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred             CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence            5777778776                 4689999999999999997111225667788999999999999986    899


Q ss_pred             EEEcCCCcEEEEEcCCCCc----ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         248 IVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       248 ~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ++++.|++|+||++.. ..    ....+..|...|.+++|+|++++|++++.|++|+||+...
T Consensus       232 as~s~D~~v~iw~~~~-~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          232 ASCSQDGRVFIWTCDD-ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             EEEETTCEEEEEECSS-TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             EEEcCCCeEEEEEccC-ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence            9999999999999875 21    2345567889999999999999999999999999999763

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=6.7e-38  Score=319.88  Aligned_cols=286  Identities=12%  Similarity=0.120  Sum_probs=252.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...|++++|+ |++.+|++|+.+|.|+||++.+++.+..+.  .|..+|.+  ++|++++|++++.+|.|++|++.++
T Consensus        11 ~h~~~v~~i~~s-p~~~~la~~~~~g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~   87 (814)
T 3mkq_A           11 NRSDRVKGIDFH-PTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG   87 (814)
T ss_dssp             EECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred             cCCCceEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceEEEEe--cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence            899999999999 799999999999999999999998888876  55666655  5789999999999999999999999


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      +.+..+..|...|++++|+|++++|++++.||.|++|++.++ .....+..|..                  .|++++|+
T Consensus        88 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~------------------~v~~~~~~  149 (814)
T 3mkq_A           88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH------------------FVMCVAFN  149 (814)
T ss_dssp             CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS------------------CEEEEEEE
T ss_pred             cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC------------------cEEEEEEE
Confidence            988878889999999999999999999999999999999986 66677777766                  79999999


Q ss_pred             c-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-CCeeEEEEcc--CCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         197 P-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-VALSCITTTN--QSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       197 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      | ++.+|++++.||.|++||+.   ...+...+..+. ..+.+++|+|  ++.+|++++.+|.|++||+.+ ++++..+.
T Consensus       150 p~~~~~l~~~~~dg~v~vwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~  225 (814)
T 3mkq_A          150 PKDPSTFASGCLDRTVKVWSLG---QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLE  225 (814)
T ss_dssp             TTEEEEEEEEETTSEEEEEETT---CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-TEEEEEEE
T ss_pred             cCCCCEEEEEeCCCeEEEEECC---CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-CcEEEEEc
Confidence            9 78999999999999999998   566666666554 8899999999  899999999999999999999 99999999


Q ss_pred             cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccc
Q psy8152         273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEK  351 (444)
Q Consensus       273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~  351 (444)
                      +|...|++++|+|++++|++++.||.|++|++.+++.+..+. +...+.+++|+++..        ..+++.+.++.+.+
T Consensus       226 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~~  297 (814)
T 3mkq_A          226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR--------KNYIASGFDNGFTV  297 (814)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCG--------GGEEEEEETTEEEE
T ss_pred             CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCC--------ceEEEEEeCCCEEE
Confidence            999999999999999999999999999999999999888876 678899999986621        23345556777888


Q ss_pred             cCCCccc
Q psy8152         352 YDPEHFE  358 (444)
Q Consensus       352 W~~~~~~  358 (444)
                      |++....
T Consensus       298 ~~~~~~~  304 (814)
T 3mkq_A          298 LSLGNDE  304 (814)
T ss_dssp             EECSCCS
T ss_pred             EEcCCCC
Confidence            8876543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-37  Score=291.49  Aligned_cols=284  Identities=11%  Similarity=0.175  Sum_probs=239.7

Q ss_pred             Ccccc--eEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKAS--VLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~--v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|...  +.++.|+   +..+++++.|+.|++|++.+++....+.. .|...|.++  +|++++|++++.+|.|++|++.
T Consensus        89 ~~~~~~~~~~~~~s---~~~l~~~~~d~~v~lw~~~~~~~~~~~~~-~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~  164 (401)
T 4aez_A           89 GIIDDYYLNLLDWS---NLNVVAVALERNVYVWNADSGSVSALAET-DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE  164 (401)
T ss_dssp             TCCCCTTCBCEEEC---TTSEEEEEETTEEEEEETTTCCEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CCcCCceEEEEeec---CCCEEEEECCCeEEEeeCCCCcEeEeeec-CCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence            44444  3445565   46688899999999999999998877664 366677665  6789999999999999999999


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      +++.+..+..|...|.+++|  ++.+|++++.||.|++||++. ...+..+..|..                  .|.+++
T Consensus       165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------~v~~~~  224 (401)
T 4aez_A          165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS------------------EVCGLA  224 (401)
T ss_dssp             TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS------------------CEEEEE
T ss_pred             CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC------------------CeeEEE
Confidence            99988888899999999999  467999999999999999994 666777777776                  799999


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEc--CCCcEEEEEcCCCCcceeEe
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGS--TTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~  271 (444)
                      |+|++++|++++.|+.|++||++   ...++..+..|...|.+++|+|++ .++++++  .|+.|++||+.+ ++++..+
T Consensus       225 ~~~~~~~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~  300 (401)
T 4aez_A          225 WRSDGLQLASGGNDNVVQIWDAR---SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTV  300 (401)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETT---CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEE
T ss_pred             EcCCCCEEEEEeCCCeEEEccCC---CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEE
Confidence            99999999999999999999999   788888888999999999999976 5666654  799999999999 9998888


Q ss_pred             ccccCceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEe---ecCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152         272 KGFAGCVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKG  346 (444)
Q Consensus       272 ~~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d  346 (444)
                      . |...|++++|+|++++|++++  .||.|++|++.+++.....   .|...|.+++|+++         +.++++++.|
T Consensus       301 ~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d---------g~~l~s~~~d  370 (401)
T 4aez_A          301 D-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD---------GRILSTAASD  370 (401)
T ss_dssp             E-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT---------SSEEEEECTT
T ss_pred             e-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC---------CCEEEEEeCC
Confidence            6 667899999999999999954  8999999999997665543   37889999998854         5789999999


Q ss_pred             CCccccCCCcccccc
Q psy8152         347 DSDEKYDPEHFEMNQ  361 (444)
Q Consensus       347 ~~i~~W~~~~~~~~~  361 (444)
                      +.|++|++..++...
T Consensus       371 g~i~iw~~~~~~~~~  385 (401)
T 4aez_A          371 ENLKFWRVYDGDHVK  385 (401)
T ss_dssp             SEEEEEECCC-----
T ss_pred             CcEEEEECCCCcccc
Confidence            999999998766543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.3e-37  Score=297.25  Aligned_cols=298  Identities=14%  Similarity=0.158  Sum_probs=243.4

Q ss_pred             Ccccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...| +++.|.   +++|++|+.||.|++|++.+++.+..+.  +|...|.++... +.+|++|+.||+|++|++.++
T Consensus       119 ~h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~  193 (464)
T 3v7d_B          119 GHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLS--GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKG  193 (464)
T ss_dssp             CCSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTT
T ss_pred             CCCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEe--CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCC
Confidence            788775 666665   6899999999999999999999888775  788888887542 239999999999999999999


Q ss_pred             CccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc------ccccCccc
Q psy8152         118 PDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE------FDLRRPVW  189 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  189 (444)
                      +++..+.+|...|.+++|++  ++.+|++|+.|+.|++||+.++........... .......|..      ....+...
T Consensus       194 ~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  272 (464)
T 3v7d_B          194 CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHD-YPLVFHTPEENPYFVGVLRGHMAS  272 (464)
T ss_dssp             EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CC-SSEEESCGGGCTTEEEEECCCSSC
T ss_pred             cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCC-cceEeeccCCCeEEEEEccCccce
Confidence            98887888999999999995  778999999999999999998654332211110 0000011100      01112235


Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      |.++  ++++++|++++.|+.|++||++   ...++..+.+|...|.+++|+|++++|++|+.||.|++||+++ ++++.
T Consensus       273 v~~~--~~~~~~l~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~  346 (464)
T 3v7d_B          273 VRTV--SGHGNIVVSGSYDNTLIVWDVA---QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMY  346 (464)
T ss_dssp             EEEE--EEETTEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEE
T ss_pred             EEEE--cCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEE
Confidence            6665  6778999999999999999999   8888999999999999999999999999999999999999999 99999


Q ss_pred             EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152         270 KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD  349 (444)
Q Consensus       270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i  349 (444)
                      ++.+|...|++++|+  +.+|++++.||.|++|++.++.......+...+..++|.++         +.++++++ |+.|
T Consensus       347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~-dg~i  414 (464)
T 3v7d_B          347 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVS---------DNILVSGS-ENQF  414 (464)
T ss_dssp             EECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEEC---------SSEEEEEE-TTEE
T ss_pred             EEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeC---------CCEEEEec-CCeE
Confidence            999999999999997  57999999999999999999888777777788888888754         56788777 8999


Q ss_pred             cccCCCcccccc
Q psy8152         350 EKYDPEHFEMNQ  361 (444)
Q Consensus       350 ~~W~~~~~~~~~  361 (444)
                      ++|++..++...
T Consensus       415 ~iwd~~~g~~~~  426 (464)
T 3v7d_B          415 NIYNLRSGKLVH  426 (464)
T ss_dssp             EEEETTTCCEEE
T ss_pred             EEEECCCCcEEe
Confidence            999999877654

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=8.4e-38  Score=319.17  Aligned_cols=273  Identities=14%  Similarity=0.158  Sum_probs=238.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.+|.|++|++.+++.    +..+.  +|..+|++++|+ |++++|++|+.||.|++|++.+++.+..+. 
T Consensus        23 p~~~~la~~~~~g~v~iwd~~~~~~----~~~~~--~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-   94 (814)
T 3mkq_A           23 PTEPWVLTTLYSGRVEIWNYETQVE----VRSIQ--VTETPVRAGKFI-ARKNWIIVGSDDFRIRVFNYNTGEKVVDFE-   94 (814)
T ss_dssp             SSSSEEEEEETTSEEEEEETTTTEE----EEEEE--CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCce----EEEEe--cCCCcEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEe-
Confidence            4678999999999999999988764    22233  799999999999 799999999999999999999999888775 


Q ss_pred             ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC-CccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152          84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE-PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                       +|...|.+  ++|++++|++++.||.|++|++.++ .....+..|...|.+++|+| ++..|++++.||.|++||+.++
T Consensus        95 -~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~  173 (814)
T 3mkq_A           95 -AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS  173 (814)
T ss_dssp             -CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred             -cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence             56666655  5788999999999999999999887 45556677999999999999 8999999999999999999988


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      .....+..+..                 ..+.+++|+|  ++.+|++++.+|.|++||+.   ...++..+..|...|++
T Consensus       174 ~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~~~~~~~~~~~v~~  233 (814)
T 3mkq_A          174 TPNFTLTTGQE-----------------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKSCVATLEGHMSNVSF  233 (814)
T ss_dssp             SCSEEEECCCT-----------------TCCCEEEECCSTTCCEEEEECTTSEEEEEETT---TTEEEEEEECCSSCEEE
T ss_pred             cceeEEecCCC-----------------CCEEEEEEEECCCCCEEEEEeCCCEEEEEECC---CCcEEEEEcCCCCCEEE
Confidence            77766655441                 2699999999  88999999999999999999   77888889999999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCE-EEEEECCCcEEEEEcCC
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL-ILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~-l~s~~~dg~i~vw~~~~  306 (444)
                      ++|+|++++|++++.||.|++||+.+ ++.+..+..|...|.+++|+|++.. +++++.++.+.+|++..
T Consensus       234 ~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (814)
T 3mkq_A          234 AVFHPTLPIIISGSEDGTLKIWNSST-YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN  302 (814)
T ss_dssp             EEECSSSSEEEEEETTSCEEEEETTT-CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred             EEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence            99999999999999999999999999 9999999999999999999999863 34455577788898764

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.7e-37  Score=306.83  Aligned_cols=292  Identities=12%  Similarity=0.116  Sum_probs=244.4

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccc-eEEEeeecc--CCcEEEEEEcCCeEEEEeCCCC-----
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKAS-VLALNWGNV--EESELLIAYSGQKIKIYDTDFK-----   75 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~--~~~~l~~~~~d~~i~vw~~~~~-----   75 (444)
                      +++.+|++++ ++.|++|++.++.........+.  +|... |++++|+ |  ++++|++|+.||.|++|++.++     
T Consensus        28 pdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~--~h~~~~v~~~~~s-p~~~~~~l~s~~~dg~v~vw~~~~~~~~~~  103 (615)
T 1pgu_A           28 PTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFT--GHGSSVVTTVKFS-PIKGSQYLCSGDESGKVIVWGWTFDKESNS  103 (615)
T ss_dssp             TTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEEC--TTTTSCEEEEEEC-SSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred             CCCCEEEEec-CCeEEEEECCCCCCccccceEEe--cCCCceEEEEEEC-cCCCCCEEEEecCCCEEEEEeCCCCccccc
Confidence            3556777777 88999999987711001123333  89999 9999999 8  9999999999999999999755     


Q ss_pred             ---ccccceeeccccccEEEE--EeCCCeEEEEecC----CcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEe
Q psy8152          76 ---NFNTNTDVSFGEGDIVGV--SRYDECILTAVKS----GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATG  145 (444)
Q Consensus        76 ---~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~  145 (444)
                         +....+  ..|...|.++  +|++++|++++.+    +.|++|+  .++.+..+..|...|.+++|+|++. +|+++
T Consensus       104 ~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  179 (615)
T 1pgu_A          104 VEVNVKSEF--QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTV  179 (615)
T ss_dssp             EEEEEEEEE--ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred             ccccccchh--hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEE
Confidence               344444  4566677655  7899999999987    6888888  5566667888999999999999887 89999


Q ss_pred             eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152         146 GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRP  224 (444)
Q Consensus       146 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~  224 (444)
                      +.|+.|++||+.+++.+..+..|..               ....|++++|+|+ +++|++++.|+.|++||++   ..+.
T Consensus       180 ~~d~~v~vwd~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~  241 (615)
T 1pgu_A          180 GDDGSVVFYQGPPFKFSASDRTHHK---------------QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---SGEF  241 (615)
T ss_dssp             ETTTEEEEEETTTBEEEEEECSSSC---------------TTCCEEEEEECSTTCCEEEEEETTCCEEEEETT---TCCE
T ss_pred             eCCCcEEEEeCCCcceeeeecccCC---------------CCceEEEEEECCCCCCEEEEEeCCCeEEEEECC---CCCE
Confidence            9999999999999998888765542               0115999999999 9999999999999999999   7778


Q ss_pred             eEEE-e---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc----cCceeEEEecCCCCEEEEEECC
Q psy8152         225 VLKV-D---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF----AGCVKDIACPLNENLILSVSLD  296 (444)
Q Consensus       225 ~~~~-~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h----~~~i~~~~~s~~~~~l~s~~~d  296 (444)
                      +..+ .   .|...|.+++|+ ++++|++++.|+.|++||+++ ++.+..+..+    ...+.++.|+ ++.+|++++.+
T Consensus       242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~  318 (615)
T 1pgu_A          242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLD  318 (615)
T ss_dssp             EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETT
T ss_pred             eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECC
Confidence            8887 5   899999999999 999999999999999999999 9999888866    4678888885 88999999999


Q ss_pred             CcEEEEEcCCCceEEEee-cCCceeEEEE
Q psy8152         297 RHFRVHDFHSKKLLRKDY-MQSRLTSILV  324 (444)
Q Consensus       297 g~i~vw~~~~~~~~~~~~-~~~~i~~~~~  324 (444)
                      +.|++|++.+++++..+. |...|.+++|
T Consensus       319 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~  347 (615)
T 1pgu_A          319 GTLNFYELGHDEVLKTISGHNKGITALTV  347 (615)
T ss_dssp             SCEEEEETTEEEEEEEECCCSSCEEEEET
T ss_pred             CCEEEEECCCCcEEEEEeCCCCCEEEEEe
Confidence            999999999988877765 7788888887

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=2.1e-37  Score=291.72  Aligned_cols=282  Identities=11%  Similarity=0.163  Sum_probs=240.9

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      .+..|+|+ + ++.|++|. |++|+|||+.++++...+..++|...|.++  +|+|++|++|+.||.|+||++.+++++.
T Consensus       107 y~~~l~wS-~-~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~  183 (420)
T 4gga_A          107 YLNLVDWS-S-GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR  183 (420)
T ss_dssp             TCBCEEEC-T-TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             cceeEEEC-C-CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence            45779999 4 46777765 899999999999999988888888778765  6889999999999999999999999998


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      .+.+|...+.++++  ++.+|++|+.|+.+++|+... ...+..+.+|..                  .+..+.|+|+++
T Consensus       184 ~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~------------------~~~~~~~~~~g~  243 (420)
T 4gga_A          184 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ------------------EVCGLRWAPDGR  243 (420)
T ss_dssp             EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS------------------CEEEEEECTTSS
T ss_pred             EEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEeccccc------------------ceeeeeecCCCC
Confidence            88899999999887  468999999999999999987 445666777776                  799999999999


Q ss_pred             EEEEEeCCceEEEEEcCCC-CCccceEEEeCCCCCeeEEEEccCC-CEEEE--EcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         201 KVAVCSKQGYVRVYDPKIT-TQRRPVLKVDIPDVALSCITTTNQS-HYVIV--GSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      ++++++.|+.|++|+.... .....+.....|...|.+++|+|.+ .++++  |+.|++|++||+.+ ++++..+..| .
T Consensus       244 ~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~~-~  321 (420)
T 4gga_A          244 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDAH-S  321 (420)
T ss_dssp             EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEECS-S
T ss_pred             eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeeccc-c
Confidence            9999999999999999821 1223556677899999999999975 45554  56899999999999 9999888854 5


Q ss_pred             ceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         277 CVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .+.++.|+|+++.|++++  .|+.|+||++.+++++..+. |..+|++++|+++         +.+++|++.|++|+||+
T Consensus       322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd---------g~~l~S~s~D~tvriWd  392 (420)
T 4gga_A          322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD---------GATVASAAADETLRLWR  392 (420)
T ss_dssp             CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT---------SSCEEEEETTTEEEEEC
T ss_pred             ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC---------CCEEEEEecCCeEEEEE
Confidence            788999999999888765  78999999999999999886 8999999999854         67899999999999999


Q ss_pred             CCcccc
Q psy8152         354 PEHFEM  359 (444)
Q Consensus       354 ~~~~~~  359 (444)
                      +.....
T Consensus       393 v~~~~~  398 (420)
T 4gga_A          393 CFELDP  398 (420)
T ss_dssp             CSCSSC
T ss_pred             CCCCCc
Confidence            875443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=292.14  Aligned_cols=330  Identities=12%  Similarity=0.103  Sum_probs=224.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeec--------ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK--------YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN   76 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~--------~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~   76 (444)
                      ++.+|++|+.+|.|++|++.++.... .+....        ..+|...|++++|+|.++.+|++++.|+.|++|++.+++
T Consensus        55 ~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~  133 (408)
T 4a11_B           55 EGRYMLSGGSDGVIVLYDLENSSRQS-YYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ  133 (408)
T ss_dssp             TCCEEEEEETTSCEEEEECCCCSSSS-CEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred             CCCEEEEEcCCCeEEEEECCCCcccc-eEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence            67899999999999999998876421 111000        015999999999994378899999999999999999988


Q ss_pred             cccceeeccccccEEE--EEe---CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCe
Q psy8152          77 FNTNTDVSFGEGDIVG--VSR---YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKEND  150 (444)
Q Consensus        77 ~~~~~~~~~~~~~v~~--~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~  150 (444)
                      ....+.   +...+.+  +++   ++.++++++.++.|++|++.+++.+..+..|...|.+++|+|++. +|++++.||.
T Consensus       134 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~  210 (408)
T 4a11_B          134 TADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR  210 (408)
T ss_dssp             EEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred             cceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence            887775   3344444  444   455999999999999999999988887888999999999999887 5899999999


Q ss_pred             EEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152         151 LKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       151 i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      |++||++++. ++..+..+.....   .........+...|++++|+|++++|++++.|+.|++||+.   .......+.
T Consensus       211 i~i~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~  284 (408)
T 4a11_B          211 VKLWDVRRASGCLITLDQHNGKKS---QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS---NGENTLVNY  284 (408)
T ss_dssp             EEEEETTCSSCCSEECCTTTTCSC---CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---TCCBCCCCC
T ss_pred             EEEEECCCCCcccccccccccccc---eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC---CCccceecc
Confidence            9999998865 4444322211000   00001112234579999999999999999999999999999   443333222


Q ss_pred             CC-----CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         230 IP-----DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       230 ~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+     ...+........+..+++++.++.|++||+.+ ++++..+.+|...|++++|+|++++|++++.||.|++|++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~  363 (408)
T 4a11_B          285 GKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS-GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP  363 (408)
T ss_dssp             CCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT-CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             ccccccccccceeEEecCCCceEEEEecCCEEEEEECcC-CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence            21     11222222233455677778899999999999 9999999999999999999999999999999999999999


Q ss_pred             CCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         305 HSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      .+++++..........  .+.+.        ......+.+.++.+++|+..
T Consensus       364 ~~~~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~~~W~~~  404 (408)
T 4a11_B          364 SLYEPVPDDDETTTKS--QLNPA--------FEDAWSSSDEEGGTSAWSHP  404 (408)
T ss_dssp             CC-------------------------------------------------
T ss_pred             CCCCccCCCCceEecc--ccccc--------cceeecccCccCceeecCCc
Confidence            9988776543222221  11111        12345567788999999765

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-38  Score=299.62  Aligned_cols=271  Identities=11%  Similarity=0.079  Sum_probs=223.2

Q ss_pred             CcccEEEecCCCcEEEEEcCC---CccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC---CCccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSK---DKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD---FKNFN   78 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~---~~~~~   78 (444)
                      ++.+|++|+.||.|++|++.+   +..    +.....+.|...|++++|+ |++.+|++|+.||.|++|++.   +++..
T Consensus        75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~----~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~  149 (437)
T 3gre_A           75 ETPYLITGSDQGVIKIWNLKEIIVGEV----YSSSLTYDCSSTVTQITMI-PNFDAFAVSSKDGQIIVLKVNHYQQESEV  149 (437)
T ss_dssp             SSCEEEEEETTSEEEEEEHHHHHTTCC----CSCSEEEECSSCEEEEEEC-TTSSEEEEEETTSEEEEEEEEEEEETTEE
T ss_pred             CCCEEEEecCCceEEEeECcccccCcc----cceeeeccCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEEeccccCCcee
Confidence            678999999999999999976   331    1112222689999999999 799999999999999999994   45444


Q ss_pred             ccee--------ecc--ccccEEEE----EeCCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEE
Q psy8152          79 TNTD--------VSF--GEGDIVGV----SRYDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNII  142 (444)
Q Consensus        79 ~~~~--------~~~--~~~~v~~~----s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l  142 (444)
                      ..+.        ...  +...+.++    ++++.+|++++.|+.|++||+.+++++..+..  |...|++++|+|++++|
T Consensus       150 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l  229 (437)
T 3gre_A          150 KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVL  229 (437)
T ss_dssp             EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEE
T ss_pred             eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEE
Confidence            4332        111  34445554    36788999999999999999999998877776  88999999999999999


Q ss_pred             EEeeCCCeEEEEEcCCceeeeeee-cccceeeEeeeCCCcccccCccceeEEEEec----CCCEEEEEeCCceEEEEEcC
Q psy8152         143 ATGGKENDLKLWDLNTTKNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLP----NSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~d~~i~i~d~~  217 (444)
                      ++|+.||.|++||+++++++..+. .+..                  .|++++|+|    ++.+|++++.|+.|++||++
T Consensus       230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~  291 (437)
T 3gre_A          230 ILGTTRGIIDIWDIRFNVLIRSWSFGDHA------------------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV  291 (437)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEEBCTTCE------------------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred             EEEcCCCeEEEEEcCCccEEEEEecCCCC------------------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence            999999999999999999888775 4444                  689996665    56799999999999999998


Q ss_pred             CCCCccceEEEeC--------------------------CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         218 ITTQRRPVLKVDI--------------------------PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       218 ~~~~~~~~~~~~~--------------------------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                         ....+..+..                          |...|++++|+ ++++|++|+.|+.|++||+.+ ++.+..+
T Consensus       292 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~  366 (437)
T 3gre_A          292 ---KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE-LSSSKAV  366 (437)
T ss_dssp             ---TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC-GGGCEEE
T ss_pred             ---CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC-cccceEE
Confidence               6666665553                          44568889999 778999999999999999999 8877777


Q ss_pred             cc-------------------------------------ccCceeEEEecCC--CCEEEEEECCCcEEEEE
Q psy8152         272 KG-------------------------------------FAGCVKDIACPLN--ENLILSVSLDRHFRVHD  303 (444)
Q Consensus       272 ~~-------------------------------------h~~~i~~~~~s~~--~~~l~s~~~dg~i~vw~  303 (444)
                      .+                                     |...|++++|+++  +.+|++|+.||.|+||+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          367 ISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             ECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             ecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            65                                     8889999999988  77999999999999995

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.3e-37  Score=284.76  Aligned_cols=276  Identities=9%  Similarity=0.051  Sum_probs=235.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccceeeccccccEEEE--EeCCC-eEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTNTDVSFGEGDIVGV--SRYDE-CILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~~~~v~~~--s~~~~-~l~~~~~dg~i~iw~  113 (444)
                      +|...|++++|+ |++.+|++++.|+.|++|++.++.   ....+  ..|...|.++  +|+++ +|++++.+|.|++|+
T Consensus         9 ~h~~~v~~~~~s-~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd   85 (342)
T 1yfq_A            9 APKDYISDIKII-PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS--LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEEEETTTTEEEEEEE--EECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             CCCCcEEEEEEc-CCCCEEEEEcCCCeEEEEEeCCCCccccceee--eecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence            799999999999 799999999999999999998776   12222  2666677655  78999 999999999999999


Q ss_pred             c-CCCCccccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---------ceeeeeeecccceeeEeeeCCCc
Q psy8152         114 Y-KTEPDQWTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---------TKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       114 ~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      + .+++.. .+..  |...|.+++|+| +.+|++++.|+.|++||+++         ++++..+. +..           
T Consensus        86 ~~~~~~~~-~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~-----------  151 (342)
T 1yfq_A           86 LIGSPSFQ-ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN-----------  151 (342)
T ss_dssp             SSSSSSEE-ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-----------
T ss_pred             eccCCceE-eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-----------
Confidence            9 877664 5777  999999999999 99999999999999999987         55555544 333           


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-CCccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEE
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-TQRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAV  259 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw  259 (444)
                             .|.+++|+|++  |++++.++.|++||++ . ...........+...+.+++|+| ++++|++++.+|.|++|
T Consensus       152 -------~v~~~~~~~~~--l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~  221 (342)
T 1yfq_A          152 -------KIFTMDTNSSR--LIVGMNNSQVQWFRLP-LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE  221 (342)
T ss_dssp             -------CEEEEEECSSE--EEEEESTTEEEEEESS-CCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred             -------ceEEEEecCCc--EEEEeCCCeEEEEECC-ccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence                   69999999876  9999999999999999 2 22333444557788999999999 99999999999999999


Q ss_pred             EcCCCC------cceeEeccccC---------ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-c-CCceeEE
Q psy8152         260 DLRGKG------KPCYKYKGFAG---------CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-M-QSRLTSI  322 (444)
Q Consensus       260 d~~~~~------~~~~~~~~h~~---------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~-~~~i~~~  322 (444)
                      ++.. .      +++..+..|..         .|++++|+|++++|++++.||.|++||+.+++++..+. | ..+|.++
T Consensus       222 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~  300 (342)
T 1yfq_A          222 FFDD-QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI  300 (342)
T ss_dssp             ECCT-TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred             EEcC-CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEe
Confidence            9988 6      88888888865         99999999999999999999999999999999988876 5 8889988


Q ss_pred             EEcCCCcccccchhhhhccccccCCC-ccccCC
Q psy8152         323 LVRSDFSLENETKKEEQEHSEEKGDS-DEKYDP  354 (444)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~s~~~d~~-i~~W~~  354 (444)
                      +  +         ++.++++++.|+. .+.|..
T Consensus       301 ~--~---------~~~~l~s~s~Dg~~~~~~~~  322 (342)
T 1yfq_A          301 A--C---------SDNILCLATSDDTFKTNAAI  322 (342)
T ss_dssp             E--E---------CSSEEEEEEECTHHHHCSSS
T ss_pred             c--C---------CCCeEEEEecCCcccccccc
Confidence            7  2         2478999999999 777764

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-38  Score=296.03  Aligned_cols=273  Identities=10%  Similarity=0.151  Sum_probs=208.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-ccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~   82 (444)
                      +++.+|++|+.+|.|++|++.++..  .....+.  +|...|++++|+ |++++|++++.|+.|++|++.+++ ......
T Consensus        21 ~~g~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~--~h~~~v~~~~~s-~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~   95 (377)
T 3dwl_C           21 SQRTEFVTTTATNQVELYEQDGNGW--KHARTFS--DHDKIVTCVDWA-PKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV   95 (377)
T ss_dssp             SSSSEEECCCSSSCBCEEEEETTEE--EECCCBC--CCSSCEEEEEEC-TTTCCEEEEETTSSEEEC------CCCCEEE
T ss_pred             CCCCEEEEecCCCEEEEEEccCCce--EEEEEEe--cCCceEEEEEEe-CCCCEEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence            3668899999999999999987731  1122222  899999999999 799999999999999999999877 333334


Q ss_pred             eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc---cccccc-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          83 VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD---QWTNFN-VGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        83 ~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      ...|...|.++  +|++++|++++.|+.|++|++.+++.   ...+.. |...|.+++|+|++++|++++.|+.|++||+
T Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  175 (377)
T 3dwl_C           96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA  175 (377)
T ss_dssp             CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred             ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence            45778888776  57899999999999999999998763   445556 9999999999999999999999999999999


Q ss_pred             CC------------------ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152         157 NT------------------TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI  218 (444)
Q Consensus       157 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  218 (444)
                      ..                  ++++..+ .|..                  .|++++|+|++++|++++.|+.|++||+. 
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------~v~~~~~sp~~~~l~~~~~d~~i~iwd~~-  235 (377)
T 3dwl_C          176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG------------------WVHAVGFSPSGNALAYAGHDSSVTIAYPS-  235 (377)
T ss_dssp             CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS------------------SEEEEEECTTSSCEEEEETTTEEC-CEEC-
T ss_pred             EecccCCCccccccccccchhhhhhcc-cCCc------------------eEEEEEECCCCCEEEEEeCCCcEEEEECC-
Confidence            63                  3334333 3333                  79999999999999999999999999999 


Q ss_pred             CCCccc----eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-cc-------------------------e
Q psy8152         219 TTQRRP----VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG-KP-------------------------C  268 (444)
Q Consensus       219 ~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~-------------------------~  268 (444)
                        ....    +..+..|...|.+++|+|++++|++|+.++.+ +|+....+ +.                         .
T Consensus       236 --~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (377)
T 3dwl_C          236 --APEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE  312 (377)
T ss_dssp             --STTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred             --CCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence              5554    77788999999999999999999999876655 66654201 00                         0


Q ss_pred             ---------eEe----------------ccccCceeEEEecCCC-C---EEEEEECCCcEEEEEc
Q psy8152         269 ---------YKY----------------KGFAGCVKDIACPLNE-N---LILSVSLDRHFRVHDF  304 (444)
Q Consensus       269 ---------~~~----------------~~h~~~i~~~~~s~~~-~---~l~s~~~dg~i~vw~~  304 (444)
                               ..+                ..|...|+++++.+.. .   .|+|++.||.|+||++
T Consensus       313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          313 GPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             ------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                     011                1389999999976543 3   6999999999999985

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=5.5e-38  Score=298.19  Aligned_cols=278  Identities=13%  Similarity=0.207  Sum_probs=221.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----------cccceeecccc------------ccEEE--EE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----------FNTNTDVSFGE------------GDIVG--VS   94 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----------~~~~~~~~~~~------------~~v~~--~s   94 (444)
                      .|.+.|++++|+ |++.+||+|+.||.|+||++.+++           +...+.  +|.            ..|.+  ++
T Consensus        26 ~~~~~V~~v~~s-~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~V~~l~~~  102 (447)
T 3dw8_B           26 AEADIISTVEFN-HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ--SHEPEFDYLKSLEIEEKINKIRWL  102 (447)
T ss_dssp             CGGGSEEEEEEC-SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE--CCCCEEEGGGTEEECCCCCEEEEC
T ss_pred             cccCcEEEEEEC-CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc--cccccccccccccccCceEEEEEc
Confidence            578999999999 799999999999999999998776           344444  565            55654  56


Q ss_pred             eCC--CeEEEEecCCcEEEEEcCCCCcc----------------------------------------ccccccCCCeEE
Q psy8152          95 RYD--ECILTAVKSGDVKLWRYKTEPDQ----------------------------------------WTNFNVGPQLEC  132 (444)
Q Consensus        95 ~~~--~~l~~~~~dg~i~iw~~~~~~~~----------------------------------------~~~~~~~~~v~~  132 (444)
                      |++  .+|++++.|+.|++|++.++...                                        ....+|...|.+
T Consensus       103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~  182 (447)
T 3dw8_B          103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS  182 (447)
T ss_dssp             CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred             CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence            776  78999999999999998764331                                        113569999999


Q ss_pred             EEEeccCCEEEEeeCCCeEEEEEcCC-ceeeee-------eecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEE
Q psy8152         133 MKHNKHSNIIATGGKENDLKLWDLNT-TKNIFS-------AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVA  203 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~  203 (444)
                      ++|+|++++|++| .|+.|++||+++ ++.+..       +..|..                  .|++++|+|++ ++|+
T Consensus       183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~p~~~~~l~  243 (447)
T 3dw8_B          183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE------------------VITAAEFHPNSCNTFV  243 (447)
T ss_dssp             EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC------------------CEEEEEECSSCTTEEE
T ss_pred             EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc------------------ceEEEEECCCCCcEEE
Confidence            9999999999998 799999999995 434332       223333                  79999999998 9999


Q ss_pred             EEeCCceEEEEEcCCCCCccc----eEEEeCCCC------------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc
Q psy8152         204 VCSKQGYVRVYDPKITTQRRP----VLKVDIPDV------------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP  267 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  267 (444)
                      +++.|+.|++||++   ....    +..+..|..            .|.+++|+|++++|++++. +.|++||++..+++
T Consensus       244 s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~  319 (447)
T 3dw8_B          244 YSSSKGTIRLCDMR---ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP  319 (447)
T ss_dssp             EEETTSCEEEEETT---TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred             EEeCCCeEEEEECc---CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence            99999999999999   4444    677787775            8999999999999999998 99999999864788


Q ss_pred             eeEeccccCc---------------eeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe-------------------
Q psy8152         268 CYKYKGFAGC---------------VKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD-------------------  313 (444)
Q Consensus       268 ~~~~~~h~~~---------------i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-------------------  313 (444)
                      +..+.+|...               +..++|+|++++|++++.||.|++|++.+++.+...                   
T Consensus       320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (447)
T 3dw8_B          320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCA  399 (447)
T ss_dssp             SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEEC
T ss_pred             cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccc
Confidence            8888888642               234899999999999999999999999998876422                   


Q ss_pred             --------------ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         314 --------------YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       314 --------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                                    .+...|..++|+|+         +.++++++.++ +.+|.
T Consensus       400 ~~~~~~~~~~~~~~~~~~~i~~~~~~p~---------~~~la~~~~~~-~~~~~  443 (447)
T 3dw8_B          400 SGKRKKDEISVDSLDFNKKILHTAWHPK---------ENIIAVATTNN-LYIFQ  443 (447)
T ss_dssp             SSCCCTTCEEGGGCCTTSCCCEEEECSS---------SSEEEEECSSC-EEEEE
T ss_pred             cCCcccccccccccccCCceeEEEECCC---------CCEEEEEecce-eeeec
Confidence                          22345777887754         56777776654 66775

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=4.5e-37  Score=291.80  Aligned_cols=276  Identities=14%  Similarity=0.224  Sum_probs=248.7

Q ss_pred             Ccccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +|...| +++.+   ++++|++|+.||.|++|++.+++.+..+.  +|...|.++.+++++|++++.||+|++|++.+++
T Consensus       116 ~h~~~v~~~~~~---~g~~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~  190 (445)
T 2ovr_B          116 GHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE  190 (445)
T ss_dssp             CSTTSCEEEEEE---ETTEEEEEETTSCEEEEETTTCCEEEECC--CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred             ccCCCcEEEEEE---cCCEEEEEECCCcEEEEECCCCcEEEEEc--CCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCc
Confidence            788865 55554   48999999999999999999999887775  7899999998889999999999999999999999


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                      .+..+..|...|.+++|+  ++.|++|+.||.|++||+.+++.+..+..+..                  .|.+++|  +
T Consensus       191 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~------------------~v~~~~~--~  248 (445)
T 2ovr_B          191 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA------------------AVRCVQY--D  248 (445)
T ss_dssp             EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSS------------------CEEEEEE--C
T ss_pred             EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc------------------cEEEEEE--C
Confidence            888888899999999995  57899999999999999999999988888777                  7999998  6


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCce
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCV  278 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i  278 (444)
                      +++|++++.|+.|++||++   ...++..+.+|...|.+++|  ++.+|++++.||.|++||+++ ++++..+.+|...+
T Consensus       249 ~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v  322 (445)
T 2ovr_B          249 GRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLT  322 (445)
T ss_dssp             SSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCE
T ss_pred             CCEEEEEcCCCEEEEEECC---CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC-CCEEEEEcCCcccE
Confidence            7899999999999999999   78888999999999999999  788999999999999999999 99999999999999


Q ss_pred             eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         279 KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       279 ~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      .++.++  +++|++++.||.|++||+.+++++..+.    |...|.+++|.+           .++++++.||.|++|++
T Consensus       323 ~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~l~s~~~dg~v~iwd~  389 (445)
T 2ovr_B          323 SGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-----------NFVITSSDDGTVKLWDL  389 (445)
T ss_dssp             EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-----------SEEEEEETTSEEEEEET
T ss_pred             EEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC-----------CEEEEEeCCCeEEEEEC
Confidence            988874  6799999999999999999999988875    677899998852           47999999999999999


Q ss_pred             Ccccccc
Q psy8152         355 EHFEMNQ  361 (444)
Q Consensus       355 ~~~~~~~  361 (444)
                      ..++...
T Consensus       390 ~~~~~~~  396 (445)
T 2ovr_B          390 KTGEFIR  396 (445)
T ss_dssp             TTCCEEE
T ss_pred             CCCceee
Confidence            9776554

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.3e-37  Score=286.97  Aligned_cols=278  Identities=10%  Similarity=0.112  Sum_probs=213.2

Q ss_pred             CCcccEEEecCC-------CcEEEEEcCCCccc----eeeeeeecccCcccceEEEeeeccCCcEEEEE-----------
Q psy8152           4 ADDYNIYIGSST-------GAFKGVNLSKDKCI----IKNIQNVKYITNKASVLALNWGNVEESELLIA-----------   61 (444)
Q Consensus         4 ~~~~~l~~g~~d-------g~i~i~~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-----------   61 (444)
                      +++.+|++|+.+       +.|++|++......    ......+...+|...|.+++++   ++.+++|           
T Consensus        24 ~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~g~~~~~~~l~s~  100 (365)
T 4h5i_A           24 NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILVGCNENSTKITQG  100 (365)
T ss_dssp             ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEEECCCCHHHHHHT
T ss_pred             CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEEEECCCccEEEEe
Confidence            456788888643       35999999766531    1111222222788899999877   5566665           


Q ss_pred             EcCCeEEEEeCCCCccccce-------eeccc--cccEEEEEeCCCeEEEEe--cCCcEEEEEcCCCCccccccccCCCe
Q psy8152          62 YSGQKIKIYDTDFKNFNTNT-------DVSFG--EGDIVGVSRYDECILTAV--KSGDVKLWRYKTEPDQWTNFNVGPQL  130 (444)
Q Consensus        62 ~~d~~i~vw~~~~~~~~~~~-------~~~~~--~~~v~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v  130 (444)
                      +.|+.+++|++.+......+       ....+  ...+++|+|+|+++++++  .|++|+|||+.+++++. ...|...|
T Consensus       101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~-~~~~~~~V  179 (365)
T 4h5i_A          101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF-EIETRGEV  179 (365)
T ss_dssp             SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE-EEECSSCC
T ss_pred             cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE-EeCCCCce
Confidence            45788999998654322111       11111  234678899999987654  68999999999998886 45688899


Q ss_pred             EEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee--ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC
Q psy8152         131 ECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA--KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ  208 (444)
Q Consensus       131 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  208 (444)
                      .+++|+|++++|++++.+ .+++|+..+++.+...  ..+..                  .|++++|+|+++++++++.+
T Consensus       180 ~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~v~fspdg~~l~~~s~d  240 (365)
T 4h5i_A          180 KDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNW------------------SLSKINFIADDTVLIAASLK  240 (365)
T ss_dssp             CEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTE------------------EEEEEEEEETTEEEEEEEES
T ss_pred             EEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCC------------------CEEEEEEcCCCCEEEEEecC
Confidence            999999999999999855 5677777776655433  23333                  69999999999999999888


Q ss_pred             c----eEEEEEcCCCCCc--cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe-ccccCceeEE
Q psy8152         209 G----YVRVYDPKITTQR--RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY-KGFAGCVKDI  281 (444)
Q Consensus       209 ~----~i~i~d~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~~i~~~  281 (444)
                      +    .+++|++. ....  .....+..|...|++++|+|+|++||+|+.|++|+|||+++ ++++.++ .+|..+|++|
T Consensus       241 ~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v  318 (365)
T 4h5i_A          241 KGKGIVLTKISIK-SGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEV  318 (365)
T ss_dssp             SSCCEEEEEEEEE-TTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEE
T ss_pred             CcceeEEeecccc-cceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEE
Confidence            7    68899987 1111  22455778999999999999999999999999999999999 9999885 6899999999


Q ss_pred             EecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         282 ACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +|+|++++||||+.|++|+||++..
T Consensus       319 ~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          319 TISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EECTTSCEEEEEETTSEEEEEECCT
T ss_pred             EECCCCCEEEEEeCCCeEEEEEcCC
Confidence            9999999999999999999999965

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.4e-37  Score=278.79  Aligned_cols=243  Identities=14%  Similarity=0.118  Sum_probs=203.3

Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC--CccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE--PDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~  157 (444)
                      .+|...|.++  +|++++|++|+.|++|+||++...  +++..+.+|..+|++++|+|  ++++|++|+.|++|++||+.
T Consensus         6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~   85 (297)
T 2pm7_B            6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE   85 (297)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred             cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence            4778888654  688999999999999999999743  55667788999999999986  48999999999999999998


Q ss_pred             Cce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         158 TTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      +++  .+..+..|..                  .|++++|+|+  +.+|++++.|++|++||++ .........+.+|..
T Consensus        86 ~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~-~~~~~~~~~~~~h~~  146 (297)
T 2pm7_B           86 NGRWSQIAVHAVHSA------------------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFK-ENGTTSPIIIDAHAI  146 (297)
T ss_dssp             SSCBCCCEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTSEEEEEEBC-SSSCBCCEEEECCSS
T ss_pred             CCceEEEEEeecCCC------------------ceeEEEeCcCCCCcEEEEEECCCcEEEEEec-CCCceeeeeeecccC
Confidence            864  4455555555                  7999999997  7899999999999999998 222223456789999


Q ss_pred             CeeEEEEccC-------------CCEEEEEcCCCcEEEEEcCCCCc----ceeEeccccCceeEEEecCCC---CEEEEE
Q psy8152         234 ALSCITTTNQ-------------SHYVIVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVKDIACPLNE---NLILSV  293 (444)
Q Consensus       234 ~i~~~~~~~~-------------~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~~~~~s~~~---~~l~s~  293 (444)
                      .|.+++|+|+             +++|++|+.|+.|+|||++. +.    ++..+.+|...|++++|+|++   .+|+++
T Consensus       147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~-~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~  225 (297)
T 2pm7_B          147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV  225 (297)
T ss_dssp             CEEEEEECCCC------------CCEEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred             ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC-CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence            9999999997             57999999999999999987 65    567888999999999999985   799999


Q ss_pred             ECCCcEEEEEcCCCc--eEE-Ee---ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         294 SLDRHFRVHDFHSKK--LLR-KD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       294 ~~dg~i~vw~~~~~~--~~~-~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      +.|++|+||++.+..  ... .+   .+...|.+++|+++         +.++++++.|+.|+||+..
T Consensus       226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEETTSCEEEEEEC
T ss_pred             ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCC---------CCEEEEEcCCCcEEEEEEC
Confidence            999999999998743  111 22   36678999998854         5789999999999999865

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=9.2e-38  Score=292.78  Aligned_cols=309  Identities=13%  Similarity=0.093  Sum_probs=247.4

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCccccceee----------
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTDV----------   83 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~----------   83 (444)
                      ++.+++|++...+.    ...+.  +|.+.|++++|+ | ++++|++|+.||.|++|++.++.....+..          
T Consensus        22 ~~~~~v~~~~~~~~----~~~~~--~h~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~   94 (408)
T 4a11_B           22 ESTRRVLGLELNKD----RDVER--IHGGGINTLDIE-PVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDH   94 (408)
T ss_dssp             HHHHHHHTEEECTT----EEECC--CCSSCEEEEEEC-TTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTC
T ss_pred             cCcceeeccccCcc----eeeee--ccCCcEEEEEEe-cCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccc
Confidence            44566777665553    12222  799999999999 7 999999999999999999998877766542          


Q ss_pred             -ccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEc
Q psy8152          84 -SFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        84 -~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~  156 (444)
                       .+|...|.++  +| ++.+|++++.+|.|++|++.+++... ...+...+.+++|+|   ++.++++++.++.|++||+
T Consensus        95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~  173 (408)
T 4a11_B           95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL  173 (408)
T ss_dssp             TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred             cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce-eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence             1377778776  45 66799999999999999999988875 556888999999998   4459999999999999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEE-------
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKV-------  228 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------  228 (444)
                      ++++.+..+..|..                  .|++++|+|++. +|++++.||.|++||++  ....++..+       
T Consensus       174 ~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~  233 (408)
T 4a11_B          174 KSGSCSHILQGHRQ------------------EILAVSWSPRYDYILATASADSRVKLWDVR--RASGCLITLDQHNGKK  233 (408)
T ss_dssp             SSSCCCEEECCCCS------------------CEEEEEECSSCTTEEEEEETTSCEEEEETT--CSSCCSEECCTTTTCS
T ss_pred             CCcceeeeecCCCC------------------cEEEEEECCCCCcEEEEEcCCCcEEEEECC--CCCccccccccccccc
Confidence            99998888887776                  799999999997 68999999999999998  122233333       


Q ss_pred             --------eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-----CceeEEEecCCCCEEEEEEC
Q psy8152         229 --------DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-----GCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       229 --------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-----~~i~~~~~s~~~~~l~s~~~  295 (444)
                              ..|...|.+++|+|++++|++++.||.|++||+.+ ++.+..+..+.     ..+........+..+++++.
T Consensus       234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (408)
T 4a11_B          234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN-GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY  312 (408)
T ss_dssp             CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred             ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC-CccceeccccccccccccceeEEecCCCceEEEEec
Confidence                    56888999999999999999999999999999998 77665554321     22222233334566777788


Q ss_pred             CCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         296 DRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       296 dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      ++.|++|++.+++++..+. |...|.+++|+++         +.++++++.||.|++|++...+...
T Consensus       313 ~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iw~~~~~~~~~  370 (408)
T 4a11_B          313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN---------FQELYSGSRDCNILAWVPSLYEPVP  370 (408)
T ss_dssp             TTEEEEEETTTCCEEEEECCCSSCEEEEEEETT---------TTEEEEEETTSCEEEEEECC-----
T ss_pred             CCEEEEEECcCCcceeeeccCCCeEEEEEEcCC---------CCEEEEECCCCeEEEEeCCCCCccC
Confidence            9999999999999998887 8899999999854         5789999999999999998776544

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=4.5e-37  Score=281.53  Aligned_cols=266  Identities=17%  Similarity=0.167  Sum_probs=217.2

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc--cceeeccccccEEEEE--e--CCCeEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN--TNTDVSFGEGDIVGVS--R--YDECILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~--~~~~~~~~~~~v~~~s--~--~~~~l~~~~~dg~i~iw~  113 (444)
                      +|...|++++|+ |++.+|++|+.||.|++|++.++...  ......+|...|.++.  |  ++++|++++.||.|++|+
T Consensus         9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd   87 (351)
T 3f3f_A            9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE   87 (351)
T ss_dssp             CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence            899999999999 79999999999999999999876422  1222347788887764  5  589999999999999999


Q ss_pred             cCCCC---------ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152         114 YKTEP---------DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       114 ~~~~~---------~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      +.+++         .+..+..|...|.+++|+|+  +.+|++++.||.|++||+++++.+..+.... ......+.+   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~---  163 (351)
T 3f3f_A           88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS-EMKVLSIPP---  163 (351)
T ss_dssp             ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE-EEESCSCCC---
T ss_pred             cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc-ccccccccc---
Confidence            98873         34456679999999999998  9999999999999999999877654443211 111111111   


Q ss_pred             cccCccceeEEEEecC---CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC----CEEEEEcCCCc
Q psy8152         183 DLRRPVWVNGISFLPN---SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS----HYVIVGSTTGD  255 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~  255 (444)
                       ..+...+.+++|+|+   +.+|++++.++.+.+|+.. ......+..+.+|...|++++|+|++    ++|++|+.||.
T Consensus       164 -~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~  241 (351)
T 3f3f_A          164 -ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK-DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR  241 (351)
T ss_dssp             -SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT-TSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred             -CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC-CCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence             123346999999997   7999999999999888877 33334577788899999999999998    89999999999


Q ss_pred             EEEEEcCCCC----------------------------------------------cceeEeccccCceeEEEecCCCCE
Q psy8152         256 MMAVDLRGKG----------------------------------------------KPCYKYKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       256 i~iwd~~~~~----------------------------------------------~~~~~~~~h~~~i~~~~~s~~~~~  289 (444)
                      |++||++. +                                              +++..+.+|...|++++|+|++++
T Consensus       242 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~  320 (351)
T 3f3f_A          242 IRIFKITE-KLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI  320 (351)
T ss_dssp             EEEEEEEE-CC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred             EEEEeCCC-CcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE
Confidence            99999986 4                                              567778899999999999999999


Q ss_pred             EEEEECCCcEEEEEcCCCceEEEe
Q psy8152         290 ILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      |++++.||.|+||++.+++.+..+
T Consensus       321 l~s~~~dg~v~iw~~~~~~~~~~~  344 (351)
T 3f3f_A          321 LSSAGDDGKVRLWKATYSNEFKCM  344 (351)
T ss_dssp             EEEEETTSCEEEEEECTTSCEEEE
T ss_pred             EEEecCCCcEEEEecCcCcchhhe
Confidence            999999999999999987665543

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=3.2e-36  Score=272.65  Aligned_cols=280  Identities=11%  Similarity=0.147  Sum_probs=234.3

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      .+.+|+|| ++ ++|++| .|++|+|||+.+++++..+..++|...|.++  +|++++|++|+.||+|++|++.+++++.
T Consensus        27 y~~~l~WS-~~-~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~  103 (318)
T 4ggc_A           27 YLNLVDWS-SG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR  103 (318)
T ss_dssp             TCBCEEEC-TT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             cceEEEEC-CC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence            35789999 45 466665 5899999999999999998888888888765  6889999999999999999999999988


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      .+..|...+.++.+  ++.++++++.++.+++|+.... ..+..+..|..                  .+..+.++++++
T Consensus       104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~  163 (318)
T 4ggc_A          104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ------------------EVCGLRWAPDGR  163 (318)
T ss_dssp             EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS------------------CEEEEEECTTSS
T ss_pred             EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccC------------------ceEEEEEcCCCC
Confidence            88889888877655  5689999999999999999874 45566666666                  799999999999


Q ss_pred             EEEEEeCCceEEEEEcCCCC-CccceEEEeCCCCCeeEEEEccCCCE---EEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         201 KVAVCSKQGYVRVYDPKITT-QRRPVLKVDIPDVALSCITTTNQSHY---VIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      +|++++.|+.|++||+++.. ..........+...|.+++++|.+..   +++++.++.|++|+... ........ +..
T Consensus       164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~~~~~-~~~  241 (318)
T 4ggc_A          164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVD-AHS  241 (318)
T ss_dssp             EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEEEEEE-CSS
T ss_pred             EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc-cccccccc-cee
Confidence            99999999999999998211 12334556678889999999997643   34678899999999998 66655544 677


Q ss_pred             ceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         277 CVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .+..+.|+|.+..+++++  .|+.|+|||+.+++++.++. |...|++++|+++         +.+++|++.|++|+||+
T Consensus       242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd---------g~~l~S~s~D~~v~iWd  312 (318)
T 4ggc_A          242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD---------GATVASAAADETLRLWR  312 (318)
T ss_dssp             CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT---------SSCEEEEETTTEEEEEC
T ss_pred             eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC---------CCEEEEEecCCeEEEEE
Confidence            899999999999887765  79999999999999999886 8999999999854         67899999999999999


Q ss_pred             CCcc
Q psy8152         354 PEHF  357 (444)
Q Consensus       354 ~~~~  357 (444)
                      +...
T Consensus       313 ~~~~  316 (318)
T 4ggc_A          313 CFEL  316 (318)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            8653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=4.6e-37  Score=287.77  Aligned_cols=276  Identities=12%  Similarity=0.100  Sum_probs=224.5

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCc-------ccc
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKN-------FNT   79 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~-------~~~   79 (444)
                      .+++++.+|.|++|++.........+..+.  +|...|++++|+ | ++.+|++|+.||.|+||++.++.       .+.
T Consensus        49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~-p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~  125 (402)
T 2aq5_A           49 LICEASGGGAFLVLPLGKTGRVDKNVPLVC--GHTAPVLDIAWC-PHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI  125 (402)
T ss_dssp             EEBCCSSSCCEEEEETTCCEECCTTCCCBC--CCSSCEEEEEEC-TTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSE
T ss_pred             EEEEEcCCCEEEEEECccCCCCCCCCceEe--cCCCCEEEEEeC-CCCCCEEEEEeCCCeEEEEEccCCCCccccCCceE
Confidence            445578999999999966532112222222  899999999999 6 89999999999999999998873       344


Q ss_pred             ceeeccccccEEEE--EeCC-CeEEEEecCCcEEEEEcCCCCccccc--cccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152          80 NTDVSFGEGDIVGV--SRYD-ECILTAVKSGDVKLWRYKTEPDQWTN--FNVGPQLECMKHNKHSNIIATGGKENDLKLW  154 (444)
Q Consensus        80 ~~~~~~~~~~v~~~--s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  154 (444)
                      .+  .+|...|.++  +|++ .+|++++.|+.|++||+.+++.+..+  ..|...|.+++|+|++++|++++.|+.|++|
T Consensus       126 ~~--~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  203 (402)
T 2aq5_A          126 TL--EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVI  203 (402)
T ss_dssp             EE--ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred             Ee--cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEE
Confidence            44  4677777665  6776 68999999999999999999888766  6799999999999999999999999999999


Q ss_pred             EcCCceeeeee-ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE---eCCceEEEEEcCCCCCcc-ceEEEe
Q psy8152         155 DLNTTKNIFSA-KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC---SKQGYVRVYDPKITTQRR-PVLKVD  229 (444)
Q Consensus       155 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~-~~~~~~  229 (444)
                      |+++++.+..+ ..+..                 ..+.+++|+|++.+|++|   +.++.|++||++   ... ++....
T Consensus       204 d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~---~~~~~~~~~~  263 (402)
T 2aq5_A          204 EPRKGTVVAEKDRPHEG-----------------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTK---HLEEPLSLQE  263 (402)
T ss_dssp             ETTTTEEEEEEECSSCS-----------------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETT---BCSSCSEEEE
T ss_pred             eCCCCceeeeeccCCCC-----------------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCc---cccCCceEEe
Confidence            99999988887 55554                 138899999999999999   799999999999   322 233332


Q ss_pred             -CCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcc-eeEecc--ccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         230 -IPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKP-CYKYKG--FAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       230 -~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~-~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                       .+...+.+++|+|++++|+ +|+.||.|++|++.+ +++ +..+..  |..+|++++|+|++.++++  .++.+++|++
T Consensus       264 ~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~-~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l  340 (402)
T 2aq5_A          264 LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS-EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKL  340 (402)
T ss_dssp             CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS-STTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred             ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC-CCcceEeecccccCCcccceEEeccccccee--cceeEEEEEc
Confidence             5677899999999999986 566899999999998 764 555554  4589999999999988775  5679999999


Q ss_pred             CCCceEE
Q psy8152         305 HSKKLLR  311 (444)
Q Consensus       305 ~~~~~~~  311 (444)
                      .++++..
T Consensus       341 ~~~~~~~  347 (402)
T 2aq5_A          341 HERKCEP  347 (402)
T ss_dssp             ETTEEEE
T ss_pred             CCCcEEE
Confidence            9876543

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=280.50  Aligned_cols=278  Identities=12%  Similarity=0.173  Sum_probs=231.3

Q ss_pred             CcccceEEEeeeccC---CcEEEEEEcCCeEEEEeCCC-Cccc-cceeeccccccEEEE--EeCCCeEEEEecCCcEEEE
Q psy8152          40 TNKASVLALNWGNVE---ESELLIAYSGQKIKIYDTDF-KNFN-TNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLW  112 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~---~~~l~~~~~d~~i~vw~~~~-~~~~-~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw  112 (444)
                      +|...|++++|+ |+   +.+|++|+.||.|+||++.+ +... ..+  .+|...|.++  +|++++|++++.||.|++|
T Consensus        37 ~h~~~v~~~~~~-~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw  113 (368)
T 3mmy_A           37 SPDDSIGCLSFS-PPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ--QMHTGPVLDVCWSDDGSKVFTASCDKTAKMW  113 (368)
T ss_dssp             CCSSCEEEEEEC-CTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE--EECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             CCCCceEEEEEc-CCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe--ccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence            899999999999 66   69999999999999999987 4443 333  4677777665  6789999999999999999


Q ss_pred             EcCCCCccccccccCCCeEEEEE--eccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         113 RYKTEPDQWTNFNVGPQLECMKH--NKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       113 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      ++.+++.+. ...|...|.+++|  +|++.+|++++.|+.|++||+++++++..+..+..                   +
T Consensus       114 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------------------~  173 (368)
T 3mmy_A          114 DLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER-------------------C  173 (368)
T ss_dssp             ETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC-------------------E
T ss_pred             EcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC-------------------c
Confidence            999988775 7789999999999  78999999999999999999999988888776554                   6


Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc-eEEE-eCCCCCeeEEEEccCCCE----EEEEcCCCcEEEEEcCCC
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP-VLKV-DIPDVALSCITTTNQSHY----VIVGSTTGDMMAVDLRGK  264 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~  264 (444)
                      .++.+.+  ..+++++.++.+++|+++   .... ...+ ..+...+.++++.+....    +++++.+|.|++|+++. 
T Consensus       174 ~~~~~~~--~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~-  247 (368)
T 3mmy_A          174 YCADVIY--PMAVVATAERGLIVYQLE---NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP-  247 (368)
T ss_dssp             EEEEEET--TEEEEEEGGGCEEEEECS---SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSC-
T ss_pred             eEEEecC--CeeEEEeCCCcEEEEEec---cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCC-
Confidence            7777765  588889999999999998   3222 2222 233455667777665544    99999999999999998 


Q ss_pred             C---cceeEeccccC------------ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCC
Q psy8152         265 G---KPCYKYKGFAG------------CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDF  328 (444)
Q Consensus       265 ~---~~~~~~~~h~~------------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~  328 (444)
                      .   ..+..+.+|..            +|++++|+|++++|++++.||.|++|++.+++++..+. |..+|.+++|+++ 
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~-  326 (368)
T 3mmy_A          248 PNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHN-  326 (368)
T ss_dssp             SCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTT-
T ss_pred             CCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCC-
Confidence            6   56778888776            79999999999999999999999999999999988876 7889999999854 


Q ss_pred             cccccchhhhhccccccCCCccccCCC
Q psy8152         329 SLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                              +.++++++.|+..+.|++.
T Consensus       327 --------g~~l~~~s~d~~~~~~~~~  345 (368)
T 3mmy_A          327 --------GNIFAYASSYDWSKGHEFY  345 (368)
T ss_dssp             --------SSCEEEEECCCSTTCGGGC
T ss_pred             --------CCeEEEEeccccccccccc
Confidence                    6789999988876666654

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-36  Score=278.06  Aligned_cols=247  Identities=11%  Similarity=0.112  Sum_probs=208.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC--CccccceeeccccccEEEEE--eC--CCeEEEEecCCcEEEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF--KNFNTNTDVSFGEGDIVGVS--RY--DECILTAVKSGDVKLWR  113 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~--~~~~~~~~~~~~~~~v~~~s--~~--~~~l~~~~~dg~i~iw~  113 (444)
                      +|...|++++|+ |++.+|++|+.||.|+||++..  ++....+  .+|...|.++.  ++  +++|++++.||.|++|+
T Consensus         9 ~h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd   85 (379)
T 3jrp_A            9 AHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   85 (379)
T ss_dssp             ECCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             CCcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeeeEe--cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence            899999999999 7999999999999999999984  4444444  47788887775  44  89999999999999999


Q ss_pred             cCCCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCc
Q psy8152         114 YKTEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       114 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      +.+++  .+..+..|...|.+++|+|+  +.+|++++.|+.|++||++.+.  ....+..+..                 
T Consensus        86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-----------------  148 (379)
T 3jrp_A           86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-----------------  148 (379)
T ss_dssp             EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-----------------
T ss_pred             cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-----------------
Confidence            99886  55566779999999999998  9999999999999999999863  3334445554                 


Q ss_pred             cceeEEEEec-------------CCCEEEEEeCCceEEEEEcCCCCC--ccceEEEeCCCCCeeEEEEccC---CCEEEE
Q psy8152         188 VWVNGISFLP-------------NSDKVAVCSKQGYVRVYDPKITTQ--RRPVLKVDIPDVALSCITTTNQ---SHYVIV  249 (444)
Q Consensus       188 ~~i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~i~~~~~~~~---~~~l~~  249 (444)
                       .|++++|+|             ++.+|++++.|+.|++||++ ...  ...+..+..|...|.+++|+|+   +++|++
T Consensus       149 -~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s  226 (379)
T 3jrp_A          149 -GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN-SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS  226 (379)
T ss_dssp             -CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE-TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred             -ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec-CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence             799999999             68999999999999999998 212  2355677889999999999999   899999


Q ss_pred             EcCCCcEEEEEcCCCCc-----ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         250 GSTTGDMMAVDLRGKGK-----PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~-----~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      ++.||.|++||++. +.     .+.....|...|++++|+|++++|++++.||.|++|++.....
T Consensus       227 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~  290 (379)
T 3jrp_A          227 VSQDRTCIIWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK  290 (379)
T ss_dssp             EETTSCEEEEEESS-TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTE
T ss_pred             EeCCCEEEEEeCCC-CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCc
Confidence            99999999999998 53     2222234888999999999999999999999999999986443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=8.5e-36  Score=279.16  Aligned_cols=285  Identities=11%  Similarity=0.076  Sum_probs=229.5

Q ss_pred             cceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCC-ccccc-eeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCC
Q psy8152          43 ASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFK-NFNTN-TDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        43 ~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~-~~~~~-~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      .....++++ |+.. ++++++.+|.|+||++... +.... ....+|...|.++  +| ++++|++|+.||.|++|++.+
T Consensus        35 ~~~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~  113 (402)
T 2aq5_A           35 WDSGFCAVN-PKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD  113 (402)
T ss_dssp             CSSCSEEEC-SSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred             cCCCcEEEC-CCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence            344567888 4444 3445788999999998653 22121 1234788888776  56 789999999999999999998


Q ss_pred             C-------CccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeee--ecccceeeEeeeCCCcccccC
Q psy8152         117 E-------PDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSA--KNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       117 ~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      +       +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.+..+  ..|..                
T Consensus       114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------  177 (402)
T 2aq5_A          114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD----------------  177 (402)
T ss_dssp             TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS----------------
T ss_pred             CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC----------------
Confidence            7       4555677899999999999987 79999999999999999999988888  56666                


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-eCCCCC-eeEEEEccCCCEEEEE---cCCCcEEEEEc
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-DIPDVA-LSCITTTNQSHYVIVG---STTGDMMAVDL  261 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~---~~dg~i~iwd~  261 (444)
                        .|++++|+|++++|++++.|+.|++||++   ....+..+ ..|... +.+++|+|++++|++|   +.++.|++||+
T Consensus       178 --~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~  252 (402)
T 2aq5_A          178 --TIYSVDWSRDGALICTSCRDKRVRVIEPR---KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT  252 (402)
T ss_dssp             --CEEEEEECTTSSCEEEEETTSEEEEEETT---TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred             --ceEEEEECCCCCEEEEEecCCcEEEEeCC---CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence              79999999999999999999999999999   77788887 677765 8999999999999999   89999999999


Q ss_pred             CCCCcc-eeEec-cccCceeEEEecCCCCEEEE-EECCCcEEEEEcCCCce-EEE---eecCCceeEEEEcCCCcccccc
Q psy8152         262 RGKGKP-CYKYK-GFAGCVKDIACPLNENLILS-VSLDRHFRVHDFHSKKL-LRK---DYMQSRLTSILVRSDFSLENET  334 (444)
Q Consensus       262 ~~~~~~-~~~~~-~h~~~i~~~~~s~~~~~l~s-~~~dg~i~vw~~~~~~~-~~~---~~~~~~i~~~~~~~~~~~~~~~  334 (444)
                      ++ ... +.... .|...|.+++|+|++++|++ ++.||.|++|++.+++. +..   ..+..++.+++|+++       
T Consensus       253 ~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~-------  324 (402)
T 2aq5_A          253 KH-LEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK-------  324 (402)
T ss_dssp             TB-CSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG-------
T ss_pred             cc-ccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc-------
Confidence            98 554 44443 57788999999999998875 45799999999999873 333   335688999999854       


Q ss_pred             hhhhhccccccCCCccccCCCcccccc
Q psy8152         335 KKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       335 ~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                        +.++++  .++.+++|++..+....
T Consensus       325 --~~~~~s--~~~~~~~~~l~~~~~~~  347 (402)
T 2aq5_A          325 --RGLEVN--KCEIARFYKLHERKCEP  347 (402)
T ss_dssp             --GGSCGG--GTEEEEEEEEETTEEEE
T ss_pred             --ccccee--cceeEEEEEcCCCcEEE
Confidence              456665  45689999998765443

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=4.9e-37  Score=277.70  Aligned_cols=244  Identities=11%  Similarity=0.051  Sum_probs=199.6

Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC--ccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP--DQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~  157 (444)
                      .+|...|.++  +|++++|++|+.|++|+|||+.++.  .+..+.+|..+|.+++|+|  ++++|++|+.|++|++||++
T Consensus        10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~   89 (316)
T 3bg1_A           10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE   89 (316)
T ss_dssp             ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred             ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence            4778888765  6889999999999999999998774  3445778999999999975  58999999999999999999


Q ss_pred             Cce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         158 TTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      +++  .+..+.+|..                  .|++++|+|+  +.+|++|+.|++|++|+++..........+.+|..
T Consensus        90 ~~~~~~~~~~~~h~~------------------~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~  151 (316)
T 3bg1_A           90 NGTWEKSHEHAGHDS------------------SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI  151 (316)
T ss_dssp             SSCCCEEEEECCCSS------------------CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred             CCcceEEEEccCCCC------------------ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence            863  5556666666                  7999999998  78999999999999999981111122344567888


Q ss_pred             CeeEEEEccC-----------------CCEEEEEcCCCcEEEEEcCCCC---cceeEeccccCceeEEEecCCC----CE
Q psy8152         234 ALSCITTTNQ-----------------SHYVIVGSTTGDMMAVDLRGKG---KPCYKYKGFAGCVKDIACPLNE----NL  289 (444)
Q Consensus       234 ~i~~~~~~~~-----------------~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~h~~~i~~~~~s~~~----~~  289 (444)
                      .|.+++|+|+                 +++|++|+.|+.|++||++. .   +++..+.+|...|++++|+|++    .+
T Consensus       152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~-~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~  230 (316)
T 3bg1_A          152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST  230 (316)
T ss_dssp             CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT-TSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred             CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC-CCccceeeecccCCCceEEEEecCCCCCCCce
Confidence            9999999997                 46899999999999999976 4   4677888999999999999986    79


Q ss_pred             EEEEECCCcEEEEEcCCC---ce-EEE-eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         290 ILSVSLDRHFRVHDFHSK---KL-LRK-DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~---~~-~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      |++++.|++|+||++.+.   .. ... ..|...|.+++|+++         +.++++++.|++|+||+..
T Consensus       231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~---------g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT---------ANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT---------TCCEEEEESSSCEEEEEEC
T ss_pred             EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC---------CCEEEEEcCCCeEEEEEEC
Confidence            999999999999999762   11 111 237888999998854         6789999999999999865

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.9e-35  Score=268.35  Aligned_cols=264  Identities=14%  Similarity=0.174  Sum_probs=222.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCc-EEEEEEcCCeEEEEeC-CCCcccccee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEES-ELLIAYSGQKIKIYDT-DFKNFNTNTD   82 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~-~~~~~~~~~~   82 (444)
                      ++.+|++|+.+|.|++|++..+... .....+  .+|...|++++|+ |++. +|++|+.||.|++|++ .+++. ..+ 
T Consensus        22 ~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~--~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~-   95 (342)
T 1yfq_A           22 SKSLLLITSWDGSLTVYKFDIQAKN-VDLLQS--LRYKHPLLCCNFI-DNTDLQIYVGTVQGEILKVDLIGSPSF-QAL-   95 (342)
T ss_dssp             GGTEEEEEETTSEEEEEEEETTTTE-EEEEEE--EECSSCEEEEEEE-ESSSEEEEEEETTSCEEEECSSSSSSE-EEC-
T ss_pred             CCCEEEEEcCCCeEEEEEeCCCCcc-ccceee--eecCCceEEEEEC-CCCCcEEEEEcCCCeEEEEEeccCCce-Eec-
Confidence            5678999999999999999877621 111222  2799999999999 7899 9999999999999999 87765 333 


Q ss_pred             ecc--ccccEEEE--EeCCCeEEEEecCCcEEEEEcCC---------CCccccccccCCCeEEEEEeccCCEEEEeeCCC
Q psy8152          83 VSF--GEGDIVGV--SRYDECILTAVKSGDVKLWRYKT---------EPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN  149 (444)
Q Consensus        83 ~~~--~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  149 (444)
                       ..  |...|.++  +| +++|++++.|+.|++|++.+         ++++. ...|...|.+++|+|++  |++++.++
T Consensus        96 -~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~--l~~~~~d~  170 (342)
T 1yfq_A           96 -TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN-NTKVKNKIFTMDTNSSR--LIVGMNNS  170 (342)
T ss_dssp             -BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS-SSSSCCCEEEEEECSSE--EEEEESTT
T ss_pred             -cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeee-EEeeCCceEEEEecCCc--EEEEeCCC
Confidence             35  77777665  56 89999999999999999987         77665 34499999999999876  99999999


Q ss_pred             eEEEEEcCC-ceee--eeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCc---
Q psy8152         150 DLKLWDLNT-TKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQR---  222 (444)
Q Consensus       150 ~i~vwd~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~---  222 (444)
                      .|++||+++ +...  .....+..                  .|.+++|+| ++++|++++.+|.|++|++.   ..   
T Consensus       171 ~i~i~d~~~~~~~~~~~~~~~~~~------------------~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~---~~~~~  229 (342)
T 1yfq_A          171 QVQWFRLPLCEDDNGTIEESGLKY------------------QIRDVALLPKEQEGYACSSIDGRVAVEFFD---DQGDD  229 (342)
T ss_dssp             EEEEEESSCCTTCCCEEEECSCSS------------------CEEEEEECSGGGCEEEEEETTSEEEEEECC---TTCCS
T ss_pred             eEEEEECCccccccceeeecCCCC------------------ceeEEEECCCCCCEEEEEecCCcEEEEEEc---CCCcc
Confidence            999999998 5432  22222333                  699999999 99999999999999999998   33   


Q ss_pred             ---cceEEEeCCCC---------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCE
Q psy8152         223 ---RPVLKVDIPDV---------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENL  289 (444)
Q Consensus       223 ---~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~  289 (444)
                         .....+..|..         .|.+++|+|++++|++++.||.|++||+.+ ++++..+.+| ..+|++++  |++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~--~~~~~  306 (342)
T 1yfq_A          230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKFNEDSVVKIA--CSDNI  306 (342)
T ss_dssp             TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred             cccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc-HhHhhhhhcccCCCceEec--CCCCe
Confidence               77778888765         899999999999999999999999999999 9999999998 99999999  99999


Q ss_pred             EEEEECCCc-EEEEE
Q psy8152         290 ILSVSLDRH-FRVHD  303 (444)
Q Consensus       290 l~s~~~dg~-i~vw~  303 (444)
                      |++++.||. .+.|.
T Consensus       307 l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          307 LCLATSDDTFKTNAA  321 (342)
T ss_dssp             EEEEEECTHHHHCSS
T ss_pred             EEEEecCCccccccc
Confidence            999999998 55555

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-36  Score=289.96  Aligned_cols=244  Identities=13%  Similarity=0.143  Sum_probs=197.7

Q ss_pred             CcccceEEEeeeccCC---------cEEEEE-------------------EcCCeEEEEeCCCCccccc--eeecccccc
Q psy8152          40 TNKASVLALNWGNVEE---------SELLIA-------------------YSGQKIKIYDTDFKNFNTN--TDVSFGEGD   89 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~---------~~l~~~-------------------~~d~~i~vw~~~~~~~~~~--~~~~~~~~~   89 (444)
                      .+.+.|.+|+|+ |++         ++||+|                   +.|++|+||++.+++....  .....|...
T Consensus       131 ~~~~~V~sv~w~-p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~  209 (524)
T 2j04_B          131 NVGGLVTDIAWL-NIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGE  209 (524)
T ss_dssp             ECCC--CCCSCE-EECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCS
T ss_pred             ECCCceeEEEec-ccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCc
Confidence            457899999999 454         667664                   4678999999987765321  122345666


Q ss_pred             EEEE--EeC------CCeEEEEecCCcEEEEEcCCCCcc-----------ccccccCCCeEEEEEeccCCEEEEeeCCCe
Q psy8152          90 IVGV--SRY------DECILTAVKSGDVKLWRYKTEPDQ-----------WTNFNVGPQLECMKHNKHSNIIATGGKEND  150 (444)
Q Consensus        90 v~~~--s~~------~~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  150 (444)
                      |.++  +|+      +.+||+++.||+|++|++..+...           ..+.+|...|++++|+++ ..|++|+.||+
T Consensus       210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~Dgt  288 (524)
T 2j04_B          210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGF  288 (524)
T ss_dssp             EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSE
T ss_pred             EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCE
Confidence            7655  554      469999999999999999876432           135678999999999985 48999999999


Q ss_pred             EEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEE--EEecCC-CEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152         151 LKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI--SFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       151 i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      |++||++++. +...+..|..                  .|++|  +|+|++ ++||+|+.|++|+|||++   ..+++.
T Consensus       289 V~lWD~~~~~~~~~~~~~H~~------------------~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~---~~~~~~  347 (524)
T 2j04_B          289 VAEFDLTDPEVPSFYDQVHDS------------------YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK---DIATTK  347 (524)
T ss_dssp             EEEEETTBCSSCSEEEECSSS------------------CEEEEEEECCTTSCCEEEEEETTSEEEEECGG---GHHHHC
T ss_pred             EEEEECCCCCCceEEeecccc------------------cEEEEEEEcCCCCCeEEEEeccCCeEEEEECC---CCCccc
Confidence            9999999763 4455677776                  79999  578887 899999999999999999   666666


Q ss_pred             EEeCCCC--CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         227 KVDIPDV--ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       227 ~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+.+|..  .|.+++|+|+++.|++++.|++|++||+++ +.++.++.+|.+.|++|+|+|++++|++|+.||+|++|++
T Consensus       348 ~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~  426 (524)
T 2j04_B          348 TTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA  426 (524)
T ss_dssp             EEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred             ccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence            6665543  588999999999999999999999999999 8888999999999999999999999999999999999998


Q ss_pred             CCC
Q psy8152         305 HSK  307 (444)
Q Consensus       305 ~~~  307 (444)
                      ..+
T Consensus       427 ~~~  429 (524)
T 2j04_B          427 ARR  429 (524)
T ss_dssp             CSS
T ss_pred             hHh
Confidence            654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=6.3e-35  Score=275.47  Aligned_cols=251  Identities=16%  Similarity=0.182  Sum_probs=210.0

Q ss_pred             eeecccCcccceEEEeeeccC-CcEEEEEEcCCeEEEEeCCC----------CccccceeeccccccEEE--EEeCCC-e
Q psy8152          34 QNVKYITNKASVLALNWGNVE-ESELLIAYSGQKIKIYDTDF----------KNFNTNTDVSFGEGDIVG--VSRYDE-C   99 (444)
Q Consensus        34 ~~~~~~~h~~~v~~~~~~~~~-~~~l~~~~~d~~i~vw~~~~----------~~~~~~~~~~~~~~~v~~--~s~~~~-~   99 (444)
                      .......|.+.|++++|+ |+ +.+|++++.+|.|++|++.+          ......+  .+|...+.+  ++|++. +
T Consensus       120 ~~~~~~~h~~~v~~l~~~-p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~  196 (430)
T 2xyi_A          120 EIEIKINHEGEVNRARYM-PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL--RGHQKEGYGLSWNPNLNGY  196 (430)
T ss_dssp             EEEEEEEESSCCSEEEEE-TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE--ECCSSCCCCEEECTTSTTE
T ss_pred             EEEEEEcCCCcEEEEEEC-CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe--cCCCCCeEEEEeCCCCCCe
Confidence            334444899999999999 55 78999999999999999976          3444444  466666655  467777 9


Q ss_pred             EEEEecCCcEEEEEcCCCCc-------cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc---eeeeeeecc
Q psy8152         100 ILTAVKSGDVKLWRYKTEPD-------QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT---KNIFSAKNV  168 (444)
Q Consensus       100 l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~  168 (444)
                      |++|+.+|.|++|++..+..       ...+..|...|.+++|+| ++.+|++++.++.|++||++++   +++..+..|
T Consensus       197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~  276 (430)
T 2xyi_A          197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH  276 (430)
T ss_dssp             EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred             EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence            99999999999999987432       224557999999999999 7889999999999999999986   466666666


Q ss_pred             cceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC-E
Q psy8152         169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH-Y  246 (444)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~  246 (444)
                      ..                  .|++++|+|++. +|++|+.||.|++||++  ....++..+..|...|++++|+|+++ +
T Consensus       277 ~~------------------~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~--~~~~~~~~~~~h~~~v~~i~~sp~~~~~  336 (430)
T 2xyi_A          277 TA------------------EVNCLSFNPYSEFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETI  336 (430)
T ss_dssp             SS------------------CEEEEEECSSCTTEEEEEETTSEEEEEETT--CTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred             CC------------------CeEEEEeCCCCCCEEEEEeCCCeEEEEeCC--CCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence            65                  799999999985 78999999999999999  22567888899999999999999984 6


Q ss_pred             EEEEcCCCcEEEEEcCCCC-------------cceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCC
Q psy8152         247 VIVGSTTGDMMAVDLRGKG-------------KPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~-------------~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~  307 (444)
                      |++++.||.|+|||+...+             .++..+.+|...|++++|+|+++ +|++++.||.|+||++...
T Consensus       337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            8999999999999998611             56677778999999999999998 9999999999999999764

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=3.4e-35  Score=278.97  Aligned_cols=285  Identities=12%  Similarity=0.123  Sum_probs=214.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCcc-------ceeeeeeecccCcc------------cceEEEeeeccCC--cEEEEEE
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKC-------IIKNIQNVKYITNK------------ASVLALNWGNVEE--SELLIAY   62 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~-------~~~~~~~~~~~~h~------------~~v~~~~~~~~~~--~~l~~~~   62 (444)
                      +++.+|++|+.||.|++|++.+++.       .......+.  +|.            ..|++++|+ |++  .+|++++
T Consensus        38 ~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~V~~l~~~-~~~~~~~l~s~s  114 (447)
T 3dw8_B           38 HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ--SHEPEFDYLKSLEIEEKINKIRWL-PQKNAAQFLLST  114 (447)
T ss_dssp             SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE--CCCCEEEGGGTEEECCCCCEEEEC-CCCSSSEEEEEE
T ss_pred             CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc--cccccccccccccccCceEEEEEc-CCCCcceEEEeC
Confidence            4678999999999999999987652       011122222  787            889999999 676  7999999


Q ss_pred             cCCeEEEEeCCCCccccc--------------------------------------eeeccccccEEE--EEeCCCeEEE
Q psy8152          63 SGQKIKIYDTDFKNFNTN--------------------------------------TDVSFGEGDIVG--VSRYDECILT  102 (444)
Q Consensus        63 ~d~~i~vw~~~~~~~~~~--------------------------------------~~~~~~~~~v~~--~s~~~~~l~~  102 (444)
                      .|+.|++|++.++.....                                      ....+|...|.+  ++|++++|++
T Consensus       115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  194 (447)
T 3dw8_B          115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS  194 (447)
T ss_dssp             CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE
T ss_pred             CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE
Confidence            999999999876443110                                      112356666655  4688999999


Q ss_pred             EecCCcEEEEEcCC-CCccc-------cccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCcee----eeeeeccc
Q psy8152         103 AVKSGDVKLWRYKT-EPDQW-------TNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKN----IFSAKNVS  169 (444)
Q Consensus       103 ~~~dg~i~iw~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~  169 (444)
                      | .|+.|++||+.+ ++...       .+..|...|++++|+|++ ++|++|+.||.|++||+++++.    +..+..+.
T Consensus       195 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  273 (447)
T 3dw8_B          195 A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE  273 (447)
T ss_dssp             E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-
T ss_pred             e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC
Confidence            8 899999999984 33332       255799999999999988 9999999999999999998775    55555543


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC-ccceEEEeCCCCC--------------
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ-RRPVLKVDIPDVA--------------  234 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~--------------  234 (444)
                      ....      ......+...|++++|+|++++|++++. +.|++||++   . ..++..+..|...              
T Consensus       274 ~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~i~  343 (447)
T 3dw8_B          274 DPSN------RSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN---MENRPVETYQVHEYLRSKLCSLYENDCIF  343 (447)
T ss_dssp             ----------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT---CCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred             Cccc------cccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC---CCccccceeeccccccccccccccccccc
Confidence            2000      0000001125999999999999999999 999999998   4 6777778877532              


Q ss_pred             -eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec---------------------------------cccCceeE
Q psy8152         235 -LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK---------------------------------GFAGCVKD  280 (444)
Q Consensus       235 -i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------------------~h~~~i~~  280 (444)
                       +..++|+|++++|++|+.||.|++||+.+ ++.+. +.                                 .+...|..
T Consensus       344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  421 (447)
T 3dw8_B          344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNT-KRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH  421 (447)
T ss_dssp             CCCCEEECTTSSEEEEECSTTEEEEEETTT-CCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred             cceEEEECCCCCEEEEeccCCEEEEEEcCC-Cccee-eeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence             23499999999999999999999999998 66542 22                                 23457889


Q ss_pred             EEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         281 IACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       281 ~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ++|+|++++||+++.++ +++|..+
T Consensus       422 ~~~~p~~~~la~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          422 TAWHPKENIIAVATTNN-LYIFQDK  445 (447)
T ss_dssp             EEECSSSSEEEEECSSC-EEEEECC
T ss_pred             EEECCCCCEEEEEecce-eeeeccc
Confidence            99999999999988776 7788643

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-34  Score=273.47  Aligned_cols=280  Identities=11%  Similarity=0.030  Sum_probs=225.7

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccceeec----------------------------------
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTNTDVS----------------------------------   84 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~----------------------------------   84 (444)
                      ..++.+++|+ +++++|+++ .++.|++|++.+++   .+..+..+                                  
T Consensus         4 ~~p~~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (450)
T 2vdu_B            4 IHPLQNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG   81 (450)
T ss_dssp             ECCCCEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred             cccEEEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence            4678999999 788866655 57899999999888   44443311                                  


Q ss_pred             ------------------cccccEEEE--EeCCCeE-EEEecCCcEEEEEcC--CCCcccccc--ccCCCeEEEEEeccC
Q psy8152          85 ------------------FGEGDIVGV--SRYDECI-LTAVKSGDVKLWRYK--TEPDQWTNF--NVGPQLECMKHNKHS  139 (444)
Q Consensus        85 ------------------~~~~~v~~~--s~~~~~l-~~~~~dg~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~  139 (444)
                                        .|...|.++  +|++++| ++++.||.|++|++.  +++.+..+.  .|...|.+++|+|++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~  161 (450)
T 2vdu_B           82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD  161 (450)
T ss_dssp             ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred             ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence                              122246554  7889986 889999999999999  787776554  567899999999999


Q ss_pred             CEEEEeeCCCeEEEEEcCCceeee----eeecccceeeEeeeCCCcccccCccceeEEEEecC---CCEEEEEeCCceEE
Q psy8152         140 NIIATGGKENDLKLWDLNTTKNIF----SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN---SDKVAVCSKQGYVR  212 (444)
Q Consensus       140 ~~l~~~~~d~~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~  212 (444)
                      ++|++|+.+|.|++|++.+++...    .+.+|..                  .|++++|+|+   +++|++++.|+.|+
T Consensus       162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~------------------~v~~~~~sp~~~~~~~l~s~~~d~~i~  223 (450)
T 2vdu_B          162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVS------------------MLTDVHLIKDSDGHQFIITSDRDEHIK  223 (450)
T ss_dssp             SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSS------------------CEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred             CEEEEEeCCCcEEEEecCCcccccccceeeecccC------------------ceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence            999999999999999998866443    5555655                  7999999999   89999999999999


Q ss_pred             EEEcCCCCCccceEE-EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-----------------
Q psy8152         213 VYDPKITTQRRPVLK-VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-----------------  274 (444)
Q Consensus       213 i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-----------------  274 (444)
                      +||++   ....+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++ ++++..+..+                 
T Consensus       224 vwd~~---~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (450)
T 2vdu_B          224 ISHYP---QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRF  298 (450)
T ss_dssp             EEEES---CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----
T ss_pred             EEECC---CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccc
Confidence            99999   6667766 45899999999999 999999999999999999999 8888887632                 


Q ss_pred             --------cCceeEEEecCCCCEEEEEE-CCCcEEEEEc--CCC---ceEEEeecCCceeEEEEcCCCcccccchhhhhc
Q psy8152         275 --------AGCVKDIACPLNENLILSVS-LDRHFRVHDF--HSK---KLLRKDYMQSRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       275 --------~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~--~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                              ...|.+++|+|++++|++++ .++.|+||++  ..+   +++..+.....+.+++|.++         +.++
T Consensus       299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~---------~~~v  369 (450)
T 2vdu_B          299 QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHND---------EFQV  369 (450)
T ss_dssp             ------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETT---------EEEE
T ss_pred             cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCC---------cEEE
Confidence                    35689999999999999999 8999999999  555   55666665588999999864         2233


Q ss_pred             ccccc------CCCccccCCC
Q psy8152         341 HSEEK------GDSDEKYDPE  355 (444)
Q Consensus       341 ~s~~~------d~~i~~W~~~  355 (444)
                      +.++.      ++.|++|.+.
T Consensus       370 ~~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          370 TLDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             EECCTTCCSSCCCSEEEEEEE
T ss_pred             EEecccCCCCCCcceEEEEEE
Confidence            33332      5567888765

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-35  Score=271.09  Aligned_cols=250  Identities=13%  Similarity=0.101  Sum_probs=210.4

Q ss_pred             cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeEEEEEecc--CCEEEEeeCCCe
Q psy8152          77 FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLECMKHNKH--SNIIATGGKEND  150 (444)
Q Consensus        77 ~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~  150 (444)
                      ++..+.  +|...|.++  +|++++|++++.||.|++|++.  +++.+..+..|...|++++|+|+  +++|++++.||.
T Consensus         3 ~~~~~~--~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~   80 (379)
T 3jrp_A            3 MVVIAN--AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK   80 (379)
T ss_dssp             --CCEE--ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred             ccEEec--CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence            344454  677777665  6889999999999999999998  45555567789999999999876  999999999999


Q ss_pred             EEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152         151 LKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVL  226 (444)
Q Consensus       151 i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~  226 (444)
                      |++||+.+++  .+..+..+..                  .|++++|+|+  +.+|++++.|+.|++||++ ........
T Consensus        81 v~iwd~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~  141 (379)
T 3jrp_A           81 VLIWKEENGRWSQIAVHAVHSA------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFK-ENGTTSPI  141 (379)
T ss_dssp             EEEEEEETTEEEEEEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECC-TTSCCCEE
T ss_pred             EEEEEcCCCceeEeeeecCCCc------------------ceEEEEeCCCCCCCEEEEecCCCcEEEEecC-CCCceeeE
Confidence            9999999986  6666666665                  7999999999  8999999999999999999 33345566


Q ss_pred             EEeCCCCCeeEEEEcc-------------CCCEEEEEcCCCcEEEEEcCCCCc----ceeEeccccCceeEEEecCC---
Q psy8152         227 KVDIPDVALSCITTTN-------------QSHYVIVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVKDIACPLN---  286 (444)
Q Consensus       227 ~~~~~~~~i~~~~~~~-------------~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~~~~~s~~---  286 (444)
                      .+..|...|.+++|+|             ++.+|++++.||.|++||++. +.    ++..+.+|...|++++|+|+   
T Consensus       142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~~~~  220 (379)
T 3jrp_A          142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLL  220 (379)
T ss_dssp             EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred             EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecC-CCcceeeEEEEecccCcEeEEEECCCCCC
Confidence            7788999999999999             699999999999999999987 54    44677789999999999999   


Q ss_pred             CCEEEEEECCCcEEEEEcCCCc---eEEEe---ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         287 ENLILSVSLDRHFRVHDFHSKK---LLRKD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       287 ~~~l~s~~~dg~i~vw~~~~~~---~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                      +++|++++.||.|++|++.++.   .....   .+...|.+++|+++         +.++++++.|+.|++|++...
T Consensus       221 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          221 RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEESSSSEEEEEEEET
T ss_pred             CCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCC---------CCEEEEecCCCcEEEEeCCCC
Confidence            8999999999999999999864   11111   27778999998854         578999999999999998843

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.1e-35  Score=267.80  Aligned_cols=275  Identities=11%  Similarity=0.098  Sum_probs=214.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~  118 (444)
                      .|...|++++|+ |++.+|++|+.+ .++||++.+++......  .+...+.++.+.++.+ ++++.+++|++||+.+++
T Consensus        17 ~h~~~V~~v~fs-~dg~~la~g~~~-~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~   92 (355)
T 3vu4_A           17 HVSNPVTDYEFN-QDQSCLILSTLK-SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ   92 (355)
T ss_dssp             --CCCCCEEEEC-TTSSEEEEECSS-EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred             cCCCceEEEEEC-CCCCEEEEEcCC-EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence            799999999999 799999998876 57899998776655433  2345667777887776 567778999999999998


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      ++. ...+...|.+++|+++.  ++++ .++.|++||+.++ +.+..+..  .                   ...+++++
T Consensus        93 ~~~-~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~-------------------~~~~~~s~  147 (355)
T 3vu4_A           93 DVS-RIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--F-------------------GGVCEFSN  147 (355)
T ss_dssp             EEE-EEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--E-------------------EEEEEEET
T ss_pred             EEE-EEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--C-------------------CceEEEEc
Confidence            886 44577899999998753  4444 3789999999987 66655543  1                   33455666


Q ss_pred             CCCEEEE--EeCCceEEEEEcCCCCCcc---------------c-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCc-EEE
Q psy8152         198 NSDKVAV--CSKQGYVRVYDPKITTQRR---------------P-VLKVDIPDVALSCITTTNQSHYVIVGSTTGD-MMA  258 (444)
Q Consensus       198 ~~~~l~~--~~~d~~i~i~d~~~~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i  258 (444)
                        .++++  |+.+|.|++||+.   ...               + +..+.+|...|++++|+|++++|++|+.|++ |+|
T Consensus       148 --~~la~~sg~~~g~v~iwd~~---~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i  222 (355)
T 3vu4_A          148 --GLLVYSNEFNLGQIHITKLQ---SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV  222 (355)
T ss_dssp             --TEEEEEESSCTTCEEEEECC---C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred             --cEEEEeCCCcCcEEEEEECC---CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence              56665  6899999999998   322               2 7788999999999999999999999999998 999


Q ss_pred             EEcCCCCcceeEec-c-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec---------------------
Q psy8152         259 VDLRGKGKPCYKYK-G-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM---------------------  315 (444)
Q Consensus       259 wd~~~~~~~~~~~~-~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~---------------------  315 (444)
                      ||+++ ++++.++. + |...|++++|+|++++|++++.|++|++|++..+........                     
T Consensus       223 wd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (355)
T 3vu4_A          223 FKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS  301 (355)
T ss_dssp             EETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred             EECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence            99999 99999998 5 999999999999999999999999999999976532111110                     


Q ss_pred             ---CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         316 ---QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       316 ---~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                         ..+...++|+         +++..+++++.||.+++|++....
T Consensus       302 ~~~~~~~~~~a~~---------~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          302 VDKHVRGCKIAWI---------SESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             CCTTCCCCEEEES---------SSSEEEEEETTTTEEEEEEEEEET
T ss_pred             cCCCCCceEEEEe---------CCCCEEEEEeCCCeEEEEEEEcCC
Confidence               1112445555         446789999999999999877543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=4.1e-33  Score=259.95  Aligned_cols=318  Identities=13%  Similarity=0.081  Sum_probs=243.1

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCccccceeec
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +..+++++.++.|++|++.+++.    +..+   .+...+.+++|+ |++.+| ++++.++.|++||+.+++.+..+..+
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~~----~~~~---~~~~~~~~~~~s-~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~   73 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNKV----TATI---PVGSNPMGAVIS-PDGTKVYVANAHSNDVSIIDTATNNVIATVPAG   73 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEE----EEEE---ECSSSEEEEEEC-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred             CEEEEEcCCCCEEEEEECCCCeE----EEEe---ecCCCcceEEEC-CCCCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence            45788999999999999988764    1222   234568999999 788876 56778999999999999988877532


Q ss_pred             cccccEEEEEeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE-EEeeCCCeEEEEEcCCceee
Q psy8152          85 FGEGDIVGVSRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII-ATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~  162 (444)
                      . .....+++|++++|+++ +.++.|++||+.+++.+. ...+...+.+++|+|+++.| ++++.++.|++||+.+++.+
T Consensus        74 ~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  151 (391)
T 1l0q_A           74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI  151 (391)
T ss_dssp             S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             C-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE-EEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence            2 33345567889987554 467999999999988875 44456678999999999877 68888999999999999888


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE-EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV-AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      ..+..+..                   +.+++|+|++++| ++++.++.|++||++   ....+..+. +...+.+++|+
T Consensus       152 ~~~~~~~~-------------------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~  208 (391)
T 1l0q_A          152 NTVSVGRS-------------------PKGIAVTPDGTKVYVANFDSMSISVIDTV---TNSVIDTVK-VEAAPSGIAVN  208 (391)
T ss_dssp             EEEECCSS-------------------EEEEEECTTSSEEEEEETTTTEEEEEETT---TTEEEEEEE-CSSEEEEEEEC
T ss_pred             EEEecCCC-------------------cceEEECCCCCEEEEEeCCCCEEEEEECC---CCeEEEEEe-cCCCccceEEC
Confidence            87766554                   7999999999877 677889999999999   666666655 45578999999


Q ss_pred             cCCCEEEEEc---CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE-EEEECCCcEEEEEcCCCceEEEeecC-
Q psy8152         242 NQSHYVIVGS---TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI-LSVSLDRHFRVHDFHSKKLLRKDYMQ-  316 (444)
Q Consensus       242 ~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l-~s~~~dg~i~vw~~~~~~~~~~~~~~-  316 (444)
                      |++++|++++   .++.|++||+.+ ++++..+..|. .+.+++|+|++++| ++++.++.|++||+.+++++..+... 
T Consensus       209 ~~g~~l~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~  286 (391)
T 1l0q_A          209 PEGTKAYVTNVDKYFNTVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGK  286 (391)
T ss_dssp             TTSSEEEEEEECSSCCEEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred             CCCCEEEEEecCcCCCcEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence            9999999887   689999999999 88888888765 57899999999877 66688999999999999988877522 


Q ss_pred             Ccee---EEEEcC--------CCcccc---cchhh--hhccccccCCCccccCCCccc
Q psy8152         317 SRLT---SILVRS--------DFSLEN---ETKKE--EQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       317 ~~i~---~~~~~~--------~~~~~~---~~~~~--~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      .+..   .+.+.+        .|+...   ..+..  ..+.+.+.+...++|++..+.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~  344 (391)
T 1l0q_A          287 NPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS  344 (391)
T ss_dssp             SEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred             CCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence            2211   122221        111000   00111  345566778889999987654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.5e-34  Score=265.51  Aligned_cols=272  Identities=12%  Similarity=0.122  Sum_probs=217.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +.+|++|+.+|.|++|++.+.....  ...+.  +|...|++++|+ |++.+|++++.||.|++|++.+++.....   .
T Consensus        54 g~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~--~h~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~  125 (368)
T 3mmy_A           54 GNFLIAGSWANDVRCWEVQDSGQTI--PKAQQ--MHTGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQIA---Q  125 (368)
T ss_dssp             SEEEEEEETTSEEEEEEECTTSCEE--EEEEE--ECSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE---E
T ss_pred             ceEEEEECCCCcEEEEEcCCCCcee--EEEec--cccCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceeec---c
Confidence            5899999999999999998733211  11222  799999999999 79999999999999999999988876643   5


Q ss_pred             ccccEEEE----EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          86 GEGDIVGV----SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        86 ~~~~v~~~----s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      |...|.++    ++++.+|++++.|+.|++||+.+++.+..+.. ...+.++.+.  ...+++++.++.+++|++.....
T Consensus       126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~  202 (368)
T 3mmy_A          126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL-PERCYCADVI--YPMAVVATAERGLIVYQLENQPS  202 (368)
T ss_dssp             CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC-SSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCE
T ss_pred             ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec-CCCceEEEec--CCeeEEEeCCCcEEEEEeccccc
Confidence            67777665    45778899999999999999999988864444 4466666665  45888899999999999987554


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE----EEEEeCCceEEEEEcCCCCCc-cceEEEeCCCC---
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK----VAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDV---  233 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~---  233 (444)
                      .........                ...+.++++.+....    +++++.|+.|++|+++ .... ..+..+..|..   
T Consensus       203 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~~~~~  265 (368)
T 3mmy_A          203 EFRRIESPL----------------KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-PPNPAKDNFTFKCHRSNGT  265 (368)
T ss_dssp             EEEECCCSC----------------SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS-CSCHHHHSEEEECSEEC--
T ss_pred             hhhhccccc----------------cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC-CCCccccceeeeeeecccc
Confidence            333221111                124666666665543    9999999999999999 2222 66777887765   


Q ss_pred             ---------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         234 ---------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       234 ---------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                               .|++++|+|++++|++++.||.|++||+.+ ++++..+.+|..+|++++|+|++++|++++.|+..+.|++
T Consensus       266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred             cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence                     699999999999999999999999999999 9999999999999999999999999999999986666555


Q ss_pred             CC
Q psy8152         305 HS  306 (444)
Q Consensus       305 ~~  306 (444)
                      ..
T Consensus       345 ~~  346 (368)
T 3mmy_A          345 YN  346 (368)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8e-35  Score=266.49  Aligned_cols=265  Identities=9%  Similarity=0.029  Sum_probs=198.3

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC---------CCCccc
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK---------TEPDQW  121 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~---------~~~~~~  121 (444)
                      +++.+|++|+.||.|++||+.+++.+..+.    ...|.++  +|.   +++++.|++|++|+..         +++.+.
T Consensus        46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~  118 (343)
T 3lrv_A           46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR  118 (343)
T ss_dssp             EEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred             CCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence            467888888888999999988888776664    2233332  343   8888888888888654         444333


Q ss_pred             -cccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         122 -TNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       122 -~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                       ....|..+|.+++|+|  ++++|++++.||.|++||+++++.+.....+..                 ..|++++|+|+
T Consensus       119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-----------------~~i~~~~~~pd  181 (343)
T 3lrv_A          119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD-----------------VEYSSGVLHKD  181 (343)
T ss_dssp             EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS-----------------CCCCEEEECTT
T ss_pred             EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC-----------------CceEEEEECCC
Confidence             2335778899999999  999999999999999999999887655433221                 25999999999


Q ss_pred             CCEEEEEeCCceEEEEEcCCCCCccce-EEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc---
Q psy8152         199 SDKVAVCSKQGYVRVYDPKITTQRRPV-LKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG---  273 (444)
Q Consensus       199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---  273 (444)
                      +.+|++|+.||.|++||++   ....+ ..+.. |..+|++++|+|++.+|++++ ++.|++||+++ .+.+..+..   
T Consensus       182 g~~lasg~~dg~i~iwd~~---~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~-~~~~~~~~~~~~  256 (343)
T 3lrv_A          182 SLLLALYSPDGILDVYNLS---SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK-DVGTLAYPTYTI  256 (343)
T ss_dssp             SCEEEEECTTSCEEEEESS---CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS-STTCBSSCCCBC
T ss_pred             CCEEEEEcCCCEEEEEECC---CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC-CCcceeeccccc
Confidence            9999999999999999999   55655 67777 999999999999999999999 55999999999 777666553   


Q ss_pred             ccCcee--EEEecCCCCEEEEEEC-CCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         274 FAGCVK--DIACPLNENLILSVSL-DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       274 h~~~i~--~~~~s~~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                      |...+.  +++|+|++++|++++. ++.|+||++.........   .++..+.|.+.-      .+...+++++.|+.+.
T Consensus       257 ~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~l~~~~~d~~~~  327 (343)
T 3lrv_A          257 PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDT------ADFTDMDVVCGDGGIA  327 (343)
T ss_dssp             -----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----------CCCCEEEEEEETTEEE
T ss_pred             ccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccc------cccceeEEEecCCceE
Confidence            444444  5999999999999998 999999999765433222   344455544310      1345677788888888


Q ss_pred             ccCCC
Q psy8152         351 KYDPE  355 (444)
Q Consensus       351 ~W~~~  355 (444)
                      ++-..
T Consensus       328 ~~~~~  332 (343)
T 3lrv_A          328 AILKT  332 (343)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            77433

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=3.6e-34  Score=270.32  Aligned_cols=247  Identities=15%  Similarity=0.187  Sum_probs=204.6

Q ss_pred             ccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCC----------CCccccccccCCCeEEEEEeccCC-EEEEeeCCC
Q psy8152          84 SFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKT----------EPDQWTNFNVGPQLECMKHNKHSN-IIATGGKEN  149 (444)
Q Consensus        84 ~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~  149 (444)
                      ..|...|.++  +|+ +.+|++++.+|.|++|++.+          ......+..|...|.+++|+|++. +|++|+.||
T Consensus       125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg  204 (430)
T 2xyi_A          125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH  204 (430)
T ss_dssp             EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred             EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence            3566666554  675 67899999999999999986          455556778999999999999877 999999999


Q ss_pred             eEEEEEcCCcee-------eeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCC
Q psy8152         150 DLKLWDLNTTKN-------IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQ  221 (444)
Q Consensus       150 ~i~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~  221 (444)
                      .|++|++..+..       ...+..|..                  .|.+++|+| ++.+|++++.|+.|++||++....
T Consensus       205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~  266 (430)
T 2xyi_A          205 TICLWDINATPKEHRVIDAKNIFTGHTA------------------VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT  266 (430)
T ss_dssp             CEEEEETTSCCBGGGEEECSEEECCCSS------------------CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred             eEEEEeCCCCCCCCceeccceeecCCCC------------------CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence            999999987322       233334444                  799999999 568999999999999999992222


Q ss_pred             ccceEEEeCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEEECCCcE
Q psy8152         222 RRPVLKVDIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHF  299 (444)
Q Consensus       222 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i  299 (444)
                      ..++..+..|...|++++|+|++. +|++|+.||.|++||++....++..+.+|...|++++|+|+++ +|++++.|+.|
T Consensus       267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i  346 (430)
T 2xyi_A          267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL  346 (430)
T ss_dssp             SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred             CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence            367788889999999999999887 6889999999999999984577899999999999999999985 79999999999


Q ss_pred             EEEEcCC--------------CceEEEee-cCCceeEEEEcCCCcccccchhhh-hccccccCCCccccCCCcc
Q psy8152         300 RVHDFHS--------------KKLLRKDY-MQSRLTSILVRSDFSLENETKKEE-QEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       300 ~vw~~~~--------------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~i~~W~~~~~  357 (444)
                      +||++..              .+++.... |...|.+++|+++         +. ++++++.|+.|++|++...
T Consensus       347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---------~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---------EPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEECHH
T ss_pred             EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCC---------CCCEEEEEECCCCEEEeEcccc
Confidence            9999987              24444443 7788999999865         34 7899999999999998743

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.7e-34  Score=263.02  Aligned_cols=246  Identities=14%  Similarity=0.173  Sum_probs=206.4

Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC----ccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEE
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP----DQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWD  155 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd  155 (444)
                      .+|...|.++  +|++++|++++.||.|++|++.++.    ....+..|...|.+++|+|  ++.+|++++.||.|++||
T Consensus         8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd   87 (351)
T 3f3f_A            8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE   87 (351)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence            4788888776  6789999999999999999998764    3335567999999999999  699999999999999999


Q ss_pred             cCCc---------eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152         156 LNTT---------KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRP  224 (444)
Q Consensus       156 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~  224 (444)
                      +..+         +++..+..+..                  .|.+++|+|+  +.+|++++.|+.|++||++   ....
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~  146 (351)
T 3f3f_A           88 EDPDQEECSGRRWNKLCTLNDSKG------------------SLYSVKFAPAHLGLKLACLGNDGILRLYDAL---EPSD  146 (351)
T ss_dssp             ECTTSCTTSSCSEEEEEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTCEEEEEECS---STTC
T ss_pred             cCCCcccccccCcceeeeecccCC------------------ceeEEEEcCCCCCcEEEEecCCCcEEEecCC---ChHH
Confidence            9886         45666666655                  7999999999  9999999999999999998   3332


Q ss_pred             eEEE-------------eCCCCCeeEEEEccC---CCEEEEEcCCCcEEEEEcCCCCcc--eeEeccccCceeEEEecCC
Q psy8152         225 VLKV-------------DIPDVALSCITTTNQ---SHYVIVGSTTGDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       225 ~~~~-------------~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~  286 (444)
                      +..+             ..+...+.+++|+|+   +.+|++++.++.+.+|+... ++.  +..+.+|...|++++|+|+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~  225 (351)
T 3f3f_A          147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPS  225 (351)
T ss_dssp             TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCEEEEEECCC
T ss_pred             hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCC-CceeeeeecCCCCcceeEEEECCC
Confidence            2221             156778999999997   89999999999998888776 654  6778899999999999999


Q ss_pred             C----CEEEEEECCCcEEEEEcCCC----------------------------------------------ceEEEee-c
Q psy8152         287 E----NLILSVSLDRHFRVHDFHSK----------------------------------------------KLLRKDY-M  315 (444)
Q Consensus       287 ~----~~l~s~~~dg~i~vw~~~~~----------------------------------------------~~~~~~~-~  315 (444)
                      +    ++|++++.||.|++|++..+                                              +++..+. |
T Consensus       226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  305 (351)
T 3f3f_A          226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH  305 (351)
T ss_dssp             SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred             CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence            8    89999999999999999874                                              3444444 7


Q ss_pred             CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      ...|++++|+++         +.++++++.|+.|++|++..++..
T Consensus       306 ~~~v~~~~~s~~---------~~~l~s~~~dg~v~iw~~~~~~~~  341 (351)
T 3f3f_A          306 NGEVWSVSWNLT---------GTILSSAGDDGKVRLWKATYSNEF  341 (351)
T ss_dssp             SSCEEEEEECSS---------SCCEEEEETTSCEEEEEECTTSCE
T ss_pred             cccEEEEEEcCC---------CCEEEEecCCCcEEEEecCcCcch
Confidence            889999999854         578999999999999999865443

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-34  Score=291.45  Aligned_cols=248  Identities=10%  Similarity=0.113  Sum_probs=208.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE--eC--CCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS--RY--DECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s--~~--~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|.+.|++++|+ |++++|++|+.||.|+||++.++.........+|..+|.++.  ++  +++|++|+.||.|++|++.
T Consensus         7 gH~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~   85 (753)
T 3jro_A            7 AHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE   85 (753)
T ss_dssp             -CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred             cCcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence            899999999999 799999999999999999998443333333457888887774  55  8899999999999999999


Q ss_pred             CCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         116 TEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       116 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      +++  .+..+..|...|.+++|+|+  +++|++|+.||.|++||++++.  ....+..+..                  .
T Consensus        86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~------------------~  147 (753)
T 3jro_A           86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI------------------G  147 (753)
T ss_dssp             TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS------------------C
T ss_pred             CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC------------------c
Confidence            886  55567779999999999998  9999999999999999998863  3334445554                  7


Q ss_pred             eeEEEEec-------------CCCEEEEEeCCceEEEEEcCCCC-CccceEEEeCCCCCeeEEEEccC---CCEEEEEcC
Q psy8152         190 VNGISFLP-------------NSDKVAVCSKQGYVRVYDPKITT-QRRPVLKVDIPDVALSCITTTNQ---SHYVIVGST  252 (444)
Q Consensus       190 i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~  252 (444)
                      |++++|+|             ++.+|++|+.||.|++||++... ...+...+.+|...|++++|+|+   +++|++|+.
T Consensus       148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~  227 (753)
T 3jro_A          148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ  227 (753)
T ss_dssp             EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred             eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence            99999999             58999999999999999998111 11556678899999999999999   899999999


Q ss_pred             CCcEEEEEcCCCCc-----ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         253 TGDMMAVDLRGKGK-----PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       253 dg~i~iwd~~~~~~-----~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      ||.|++||+++ +.     .+.....|...|++++|+|++++|++++.||.|++|++.++
T Consensus       228 Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~  286 (753)
T 3jro_A          228 DRTCIIWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  286 (753)
T ss_dssp             SSCEEEEEESS-SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred             CCEEEEecCCC-CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence            99999999998 53     33344468899999999999999999999999999999853

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-34  Score=271.03  Aligned_cols=263  Identities=6%  Similarity=0.020  Sum_probs=202.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .-...|.+++|+ |+|.++|+++.|++|+  +...++.+   .  +|...|.+  ++|+|       .++.+.+|+....
T Consensus        13 ~~~~~v~sv~~S-pDG~~iASas~D~TV~--d~~~~~~l---~--gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~   77 (588)
T 2j04_A           13 EFEDWKNNLTWA-RDGTLYLTTFPDISIG--QPKYAKDI---N--CNSKNLFHVKEFPLE-------FENKLDFELAQQN   77 (588)
T ss_dssp             CCSSSSCCEEEC-TTSCEEEECSSSEEEE--EECCCSCC---S--SBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred             HhhccEEEEEEC-CCCCEEEEEcCCceee--ccccccee---c--CCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence            446899999999 7999999999999999  65544433   3  66666655  57877       4555555554322


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      ...  ...|...|.+++|+|+|.+||+++.||.|++|+...  ++..+. +..             .-....|.+++|+|
T Consensus        78 ~~~--~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~-------------~~~~~sv~svafSP  139 (588)
T 2j04_A           78 GLL--NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKG-------------NLSSRTYHCFEWNP  139 (588)
T ss_dssp             CSS--TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSS-------------CSTTTCEEEEEECS
T ss_pred             eEe--ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCC-------------ccccccEEEEEEcC
Confidence            222  335688999999999999999999999999999644  444444 332             00011399999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCcc-------ceEEE----eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRR-------PVLKV----DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK  266 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  266 (444)
                      +|++||+|+.||+|++|++.   ...       .+.++    .+|...|.+++|+|+|  |++++.|+.|++|++.. +.
T Consensus       140 DG~~LAsgs~DGtVkIWd~~---~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~-~~  213 (588)
T 2j04_A          140 IESSIVVGNEDGELQFFSIR---KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA-SS  213 (588)
T ss_dssp             SSSCEEEEETTSEEEEEECC---CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS-SS
T ss_pred             CCCEEEEEcCCCEEEEEECC---CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC-Cc
Confidence            99999999999999999999   332       35666    5677899999999999  78888999999999987 65


Q ss_pred             c---eeEe-ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce-EEEeecCCceeEEEE--cCCCcccccchhhhh
Q psy8152         267 P---CYKY-KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL-LRKDYMQSRLTSILV--RSDFSLENETKKEEQ  339 (444)
Q Consensus       267 ~---~~~~-~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~  339 (444)
                      .   ..++ .+|...|.+++|+  +++||+++ +++|++|++.+++. .....|...+..++|  +++         +..
T Consensus       214 ~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d---------~~~  281 (588)
T 2j04_A          214 HQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE---------STI  281 (588)
T ss_dssp             SCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS---------CEE
T ss_pred             cccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC---------CCE
Confidence            3   3567 4788999999999  68999987 69999999999888 444468999999998  543         456


Q ss_pred             ccccccCCCccccCC
Q psy8152         340 EHSEEKGDSDEKYDP  354 (444)
Q Consensus       340 ~~s~~~d~~i~~W~~  354 (444)
                      +++++.+|+ ++|..
T Consensus       282 La~a~edG~-klw~~  295 (588)
T 2j04_A          282 LLMSNKTSY-KVLLE  295 (588)
T ss_dssp             EEECSSCEE-EEEES
T ss_pred             EEEEcCCCC-EEEee
Confidence            666666666 66654

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-33  Score=264.15  Aligned_cols=241  Identities=15%  Similarity=0.101  Sum_probs=201.0

Q ss_pred             CcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCC--CCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152          40 TNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTD--FKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY  114 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~  114 (444)
                      +|...|++++|+ |++.+| ++|+.||.|+||++.  +++.+..+..+.|...|.++  +|++++|++++.+|.|++|++
T Consensus       100 ~~~~~v~~~~~s-~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~  178 (450)
T 2vdu_B          100 PIYSYIRNLRLT-SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI  178 (450)
T ss_dssp             CCCCCEEEEEEC-TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             ccCCceEEEEEc-CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence            455689999999 789986 889999999999998  88888887655666666554  688999999999999999999


Q ss_pred             CCCCccc----cccccCCCeEEEEEecc---CCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccC
Q psy8152         115 KTEPDQW----TNFNVGPQLECMKHNKH---SNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       115 ~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      .++....    .+.+|...|++++|+|+   +++|++|+.|+.|++||+.+++.+.. +.+|..                
T Consensus       179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~----------------  242 (450)
T 2vdu_B          179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH----------------  242 (450)
T ss_dssp             TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS----------------
T ss_pred             CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC----------------
Confidence            8877553    57789999999999999   99999999999999999999887766 445655                


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC-------------------------CCCCeeEEEEc
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-------------------------PDVALSCITTT  241 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------------------------~~~~i~~~~~~  241 (444)
                        +|++++|+ ++++|++++.|+.|++||++   ..+++..+..                         ....|.+++|+
T Consensus       243 --~v~~~~~s-d~~~l~s~~~d~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~  316 (450)
T 2vdu_B          243 --FVSSICCG-KDYLLLSAGGDDKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS  316 (450)
T ss_dssp             --CEEEEEEC-STTEEEEEESSSEEEEEETT---TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred             --ceEEEEEC-CCCEEEEEeCCCeEEEEECC---CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence              79999999 99999999999999999999   6666666652                         23568999999


Q ss_pred             cCCCEEEEEc-CCCcEEEEEc--CCCC---cceeEeccccCceeEEEecCCCCEEEEE-EC------CCcEEEEEcCC
Q psy8152         242 NQSHYVIVGS-TTGDMMAVDL--RGKG---KPCYKYKGFAGCVKDIACPLNENLILSV-SL------DRHFRVHDFHS  306 (444)
Q Consensus       242 ~~~~~l~~~~-~dg~i~iwd~--~~~~---~~~~~~~~h~~~i~~~~~s~~~~~l~s~-~~------dg~i~vw~~~~  306 (444)
                      |++++|++++ .++.|+||++  .. +   .++..+..| ..|.+++|+|++ ++++. +.      +..|.+|.+..
T Consensus       317 ~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~  391 (450)
T 2vdu_B          317 KNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNL  391 (450)
T ss_dssp             SSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEET
T ss_pred             CCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEc
Confidence            9999999988 8999999999  55 5   667778877 889999999954 44444 32      45588887653

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.5e-33  Score=266.59  Aligned_cols=305  Identities=10%  Similarity=0.050  Sum_probs=241.7

Q ss_pred             EecCCCcEEEEEcCC--CccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee---ecc
Q psy8152          11 IGSSTGAFKGVNLSK--DKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD---VSF   85 (444)
Q Consensus        11 ~g~~dg~i~i~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~---~~~   85 (444)
                      .++.++.+++|.+..  +.  .   ..+..+.+...+.+++|+ |++.++++++.++.|++||+.+++....+.   ..+
T Consensus        94 ~~~~~~~~~l~~~d~~~~~--~---~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~  167 (433)
T 3bws_A           94 RKPEELNEKLIALDKEGIT--H---RFISRFKTGFQPKSVRFI-DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKK  167 (433)
T ss_dssp             SSGGGGTTCEEECCBTTCS--E---EEEEEEECSSCBCCCEES-SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHT
T ss_pred             cccCCCceEEEEECCCCCc--c---eEEEEEcCCCCceEEEEe-CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccc
Confidence            345556455665544  32  1   222222334567799999 577788888888999999999888776332   235


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCCceee
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~  162 (444)
                      |...+.++  ++++.++++++.++.|++|++.+++.+..+..|...+.+++|+|+++.++ +++.++.|++||+++++.+
T Consensus       168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~  247 (433)
T 3bws_A          168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI  247 (433)
T ss_dssp             TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             cCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence            66667655  56888999999999999999999888877777899999999999998885 4557999999999999888


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--------CCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--------KQGYVRVYDPKITTQRRPVLKVDIPDVA  234 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~  234 (444)
                      ..+..+..                   +.+++|+|++++|++++        .|+.|++||+.   ..+.+..+ .+...
T Consensus       248 ~~~~~~~~-------------------~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~---~~~~~~~~-~~~~~  304 (433)
T 3bws_A          248 RKTDKIGL-------------------PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD---KEKLIDTI-GPPGN  304 (433)
T ss_dssp             EECCCCSE-------------------EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT---TTEEEEEE-EEEEC
T ss_pred             EEecCCCC-------------------ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC---CCcEEeec-cCCCC
Confidence            77765444                   89999999999998887        58999999998   55555544 34457


Q ss_pred             eeEEEEccCCCEE-EEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC---------------CCc
Q psy8152         235 LSCITTTNQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL---------------DRH  298 (444)
Q Consensus       235 i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~---------------dg~  298 (444)
                      +.+++|+|+++++ ++++.++.|++||+.+ ++.+..+. +...+.+++|+|++++|++++.               ||.
T Consensus       305 ~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~  382 (433)
T 3bws_A          305 KRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK  382 (433)
T ss_dssp             EEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred             cceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence            8899999999755 5679999999999998 88888876 6778999999999998888876               579


Q ss_pred             EEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccc-cCCCccccCCC
Q psy8152         299 FRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEE-KGDSDEKYDPE  355 (444)
Q Consensus       299 i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~i~~W~~~  355 (444)
                      |++||+.+++.+..+.....+.+++|+++         ++++++++ .|+.|++|++.
T Consensus       383 v~~~d~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~~~~d~~i~v~~~~  431 (433)
T 3bws_A          383 VYVIDTTTDTVKEFWEAGNQPTGLDVSPD---------NRYLVISDFLDHQIRVYRRD  431 (433)
T ss_dssp             EEEEETTTTEEEEEEECSSSEEEEEECTT---------SCEEEEEETTTTEEEEEEET
T ss_pred             EEEEECCCCcEEEEecCCCCCceEEEcCC---------CCEEEEEECCCCeEEEEEec
Confidence            99999999999888887778999998754         56666655 59999999875

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-34  Score=269.60  Aligned_cols=280  Identities=11%  Similarity=0.050  Sum_probs=211.8

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      ++++.++|+++.|++|+  +....+       .+.  +|...|++++|+ |++       .++.+.+|+.   +....+.
T Consensus        24 SpDG~~iASas~D~TV~--d~~~~~-------~l~--gh~~~v~~V~Fs-Pdg-------~~~~~~~~~~---~~~~~~~   81 (588)
T 2j04_A           24 ARDGTLYLTTFPDISIG--QPKYAK-------DIN--CNSKNLFHVKEF-PLE-------FENKLDFELA---QQNGLLN   81 (588)
T ss_dssp             CTTSCEEEECSSSEEEE--EECCCS-------CCS--SBGGGTEEEEEE-CCC-------CCCTTTTSCC---CSSCSST
T ss_pred             CCCCCEEEEEcCCceee--cccccc-------eec--CCCccEEEEEEC-CCC-------CcceEEEEeC---CCceEee
Confidence            35789999999999999  643333       233  899999999999 677       4555555544   3322322


Q ss_pred             eccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCC-----CeEEEEEeccCCEEEEeeCCCeEEEEE
Q psy8152          83 VSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGP-----QLECMKHNKHSNIIATGGKENDLKLWD  155 (444)
Q Consensus        83 ~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~vwd  155 (444)
                      . .|...|.+  ++|+|.+||+++.+|.|++|+...  ++..+. |..     .|.+++|+|+|++||+|+.||+|++|+
T Consensus        82 ~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd  157 (588)
T 2j04_A           82 S-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS  157 (588)
T ss_dssp             T-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred             c-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence            1 33555654  589999999999999999999654  443334 554     599999999999999999999999999


Q ss_pred             cCCcee-------eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc---ce
Q psy8152         156 LNTTKN-------IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR---PV  225 (444)
Q Consensus       156 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~~  225 (444)
                      +..+..       +.+++.+..              .+..+|.+++|+|+|  +++++.|++|++|++.   ...   ..
T Consensus       158 ~~~~~l~~~~~i~l~ti~~~~~--------------gh~~~V~sVawSPdg--Laass~D~tVrlWd~~---~~~~~~~~  218 (588)
T 2j04_A          158 IRKNSENTPEFYFESSIRLSDA--------------GSKDWVTHIVWYEDV--LVAALSNNSVFSMTVS---ASSHQPVS  218 (588)
T ss_dssp             CCCCTTTCCCCEEEEEEECSCT--------------TCCCCEEEEEEETTE--EEEEETTCCEEEECCC---SSSSCCCE
T ss_pred             CCCCccccccceeeeeeecccc--------------cccccEEEEEEcCCc--EEEEeCCCeEEEEECC---CCccccce
Confidence            998752       455532221              122389999999998  8889999999999998   333   34


Q ss_pred             EEE-eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe--cCCCCEEEEEECCCcEEEE
Q psy8152         226 LKV-DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC--PLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       226 ~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~--s~~~~~l~s~~~dg~i~vw  302 (444)
                      .++ .+|...|.+++|+  +++||+++ ++.|++|++.. ++......+|...|..++|  +|++..|++++.+|+ ++|
T Consensus       219 ~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw  293 (588)
T 2j04_A          219 RMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVL  293 (588)
T ss_dssp             EEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEE
T ss_pred             eeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEE
Confidence            556 3788899999999  68999887 69999999997 6663434389999999999  999999999999999 999


Q ss_pred             EcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         303 DFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      ....               +.+.         |++..+++.  |+++++|+.....
T Consensus       294 ~~d~---------------~~~s---------pd~~l~a~~--d~~v~lW~~~g~~  323 (588)
T 2j04_A          294 LEDE---------------LHVT---------ADNIIAPYL--EKKFKKWSTIWNE  323 (588)
T ss_dssp             ESSS---------------EEEE---------CCCSSHHHH--HHHHHHTTTTTTS
T ss_pred             eecc---------------EEEC---------CCceEEEEc--CCEEEEEECCCCc
Confidence            9871               3344         334445543  8889999875444

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=7.7e-34  Score=264.62  Aligned_cols=293  Identities=9%  Similarity=0.060  Sum_probs=196.7

Q ss_pred             ccEEEecCCCcEEEEEcCCCccc---eeeeeeecccCcccceEEEeee-------------------ccCCcEEEEEEcC
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCI---IKNIQNVKYITNKASVLALNWG-------------------NVEESELLIAYSG   64 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~-------------------~~~~~~l~~~~~d   64 (444)
                      ..+++++.++.|.+|........   ......+....|...+.++.|+                   ++++.+|++|+.|
T Consensus        31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d  110 (393)
T 4gq1_A           31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQD  110 (393)
T ss_dssp             TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEETT
T ss_pred             CCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCC
Confidence            34555566888999987433210   0111112222334444444433                   2566789999999


Q ss_pred             CeEEEEeCCCCccccce---eeccccccEEEE--Ee--------CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE
Q psy8152          65 QKIKIYDTDFKNFNTNT---DVSFGEGDIVGV--SR--------YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE  131 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~---~~~~~~~~v~~~--s~--------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~  131 (444)
                      ++|+||++.++......   ...+|...|.++  +|        ++++|++++.|++|+|||+.++.++.....|..+|.
T Consensus       111 ~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~  190 (393)
T 4gq1_A          111 NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI  190 (393)
T ss_dssp             SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE
T ss_pred             CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE
Confidence            99999999887654321   235788888776  44        678999999999999999998887777888999999


Q ss_pred             EEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeee----CCC---cccccCccceeEEEEe-cCCCEE
Q psy8152         132 CMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSV----KPD---EFDLRRPVWVNGISFL-PNSDKV  202 (444)
Q Consensus       132 ~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~i~~~~~~-~~~~~l  202 (444)
                      +++|+|++ .+|++++.|++|++||+++++.......+........+    .+.   .....+...+.++.|+ |+++.|
T Consensus       191 ~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l  270 (393)
T 4gq1_A          191 SVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGI  270 (393)
T ss_dssp             EEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEE
T ss_pred             EEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEE
Confidence            99999965 58999999999999999987765544333221111111    111   0112344568899987 789999


Q ss_pred             EEEeCCceEEEEEcCCCCCccceEEEeCCCCCee------------------EEEEcc--CCCEEEEEcCCCcEEEEEcC
Q psy8152         203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS------------------CITTTN--QSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~------------------~~~~~~--~~~~l~~~~~dg~i~iwd~~  262 (444)
                      ++++.|+++++||+.   .......+..|...+.                  ...|+|  ++.++++|+.||.|+|||+.
T Consensus       271 ~s~s~d~~i~vwd~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~  347 (393)
T 4gq1_A          271 LAMCKSGAWLRWNLF---ANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY  347 (393)
T ss_dssp             EEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT
T ss_pred             EEEeCCCCEEEEECc---cCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECC
Confidence            999999999999998   3333333333322222                  233443  34567789999999999999


Q ss_pred             CCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         263 GKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       263 ~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      + +.++..+.+|..+|++++|+|+|++||+++.+| +.+|.+
T Consensus       348 ~-~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL  387 (393)
T 4gq1_A          348 E-KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL  387 (393)
T ss_dssp             C-TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred             C-CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence            9 888888888999999999999999999998776 656654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=8e-32  Score=236.81  Aligned_cols=270  Identities=11%  Similarity=0.007  Sum_probs=186.7

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeE-EEEeCCC----Cccccceee
Q psy8152           9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI-KIYDTDF----KNFNTNTDV   83 (444)
Q Consensus         9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i-~vw~~~~----~~~~~~~~~   83 (444)
                      |++++ ...|++|+...... -..+....  .|..+|..+.|.|...+++.++-..=.+ .++-+.-    ......+..
T Consensus        57 ~~~~~-~~~v~lw~~~~~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s  132 (356)
T 2w18_A           57 IITAC-EDVVSLWKALDAWQ-WEKLYTWH--FAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK  132 (356)
T ss_dssp             EEEEE-SSEEEEEEESSSSB-EEEEEEEE--CCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE
T ss_pred             EEEec-cceEEEcccCCCcc-ceeeEEEe--ccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe
Confidence            44444 56999999988732 12223333  6778888888884233333333322111 1121111    111111111


Q ss_pred             ccccccEEEEEeCCCeEEEEe--cCCcEEEEEc-CCCCccccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGVSRYDECILTAV--KSGDVKLWRY-KTEPDQWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~~--~dg~i~iw~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~  157 (444)
                      .+|...+..+ +.++++.+++  .++.|++|++ .+++.+..+..|...++.++|+|   ++.+|++++.|++|+|||+.
T Consensus       133 ~g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~  211 (356)
T 2w18_A          133 SGNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK  211 (356)
T ss_dssp             EEEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred             CCCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence            2444555555 4555555543  5999999999 44777777788999999999999   67999999999999999999


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE------------EEEeCCceEEEEEcCCCCCccce
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV------------AVCSKQGYVRVYDPKITTQRRPV  225 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~  225 (444)
                      +++++.++.++..               ....+.+++|+|+++++            ++|+.|++|++||..   ..+.+
T Consensus       212 TGk~l~tL~g~~~---------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~---tgk~l  273 (356)
T 2w18_A          212 TGQLLKKMHIDDS---------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK---TTLSV  273 (356)
T ss_dssp             TCCEEEEEECCC------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT---TTEEE
T ss_pred             CCcEEEEEcCCCc---------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC---CCEEE
Confidence            9999999876443               01247778899988765            668889999999998   66665


Q ss_pred             EEE-----eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCcee-EEEecCCCCEEEEEECCCcE
Q psy8152         226 LKV-----DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVK-DIACPLNENLILSVSLDRHF  299 (444)
Q Consensus       226 ~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~-~~~~s~~~~~l~s~~~dg~i  299 (444)
                      ..+     .+|...+.+..+  .+.++++|+.|++|+|||+.+ +++++++.+|...+. .++|+|+|++|++|+.|++|
T Consensus       274 ~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI  350 (356)
T 2w18_A          274 GVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI  350 (356)
T ss_dssp             EEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE
T ss_pred             EEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence            544     255544444444  478999999999999999999 999999999987655 58999999999999999999


Q ss_pred             EEEEc
Q psy8152         300 RVHDF  304 (444)
Q Consensus       300 ~vw~~  304 (444)
                      +||++
T Consensus       351 klWd~  355 (356)
T 2w18_A          351 FVYHY  355 (356)
T ss_dssp             EEEEE
T ss_pred             EEecC
Confidence            99986

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-33  Score=282.16  Aligned_cols=244  Identities=14%  Similarity=0.132  Sum_probs=209.3

Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~  157 (444)
                      .+|...|.++  +|++++|++|+.||.|++|++.  +++....+.+|..+|++++|+|+  +++|++|+.||.|++||+.
T Consensus         6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~   85 (753)
T 3jro_A            6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE   85 (753)
T ss_dssp             --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred             ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence            4788888877  6789999999999999999998  44556567789999999999986  9999999999999999999


Q ss_pred             Cce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         158 TTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      +++  .+..+..|..                  .|++++|+|+  +++|++|+.||.|++||++ .........+..|..
T Consensus        86 ~~~~~~~~~~~~h~~------------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~-~~~~~~~~~~~~~~~  146 (753)
T 3jro_A           86 NGRWSQIAVHAVHSA------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFK-ENGTTSPIIIDAHAI  146 (753)
T ss_dssp             TTEEEEEEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECC-SSSCCCCEEEECCSS
T ss_pred             CCcccccccccCCCC------------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEee-cCCCcceeEeecCCC
Confidence            876  5666666666                  7999999999  8999999999999999999 333455667788999


Q ss_pred             CeeEEEEcc-------------CCCEEEEEcCCCcEEEEEcCCCC----cceeEeccccCceeEEEecCC---CCEEEEE
Q psy8152         234 ALSCITTTN-------------QSHYVIVGSTTGDMMAVDLRGKG----KPCYKYKGFAGCVKDIACPLN---ENLILSV  293 (444)
Q Consensus       234 ~i~~~~~~~-------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~h~~~i~~~~~s~~---~~~l~s~  293 (444)
                      .|.+++|+|             ++.+|++|+.||.|++||+++ +    .++..+.+|..+|++++|+|+   +++|+++
T Consensus       147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~  225 (753)
T 3jro_A          147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV  225 (753)
T ss_dssp             CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred             ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC-CcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence            999999999             589999999999999999988 5    556777899999999999999   8999999


Q ss_pred             ECCCcEEEEEcCCCce------EEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         294 SLDRHFRVHDFHSKKL------LRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       294 ~~dg~i~vw~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      +.||.|++|++.++..      .....+...|++++|+++         +.++++++.||.|++|++..
T Consensus       226 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd---------g~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             ESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTT---------TCCEEEECSSSCEECCBCCS
T ss_pred             ecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCC---------CCEEEEEcCCCEEEEEecCC
Confidence            9999999999998631      111237788999998754         67899999999999999884

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=2e-31  Score=248.53  Aligned_cols=272  Identities=12%  Similarity=0.066  Sum_probs=222.9

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCccccccccCCCeEEEE
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMK  134 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~  134 (444)
                      ..+++++.++.|++|++.+++.+..+..+. .....+++|++++| ++++.++.|++||+.+++.+..+ .+...+.+++
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~   80 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-PAGSSPQGVA   80 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSEEEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE-ECCCCccceE
Confidence            467788899999999999998888775332 23345567899876 66778999999999999887644 4444999999


Q ss_pred             EeccCCEEEE-eeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE-EEEeCCceEE
Q psy8152         135 HNKHSNIIAT-GGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV-AVCSKQGYVR  212 (444)
Q Consensus       135 ~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~  212 (444)
                      |+|++++|++ ++.++.|++||+.+++.+..+..+..                   +.+++|+|++++| ++++.++.|+
T Consensus        81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~-------------------~~~~~~s~dg~~l~~~~~~~~~v~  141 (391)
T 1l0q_A           81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS-------------------PLGLALSPDGKKLYVTNNGDKTVS  141 (391)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS-------------------EEEEEECTTSSEEEEEETTTTEEE
T ss_pred             ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC-------------------cceEEECCCCCEEEEEeCCCCEEE
Confidence            9999997755 45679999999999988877765544                   8999999999877 6888899999


Q ss_pred             EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEE-EEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      +||+.   ..+.+..+..+. .+.+++|+|++++| ++++.++.|++||+++ ++.+..+. +...+.+++|+|++++|+
T Consensus       142 ~~d~~---~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~  215 (391)
T 1l0q_A          142 VINTV---TKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAY  215 (391)
T ss_dssp             EEETT---TTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEE
T ss_pred             EEECC---CCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEE
Confidence            99998   677777777654 46999999999887 5778899999999999 88887776 456889999999999998


Q ss_pred             EEE---CCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhc-cccccCCCccccCCCcccccccc
Q psy8152         292 SVS---LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQE-HSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       292 s~~---~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      +++   .++.|++||+.+++++..+.....+.+++|+++         ++++ ++++.++.|++|++..++.....
T Consensus       216 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~s~~~d~~v~v~d~~~~~~~~~~  282 (391)
T 1l0q_A          216 VTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPD---------GKKVYVALSFXNTVSVIDTATNTITATM  282 (391)
T ss_dssp             EEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTT---------SSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             EEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccC---------CCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence            888   689999999999998888876667888888754         4445 67789999999999987665443

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=3.2e-31  Score=250.57  Aligned_cols=273  Identities=10%  Similarity=0.079  Sum_probs=220.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeee-cccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNV-KYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ++..+++++.++.|++|++.+++..  ..... ...+|...|.+++|+ +++.++++++.++.|++|++.+++.+..+..
T Consensus       133 ~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~  209 (433)
T 3bws_A          133 NTRLAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDL  209 (433)
T ss_dssp             SSEEEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEEC
T ss_pred             CCeEEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcC
Confidence            5677888888999999999988742  11111 112789999999998 7899999999999999999999888877763


Q ss_pred             ccccccEEEEEeCCCeEEE-EecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--------CCCeEEEE
Q psy8152          84 SFGEGDIVGVSRYDECILT-AVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--------KENDLKLW  154 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~vw  154 (444)
                      +.......+++|+++++++ ++.++.|++||+.+++.+. ...+...+.+++|+|++++|++++        .|+.|++|
T Consensus       210 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~  288 (433)
T 3bws_A          210 TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY  288 (433)
T ss_dssp             SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred             CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence            3333334556788888754 4479999999999888775 444456699999999999999888        48899999


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE-EEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      |+.+++.+..+.. ..                  .+.+++|+|+++. +++++.++.|++||+.   ..+.+..+. +..
T Consensus       289 d~~~~~~~~~~~~-~~------------------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~---~~~~~~~~~-~~~  345 (433)
T 3bws_A          289 SMDKEKLIDTIGP-PG------------------NKRHIVSGNTENKIYVSDMCCSKIEVYDLK---EKKVQKSIP-VFD  345 (433)
T ss_dssp             ETTTTEEEEEEEE-EE------------------CEEEEEECSSTTEEEEEETTTTEEEEEETT---TTEEEEEEE-CSS
T ss_pred             ECCCCcEEeeccC-CC------------------CcceEEECCCCCEEEEEecCCCEEEEEECC---CCcEEEEec-CCC
Confidence            9999877665532 22                  4889999999965 5667899999999999   666666665 567


Q ss_pred             CeeEEEEccCCCEEEEEcC---------------CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC-CC
Q psy8152         234 ALSCITTTNQSHYVIVGST---------------TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL-DR  297 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~-dg  297 (444)
                      .+.+++|+|++++|++++.               ||.|++||+.+ ++.+..+.. ...+.+++|+|++++|++++. |+
T Consensus       346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~  423 (433)
T 3bws_A          346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-DTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDH  423 (433)
T ss_dssp             SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-TEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTT
T ss_pred             CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC-CcEEEEecC-CCCCceEEEcCCCCEEEEEECCCC
Confidence            7899999999998888766               57999999999 998888876 457899999999999988875 99


Q ss_pred             cEEEEEcCC
Q psy8152         298 HFRVHDFHS  306 (444)
Q Consensus       298 ~i~vw~~~~  306 (444)
                      .|++|++..
T Consensus       424 ~i~v~~~~~  432 (433)
T 3bws_A          424 QIRVYRRDG  432 (433)
T ss_dssp             EEEEEEETT
T ss_pred             eEEEEEecC
Confidence            999999864

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=1.9e-31  Score=244.97  Aligned_cols=263  Identities=11%  Similarity=0.077  Sum_probs=203.4

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      +++.+|++|+.+| +++|++...+..    ..    .+...+..+++. ++++.+ ++++.+++|+|||+.+++.+..+.
T Consensus        29 ~dg~~la~g~~~~-~~iw~~~~~~~~----~~----~~~~~~~~~~~~-~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~   98 (355)
T 3vu4_A           29 QDQSCLILSTLKS-FEIYNVHPVAHI----MS----QEMRHLSKVRML-HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK   98 (355)
T ss_dssp             TTSSEEEEECSSE-EEEEEETTEEEE----EE----EECSCCCEEEEC-TTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred             CCCCEEEEEcCCE-EEEEecCCccee----ee----eecCCeEEEEEc-CCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence            4567888888775 789998766531    11    112247788888 566666 567788999999999999888774


Q ss_pred             eccccccEEEEEeCCCeEEEEecCCcEEEEEcCCC-CccccccccCCCeEEEEEeccCCEEEE--eeCCCeEEEEEcCCc
Q psy8152          83 VSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE-PDQWTNFNVGPQLECMKHNKHSNIIAT--GGKENDLKLWDLNTT  159 (444)
Q Consensus        83 ~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~vwd~~~~  159 (444)
                         +...|.++.+....++++ .++.|++|++.++ +.+..+..   +...+++++  .++++  |+.+|.|++||+.++
T Consensus        99 ---~~~~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~  169 (355)
T 3vu4_A           99 ---VDAPVKDLFLSREFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSS  169 (355)
T ss_dssp             ---CSSCEEEEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-
T ss_pred             ---CCCceEEEEEcCCEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCC
Confidence               456888888877777765 4789999999988 66543333   555667776  56666  688999999999986


Q ss_pred             e---------------e-eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce-EEEEEcCCCCCc
Q psy8152         160 K---------------N-IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY-VRVYDPKITTQR  222 (444)
Q Consensus       160 ~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~  222 (444)
                      .               + +..+.+|..                  .|++++|+|++++|++|+.|++ |++||++   ..
T Consensus       170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~------------------~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~---~~  228 (355)
T 3vu4_A          170 GSATTQDQGVQQKAILGKGVLIKAHTN------------------PIKMVRLNRKSDMVATCSQDGTIIRVFKTE---DG  228 (355)
T ss_dssp             -----------------CCEEECCCSS------------------CEEEEEECTTSSEEEEEETTCSEEEEEETT---TC
T ss_pred             CccccccccccccccCcccEEEEccCC------------------ceEEEEECCCCCEEEEEeCCCCEEEEEECC---CC
Confidence            5               1 556666666                  8999999999999999999998 9999999   78


Q ss_pred             cceEEEe-C-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc--ceeEec---------------------cccCc
Q psy8152         223 RPVLKVD-I-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK--PCYKYK---------------------GFAGC  277 (444)
Q Consensus       223 ~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~---------------------~h~~~  277 (444)
                      .++..+. + |...|.+++|+|++++|++++.|++|+|||++. ..  ....+.                     .+..+
T Consensus       229 ~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (355)
T 3vu4_A          229 VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN-DQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR  307 (355)
T ss_dssp             CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC-CSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred             cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC-CCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence            8888888 5 899999999999999999999999999999976 32  111111                     11223


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      ...++|++++++|++++.||.+++|++..+
T Consensus       308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~  337 (355)
T 3vu4_A          308 GCKIAWISESSLVVVWPHTRMIETFKVVFD  337 (355)
T ss_dssp             CCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred             ceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence            467899999999999999999999998653

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.6e-32  Score=255.72  Aligned_cols=229  Identities=11%  Similarity=0.072  Sum_probs=170.3

Q ss_pred             eCCCeEEEEecCCcEEEEEcCCCCcc-----ccccccCCCeEEEEEec--------cCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          95 RYDECILTAVKSGDVKLWRYKTEPDQ-----WTNFNVGPQLECMKHNK--------HSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        95 ~~~~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      +++.+|++++.|++|+||++.++...     ..+.+|...|++++|+|        ++++||+|+.|++|+|||+.++.+
T Consensus        99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~  178 (393)
T 4gq1_A           99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP  178 (393)
T ss_dssp             EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence            45668999999999999999887543     24678999999999998        788999999999999999998888


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceE--------------
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL--------------  226 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--------------  226 (444)
                      +..+..+..                  +|.+++|+|++ .+|++++.|++|++||++   ..+...              
T Consensus       179 ~~~~~~~~~------------------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~---t~~~~~~~~~~~~~~~~~~~  237 (393)
T 4gq1_A          179 ILAGYPLSS------------------PGISVQFRPSNPNQLIVGERNGNIRIFDWT---LNLSAEENSQTELVKNPWLL  237 (393)
T ss_dssp             EEEEEECSS------------------CEEEEEEETTEEEEEEEEETTSEEEEEETT---CCC----------CSCCCSE
T ss_pred             eeeecCCCC------------------CcEEEEECCCCCceEEecCCCCEEEEEECC---CCcccccccccCCcccceEE
Confidence            877777776                  79999999987 589999999999999998   222111              


Q ss_pred             -----------EEeCCCCCeeEEEEc-cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE------------
Q psy8152         227 -----------KVDIPDVALSCITTT-NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA------------  282 (444)
Q Consensus       227 -----------~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~------------  282 (444)
                                 ...+|...+.++.|+ |+++.|++++.|+.+++||+.. ++....+..|...+..+.            
T Consensus       238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  316 (393)
T 4gq1_A          238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFP  316 (393)
T ss_dssp             EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSC
T ss_pred             ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccC
Confidence                       123567788999987 7999999999999999999988 776666665554444333            


Q ss_pred             ------ecC--CCCEEEEEECCCcEEEEEcCCCceEEEe-ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         283 ------CPL--NENLILSVSLDRHFRVHDFHSKKLLRKD-YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       283 ------~s~--~~~~l~s~~~dg~i~vw~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                            |+|  ++.++++|+.||+|++||+.+++++... .|..+|.+++|+++         +++|++++.+| +.+|.
T Consensus       317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd---------G~~LA~as~~G-v~lvr  386 (393)
T 4gq1_A          317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD---------GSHLAIATEGS-VLLTR  386 (393)
T ss_dssp             CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT---------SSEEEEEESSE-EEEEE
T ss_pred             cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC---------CCEEEEEeCCC-eEEEE
Confidence                  333  2346778889999999999998877664 48889999999854         68899887665 55554


Q ss_pred             CC
Q psy8152         354 PE  355 (444)
Q Consensus       354 ~~  355 (444)
                      +.
T Consensus       387 L~  388 (393)
T 4gq1_A          387 LM  388 (393)
T ss_dssp             EG
T ss_pred             Ee
Confidence            43

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.98  E-value=2.5e-31  Score=243.20  Aligned_cols=237  Identities=11%  Similarity=0.021  Sum_probs=182.1

Q ss_pred             EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceee
Q psy8152          94 SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus        94 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                      .+++.+|++|+.||.|++||+.+++.+..+.  ...|.++.|+|.   +++++.|++|++|+......+..+.... .+.
T Consensus        45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~-~~~  118 (343)
T 3lrv_A           45 YYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK-VLR  118 (343)
T ss_dssp             SEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC-EEE
T ss_pred             cCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc-eeE
Confidence            3577899999999999999999998875443  466888889887   9999999999999877432222111100 000


Q ss_pred             EeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEE
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVG  250 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~  250 (444)
                      ...       ..+...|.+++|+|  ++++|++++.|++|++||++   ....+..+. .+...|++++|+|++.+|++|
T Consensus       119 ~~~-------~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~---~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg  188 (343)
T 3lrv_A          119 EIE-------VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE---DDSQYIVHSAKSDVEYSSGVLHKDSLLLALY  188 (343)
T ss_dssp             EEE-------CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS---SSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred             Eee-------cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC---CCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence            000       01123699999999  99999999999999999999   565555553 345579999999999999999


Q ss_pred             cCCCcEEEEEcCCCCcce-eEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCcee--EE
Q psy8152         251 STTGDMMAVDLRGKGKPC-YKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLT--SI  322 (444)
Q Consensus       251 ~~dg~i~iwd~~~~~~~~-~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~--~~  322 (444)
                      +.||.|++||+++ ++.+ ..+.+ |..+|++++|+|++.+|++++ ++.|++||+++++.+..+.    +...+.  ++
T Consensus       189 ~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  266 (343)
T 3lrv_A          189 SPDGILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTY  266 (343)
T ss_dssp             CTTSCEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred             cCCCEEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEE
Confidence            9999999999999 8877 88887 999999999999999999999 5599999999987655433    223333  47


Q ss_pred             EEcCCCcccccchhhhhcccccc-CCCccccCCCcc
Q psy8152         323 LVRSDFSLENETKKEEQEHSEEK-GDSDEKYDPEHF  357 (444)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~s~~~-d~~i~~W~~~~~  357 (444)
                      +|+         |++.++++++. ++.+++|++...
T Consensus       267 ~~~---------~~g~~l~~~s~~d~~i~v~~~~~~  293 (343)
T 3lrv_A          267 DID---------DSGKNMIAYSNESNSLTIYKFDKK  293 (343)
T ss_dssp             EEC---------TTSSEEEEEETTTTEEEEEEECTT
T ss_pred             EEC---------CCCCEEEEecCCCCcEEEEEEccc
Confidence            766         44678898877 999999988643

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.98  E-value=1.1e-29  Score=223.37  Aligned_cols=273  Identities=10%  Similarity=0.063  Sum_probs=195.8

Q ss_pred             ceEEEeeeccCCc--EEEEEEcCCeEEEEeCCCC---ccccceeeccccccEEEEEeCC---CeEEEEecCCcEEEEEcC
Q psy8152          44 SVLALNWGNVEES--ELLIAYSGQKIKIYDTDFK---NFNTNTDVSFGEGDIVGVSRYD---ECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        44 ~v~~~~~~~~~~~--~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~~~s~~~---~~l~~~~~dg~i~iw~~~  115 (444)
                      .+.++.|-++..+  .+++++. ..|++|+...+   +.+.+  .+.|..+|..+.|..   +++.++-.+         
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~---------  108 (356)
T 2w18_A           41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYT--WHFAEVPVLQIVPVPDVYNLVCVALGN---------  108 (356)
T ss_dssp             EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEE--EECCSSCEEEECCCTTCCSCEEEEECS---------
T ss_pred             EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEE--EeccCceeEEEEEcCcccceeeeeecc---------
Confidence            4556666533222  5666666 79999999887   44444  458899999986533   233322111         


Q ss_pred             CCCccccccccCCCeEEEEEecc----CCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCccc----ccC
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKH----SNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFD----LRR  186 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~  186 (444)
                               -+...|+.++|+|+    ++++++++.  .+++|++.+++.+.. ..+|...+..++++|++..    ..+
T Consensus       109 ---------~~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~  177 (356)
T 2w18_A          109 ---------LEIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLM  177 (356)
T ss_dssp             ---------SSEEEEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEEC
T ss_pred             ---------ccccceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccC
Confidence                     12335777788887    777777763  377777777777666 4567777777777776532    234


Q ss_pred             ccceeEEEEec---CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---CCeeEEEEccCCCEE------------E
Q psy8152         187 PVWVNGISFLP---NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---VALSCITTTNQSHYV------------I  248 (444)
Q Consensus       187 ~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~  248 (444)
                      +..++.++|+|   ++.+|++++.|++|+|||+.   +++.+.++.+|.   ..+.+++|+|+|.++            +
T Consensus       178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~---TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~la  254 (356)
T 2w18_A          178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK---TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESES  254 (356)
T ss_dssp             CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT---TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------
T ss_pred             CCceeeEEeeccCCCCceEEEecCCCcEEEEECC---CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceee
Confidence            45688999999   67999999999999999999   888889888654   357778999999886            5


Q ss_pred             EEcCCCcEEEEEcCCCCcceeEe-----ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee-E
Q psy8152         249 VGSTTGDMMAVDLRGKGKPCYKY-----KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT-S  321 (444)
Q Consensus       249 ~~~~dg~i~iwd~~~~~~~~~~~-----~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~-~  321 (444)
                      +|+.|++|++||+.+ ++.+..+     .+|...+.+..++  +.++++++.|++|+|||+.+++++.++. |...+. +
T Consensus       255 SGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~  331 (356)
T 2w18_A          255 LRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSF  331 (356)
T ss_dssp             ---CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCE
T ss_pred             ccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEE
Confidence            678899999999999 8887765     3676665555554  7899999999999999999999999986 665544 5


Q ss_pred             EEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         322 ILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      ++|+++         +++++|++.|++||||++
T Consensus       332 vafSPD---------G~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          332 VKWSGT---------DSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEECSS---------SSEEEEECTTSCEEEEEE
T ss_pred             EEECCC---------CCEEEEEECCCcEEEecC
Confidence            888854         678999999999999984

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.97  E-value=3.6e-29  Score=234.41  Aligned_cols=287  Identities=10%  Similarity=0.046  Sum_probs=215.7

Q ss_pred             ccEEEec----CCC----cEEEEEc--CCCccceeeeeeecccCcccceEEEeeecc-------------CCcEEEEEEc
Q psy8152           7 YNIYIGS----STG----AFKGVNL--SKDKCIIKNIQNVKYITNKASVLALNWGNV-------------EESELLIAYS   63 (444)
Q Consensus         7 ~~l~~g~----~dg----~i~i~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-------------~~~~l~~~~~   63 (444)
                      ..+++|+    .+|    .|++||+  .+++.. .. ..+.  +|...+..+++++.             .+..++.++.
T Consensus        76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~  151 (415)
T 2hqs_A           76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVL-AQ-NSYK--VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQ  151 (415)
T ss_dssp             CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEE-EE-EEEE--ECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEE
T ss_pred             CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEE-ee-eEEE--cChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEe
Confidence            4566775    467    8999999  777641 11 1122  67888888887621             1566776665


Q ss_pred             C------CeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCC---cEEEEEcCCCCccccccccCCCeEE
Q psy8152          64 G------QKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSG---DVKLWRYKTEPDQWTNFNVGPQLEC  132 (444)
Q Consensus        64 d------~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~v~~  132 (444)
                      +      +.|++||+.. .....+.  .|...+.  +++|+|++|++++.++   .|++||+.+++.. .+..|...+.+
T Consensus       152 ~~~~~~~~~i~i~d~~g-~~~~~l~--~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~  227 (415)
T 2hqs_A          152 TNGGQFPYELRVSDYDG-YNQFVVH--RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGA  227 (415)
T ss_dssp             CSSSSCCEEEEEEETTS-CSCEEEE--EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEE
T ss_pred             cCCCCccceEEEEcCCC-CCCEEEe--CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccC
Confidence            4      7999999974 4444444  4555554  5689999999999875   9999999998876 46778889999


Q ss_pred             EEEeccCCEEE-EeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-C
Q psy8152         133 MKHNKHSNIIA-TGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-Q  208 (444)
Q Consensus       133 ~~~~~~~~~l~-~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d  208 (444)
                      ++|+|+++.|+ +++.++  .|++||+.+++. ..+..+..                  .+.+++|+|++++|++++. +
T Consensus       228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~------------------~~~~~~~spdg~~l~~~s~~~  288 (415)
T 2hqs_A          228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS------------------NNTEPTWFPDSQNLAFTSDQA  288 (415)
T ss_dssp             EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS------------------CEEEEEECTTSSEEEEEECTT
T ss_pred             EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC------------------cccceEECCCCCEEEEEECCC
Confidence            99999999888 666555  499999988765 34444444                  6899999999998888776 4


Q ss_pred             c--eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152         209 G--YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIAC  283 (444)
Q Consensus       209 ~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~  283 (444)
                      +  .|++||+.   ... ...+..+...+.+++|+|+|++|++++.+   ..|++||+.+ ++. ..+..|. .+.+++|
T Consensus       289 g~~~i~~~d~~---~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-~~~-~~l~~~~-~~~~~~~  361 (415)
T 2hqs_A          289 GRPQVYKVNIN---GGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-QVLSSTF-LDETPSL  361 (415)
T ss_dssp             SSCEEEEEETT---SSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-CCE-EECCCSS-SCEEEEE
T ss_pred             CCcEEEEEECC---CCC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC-CCE-EEecCCC-CcCCeEE
Confidence            4  67778887   333 34455566788899999999999987764   5899999998 665 4565554 8899999


Q ss_pred             cCCCCEEEEEECCC---cEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         284 PLNENLILSVSLDR---HFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       284 s~~~~~l~s~~~dg---~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      +|+|++|++++.++   .|++|++..+.......+.+.|.+++|++.
T Consensus       362 spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~  408 (415)
T 2hqs_A          362 APNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY  408 (415)
T ss_dssp             CTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred             cCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence            99999999988877   799999986554333347789999999875

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=5.5e-29  Score=240.17  Aligned_cols=319  Identities=12%  Similarity=0.063  Sum_probs=241.3

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeC--CCCcccccee
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDT--DFKNFNTNTD   82 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~--~~~~~~~~~~   82 (444)
                      ++..+++++.++.|.+||..+++.    +..+.. +|.  +.+++|+ |++++|++++.++.|++||+  .+++++..+.
T Consensus       148 ~~~~~vs~~~d~~V~v~D~~t~~~----~~~i~~-g~~--~~~v~~s-pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~  219 (543)
T 1nir_A          148 PNLFSVTLRDAGQIALVDGDSKKI----VKVIDT-GYA--VHISRMS-ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK  219 (543)
T ss_dssp             GGEEEEEEGGGTEEEEEETTTCCE----EEEEEC-STT--EEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred             CCEEEEEEcCCCeEEEEECCCceE----EEEEec-Ccc--cceEEEC-CCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence            456788889999999999988875    222321 333  8899999 79999999999999999999  7888877765


Q ss_pred             eccccccEEEEEe----CCCeEEEEec-CCcEEEEEcCCCCccccccc----------cC-CCeEEEEEeccC-CEEEEe
Q psy8152          83 VSFGEGDIVGVSR----YDECILTAVK-SGDVKLWRYKTEPDQWTNFN----------VG-PQLECMKHNKHS-NIIATG  145 (444)
Q Consensus        83 ~~~~~~~v~~~s~----~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~-~~l~~~  145 (444)
                      . +....-.+|+|    +|++|++++. +++|.+||..+++++..+..          |. ..+..+.++|++ .++++.
T Consensus       220 ~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~  298 (543)
T 1nir_A          220 I-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV  298 (543)
T ss_dssp             C-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             c-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence            3 22334466789    9999998885 89999999999888764432          22 378999999955 456677


Q ss_pred             eCCCeEEEEEcCCceeee--eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCc
Q psy8152         146 GKENDLKLWDLNTTKNIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQR  222 (444)
Q Consensus       146 ~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~  222 (444)
                      ..++.|.+||+.+.+.+.  .+. +..                  .+.+++|+|++++|+++ ..+++|.+||+.   ..
T Consensus       299 ~~~g~i~vvd~~~~~~l~~~~i~-~~~------------------~~~~~~~spdg~~l~va~~~~~~v~v~D~~---tg  356 (543)
T 1nir_A          299 KETGKVLLVNYKDIDNLTVTSIG-AAP------------------FLHDGGWDSSHRYFMTAANNSNKVAVIDSK---DR  356 (543)
T ss_dssp             TTTTEEEEEECTTSSSCEEEEEE-CCS------------------SCCCEEECTTSCEEEEEEGGGTEEEEEETT---TT
T ss_pred             CCCCeEEEEEecCCCcceeEEec-cCc------------------CccCceECCCCCEEEEEecCCCeEEEEECC---CC
Confidence            788999999998865433  222 222                  57889999999977655 568899999999   67


Q ss_pred             cceEEEeC----CCCCeeEEEEccC-CCEEEEEc-CCCcEEEEEcCCC------CcceeEeccccCceeEEEecCCCCEE
Q psy8152         223 RPVLKVDI----PDVALSCITTTNQ-SHYVIVGS-TTGDMMAVDLRGK------GKPCYKYKGFAGCVKDIACPLNENLI  290 (444)
Q Consensus       223 ~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-~dg~i~iwd~~~~------~~~~~~~~~h~~~i~~~~~s~~~~~l  290 (444)
                      +.+..+..    |......+ ++|+ +.+++++. .+++|.||++.+.      .++++++.+|...+..++|+|++++|
T Consensus       357 ~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l  435 (543)
T 1nir_A          357 RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHL  435 (543)
T ss_dssp             EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEE
T ss_pred             eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcE
Confidence            77777764    43323333 4677 66666665 5799999999761      57889999998888999999999999


Q ss_pred             EEEE-------CCCcEEEEEcCCCceE-EEe---------ecCCceeEEEEcCCCcccccchhhhhcccc-----ccCCC
Q psy8152         291 LSVS-------LDRHFRVHDFHSKKLL-RKD---------YMQSRLTSILVRSDFSLENETKKEEQEHSE-----EKGDS  348 (444)
Q Consensus       291 ~s~~-------~dg~i~vw~~~~~~~~-~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~-----~~d~~  348 (444)
                      ++++       .+++|.|||+.+++.. ..+         .+..++..+.|+++         +..+..+     +.++.
T Consensus       436 ~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------g~~~~~s~~~~~~~~~~  506 (543)
T 1nir_A          436 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR---------GDEVWFSVWNGKNDSSA  506 (543)
T ss_dssp             EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS---------SSEEEEEEECCTTSCCE
T ss_pred             EEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC---------CCEEEEEeecCCCCCCe
Confidence            9987       2779999999998877 333         23567888888755         4444432     35799


Q ss_pred             ccccCCCccccccccc
Q psy8152         349 DEKYDPEHFEMNQVTR  364 (444)
Q Consensus       349 i~~W~~~~~~~~~~~~  364 (444)
                      |.|||..+.++....+
T Consensus       507 i~v~D~~t~~~~~~i~  522 (543)
T 1nir_A          507 LVVVDDKTLKLKAVVK  522 (543)
T ss_dssp             EEEEETTTTEEEEEEC
T ss_pred             EEEEECCCceEEEeec
Confidence            9999999888765553

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.97  E-value=1.8e-28  Score=229.63  Aligned_cols=285  Identities=12%  Similarity=0.079  Sum_probs=213.4

Q ss_pred             ccceEEEeeeccCCcEEEEEE----cCC----eEEEEeC--CCCccccceeeccccccEEEEE--e--------------
Q psy8152          42 KASVLALNWGNVEESELLIAY----SGQ----KIKIYDT--DFKNFNTNTDVSFGEGDIVGVS--R--------------   95 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~----~d~----~i~vw~~--~~~~~~~~~~~~~~~~~v~~~s--~--------------   95 (444)
                      ...|....|.+....++++|+    .+|    .|+|||+  .+++.+....+.+|...+..+.  +              
T Consensus        62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~  141 (415)
T 2hqs_A           62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA  141 (415)
T ss_dssp             GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence            346777888844445676876    357    8999999  8888775444445555544331  1              


Q ss_pred             CCCeEEEEecC------CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC---eEEEEEcCCceeeeeee
Q psy8152          96 YDECILTAVKS------GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN---DLKLWDLNTTKNIFSAK  166 (444)
Q Consensus        96 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~  166 (444)
                      .+..++.++.+      +.|++||+..+. ...+..|...+.+++|+|++++|++++.++   .|++||+.+++.. .+.
T Consensus       142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~  219 (415)
T 2hqs_A          142 FRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA  219 (415)
T ss_dssp             TTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred             CCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence            25666666654      799999998544 445778999999999999999999999875   9999999988765 344


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCc--eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQG--YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      .+..                  .+.+++|+|+|++|+ +++.++  .|++||+.   ... ...+..|...+.+++|+|+
T Consensus       220 ~~~~------------------~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~---~~~-~~~l~~~~~~~~~~~~spd  277 (415)
T 2hqs_A          220 SFPR------------------HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA---SGQ-IRQVTDGRSNNTEPTWFPD  277 (415)
T ss_dssp             CCSS------------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETT---TCC-EEECCCCSSCEEEEEECTT
T ss_pred             cCCC------------------cccCEEEcCCCCEEEEEEecCCCceEEEEECC---CCC-EEeCcCCCCcccceEECCC
Confidence            4444                  689999999999877 666655  49999998   333 3566778888999999999


Q ss_pred             CCEEEEEcC-CC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC---CcEEEEEcCCCceEEEeecCC
Q psy8152         244 SHYVIVGST-TG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD---RHFRVHDFHSKKLLRKDYMQS  317 (444)
Q Consensus       244 ~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d---g~i~vw~~~~~~~~~~~~~~~  317 (444)
                      |++|++++. ++  .|++||+.+ ++ +..+..|...+.+++|+|+|++|++++.+   ..|++|++.++++.. +....
T Consensus       278 g~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~  354 (415)
T 2hqs_A          278 SQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTF  354 (415)
T ss_dssp             SSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSS
T ss_pred             CCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCC
Confidence            999888775 44  678889887 55 44555677789999999999999988764   589999999988743 33334


Q ss_pred             ceeEEEEcCCCcccccchhhhhccccccCC---CccccCCCccccccc
Q psy8152         318 RLTSILVRSDFSLENETKKEEQEHSEEKGD---SDEKYDPEHFEMNQV  362 (444)
Q Consensus       318 ~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~---~i~~W~~~~~~~~~~  362 (444)
                      .+.+++|+++         ++++++++.++   .|.+|++......++
T Consensus       355 ~~~~~~~spd---------g~~l~~~s~~~~~~~l~~~d~~g~~~~~l  393 (415)
T 2hqs_A          355 LDETPSLAPN---------GTMVIYSSSQGMGSVLNLVSTDGRFKARL  393 (415)
T ss_dssp             SCEEEEECTT---------SSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred             CcCCeEEcCC---------CCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence            7888888744         56777777776   799999876554443

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.96  E-value=1.2e-26  Score=211.98  Aligned_cols=296  Identities=9%  Similarity=0.037  Sum_probs=203.6

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-CeEEEEeCC--CCcccc--ce
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-QKIKIYDTD--FKNFNT--NT   81 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-~~i~vw~~~--~~~~~~--~~   81 (444)
                      ..+++++.++.|++|++.....    +..+....|...+.+++|+ |++++|++++.+ +.|++|++.  +++...  .+
T Consensus         6 ~l~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNHEGA----LTLTQVVDVPGQVQPMVVS-PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES   80 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSC----EEEEEEEECSSCCCCEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred             EEEEeCCCCCeEEEEEECCCCc----EEEeeeEecCCCCceEEEC-CCCCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence            4445558899999999964221    1223333577889999999 799999988886 999999997  555432  33


Q ss_pred             eeccccccEEEEEeCCCeEEEEec-CCcEEEEEcC---CCCccccccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEc
Q psy8152          82 DVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYK---TEPDQWTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDL  156 (444)
Q Consensus        82 ~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~  156 (444)
                      .... .....+++|++++|++++. ++.|.+|++.   ..+... .......+.+++|+|++++|++++ .++.|++|++
T Consensus        81 ~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~  158 (343)
T 1ri6_A           81 ALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD-VVEGLDGCHSANISPDNRTLWVPALKQDRICLFTV  158 (343)
T ss_dssp             ECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE-EECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             ccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccc-cccCCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence            2222 3445677899998876665 8889999994   333332 333445689999999999888877 8899999999


Q ss_pred             CC-ceeeee----eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCC-CCCccceEEEe
Q psy8152         157 NT-TKNIFS----AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKI-TTQRRPVLKVD  229 (444)
Q Consensus       157 ~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~-~~~~~~~~~~~  229 (444)
                      .+ ++....    +....                 ...+.+++|+|++++|+++ ..++.|++|++.. .........+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~  221 (343)
T 1ri6_A          159 SDDGHLVAQDPAEVTTVE-----------------GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD  221 (343)
T ss_dssp             CTTSCEEEEEEEEEECST-----------------TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE
T ss_pred             cCCCceeeecccccccCC-----------------CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc
Confidence            87 543321    11111                 1247889999999876554 4889999999961 11122222232


Q ss_pred             C---C---CCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCC---CcceeEeccccCceeEEEecCCCCEEEEEE-CCCc
Q psy8152         230 I---P---DVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGK---GKPCYKYKGFAGCVKDIACPLNENLILSVS-LDRH  298 (444)
Q Consensus       230 ~---~---~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~---~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~-~dg~  298 (444)
                      .   .   ...+..++|+|++++|+ ++..++.|++|++...   .+.+..+..+.. +.+++|+|++++|++++ .++.
T Consensus       222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~  300 (343)
T 1ri6_A          222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH  300 (343)
T ss_dssp             CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE
T ss_pred             ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe
Confidence            1   1   23466899999998877 4557899999999820   345555554444 88999999999888887 6899


Q ss_pred             EEEEEc--CCCce--EEEeecCCceeEEEEcCC
Q psy8152         299 FRVHDF--HSKKL--LRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       299 i~vw~~--~~~~~--~~~~~~~~~i~~~~~~~~  327 (444)
                      |.+|++  .++++  +..+.......+++|.+.
T Consensus       301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~  333 (343)
T 1ri6_A          301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH  333 (343)
T ss_dssp             EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEE
T ss_pred             EEEEEEcCCCceeeEccccccCCCCeeEEEEcc
Confidence            999955  45543  334445456777777653

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.96  E-value=6.8e-26  Score=218.61  Aligned_cols=289  Identities=12%  Similarity=0.041  Sum_probs=219.1

Q ss_pred             CCCcccEEEecCCCcEEEEEc--CCCccceeeeeeecccCcccceEEEeeecc----CCcEEEEEEc-CCeEEEEeCCCC
Q psy8152           3 LADDYNIYIGSSTGAFKGVNL--SKDKCIIKNIQNVKYITNKASVLALNWGNV----EESELLIAYS-GQKIKIYDTDFK   75 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~~~~~-d~~i~vw~~~~~   75 (444)
                      ++++.+|++++.++.|++|++  .+.+.    +..+   .+...+..++|+ |    ++++|++++. +++|.|||..++
T Consensus       187 spdg~~l~v~~~d~~V~v~D~~~~t~~~----~~~i---~~g~~p~~va~s-p~~~~dg~~l~v~~~~~~~v~v~D~~t~  258 (543)
T 1nir_A          187 SASGRYLLVIGRDARIDMIDLWAKEPTK----VAEI---KIGIEARSVESS-KFKGYEDRYTIAGAYWPPQFAIMDGETL  258 (543)
T ss_dssp             CTTSCEEEEEETTSEEEEEETTSSSCEE----EEEE---ECCSEEEEEEEC-CSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred             CCCCCEEEEECCCCeEEEEECcCCCCcE----EEEE---ecCCCcceEEeC-CCcCCCCCEEEEEEccCCeEEEEecccc
Confidence            356789999999999999999  55543    2222   345678999999 8    9999998884 899999999999


Q ss_pred             ccccceeecc--------c-cccEEE--EEeCCC-eEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEE
Q psy8152          76 NFNTNTDVSF--------G-EGDIVG--VSRYDE-CILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        76 ~~~~~~~~~~--------~-~~~v~~--~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      +++..+...+        | ...+.+  +++++. ++++...++.|.+||+.+.+.+. ....+...+.+++|+|++++|
T Consensus       259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l  338 (543)
T 1nir_A          259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF  338 (543)
T ss_dssp             CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE
T ss_pred             ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE
Confidence            9888876432        2 224444  467665 46667778999999998876543 233466778899999999977


Q ss_pred             EEee-CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEe-CCceEEEEEcCCC
Q psy8152         143 ATGG-KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCS-KQGYVRVYDPKIT  219 (444)
Q Consensus       143 ~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~-~d~~i~i~d~~~~  219 (444)
                      ++++ .+++|.+||+.+++++..+.....              .++.....+ ++|+ +..++++. .+++|.+||+.+.
T Consensus       339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~--------------ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~  403 (543)
T 1nir_A          339 MTAANNSNKVAVIDSKDRRLSALVDVGKT--------------PHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK  403 (543)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEEECSSS--------------BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred             EEEecCCCeEEEEECCCCeEEEeeccCCC--------------CCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence            6554 589999999999998877764211              011122222 4777 46666765 5899999999810


Q ss_pred             C----CccceEEEeCCCCCeeEEEEccCCCEEEEEc-------CCCcEEEEEcCCCCcce-eEe--------ccccCcee
Q psy8152         220 T----QRRPVLKVDIPDVALSCITTTNQSHYVIVGS-------TTGDMMAVDLRGKGKPC-YKY--------KGFAGCVK  279 (444)
Q Consensus       220 ~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~-~~~--------~~h~~~i~  279 (444)
                      .    ..+.+.++..|...+..++|+|++++|++++       .+++|.|||+.+ ++.. ..+        ..+...+.
T Consensus       404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~-~~~~~~~~~v~~~~~~~~~~~~~~  482 (543)
T 1nir_A          404 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN-LDAKYQVLPIAEWADLGEGAKRVV  482 (543)
T ss_dssp             TCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC-TTSCCEEECHHHHHCCCSSCCEEE
T ss_pred             CCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC-CCCCeEEeechhhcccCCCCCceE
Confidence            1    1788899999988889999999999999987       267999999999 7766 443        34567899


Q ss_pred             EEEecCCCCEEEEEE-----CCCcEEEEEcCCCceEEEeec
Q psy8152         280 DIACPLNENLILSVS-----LDRHFRVHDFHSKKLLRKDYM  315 (444)
Q Consensus       280 ~~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~~~~~~~~  315 (444)
                      .+.|+|+|+.|+++.     .++.|.|||..+++++.++..
T Consensus       483 ~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  523 (543)
T 1nir_A          483 QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD  523 (543)
T ss_dssp             EEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             eccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence            999999999888663     379999999999999887763

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.95  E-value=2.5e-25  Score=202.32  Aligned_cols=277  Identities=9%  Similarity=0.082  Sum_probs=196.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCcc-ccce
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNF-NTNT   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~-~~~~   81 (444)
                      ..+..+++++.++.|++|++.+++..    ..+.  .+...+ +++|+ |++++|++++. ++.|++||+.+++. ...+
T Consensus         8 ~~~~~~v~~~~~~~v~~~d~~~~~~~----~~~~--~~~~~~-~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~   79 (331)
T 3u4y_A            8 TSNFGIVVEQHLRRISFFSTDTLEIL----NQIT--LGYDFV-DTAIT-SDCSNVVVTSDFCQTLVQIETQLEPPKVVAI   79 (331)
T ss_dssp             CCCEEEEEEGGGTEEEEEETTTCCEE----EEEE--CCCCEE-EEEEC-SSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred             CCCEEEEEecCCCeEEEEeCccccee----eeEE--ccCCcc-eEEEc-CCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence            34566788889999999999888741    1222  234555 99999 78987777665 89999999998887 5555


Q ss_pred             eeccccccE-EEEEeCCCeEEEEecCC---cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe-eCCCe-EEEEE
Q psy8152          82 DVSFGEGDI-VGVSRYDECILTAVKSG---DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG-GKEND-LKLWD  155 (444)
Q Consensus        82 ~~~~~~~~v-~~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~vwd  155 (444)
                      .... .... .+++|++++|+++..++   .|.+|++.+++.+. ...+.....+++|+|++++|+++ ..++. |.+|+
T Consensus        80 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~  157 (331)
T 3u4y_A           80 QEGQ-SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFK  157 (331)
T ss_dssp             EECS-SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred             ccCC-CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence            4322 2233 67899999998555553   89999999888775 44455667999999999866555 55578 99999


Q ss_pred             cCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccc---eEEEeCC
Q psy8152         156 LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRP---VLKVDIP  231 (444)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~---~~~~~~~  231 (444)
                      +.....+.... ..    .+         .....+..++|+|++++|+ ++..++.|++||+.   ....   +..+..+
T Consensus       158 ~~~~g~~~~~~-~~----~~---------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~---~~~~~~~~~~~~~~  220 (331)
T 3u4y_A          158 IDADGVLFDTG-QE----FI---------SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ---NPENITLLNAVGTN  220 (331)
T ss_dssp             ECTTCCEEEEE-EE----EE---------CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS---STTSCEEEEEEECS
T ss_pred             ECCCCcEeecC-Cc----cc---------cCCCCccceEECCCCCEEEEEeCCCCeEEEEECC---CCcccceeeeccCC
Confidence            98643332211 00    00         0012478999999998655 55568999999998   5555   6666644


Q ss_pred             CCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCcc--eeEeccc----cC---ceeEEEecCCCCEEEEEEC-CCcEE
Q psy8152         232 DVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGKP--CYKYKGF----AG---CVKDIACPLNENLILSVSL-DRHFR  300 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~h----~~---~i~~~~~s~~~~~l~s~~~-dg~i~  300 (444)
                       ..+..++|+|+|++|++++ .++.|.+||+.+ ++.  +..+..+    ..   .+..++|+|++++|++++. ++.|+
T Consensus       221 -~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~  298 (331)
T 3u4y_A          221 -NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS-GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELK  298 (331)
T ss_dssp             -SCCCCEEECTTSSEEEEECSSEEEEEEEETTT-TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEE
T ss_pred             -CCCceEEECCCCCEEEEEEcCCCEEEEEECCC-CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEE
Confidence             5578999999999776654 577899999998 776  3333322    22   2356899999998866654 56999


Q ss_pred             EEEcCCCce
Q psy8152         301 VHDFHSKKL  309 (444)
Q Consensus       301 vw~~~~~~~  309 (444)
                      +|++.....
T Consensus       299 v~d~~~~~~  307 (331)
T 3u4y_A          299 VFTISGKVV  307 (331)
T ss_dssp             EEETTSCEE
T ss_pred             EEEecCCcc
Confidence            999987554

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.95  E-value=3.3e-26  Score=231.03  Aligned_cols=295  Identities=7%  Similarity=0.046  Sum_probs=211.6

Q ss_pred             CCcccEEEecC-CC-----cEEEEEcCCCccceeeeeeecccCcc----------------------cceEEEeeeccCC
Q psy8152           4 ADDYNIYIGSS-TG-----AFKGVNLSKDKCIIKNIQNVKYITNK----------------------ASVLALNWGNVEE   55 (444)
Q Consensus         4 ~~~~~l~~g~~-dg-----~i~i~~~~~~~~~~~~~~~~~~~~h~----------------------~~v~~~~~~~~~~   55 (444)
                      +++.+|++++. +|     .|++|++.+++.  ..+  +....+.                      ..|.+++|+ |++
T Consensus        46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S-pDg  120 (741)
T 2ecf_A           46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT--RLL--VDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS-PDA  120 (741)
T ss_dssp             TTSSEEEEEECCSSCTTEEEEEEEETTTCCE--EEE--ECGGGTC--------------------CCEESCCCEEC-TTS
T ss_pred             cCCCEEEEEeccCCCCcccEEEEEECCCCce--eEc--cchhhcccccccccchhhhhhhhhhhccccCcceeEEC-CCC
Confidence            46778888887 88     899999988873  111  1111122                      348999999 799


Q ss_pred             cEEEEEEcCCeEEEEeCCCC---ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC---
Q psy8152          56 SELLIAYSGQKIKIYDTDFK---NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ---  129 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---  129 (444)
                      ++|++++. +.|++|++.++   .... +..+.......+++|+|++|++++. +.|++|++.+++.......+...   
T Consensus       121 ~~l~~~~~-~~i~~~d~~~~~~~~~~~-l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~  197 (741)
T 2ecf_A          121 QRLLFPLG-GELYLYDLKQEGKAAVRQ-LTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGN  197 (741)
T ss_dssp             SEEEEEET-TEEEEEESSSCSTTSCCB-CCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred             CEEEEEeC-CcEEEEECCCCCcceEEE-cccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceec
Confidence            99999987 99999999987   4433 3322223334567899999998874 69999999988766433333332   


Q ss_pred             -------------eEEEEEeccCCEEEEeeCCC---------------------------------eEEEEEcCC-ceee
Q psy8152         130 -------------LECMKHNKHSNIIATGGKEN---------------------------------DLKLWDLNT-TKNI  162 (444)
Q Consensus       130 -------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~vwd~~~-~~~~  162 (444)
                                   +.+++|+|+|++|++++.++                                 .|++||+.+ ++..
T Consensus       198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~  277 (741)
T 2ecf_A          198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ  277 (741)
T ss_dssp             SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE
T ss_pred             cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE
Confidence                         47899999999999988765                                 788889887 6654


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-----CceEEEEEcCCCCCccceEEEeCCCC----
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-----QGYVRVYDPKITTQRRPVLKVDIPDV----  233 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~----  233 (444)
                      .......                +...+.+++| |+|++|++++.     +..|++||+.   .......+..+..    
T Consensus       278 ~~~~~~~----------------~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~  337 (741)
T 2ecf_A          278 WIDLGKE----------------QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA---SNQQRVLAHETSPTWVP  337 (741)
T ss_dssp             EECCCSC----------------SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT---TCCEEEEEEEECSSCCC
T ss_pred             EecCCCC----------------cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC---CCceEEEEEcCCCCcCC
Confidence            3322101                1226899999 99999887653     6789999998   4444444443332    


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE-EecCCCCEEEE-EECCC--cEEEEEcCC-Cc
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI-ACPLNENLILS-VSLDR--HFRVHDFHS-KK  308 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~-~~s~~~~~l~s-~~~dg--~i~vw~~~~-~~  308 (444)
                      .+..++|+|+|+++++++.+|.++||.+...+. +..+..|...|..+ .|+|+++.|+. ++.++  .++||++.. +.
T Consensus       338 ~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~  416 (741)
T 2ecf_A          338 LHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG  416 (741)
T ss_dssp             CCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred             cCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence            456899999999999999999888887763245 77888888888887 59999987755 44455  899999864 55


Q ss_pred             eEEEeecCCceeEEEEcCC
Q psy8152         309 LLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~  327 (444)
                      .+..+.....+..++|+++
T Consensus       417 ~~~~l~~~~~~~~~~~spd  435 (741)
T 2ecf_A          417 QPQRLSKAPGMHSASFARN  435 (741)
T ss_dssp             CCEECCCSCSEEEEEECTT
T ss_pred             CeeecccCCCceEEEECCC
Confidence            4555555666778888765

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.95  E-value=4e-25  Score=200.94  Aligned_cols=280  Identities=9%  Similarity=0.026  Sum_probs=199.2

Q ss_pred             eeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec-CCcEEEEEcCCCCc-ccccccc
Q psy8152          49 NWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYKTEPD-QWTNFNV  126 (444)
Q Consensus        49 ~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~-~~~~~~~  126 (444)
                      .|.+..+..+++++.++.|++||+.+++....+.... ..+..+++|+++++++++. ++.|.+||+.+++. ......+
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY-DFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-CEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC-CcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            4552334456678888999999999999887776433 2336677899997666665 88999999999887 5444445


Q ss_pred             CCCeEEEEEeccCCEEEEeeCCC---eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         127 GPQLECMKHNKHSNIIATGGKEN---DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       127 ~~~v~~~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      ..+..+++|+|++++|+++..++   .|.+||+.+++.+..+.....                   +.+++|+|++++|+
T Consensus        83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-------------------~~~~~~spdg~~l~  143 (331)
T 3u4y_A           83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD-------------------AVGIAISPNGNGLI  143 (331)
T ss_dssp             SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT-------------------EEEEEECTTSSCEE
T ss_pred             CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC-------------------ccceEECCCCCEEE
Confidence            55555599999999999665553   899999999888777665444                   78999999997554


Q ss_pred             -EEeCCce-EEEEEcCCCCCccce-EEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcc---eeEeccccC
Q psy8152         204 -VCSKQGY-VRVYDPKITTQRRPV-LKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKP---CYKYKGFAG  276 (444)
Q Consensus       204 -~~~~d~~-i~i~d~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~---~~~~~~h~~  276 (444)
                       +...++. |.+|++...+..... .........+..++|+|+|++|++ +..++.|++||+.+ ++.   +..+.. ..
T Consensus       144 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~~  221 (331)
T 3u4y_A          144 LIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-NN  221 (331)
T ss_dssp             EEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-SS
T ss_pred             EEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-CC
Confidence             5556678 999999811111111 122234455789999999996654 55789999999998 887   777764 35


Q ss_pred             ceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCce--EEEeecC-----Cc---eeEEEEcCCCcccccchhhhhc-cccc
Q psy8152         277 CVKDIACPLNENLILSVS-LDRHFRVHDFHSKKL--LRKDYMQ-----SR---LTSILVRSDFSLENETKKEEQE-HSEE  344 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~--~~~~~~~-----~~---i~~~~~~~~~~~~~~~~~~~~~-~s~~  344 (444)
                      .+..++|+|++++|++++ .++.|.+|++.++++  +..+...     ..   ...++|++         +++++ ++..
T Consensus       222 ~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp---------dg~~l~v~~~  292 (331)
T 3u4y_A          222 LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNK---------TETKLFISAN  292 (331)
T ss_dssp             CCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECT---------TSSEEEEEET
T ss_pred             CCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECC---------CCCEEEEecC
Confidence            678999999999776654 578899999999887  3332211     11   23356664         45555 5566


Q ss_pred             cCCCccccCCCcccc
Q psy8152         345 KGDSDEKYDPEHFEM  359 (444)
Q Consensus       345 ~d~~i~~W~~~~~~~  359 (444)
                      .++.|.+|++.....
T Consensus       293 ~~~~v~v~d~~~~~~  307 (331)
T 3u4y_A          293 ISRELKVFTISGKVV  307 (331)
T ss_dssp             TTTEEEEEETTSCEE
T ss_pred             CCCcEEEEEecCCcc
Confidence            678999999986554

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=9.2e-26  Score=201.31  Aligned_cols=255  Identities=11%  Similarity=0.061  Sum_probs=189.3

Q ss_pred             EecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Cccccceeecc-ccc
Q psy8152          11 IGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSF-GEG   88 (444)
Q Consensus        11 ~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~-~~~   88 (444)
                      .++.++.|++|++.+++.     ..+.  .|...|.+++|+ |++++|++++ ++.|++|++.+ ++.......+. ...
T Consensus        17 ~~~~~~~i~~~d~~~~~~-----~~~~--~~~~~v~~~~~s-pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~   87 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKM-----RVVW--QTPELFEAPNWS-PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICN   87 (297)
T ss_dssp             -CCCCEEEEEEETTTTEE-----EEEE--EESSCCEEEEEC-TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred             CCCcceeEEEEeCCCCce-----eeec--cCCcceEeeEEC-CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccc
Confidence            346789999999988763     1222  578899999999 7999999987 78999999998 77665543211 122


Q ss_pred             cEEEEEeCCCeEEEEec--CCcEEEEE--cCCCCccccccccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCC-ceee
Q psy8152          89 DIVGVSRYDECILTAVK--SGDVKLWR--YKTEPDQWTNFNVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNT-TKNI  162 (444)
Q Consensus        89 ~v~~~s~~~~~l~~~~~--dg~i~iw~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~-~~~~  162 (444)
                      ...+++|++++|++++.  ++.+.||.  +.++...  ...+...+.+++|+|++++|+ +++.++.+++|++.. ....
T Consensus        88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~  165 (297)
T 2ojh_A           88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR--LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE  165 (297)
T ss_dssp             SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE--ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred             cceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE--EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence            33678899999999983  34555554  4555433  333344599999999999877 777899999998643 2233


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      ..+..+..                  .+.+++|+|++++|++++ .++.+++|++.  .....+..+..+...+..++|+
T Consensus       166 ~~~~~~~~------------------~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~s  225 (297)
T 2ojh_A          166 TRLTHGEG------------------RNDGPDYSPDGRWIYFNSSRTGQMQIWRVR--VDGSSVERITDSAYGDWFPHPS  225 (297)
T ss_dssp             EECCCSSS------------------CEEEEEECTTSSEEEEEECTTSSCEEEEEE--TTSSCEEECCCCSEEEEEEEEC
T ss_pred             eEcccCCC------------------ccccceECCCCCEEEEEecCCCCccEEEEC--CCCCCcEEEecCCcccCCeEEC
Confidence            33333333                  689999999999887665 58999999986  2344556677777789999999


Q ss_pred             cCCCEEEEEcCC-----------CcEEEEEcCCCCcc--eeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152         242 NQSHYVIVGSTT-----------GDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       242 ~~~~~l~~~~~d-----------g~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      |++++|++++.+           +.|++||+.+ ++.  +..+.+|...+.+++|+|++++|++++.+.
T Consensus       226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG-GNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS-CSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CCCCEEEEEEcCCCCCcccccCceEEEEEecCC-CCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            999999887765           5699999988 655  444457888999999999999998887654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.95  E-value=8.7e-26  Score=205.66  Aligned_cols=273  Identities=10%  Similarity=-0.035  Sum_probs=205.4

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc-ceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeec
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA-SVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+|++++.++.|++|++.+++.    +..+.. ++.. .+.+++|+ |++++++ ++..++.|.+||+.+++.+..+...
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~----~~~~~~-~~~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~   75 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAV----DKVITI-ADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLS   75 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEE----EEEEEC-TTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred             cEEEEcCCCCeEEEEECCCCcE----EEEEEc-CCCCCCccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence            5789999999999999988764    122221 2222 48899999 7887665 4556789999999999887766542


Q ss_pred             c-----ccccEEEEEeCCCeEEEEe------------cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC
Q psy8152          85 F-----GEGDIVGVSRYDECILTAV------------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK  147 (444)
Q Consensus        85 ~-----~~~~v~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  147 (444)
                      .     ......+++|++++|+++.            .++.|.+|++.+++.+. .......+.+++|+|++++|+++  
T Consensus        76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~--  152 (337)
T 1pby_B           76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFEAPRQITMLAWARDGSKLYGL--  152 (337)
T ss_dssp             BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEECCSSCCCEEECTTSSCEEEE--
T ss_pred             CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE-EEeCCCCcceeEECCCCCEEEEe--
Confidence            2     0334467889999988886            57999999999887765 33345678899999999988888  


Q ss_pred             CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc-----------------
Q psy8152         148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG-----------------  209 (444)
Q Consensus       148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~-----------------  209 (444)
                      ++.|.+||+.+++.+..+.....                   ...+.|+|++.+|+..+. ++                 
T Consensus       153 ~~~i~~~d~~~~~~~~~~~~~~~-------------------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~  213 (337)
T 1pby_B          153 GRDLHVMDPEAGTLVEDKPIQSW-------------------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPAD  213 (337)
T ss_dssp             SSSEEEEETTTTEEEEEECSTTT-------------------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTS
T ss_pred             CCeEEEEECCCCcEeeeeecccc-------------------CCCceeCCCccEEeeeccCCCceeeeeecccccccccc
Confidence            58899999999887766654331                   112256777765544332 22                 


Q ss_pred             ------eEEEEEcCCCCCccc-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152         210 ------YVRVYDPKITTQRRP-VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA  282 (444)
Q Consensus       210 ------~i~i~d~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~  282 (444)
                            .|.+||+.   ..+. ...+..+...+.+++|+|++++|+++  ++.|++||+.+ ++.+..+..+ ..+.+++
T Consensus       214 ~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~  286 (337)
T 1pby_B          214 PTAYRTGLLTMDLE---TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-NASIKRVPLP-HSYYSVN  286 (337)
T ss_dssp             GGGEEEEEEEEETT---TCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-TEEEEEEECS-SCCCEEE
T ss_pred             ccccccceEEEeCC---CCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC-CcCcceecCC-CceeeEE
Confidence                  57899998   3332 34445566678899999999999988  78999999998 8888877643 4678999


Q ss_pred             ecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         283 CPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      |+|++++|++++.++.|++|++.+++.+..+.
T Consensus       287 ~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~  318 (337)
T 1pby_B          287 VSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             ECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             ECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence            99999999999999999999999998887765

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.95  E-value=1.7e-25  Score=224.53  Aligned_cols=317  Identities=10%  Similarity=0.021  Sum_probs=216.8

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc------------CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI------------TNKASVLALNWGNVEESELLIAYSGQKIKIYDTD   73 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~   73 (444)
                      +..++.++.+| | +||+.+++.....+.....+            .+...|.+++|+ |+ .+++.+. ++.|++||+.
T Consensus        35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s-pd-~~~~~~~-~~~i~~~d~~  109 (706)
T 2z3z_A           35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA-GR-GLVVLFT-QGGLVGFDML  109 (706)
T ss_dssp             TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET-TT-TEEEEEE-TTEEEEEETT
T ss_pred             CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC-CC-CeEEEEE-CCEEEEEECC
Confidence            34566667777 8 99998887310222111100            012569999999 67 6666554 5999999998


Q ss_pred             CCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCC-----CCccccccccCCC--------------eEEEE
Q psy8152          74 FKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKT-----EPDQWTNFNVGPQ--------------LECMK  134 (444)
Q Consensus        74 ~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~--------------v~~~~  134 (444)
                      +++...... ........+++|+|++|+++ .++.|++|++.+     ++.......+...              +.+++
T Consensus       110 ~~~~~~l~~-~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~  187 (706)
T 2z3z_A          110 ARKVTYLFD-TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTF  187 (706)
T ss_dssp             TTEEEEEEC-CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEE
T ss_pred             CCceEEccC-CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEE
Confidence            887654432 12233346789999999985 779999999998     7766433333332              48999


Q ss_pred             EeccCCEEEEee---------------------------------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         135 HNKHSNIIATGG---------------------------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       135 ~~~~~~~l~~~~---------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      |+|+|++|++++                                 .+..|++||+.+++..........           
T Consensus       188 ~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-----------  256 (706)
T 2z3z_A          188 WSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK-----------  256 (706)
T ss_dssp             ECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT-----------
T ss_pred             ECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC-----------
Confidence            999999999987                                 446799999988775443321111           


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCc-----eEEEEEcCCCCCccceEEEe--CCC---CCeeEEEEcc--CCCEEEE
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQG-----YVRVYDPKITTQRRPVLKVD--IPD---VALSCITTTN--QSHYVIV  249 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~--~~~---~~i~~~~~~~--~~~~l~~  249 (444)
                           ...+.+++|+|++++|++++.++     .|++||+.   .......+.  .+.   ..+..++|+|  +|++|++
T Consensus       257 -----~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~  328 (706)
T 2z3z_A          257 -----EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE---TGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ  328 (706)
T ss_dssp             -----TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT---TCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred             -----ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC---CCceeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence                 12589999999999999887765     99999998   442222221  122   2346789999  9999999


Q ss_pred             EcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEEEEECC-C----cEEEEEcCCCceEEEeecCCceeEEE
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLILSVSLD-R----HFRVHDFHSKKLLRKDYMQSRLTSIL  323 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~s~~~d-g----~i~vw~~~~~~~~~~~~~~~~i~~~~  323 (444)
                      ++.++.++||.+...+..+..+..|...+.. ++|+|+++.|+.++.+ +    .|+.|++.+++ +..+.+...+.+++
T Consensus       329 ~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~  407 (706)
T 2z3z_A          329 SRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQ  407 (706)
T ss_dssp             ECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEE
T ss_pred             EccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEE
Confidence            9999999999887227778888888878877 7999999877665544 3    67777887766 34555777788888


Q ss_pred             EcCCCcccccchhhhhccccccC----CCccccCCCccc
Q psy8152         324 VRSDFSLENETKKEEQEHSEEKG----DSDEKYDPEHFE  358 (444)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~s~~~d----~~i~~W~~~~~~  358 (444)
                      |+++         +++++....+    +.+.+|++.+++
T Consensus       408 ~spd---------g~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          408 LSPD---------GSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             ECTT---------SSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             ECCC---------CCEEEEEecCCCCCcEEEEEECCCCe
Confidence            8755         4555544322    559999988765

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.95  E-value=2.3e-24  Score=197.59  Aligned_cols=262  Identities=13%  Similarity=0.083  Sum_probs=208.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEc-------CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEE-EecCCcEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYS-------GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILT-AVKSGDVKL  111 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~-~~~dg~i~i  111 (444)
                      .....+..++|+ |++++|++++.       ++.|.+||..+++....+.. +....-.+++|+++++++ ...++.|.+
T Consensus        38 ~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~  115 (353)
T 3vgz_A           38 AVGKGAYEMAYS-QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTA  115 (353)
T ss_dssp             EEESSEEEEEEE-TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred             hhccCccceEEC-CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence            345678899999 78888888774       56899999999998887764 223445678999986554 455799999


Q ss_pred             EEcCCCCccccccccCC---------CeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152         112 WRYKTEPDQWTNFNVGP---------QLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       112 w~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (444)
                      ||+.+++.+..+..+..         .+.+++|+|+++++++++  .++.|.+||+.+++.+..+..+..          
T Consensus       116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------  185 (353)
T 3vgz_A          116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK----------  185 (353)
T ss_dssp             EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT----------
T ss_pred             EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC----------
Confidence            99999887654433322         278999999999887776  478999999999988877763433          


Q ss_pred             cccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC----CCCCeeEEEEccCCCEEEEEcC-CCc
Q psy8152         181 EFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI----PDVALSCITTTNQSHYVIVGST-TGD  255 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~-dg~  255 (444)
                              .+.+++|+|++++|++++.++.|.+||+.   ..+.+..+..    +...+..++|+|++++|++++. ++.
T Consensus       186 --------~~~~~~~s~dg~~l~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  254 (353)
T 3vgz_A          186 --------MSTGLALDSEGKRLYTTNADGELITIDTA---DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE  254 (353)
T ss_dssp             --------TCCCCEEETTTTEEEEECTTSEEEEEETT---TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred             --------ccceEEECCCCCEEEEEcCCCeEEEEECC---CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence                    47889999999999999999999999998   6666666654    4456778999999997776554 589


Q ss_pred             EEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         256 MMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      |.+||+.+ ++.+..+....  ...++|+|+++++++++ .++.|.+||+.+++.+..+.....+.+++|+++
T Consensus       255 v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d  324 (353)
T 3vgz_A          255 VLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSAD  324 (353)
T ss_dssp             EEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTT
T ss_pred             EEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCC
Confidence            99999999 88888877533  25789999999666555 689999999999999888887778888888755

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.94  E-value=1.6e-25  Score=226.03  Aligned_cols=293  Identities=10%  Similarity=0.011  Sum_probs=211.4

Q ss_pred             ccceEEEeeeccCCcEEEEEEc-CC-----eEEEEeCCCCccccceeecccc------------------------ccEE
Q psy8152          42 KASVLALNWGNVEESELLIAYS-GQ-----KIKIYDTDFKNFNTNTDVSFGE------------------------GDIV   91 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~-d~-----~i~vw~~~~~~~~~~~~~~~~~------------------------~~v~   91 (444)
                      ...|.+++|+ |++++|++++. ++     .|++|++.+++....+..+.+.                        ....
T Consensus        36 ~~~~~~~~~S-pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  114 (741)
T 2ecf_A           36 GPTLMKPKVA-PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY  114 (741)
T ss_dssp             CCCCEEEEEC-TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred             CCCCCCceEe-cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence            4679999999 79999999998 88     9999999998876666433322                        2345


Q ss_pred             EEEeCCCeEEEEecCCcEEEEEcCCC---CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152          92 GVSRYDECILTAVKSGDVKLWRYKTE---PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV  168 (444)
Q Consensus        92 ~~s~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~  168 (444)
                      +++|+|++|++++. +.|++|++.++   ... .+..|...+.+++|+|+|++|++++. +.|++||+.+++.......+
T Consensus       115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~  191 (741)
T 2ecf_A          115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADG  191 (741)
T ss_dssp             EECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCC
T ss_pred             EECCCCCEEEEEeC-CcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCC
Confidence            77999999999887 89999999988   544 47778888999999999999999874 69999999987765443322


Q ss_pred             cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc---------------------------------eEEEEE
Q psy8152         169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG---------------------------------YVRVYD  215 (444)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------------------------~i~i~d  215 (444)
                      ...+.  .-.++.........+.+++|+|+|++|++++.++                                 .|++||
T Consensus       192 ~~~~~--~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d  269 (741)
T 2ecf_A          192 STTIG--NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS  269 (741)
T ss_dssp             CSSEE--ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred             cccee--ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence            21000  0000000000001147899999999999887665                                 788999


Q ss_pred             cCCCCC-ccceEEEe--CCCCCeeEEEEccCCCEEEEEcC-----CCcEEEEEcCCCCcceeEeccccC----ceeEEEe
Q psy8152         216 PKITTQ-RRPVLKVD--IPDVALSCITTTNQSHYVIVGST-----TGDMMAVDLRGKGKPCYKYKGFAG----CVKDIAC  283 (444)
Q Consensus       216 ~~~~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~h~~----~i~~~~~  283 (444)
                      +.   . ........  .+...+..++| |+|++|++++.     +..|++||+.+ ++....+..+..    .+..++|
T Consensus       270 ~~---~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~  344 (741)
T 2ecf_A          270 PA---EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPTWVPLHNSLRF  344 (741)
T ss_dssp             SS---TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECSSCCCCCSCCEE
T ss_pred             CC---CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCCCcCCcCCceEE
Confidence            88   3 33333222  36677899999 99999987653     56799999999 887777765543    4568899


Q ss_pred             cCCCCEEEEEECCCcEEEEEcC-CCceEEEee-cCCceeEE-EEcCCCcccccchhhhhc-cccccCC--CccccCCC
Q psy8152         284 PLNENLILSVSLDRHFRVHDFH-SKKLLRKDY-MQSRLTSI-LVRSDFSLENETKKEEQE-HSEEKGD--SDEKYDPE  355 (444)
Q Consensus       284 s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~~-~s~~~d~--~i~~W~~~  355 (444)
                      +|+|+++++++.+|.++||.+. .++ ...+. +...+..+ .|+++         ++.+ ++++.++  .++||.+.
T Consensus       345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~d---------g~~l~~~~~~~~~~~~~l~~~~  412 (741)
T 2ecf_A          345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEK---------AGLAYFRAGIESARESQIYAVP  412 (741)
T ss_dssp             CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETT---------TTEEEEEECSSCTTCBEEEEEE
T ss_pred             CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCC---------CCEEEEEEeCCCCceEEEEEEE
Confidence            9999999999999988888765 344 44443 55567666 47654         4444 4555555  89999875

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.94  E-value=2.4e-23  Score=191.70  Aligned_cols=296  Identities=8%  Similarity=0.076  Sum_probs=199.0

Q ss_pred             cccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC----CeEEEEeCCC--C
Q psy8152           6 DYNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG----QKIKIYDTDF--K   75 (444)
Q Consensus         6 ~~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d----~~i~vw~~~~--~   75 (444)
                      ..++++|+.    ++.|++|.+.......   ..+... +...+..++|+ |++++|++++.+    +.|.+|++..  +
T Consensus        13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~---~~~~~~-~~~~p~~l~~s-pdg~~l~~~~~~~~~~~~v~~~~~~~~~g   87 (361)
T 3scy_A           13 ELTMLVGTYTSGNSKGIYTFRFNEETGES---LPLSDA-EVANPSYLIPS-ADGKFVYSVNEFSKDQAAVSAFAFDKEKG   87 (361)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEEETTTCCE---EEEEEE-ECSCCCSEEEC-TTSSEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred             ceEEEEEeccCCCCCCEEEEEEeCCCCCE---EEeecc-cCCCCceEEEC-CCCCEEEEEEccCCCCCcEEEEEEeCCCC
Confidence            457788854    5689999885432212   222222 57778889999 799999998885    7999998865  4


Q ss_pred             ccccceeeccccccEEEEEeCCCeEEEEe-cCCcEEEEEcCCCCcccccc--------------ccCCCeEEEEEeccCC
Q psy8152          76 NFNTNTDVSFGEGDIVGVSRYDECILTAV-KSGDVKLWRYKTEPDQWTNF--------------NVGPQLECMKHNKHSN  140 (444)
Q Consensus        76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~  140 (444)
                      +.........+......+++++++|++++ .++.|.+|++.....+....              .+...+.+++|+|+++
T Consensus        88 ~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~  167 (361)
T 3scy_A           88 TLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK  167 (361)
T ss_dssp             EEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred             cEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence            44333332333445556666888877776 57899999997544332111              1233468899999999


Q ss_pred             EEEEee-CCCeEEEEEcCCcee------ee------eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-
Q psy8152         141 IIATGG-KENDLKLWDLNTTKN------IF------SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-  206 (444)
Q Consensus       141 ~l~~~~-~d~~i~vwd~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-  206 (444)
                      +|++++ .++.|++|++.....      +.      ......                 ...+..++|+|++++|++++ 
T Consensus       168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~v~~~  230 (361)
T 3scy_A          168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-----------------GSGPRHLIFNSDGKFAYLINE  230 (361)
T ss_dssp             EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-----------------TCCEEEEEECTTSSEEEEEET
T ss_pred             EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-----------------CCCCeEEEEcCCCCEEEEEcC
Confidence            766555 488999999876431      11      111110                 11478999999999887766 


Q ss_pred             CCceEEEEEcCCCCCccceEEEe---CCCCCeeEEEEccCCCEEEEEcC--CCcEEEEEcCC-CCc--ceeEeccccCce
Q psy8152         207 KQGYVRVYDPKITTQRRPVLKVD---IPDVALSCITTTNQSHYVIVGST--TGDMMAVDLRG-KGK--PCYKYKGFAGCV  278 (444)
Q Consensus       207 ~d~~i~i~d~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~-~~~--~~~~~~~h~~~i  278 (444)
                      .++.|.+|++. ......+..+.   .+......++|+|+|++|+++..  ++.|.+|++.. .++  .+..+.. ...+
T Consensus       231 ~~~~v~v~~~~-~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~  308 (361)
T 3scy_A          231 IGGTVIAFRYA-DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP  308 (361)
T ss_dssp             TTCEEEEEEEE-TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC
T ss_pred             CCCeEEEEEec-CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC
Confidence            68999999998 23223333333   23345679999999999877655  48999999962 033  4444444 4567


Q ss_pred             eEEEecCCCCEEEEEE-CCCcEEEEEc--CCCceEEEe--ecCCceeEEEEc
Q psy8152         279 KDIACPLNENLILSVS-LDRHFRVHDF--HSKKLLRKD--YMQSRLTSILVR  325 (444)
Q Consensus       279 ~~~~~s~~~~~l~s~~-~dg~i~vw~~--~~~~~~~~~--~~~~~i~~~~~~  325 (444)
                      .+++|+|++++|++++ .++.|.+|.+  .++++....  .+...+.|++|.
T Consensus       309 ~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          309 RNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             CEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred             ceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence            8999999999888887 6789999654  567765443  244567888775

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.94  E-value=7.6e-25  Score=199.40  Aligned_cols=269  Identities=12%  Similarity=0.037  Sum_probs=205.7

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccc--cccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCcccccc-cc----C
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFG--EGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNF-NV----G  127 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~--~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~-~~----~  127 (444)
                      .+|++++.++.|++||+.+++.+..+.....  .....+++|+++++ +++..++.|.+||+.+++.+..+. .+    .
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            5789999999999999999988877764321  34457789999765 455567899999999888765332 12    2


Q ss_pred             CCeEEEEEeccCCEEEEee------------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         128 PQLECMKHNKHSNIIATGG------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      ..+.+++|+|++++|++++            .++.|.+||+.+++.+..+....                   .+.+++|
T Consensus        82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~  142 (337)
T 1pby_B           82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-------------------QITMLAW  142 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-------------------SCCCEEE
T ss_pred             ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-------------------CcceeEE
Confidence            2677899999999998886            57999999999888776665433                   3788999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC---------------------
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG---------------------  254 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------------------  254 (444)
                      +|++++|+++  ++.|++||+.   ....+..+..+.. ...+.|+|++++|+..+..+                     
T Consensus       143 s~dg~~l~~~--~~~i~~~d~~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (337)
T 1pby_B          143 ARDGSKLYGL--GRDLHVMDPE---AGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA  216 (337)
T ss_dssp             CTTSSCEEEE--SSSEEEEETT---TTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred             CCCCCEEEEe--CCeEEEEECC---CCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccc
Confidence            9999888877  6899999998   6666666654431 12337899988776544332                     


Q ss_pred             ---cEEEEEcCCCCcce-eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcc
Q psy8152         255 ---DMMAVDLRGKGKPC-YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL  330 (444)
Q Consensus       255 ---~i~iwd~~~~~~~~-~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~  330 (444)
                         .|.+||+.+ ++.. ..+..+...+.+++|+|++++|+++  ++.|++||+.+++.+..+.....+.+++|+++   
T Consensus       217 ~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d---  290 (337)
T 1pby_B          217 YRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTD---  290 (337)
T ss_dssp             EEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTT---
T ss_pred             cccceEEEeCCC-CCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCC---
Confidence               468999998 7664 2333566678899999999999888  79999999999998888877777888888754   


Q ss_pred             cccchhhhhccccccCCCccccCCCcccccc
Q psy8152         331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       331 ~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                            ++++++++.++.|++|++..++...
T Consensus       291 ------g~~l~~~~~~~~i~v~d~~~~~~~~  315 (337)
T 1pby_B          291 ------GSTVWLGGALGDLAAYDAETLEKKG  315 (337)
T ss_dssp             ------SCEEEEESBSSEEEEEETTTCCEEE
T ss_pred             ------CCEEEEEcCCCcEEEEECcCCcEEE
Confidence                  5667777889999999998776544

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.94  E-value=2.1e-23  Score=191.00  Aligned_cols=283  Identities=10%  Similarity=0.059  Sum_probs=189.6

Q ss_pred             ccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc---CCeEEEEeCCCCcccc
Q psy8152           7 YNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS---GQKIKIYDTDFKNFNT   79 (444)
Q Consensus         7 ~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---d~~i~vw~~~~~~~~~   79 (444)
                      +.+++|+.    ++.|++|.+.......   ..+....+...+..++|+ |+++ |++++.   ++.|++|++.+++...
T Consensus         3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~---~~~~~~~~~~~p~~~a~s-pdg~-l~~~~~~~~~~~v~~~~~~~g~~~~   77 (347)
T 3hfq_A            3 ERILFGTYTKKTSQGIYQGTLDTTAKTL---TNDGLLAATQNPTYLALS-AKDC-LYSVDKEDDEGGIAAWQIDGQTAHK   77 (347)
T ss_dssp             EEEEEEECCSSSCCEEEEEEEETTTTEE---EEEEEEEECSCCCCEEEC-TTCE-EEEEEEETTEEEEEEEEEETTEEEE
T ss_pred             cEEEEEeccCCCCCCEEEEEEcCCCCeE---EEeeeeeccCCcceEEEc-cCCe-EEEEEecCCCceEEEEEecCCcEEE
Confidence            45677743    4568888876533212   222222456778899999 7888 665554   5899999997666432


Q ss_pred             --ceeeccccccEEEEEeCCCeEEEEe-cCCcEEEEEcCC-CCcc--ccccc---------cCCCeEEEEEeccCCEEEE
Q psy8152          80 --NTDVSFGEGDIVGVSRYDECILTAV-KSGDVKLWRYKT-EPDQ--WTNFN---------VGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        80 --~~~~~~~~~~v~~~s~~~~~l~~~~-~dg~i~iw~~~~-~~~~--~~~~~---------~~~~v~~~~~~~~~~~l~~  144 (444)
                        .+........-.+++|++++|++++ .++.|.+|++.. +...  .....         +...+.+++|+|+++++++
T Consensus        78 ~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~  157 (347)
T 3hfq_A           78 LNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI  157 (347)
T ss_dssp             EEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE
T ss_pred             eeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE
Confidence              2222233444577899999888887 678999999963 3221  11111         1234889999999997777


Q ss_pred             eeCCCeEEEEEcC-Cceeeee--eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-EeCCceEEEEEcCC-C
Q psy8152         145 GGKENDLKLWDLN-TTKNIFS--AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CSKQGYVRVYDPKI-T  219 (444)
Q Consensus       145 ~~~d~~i~vwd~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~-~  219 (444)
                      ...++.|++|++. .++....  +....                 ...+..++|+|+|++|++ +..++.|++|++.. .
T Consensus       158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~-----------------g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~  220 (347)
T 3hfq_A          158 DLGSDKVYVYNVSDAGQLSEQSVLTMEA-----------------GFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT  220 (347)
T ss_dssp             ETTTTEEEEEEECTTSCEEEEEEEECCT-----------------TCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred             eCCCCEEEEEEECCCCcEEEeeeEEcCC-----------------CCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence            7778999999998 4443221  11111                 114778999999986655 56788999999871 1


Q ss_pred             CCccceEEEeCCC------CCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCC--CcceeEeccccCceeEEEecCCCCEE
Q psy8152         220 TQRRPVLKVDIPD------VALSCITTTNQSHYVI-VGSTTGDMMAVDLRGK--GKPCYKYKGFAGCVKDIACPLNENLI  290 (444)
Q Consensus       220 ~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~--~~~~~~~~~h~~~i~~~~~s~~~~~l  290 (444)
                      .....+..+....      ..+..++|+|+|++|+ +...++.|.+|++...  .+.+..+..+...+..++|+|++++|
T Consensus       221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l  300 (347)
T 3hfq_A          221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV  300 (347)
T ss_dssp             TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred             CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence            1122233333222      3478899999999875 4556899999999731  24556666666678999999999988


Q ss_pred             EEEECC-CcEEEE--EcCCCceEE
Q psy8152         291 LSVSLD-RHFRVH--DFHSKKLLR  311 (444)
Q Consensus       291 ~s~~~d-g~i~vw--~~~~~~~~~  311 (444)
                      ++++.+ +.|.+|  +..++++..
T Consensus       301 ~v~~~~~~~v~v~~~d~~tg~l~~  324 (347)
T 3hfq_A          301 VVVNQNTDNATLYARDLTSGKLSL  324 (347)
T ss_dssp             EEEETTTTEEEEEEECTTTCCEEE
T ss_pred             EEEEcCCCcEEEEEEeCCCCeEEe
Confidence            888765 899999  555676653

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.94  E-value=1.4e-24  Score=226.66  Aligned_cols=324  Identities=13%  Similarity=0.077  Sum_probs=233.7

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC------CeEEEEeCCCCccccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG------QKIKIYDTDFKNFNTN   80 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~~~~~~~~   80 (444)
                      ..|+.++. +.|++|++..++.     ..+.  .|...|.+++|| |++++|++++.+      ..|++|++.+++. ..
T Consensus        25 ~~iaf~~~-~~l~~~~~~gg~~-----~~lt--~~~~~v~~~~~S-PDG~~la~~s~~~~~~~~~~i~~~d~~~g~~-~~   94 (1045)
T 1k32_A           25 DRIIFVCC-DDLWEHDLKSGST-----RKIV--SNLGVINNARFF-PDGRKIAIRVMRGSSLNTADLYFYNGENGEI-KR   94 (1045)
T ss_dssp             TEEEEEET-TEEEEEETTTCCE-----EEEE--CSSSEEEEEEEC-TTSSEEEEEEEESTTCCEEEEEEEETTTTEE-EE
T ss_pred             CEEEEEEC-CcEEEEECCCCcE-----EEee--eCCCcccCeEEC-CCCCEEEEEEeeccCCCCCeEEEEECCCCCe-EE
Confidence            35555554 6899999987762     2232  789999999999 799999987653      4799999988764 33


Q ss_pred             eeecccccc---------EEEEEeCCCeEEEEecC------CcEEEEEcCCCCccc------------------------
Q psy8152          81 TDVSFGEGD---------IVGVSRYDECILTAVKS------GDVKLWRYKTEPDQW------------------------  121 (444)
Q Consensus        81 ~~~~~~~~~---------v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~------------------------  121 (444)
                      +.  .|...         ..+|+|+|+++++++.+      ..|.+|++.+++...                        
T Consensus        95 lt--~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~  172 (1045)
T 1k32_A           95 IT--YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFE  172 (1045)
T ss_dssp             CC--CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSC
T ss_pred             cc--cCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCC
Confidence            33  44444         46678999977777644      357788876554221                        


Q ss_pred             -------------------------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEe
Q psy8152         122 -------------------------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVY  175 (444)
Q Consensus       122 -------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~  175 (444)
                                               .+..|...+.++.|+++ .++++++.++.++||.+.. +.....+..+. .+...
T Consensus       173 ~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~  250 (1045)
T 1k32_A          173 LPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPR  250 (1045)
T ss_dssp             CTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEE
T ss_pred             ccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Cccee
Confidence                                     11235666778888877 6667777888899998754 33333333332 22333


Q ss_pred             eeCCCcccc---------------------c------------CccceeEEEEe-cCCCEEEEEeCCceEEEEEcCCCCC
Q psy8152         176 SVKPDEFDL---------------------R------------RPVWVNGISFL-PNSDKVAVCSKQGYVRVYDPKITTQ  221 (444)
Q Consensus       176 ~~~~~~~~~---------------------~------------~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~  221 (444)
                      .++|++..+                     .            +...+.+++|+ |+|++|++++ ++.|++|++.   .
T Consensus       251 ~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~---~  326 (1045)
T 1k32_A          251 HLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS---G  326 (1045)
T ss_dssp             EEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT---S
T ss_pred             eEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC---C
Confidence            455543210                     0            11258899999 9999888887 7899999988   3


Q ss_pred             ccceEEEeCCCC-CeeEEEEccCCCEEEEEcCCCcEE-EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcE
Q psy8152         222 RRPVLKVDIPDV-ALSCITTTNQSHYVIVGSTTGDMM-AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHF  299 (444)
Q Consensus       222 ~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i  299 (444)
                      .. ...+..+.. .+..++|+ +|+.|++++.++.|. +|++.. ++.. .+.+|...+..++|+|+|++|++++.++.|
T Consensus       327 ~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v  402 (1045)
T 1k32_A          327 TY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEI  402 (1045)
T ss_dssp             SB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred             Cc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CCce-EecCCccceeeeEECCCCCEEEEECCCCeE
Confidence            33 334566666 78999999 999999988888888 999887 5543 444788899999999999999999999999


Q ss_pred             EEEEcCCCceEEEe-ecCCceeEEEEcCCCcccccchhhhhccccccC----------CCccccCCCcccccc
Q psy8152         300 RVHDFHSKKLLRKD-YMQSRLTSILVRSDFSLENETKKEEQEHSEEKG----------DSDEKYDPEHFEMNQ  361 (444)
Q Consensus       300 ~vw~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d----------~~i~~W~~~~~~~~~  361 (444)
                      ++||+.++++.... .+...+.+++|+++         ++++++++.+          +.|++|++.+++...
T Consensus       403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpD---------G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~  466 (1045)
T 1k32_A          403 MTVDLETGKPTVIERSREAMITDFTISDN---------SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA  466 (1045)
T ss_dssp             EEEETTTCCEEEEEECSSSCCCCEEECTT---------SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE
T ss_pred             EEEECCCCceEEeccCCCCCccceEECCC---------CCeEEEEecCccccccCCCCCeEEEEECCCCcEEE
Confidence            99999999887766 47778889988754         5677766654          489999998766433

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=1.5e-24  Score=193.44  Aligned_cols=254  Identities=9%  Similarity=-0.049  Sum_probs=186.4

Q ss_pred             EEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCC-CCcccccccc-CCCeEEEEEec
Q psy8152          60 IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKT-EPDQWTNFNV-GPQLECMKHNK  137 (444)
Q Consensus        60 ~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~-~~~v~~~~~~~  137 (444)
                      .++.++.|++|++.+++...... +.......+++|++++|++++ ++.|++|++.+ ++.......+ ...+.+++|+|
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp   94 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVWQ-TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP   94 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEEE-ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred             CCCcceeEEEEeCCCCceeeecc-CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence            34678999999999888765442 222333455689999999876 78999999998 7776544444 47789999999


Q ss_pred             cCCEEEEee--CCCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEE
Q psy8152         138 HSNIIATGG--KENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVR  212 (444)
Q Consensus       138 ~~~~l~~~~--~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~  212 (444)
                      ++++|++++  .++.+.||.+  .+++ ...+..+.                   .+..++|+|++++|+ ++..++.++
T Consensus        95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-------------------~~~~~~~spdg~~l~~~~~~~~~~~  154 (297)
T 2ojh_A           95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-------------------PSYWHGWSPDGKSFTYCGIRDQVFD  154 (297)
T ss_dssp             TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-------------------SEEEEEECTTSSEEEEEEEETTEEE
T ss_pred             CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-------------------CccceEECCCCCEEEEEECCCCceE
Confidence            999999998  3344555544  4443 23332222                   388899999998777 778899999


Q ss_pred             EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152         213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL  291 (444)
Q Consensus       213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~  291 (444)
                      +|++.  ........+..+...+.+++|+|++++|++++ .++.++||++...+..+..+..|...+..++|+|++++|+
T Consensus       155 l~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~  232 (297)
T 2ojh_A          155 IYSMD--IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVV  232 (297)
T ss_dssp             EEEEE--TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEE
T ss_pred             EEEEE--CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEE
Confidence            99975  12334455667778899999999999887655 5899999998732667788888888899999999999998


Q ss_pred             EEECC-----------CcEEEEEcCCCceEEEe---ecCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152         292 SVSLD-----------RHFRVHDFHSKKLLRKD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKG  346 (444)
Q Consensus       292 s~~~d-----------g~i~vw~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d  346 (444)
                      +++.+           +.|++|++.+++.....   .+...+.+++|+         |+++++++++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s---------pdg~~l~~~~~~  292 (297)
T 2ojh_A          233 FVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWS---------PDGDEFAYVRYF  292 (297)
T ss_dssp             EEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBC---------TTSSEEEEEEEC
T ss_pred             EEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceEC---------CCCCEEEEEEec
Confidence            88766           56999999987654332   356677777665         445666666554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.93  E-value=1.1e-23  Score=192.15  Aligned_cols=271  Identities=10%  Similarity=0.099  Sum_probs=182.9

Q ss_pred             cEEEE-EEcCCeEEEEeCC-CCcc--ccceeeccccccEEEEEeCCCeEEEEecC-CcEEEEEcC--CCCccc-cccccC
Q psy8152          56 SELLI-AYSGQKIKIYDTD-FKNF--NTNTDVSFGEGDIVGVSRYDECILTAVKS-GDVKLWRYK--TEPDQW-TNFNVG  127 (444)
Q Consensus        56 ~~l~~-~~~d~~i~vw~~~-~~~~--~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-g~i~iw~~~--~~~~~~-~~~~~~  127 (444)
                      .++++ ++.++.|++|++. ++..  +..+. +.......+++|++++|++++.+ +.|++|++.  +++... ......
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   83 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD-VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP   83 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence            44444 4779999999985 3322  22221 22234446778999988888886 999999997  554331 122223


Q ss_pred             CCeEEEEEeccCCEEEEeeC-CCeEEEEEcC---CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         128 PQLECMKHNKHSNIIATGGK-ENDLKLWDLN---TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      ..+.+++|+|++++|++++. ++.|.+|++.   ..+.+..+....                   .+.+++|+|++++|+
T Consensus        84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~  144 (343)
T 1ri6_A           84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-------------------GCHSANISPDNRTLW  144 (343)
T ss_dssp             SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-------------------TBCCCEECTTSSEEE
T ss_pred             CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-------------------CceEEEECCCCCEEE
Confidence            47899999999998876664 8899999994   334444433332                   388899999998888


Q ss_pred             EEe-CCceEEEEEcCCCCCccceE--EEeC-CCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-Ccc--eeEec---
Q psy8152         204 VCS-KQGYVRVYDPKITTQRRPVL--KVDI-PDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-GKP--CYKYK---  272 (444)
Q Consensus       204 ~~~-~d~~i~i~d~~~~~~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-~~~--~~~~~---  272 (444)
                      +++ .++.|++|++........+.  .+.. ....+..++|+|++++|++ +..++.|++|++... ++.  +..+.   
T Consensus       145 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~  224 (343)
T 1ri6_A          145 VPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP  224 (343)
T ss_dssp             EEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred             EecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC
Confidence            776 89999999998112222222  2333 3446788999999997765 558899999999531 322  22222   


Q ss_pred             -cc--cCceeEEEecCCCCEEEEE-ECCCcEEEEEcC--C--CceEEEeecCCceeEEEEcCCCcccccchhhhhccccc
Q psy8152         273 -GF--AGCVKDIACPLNENLILSV-SLDRHFRVHDFH--S--KKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEE  344 (444)
Q Consensus       273 -~h--~~~i~~~~~s~~~~~l~s~-~~dg~i~vw~~~--~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~  344 (444)
                       ++  ...+..++|+|++++|+++ ..++.|++|++.  +  .+.+..+.....+.+++|+++         +++++.++
T Consensus       225 ~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~~  295 (343)
T 1ri6_A          225 ENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHS---------GKYLIAAG  295 (343)
T ss_dssp             TTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTT---------SSEEEEEC
T ss_pred             ccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCC---------CCEEEEec
Confidence             11  2356689999999877754 478999999998  3  344444544455888888754         45555554


Q ss_pred             -cCCCccccCCC
Q psy8152         345 -KGDSDEKYDPE  355 (444)
Q Consensus       345 -~d~~i~~W~~~  355 (444)
                       .++.+.+|++.
T Consensus       296 ~~~~~v~v~~~d  307 (343)
T 1ri6_A          296 QKSHHISVYEIV  307 (343)
T ss_dssp             TTTCEEEEEEEE
T ss_pred             CCCCeEEEEEEc
Confidence             68999999554

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.93  E-value=6.8e-24  Score=221.47  Aligned_cols=278  Identities=14%  Similarity=0.041  Sum_probs=213.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +|...+.++.|+ ++ .++++++.++.++||.+.. +.....+..+ ......+++|+|++|+++ .++.|++|++...+
T Consensus       201 ~~~~~v~~~~~s-~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~-~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~  276 (1045)
T 1k32_A          201 DMSTHVSSPVIV-GH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSF-TDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK  276 (1045)
T ss_dssp             CCSSCCEEEEEE-TT-EEEEEECTTSSCEEEEEETTSCSCEECCCC-CSSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred             CCCCcccceEEe-CC-EEEEEEeccCceEEEEEeCCCCcceEecCC-CCcceeeEcCCCCEEEEE-eCCEEEEecCCceE
Confidence            688899999999 55 6667788889999998653 3333333221 134466889999999887 58899999985433


Q ss_pred             ccccccc-----------cCCCeEEEEEe-ccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccC
Q psy8152         119 DQWTNFN-----------VGPQLECMKHN-KHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       119 ~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      .. .+..           |...+.+++|+ |++++|++++ ++.|.+|++..+.... +..+..                
T Consensus       277 l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~----------------  337 (1045)
T 1k32_A          277 IE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLR----------------  337 (1045)
T ss_dssp             EE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSC----------------
T ss_pred             ee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCc----------------
Confidence            32 2222           34478999999 9999999888 7899999998776443 222211                


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEE-EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVR-VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG  265 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  265 (444)
                       ..+..++|+ +++.|++++.++.+. +|++.   ... ...+..|...+..++|+|+|++|++++.++.|++||+.+ +
T Consensus       338 -~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~---~~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g  410 (1045)
T 1k32_A          338 -IRYVRRGGD-TKVAFIHGTREGDFLGIYDYR---TGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-G  410 (1045)
T ss_dssp             -EEEEEECSS-SEEEEEEEETTEEEEEEEETT---TCC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-C
T ss_pred             -ceEEeeeEc-CCCeEEEEECCCceEEEEECC---CCC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-C
Confidence             148899999 999999988888898 99988   332 333447778899999999999999999999999999998 8


Q ss_pred             cceeEeccccCceeEEEecCCCCEEEEEECCC----------cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccch
Q psy8152         266 KPCYKYKGFAGCVKDIACPLNENLILSVSLDR----------HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETK  335 (444)
Q Consensus       266 ~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg----------~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  335 (444)
                      +....+.+|...+.+++|+|+|++|++++.++          .|++|++.+++......+...+..++|+         |
T Consensus       411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~s---------p  481 (1045)
T 1k32_A          411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD---------A  481 (1045)
T ss_dssp             CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEEC---------T
T ss_pred             ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEc---------C
Confidence            88877778999999999999999998887654          8999999998844333466677777776         4


Q ss_pred             hhhhccccccCCCccccCCCc
Q psy8152         336 KEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       336 ~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      ++++++..+.++..++|+...
T Consensus       482 dG~~l~~~s~~~~~~~~~~~~  502 (1045)
T 1k32_A          482 DSKNLYYLSYRSLDPSPDRVV  502 (1045)
T ss_dssp             TSCEEEEEESCCCCCEECSSS
T ss_pred             CCCEEEEEecccCCcCcchhc
Confidence            467788888888888887653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=3.2e-24  Score=216.00  Aligned_cols=298  Identities=8%  Similarity=0.006  Sum_probs=200.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc---ceEEEeeeccCCcEEEEEEcC---------CeEEEEeC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA---SVLALNWGNVEESELLIAYSG---------QKIKIYDT   72 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~d---------~~i~vw~~   72 (444)
                      ++.++++ +.+|.|++|++.+++..    ..+.  .|..   .|.+++|| |++++|++++.+         +.|++|++
T Consensus        27 dg~~~~~-~~dg~i~~~d~~~g~~~----~~~~--~~~~~~~~v~~~~~S-pDg~~l~~~~~~~~~~~~~~~~~i~~~d~   98 (723)
T 1xfd_A           27 DTEFIYR-EQKGTVRLWNVETNTST----VLIE--GKKIESLRAIRYEIS-PDREYALFSYNVEPIYQHSYTGYYVLSKI   98 (723)
T ss_dssp             SSCBCCC-CSSSCEEEBCGGGCCCE----EEEC--TTTTTTTTCSEEEEC-TTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred             CCcEEEE-eCCCCEEEEECCCCcEE----EEec--cccccccccceEEEC-CCCCEEEEEecCccceeecceeeEEEEEC
Confidence            4455554 78999999999988741    1222  3443   49999999 799999998764         78889999


Q ss_pred             CCCccccceeecccc--ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC------------------eEE
Q psy8152          73 DFKNFNTNTDVSFGE--GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ------------------LEC  132 (444)
Q Consensus        73 ~~~~~~~~~~~~~~~--~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~------------------v~~  132 (444)
                      .+++.........|.  ....+++|+|++|++++. +.|++|++.+++.......+...                  +.+
T Consensus        99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~  177 (723)
T 1xfd_A           99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA  177 (723)
T ss_dssp             SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred             CCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence            988763222212232  233567999999999876 79999999988776534433333                  378


Q ss_pred             EEEeccCCEEEEeeCCC----------------------------------eEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152         133 MKHNKHSNIIATGGKEN----------------------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~d~----------------------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  178 (444)
                      ++|+|+|+.|++++.++                                  .|++||+.+++....+..+..        
T Consensus       178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~--------  249 (723)
T 1xfd_A          178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD--------  249 (723)
T ss_dssp             EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC--------
T ss_pred             EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc--------
Confidence            99999999999987553                                  688888877665444433210        


Q ss_pred             CCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeC-CCCCe----eEEEEccCCCEEEE
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDI-PDVAL----SCITTTNQSHYVIV  249 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~-~~~~i----~~~~~~~~~~~l~~  249 (444)
                          .......+.+++|+|+|++|++...    +..|++||+.   .++....+.. +...+    ..++|+|+|+.|+.
T Consensus       250 ----~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~  322 (723)
T 1xfd_A          250 ----PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT---TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFF  322 (723)
T ss_dssp             ----GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT---TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEE
T ss_pred             ----CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC---CCcceEEEEeccCCEEeccCCCceEcCCCCeEEE
Confidence                0001225899999999998876643    4689999998   4444433322 23333    37899999997765


Q ss_pred             --EcCCC------cEEEEEcCCCCcc---eeEeccccCceeE-EEecCCCCEEEEEECC---CcEEEEEcCCCc--eEEE
Q psy8152         250 --GSTTG------DMMAVDLRGKGKP---CYKYKGFAGCVKD-IACPLNENLILSVSLD---RHFRVHDFHSKK--LLRK  312 (444)
Q Consensus       250 --~~~dg------~i~iwd~~~~~~~---~~~~~~h~~~i~~-~~~s~~~~~l~s~~~d---g~i~vw~~~~~~--~~~~  312 (444)
                        +..++      .|++||+.. +..   ...+..+...+.. ++|+|++++|+..+.+   +.++||++....  ....
T Consensus       323 ~~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~  401 (723)
T 1xfd_A          323 IRAIPQGGRGKFYHITVSSSQP-NSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQC  401 (723)
T ss_dssp             EEEECCSSSSCEEEEEEECSSC-CSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBC
T ss_pred             EEecccCCCcceeEEEEEeccC-CCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcce
Confidence              44566      577777333 333   5556544444554 6999999998876655   789999986532  2222


Q ss_pred             ee----cCCceeEEEEcCC
Q psy8152         313 DY----MQSRLTSILVRSD  327 (444)
Q Consensus       313 ~~----~~~~i~~~~~~~~  327 (444)
                      +.    +...+..++|+++
T Consensus       402 l~~~~~~~~~~~~~~~spd  420 (723)
T 1xfd_A          402 LSCDLVENCTYFSASFSHS  420 (723)
T ss_dssp             SSTTSSSSCCCCEEEECTT
T ss_pred             ecccccCCCCeEEEEECCC
Confidence            32    3556788888865

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.93  E-value=1.2e-23  Score=211.24  Aligned_cols=274  Identities=11%  Similarity=0.115  Sum_probs=198.5

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-----Cccccce
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-----KNFNTNT   81 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-----~~~~~~~   81 (444)
                      ..++.+ .++.|++|++.+++.     ..+.  .+...+.+++|+ |++++|+++ .++.|++|++.+     ++.....
T Consensus        93 ~~~~~~-~~~~i~~~d~~~~~~-----~~l~--~~~~~~~~~~~S-pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~  162 (706)
T 2z3z_A           93 GLVVLF-TQGGLVGFDMLARKV-----TYLF--DTNEETASLDFS-PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT  162 (706)
T ss_dssp             TEEEEE-ETTEEEEEETTTTEE-----EEEE--CCTTCCTTCEEC-TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC
T ss_pred             CeEEEE-ECCEEEEEECCCCce-----EEcc--CCcccccCCcCC-CCCCEEEEE-ECCeEEEEecCcccccCCCcEEec
Confidence            344444 459999999988762     2222  456778999999 799999985 679999999988     7765543


Q ss_pred             eecccc--------------ccEEEEEeCCCeEEEEe---------------------------------cCCcEEEEEc
Q psy8152          82 DVSFGE--------------GDIVGVSRYDECILTAV---------------------------------KSGDVKLWRY  114 (444)
Q Consensus        82 ~~~~~~--------------~~v~~~s~~~~~l~~~~---------------------------------~dg~i~iw~~  114 (444)
                      ......              .....++|+|++|++++                                 .+..|++||+
T Consensus       163 ~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~  242 (706)
T 2z3z_A          163 IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL  242 (706)
T ss_dssp             SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET
T ss_pred             cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC
Confidence            321111              24567899999999987                                 4467999999


Q ss_pred             CCCCcccccc--ccCCCeEEEEEeccCCEEEEeeCCC-----eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         115 KTEPDQWTNF--NVGPQLECMKHNKHSNIIATGGKEN-----DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       115 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      .+++......  .|...+.+++|+|+++.|++++.++     .|++||+.+++....+.....        +     ...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~--------~-----~~~  309 (706)
T 2z3z_A          243 ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD--------K-----HYV  309 (706)
T ss_dssp             TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC--------S-----SCC
T ss_pred             CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC--------C-----CeE
Confidence            9887654332  4667899999999999999987775     899999998843333321111        0     000


Q ss_pred             cceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE-EEEccCCCEEEEE-cCCC----cEEEE
Q psy8152         188 VWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC-ITTTNQSHYVIVG-STTG----DMMAV  259 (444)
Q Consensus       188 ~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~-~~dg----~i~iw  259 (444)
                      ..+.+++|+|  ++++|+++..++.++||.+.  .....+..+..+...+.. ++|+|+++.|+.+ +.++    .|+.|
T Consensus       310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~--~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  387 (706)
T 2z3z_A          310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD--TTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI  387 (706)
T ss_dssp             CCCSCCEECTTCSSEEEEEECTTSSCEEEEEE--TTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred             CccCCceeecCCCCEEEEEEccCCccEEEEEE--CCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence            0246789999  99999999999999999876  234556666777777776 7999999887664 4444    67777


Q ss_pred             EcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC----CcEEEEEcCCCc
Q psy8152         260 DLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD----RHFRVHDFHSKK  308 (444)
Q Consensus       260 d~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d----g~i~vw~~~~~~  308 (444)
                      ++.+ +. +..+. |...+.+++|+|++++|+..+.+    +.|++|++.+++
T Consensus       388 d~~~-~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          388 DIKG-GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             ETTC-CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             EcCC-CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            7776 54 44444 66779999999999988876544    569999998876

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.93  E-value=4.4e-23  Score=189.07  Aligned_cols=264  Identities=10%  Similarity=0.075  Sum_probs=198.3

Q ss_pred             CcccEEEecC-------CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCCCc
Q psy8152           5 DDYNIYIGSS-------TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDFKN   76 (444)
Q Consensus         5 ~~~~l~~g~~-------dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~   76 (444)
                      +++.|++++.       ++.|.+|+..+++. .   ..+.   ....+.+++|+ +++++++++ ..++.|.+||+.+++
T Consensus        51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-~---~~~~---~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~  122 (353)
T 3vgz_A           51 QENALWLATSQSRKLDKGGVVYRLDPVTLEV-T---QAIH---NDLKPFGATIN-NTTQTLWFGNTVNSAVTAIDAKTGE  122 (353)
T ss_dssp             TTTEEEEEECCCTTTEESEEEEEECTTTCCE-E---EEEE---ESSCCCSEEEE-TTTTEEEEEETTTTEEEEEETTTCC
T ss_pred             CCCEEEEEcCCCcCCCCCccEEEEcCCCCeE-E---EEEe---cCCCcceEEEC-CCCCEEEEEecCCCEEEEEeCCCCe
Confidence            4456666663       56899999988764 1   2222   23457889999 788866554 557999999999999


Q ss_pred             cccceeecccc---------ccEEEEEeCCCeEEEEe--cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe
Q psy8152          77 FNTNTDVSFGE---------GDIVGVSRYDECILTAV--KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG  145 (444)
Q Consensus        77 ~~~~~~~~~~~---------~~v~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  145 (444)
                      .+..+......         ..-..++|+++++++++  .++.|.+||+.+++.+..+..+...+.+++|+|++++|+++
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~  202 (353)
T 3vgz_A          123 VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTT  202 (353)
T ss_dssp             EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEE
T ss_pred             eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEE
Confidence            88777643211         23356789999877776  47889999999988876444466678999999999999999


Q ss_pred             eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCCCCccc
Q psy8152         146 GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRP  224 (444)
Q Consensus       146 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~  224 (444)
                      +.++.|.+||+.+++.+..+.....              .....+.+++|+|++++|++++. ++.|.+||+.   ..+.
T Consensus       203 ~~~~~i~~~d~~~~~~~~~~~~~~~--------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~---~~~~  265 (353)
T 3vgz_A          203 NADGELITIDTADNKILSRKKLLDD--------------GKEHFFINISLDTARQRAFITDSKAAEVLVVDTR---NGNI  265 (353)
T ss_dssp             CTTSEEEEEETTTTEEEEEEECCCS--------------SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT---TCCE
T ss_pred             cCCCeEEEEECCCCeEEEEEEcCCC--------------CCCcccceEEECCCCCEEEEEeCCCCEEEEEECC---CCcE
Confidence            9999999999999888776654111              01125788999999987766654 5999999998   6666


Q ss_pred             eEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152         225 VLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       225 ~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      +..+....  ...++|+|+++++++ ...++.|.+||+.+ ++.+..+..+ ..+.+++|+|++++|+++...+
T Consensus       266 ~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          266 LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS-YKVVKTFDTP-THPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC-CeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence            66666443  257999999996655 44789999999999 8888888753 4678999999999777766553

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.92  E-value=2.2e-24  Score=217.16  Aligned_cols=295  Identities=8%  Similarity=0.003  Sum_probs=199.4

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecccc-----ccEEEEEeCCCeEEEEecC---------Cc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE-----GDIVGVSRYDECILTAVKS---------GD  108 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-----~~v~~~s~~~~~l~~~~~d---------g~  108 (444)
                      ..+.+++|+ |+++++++ +.||+|++|++.+++....+.  .|.     ..-.+|+|+|++|++++.+         +.
T Consensus        17 ~~~~~~~~s-pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~--~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~   92 (723)
T 1xfd_A           17 IHDPEAKWI-SDTEFIYR-EQKGTVRLWNVETNTSTVLIE--GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY   92 (723)
T ss_dssp             CCCCCCCBS-SSSCBCCC-CSSSCEEEBCGGGCCCEEEEC--TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred             ccccccEEc-CCCcEEEE-eCCCCEEEEECCCCcEEEEec--cccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence            457889999 78987766 788999999999998776654  333     3456789999999998764         78


Q ss_pred             EEEEEcCCCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc-ccc
Q psy8152         109 VKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF-DLR  185 (444)
Q Consensus       109 i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  185 (444)
                      |++||+.+++...  ....|...+..++|+|+|+.|++++. +.|++|++.+++.......+...+.... .++.. ...
T Consensus        93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g-~~~~v~~ee  170 (723)
T 1xfd_A           93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNG-LSDWLYEEE  170 (723)
T ss_dssp             EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEE-ECCHHHHHT
T ss_pred             EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECc-ccceeEEEE
Confidence            8899999887632  12234555899999999999999886 7999999998776554433222000000 00000 000


Q ss_pred             CccceeEEEEecCCCEEEEEeCCc----------------------------------eEEEEEcCCCCCccceEEEeCC
Q psy8152         186 RPVWVNGISFLPNSDKVAVCSKQG----------------------------------YVRVYDPKITTQRRPVLKVDIP  231 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~~~~~~~  231 (444)
                      ....+.+++|+|+|++|++++.++                                  .|++||+.   .......+..+
T Consensus       171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~---~~~~~~~l~~~  247 (723)
T 1xfd_A          171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN---GPTHDLEMMPP  247 (723)
T ss_dssp             TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS---SSCCCEECCCC
T ss_pred             eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC---CCceeEEeeCC
Confidence            001247899999999999887543                                  89999998   44444445443


Q ss_pred             ------CCCeeEEEEccCCCEEEEEcC----CCcEEEEEcCCCCcceeEecc-ccCce----eEEEecCCCCEEEE--EE
Q psy8152         232 ------DVALSCITTTNQSHYVIVGST----TGDMMAVDLRGKGKPCYKYKG-FAGCV----KDIACPLNENLILS--VS  294 (444)
Q Consensus       232 ------~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~-h~~~i----~~~~~s~~~~~l~s--~~  294 (444)
                            ...+..++|+|+|++|++...    +..|++||+.+ +++...+.. +...+    ..++|+|+|+.|+.  +.
T Consensus       248 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~  326 (723)
T 1xfd_A          248 DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI  326 (723)
T ss_dssp             CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred             ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec
Confidence                  557889999999998877543    35799999998 877666553 33444    37899999997765  45


Q ss_pred             CCC------cEEEEE-cCCCce--EEEee-cCCceeE-EEEcCCCcccccchhhhhcccc-ccC--CCccccCCCc
Q psy8152         295 LDR------HFRVHD-FHSKKL--LRKDY-MQSRLTS-ILVRSDFSLENETKKEEQEHSE-EKG--DSDEKYDPEH  356 (444)
Q Consensus       295 ~dg------~i~vw~-~~~~~~--~~~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~~~s~-~~d--~~i~~W~~~~  356 (444)
                      .++      .|++|+ ..+++.  ...+. ....+.. ++|+         |+++.++.. ..+  +.++||.+..
T Consensus       327 ~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s---------pdg~~l~~~~~~~~~~~~~l~~~~~  393 (723)
T 1xfd_A          327 PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD---------EKGNKIYFLSTEDLPRRRQLYSANT  393 (723)
T ss_dssp             CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE---------TTTTEEEEEESSSCTTCCEEEEECS
T ss_pred             ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc---------CCCCEEEEEEcCCCCcceEEEEEeC
Confidence            666      577777 444441  33333 2333443 4666         445666544 444  7899998763

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.92  E-value=2.9e-22  Score=183.31  Aligned_cols=297  Identities=10%  Similarity=-0.013  Sum_probs=193.3

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEE-EEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      .++..+++++.++.|++|++.+++.    ...+.. +....+..++|+ |+++++++ +..++.|++|++.+++....+.
T Consensus         9 ~~~~~~v~~~~~~~v~~~d~~~~~~----~~~~~~-~~~~~~~~~~~s-~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~   82 (349)
T 1jmx_B            9 AGHEYMIVTNYPNNLHVVDVASDTV----YKSCVM-PDKFGPGTAMMA-PDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   82 (349)
T ss_dssp             TTCEEEEEEETTTEEEEEETTTTEE----EEEEEC-SSCCSSCEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             CCCEEEEEeCCCCeEEEEECCCCcE----EEEEec-CCCCCCceeEEC-CCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence            4567788889999999999988764    122221 222257899999 78886654 4568999999999888877665


Q ss_pred             eccc------cccEEEEEeCCCeEEEEecC------------CcEEEEEcCCCCccc--cccccCCCeEEEEEeccCCEE
Q psy8152          83 VSFG------EGDIVGVSRYDECILTAVKS------------GDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        83 ~~~~------~~~v~~~s~~~~~l~~~~~d------------g~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      ....      ...-.+++|++++|++++.+            +.|.+||+.+++...  ....+...+.+++|+|+++ +
T Consensus        83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l  161 (349)
T 1jmx_B           83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-L  161 (349)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred             cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-E
Confidence            3221      13446789999999988865            899999998854432  2334555789999999998 5


Q ss_pred             EEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc-------ccccCccceeEEEEecCCCEEEEEe-CCceEEEE
Q psy8152         143 ATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE-------FDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVY  214 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~  214 (444)
                      ++++.  .|.+||+.+++.+..+........ ....|+.       ...........+++++++....... ....+..+
T Consensus       162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  238 (349)
T 1jmx_B          162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRK-GYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV  238 (349)
T ss_dssp             EEESS--SEEEECTTTCCEEEEECSTTCCCT-TBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred             EEccC--cEEEEeCCCCceeccccccccCCc-cccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence            55543  499999999887766543321000 0000000       0000001244566665542111000 01111224


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      +.. +. ......+..+...+..++|+| ++++|+++  ++.|++||+.+ ++.+..+.. ...+.+++|+|++++|+++
T Consensus       239 ~~~-~~-~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~  312 (349)
T 1jmx_B          239 DLK-TG-KTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDKLYLG  312 (349)
T ss_dssp             ETT-TC-CEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSCEEEE
T ss_pred             ecc-CC-cEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECCCCCEEEEe
Confidence            443 11 111122223455688999999 99999988  88999999999 888887763 3457799999999988888


Q ss_pred             ECCCcEEEEEcCCCceEEEeecC
Q psy8152         294 SLDRHFRVHDFHSKKLLRKDYMQ  316 (444)
Q Consensus       294 ~~dg~i~vw~~~~~~~~~~~~~~  316 (444)
                      +.++.|++||+.+++.+..+...
T Consensus       313 ~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          313 GTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             SBSSEEEEEETTTTEEEEEEECS
T ss_pred             cCCCeEEEEeccccceeeeeecC
Confidence            88999999999999888776543

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.91  E-value=6e-23  Score=201.30  Aligned_cols=268  Identities=12%  Similarity=-0.021  Sum_probs=191.4

Q ss_pred             cccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceeecccc-ccEEEE--EeCCCeEEEEec---CCcEEEEE
Q psy8152          41 NKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDVSFGE-GDIVGV--SRYDECILTAVK---SGDVKLWR  113 (444)
Q Consensus        41 h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~--s~~~~~l~~~~~---dg~i~iw~  113 (444)
                      +..+|++++|+ |++++||+++. +|+++||++.+++.....   .+. ..+..+  +|+ +++++++.   +...++|.
T Consensus        20 ~~~~~~~~~~~-~DG~~la~~s~~~g~~~lw~~~~g~~~~lt---~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~   94 (582)
T 3o4h_A           20 IAVEKYSLQGV-VDGDKLLVVGFSEGSVNAYLYDGGETVKLN---REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK   94 (582)
T ss_dssp             HHSCEEEEEEE-ETTTEEEEEEEETTEEEEEEEETTEEEECC---SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred             hccchheeecC-CCCCeEEEEEccCCceeEEEEcCCCcEeee---cccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence            35689999999 79999999887 999999999766654433   233 345444  667 66776665   45566665


Q ss_pred             cCC---CCccccccccCCCeEEEEEeccCCE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         114 YKT---EPDQWTNFNVGPQLECMKHNKHSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       114 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      +..   +... .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++.......  .                   
T Consensus        95 ~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~--~-------------------  151 (582)
T 3o4h_A           95 VNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL--P-------------------  151 (582)
T ss_dssp             EETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE--S-------------------
T ss_pred             EeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC--C-------------------
Confidence            543   2222 2222 223456788887753 33333444556999988765443321  1                   


Q ss_pred             eeEEEEecCCCEEEEEeCC----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--cEEEEEcCC
Q psy8152         190 VNGISFLPNSDKVAVCSKQ----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--DMMAVDLRG  263 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~  263 (444)
                      ..+++|+|+|++|++++.+    +.|++||+.   .... ..+..+...+..++|+|+|++|+++..++  .|++||+.+
T Consensus       152 ~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~---~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~  227 (582)
T 3o4h_A          152 GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS---SGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD  227 (582)
T ss_dssp             SCEEEEEEETTEEEEEEEEETTEEEEEEEETT---TCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred             CceEEECCCCCEEEEEEEcCCCCeEEEEEcCC---CCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence            2678999999999988777    789999988   3333 35677888899999999999999888888  899999998


Q ss_pred             CCcceeEeccccCceeEEE--------ecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccch
Q psy8152         264 KGKPCYKYKGFAGCVKDIA--------CPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETK  335 (444)
Q Consensus       264 ~~~~~~~~~~h~~~i~~~~--------~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  335 (444)
                       +++. .+.+|...+..++        |+|+|.++++++.++++++|++  ++++.  ...+.+.+++|+ +        
T Consensus       228 -~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-d--------  292 (582)
T 3o4h_A          228 -GSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-R--------  292 (582)
T ss_dssp             -CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-T--------
T ss_pred             -CcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-C--------
Confidence             7777 7777877777777        9999999999999999999999  66544  334667778776 3        


Q ss_pred             hhhhccccccCC---CccccCCCc
Q psy8152         336 KEEQEHSEEKGD---SDEKYDPEH  356 (444)
Q Consensus       336 ~~~~~~s~~~d~---~i~~W~~~~  356 (444)
                       +..+++++.+.   .+.+|+...
T Consensus       293 -g~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          293 -GKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             -TEEEEEEEETTEEEEEEEETTCC
T ss_pred             -CEEEEEEcCCCCCCeEEEEcCCC
Confidence             24556555553   366666553

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.91  E-value=1.9e-21  Score=177.91  Aligned_cols=287  Identities=11%  Similarity=0.116  Sum_probs=183.6

Q ss_pred             EEEEEE----cCCeEEEEeCC--CCccccce-eeccccccEEEEEeCCCeEEEEec---CCcEEEEEcCCCCcc--cccc
Q psy8152          57 ELLIAY----SGQKIKIYDTD--FKNFNTNT-DVSFGEGDIVGVSRYDECILTAVK---SGDVKLWRYKTEPDQ--WTNF  124 (444)
Q Consensus        57 ~l~~~~----~d~~i~vw~~~--~~~~~~~~-~~~~~~~~v~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~--~~~~  124 (444)
                      .|++|+    .++.|++|.+.  +++..... ..........+++|+++ |++++.   ++.|++|++.++...  ....
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~   82 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV   82 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence            445553    24567777664  45543321 11222344477899999 555544   689999999776532  2334


Q ss_pred             ccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCC-ce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         125 NVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNT-TK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       125 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      .+...+..++|+|++++|++++ .++.|.+|++.. +.  .+..+.....       .|.  .......+.+++|+|+++
T Consensus        83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-------~p~--~~~~~~~~~~~~~spdg~  153 (347)
T 3hfq_A           83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-------GPR--PEQDGSHIHYTDLTPDNR  153 (347)
T ss_dssp             EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-------CSS--TTCSSCCEEEEEECTTSC
T ss_pred             cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-------CCC--ccccCCCceEEEECCCCc
Confidence            4677889999999999888887 689999999963 22  2222211110       000  001122488999999999


Q ss_pred             EEEEEeCCceEEEEEcCCCCCccceEEEeCC-CCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-Ccc--eeEecccc
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-DVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-GKP--CYKYKGFA  275 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-~~~--~~~~~~h~  275 (444)
                      ++++...++.|++|++...+....+..+..+ ...+..++|+|+|++|++ +..++.|++|++... ++.  +..+....
T Consensus       154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~  233 (347)
T 3hfq_A          154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIP  233 (347)
T ss_dssp             EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSC
T ss_pred             EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecC
Confidence            7777777899999999821222222333332 335778999999996665 667889999998741 332  22333222


Q ss_pred             ------CceeEEEecCCCCEE-EEEECCCcEEEEEcCC-C--ceEEEee-cCCceeEEEEcCCCcccccchhhhhccccc
Q psy8152         276 ------GCVKDIACPLNENLI-LSVSLDRHFRVHDFHS-K--KLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEE  344 (444)
Q Consensus       276 ------~~i~~~~~s~~~~~l-~s~~~dg~i~vw~~~~-~--~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~  344 (444)
                            ..+..++|+|+|++| ++...++.|.+|++.. +  +.+..+. +...+..++|+++         ++++++++
T Consensus       234 ~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd---------g~~l~v~~  304 (347)
T 3hfq_A          234 ADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT---------EAFVVVVN  304 (347)
T ss_dssp             TTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT---------SSEEEEEE
T ss_pred             CCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC---------CCEEEEEE
Confidence                  358889999999977 4556689999999973 2  3333443 3456788888754         56565555


Q ss_pred             -cCCCcccc--CCCccccccc
Q psy8152         345 -KGDSDEKY--DPEHFEMNQV  362 (444)
Q Consensus       345 -~d~~i~~W--~~~~~~~~~~  362 (444)
                       .++.+.+|  +..++++..+
T Consensus       305 ~~~~~v~v~~~d~~tg~l~~~  325 (347)
T 3hfq_A          305 QNTDNATLYARDLTSGKLSLL  325 (347)
T ss_dssp             TTTTEEEEEEECTTTCCEEEE
T ss_pred             cCCCcEEEEEEeCCCCeEEec
Confidence             45899999  5555555443

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.90  E-value=4e-22  Score=182.35  Aligned_cols=280  Identities=9%  Similarity=0.071  Sum_probs=189.0

Q ss_pred             EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCcccccc
Q psy8152          47 ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNF  124 (444)
Q Consensus        47 ~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~  124 (444)
                      .++++ +++.++++++.++.|++||+.+++.+..+..... .....+++|++++++ ++..++.|.+|++.+++.+..+.
T Consensus         4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~   82 (349)
T 1jmx_B            4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   82 (349)
T ss_dssp             CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence            45677 6888999999999999999999988877764321 244567789998654 55568999999999887765333


Q ss_pred             cc------CCCeEEEEEeccCCEEEEeeCC------------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccC
Q psy8152         125 NV------GPQLECMKHNKHSNIIATGGKE------------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       125 ~~------~~~v~~~~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      ..      ...+.+++|+|++++|++++.+            +.|.+||+.+++....+.....                
T Consensus        83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------------  146 (349)
T 1jmx_B           83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM----------------  146 (349)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC----------------
T ss_pred             cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC----------------
Confidence            22      2237899999999999998865            8999999988543322111111                


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC------------------------CeeEEEEcc
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV------------------------ALSCITTTN  242 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~------------------------~i~~~~~~~  242 (444)
                      +..+.+++|+|+++ +++++.  .|++||+.   ..+.+..+..+..                        ....+++++
T Consensus       147 ~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (349)
T 1jmx_B          147 PRQVYLMRAADDGS-LYVAGP--DIYKMDVK---TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK  220 (349)
T ss_dssp             CSSCCCEEECTTSC-EEEESS--SEEEECTT---TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred             CCcccceeECCCCc-EEEccC--cEEEEeCC---CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence            11488899999999 555544  49999998   5555555543320                        233456665


Q ss_pred             CCCEEEEEcCCC-cEEEEEcCCCCcc-eeEeccccCceeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152         243 QSHYVIVGSTTG-DMMAVDLRGKGKP-CYKYKGFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       243 ~~~~l~~~~~dg-~i~iwd~~~~~~~-~~~~~~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i  319 (444)
                      ++.......... .+..+++.+ ++. +..+..+...+..++|+| ++++|+++  ++.|++||+.+++.+..+.....+
T Consensus       221 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~  297 (349)
T 1jmx_B          221 DDKQDPATADLLYGYLSVDLKT-GKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTY  297 (349)
T ss_dssp             ------CCCEEEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred             CCcCCccccccceeEEEEeccC-CcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCc
Confidence            432111000001 112244443 221 111223456788999999 99999888  889999999999998888777778


Q ss_pred             eEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         320 TSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      .+++|+++         ++++++++.++.|++|+....+...
T Consensus       298 ~~~~~s~d---------g~~l~~~~~~~~v~v~d~~~~~~~~  330 (349)
T 1jmx_B          298 YCVAFDKK---------GDKLYLGGTFNDLAVFNPDTLEKVK  330 (349)
T ss_dssp             CEEEECSS---------SSCEEEESBSSEEEEEETTTTEEEE
T ss_pred             cceEECCC---------CCEEEEecCCCeEEEEeccccceee
Confidence            88888755         4566667788999999998766443

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.90  E-value=1.9e-21  Score=179.15  Aligned_cols=278  Identities=12%  Similarity=0.080  Sum_probs=187.1

Q ss_pred             ccEEEecCC--CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC-CCccccceee
Q psy8152           7 YNIYIGSST--GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-FKNFNTNTDV   83 (444)
Q Consensus         7 ~~l~~g~~d--g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-~~~~~~~~~~   83 (444)
                      ..|++|+..  +.|++|.+.........+.... ..+...+..++|+ |++++|++++.+ .|.+|++. +++.......
T Consensus         3 ~~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~-~~~~~~~~~~a~s-pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~   79 (365)
T 1jof_A            3 HHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTE-IPQDEPISWMTFD-HERKNIYGAAMK-KWSSFAVKSPTEIVHEASH   79 (365)
T ss_dssp             EEEEEEESSSSCEEEEEEEETTTTEEEEEEEEE-CCTTCCCSEEEEC-TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEEccCCCcEEEEEEECCCCCEEEeeEEc-cCCCCCCcEEEEC-CCCCEEEEEccc-eEEEEEECCCCCEEEeeEe
Confidence            467788764  5688887743221122222111 1234578899999 799999999887 99999997 6766543332


Q ss_pred             cc-ccccEEEEEeCCCe--EEEEe-------------cCCcEEEEEcC-CCCcccccc----ccCCCeEEEEEeccCCEE
Q psy8152          84 SF-GEGDIVGVSRYDEC--ILTAV-------------KSGDVKLWRYK-TEPDQWTNF----NVGPQLECMKHNKHSNII  142 (444)
Q Consensus        84 ~~-~~~~v~~~s~~~~~--l~~~~-------------~dg~i~iw~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l  142 (444)
                      .. ......+++|+|++  ++++.             .++.+.+|++. .++......    .+...+.+++|+|+|++|
T Consensus        80 ~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l  159 (365)
T 1jof_A           80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL  159 (365)
T ss_dssp             ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred             ecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE
Confidence            11 11222456889984  44543             68899999997 455432222    245679999999999988


Q ss_pred             EEeeC-CCeEEEEEcC-Cceee--eeeec--ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEE
Q psy8152         143 ATGGK-ENDLKLWDLN-TTKNI--FSAKN--VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYD  215 (444)
Q Consensus       143 ~~~~~-d~~i~vwd~~-~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d  215 (444)
                      +++.. ++.|++|++. +++..  ..+..  +..                  .+..++|+|+|++|++++. ++.|.+|+
T Consensus       160 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~------------------~p~~~~~spdg~~l~v~~~~~~~v~v~~  221 (365)
T 1jof_A          160 YSADLTANKLWTHRKLASGEVELVGSVDAPDPGD------------------HPRWVAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC------------------CEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC------------------CCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence            87654 6799999998 66543  22221  122                  4889999999998887764 78999998


Q ss_pred             cCCCCCccce---EEEe---C----CCC------CeeEEE-EccCCCEEEEEcCCC------cEEEEEcC-CCCccee--
Q psy8152         216 PKITTQRRPV---LKVD---I----PDV------ALSCIT-TTNQSHYVIVGSTTG------DMMAVDLR-GKGKPCY--  269 (444)
Q Consensus       216 ~~~~~~~~~~---~~~~---~----~~~------~i~~~~-~~~~~~~l~~~~~dg------~i~iwd~~-~~~~~~~--  269 (444)
                      +. ...++..   ..+.   .    +..      .+..++ |+|+|++|+++....      .|.+|++. + ++...  
T Consensus       222 ~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~-g~~~~~~  299 (365)
T 1jof_A          222 ID-PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC-GSIEKQL  299 (365)
T ss_dssp             EC-TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT-SCEEEEE
T ss_pred             Ee-CCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC-CCEEEee
Confidence            76 1122221   1222   1    121      478899 999999988765432      79999996 4 55443  


Q ss_pred             -EeccccCceeEEEecC---CCCEEEEEECC-CcEEEEEcCCC
Q psy8152         270 -KYKGFAGCVKDIACPL---NENLILSVSLD-RHFRVHDFHSK  307 (444)
Q Consensus       270 -~~~~h~~~i~~~~~s~---~~~~l~s~~~d-g~i~vw~~~~~  307 (444)
                       .+..+...+..++|+|   ++++|++++.+ +.|.+|++...
T Consensus       300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          300 FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence             2333455567889999   89999998864 89999999766

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.90  E-value=7.3e-22  Score=198.61  Aligned_cols=314  Identities=5%  Similarity=-0.051  Sum_probs=205.9

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCccc---ceEEEeeeccCCcEEEEEEc---------CCeEEEEeCCCC
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA---SVLALNWGNVEESELLIAYS---------GQKIKIYDTDFK   75 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~---------d~~i~vw~~~~~   75 (444)
                      .++..+.++.|++|++.+++.  .  ..+.  .|..   .|.+++|| |++++|++++.         ++.|++|++.++
T Consensus        28 ~~~~~~~d~~i~~~~~~~g~~--~--~~~~--~~~~~~~~~~~~~~S-pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g  100 (719)
T 1z68_A           28 EYLHQSADNNIVLYNIETGQS--Y--TILS--NRTMKSVNASNYGLS-PDRQFVYLESDYSKLWRYSYTATYYIYDLSNG  100 (719)
T ss_dssp             EEEEECTTSCEEEEESSSCCE--E--EEEC--HHHHHTTTCSEEEEC-TTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred             eEEEEcCCCCEEEEEcCCCcE--E--EEEc--cccccccceeeEEEC-CCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence            455555699999999998873  1  1111  2222   38999999 79999998876         789999999988


Q ss_pred             ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc-cccCCCe-----------------EEEEEec
Q psy8152          76 NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN-FNVGPQL-----------------ECMKHNK  137 (444)
Q Consensus        76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~  137 (444)
                      +.+....+ .......+++|+|+.|+++. ++.|++|++.+++..... .++...|                 .+++|+|
T Consensus       101 ~~~~~~~l-~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP  178 (719)
T 1z68_A          101 EFVRGNEL-PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP  178 (719)
T ss_dssp             EECCSSCC-CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred             ccccceec-CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence            87321221 12344578899999999885 789999999888765422 2232222                 4899999


Q ss_pred             cCCEEEEeeCCC----------------------------------eEEEEEcCCceee--eee------ecccceeeEe
Q psy8152         138 HSNIIATGGKEN----------------------------------DLKLWDLNTTKNI--FSA------KNVSHRVLVY  175 (444)
Q Consensus       138 ~~~~l~~~~~d~----------------------------------~i~vwd~~~~~~~--~~~------~~~~~~~~~~  175 (444)
                      +|++|++++.+.                                  .|++||+.+++..  ..+      ..+.      
T Consensus       179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~------  252 (719)
T 1z68_A          179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD------  252 (719)
T ss_dssp             TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC------
T ss_pred             CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc------
Confidence            999999988652                                  6788888876542  111      1222      


Q ss_pred             eeCCCcccccCccceeEEEEecCCCEEEEEeCC----ceEEEEE----cCCCCCccceEEE----eCCCCCee-----EE
Q psy8152         176 SVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ----GYVRVYD----PKITTQRRPVLKV----DIPDVALS-----CI  238 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~~~~----~~~~~~i~-----~~  238 (444)
                                  ..+.+++|+|+++++++....    ..|.+||    +.   .+.....+    ..+...+.     .+
T Consensus       253 ------------~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~  317 (719)
T 1z68_A          253 ------------YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ---TWDCPKTQEHIEESRTGWAGGFFVSTP  317 (719)
T ss_dssp             ------------EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS---SEECCGGGEEEEECSSSCSSSSSCCCC
T ss_pred             ------------ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC---CCceEEEEecccccCCceEccccCCcc
Confidence                        268999999998776664322    3588999    76   33333222    35666666     88


Q ss_pred             EEccCCCEEEE--EcCCC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCC--C
Q psy8152         239 TTTNQSHYVIV--GSTTG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHS--K  307 (444)
Q Consensus       239 ~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~--~  307 (444)
                      .|+|+|+.|+.  +..+|  .|++|++.. ++ ...+..+...+..+.++ +++.|+..+.+     +.+++|.+..  +
T Consensus       318 ~~spdg~~l~~~~~~~~g~~~l~~~~~~~-~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g  394 (719)
T 1z68_A          318 VFSYDAISYYKIFSDKDGYKHIHYIKDTV-EN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY  394 (719)
T ss_dssp             EECTTSSCEEEEEECTTSCEEEEEESSCS-TT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred             EECCCCCeEEEEEEccCCceEEEEEECCC-Cc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence            99999986554  44555  567777766 54 55666666678888777 78777766655     7888998754  3


Q ss_pred             ce-EEEee-----cCCceeEEEEcCCCcccccchhhhhcc-ccccC--CCccccCCCcccccccc
Q psy8152         308 KL-LRKDY-----MQSRLTSILVRSDFSLENETKKEEQEH-SEEKG--DSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       308 ~~-~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d--~~i~~W~~~~~~~~~~~  363 (444)
                      .. ...+.     +...+..+.|+++         +++++ +.+..  ..+.+|++..++..++.
T Consensus       395 ~~~~~~l~~~~~~~~~~~~~~~~s~d---------g~~l~~~~s~~~~p~~~l~d~~~g~~~~~~  450 (719)
T 1z68_A          395 PPSKKCVTCHLRKERCQYYTASFSDY---------AKYYALVCYGPGIPISTLHDGRTDQEIKIL  450 (719)
T ss_dssp             SCCEEESSTTTTTTTBCBEEEEECGG---------GSSEEEEECCBSSCEEEEECSSSCCEEEEE
T ss_pred             CCCceeccCccCCCCCceEEEEECCC---------CCEEEEEcCCCCCCeEEEEECCCCCEEEEe
Confidence            21 22222     2345666777643         33333 22222  45778887666544333

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.90  E-value=2.7e-22  Score=188.37  Aligned_cols=212  Identities=14%  Similarity=0.106  Sum_probs=160.4

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc----------c-----ccccccCCC
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD----------Q-----WTNFNVGPQ  129 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~----------~-----~~~~~~~~~  129 (444)
                      +.+++|+... .    +  +......+++++.+.++++++.++ +++|+......          .     .....+...
T Consensus        23 ~~vri~~~~~-~----~--~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (434)
T 2oit_A           23 KKVRIFDSPE-E----L--PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP   94 (434)
T ss_dssp             CEEECSCCCS-S----C--CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred             eeEEecCCcc-c----c--CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence            5688886431 1    1  233566788899999999998887 89987532100          0     012335677


Q ss_pred             eEEEEEeccCCEEE----EeeCCCeEEEEEcCCc--------ee---eeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         130 LECMKHNKHSNIIA----TGGKENDLKLWDLNTT--------KN---IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       130 v~~~~~~~~~~~l~----~~~~d~~i~vwd~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      |.+++|+|++++|+    +|+.|+.|++||+.++        ++   +..+.+|..                  .|++++
T Consensus        95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~------------------~V~~v~  156 (434)
T 2oit_A           95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG------------------MVIDMK  156 (434)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG------------------SEEEEE
T ss_pred             ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCC------------------ceEEEE
Confidence            99999999999999    7889999999999764        22   233333444                  799999


Q ss_pred             EecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc
Q psy8152         195 FLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       195 ~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  273 (444)
                      |+|+ +.+|++++.||+|++||++   ....+.....|...|++++|+|+|++|++|+.||.|++||++  ++....+..
T Consensus       157 ~~p~~~~~las~s~Dg~v~iwD~~---~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~--~~~~~~~~~  231 (434)
T 2oit_A          157 WNPTVPSMVAVCLADGSIAVLQVT---ETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT--LQEKKVIPC  231 (434)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEEES---SSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT--CCEEEEECC
T ss_pred             ECCCCCCEEEEEECCCeEEEEEcC---CCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC--CcccccccC
Confidence            9998 6999999999999999999   556666667788899999999999999999999999999987  344444443


Q ss_pred             c-------cCceeEEEecCCCCEEEEE-ECCC------cEEEEEcCCC
Q psy8152         274 F-------AGCVKDIACPLNENLILSV-SLDR------HFRVHDFHSK  307 (444)
Q Consensus       274 h-------~~~i~~~~~s~~~~~l~s~-~~dg------~i~vw~~~~~  307 (444)
                      |       ...|.+++|++++.++++. +.+|      .+++|++...
T Consensus       232 ~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          232 PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             CTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             CcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            3       3389999999988777553 3443      3899999864

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.89  E-value=1.1e-21  Score=192.33  Aligned_cols=259  Identities=12%  Similarity=0.061  Sum_probs=188.2

Q ss_pred             CCcccEEEecC-CCcEEEEEcCCCccceeeeeeecccCcc-cceEEEeeeccCCcEEEEEEc---CCeEEEEeCCC---C
Q psy8152           4 ADDYNIYIGSS-TGAFKGVNLSKDKCIIKNIQNVKYITNK-ASVLALNWGNVEESELLIAYS---GQKIKIYDTDF---K   75 (444)
Q Consensus         4 ~~~~~l~~g~~-dg~i~i~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~---d~~i~vw~~~~---~   75 (444)
                      .+++.|+.++. +|.++||.+..+..     ..+.  .|. ..|..++|+ |+ +.+++++.   +...+||.+..   +
T Consensus        31 ~DG~~la~~s~~~g~~~lw~~~~g~~-----~~lt--~~~~~~~~~~~~s-pd-~~l~~~~~~~g~~~~~l~~~~~~~~g  101 (582)
T 3o4h_A           31 VDGDKLLVVGFSEGSVNAYLYDGGET-----VKLN--REPINSVLDPHYG-VG-RVILVRDVSKGAEQHALFKVNTSRPG  101 (582)
T ss_dssp             ETTTEEEEEEEETTEEEEEEEETTEE-----EECC--SSCCSEECEECTT-CS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred             CCCCeEEEEEccCCceeEEEEcCCCc-----Eeee--cccccccccccCC-CC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence            46677887776 99999999866552     2222  344 689999999 67 77777765   45556655432   2


Q ss_pred             ccccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC----Ce
Q psy8152          76 NFNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE----ND  150 (444)
Q Consensus        76 ~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~  150 (444)
                      .......  .+...+.+++|+++. +++.+.++.+.+|++.+++... +..+..  .+++|+|+|++|++++.+    +.
T Consensus       102 ~~~~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~  176 (582)
T 3o4h_A          102 EEQRLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVS  176 (582)
T ss_dssp             CCEECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred             ccccccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeE
Confidence            2222211  223346788999864 3444455566699999887664 444443  899999999999988877    78


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc--eEEEEEcCCCCCccceEEE
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG--YVRVYDPKITTQRRPVLKV  228 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~  228 (444)
                      |++||+.+++.. .+..+..                  .+..++|+|+|++|+++..++  .|++||+.   ..... .+
T Consensus       177 i~~~d~~~g~~~-~l~~~~~------------------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~---~~~~~-~~  233 (582)
T 3o4h_A          177 LFTSNLSSGGLR-VFDSGEG------------------SFSSASISPGMKVTAGLETAREARLVTVDPR---DGSVE-DL  233 (582)
T ss_dssp             EEEEETTTCCCE-EECCSSC------------------EEEEEEECTTSCEEEEEECSSCEEEEEECTT---TCCEE-EC
T ss_pred             EEEEcCCCCCce-EeecCCC------------------ccccceECCCCCEEEEccCCCeeEEEEEcCC---CCcEE-Ec
Confidence            999999887754 4444444                  689999999999999888888  89999998   44444 56


Q ss_pred             eCCCCCeeEEE--------EccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCc--
Q psy8152         229 DIPDVALSCIT--------TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH--  298 (444)
Q Consensus       229 ~~~~~~i~~~~--------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~--  298 (444)
                      ..+...+..++        |+|+|.++++++.++.++||++   ++.+.   .+.+.|.+++|+ +++++++++.+.+  
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~---g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~  306 (582)
T 3o4h_A          234 ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID---GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPP  306 (582)
T ss_dssp             CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET---TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred             cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE---CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCC
Confidence            66777777777        9999988999999999999998   34443   234678899999 8998888887754  


Q ss_pred             -EEEEEcCC
Q psy8152         299 -FRVHDFHS  306 (444)
Q Consensus       299 -i~vw~~~~  306 (444)
                       |++|+..+
T Consensus       307 ~l~~~d~~~  315 (582)
T 3o4h_A          307 RIVSLPSGE  315 (582)
T ss_dssp             EEEEETTCC
T ss_pred             eEEEEcCCC
Confidence             67777653

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.89  E-value=3.2e-20  Score=170.17  Aligned_cols=297  Identities=11%  Similarity=0.051  Sum_probs=207.3

Q ss_pred             CCCcccEEEec------CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----------CCe
Q psy8152           3 LADDYNIYIGS------STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----------GQK   66 (444)
Q Consensus         3 ~~~~~~l~~g~------~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----------d~~   66 (444)
                      +.++.++++..      .++.|++||..+++. .   ..+.  .+..+  .++|+ |++++|+++..          ++.
T Consensus        12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~-~---~~i~--~g~~p--~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~   82 (361)
T 2oiz_A           12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKF-L---GMVP--TAFNG--HVQVS-NDGKKIYTMTTYHERITRGKRSDV   82 (361)
T ss_dssp             SCGGGEEEEEECCGGGGGGCEEEEEETTTCCE-E---EEEE--CCEEE--EEEEC-TTSSEEEEEEEEETTSSSSCEEEE
T ss_pred             CCCCCEEEEECCCCCccccCeEEEEECCCCeE-E---EEec--CCCCC--ceEEC-CCCCEEEEEEecccccccCCCCCE
Confidence            44556677654      477999999888774 1   2222  33444  89999 79999998863          578


Q ss_pred             EEEEeCCCCccccceeecc------ccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEecc
Q psy8152          67 IKIYDTDFKNFNTNTDVSF------GEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH  138 (444)
Q Consensus        67 i~vw~~~~~~~~~~~~~~~------~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  138 (444)
                      |.+||+.+++.+..+....      ....-.+++|+|++|+++..  ++.|.+||+.+++.+..+..+.. ...+.+.|.
T Consensus        83 v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~  161 (361)
T 2oiz_A           83 VEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPN  161 (361)
T ss_dssp             EEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTT
T ss_pred             EEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCC
Confidence            9999999888887776431      12344778999999998874  57899999999877653144333 233567774


Q ss_pred             C-CEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEc
Q psy8152         139 S-NIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       139 ~-~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  216 (444)
                      + ..+++.+.||.+.+|++.. ++.......  .    ..+.+..       ....+.++|++..++..+.++.|.++|+
T Consensus       162 ~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~--~----~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~v~v~d~  228 (361)
T 2oiz_A          162 RPRSFMTICGDGGLLTINLGEDGKVASQSRS--K----QMFSVKD-------DPIFIAPALDKDKAHFVSYYGNVYSADF  228 (361)
T ss_dssp             SSSEEEEEETTSSEEEEEECTTSSEEEEEEC--C----CCSCTTT-------SCBCSCCEECSSEEEEEBTTSEEEEEEC
T ss_pred             CCeeEEEECCCCcEEEEEECCCCcEeeeccc--c----ceEcCCC-------CceEEEecccCCEEEEEeCCCeEEEEEe
Confidence            4 6788888999999999865 544322110  0    0011100       1123344677877777788999999998


Q ss_pred             CCCCCccceEEEeCCC----------CCeeEEEEccCCCEEEEEcC-----------CCcEEEEEcCCCCcceeEecccc
Q psy8152         217 KITTQRRPVLKVDIPD----------VALSCITTTNQSHYVIVGST-----------TGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      . ......+..+....          .....++|+|+++.++++..           .+.|.+||+.+ ++.+.++..+.
T Consensus       229 ~-~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~  306 (361)
T 2oiz_A          229 S-GDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD  306 (361)
T ss_dssp             S-SSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT
T ss_pred             c-CCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC
Confidence            7 22222222222110          11223789999888877543           34799999999 99999999776


Q ss_pred             CceeEEEecCCCCEEEEEECCCcEEEEEcCCC--ceEEEe-ecCCceeEEEEcCC
Q psy8152         276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSK--KLLRKD-YMQSRLTSILVRSD  327 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~--~~~~~~-~~~~~i~~~~~~~~  327 (444)
                        +.+++|+|+|++|++++. +.|.+||..++  +++.++ .+......+++.++
T Consensus       307 --p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~  358 (361)
T 2oiz_A          307 --ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV  358 (361)
T ss_dssp             --CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred             --eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence              899999999999998887 99999999999  998886 46677788888765

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.89  E-value=4e-20  Score=170.05  Aligned_cols=288  Identities=7%  Similarity=0.065  Sum_probs=184.3

Q ss_pred             CCcEEEEEEc----CCeEEEEeC--CCCccccceeeccccccEEEEEeCCCeEEEEecC----CcEEEEEcCC--CCccc
Q psy8152          54 EESELLIAYS----GQKIKIYDT--DFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS----GDVKLWRYKT--EPDQW  121 (444)
Q Consensus        54 ~~~~l~~~~~----d~~i~vw~~--~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d----g~i~iw~~~~--~~~~~  121 (444)
                      ...++++|+.    ++.|++|.+  .+++.......+.......+++|++++|++++.+    +.|.+|++..  ++...
T Consensus        12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~   91 (361)
T 3scy_A           12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL   91 (361)
T ss_dssp             GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred             CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence            3456666643    568999976  4555544333223344457889999999998875    7999999875  33321


Q ss_pred             --cccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeeeeeec---ccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         122 --TNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIFSAKN---VSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       122 --~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                        ....+......+++  ++++|++++ .++.|.+|++.....+..+..   +..      ..|. ........+.+++|
T Consensus        92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g------~~~~-~~~~~~~~~~~~~~  162 (361)
T 3scy_A           92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKG------SGPD-KERQTMPHLHCVRI  162 (361)
T ss_dssp             EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCC------CCSC-TTTCSSCCEEEEEE
T ss_pred             eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccC------CCCC-ccccCCCcceEEEE
Confidence              22224556777777  777777766 578999999976433221110   000      0000 00111224688999


Q ss_pred             ecCCCEEEEE-eCCceEEEEEcCCCCCc----c-c------eEEEeCCCCCeeEEEEccCCCEEEEEc-CCCcEEEEEcC
Q psy8152         196 LPNSDKVAVC-SKQGYVRVYDPKITTQR----R-P------VLKVDIPDVALSCITTTNQSHYVIVGS-TTGDMMAVDLR  262 (444)
Q Consensus       196 ~~~~~~l~~~-~~d~~i~i~d~~~~~~~----~-~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~  262 (444)
                      +|++++|+++ ..++.|++|++. ....    + .      ..........+..++|+|+|++|++++ .++.|.+|++.
T Consensus       163 spdg~~l~~~~~~~~~v~v~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~  241 (361)
T 3scy_A          163 TPDGKYLLADDLGTDQIHKFNIN-PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA  241 (361)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEEC-TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred             CCCCCEEEEEeCCCCEEEEEEEc-CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence            9999866555 458899999988 2221    1 1      111223445578999999999887766 68999999998


Q ss_pred             CCCcc--eeEec---cccCceeEEEecCCCCEEEEEECC--CcEEEEEcC--CCc--eEEEeecCCceeEEEEcCCCccc
Q psy8152         263 GKGKP--CYKYK---GFAGCVKDIACPLNENLILSVSLD--RHFRVHDFH--SKK--LLRKDYMQSRLTSILVRSDFSLE  331 (444)
Q Consensus       263 ~~~~~--~~~~~---~h~~~i~~~~~s~~~~~l~s~~~d--g~i~vw~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~  331 (444)
                      + +..  +..+.   .+...+..++|+|+|++|+++..+  +.|.+|++.  +++  .+..+.....+..++|+++    
T Consensus       242 ~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd----  316 (361)
T 3scy_A          242 D-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN----  316 (361)
T ss_dssp             T-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT----
T ss_pred             C-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC----
Confidence            7 644  23332   334456899999999988776654  899999996  455  3333334456788888754    


Q ss_pred             ccchhhhhccccc-cCCCccccCC--Ccccccc
Q psy8152         332 NETKKEEQEHSEE-KGDSDEKYDP--EHFEMNQ  361 (444)
Q Consensus       332 ~~~~~~~~~~s~~-~d~~i~~W~~--~~~~~~~  361 (444)
                           +++++.++ .++.+.+|.+  .++++..
T Consensus       317 -----g~~l~~~~~~~~~v~v~~~d~~~g~~~~  344 (361)
T 3scy_A          317 -----GKYLLVACRDTNVIQIFERDQATGLLTD  344 (361)
T ss_dssp             -----SCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred             -----CCEEEEEECCCCCEEEEEEECCCCcEee
Confidence                 56566555 6789999644  4555443

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.88  E-value=1.6e-21  Score=183.22  Aligned_cols=198  Identities=15%  Similarity=0.116  Sum_probs=147.9

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--------ccce-----eeccccccEEE--EEeCCCeEE----E
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--------NTNT-----DVSFGEGDIVG--VSRYDECIL----T  102 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--------~~~~-----~~~~~~~~v~~--~s~~~~~l~----~  102 (444)
                      ...+..++++ +.+.+|++++.++ ++||+......        ....     ....+...|.+  ++|++++|+    +
T Consensus        36 ~~~~n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s  113 (434)
T 2oit_A           36 KERSSLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS  113 (434)
T ss_dssp             CSCCBCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred             CCCccEEEEe-cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence            4468899999 7899999999887 89987532110        0000     00122344554  578899999    7


Q ss_pred             EecCCcEEEEEcCCC--------Cc---cccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccc
Q psy8152         103 AVKSGDVKLWRYKTE--------PD---QWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSH  170 (444)
Q Consensus       103 ~~~dg~i~iw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~  170 (444)
                      ++.|+.|+|||+.++        +.   ...+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+.....|..
T Consensus       114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~  193 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV  193 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred             cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence            888999999998754        11   2345568999999999996 89999999999999999999876666555555


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-------CCCeeEEEEccC
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-------DVALSCITTTNQ  243 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~  243 (444)
                                        .|++++|+|++++|++|+.||+|++||++    ......+..+       ...|.+++|+++
T Consensus       194 ------------------~v~~v~wspdg~~lasgs~dg~v~iwd~~----~~~~~~~~~~~~~~~~~~~~v~~v~w~~~  251 (434)
T 2oit_A          194 ------------------AVTSVCWSPKGKQLAVGKQNGTVVQYLPT----LQEKKVIPCPPFYESDHPVRVLDVLWIGT  251 (434)
T ss_dssp             ------------------CEEEEEECTTSSCEEEEETTSCEEEECTT----CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred             ------------------ceeEEEEcCCCCEEEEEcCCCcEEEEccC----CcccccccCCcccCCCCceeEEEEEEecC
Confidence                              79999999999999999999999999988    2333334333       237899999998


Q ss_pred             CCEEEE-EcCCC------cEEEEEcCC
Q psy8152         244 SHYVIV-GSTTG------DMMAVDLRG  263 (444)
Q Consensus       244 ~~~l~~-~~~dg------~i~iwd~~~  263 (444)
                      +.++++ +..+|      .+++|++++
T Consensus       252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~  278 (434)
T 2oit_A          252 YVFAIVYAAADGTLETSPDVVMALLPK  278 (434)
T ss_dssp             TEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred             ceEEEEEccCCCccCCCCceEEEEecc
Confidence            887765 33343      389999986

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.88  E-value=4.8e-22  Score=199.89  Aligned_cols=292  Identities=10%  Similarity=0.001  Sum_probs=190.9

Q ss_pred             EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc---cccEEEEEeCCCeEEEEec---------CCcEEEEE
Q psy8152          46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG---EGDIVGVSRYDECILTAVK---------SGDVKLWR  113 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~~~v~~~s~~~~~l~~~~~---------dg~i~iw~  113 (444)
                      ..++|+ |++.+++ .+.|+.|++|++.+++....+..+..   .....+++|+|++|++++.         ++.|++|+
T Consensus        19 ~~~~~s-~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           19 FFPNWI-SGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCCEES-SSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CccEEC-CCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            478999 7886554 44689999999999987766542211   1455778999999998876         68999999


Q ss_pred             cCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc-ccCccceeE
Q psy8152         114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD-LRRPVWVNG  192 (444)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  192 (444)
                      +.+++.+. .......+..++|+|+|+.|+++. ++.|++|++.+++.......... ..++.-.++... ........+
T Consensus        97 ~~~g~~~~-~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~-~~v~~g~~~~v~~ee~~~~~~~  173 (719)
T 1z68_A           97 LSNGEFVR-GNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE-NKIFNGIPDWVYEEEMLATKYA  173 (719)
T ss_dssp             TTTTEECC-SSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBT-TTEEESSCCHHHHHHTTCSSCC
T ss_pred             CCCCcccc-ceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc-CCeEcccccceeeeecccCccc
Confidence            99887731 111235688999999999999986 78999999988776432211111 000000000000 000001258


Q ss_pred             EEEecCCCEEEEEeCCc----------------------------------eEEEEEcCCCCCccce--E------EEeC
Q psy8152         193 ISFLPNSDKVAVCSKQG----------------------------------YVRVYDPKITTQRRPV--L------KVDI  230 (444)
Q Consensus       193 ~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~--~------~~~~  230 (444)
                      ++|+|+|++|++++.|.                                  .|++||+.   .....  .      .+..
T Consensus       174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~~  250 (719)
T 1z68_A          174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT---YPAYVGPQEVPVPAMIAS  250 (719)
T ss_dssp             EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS---CHHHHCCEECCCCHHHHT
T ss_pred             EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC---CCCccceeEccCCccCCC
Confidence            99999999999887552                                  78899998   44332  1      1235


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCC----CcEEEEE----cCCCCcceeEe----ccccCcee-----EEEecCCCCEEEE-
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTT----GDMMAVD----LRGKGKPCYKY----KGFAGCVK-----DIACPLNENLILS-  292 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~~----~~h~~~i~-----~~~~s~~~~~l~s-  292 (444)
                      |...+..++|+|+++++++....    ..|++||    +.+ +++...+    .+|...+.     .++|+|+|+.|+. 
T Consensus       251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~  329 (719)
T 1z68_A          251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI  329 (719)
T ss_dssp             SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred             CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence            77788999999998877764332    2488899    777 6666555    46777676     7899999986554 


Q ss_pred             -EECCC--cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcccccc----CCCccccCCC
Q psy8152         293 -VSLDR--HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEK----GDSDEKYDPE  355 (444)
Q Consensus       293 -~~~dg--~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~----d~~i~~W~~~  355 (444)
                       +..+|  .|++|++.+++......+...+..+.+. +-        +..++++..    ++..++|.+.
T Consensus       330 ~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~--------~~i~~~~~~~~~~~~~~~l~~~~  390 (719)
T 1z68_A          330 FSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQ--------DSLFYSSNEFEEYPGRRNIYRIS  390 (719)
T ss_dssp             EECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CS--------SEEEEEESCGGGCTTCBEEEEEE
T ss_pred             EEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eC--------CEEEEEEecCCCCCceEEEEEEe
Confidence             44555  5777788777643222234446665554 31        133334433    5788999765

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.87  E-value=4.9e-20  Score=171.16  Aligned_cols=274  Identities=11%  Similarity=0.004  Sum_probs=182.6

Q ss_pred             EeeeccCCcEEEEEEc-CC--eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc
Q psy8152          48 LNWGNVEESELLIAYS-GQ--KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF  124 (444)
Q Consensus        48 ~~~~~~~~~~l~~~~~-d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  124 (444)
                      .+|+ |++++|+.++. ++  .|.+|++.+++.......+........++|+++.|+.++.++.|++|++.+++......
T Consensus        41 ~~~S-pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~  119 (388)
T 3pe7_A           41 KCFT-RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ  119 (388)
T ss_dssp             CCBC-TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             ccCC-CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence            7899 79999998887 66  48888998888776654222122134789999999999999999999999988765444


Q ss_pred             ccCCCeEEEE--EeccCCEEEEe----------------------eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152         125 NVGPQLECMK--HNKHSNIIATG----------------------GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD  180 (444)
Q Consensus       125 ~~~~~v~~~~--~~~~~~~l~~~----------------------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (444)
                      .+...+....  ++|++.+++..                      ..+..|.+||+.+++..... .+..          
T Consensus       120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~----------  188 (388)
T 3pe7_A          120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQ----------  188 (388)
T ss_dssp             CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESS----------
T ss_pred             chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCc----------
Confidence            4555454444  47888888742                      24578999999987654333 2333          


Q ss_pred             cccccCccceeEEEEec-CCCEEEEEeCC------ceEEEEEcCCCCCccceEEEeCCC--CCeeEEEEccCCCEEEEEc
Q psy8152         181 EFDLRRPVWVNGISFLP-NSDKVAVCSKQ------GYVRVYDPKITTQRRPVLKVDIPD--VALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       181 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~  251 (444)
                              .+..++|+| +++.|+.+...      ..|.++++.   .. ....+..+.  ..+..++|+|+|+.|+..+
T Consensus       189 --------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~-~~~~l~~~~~~~~~~~~~~spdg~~l~~~~  256 (388)
T 3pe7_A          189 --------WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED---GT-NMRKVKTHAEGESCTHEFWVPDGSALVYVS  256 (388)
T ss_dssp             --------CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT---SC-CCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred             --------cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC---CC-ceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence                    588999999 99888876653      378888876   22 233333333  2577889999999776533


Q ss_pred             C-CC----cEEEEEcCCCCcc--eeEeccccCc---eeEEEecCCCCEEEEE---------ECCCcEEEEEcCCCceEEE
Q psy8152         252 T-TG----DMMAVDLRGKGKP--CYKYKGFAGC---VKDIACPLNENLILSV---------SLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       252 ~-dg----~i~iwd~~~~~~~--~~~~~~h~~~---i~~~~~s~~~~~l~s~---------~~dg~i~vw~~~~~~~~~~  312 (444)
                      . ++    .|++||+.+ ++.  +..+.++...   ...++|+|+|+.|+..         ..+..|++|++.+++....
T Consensus       257 ~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l  335 (388)
T 3pe7_A          257 YLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRV  335 (388)
T ss_dssp             EETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEE
T ss_pred             cCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEe
Confidence            2 22    399999998 663  3333331111   1223799999877754         4566899999998876444


Q ss_pred             eecCC-----------ceeEEEEcCCCcccccchhhhhcc-ccccCCCccccCCC
Q psy8152         313 DYMQS-----------RLTSILVRSDFSLENETKKEEQEH-SEEKGDSDEKYDPE  355 (444)
Q Consensus       313 ~~~~~-----------~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~i~~W~~~  355 (444)
                      ..+..           .+.+++|+++         ++.++ ++..++...||.+.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~spD---------g~~l~~~s~~~g~~~l~~~~  381 (388)
T 3pe7_A          336 ARHDTSWKVFEGDRQVTHPHPSFTPD---------DKQILFTSDVHGKPALYLAT  381 (388)
T ss_dssp             EECCCCCCCBTTBSSTTCCCCEECTT---------SSEEEEEECTTSSCEEEEEE
T ss_pred             ccccCcccccccccccCCCCccCCCC---------CCEEEEEecCCCceeEEEEE
Confidence            44444           3566666644         55454 34456777777654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.86  E-value=1.4e-19  Score=166.69  Aligned_cols=278  Identities=9%  Similarity=-0.016  Sum_probs=178.6

Q ss_pred             EEEEEEcC--CeEEEEeC--CCCccccceeec-cc--cccEEEEEeCCCeEEEEecCCcEEEEEcC-CCCcccccccc--
Q psy8152          57 ELLIAYSG--QKIKIYDT--DFKNFNTNTDVS-FG--EGDIVGVSRYDECILTAVKSGDVKLWRYK-TEPDQWTNFNV--  126 (444)
Q Consensus        57 ~l~~~~~d--~~i~vw~~--~~~~~~~~~~~~-~~--~~~v~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~--  126 (444)
                      +|++|+..  +.|.+|++  .+++....-... .+  ...-.+++|++++|++++.+ .|.+|++. +++... ...+  
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~   81 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPI   81 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEEC
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeec
Confidence            45666653  56887765  455443221111 11  33456789999999988888 99999997 776543 2222  


Q ss_pred             CCCeEEEEEeccCCE--EEEee-------------CCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         127 GPQLECMKHNKHSNI--IATGG-------------KENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       127 ~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      .+.+.+++|+|++++  ++++.             .++.+.+|++.. ++....+.....              .....+
T Consensus        82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~--------------~~~~~~  147 (365)
T 1jof_A           82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY--------------QENTGI  147 (365)
T ss_dssp             CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC--------------CTTCCE
T ss_pred             CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe--------------CCCCcc
Confidence            134667899999984  55553             689999999974 554433321100              001258


Q ss_pred             eEEEEecCCCEEEEEe-CCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccCCCEEEEEcC-CCcEEEEEcC--CC
Q psy8152         191 NGISFLPNSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQSHYVIVGST-TGDMMAVDLR--GK  264 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~  264 (444)
                      .+++|+|+|++|+++. .++.|++|++..++....+..+.  .+...+..++|+|+|++|++++. ++.|.+|++.  + 
T Consensus       148 ~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-  226 (365)
T 1jof_A          148 HGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT-  226 (365)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT-
T ss_pred             eEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC-
Confidence            8999999999888765 46899999997111222233343  23566899999999999887664 7899999875  4 


Q ss_pred             Ccce---e---Eec----cccC------ceeEEE-ecCCCCEEEEEECCC------cEEEEEcC-CCceEEE---ee-cC
Q psy8152         265 GKPC---Y---KYK----GFAG------CVKDIA-CPLNENLILSVSLDR------HFRVHDFH-SKKLLRK---DY-MQ  316 (444)
Q Consensus       265 ~~~~---~---~~~----~h~~------~i~~~~-~s~~~~~l~s~~~dg------~i~vw~~~-~~~~~~~---~~-~~  316 (444)
                      ++..   .   .+.    +|..      .+..++ |+|+|++|++++...      .|.+|++. ++++...   .. +.
T Consensus       227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~  306 (365)
T 1jof_A          227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT  306 (365)
T ss_dssp             CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS
T ss_pred             CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC
Confidence            4432   1   222    1222      578999 999999888766432      89999996 5665432   22 33


Q ss_pred             CceeEEEEcCCCcccccchhhhhcccccc-CCCccccCCCcc
Q psy8152         317 SRLTSILVRSDFSLENETKKEEQEHSEEK-GDSDEKYDPEHF  357 (444)
Q Consensus       317 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~-d~~i~~W~~~~~  357 (444)
                      ..+..++|++..    .  +++++++++. ++.|++|++...
T Consensus       307 ~~~~~~a~sp~~----~--dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          307 SGGHSNAVSPCP----W--SDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CCTTCCCEEECT----T--CTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCcccceecCCC----c--CCCEEEEEEcCCCeEEEEEEchh
Confidence            345566665410    0  4577777765 589999988755

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.85  E-value=6.6e-20  Score=184.53  Aligned_cols=271  Identities=13%  Similarity=0.055  Sum_probs=181.0

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc---cccE--EEEEeCCCeEEEEecC---------C
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG---EGDI--VGVSRYDECILTAVKS---------G  107 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~~~v--~~~s~~~~~l~~~~~d---------g  107 (444)
                      .....+++|+ |++.+|+++  |+.|++|++.+++....+..+..   ....  .++||+|++|+.++.+         +
T Consensus        16 ~~~~~~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           16 RLKLYSLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCCCCEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             cccccccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            4456789999 789888886  89999999999987666542221   1223  6789999999998876         5


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc-ccC
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD-LRR  186 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  186 (444)
                      .+.+||+.+++... +..|...+..++|+|+|+.||.+. ++.|++|++.+++...... .......+.-.++... ...
T Consensus        93 ~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-~g~~~~~~~g~~~~v~~ee~  169 (740)
T 4a5s_A           93 SYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-TGKEDIIYNGITDWVYEEEV  169 (740)
T ss_dssp             EEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS-CCBTTTEEESBCCHHHHHHT
T ss_pred             EEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC-CCCccceecCcccccccchh
Confidence            67799999998764 667788899999999999999985 6899999998876443211 1110000000000000 000


Q ss_pred             ccceeEEEEecCCCEEEEEeCC------------------------------------ceEEEEEcCCCCC---cc--ce
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQ------------------------------------GYVRVYDPKITTQ---RR--PV  225 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d------------------------------------~~i~i~d~~~~~~---~~--~~  225 (444)
                      -.....+.|||||++||.++.|                                    .+|++||+.   .   ..  ..
T Consensus       170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~---~~~~~~~~~~  246 (740)
T 4a5s_A          170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD---SLSSVTNATS  246 (740)
T ss_dssp             SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT---SCCSSSCCCE
T ss_pred             cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC---CCCCCCcceE
Confidence            0112458999999988876422                                    158889988   3   21  23


Q ss_pred             EEEeC------CCCCeeEEEEccCCCEEEEEc----CCCcEEEEEcCCCCc----c--eeEe--ccccCcee-----EEE
Q psy8152         226 LKVDI------PDVALSCITTTNQSHYVIVGS----TTGDMMAVDLRGKGK----P--CYKY--KGFAGCVK-----DIA  282 (444)
Q Consensus       226 ~~~~~------~~~~i~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~----~--~~~~--~~h~~~i~-----~~~  282 (444)
                      ..+..      +...+..++|+|+|+.++...    .+..|++||+.+ ++    +  +..+  ..|...|.     .++
T Consensus       247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~  325 (740)
T 4a5s_A          247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE-SSGRWNCLVARQHIEMSTTGWVGRFRPSEPH  325 (740)
T ss_dssp             EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET-TTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred             EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC-CccccceeEEEEeeeccCCceEccCcCCCce
Confidence            33432      667789999999999766543    234799999998 76    1  2233  34555554     789


Q ss_pred             ecCCCCEEE-EEEC-C--CcEEEEEcCCCceEEEeecCCceeEE
Q psy8152         283 CPLNENLIL-SVSL-D--RHFRVHDFHSKKLLRKDYMQSRLTSI  322 (444)
Q Consensus       283 ~s~~~~~l~-s~~~-d--g~i~vw~~~~~~~~~~~~~~~~i~~~  322 (444)
                      |+|+|+.|+ ..+. +  ..|++|++.+++..........+..+
T Consensus       326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~  369 (740)
T 4a5s_A          326 FTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGI  369 (740)
T ss_dssp             ECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEE
T ss_pred             EcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEE
Confidence            999999777 6654 3  45888998877664433333344444

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.85  E-value=2.4e-19  Score=166.45  Aligned_cols=273  Identities=10%  Similarity=0.035  Sum_probs=181.2

Q ss_pred             CCcccEEEecC-CC--cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           4 ADDYNIYIGSS-TG--AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         4 ~~~~~l~~g~~-dg--~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      +++..|+.++. +|  .|.+|++.+++.     ..+.. +|...+..++|+ |+++.|+.++.++.|++|++.+++....
T Consensus        45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~-----~~lt~-~~~~~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~g~~~~~  117 (388)
T 3pe7_A           45 RDGSKLLFGGAFDGPWNYYLLDLNTQVA-----TQLTE-GRGDNTFGGFLS-PDDDALFYVKDGRNLMRVDLATLEENVV  117 (388)
T ss_dssp             TTSCEEEEEECTTSSCEEEEEETTTCEE-----EECCC-SSCBCSSSCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             CCCCEEEEEEcCCCCceEEEEeCCCCce-----EEeee-CCCCCccceEEc-CCCCEEEEEeCCCeEEEEECCCCcceee
Confidence            45566666665 66  477888877763     11111 455566678899 7999999999999999999999887766


Q ss_pred             eeeccccccE--EEEEeCCCeEEEEe----------------------cCCcEEEEEcCCCCccccccccCCCeEEEEEe
Q psy8152          81 TDVSFGEGDI--VGVSRYDECILTAV----------------------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN  136 (444)
Q Consensus        81 ~~~~~~~~~v--~~~s~~~~~l~~~~----------------------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  136 (444)
                      +..+......  ..+++++++++...                      .+..|++|++.+++.. .+..+...+..++|+
T Consensus       118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~s  196 (388)
T 3pe7_A          118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYR  196 (388)
T ss_dssp             EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEE
T ss_pred             eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEEC
Confidence            5533322211  23368888877432                      3467999999988766 366677789999999


Q ss_pred             c-cCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC--
Q psy8152         137 K-HSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK--  207 (444)
Q Consensus       137 ~-~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--  207 (444)
                      | +++.|+.....      ..|.++++..+... .+..+..                ...+..++|+|+|+.|+..+.  
T Consensus       197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~----------------~~~~~~~~~spdg~~l~~~~~~~  259 (388)
T 3pe7_A          197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAE----------------GESCTHEFWVPDGSALVYVSYLK  259 (388)
T ss_dssp             TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCT----------------TEEEEEEEECTTSSCEEEEEEET
T ss_pred             CCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCC----------------CcccccceECCCCCEEEEEecCC
Confidence            9 99998877753      37888887654432 2222221                014778899999987755433  


Q ss_pred             ---CceEEEEEcCCCCCccceEEEeCCCC---CeeEEEEccCCCEEEEE---------cCCCcEEEEEcCCCCcceeEec
Q psy8152         208 ---QGYVRVYDPKITTQRRPVLKVDIPDV---ALSCITTTNQSHYVIVG---------STTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       208 ---d~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                         +..|++||+. ++..+.+..+..+..   ....++|+|+|+.|+..         ..+..|++||+.+ ++. ..+.
T Consensus       260 ~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~  336 (388)
T 3pe7_A          260 GSPDRFIYSADPE-TLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN-GTQ-HRVA  336 (388)
T ss_dssp             TCCCEEEEEECTT-TCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT-TEE-EEEE
T ss_pred             CCCcceEEEEecC-CCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC-Cce-EEec
Confidence               2249999998 333334444433100   02234799999888754         4566899999987 554 4555


Q ss_pred             cccC-----------ceeEEEecCCCCEEEEEE-CCCcEEEEEc
Q psy8152         273 GFAG-----------CVKDIACPLNENLILSVS-LDRHFRVHDF  304 (444)
Q Consensus       273 ~h~~-----------~i~~~~~s~~~~~l~s~~-~dg~i~vw~~  304 (444)
                      .|..           .+.+++|+|+|++|+..+ .+|...||.+
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          337 RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence            5555           578889999999887666 4666666644

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.83  E-value=3.3e-18  Score=172.15  Aligned_cols=297  Identities=8%  Similarity=0.008  Sum_probs=178.1

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc-----ceEEEeeeccCCcEEEEEEcC---------CeEEE
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA-----SVLALNWGNVEESELLIAYSG---------QKIKI   69 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~~~~~d---------~~i~v   69 (444)
                      .++.+|+++  +|.|++|++.+++..    ..+.  +|..     ....+.|| |++++|+.++.+         +.+.+
T Consensus        26 ~dg~~~~~~--~~~i~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~S-pdg~~l~~~~~~~~~~r~~~~~~~~~   96 (740)
T 4a5s_A           26 SDHEYLYKQ--ENNILVFNAEYGNSS----VFLE--NSTFDEFGHSINDYSIS-PDGQFILLEYNYVKQWRHSYTASYDI   96 (740)
T ss_dssp             SSSEEEEEE--TTEEEEEETTTCCEE----EEEC--TTTTTTCCSCCCEEEEC-TTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             CCCcEEEEc--CCcEEEEECCCCceE----EEEe--chhhhhhcccccceEEC-CCCCEEEEEECCeeeEEEccceEEEE
Confidence            345666665  899999999988741    1122  3332     23457889 799999998876         56779


Q ss_pred             EeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc-ccCCCe-----------------E
Q psy8152          70 YDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF-NVGPQL-----------------E  131 (444)
Q Consensus        70 w~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~v-----------------~  131 (444)
                      ||+.+++...... +.......++||+|+.||.+ .++.|++|++.+++..+... ++...+                 .
T Consensus        97 ~d~~~~~~~~l~~-~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~  174 (740)
T 4a5s_A           97 YDLNKRQLITEER-IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS  174 (740)
T ss_dssp             EETTTTEECCSSC-CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred             EECCCCcEEEccc-CCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence            9999988665321 12233445679999999988 56899999998877654222 232222                 3


Q ss_pred             EEEEeccCCEEEEeeCCCe------------------------------------EEEEEcCC---ce--eeeeeecccc
Q psy8152         132 CMKHNKHSNIIATGGKEND------------------------------------LKLWDLNT---TK--NIFSAKNVSH  170 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~------------------------------------i~vwd~~~---~~--~~~~~~~~~~  170 (444)
                      .+.|+|+|+.||.++.|..                                    |++||+.+   ++  ....+...  
T Consensus       175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~--  252 (740)
T 4a5s_A          175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP--  252 (740)
T ss_dssp             CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC--
T ss_pred             ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC--
Confidence            5899999999998764432                                    44444444   31  11111100  


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe----CCceEEEEEcCCCCC----ccceEEE--eCCCCCee----
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS----KQGYVRVYDPKITTQ----RRPVLKV--DIPDVALS----  236 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~----~~~~~~~--~~~~~~i~----  236 (444)
                                .....+...+..++|+|+++.++...    .+..|++||+. ++.    ...+..+  ..+...+.    
T Consensus       253 ----------~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~-tg~~~~~~~~~~~l~~~~~~~~v~~~~~  321 (740)
T 4a5s_A          253 ----------ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD-ESSGRWNCLVARQHIEMSTTGWVGRFRP  321 (740)
T ss_dssp             ----------HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE-TTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred             ----------ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC-CCccccceeEEEEeeeccCCceEccCcC
Confidence                      00001233689999999998666542    23479999998 222    1112222  44555444    


Q ss_pred             -EEEEccCCCEEE-EEc-CCC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC-----C--cEEEEEc
Q psy8152         237 -CITTTNQSHYVI-VGS-TTG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD-----R--HFRVHDF  304 (444)
Q Consensus       237 -~~~~~~~~~~l~-~~~-~dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g--~i~vw~~  304 (444)
                       .++|+|+|+.|+ ..+ .+|  .|++|++.. +.+. .+......|..+.+ ++++.|+..+..     +  .|+..++
T Consensus       322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~-~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~  398 (740)
T 4a5s_A          322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDK-KDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQL  398 (740)
T ss_dssp             CCCEECTTSSEEEEEEECTTSCEEEEEEETTC-SSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred             CCceEcCCCCEEEEEEEcCCCceEEEEEECCC-CceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEEC
Confidence             789999999876 554 333  588888876 5444 44434455665542 346655544433     3  3444555


Q ss_pred             CCCceEEEeec-----CCceeEEEEcCC
Q psy8152         305 HSKKLLRKDYM-----QSRLTSILVRSD  327 (444)
Q Consensus       305 ~~~~~~~~~~~-----~~~i~~~~~~~~  327 (444)
                      ..+.....+..     ........|+++
T Consensus       399 ~g~~~~~~lt~~~~~~~~~~~~~~~S~d  426 (740)
T 4a5s_A          399 IDYTKVTCLSCELNPERCQYYSVSFSKE  426 (740)
T ss_dssp             TEEEEEEESSTTTSTTTBCBEEEEECTT
T ss_pred             CCCCcceeeccccCCCCCceEEEEECCC
Confidence            54433222321     245667777655

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.83  E-value=1e-18  Score=173.96  Aligned_cols=288  Identities=8%  Similarity=-0.045  Sum_probs=186.5

Q ss_pred             CcccceEEEeeeccCCcEEEEE--EcCCeEEEEeCCCCccccceeecccccc-----------EEEEE--eCCCe-EEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIA--YSGQKIKIYDTDFKNFNTNTDVSFGEGD-----------IVGVS--RYDEC-ILTA  103 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~--~~d~~i~vw~~~~~~~~~~~~~~~~~~~-----------v~~~s--~~~~~-l~~~  103 (444)
                      +|...|..++|+ ++.-++++.  +.++...||....+.....+.  .+...           ...++  |+|++ |+.+
T Consensus        21 ~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~   97 (662)
T 3azo_A           21 SRSGRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRADGAEESAL--PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT   97 (662)
T ss_dssp             HTCSCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTTSCEEESS--CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred             hcCCccceeEEc-CCeEEEEecCcccCCcEEEEEECCCCCcceeC--CCCccccccccccCCccceeeeecCCCeEEEEE
Confidence            688999999999 565555555  447889999854333333332  22222           23344  89998 7766


Q ss_pred             ec-CCcEEEEEcC--C-CCccccccc-----cCCCeEEEEEeccCCEEEEeeCC----------CeEEEEEcCC------
Q psy8152         104 VK-SGDVKLWRYK--T-EPDQWTNFN-----VGPQLECMKHNKHSNIIATGGKE----------NDLKLWDLNT------  158 (444)
Q Consensus       104 ~~-dg~i~iw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vwd~~~------  158 (444)
                      +. +..|.+|++.  . +... .+..     |...+..++|+|+|+.|++++.+          ..|++|++.+      
T Consensus        98 ~~~~~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  176 (662)
T 3azo_A           98 HFGDQRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR  176 (662)
T ss_dssp             BTTTCCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred             ECCCCeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence            54 5567777765  3 4433 3444     56778999999999999998876          5899999987      


Q ss_pred             ceeeeeee-cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC--------ceEEEEEcCCCCC-ccceEEE
Q psy8152         159 TKNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ--------GYVRVYDPKITTQ-RRPVLKV  228 (444)
Q Consensus       159 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~-~~~~~~~  228 (444)
                      ++.. .+. .+..                  .+..++|+|+|++|+.++.+        ..|++||+..++. .......
T Consensus       177 ~~~~-~l~~~~~~------------------~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~  237 (662)
T 3azo_A          177 SAVR-ELSDDAHR------------------FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL  237 (662)
T ss_dssp             GGSE-ESSCSCSS------------------EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred             Ccee-EEEecCCC------------------cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence            5443 332 2222                  57889999999999877754        4899999981111 1233323


Q ss_pred             eCCCCCeeEEEEccCCCEEEEEcCCC--cEEEEEcCCCCcceeEeccccCc--------eeEEEecCCCCEEEEEECCCc
Q psy8152         229 DIPDVALSCITTTNQSHYVIVGSTTG--DMMAVDLRGKGKPCYKYKGFAGC--------VKDIACPLNENLILSVSLDRH  298 (444)
Q Consensus       229 ~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~h~~~--------i~~~~~s~~~~~l~s~~~dg~  298 (444)
                      ..+...+..++|+|+|++++++..++  .|++|++.. ++.......+...        +..++|+|+++++++++. +.
T Consensus       238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~  315 (662)
T 3azo_A          238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA  315 (662)
T ss_dssp             EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred             CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence            34567789999999999888888888  566677656 5544433333222        567899999999999998 99


Q ss_pred             EEEE--EcCCCceEEEee-cCCceeEE-EEcCCCcccccchhhhhccccccCCCcccc--CCCccccccc
Q psy8152         299 FRVH--DFHSKKLLRKDY-MQSRLTSI-LVRSDFSLENETKKEEQEHSEEKGDSDEKY--DPEHFEMNQV  362 (444)
Q Consensus       299 i~vw--~~~~~~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W--~~~~~~~~~~  362 (444)
                      ++||  ++.+++ +..+. +...+..+ .+.         ++..++++.+.+....+|  ++.+++...+
T Consensus       316 ~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~---------~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l  375 (662)
T 3azo_A          316 AVLGILDPESGE-LVDAAGPWTEWAATLTVS---------GTRAVGVAASPRTAYEVVELDTVTGRARTI  375 (662)
T ss_dssp             CEEEEEETTTTE-EEECCSSCCEEEEEEEEE---------TTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred             cEEEEEECCCCc-EEEecCCCCeEEEEEecC---------CCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence            9999  555555 34443 44455554 322         222344444555444444  5545544433

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.83  E-value=7.7e-18  Score=149.44  Aligned_cols=241  Identities=10%  Similarity=0.090  Sum_probs=173.9

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec----cccccEEEEE---eCCCeEEEEec-CCcEEE
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS----FGEGDIVGVS---RYDECILTAVK-SGDVKL  111 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~----~~~~~v~~~s---~~~~~l~~~~~-dg~i~i  111 (444)
                      +|-..+.+++++ +++.++++...++.|++|+.. ++....+...    .+...+..+.   +++.++++... ++.|++
T Consensus        27 g~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~  104 (286)
T 1q7f_A           27 GQFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI  104 (286)
T ss_dssp             TCBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred             CccCCCceEEEC-CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence            556788999999 788888888888999999987 5555444321    1223344443   34555555433 889999


Q ss_pred             EEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         112 WRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       112 w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      |+ .+++.+..+. .+...+.+++++|+++++++...++.|.+|+.. ++.+..+.....                ...+
T Consensus       105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~----------------~~~p  166 (286)
T 1q7f_A          105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH----------------LEFP  166 (286)
T ss_dssp             EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTT----------------CSSE
T ss_pred             EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc----------------cCCc
Confidence            99 4555554332 244578999999999988888888999999965 454444432111                1148


Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCCEEEEEcCCC-cEEEEEcCCCCcc
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSHYVIVGSTTG-DMMAVDLRGKGKP  267 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~  267 (444)
                      .+++++|+++++++...++.|++|+..    ...+..+..+  ...+..++++|+|+++++...++ .|++|+. . ++.
T Consensus       167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~-g~~  240 (286)
T 1q7f_A          167 NGVVVNDKQEIFISDNRAHCVKVFNYE----GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-D-GQL  240 (286)
T ss_dssp             EEEEECSSSEEEEEEGGGTEEEEEETT----CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-T-SCE
T ss_pred             EEEEECCCCCEEEEECCCCEEEEEcCC----CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-C-CCE
Confidence            899999999888888889999999977    3444555433  35688999999999888887776 9999995 4 677


Q ss_pred             eeEecccc--CceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         268 CYKYKGFA--GCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       268 ~~~~~~h~--~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      +..+..+.  ..+.+++++|+|+++++ +.+++|++|++...
T Consensus       241 ~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          241 ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence            77776543  34779999999987776 67999999998654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.83  E-value=1.1e-17  Score=151.30  Aligned_cols=282  Identities=7%  Similarity=-0.070  Sum_probs=196.5

Q ss_pred             CCCcEEEEEcCCCccceeee-eeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE
Q psy8152          14 STGAFKGVNLSKDKCIIKNI-QNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG   92 (444)
Q Consensus        14 ~dg~i~i~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~   92 (444)
                      .++.|.+||..+++.. ..+ ..............+++.  .+..+++...++.|.+||..+++.+..+.. .....-.+
T Consensus        15 ~~~~l~~~d~~t~~~~-~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~   90 (328)
T 3dsm_A           15 SNATLSYYDPATCEVE-NEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIH   90 (328)
T ss_dssp             CCBEEEEEETTTTEEE-CSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEE
T ss_pred             CCceEEEEECCCCEEh-hhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEE
Confidence            3789999999988742 111 100100122446778776  355555666679999999999998887742 22333455


Q ss_pred             EEeCCCeEEEEecCCcEEEEEcCCCCccccccccC-----CCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeee
Q psy8152          93 VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVG-----PQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSA  165 (444)
Q Consensus        93 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~  165 (444)
                      ++++++++++...++.|.+||+.+++....+....     .....+++ . +..|+++.  .++.|.+||+.+++.+..+
T Consensus        91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i  168 (328)
T 3dsm_A           91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDEL  168 (328)
T ss_dssp             EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence            67888544444488999999999887664222111     15567777 3 44555544  4889999999998887766


Q ss_pred             ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC----------ceEEEEEcCCCCCccceEEEeCC-CCC
Q psy8152         166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ----------GYVRVYDPKITTQRRPVLKVDIP-DVA  234 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~-~~~  234 (444)
                      .....                   ...++++|++++++++..+          +.|.+||..   ..+....+... ...
T Consensus       169 ~~g~~-------------------p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~---t~~v~~~~~~~~g~~  226 (328)
T 3dsm_A          169 TIGIQ-------------------PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE---TFTVEKQFKFKLGDW  226 (328)
T ss_dssp             ECSSC-------------------BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT---TTEEEEEEECCTTCC
T ss_pred             EcCCC-------------------ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC---CCeEEEEEecCCCCC
Confidence            54333                   5678999999877776655          789999998   56665555432 235


Q ss_pred             eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE--eccccCceeEEEecCC-CCEEEEE----ECCCcEEEEEcCCC
Q psy8152         235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK--YKGFAGCVKDIACPLN-ENLILSV----SLDRHFRVHDFHSK  307 (444)
Q Consensus       235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~h~~~i~~~~~s~~-~~~l~s~----~~dg~i~vw~~~~~  307 (444)
                      ...++|+|++++|+++..  .|.+||+.+ ++....  +..+......++++|+ +.++++.    ..++.|.+|+.. +
T Consensus       227 p~~la~~~d~~~lyv~~~--~v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g  302 (328)
T 3dsm_A          227 PSEVQLNGTRDTLYWINN--DIWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G  302 (328)
T ss_dssp             CEEEEECTTSCEEEEESS--SEEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred             ceeEEEecCCCEEEEEcc--EEEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence            789999999999988765  899999988 665421  2222456889999994 5555665    568899999998 9


Q ss_pred             ceEEEeecCCceeEEEEcCC
Q psy8152         308 KLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~~  327 (444)
                      +++.++........++|.+.
T Consensus       303 ~~~~~i~~G~~P~~~~~~~~  322 (328)
T 3dsm_A          303 KLIDEFYVGIIPGAFCWKLE  322 (328)
T ss_dssp             CEEEEEEEEESEEEEEEECC
T ss_pred             CEEEEEEeccCcceEEEecc
Confidence            99998887777788887654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.83  E-value=5.2e-18  Score=153.68  Aligned_cols=249  Identities=8%  Similarity=0.037  Sum_probs=181.2

Q ss_pred             ccceEEEeeeccCCcEEEEEEcC------------------------CeEEEEeCCCCccccceeeccc--cccEEEEEe
Q psy8152          42 KASVLALNWGNVEESELLIAYSG------------------------QKIKIYDTDFKNFNTNTDVSFG--EGDIVGVSR   95 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d------------------------~~i~vw~~~~~~~~~~~~~~~~--~~~v~~~s~   95 (444)
                      -+.|.+|+++ ++++++++...+                        +.|.+||..+++....+. ..+  ...-.++++
T Consensus        23 l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~p~gia~d~  100 (329)
T 3fvz_A           23 PGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG-KNLFYLPHGLSIDT  100 (329)
T ss_dssp             CSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC-TTTCSSEEEEEECT
T ss_pred             cCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC-CCccCCceEEEECC
Confidence            4679999999 789888887776                        479999998888765543 122  222355678


Q ss_pred             CCCeEEEEecCCcEEEEEcCCCC-ccccc---------cccCCCeEEEEEec-cCCEEEEee-CCCeEEEEEcCCceeee
Q psy8152          96 YDECILTAVKSGDVKLWRYKTEP-DQWTN---------FNVGPQLECMKHNK-HSNIIATGG-KENDLKLWDLNTTKNIF  163 (444)
Q Consensus        96 ~~~~l~~~~~dg~i~iw~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~vwd~~~~~~~~  163 (444)
                      +++++++...++.|++|+..... .+..+         ..+......++++| ++.++++.+ .++.|++|+ ..++.+.
T Consensus       101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~  179 (329)
T 3fvz_A          101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT  179 (329)
T ss_dssp             TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred             CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence            89988888889999999986542 33222         23444689999999 888888886 689999999 4566665


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEE
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITT  240 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~  240 (444)
                      .+......        .......-..+..|+++|+ +.++++...++.|++|+..   .++.+..+.  .+...+..++|
T Consensus       180 ~~~~~g~~--------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~---~G~~~~~~~~~~~~~~~~~~~~  248 (329)
T 3fvz_A          180 QWGEESSG--------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD---TKEFVREIKHASFGRNVFAISY  248 (329)
T ss_dssp             EECEECCS--------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT---TCCEEEEECCTTTTTCEEEEEE
T ss_pred             EeccCCCC--------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC---CCcEEEEEeccccCCCcceeee
Confidence            55322210        0000000114789999998 6777888889999999988   566666663  34567889999


Q ss_pred             ccCCCEEEE-------EcCCCcEEEEEcCCCCcceeEec---cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         241 TNQSHYVIV-------GSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       241 ~~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      +| +..+++       ...+..|++|++.+ ++.+..+.   ++...+..|+++|+|.++++...++.|++|++..
T Consensus       249 ~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          249 IP-GFLFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             ET-TEEEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             cC-CEEEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            99 433333       33455899999999 99988884   5677789999999998888888899999999754

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.82  E-value=3.8e-19  Score=165.50  Aligned_cols=277  Identities=8%  Similarity=-0.047  Sum_probs=178.0

Q ss_pred             ccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      ...+.+++|+ |++++|+.+...   ..|++|++.+++................++|++++|+.++.++.|++|++.+++
T Consensus        35 ~~~~~~~~~S-pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~  113 (396)
T 3c5m_A           35 RNYFYQKCFT-QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE  113 (396)
T ss_dssp             CCCTTSCCBC-TTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred             ceeeecCcCC-CCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence            3447889999 799998876543   478889998877654432111112225679999999999999999999999887


Q ss_pred             ccccccccCCCeEE-------------------EEEeccCCEEEEe-----eCCCeEEEEEcCCceeeeeeecccceeeE
Q psy8152         119 DQWTNFNVGPQLEC-------------------MKHNKHSNIIATG-----GKENDLKLWDLNTTKNIFSAKNVSHRVLV  174 (444)
Q Consensus       119 ~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~  174 (444)
                      .......+......                   +.|+|+++.++.+     ..+..|.+||+.+++...... +..    
T Consensus       114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~----  188 (396)
T 3c5m_A          114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTA----  188 (396)
T ss_dssp             EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESS----
T ss_pred             cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCc----
Confidence            65433323332222                   3456666666544     356689999998876554432 222    


Q ss_pred             eeeCCCcccccCccceeEEEEec-CCCEEEEEeCC------ceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCC
Q psy8152         175 YSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQ------GYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSH  245 (444)
Q Consensus       175 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~  245 (444)
                                    .+..+.|+| +++.|+..+.+      ..|.+|++.   ... ...+..+  ...+..++|+|+|+
T Consensus       189 --------------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~~-~~~l~~~~~~~~~~~~~~spdg~  250 (396)
T 3c5m_A          189 --------------WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED---GSN-VRKIKEHAEGESCTHEFWIPDGS  250 (396)
T ss_dssp             --------------CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT---SCC-CEESSCCCTTEEEEEEEECTTSS
T ss_pred             --------------ccccceECCCCCCEEEEEecCCCCCCCceEEEEECC---CCc-eeEeeccCCCccccceEECCCCC
Confidence                          588999999 78767665543      368888887   222 2222222  23577899999999


Q ss_pred             EEEEEcCC-----CcEEEEEcCCCCcceeEeccccCceeEEEecC-CCCEEEEEE----------------CCCcEEEEE
Q psy8152         246 YVIVGSTT-----GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL-NENLILSVS----------------LDRHFRVHD  303 (444)
Q Consensus       246 ~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~-~~~~l~s~~----------------~dg~i~vw~  303 (444)
                      +|+.++.+     +.|++||+.+ ++...... ... .. +.|+| ++++|++++                .+..|++|+
T Consensus       251 ~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d  326 (396)
T 3c5m_A          251 AMAYVSYFKGQTDRVIYKANPET-LENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN  326 (396)
T ss_dssp             CEEEEEEETTTCCEEEEEECTTT-CCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEE
T ss_pred             EEEEEecCCCCccceEEEEECCC-CCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEe
Confidence            87776443     4499999987 65433222 111 23 88999 999888765                347899999


Q ss_pred             cCCCceEEEeecCCc-----------eeEEEEcCCCcccccchhhhhccccc-cCCCccccCCC
Q psy8152         304 FHSKKLLRKDYMQSR-----------LTSILVRSDFSLENETKKEEQEHSEE-KGDSDEKYDPE  355 (444)
Q Consensus       304 ~~~~~~~~~~~~~~~-----------i~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~i~~W~~~  355 (444)
                      +.+++......+...           +..++|+         |+++.++..+ .++...||.+.
T Consensus       327 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s---------~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          327 TKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFT---------PNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             TTTTBCCEEEECCCCCCCBTTBSSTTCCCCEEC---------TTSSEEEEEECTTSSCEEEEEE
T ss_pred             cccCceEEccCCCCccccccccccCCCCCceEc---------cCCCeEEEEecCCCCceEEEEE
Confidence            988775433233331           3444554         4455555443 45666676543

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.80  E-value=2e-18  Score=160.58  Aligned_cols=273  Identities=8%  Similarity=-0.028  Sum_probs=173.9

Q ss_pred             CCcccEEEec-CC--CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           4 ADDYNIYIGS-ST--GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         4 ~~~~~l~~g~-~d--g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      +++.+|+... .+  ..|.+|++.+++.     ..+.. ++......+.|+ |++++|+.++.++.|++|++.+++....
T Consensus        45 pdG~~l~~~~~~~g~~~l~~~d~~~~~~-----~~l~~-~~~~~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~  117 (396)
T 3c5m_A           45 QDGKKLLFAGDFDGNRNYYLLNLETQQA-----VQLTE-GKGDNTFGGFIS-TDERAFFYVKNELNLMKVDLETLEEQVI  117 (396)
T ss_dssp             TTSCEEEEEECTTSSCEEEEEETTTTEE-----EECCC-SSCBCTTTCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             CCCCEEEEEEecCCCceEEEEECCCCcE-----EEeec-CCCCccccceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence            3455555543 33  4678888877662     22211 222233347899 7999999999999999999988876655


Q ss_pred             eeeccccccE-------------------EEEEeCCCeEEEE-----ecCCcEEEEEcCCCCccccccccCCCeEEEEEe
Q psy8152          81 TDVSFGEGDI-------------------VGVSRYDECILTA-----VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN  136 (444)
Q Consensus        81 ~~~~~~~~~v-------------------~~~s~~~~~l~~~-----~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  136 (444)
                      +..+..-.+.                   ..++|+++.++.+     ..+..|++|++.+++... +..+...+..+.|+
T Consensus       118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-~~~~~~~~~~~~~s  196 (396)
T 3c5m_A          118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV-IHQDTAWLGHPIYR  196 (396)
T ss_dssp             EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEE
T ss_pred             EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe-eccCCcccccceEC
Confidence            4422210000                   1235566655543     355689999999887664 45677789999999


Q ss_pred             c-cCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-
Q psy8152         137 K-HSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-  208 (444)
Q Consensus       137 ~-~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-  208 (444)
                      | ++..|+..+.+      ..|.+|++..++...... +..                ...+..++|+|++++|+.++.+ 
T Consensus       197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~----------------~~~~~~~~~spdg~~l~~~~~~~  259 (396)
T 3c5m_A          197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE----------------GESCTHEFWIPDGSAMAYVSYFK  259 (396)
T ss_dssp             TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT----------------TEEEEEEEECTTSSCEEEEEEET
T ss_pred             CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC----------------CccccceEECCCCCEEEEEecCC
Confidence            9 88877766543      368888887654322221 110                1147889999999877766543 


Q ss_pred             ----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEEEEEc----------------CCCcEEEEEcCCCCcc
Q psy8152         209 ----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN-QSHYVIVGS----------------TTGDMMAVDLRGKGKP  267 (444)
Q Consensus       209 ----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~----------------~dg~i~iwd~~~~~~~  267 (444)
                          +.|++||+. ++....+..+.   . .. +.|+| +|++|++++                .++.|++||+.+ ++.
T Consensus       260 ~~~~~~l~~~d~~-~g~~~~l~~~~---~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~  332 (396)
T 3c5m_A          260 GQTDRVIYKANPE-TLENEEVMVMP---P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSA  332 (396)
T ss_dssp             TTCCEEEEEECTT-TCCEEEEEECC---S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT-TBC
T ss_pred             CCccceEEEEECC-CCCeEEeeeCC---C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc-Cce
Confidence                559999998 22222222222   1 33 88999 999888754                346899999987 654


Q ss_pred             eeEeccccC-----------ceeEEEecCCCCEEEEEEC-CCcEEE--EEcCCCce
Q psy8152         268 CYKYKGFAG-----------CVKDIACPLNENLILSVSL-DRHFRV--HDFHSKKL  309 (444)
Q Consensus       268 ~~~~~~h~~-----------~i~~~~~s~~~~~l~s~~~-dg~i~v--w~~~~~~~  309 (444)
                       ..+..+..           .+..++|+|+|+.|+.++. ++...|  +++.+++.
T Consensus       333 -~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~  387 (396)
T 3c5m_A          333 -QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK  387 (396)
T ss_dssp             -CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred             -EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence             44554443           2567899999998887764 454444  45555443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.79  E-value=6.1e-17  Score=161.18  Aligned_cols=267  Identities=7%  Similarity=-0.047  Sum_probs=172.7

Q ss_pred             cCCCcEEEEEcCCCccceeeeeeecccCcccceE---------EEeeec-cCCcE-EEEEEc-CCeEEEEeCC--C-Ccc
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVL---------ALNWGN-VEESE-LLIAYS-GQKIKIYDTD--F-KNF   77 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~~-~~~~~-l~~~~~-d~~i~vw~~~--~-~~~   77 (444)
                      +.++...||....+.. .   ..+.  .|...+.         ...|+. |++++ |+.++. +..|++|++.  + +..
T Consensus        44 ~~~~~~~l~~~~~~~~-~---~~l~--~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~  117 (662)
T 3azo_A           44 AEAGRATLVRRRADGA-E---ESAL--PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP  117 (662)
T ss_dssp             TTTTEEEEEEECTTSC-E---EESS--CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC
T ss_pred             ccCCcEEEEEECCCCC-c---ceeC--CCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC
Confidence            4478899998643332 1   2222  4445555         555652 68888 766554 5677777775  3 443


Q ss_pred             ccceeecc---ccccE--EEEEeCCCeEEEEecC----------CcEEEEEcCC------CCcccccc-ccCCCeEEEEE
Q psy8152          78 NTNTDVSF---GEGDI--VGVSRYDECILTAVKS----------GDVKLWRYKT------EPDQWTNF-NVGPQLECMKH  135 (444)
Q Consensus        78 ~~~~~~~~---~~~~v--~~~s~~~~~l~~~~~d----------g~i~iw~~~~------~~~~~~~~-~~~~~v~~~~~  135 (444)
                      . .+....   |...+  .+++|+|+.|++++.+          ..|++|++.+      ++.. .+. .+...+..++|
T Consensus       118 ~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~  195 (662)
T 3azo_A          118 R-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRL  195 (662)
T ss_dssp             E-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEE
T ss_pred             E-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceE
Confidence            2 222111   33333  5678999999988876          5899999987      5544 355 56677889999


Q ss_pred             eccCCEEEEeeCC--------CeEEEEEcC-Cc---eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         136 NKHSNIIATGGKE--------NDLKLWDLN-TT---KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       136 ~~~~~~l~~~~~d--------~~i~vwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      +|+|++|+.++.+        ..|++|++. ++   +.......+..                  .+..++|+|+|++++
T Consensus       196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~------------------~~~~~~~spdg~l~~  257 (662)
T 3azo_A          196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE------------------AIAQAEWAPDGSLIV  257 (662)
T ss_dssp             CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB------------------CEEEEEECTTSCEEE
T ss_pred             CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc------------------eEcceEECCCCeEEE
Confidence            9999999988755        379999998 56   33333333333                  589999999999888


Q ss_pred             EEeCCc--eEEEEEcCCCCCccceEEEeCCCCC---------eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         204 VCSKQG--YVRVYDPKITTQRRPVLKVDIPDVA---------LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       204 ~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      ++..++  .|.+|++.   ..... .+..+...         +..++|+|+++++++++. +.++||.+...+..+..+.
T Consensus       258 ~~~~~~~~~l~~~~~~---~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~  332 (662)
T 3azo_A          258 ATDRTGWWNLHRVDPA---TGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAA  332 (662)
T ss_dssp             EECTTSSCEEEEECTT---TCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECC
T ss_pred             EECCCCCeEEEEEECC---CCcee-ecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEec
Confidence            888888  56666654   22222 22222211         567899999999999998 9999994432134477788


Q ss_pred             cccCceeEE-EecCCCCEEEEEECCC--cEEEEEcCCCceE
Q psy8152         273 GFAGCVKDI-ACPLNENLILSVSLDR--HFRVHDFHSKKLL  310 (444)
Q Consensus       273 ~h~~~i~~~-~~s~~~~~l~s~~~dg--~i~vw~~~~~~~~  310 (444)
                      .|...+..+ +++++.-++++++.+.  .|++|++.+++..
T Consensus       333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~  373 (662)
T 3azo_A          333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR  373 (662)
T ss_dssp             SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred             CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence            787778777 5544333444555554  4556677676653

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.79  E-value=5.1e-17  Score=148.34  Aligned_cols=259  Identities=8%  Similarity=0.010  Sum_probs=174.3

Q ss_pred             ccceEEEeeeccCCcEEEEEE---------cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC---C--
Q psy8152          42 KASVLALNWGNVEESELLIAY---------SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS---G--  107 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~---------~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d---g--  107 (444)
                      ...+..+++   ++++++...         .++.|++|++.+++....     .......++|+|++|+.++.+   +  
T Consensus        14 ~~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~   85 (347)
T 2gop_A           14 FAYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVS   85 (347)
T ss_dssp             SCEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred             eEEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence            345566666   477776542         257899999988764332     234456789999998887754   2  


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC---------------------------CeEEEEEcCCce
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE---------------------------NDLKLWDLNTTK  160 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~i~vwd~~~~~  160 (444)
                      .|.+|++.+++... +..+.. +..++|+|+++.|+.++.+                           ..|.+|++.+++
T Consensus        86 ~l~~~~~~~g~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~  163 (347)
T 2gop_A           86 EIWVADLETLSSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE  163 (347)
T ss_dssp             EEEEEETTTTEEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred             eEEEEECCCCceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence            37888888877654 444444 9999999999999887642                           568899998877


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-------eEEEEEcCCCCCccceEEEeCCCC
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-------YVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      .+..+... .                   +..++|+|++ +++++..+.       ...||.+. +...   ..+..+ .
T Consensus       164 ~~~~l~~~-~-------------------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~---~~l~~~-~  217 (347)
T 2gop_A          164 VIEEFEKP-R-------------------FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKE---EKMFEK-V  217 (347)
T ss_dssp             EEEEEEEE-T-------------------TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEE---EEEEEE-E
T ss_pred             EEeeecCC-C-------------------cccccCCCCe-EEEEEecccccccccccccEEEeC-CCce---EEeccC-c
Confidence            63333321 3                   7789999999 777775542       33444443 1222   222223 3


Q ss_pred             CeeEEEEccCCCEEEEEcCC--------CcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEEEEECCCcEEEEEc
Q psy8152         234 ALSCITTTNQSHYVIVGSTT--------GDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+..+  +|+|++|+.++.+        ..|++||  + ++.......|...+.. +.|+ ++ ++++++.++.++|| +
T Consensus       218 ~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~  289 (347)
T 2gop_A          218 SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-I  289 (347)
T ss_dssp             SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred             ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence            44443  9999988876644        3688888  5 6655555566778886 8999 88 89999999999999 8


Q ss_pred             CCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCc-cccCCC
Q psy8152         305 HSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD-EKYDPE  355 (444)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i-~~W~~~  355 (444)
                      .+++......+...+.+++|++           ..+++++.++.. +||.+.
T Consensus       290 ~~g~~~~~~~~~~~v~~~~~s~-----------~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          290 WDGEIKPIAKGRHWIMGFDVDE-----------IVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             ESSSEEEEECSSSEEEEEEESS-----------SEEEEEECSSSCCEEEEES
T ss_pred             cCCceEEEecCCCeEEeeeeeC-----------cEEEEEcCCCChHHheEeC
Confidence            8766644444666788887763           244555555554 778665

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.78  E-value=9.3e-17  Score=146.60  Aligned_cols=242  Identities=6%  Similarity=-0.013  Sum_probs=164.4

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---C--eEEEEeCCCCccccceeecccccc
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---Q--KIKIYDTDFKNFNTNTDVSFGEGD   89 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~--~i~vw~~~~~~~~~~~~~~~~~~~   89 (444)
                      ++.|.+|++.+++.     ..+      ..+..++|+ |++++|+.++.+   +  .|++|++.+++........  ...
T Consensus        42 ~~~l~~~d~~~~~~-----~~l------~~~~~~~~S-pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~~~  107 (347)
T 2gop_A           42 ENTIVIENLKNNAR-----RFI------ENATMPRIS-PDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK--NIR  107 (347)
T ss_dssp             EEEEEEEETTTCCE-----EEE------ESCEEEEEC-TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES--EEE
T ss_pred             cceEEEEeCCCCce-----EEc------ccCCCeEEC-CCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC--Ccc
Confidence            66788999887762     112      467889999 799999987754   2  4888888887766554322  233


Q ss_pred             EEEEEeCCCeEEEEecC---------------------------CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE
Q psy8152          90 IVGVSRYDECILTAVKS---------------------------GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        90 v~~~s~~~~~l~~~~~d---------------------------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      ...++|+++.|+.++.+                           ..|++|++.+++.+..+.. . .+..++|+|++ ++
T Consensus       108 ~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~  184 (347)
T 2gop_A          108 SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IV  184 (347)
T ss_dssp             EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EE
T ss_pred             ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EE
Confidence            34568899988887642                           5799999988876222333 3 78899999999 77


Q ss_pred             EEeeCCC-------eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-------
Q psy8152         143 ATGGKEN-------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-------  208 (444)
Q Consensus       143 ~~~~~d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------  208 (444)
                      +++..++       ...||.+.+++. ..+..+ .                  .+..+  +|+|++|+.++.+       
T Consensus       185 ~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~------------------~~~~~--spdg~~l~~~~~~~~~~~~~  242 (347)
T 2gop_A          185 VNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-V------------------SFYAV--DSDGERILLYGKPEKKYMSE  242 (347)
T ss_dssp             EEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-E------------------SEEEE--EECSSCEEEEECCSSSCCCS
T ss_pred             EEEecccccccccccccEEEeCCCce-EEeccC-c------------------ceeeE--CCCCCEEEEEEccccCCccc
Confidence            7776542       334444444433 222222 2                  34444  9999888776644       


Q ss_pred             -ceEEEEEcCCCCCccceEEEeCCCCCeeE-EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         209 -GYVRVYDPKITTQRRPVLKVDIPDVALSC-ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       209 -~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                       ..|.+|| .    ......+..+...+.. +.|+ ++ ++++++.++.++|| +.+ ++....+ .+...|.+++|+| 
T Consensus       243 ~~~l~~~d-~----~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~-g~~~~~~-~~~~~v~~~~~s~-  311 (347)
T 2gop_A          243 HNKLYIYD-G----KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD-GEIKPIA-KGRHWIMGFDVDE-  311 (347)
T ss_dssp             SCEEEEEC-S----SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES-SSEEEEE-CSSSEEEEEEESS-
T ss_pred             cceEEEEC-C----CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC-CceEEEe-cCCCeEEeeeeeC-
Confidence             3678887 4    2222223345667776 8999 88 88889999999999 886 7654444 4577899999999 


Q ss_pred             CCEEEEEECCCcE-EEEEcCCCc
Q psy8152         287 ENLILSVSLDRHF-RVHDFHSKK  308 (444)
Q Consensus       287 ~~~l~s~~~dg~i-~vw~~~~~~  308 (444)
                       .++++++.++.. .||.+. ++
T Consensus       312 -~~~~~~~~~~~~~~l~~~~-g~  332 (347)
T 2gop_A          312 -IVVYLKETATRLRELFTWD-GE  332 (347)
T ss_dssp             -SEEEEEECSSSCCEEEEES-SS
T ss_pred             -cEEEEEcCCCChHHheEeC-Cc
Confidence             677777777665 777776 54

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.78  E-value=1.3e-16  Score=146.13  Aligned_cols=265  Identities=11%  Similarity=-0.002  Sum_probs=179.3

Q ss_pred             CCcccEEEec----------CCCcEEEEEcCCCccceeeeeeecc-cCcccceEEEeeeccCCcEEEEEEc--CCeEEEE
Q psy8152           4 ADDYNIYIGS----------STGAFKGVNLSKDKCIIKNIQNVKY-ITNKASVLALNWGNVEESELLIAYS--GQKIKIY   70 (444)
Q Consensus         4 ~~~~~l~~g~----------~dg~i~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~~~~~--d~~i~vw   70 (444)
                      +++.++++++          .++.|.+||+.+.+. ...+..... ..+......++|+ |++++|+++..  ++.|.+|
T Consensus        59 pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-~~~i~~~~~~~~~g~~p~~i~~s-pdg~~l~v~n~~~~~~v~v~  136 (361)
T 2oiz_A           59 NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-EKEISLPPKRVQGLNYDGLFRQT-TDGKFIVLQNASPATSIGIV  136 (361)
T ss_dssp             TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-EEEEEECTTBCCBCCCGGGEEEC-TTSSEEEEEEESSSEEEEEE
T ss_pred             CCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-EEEEEcCccccccCCCcceEEEC-CCCCEEEEECCCCCCeEEEE
Confidence            4567777775          367899999887664 222221110 1134567889999 79999998875  5899999


Q ss_pred             eCCCCccccc-eeeccccccEEEEEeCC-CeEEEEecCCcEEEEEcCC-CCccc------cccccCCCeEEEEEeccCCE
Q psy8152          71 DTDFKNFNTN-TDVSFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKT-EPDQW------TNFNVGPQLECMKHNKHSNI  141 (444)
Q Consensus        71 ~~~~~~~~~~-~~~~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~-~~~~~------~~~~~~~~v~~~~~~~~~~~  141 (444)
                      |+.+++.+.. +...+  .....+.|++ ..+++.+.||.+.+|++.. ++...      .+.....+ ..+.+++++..
T Consensus       137 d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~  213 (361)
T 2oiz_A          137 DVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDK  213 (361)
T ss_dssp             ETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSE
T ss_pred             ECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCE
Confidence            9999987766 54221  1113455655 5678888999999999865 44331      11112222 23444677777


Q ss_pred             EEEeeCCCeEEEEEcCCceee--eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-----------C
Q psy8152         142 IATGGKENDLKLWDLNTTKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-----------Q  208 (444)
Q Consensus       142 l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------d  208 (444)
                      ++..+.++.|.++|+......  ..+...........+.|        .....++|+|+++.++++..           .
T Consensus       214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p--------~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~  285 (361)
T 2oiz_A          214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP--------GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA  285 (361)
T ss_dssp             EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE--------CCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred             EEEEeCCCeEEEEEecCCCceecccccccCcccccccccc--------CCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence            787888899999999754321  11111000000000000        11223789999877776543           3


Q ss_pred             ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC--cceeEeccccCceeEEEecCC
Q psy8152         209 GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG--KPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       209 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      +.|.+||+.   ..+.+.++..+.  +.+++|+|+|++|++++. +.|.+||+.+ +  +.+.++..+......++++|+
T Consensus       286 ~~v~viD~~---t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t-~~l~~~~~i~~~G~~P~~~~~~p~  358 (361)
T 2oiz_A          286 AEIWVMDTK---TKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ-PEPKLLRTIEGAAEASLQVQFHPV  358 (361)
T ss_dssp             SEEEEEETT---TTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS-SSCEEEEEETTSCSSEEEEEECCC
T ss_pred             ceEEEEECC---CCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC-CcceeeEEeccCCCCcEEEEecCC
Confidence            589999999   788888888777  899999999999999887 9999999999 9  999998667777889999999


Q ss_pred             CC
Q psy8152         287 EN  288 (444)
Q Consensus       287 ~~  288 (444)
                      |+
T Consensus       359 G~  360 (361)
T 2oiz_A          359 GG  360 (361)
T ss_dssp             SC
T ss_pred             CC
Confidence            85

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.78  E-value=4.1e-16  Score=156.25  Aligned_cols=246  Identities=8%  Similarity=-0.045  Sum_probs=175.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCC-----eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQ-----KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------  108 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~-----~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------  108 (444)
                      +|...+..++|| |++++|+.++.++     .|++||+.+++...... ......-.+++|+|+.|+.++.++.      
T Consensus       122 ~~~~~~~~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~  199 (710)
T 2xdw_A          122 DGTVALRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDG  199 (710)
T ss_dssp             TSCEEEEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred             CCCEEEEEEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccc
Confidence            455678999999 8999998776543     89999999988765322 2222344678999999999888766      


Q ss_pred             ----------EEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeC-----CCeEEEEEcCC------ce-ee
Q psy8152         109 ----------VKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGK-----ENDLKLWDLNT------TK-NI  162 (444)
Q Consensus       109 ----------i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~vwd~~~------~~-~~  162 (444)
                                |++|++.+++...    ....|...+..+.|+|++++|+.++.     +..|++||+.+      +. ..
T Consensus       200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~  279 (710)
T 2xdw_A          200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW  279 (710)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred             cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence                      9999998876321    11224556889999999999988765     57899999976      42 33


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeCCCC--Cee
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDIPDV--ALS  236 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~  236 (444)
                      ..+..+..                  .+.. .|+|+|+.|+..+.    .+.|.+|++. +........+..+..  .+.
T Consensus       280 ~~l~~~~~------------------~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~~~  339 (710)
T 2xdw_A          280 VKLIDNFE------------------GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT-DPEESKWKVLVPEHEKDVLE  339 (710)
T ss_dssp             EEEECSSS------------------SCEE-EEEEETTEEEEEECTTCTTCEEEEEETT-SCCGGGCEEEECCCSSCEEE
T ss_pred             EEeeCCCC------------------cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC-CCCcccceeccCCCCCCeEE
Confidence            44443333                  2333 48888887776554    3469999998 222112344555543  678


Q ss_pred             EEEEccCCCEEEEEcCCCc--EEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE-E---CCCcEEEEEcCCCc
Q psy8152         237 CITTTNQSHYVIVGSTTGD--MMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV-S---LDRHFRVHDFHSKK  308 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~-~---~dg~i~vw~~~~~~  308 (444)
                      .++|++++.++++...++.  |++|++.+ ++.+..+..+.+.|..+.++|++..|+.. +   ..++|++||+.+++
T Consensus       340 ~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          340 WVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            8999988888888888874  66677767 78788888788889999999998765533 2   34789999998876

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.77  E-value=6.7e-17  Score=146.34  Aligned_cols=226  Identities=8%  Similarity=-0.017  Sum_probs=163.8

Q ss_pred             CcEEEEEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccc
Q psy8152         107 GDVKLWRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       107 g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      +.|.+||..+++.+.... .+......++++|+++++++...++.|++|+..... .+..+.....         .+...
T Consensus        69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~---------~g~~~  139 (329)
T 3fvz_A           69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ---------PGSDQ  139 (329)
T ss_dssp             CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB---------CCCST
T ss_pred             CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC---------CCCCc
Confidence            579999998888764332 244578999999999988888889999999986542 3443321110         00000


Q ss_pred             cCccceeEEEEec-CCCEEEEEe-CCceEEEEEcCCCCCccceEEEeC----------CCCCeeEEEEccC-CCEEEEEc
Q psy8152         185 RRPVWVNGISFLP-NSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVDI----------PDVALSCITTTNQ-SHYVIVGS  251 (444)
Q Consensus       185 ~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~  251 (444)
                      .....+..|+++| ++.++++.+ .++.|++|+..    ...+..+..          +-.....|+++|+ ++++++..
T Consensus       140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~  215 (329)
T 3fvz_A          140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR  215 (329)
T ss_dssp             TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred             cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence            1122588999999 788888886 69999999955    444544432          1133789999998 78888888


Q ss_pred             CCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEE-------ECCCcEEEEEcCCCceEEEee----cCCc
Q psy8152         252 TTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSV-------SLDRHFRVHDFHSKKLLRKDY----MQSR  318 (444)
Q Consensus       252 ~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~-------~~dg~i~vw~~~~~~~~~~~~----~~~~  318 (444)
                      .++.|++|+..+ ++.+..+.  .+...+..++|+| +..+++.       .....|++|++.+++++..+.    +...
T Consensus       216 ~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~  293 (329)
T 3fvz_A          216 ENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM  293 (329)
T ss_dssp             TTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS
T ss_pred             CCCEEEEEECCC-CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC
Confidence            899999999998 88888885  4566788999999 4333333       334589999999999988863    4455


Q ss_pred             eeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         319 LTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       319 i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                      +..+++.+         ++.++++...++.|++|++..
T Consensus       294 p~~ia~~~---------dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          294 PHDIVASE---------DGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEEEEECT---------TSEEEEEESSSCCEEEEEEEE
T ss_pred             eeEEEECC---------CCCEEEEECCCCEEEEEeCCc
Confidence            78888764         456788888899999998764

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.77  E-value=4.3e-16  Score=138.85  Aligned_cols=241  Identities=6%  Similarity=-0.079  Sum_probs=166.9

Q ss_pred             CcccceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .+.....+++|+ |+++ +++++..++.|++|+..++  ...+..+.......+++++++++++...++.|.+|+..+++
T Consensus        25 ~~~~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~  101 (296)
T 3e5z_A           25 DGFTWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE  101 (296)
T ss_dssp             CCCSSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred             cCCccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence            455677899999 6887 7778888899999999876  44444322223334456788887777677899999998877


Q ss_pred             ccccccc----cCCCeEEEEEeccCCEEEE----ee-------------CCCeEEEEEcCCceeeeeeecccceeeEeee
Q psy8152         119 DQWTNFN----VGPQLECMKHNKHSNIIAT----GG-------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSV  177 (444)
Q Consensus       119 ~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  177 (444)
                      .......    ....+..++++|+|+++++    |+             ..+.|..++.. ++.. .+.....       
T Consensus       102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~-------  172 (296)
T 3e5z_A          102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDRV-------  172 (296)
T ss_dssp             EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCCS-------
T ss_pred             EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCCC-------
Confidence            5532211    1235678999999998887    33             13456556554 3332 2222222       


Q ss_pred             CCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcE
Q psy8152         178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDM  256 (444)
Q Consensus       178 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  256 (444)
                                 .+..++|+|+++.|++.+.++.|++|++...+.. .....+..+...+..++++++|+++++.  ++.|
T Consensus       173 -----------~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v  239 (296)
T 3e5z_A          173 -----------KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGV  239 (296)
T ss_dssp             -----------SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred             -----------CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeE
Confidence                       4789999999998877788899999998611111 1122233345567789999999876666  7889


Q ss_pred             EEEEcCCCCcceeEeccccCceeEEEe-cCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         257 MAVDLRGKGKPCYKYKGFAGCVKDIAC-PLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       257 ~iwd~~~~~~~~~~~~~h~~~i~~~~~-s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      .+|+..  ++.+..+..+.. +++++| .|+++.|++++.+ .+.-++..+.++
T Consensus       240 ~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~  289 (296)
T 3e5z_A          240 HVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL  289 (296)
T ss_dssp             EEECTT--SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred             EEECCC--CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence            999975  677888877766 899999 5898988888876 455566666554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.77  E-value=3.7e-16  Score=138.54  Aligned_cols=230  Identities=8%  Similarity=0.057  Sum_probs=167.0

Q ss_pred             EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc------ccCCCeEEEEEe-ccCCEEEEeeC-CCeEEEEEcCCceee
Q psy8152          91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF------NVGPQLECMKHN-KHSNIIATGGK-ENDLKLWDLNTTKNI  162 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~-d~~i~vwd~~~~~~~  162 (444)
                      .++++++.++++...++.|++|+.. ++.+..+.      .+...+..+++. +++.++++... ++.|++|+ .+++.+
T Consensus        35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~  112 (286)
T 1q7f_A           35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV  112 (286)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE
T ss_pred             EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE
Confidence            4456788888888889999999987 44443222      233568899995 57766666543 78999999 556665


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEE
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITT  240 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~  240 (444)
                      ..+....                 ...+.+++++|+++++++...++.|++|+..    ...+..+.  .+...+..+++
T Consensus       113 ~~~~~~~-----------------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~p~~i~~  171 (286)
T 1q7f_A          113 RKFGATI-----------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN----GNVLHKFGCSKHLEFPNGVVV  171 (286)
T ss_dssp             EEECTTT-----------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECTTTCSSEEEEEE
T ss_pred             EEecCcc-----------------CCCceEEEEeCCCCEEEEECCCCEEEEEcCC----CCEEEEeCCCCccCCcEEEEE
Confidence            5543211                 1147899999999988888888999999966    34444443  34456889999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc--cCceeEEEecCCCCEEEEEECCC-cEEEEEcCCCceEEEeecC-
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF--AGCVKDIACPLNENLILSVSLDR-HFRVHDFHSKKLLRKDYMQ-  316 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h--~~~i~~~~~s~~~~~l~s~~~dg-~i~vw~~~~~~~~~~~~~~-  316 (444)
                      +|+|+++++...++.|++|+..  ++.+..+..+  ...+..++++++|+++++...++ .|++|+. .++.+..+... 
T Consensus       172 ~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~  248 (286)
T 1q7f_A          172 NDKQEIFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV  248 (286)
T ss_dssp             CSSSEEEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS
T ss_pred             CCCCCEEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC
Confidence            9999988888889999999974  5667666543  35788999999999888887776 9999995 46666655422 


Q ss_pred             --CceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         317 --SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       317 --~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                        ..+.++++.+         ++.++++ +.++.|++|++..
T Consensus       249 ~~~~~~~i~~~~---------~g~l~vs-~~~~~v~v~~~~~  280 (286)
T 1q7f_A          249 KHAQCFDVALMD---------DGSVVLA-SKDYRLYIYRYVQ  280 (286)
T ss_dssp             CCSCEEEEEEET---------TTEEEEE-ETTTEEEEEECSC
T ss_pred             CCCcceeEEECC---------CCcEEEE-CCCCeEEEEEccc
Confidence              2356777764         3566666 5689999998764

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.77  E-value=1.9e-15  Score=145.47  Aligned_cols=281  Identities=12%  Similarity=0.002  Sum_probs=193.7

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--CCccccceeec
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD--FKNFNTNTDVS   84 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~   84 (444)
                      ..+++...++.|.++|..+++. .   ..+.   ....+..+.|+ |++++|++++.++.|.+||+.  +++.+..+.. 
T Consensus       168 ~~~V~~~~~~~V~viD~~t~~v-~---~~i~---~g~~p~~v~~S-pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-  238 (567)
T 1qks_A          168 LFSVTLRDAGQIALIDGSTYEI-K---TVLD---TGYAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-  238 (567)
T ss_dssp             EEEEEETTTTEEEEEETTTCCE-E---EEEE---CSSCEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-
T ss_pred             eEEEEeCCCCeEEEEECCCCeE-E---EEEe---CCCCccceEEC-CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-
Confidence            4566677889999999988874 1   2222   23456789999 799999999999999999995  7777766653 


Q ss_pred             cccccEEEEE----eCCCeEEEEec-CCcEEEEEcCCCCccccccc----------c-----------------------
Q psy8152          85 FGEGDIVGVS----RYDECILTAVK-SGDVKLWRYKTEPDQWTNFN----------V-----------------------  126 (444)
Q Consensus        85 ~~~~~v~~~s----~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~----------~-----------------------  126 (444)
                      +....-.+++    |+|+++++++. .++|.++|..+.+.+..+.-          |                       
T Consensus       239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~  318 (567)
T 1qks_A          239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE  318 (567)
T ss_dssp             CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred             CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence            3333446778    69998877765 58999999887766542110          0                       


Q ss_pred             ----------------------CCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeeeeeec-ccceeeEeeeCCCcc
Q psy8152         127 ----------------------GPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIFSAKN-VSHRVLVYSVKPDEF  182 (444)
Q Consensus       127 ----------------------~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~  182 (444)
                                            .....++.|+|++++|+++. .++.|.++|+.+++.+..+.. ...            
T Consensus       319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~------------  386 (567)
T 1qks_A          319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT------------  386 (567)
T ss_dssp             TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS------------
T ss_pred             CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC------------
Confidence                                  01123557888888876655 578899999998877665543 111            


Q ss_pred             cccCccceeEEE-EecCC-CEEEEEe-CCceEEEEEcCCCCC-----ccceEEEeCCCCCeeEEEEccCCCEEEEEcC--
Q psy8152         183 DLRRPVWVNGIS-FLPNS-DKVAVCS-KQGYVRVYDPKITTQ-----RRPVLKVDIPDVALSCITTTNQSHYVIVGST--  252 (444)
Q Consensus       183 ~~~~~~~i~~~~-~~~~~-~~l~~~~-~d~~i~i~d~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--  252 (444)
                        .++  -..+. ++|++ ..++++. .++.|.++|.. ...     .+.+.++......-..+..+|++++|++...  
T Consensus       387 --Php--g~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~-~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~  461 (567)
T 1qks_A          387 --PHP--GRGANFVHPTFGPVWATSHMGDDSVALIGTD-PEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN  461 (567)
T ss_dssp             --BCC--TTCEEEEETTTEEEEEEEBSSSSEEEEEECC-TTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTC
T ss_pred             --CCC--ccceeeECCCCCcEEEeCCCCCCeEEEecCC-CCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCC
Confidence              011  11222 57875 4444543 46899999988 211     5667777755443355789999999998663  


Q ss_pred             -----CCcEEEEEcCCCC-----c-ceeEec--------cccCceeEEEecCCCCEEEEEE-----CCCcEEEEEcCCCc
Q psy8152         253 -----TGDMMAVDLRGKG-----K-PCYKYK--------GFAGCVKDIACPLNENLILSVS-----LDRHFRVHDFHSKK  308 (444)
Q Consensus       253 -----dg~i~iwd~~~~~-----~-~~~~~~--------~h~~~i~~~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~  308 (444)
                           .++|.++|+.+ .     . .+..+.        .-...+..+.|+|+|+++..+.     .++.|.|+|..+++
T Consensus       462 ~~~~~~~~v~v~d~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~  540 (567)
T 1qks_A          462 PEAEISGSVAVFDIKA-MTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE  540 (567)
T ss_dssp             SSHHHHTCEEEEEGGG-CCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             CCcccCceEEEEECCc-ccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence                 35899999987 5     1 223332        1134688999999998776653     37899999999999


Q ss_pred             eEEEee
Q psy8152         309 LLRKDY  314 (444)
Q Consensus       309 ~~~~~~  314 (444)
                      ++.++.
T Consensus       541 ~~~~i~  546 (567)
T 1qks_A          541 LKHVIK  546 (567)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            987765

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.76  E-value=1.6e-15  Score=137.52  Aligned_cols=255  Identities=8%  Similarity=-0.019  Sum_probs=171.7

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      ..++....++.++.|.   +.    .+..+.  .+...+.+++|+ +++.+++++..++.|++|+..+++......  .+
T Consensus        18 ~~~~~~~~~~~~~~~~---~~----~~~~~~--~~~~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~   85 (333)
T 2dg1_A           18 NSAVPIISESELQTIT---AE----PWLEIS--KKGLQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFV--SH   85 (333)
T ss_dssp             GCSSCCCCGGGSCEEE---CE----EEEEEE--SSCCCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEE--CS
T ss_pred             cceeEEeecccCcccc---cc----eeEEEe--ccCccccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEee--CC
Confidence            4455556777888882   11    122222  456678999999 788877788888999999998877655432  22


Q ss_pred             cccEEEE--EeCCCeEEEEecC----CcEEEEEcCCCCccccc--cccCCCeEEEEEeccCCEEEEeeC------CCeEE
Q psy8152          87 EGDIVGV--SRYDECILTAVKS----GDVKLWRYKTEPDQWTN--FNVGPQLECMKHNKHSNIIATGGK------ENDLK  152 (444)
Q Consensus        87 ~~~v~~~--s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~  152 (444)
                      ...+.++  +++++++++...+    +.|.+|+..++.....+  ..+...+.+++++|+++++++...      .+.|.
T Consensus        86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~  165 (333)
T 2dg1_A           86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY  165 (333)
T ss_dssp             SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred             CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence            3445444  6788877776666    68999998877654212  124567999999999987776653      35566


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceE-----
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVL-----  226 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~-----  226 (444)
                      .++..+++....... ..                  .+..++|+|++++|+ +.+.++.|.+|++..  ....+.     
T Consensus       166 ~~~~~~~~~~~~~~~-~~------------------~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~--~g~~~~~~~~~  224 (333)
T 2dg1_A          166 YVSPDFRTVTPIIQN-IS------------------VANGIALSTDEKVLWVTETTANRLHRIALED--DGVTIQPFGAT  224 (333)
T ss_dssp             EECTTSCCEEEEEEE-ES------------------SEEEEEECTTSSEEEEEEGGGTEEEEEEECT--TSSSEEEEEEE
T ss_pred             EEeCCCCEEEEeecC-CC------------------cccceEECCCCCEEEEEeCCCCeEEEEEecC--CCcCcccccce
Confidence            666654443322211 11                  378899999998554 555678999999961  111111     


Q ss_pred             ---EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC------ceeEEEecCCCCEEEEEECCC
Q psy8152         227 ---KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG------CVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       227 ---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~------~i~~~~~s~~~~~l~s~~~dg  297 (444)
                         .+..+ ..+..++++++|+++++...++.|.+|+. . ++.+..+..+..      .+.+++|+|+++.|+.++.++
T Consensus       225 ~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          225 IPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-R-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             EEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-T-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             EEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-C-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence               11122 35788999999998888777889999998 4 666766654332      688999999987776666553

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.76  E-value=7.1e-16  Score=135.39  Aligned_cols=238  Identities=11%  Similarity=0.057  Sum_probs=180.1

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeecc-ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc-CCCeEE
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSF-GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV-GPQLEC  132 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~v~~  132 (444)
                      ++.|++++.++.|++||.++++.+..+..+. ....-..+.|+|++|+  +.++.|+.||. +++.++.+..+ ...+.+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~   81 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT   81 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence            7899999999999999999999998887533 1334456789999888  45778999999 78888755543 357889


Q ss_pred             EEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152         133 MKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV  211 (444)
Q Consensus       133 ~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  211 (444)
                      +.+.++++++++.+. .+.|..++. .++.+..+.....           . .....+...+++.+++++|++...++.|
T Consensus        82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-----------~-~~~~~~~~~v~~~~~G~~lv~~~~~~~v  148 (276)
T 3no2_A           82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG-----------I-ERPHAQFRQINKNKKGNYLVPLFATSEV  148 (276)
T ss_dssp             EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS-----------C-SSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred             cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC-----------C-CcccccccCceECCCCCEEEEecCCCEE
Confidence            999999999999887 778888875 5777766543211           0 0001135566789999999999999999


Q ss_pred             EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc------CceeEEEecC
Q psy8152         212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA------GCVKDIACPL  285 (444)
Q Consensus       212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~------~~i~~~~~s~  285 (444)
                      ..||..    ++.+.++... ..+.++.+.++++++++++.++.|..+|..+ ++.+.++..+.      ..+..++..+
T Consensus       149 ~~~d~~----G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t-G~~~w~~~~~~~~~~~l~~~~~~~~~~  222 (276)
T 3no2_A          149 REIAPN----GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES-NRIVRRVNANDIEGVQLFFVAQLFPLQ  222 (276)
T ss_dssp             EEECTT----SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT-CCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred             EEECCC----CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC-CcEEEEecCCCCCCccccccccceEcC
Confidence            999976    6677777754 3456788889999999988888999999999 99999986432      2378888899


Q ss_pred             CCCEEEEEECC--------CcEEEEEc-CCCceEEEee
Q psy8152         286 NENLILSVSLD--------RHFRVHDF-HSKKLLRKDY  314 (444)
Q Consensus       286 ~~~~l~s~~~d--------g~i~vw~~-~~~~~~~~~~  314 (444)
                      +|+++++....        +..+++.+ .+++++..+.
T Consensus       223 ~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~  260 (276)
T 3no2_A          223 NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN  260 (276)
T ss_dssp             TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred             CCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence            99988887421        24467777 4677776654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.76  E-value=3.3e-16  Score=137.59  Aligned_cols=242  Identities=6%  Similarity=-0.081  Sum_probs=165.5

Q ss_pred             ceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152          44 SVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT  122 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~  122 (444)
                      ...+++++ +++.+++ +...++.|.+|+..+...............-.++.++++++++.. ++.|.+|+.........
T Consensus        25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~  102 (270)
T 1rwi_B           25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL  102 (270)
T ss_dssp             CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred             CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence            77899999 6888666 446779999999765543322111111233355677788666555 88999999876554422


Q ss_pred             ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152         123 NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV  202 (444)
Q Consensus       123 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  202 (444)
                      .......+..+++.++++++++...++.|.+|+..+............                  .+.+++++|+++++
T Consensus       103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------------------~p~~i~~~~~g~l~  164 (270)
T 1rwi_B          103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN------------------DPDGVAVDNSGNVY  164 (270)
T ss_dssp             CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC------------------SCCCEEECTTCCEE
T ss_pred             ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCC------------------CceeEEEeCCCCEE
Confidence            223336789999999998888777788999997655433221111111                  47789999999987


Q ss_pred             EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152         203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA  282 (444)
Q Consensus       203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~  282 (444)
                      ++...++.|.+|+..   ..........+...+..++++++|.++++...++.|.+|+... .........+...+.+++
T Consensus       165 v~~~~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~  240 (270)
T 1rwi_B          165 VTDTDNNRVVKLEAE---SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVA  240 (270)
T ss_dssp             EEEGGGTEEEEECTT---TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEE
T ss_pred             EEECCCCEEEEEecC---CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEE
Confidence            777778899999988   3332222222335678999999998888887888999999875 433322223345789999


Q ss_pred             ecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152         283 CPLNENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                      ++++|+++++...++.|++|++...+.
T Consensus       241 ~~~~g~l~v~~~~~~~v~~~~~~~~~~  267 (270)
T 1rwi_B          241 VDSDRTVYVADRGNDRVVKLTSLEHHH  267 (270)
T ss_dssp             ECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred             ECCCCCEEEEECCCCEEEEEcCCCccc
Confidence            999999888888999999999876554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.76  E-value=2.4e-16  Score=157.45  Aligned_cols=247  Identities=10%  Similarity=-0.018  Sum_probs=168.1

Q ss_pred             CcccceEEEeeeccCCcEEEE-----EEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152          40 TNKASVLALNWGNVEESELLI-----AYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------  108 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~-----~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------  108 (444)
                      +|...+.+++|| |++++||.     |+.+..|++||+.+++.+.............+++|+|+.|+.++.+..      
T Consensus       118 ~~~~~~~~~~~S-PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~  196 (695)
T 2bkl_A          118 DGTVSLGTWAVS-WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD  196 (695)
T ss_dssp             SSCEEEEEEEEC-TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred             CCCEEEEEEEEC-CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence            566789999999 79999984     333468999999998876211112222245678999999999988766      


Q ss_pred             -------EEEEEcCCCCcc----ccccccCCCeEEEEEeccCCEEEEeeCCC----eEEEEEcCCceeeeeeecccceee
Q psy8152         109 -------VKLWRYKTEPDQ----WTNFNVGPQLECMKHNKHSNIIATGGKEN----DLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus       109 -------i~iw~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                             |++|++.+++..    .....+...+..+.|+|+|++|+.++.++    .|.+|+..+++. ..+..+..   
T Consensus       197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~---  272 (695)
T 2bkl_A          197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVG---  272 (695)
T ss_dssp             GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSS---
T ss_pred             cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCC---
Confidence                   999999887632    12223456789999999999998887666    677776554433 23333322   


Q ss_pred             EeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCCEEE
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSHYVI  248 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~  248 (444)
                                     .+....+ +++.+++.+.   .++.|.+|++. +........+..+  ...+..++|+ ++.+++
T Consensus       273 ---------------~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~  334 (695)
T 2bkl_A          273 ---------------AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA-KPARASWKEIVPEDSSASLLSVSIV-GGHLSL  334 (695)
T ss_dssp             ---------------CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT-BCSGGGCEEEECCCSSCEEEEEEEE-TTEEEE
T ss_pred             ---------------ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC-CCCccCCeEEecCCCCCeEEEEEEE-CCEEEE
Confidence                           3555556 5566444443   25899999997 2221112333333  4457888888 677888


Q ss_pred             EEcCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEEE----CCCcEEEEEcCCCce
Q psy8152         249 VGSTTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSVS----LDRHFRVHDFHSKKL  309 (444)
Q Consensus       249 ~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~~----~dg~i~vw~~~~~~~  309 (444)
                      +...++..+||.+...++.+..+..+ .+.|..++++|+++.|+...    ..++|++||+.+++.
T Consensus       335 ~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          335 EYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             EEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             EEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            88899988888665215666666654 66788889999987666332    347899999988764

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.75  E-value=2.3e-15  Score=136.05  Aligned_cols=294  Identities=11%  Similarity=0.086  Sum_probs=202.6

Q ss_pred             CCCcccEEEecC-----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeE
Q psy8152           3 LADDYNIYIGSS-----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKI   67 (444)
Q Consensus         3 ~~~~~~l~~g~~-----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i   67 (444)
                      .++.+.+++...     ++.|.++|..+.+. .   ..+.. + ..+  .++++ |++++|+++.          .++.|
T Consensus        41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-~---~~I~v-G-~~P--~va~s-pDG~~lyVan~~~~r~~~G~~~~~V  111 (386)
T 3sjl_D           41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRV-I---GMIDG-G-FLP--NPVVA-DDGSFIAHASTVFSRIARGERTDYV  111 (386)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEE-E---EEEEE-C-SSC--EEEEC-TTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred             CCCCCEEEEEcCcccCCCCEEEEEECCCCeE-E---EEEEC-C-CCC--cEEEC-CCCCEEEEEcccccccccCCCCCEE
Confidence            456677777765     68999999988875 2   22221 1 223  49999 7999888775          35789


Q ss_pred             EEEeCCCCccccceeecc-------ccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEec-
Q psy8152          68 KIYDTDFKNFNTNTDVSF-------GEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-  137 (444)
Q Consensus        68 ~vw~~~~~~~~~~~~~~~-------~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-  137 (444)
                      .+||..+++.+..+....       ....-..++|+|++++++..  ++.|.++|+.+++.+..+ .-.+   |..+.| 
T Consensus       112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI-~v~g---~~~~~P~  187 (386)
T 3sjl_D          112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DVPD---CYHIFPT  187 (386)
T ss_dssp             EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-ECCS---EEEEEEE
T ss_pred             EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE-ECCC---cceeecC
Confidence            999999999988876532       13445788999999888864  689999999999887643 2222   222334 


Q ss_pred             cCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccce-eEEEEe-cCCCEEEEEeCCceEEEE
Q psy8152         138 HSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV-NGISFL-PNSDKVAVCSKQGYVRVY  214 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~~~l~~~~~d~~i~i~  214 (444)
                      ....+++.+.||.+.+.++.. ++.......        -+.++.      .++ ....|. ++|++++ .+.+|.|++.
T Consensus       188 g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~--------~~~~~~------~~~~~~~~~~~~dG~~~~-vs~~g~V~v~  252 (386)
T 3sjl_D          188 APDTFFMHCRDGSLAKVAFGTEGTPEITHTE--------VFHPED------EFLINHPAYSQKAGRLVW-PTYTGKIHQI  252 (386)
T ss_dssp             ETTEEEEEETTSCEEEEECCSSSCCEEEECC--------CCSCTT------SCBCSCCEEETTTTEEEE-EBTTSEEEEE
T ss_pred             CCceeEEECCCCCEEEEECCCCCeEEEeecc--------eecccc------ccccccceeEcCCCcEEE-EeCCCEEEEE
Confidence            556777888899999999976 554321110        011110      012 123564 5665444 5568999999


Q ss_pred             EcCCCCCccceEEEeC----------CCCCeeEEEEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccc
Q psy8152         215 DPKITTQRRPVLKVDI----------PDVALSCITTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      |+. +.....+..+..          ....+..++++|+++.|++...          .+.|.++|+.+ ++.+.++.. 
T Consensus       253 d~~-~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-  329 (386)
T 3sjl_D          253 DLS-SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-  329 (386)
T ss_dssp             ECT-TSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-
T ss_pred             ECC-CCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-
Confidence            997 222222322220          0123445788999888887642          25799999999 999998873 


Q ss_pred             cCceeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         275 AGCVKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       275 ~~~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      ...+.+|+++++++ +|+++. .++.|.++|..+++.+.++...+..+.++++.+
T Consensus       330 g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d  384 (386)
T 3sjl_D          330 GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD  384 (386)
T ss_dssp             EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred             CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence            23678999999996 666654 589999999999999999988887788877655

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.75  E-value=4.8e-16  Score=141.04  Aligned_cols=260  Identities=10%  Similarity=0.026  Sum_probs=175.3

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ...|.+++|+ ++...++..+.++.++.|   .++....+........-.++++++++++++..++.|.+|+..+++...
T Consensus         5 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~   80 (333)
T 2dg1_A            5 QQDLPTLFYS-GKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR   80 (333)
T ss_dssp             -CCCCBCCSC-GGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred             ccccceeeec-CCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence            3457888999 677777777778889999   233333332111122234456788888888889999999998887664


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCC----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKE----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      ....+...+.+++++|+++++++...+    +.|.+||..++.....+.....                ...+.+++++|
T Consensus        81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------------~~~~~~i~~d~  144 (333)
T 2dg1_A           81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST----------------AYCIDDMVFDS  144 (333)
T ss_dssp             EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS----------------CCCEEEEEECT
T ss_pred             EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc----------------CCcccceEECC
Confidence            333566789999999999888877666    6899999887654322221111                12588999999


Q ss_pred             CCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeE
Q psy8152         198 NSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       198 ~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      +++++++...      .+.|..|+..   ... +..+......+..++|+|++++|+ +.+.++.|++|++...+..+..
T Consensus       145 ~g~l~v~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~  220 (333)
T 2dg1_A          145 KGGFYFTDFRGYSTNPLGGVYYVSPD---FRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP  220 (333)
T ss_dssp             TSCEEEEECCCBTTBCCEEEEEECTT---SCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE
T ss_pred             CCCEEEEeccccccCCCceEEEEeCC---CCE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc
Confidence            9988776654      3556666655   222 222222233478899999998654 4566789999999641333322


Q ss_pred             --------eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC-------ceeEEEEcCC
Q psy8152         271 --------YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS-------RLTSILVRSD  327 (444)
Q Consensus       271 --------~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~-------~i~~~~~~~~  327 (444)
                              +.++ ..+..++++++|+++++...++.|.+|+. .++.+..+....       .+.+++|.++
T Consensus       221 ~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~d  290 (333)
T 2dg1_A          221 FGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPG  290 (333)
T ss_dssp             EEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred             ccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCC
Confidence                    1222 46788999999998888888899999998 466666655332       5788888644

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.74  E-value=1.7e-15  Score=136.86  Aligned_cols=267  Identities=7%  Similarity=-0.036  Sum_probs=184.1

Q ss_pred             cCCeEEEEeCCCCccccceeec----cccccEEEEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec
Q psy8152          63 SGQKIKIYDTDFKNFNTNTDVS----FGEGDIVGVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK  137 (444)
Q Consensus        63 ~d~~i~vw~~~~~~~~~~~~~~----~~~~~v~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  137 (444)
                      .++.|.+||..+++....+...    ........+..++. ++++...++.|.+||..+++.+..+ ........+++++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~~~~p~~i~~~~   93 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI-TGFTSPRYIHFLS   93 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE-ECCSSEEEEEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc-CCCCCCcEEEEeC
Confidence            3789999999998876644210    11123445544454 4555556799999999999987644 4556789999998


Q ss_pred             cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEc
Q psy8152         138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDP  216 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~  216 (444)
                      +++++++...++.|.+||+.+++....+.....             .........+++ ..++++++.. .++.|.+||+
T Consensus        94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-------------~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~  159 (328)
T 3dsm_A           94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-------------DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT  159 (328)
T ss_dssp             TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-------------CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred             CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-------------cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence            885444444789999999999887766654330             000002456777 4444444443 4889999999


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC----------CcEEEEEcCCCCcceeEeccc-cCceeEEEecC
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT----------GDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPL  285 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~  285 (444)
                      .   ..+.+..+.... ....++++|+|++++++..+          +.|.+||..+ ++.+..+... ......++|+|
T Consensus       160 ~---t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~  234 (328)
T 3dsm_A          160 E---TDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNG  234 (328)
T ss_dssp             T---TTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECT
T ss_pred             C---CCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEec
Confidence            8   666666666543 35789999999877776554          7899999998 8877776532 23678999999


Q ss_pred             CCCEEEEEECCCcEEEEEcCCCceEEEee--c-CCceeEEEEcCCCcccccchhhhhcccc----ccCCCccccCCCccc
Q psy8152         286 NENLILSVSLDRHFRVHDFHSKKLLRKDY--M-QSRLTSILVRSDFSLENETKKEEQEHSE----EKGDSDEKYDPEHFE  358 (444)
Q Consensus       286 ~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~----~~d~~i~~W~~~~~~  358 (444)
                      ++++|+++..  .|.+||..++++.....  . ......+++.++        .+.+.++.    ..++.|.+|+.. ++
T Consensus       235 d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~--------~g~lyva~~~~y~~~~~V~v~d~~-g~  303 (328)
T 3dsm_A          235 TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN--------NGEVYVADAIDYQQQGIVYRYSPQ-GK  303 (328)
T ss_dssp             TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT--------TCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred             CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCC--------CCeEEEEcccccccCCEEEEECCC-CC
Confidence            9998888755  89999999887643221  1 355778887753        23455555    568899999988 54


Q ss_pred             cc
Q psy8152         359 MN  360 (444)
Q Consensus       359 ~~  360 (444)
                      ..
T Consensus       304 ~~  305 (328)
T 3dsm_A          304 LI  305 (328)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.74  E-value=4.6e-14  Score=129.27  Aligned_cols=291  Identities=10%  Similarity=-0.030  Sum_probs=192.1

Q ss_pred             CCCcccEEEecC--CC---cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeE
Q psy8152           3 LADDYNIYIGSS--TG---AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKI   67 (444)
Q Consensus         3 ~~~~~~l~~g~~--dg---~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i   67 (444)
                      +.+++++++...  ..   .|.+||..+++.    +..+.. + ..+  .++|+ |++++|+++.          .++.|
T Consensus        29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~----~~~i~~-g-~~p--~i~~s-pDg~~lyv~n~~~~~~~rg~~~~~v   99 (373)
T 2mad_H           29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSI----LGHVNG-G-FLP--NPVAA-HSGSEFALASTSFSRIAKGKRTDYV   99 (373)
T ss_pred             CCCCCEEEEeCCcccCCccEEEEEECCCCeE----EEEecC-C-CCC--CeEEC-CCCCEEEEEeccccccccCCCCCeE
Confidence            345567777764  33   789999988774    122221 1 222  99999 7999999886          36789


Q ss_pred             EEEeCCCCccccceeec-------cccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEecc
Q psy8152          68 KIYDTDFKNFNTNTDVS-------FGEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH  138 (444)
Q Consensus        68 ~vw~~~~~~~~~~~~~~-------~~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  138 (444)
                      .+||..+.+.+..+...       +....-..++|+|++|+++..  ++.|.++| .+++.+..+.....   |+.+.|.
T Consensus       100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~~~~~~~  175 (373)
T 2mad_H          100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---CYHIHPG  175 (373)
T ss_pred             EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---eEEEEeC
Confidence            99999988887776543       112334678999999998874  47899999 98887653133332   3455564


Q ss_pred             C-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         139 S-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       139 ~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      + ..+++.+.||.+.+++. +++.+........  .   ..+      .+ ......+.+++..++..+..+.+.+.|+.
T Consensus       176 ~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~--~---~~~------~p-~~~~~~~~~~~~~~~~~~~~~~v~vid~~  242 (373)
T 2mad_H          176 APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM--L---TAA------QN-LLTQPAQANKSGRIVWPVYSGKILQADIS  242 (373)
T ss_pred             CCceEEEEcCCCCEEEEEC-CCcEEEEEecccc--c---cCC------cc-eeecceeEecCCEEEEEcCCceEEEEecc
Confidence            3 45667778999999999 7766533211000  0   000      00 12335567776555544577899999987


Q ss_pred             CCCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccccCc
Q psy8152         218 ITTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGFAGC  277 (444)
Q Consensus       218 ~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h~~~  277 (444)
                       ......+..+...          ......++++|+++.|+++..          .+.|.++|+.+ ++.+.++.. ...
T Consensus       243 -~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~  319 (373)
T 2mad_H          243 -AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHD  319 (373)
T ss_pred             -CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCC
Confidence             2222222222210          122344789999888887543          35799999999 999888863 335


Q ss_pred             eeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEe-ecCCceeEE
Q psy8152         278 VKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKD-YMQSRLTSI  322 (444)
Q Consensus       278 i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~-~~~~~i~~~  322 (444)
                      ..+++|+|+|+ +++++. .++.|.+||+.+++.+.++ ........+
T Consensus       320 p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~  367 (373)
T 2mad_H          320 VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVL  367 (373)
T ss_pred             cCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEE
Confidence            78999999999 777777 5899999999999998884 444443333

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.73  E-value=2.1e-15  Score=151.03  Aligned_cols=275  Identities=13%  Similarity=0.090  Sum_probs=179.1

Q ss_pred             cCCcEEEEEEcC-----CeEEEEeCCCCccccceee----ccccccE--EEEEeCCCeEEEEecCC-----cEEEEEcCC
Q psy8152          53 VEESELLIAYSG-----QKIKIYDTDFKNFNTNTDV----SFGEGDI--VGVSRYDECILTAVKSG-----DVKLWRYKT  116 (444)
Q Consensus        53 ~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~----~~~~~~v--~~~s~~~~~l~~~~~dg-----~i~iw~~~~  116 (444)
                      |++.+++....+     +.+.+.+...++....+..    .++...+  .++||+|++|+.+...+     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            577777765433     2344444444443222211    1222223  45689999988776543     899999999


Q ss_pred             CCccccccccCCCeEEEEEeccCCEEEEeeCCCe----------------EEEEEcCCcee--eeeeecccceeeEeeeC
Q psy8152         117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKEND----------------LKLWDLNTTKN--IFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~~  178 (444)
                      ++.......+ ..+..++|+|+++.|+.++.++.                |++|++.+++.  ...+.....        
T Consensus       161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~--------  231 (710)
T 2xdw_A          161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE--------  231 (710)
T ss_dssp             TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC--------
T ss_pred             CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC--------
Confidence            9876532322 23678999999999999887765                99999987652  111121111        


Q ss_pred             CCcccccCccceeEEEEecCCCEEEEEeC-----CceEEEEEcCCCCC------cc-ceEEEeCCCCCeeEEEEccCCCE
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSDKVAVCSK-----QGYVRVYDPKITTQ------RR-PVLKVDIPDVALSCITTTNQSHY  246 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~  246 (444)
                              ...+..+.|+|+|++|+.++.     +..|++||+.   .      .. ....+..+...+.. .|+|+|..
T Consensus       232 --------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~---~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~  299 (710)
T 2xdw_A          232 --------PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ---QESNGITGILKWVKLIDNFEGEYD-YVTNEGTV  299 (710)
T ss_dssp             --------TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG---GSSSSSCSSCCCEEEECSSSSCEE-EEEEETTE
T ss_pred             --------CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc---ccccccCCccceEEeeCCCCcEEE-EEeccCCE
Confidence                    125788999999998887764     6789999998   2      21 35556666555554 58888888


Q ss_pred             EEEEcCC----CcEEEEEcCCCCc--ceeEeccccC--ceeEEEecCCCCEEEEEECCCc--EEEEEcCCCceEEEee-c
Q psy8152         247 VIVGSTT----GDMMAVDLRGKGK--PCYKYKGFAG--CVKDIACPLNENLILSVSLDRH--FRVHDFHSKKLLRKDY-M  315 (444)
Q Consensus       247 l~~~~~d----g~i~iwd~~~~~~--~~~~~~~h~~--~i~~~~~s~~~~~l~s~~~dg~--i~vw~~~~~~~~~~~~-~  315 (444)
                      |+..+..    +.|.+|++.+ +.  ....+..|..  .+..++|++++.++++...++.  |++|++.+++.+..+. +
T Consensus       300 l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~  378 (710)
T 2xdw_A          300 FTFKTNRHSPNYRLINIDFTD-PEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE  378 (710)
T ss_dssp             EEEEECTTCTTCEEEEEETTS-CCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC
T ss_pred             EEEEECCCCCCCEEEEEeCCC-CCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC
Confidence            7765543    3699999987 54  2355555544  6888999887788888888885  5667776777666654 4


Q ss_pred             CCceeEEEEcCCCcccccchhhhhcc----ccccCCCccccCCCccc
Q psy8152         316 QSRLTSILVRSDFSLENETKKEEQEH----SEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       316 ~~~i~~~~~~~~~~~~~~~~~~~~~~----s~~~d~~i~~W~~~~~~  358 (444)
                      .+.+..+.++++         +..++    +....+++.+|++.+++
T Consensus       379 ~~~v~~~~~s~d---------~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          379 VGSVVGYSGQKK---------DTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             SSEEEEEECCTT---------CSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CceEEEEecCCC---------CCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            445666665543         22232    33455778889887665

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.72  E-value=3.3e-15  Score=133.07  Aligned_cols=212  Identities=9%  Similarity=0.011  Sum_probs=151.4

Q ss_pred             EEEEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152          90 IVGVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV  168 (444)
Q Consensus        90 v~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~  168 (444)
                      -..++|+++ +++++..++.|..|+..++  ...+..+...+.+++++|+++++++...++.|.+|+..+++........
T Consensus        32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~  109 (296)
T 3e5z_A           32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF  109 (296)
T ss_dssp             EEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE
T ss_pred             CCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc
Confidence            456678888 7888888999999999877  3345556778999999999998888777789999999777654332211


Q ss_pred             cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE----eC-------------CceEEEEEcCCCCCccceEEEeCC
Q psy8152         169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC----SK-------------QGYVRVYDPKITTQRRPVLKVDIP  231 (444)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~-------------d~~i~i~d~~~~~~~~~~~~~~~~  231 (444)
                      ..              .....++.++++|+|+++++.    +.             .+.|..++..     ..+..+..+
T Consensus       110 ~~--------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-----g~~~~~~~~  170 (296)
T 3e5z_A          110 EG--------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-----GTLSAPIRD  170 (296)
T ss_dssp             TT--------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-----SCEEEEECC
T ss_pred             CC--------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-----CCEEEeecC
Confidence            11              001136789999999988873    21             2344444432     223344556


Q ss_pred             CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc---eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP---CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      ......++|+|++++|++.+.++.|++|++...+..   ...+..+...+.+++++++|+++++.  ++.|.+|+.. ++
T Consensus       171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~  247 (296)
T 3e5z_A          171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD  247 (296)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC
T ss_pred             CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC
Confidence            666789999999999888888899999999731544   23333345567889999999876665  8899999986 77


Q ss_pred             eEEEeecCCceeEEEEc
Q psy8152         309 LLRKDYMQSRLTSILVR  325 (444)
Q Consensus       309 ~~~~~~~~~~i~~~~~~  325 (444)
                      .+..+.....+.+++|.
T Consensus       248 ~~~~~~~~~~~~~~~f~  264 (296)
T 3e5z_A          248 ELGRVLTPQTTSNLCFG  264 (296)
T ss_dssp             EEEEEECSSCCCEEEEE
T ss_pred             EEEEEECCCCceeEEEE
Confidence            77766644348888885

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.72  E-value=3.9e-14  Score=126.11  Aligned_cols=265  Identities=9%  Similarity=-0.001  Sum_probs=176.3

Q ss_pred             cEEEec-CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           8 NIYIGS-STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         8 ~l~~g~-~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      .|+++. .++.|.+|+.. ++.     ..+....+...+.++++. +++..+++...++.|..|+.. ++. ..+..+..
T Consensus        27 ~l~v~~~~~~~v~~~d~~-~~~-----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~   97 (299)
T 2z2n_A           27 KVWITQHKANMISCINLD-GKI-----TEYPLPTPDAKVMCLTIS-SDGEVWFTENAANKIGRITKK-GII-KEYTLPNP   97 (299)
T ss_dssp             CEEEEETTTTEEEEECTT-CCE-----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCE-EEEECSST
T ss_pred             CEEEEecCCCcEEEEcCC-CCe-----EEecCCcccCceeeEEEC-CCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCc
Confidence            344444 47889999877 542     222211345778999999 688877776667899999976 433 22322222


Q ss_pred             cccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          87 EGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        87 ~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      ...+.++  .+++.++++...++.|.+|+. +++.... .......+.++++.++++++++....+.|..|+. +++...
T Consensus        98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~  175 (299)
T 2z2n_A           98 DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE  175 (299)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred             CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE
Confidence            3344444  567777777767889999998 5544421 2224567899999999988887777789999998 555432


Q ss_pred             e-eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         164 S-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       164 ~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      . +....                  ..+.++++.++++++++....+.|.+|+..   .......+..+...+.++++++
T Consensus       176 ~~~~~~~------------------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~~~  234 (299)
T 2z2n_A          176 FKIPTPA------------------SGPVGITKGNDDALWFVEIIGNKIGRITTS---GEITEFKIPTPNARPHAITAGA  234 (299)
T ss_dssp             EECSSTT------------------CCEEEEEECTTSSEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECS
T ss_pred             eeCCCCC------------------CcceeEEECCCCCEEEEccCCceEEEECCC---CcEEEEECCCCCCCceeEEECC
Confidence            1 11111                  147899999999877777778899999985   2222222333456788999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCccee-EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPCY-KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      +|+++++...++.|.+|+. . +.... .+..+...+.++++ +++.++++.. .+.|..++..+++
T Consensus       235 ~g~l~v~~~~~~~i~~~d~-~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          235 GIDLWFTEWGANKIGRLTS-N-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             TTCEEEEETTTTEEEEEET-T-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred             CCCEEEeccCCceEEEECC-C-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence            9987777767889999998 4 44322 23345567899999 8888766654 5677777776543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.72  E-value=7.2e-14  Score=124.37  Aligned_cols=255  Identities=9%  Similarity=-0.030  Sum_probs=174.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .+...+.++++. +++..+++...++.|.+|+.. ++.. .+....+...+.++  .+++.++++...++.|..|+.. +
T Consensus        12 ~~~~~~~~i~~d-~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g   87 (299)
T 2z2n_A           12 NQDTGPYGITVS-DKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G   87 (299)
T ss_dssp             SSSCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             CcCCCccceEEC-CCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence            445788999999 788877766667899999987 5543 22222223445444  5677777776668889999976 3


Q ss_pred             Cccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         118 PDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       118 ~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +..... ......+.++++.+++.++++...++.|.+|+. +++.... ......                  .+.++++
T Consensus        88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~------------------~~~~i~~  148 (299)
T 2z2n_A           88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGS------------------YPSFITL  148 (299)
T ss_dssp             CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC------------------CEEEEEE
T ss_pred             cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCC------------------CCceEEE
Confidence            332111 124557899999999988887777889999998 4443221 111111                  4889999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE-eccc
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGF  274 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~h  274 (444)
                      .++++++++....+.|..|+..   .......+......+..++++++++++++....+.|.+|+. + ++.... +..+
T Consensus       149 ~~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~  223 (299)
T 2z2n_A          149 GSDNALWFTENQNNAIGRITES---GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S-GEITEFKIPTP  223 (299)
T ss_dssp             CTTSCEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T-CCEEEEECSST
T ss_pred             cCCCCEEEEeCCCCEEEEEcCC---CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C-CcEEEEECCCC
Confidence            9999888877778899999875   22111223334456789999999998777777889999998 6 554322 3334


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---cCCceeEEEE
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---MQSRLTSILV  324 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---~~~~i~~~~~  324 (444)
                      ...+.+++++++|+++++...++.|.+|+. +++. ..+.   ....+.++++
T Consensus       224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~  274 (299)
T 2z2n_A          224 NARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF  274 (299)
T ss_dssp             TCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE
T ss_pred             CCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe
Confidence            567899999999987776667889999998 4543 2332   2345677776

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.71  E-value=6.1e-15  Score=129.40  Aligned_cols=236  Identities=11%  Similarity=0.045  Sum_probs=173.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcc-cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNK-ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      .++++|++++.++.|++|+..+++..    ..+.  .+. ..+.++.++ |++++|+  +.++.|+.||. +++.+..+.
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~tG~~~----w~~~--~~~~~~~~~~~~~-pdG~ilv--s~~~~V~~~d~-~G~~~W~~~   72 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDTKEIV----WEYP--LEKGWECNSVAAT-KAGEILF--SYSKGAKMITR-DGRELWNIA   72 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTTTEEE----EEEE--CCTTCCCCEEEEC-TTSCEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred             CCCcEEEeeCCCCEEEEEECCCCeEE----EEeC--CCccCCCcCeEEC-CCCCEEE--eCCCCEEEECC-CCCEEEEEc
Confidence            45689999999999999999888741    2222  233 468899999 7898888  44688999999 799888876


Q ss_pred             eccccccEE--EEEeCCCeEEEEec-CCcEEEEEcCCCCcccccc------ccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152          83 VSFGEGDIV--GVSRYDECILTAVK-SGDVKLWRYKTEPDQWTNF------NVGPQLECMKHNKHSNIIATGGKENDLKL  153 (444)
Q Consensus        83 ~~~~~~~v~--~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  153 (444)
                      .. ....+.  .+.++|+++++.+. .+.|..++. +++.++.+.      .+......+++.++++++++...++.|..
T Consensus        73 ~~-~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~  150 (276)
T 3no2_A           73 AP-AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE  150 (276)
T ss_dssp             CC-TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred             CC-CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE
Confidence            42 122343  44678999998877 777877775 566554222      12224556678889999999999999999


Q ss_pred             EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-
Q psy8152         154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-  232 (444)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-  232 (444)
                      ||.. ++.+.++.....                   +.++.+.+++++++++..+++|..+|..   +++.+.++..+. 
T Consensus       151 ~d~~-G~~~w~~~~~~~-------------------~~~~~~~~~g~~~v~~~~~~~v~~~d~~---tG~~~w~~~~~~~  207 (276)
T 3no2_A          151 IAPN-GQLLNSVKLSGT-------------------PFSSAFLDNGDCLVACGDAHCFVQLNLE---SNRIVRRVNANDI  207 (276)
T ss_dssp             ECTT-SCEEEEEECSSC-------------------CCEEEECTTSCEEEECBTTSEEEEECTT---TCCEEEEEEGGGS
T ss_pred             ECCC-CCEEEEEECCCC-------------------ccceeEcCCCCEEEEeCCCCeEEEEeCc---CCcEEEEecCCCC
Confidence            9998 999988876433                   6677888999999999989999999988   788888876332 


Q ss_pred             -----CCeeEEEEccCCCEEEEEc--CC------CcEEEEEcCCCCcceeEeccc
Q psy8152         233 -----VALSCITTTNQSHYVIVGS--TT------GDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       233 -----~~i~~~~~~~~~~~l~~~~--~d------g~i~iwd~~~~~~~~~~~~~h  274 (444)
                           ..+..++..++|+++++.+  ..      +..+++.+...++.+.++..+
T Consensus       208 ~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~  262 (276)
T 3no2_A          208 EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK  262 (276)
T ss_dssp             BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCT
T ss_pred             CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCc
Confidence                 2367888889999888763  21      234566663327888777643

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.69  E-value=5.9e-15  Score=129.52  Aligned_cols=236  Identities=8%  Similarity=-0.048  Sum_probs=161.9

Q ss_pred             EEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152          91 VGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus        91 ~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      .++++++++++ +...++.|.+|+..+.........+...+.++++.++++++++.. ++.|.+|+....... .+....
T Consensus        29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~  106 (270)
T 1rwi_B           29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDG  106 (270)
T ss_dssp             EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCS
T ss_pred             eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCC
Confidence            44567888666 446788999999766554322233445688999999988666655 889999998764432 221111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                                       ...+.++++.|+++++++...++.|.+|+..   ..............+..++++|+|+++++
T Consensus       107 -----------------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~  166 (270)
T 1rwi_B          107 -----------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAG---SKTQTVLPFTGLNDPDGVAVDNSGNVYVT  166 (270)
T ss_dssp             -----------------CSSEEEEEECTTCCEEEEEGGGTEEEEECTT---CCSCEECCCCSCCSCCCEEECTTCCEEEE
T ss_pred             -----------------cCCCcceEECCCCCEEEEECCCCEEEEEECC---CceeEeeccccCCCceeEEEeCCCCEEEE
Confidence                             0148899999999988887778899999765   33332222223345789999999998877


Q ss_pred             EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCC
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDF  328 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~  328 (444)
                      ...++.|.+|+... .........+...+.+++++++|.++++...++.|.+|+........... ....+.++++.+  
T Consensus       167 ~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~--  243 (270)
T 1rwi_B          167 DTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS--  243 (270)
T ss_dssp             EGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT--
T ss_pred             ECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC--
Confidence            77788999999876 55443333334678899999999877777778899999987655433222 224577887764  


Q ss_pred             cccccchhhhhccccccCCCccccCCCccc
Q psy8152         329 SLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                             ++.+.++...++.|++++....+
T Consensus       244 -------~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          244 -------DRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             -------TCCEEEEEGGGTEEEEECCCGGG
T ss_pred             -------CCCEEEEECCCCEEEEEcCCCcc
Confidence                   35677788889999999887544

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.69  E-value=2.4e-14  Score=131.87  Aligned_cols=284  Identities=10%  Similarity=0.014  Sum_probs=192.9

Q ss_pred             CCCCcccEEEecCC-----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCe
Q psy8152           2 TLADDYNIYIGSST-----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQK   66 (444)
Q Consensus         2 s~~~~~~l~~g~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~   66 (444)
                      .+.+...+++....     +.|.++|..+.+. .   ..+.. + ..+  .++++ |++++|+++.          .++.
T Consensus        80 p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~v-v---~~I~v-G-~~P--gia~S-pDgk~lyVan~~~~~~~~G~~~~~  150 (426)
T 3c75_H           80 PAPDARRVYIQDPAHFAAITQQFVIDGSTGRI-L---GMTDG-G-FLP--HPVAA-EDGSFFAQASTVFERIARGKRTDY  150 (426)
T ss_dssp             CCCCTTEEEEEECTTTCSSEEEEEEETTTTEE-E---EEEEE-C-SSC--EEEEC-TTSSCEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCCCEEEEECCCcCCCCCeEEEEECCCCEE-E---EEEEC-C-CCC--ceEEC-CCCCEEEEEeccccccccCCCCCE
Confidence            44566667776553     6999999988875 2   22222 2 223  89999 7999888876          3678


Q ss_pred             EEEEeCCCCccccceeec-------cccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEec
Q psy8152          67 IKIYDTDFKNFNTNTDVS-------FGEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK  137 (444)
Q Consensus        67 i~vw~~~~~~~~~~~~~~-------~~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  137 (444)
                      |.++|..+++.+..+...       +....-..++|+|++|+++..  ++.|.+.|+.+++.+..+. -..   +....|
T Consensus       151 VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g---~~~~~p  226 (426)
T 3c75_H          151 VEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPD---CYHIFP  226 (426)
T ss_dssp             EEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCS---EEEEEE
T ss_pred             EEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCC---ceeecc
Confidence            999999999998887653       122344678999999998874  5789999999988775332 222   133445


Q ss_pred             -cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEc
Q psy8152         138 -HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDP  216 (444)
Q Consensus       138 -~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~  216 (444)
                       ....+++.+.||.+.+.++.+++......   .     .+....    .+ ....+.|.+++..++..+..+.|.+.|+
T Consensus       227 ~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~---~-----~~~v~~----~p-~~~~~~~~~dg~~~~~~s~~g~V~ViD~  293 (426)
T 3c75_H          227 ASPTVFYMNCRDGSLARVDFADGETKVTNT---E-----VFHTED----EL-LINHPAFSLRSGRLVWPTYTGKIFQADL  293 (426)
T ss_dssp             EETTEEEEEETTSSEEEEECCTTCCEEEEC---C-----CCSCTT----SC-BCSCCEECTTTCEEEEEBTTSEEEEEEE
T ss_pred             CCCcEEEEEcCCCCEEEEECCCCcEEEEee---e-----eeccCC----Cc-eeeEeeecCCCCEEEEEeCCCcEEEEec
Confidence             33566777788888888885555442211   0     000000    00 1123567888887777778899999998


Q ss_pred             CCCCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccccC
Q psy8152         217 KITTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      . ......+..+...          ......++++|+++.+++...          .+.|.++|+.+ .+.+.++... .
T Consensus       294 ~-~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg-~  370 (426)
T 3c75_H          294 T-AEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELG-H  370 (426)
T ss_dssp             C-SSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEE-E
T ss_pred             c-CCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECC-C
Confidence            6 1111111111100          111234789999887777532          35799999999 9999998742 2


Q ss_pred             ceeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEee
Q psy8152         277 CVKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       277 ~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~  314 (444)
                      ...+++|+|+++ +++++. .++.|.|+|+.+++.+.++.
T Consensus       371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~  410 (426)
T 3c75_H          371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVD  410 (426)
T ss_dssp             EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEec
Confidence            578999999998 888888 58999999999999998873

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.67  E-value=5.9e-15  Score=147.44  Aligned_cols=272  Identities=10%  Similarity=-0.008  Sum_probs=171.0

Q ss_pred             cCCcEEEEEEcCC---eEEEE--eCCCCccccceee----ccccccE--EEEEeCCCeEEEE-----ecCCcEEEEEcCC
Q psy8152          53 VEESELLIAYSGQ---KIKIY--DTDFKNFNTNTDV----SFGEGDI--VGVSRYDECILTA-----VKSGDVKLWRYKT  116 (444)
Q Consensus        53 ~~~~~l~~~~~d~---~i~vw--~~~~~~~~~~~~~----~~~~~~v--~~~s~~~~~l~~~-----~~dg~i~iw~~~~  116 (444)
                      +++.+++....++   .-.||  +...+.....+..    .+|...+  .++||+|++|+.+     +.+..|++||+.+
T Consensus        77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t  156 (695)
T 2bkl_A           77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS  156 (695)
T ss_dssp             EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence            5788888766543   34444  4444443333221    1233234  4568999998843     3346899999999


Q ss_pred             CCcc-ccccccCCCeEEEEEeccCCEEEEeeCCCe-------------EEEEEcCCce----eeeeeecccceeeEeeeC
Q psy8152         117 EPDQ-WTNFNVGPQLECMKHNKHSNIIATGGKEND-------------LKLWDLNTTK----NIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       117 ~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~vwd~~~~~----~~~~~~~~~~~~~~~~~~  178 (444)
                      ++.+ ..... ......++|+|+++.|+.++.+..             |++|++.+++    .+.....+..        
T Consensus       157 g~~~~~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~--------  227 (695)
T 2bkl_A          157 GEWSKVDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPT--------  227 (695)
T ss_dssp             CCBCSSCCBS-CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTT--------
T ss_pred             CCCcCCcccC-cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCE--------
Confidence            8865 21111 111268999999999999988776             9999998865    3333222222        


Q ss_pred             CCcccccCccceeEEEEecCCCEEEEEeCCc----eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc---
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSDKVAVCSKQG----YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS---  251 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---  251 (444)
                                .+.++.|+|+|++|+.++.++    .|++|+..   .. ....+..+...+....+ ++|.+++.+.   
T Consensus       228 ----------~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~---~~-~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~  292 (695)
T 2bkl_A          228 ----------TFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG---EK-DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGA  292 (695)
T ss_dssp             ----------CEEEEEECTTSCCEEEEEEETTTEEEEEEECTT---CS-SCEEEEECSSCCEEEEE-ETTEEEEEECTTC
T ss_pred             ----------EEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC---CC-ceEEeecCCCceEEEEe-cCCcEEEEECCCC
Confidence                      588999999998888776555    66777654   22 33444445555666666 5666444443   


Q ss_pred             CCCcEEEEEcCCCCcc--eeEeccc--cCceeEEEecCCCCEEEEEECCCcEEEEEcC-CCceEEEeec--CCceeEEEE
Q psy8152         252 TTGDMMAVDLRGKGKP--CYKYKGF--AGCVKDIACPLNENLILSVSLDRHFRVHDFH-SKKLLRKDYM--QSRLTSILV  324 (444)
Q Consensus       252 ~dg~i~iwd~~~~~~~--~~~~~~h--~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~~--~~~i~~~~~  324 (444)
                      .++.|.+|++.+ +..  ...+..|  ...+..++|+ ++.++++...++..+||.+. .++.+..+..  ...+..+.+
T Consensus       293 ~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~  370 (695)
T 2bkl_A          293 PRQRVFEVDPAK-PARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMG  370 (695)
T ss_dssp             TTCEEEEEBTTB-CSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBS
T ss_pred             CCCEEEEEeCCC-CCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeec
Confidence            257899999987 553  2334333  4567888888 67788899999998888665 3555454432  333444433


Q ss_pred             cCCCcccccchhhhhcc----ccccCCCccccCCCcccc
Q psy8152         325 RSDFSLENETKKEEQEH----SEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       325 ~~~~~~~~~~~~~~~~~----s~~~d~~i~~W~~~~~~~  359 (444)
                      +         +++..++    +....+++.+|++.+++.
T Consensus       371 s---------~d~~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          371 L---------EDLDDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             C---------TTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             C---------CCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            3         2333444    445567899999877654

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.67  E-value=2.8e-14  Score=143.59  Aligned_cols=246  Identities=9%  Similarity=-0.043  Sum_probs=162.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------  108 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------  108 (444)
                      +|...+..++|| |++++|+.++.+     ..|++||+.+++.+.. ........-.+++|+ +.|+.++.++.      
T Consensus       160 ~~~~~~~~~~~S-PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~  236 (741)
T 1yr2_A          160 DGATALDAWAAS-DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAF  236 (741)
T ss_dssp             ---EEEEEEEEC-TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC------
T ss_pred             CCCEEEEeEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccc
Confidence            444578999999 799999887654     4699999999887543 111111134567899 88888876654      


Q ss_pred             --------EEEEEcCCCCccc--ccc--ccCCCeEEEEEeccCCEEEEeeCCC-----eEEEEEcCCc--eeeeeeeccc
Q psy8152         109 --------VKLWRYKTEPDQW--TNF--NVGPQLECMKHNKHSNIIATGGKEN-----DLKLWDLNTT--KNIFSAKNVS  169 (444)
Q Consensus       109 --------i~iw~~~~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~--~~~~~~~~~~  169 (444)
                              |++|++.++....  .+.  .+...+..+.|+|+|++|+..+.++     .|++||+.++  ++...+....
T Consensus       237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~  316 (741)
T 1yr2_A          237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL  316 (741)
T ss_dssp             --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred             ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence                    8899987765321  111  2334588999999999988877544     8999999876  3133333332


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH  245 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  245 (444)
                      .                  .+... ++|+++.|+..+.    ++.|.+|++. .........+..+...+..++|+ ++.
T Consensus       317 ~------------------~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~l~~~~~~~l~~~~~~-~~~  375 (741)
T 1yr2_A          317 K------------------AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS-GSTPRFDTVVPESKDNLESVGIA-GNR  375 (741)
T ss_dssp             S------------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEECS-SSSCEEEEEECCCSSEEEEEEEE-BTE
T ss_pred             C------------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC-CCccccEEEecCCCCeEEEEEEE-CCE
Confidence            2                  23344 3488888877665    4569999988 11112222234444556677887 566


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEE-EEE---CCCcEEEEEcCCCce
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLIL-SVS---LDRHFRVHDFHSKKL  309 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~-s~~---~dg~i~vw~~~~~~~  309 (444)
                      ++++...++..+||.+...+..+..+.. +.+.|..+.++|+++.|+ +.+   ..++|++||+.+++.
T Consensus       376 lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~  444 (741)
T 1yr2_A          376 LFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT  444 (741)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred             EEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            7788888888777765421566666664 367788999999987555 322   347899999988763

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.66  E-value=1.3e-13  Score=132.78  Aligned_cols=250  Identities=11%  Similarity=0.040  Sum_probs=172.3

Q ss_pred             CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeE
Q psy8152          54 EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLE  131 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~  131 (444)
                      .+.++++...++.|.++|..+++.+..+.. +.......++|+++++++++.++.|.+||+.  +++.+.. ........
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~-i~~G~~P~  243 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE-IKIGSEAR  243 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE-EECCSEEE
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE-EecCCCCc
Confidence            345566667789999999999999888763 3233456789999999999999999999995  6666643 33344578


Q ss_pred             EEEEe----ccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEE
Q psy8152         132 CMKHN----KHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVC  205 (444)
Q Consensus       132 ~~~~~----~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~  205 (444)
                      .++|+    |+|++++++.. .+.|.++|..+.+.+..+......+....++|       ...+..+..++++. +++..
T Consensus       244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p-------~~rva~i~~s~~~~~~vv~~  316 (567)
T 1qks_A          244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP-------EPRVAAILASHYRPEFIVNV  316 (567)
T ss_dssp             EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEES-------CCCEEEEEECSSSSEEEEEE
T ss_pred             eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccC-------CCceEEEEEcCCCCEEEEEe
Confidence            99999    69998887765 58999999999888876653221000000111       11477888888774 45555


Q ss_pred             eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEecc-----ccCcee
Q psy8152         206 SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKG-----FAGCVK  279 (444)
Q Consensus       206 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~-----h~~~i~  279 (444)
                      ...|.|.++|.. ......+..+. .......+.|+|++++|+++ ..++.|.++|+.+ ++.+..+..     |.+.-.
T Consensus       317 ~~~g~v~~vd~~-~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t-~kl~~~i~vgg~~Phpg~g~  393 (567)
T 1qks_A          317 KETGKILLVDYT-DLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPHPGRGA  393 (567)
T ss_dssp             TTTTEEEEEETT-CSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBCCTTCE
T ss_pred             cCCCeEEEEecC-CCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCC-CcEEEEEeccCcCCCCccce
Confidence            677999999988 22222233333 33456788999999988764 4678899999999 887776653     322121


Q ss_pred             EEEecCCCC-EEEEEE-CCCcEEEEEcCC-------CceEEEeecC
Q psy8152         280 DIACPLNEN-LILSVS-LDRHFRVHDFHS-------KKLLRKDYMQ  316 (444)
Q Consensus       280 ~~~~s~~~~-~l~s~~-~dg~i~vw~~~~-------~~~~~~~~~~  316 (444)
                      .+ ++|++. +++++. .++.|.+++..+       .+.+.++...
T Consensus       394 ~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~  438 (567)
T 1qks_A          394 NF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL  438 (567)
T ss_dssp             EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred             ee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC
Confidence            22 578754 444443 468999999988       5666666543

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.65  E-value=6.1e-13  Score=118.38  Aligned_cols=264  Identities=10%  Similarity=0.012  Sum_probs=174.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +...++...++.|.+|+.. ++.  .   .+....+...+.++++. +++..+++...++.|.+|+.. ++.. .+....
T Consensus        31 g~l~v~~~~~~~v~~~~~~-~~~--~---~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~  101 (300)
T 2qc5_A           31 GKVWFTQHKANKISSLDQS-GRI--K---EFEVPTPDAKVMCLIVS-SLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQ  101 (300)
T ss_dssp             SCEEEEETTTTEEEEECTT-SCE--E---EEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEE-EEECSS
T ss_pred             CCEEEEcCCCCeEEEECCC-Cce--E---EEECCCCCCcceeEEEC-CCCCEEEEecCCCeEEEECCC-CCeE-EecCCC
Confidence            3444444467889999877 542  1   12111344678999999 688777766667899999987 5543 333222


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      ....+.++  .++++++++...++.|..|+.. ++.... .......+.++++.++++++++....+.|..|+. +++..
T Consensus       102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~  179 (300)
T 2qc5_A          102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE  179 (300)
T ss_dssp             TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred             CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence            22344444  5677777776668899999987 554421 2224567899999999987777666788999998 44433


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN  242 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~  242 (444)
                      . +.....                ...+.++++.++++++++....+.|.+|+..   .......+..+...+.++++++
T Consensus       180 ~-~~~~~~----------------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~  239 (300)
T 2qc5_A          180 E-YPLPTN----------------AAAPVGITSGNDGALWFVEIMGNKIGRITTT---GEISEYDIPTPNARPHAITAGK  239 (300)
T ss_dssp             E-EECSST----------------TCCEEEEEECTTSSEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECS
T ss_pred             E-eeCCCC----------------CCCcceEEECCCCCEEEEccCCCEEEEEcCC---CcEEEEECCCCCCCceEEEECC
Confidence            2 211111                1148899999999887777777889999975   2222222333455688999999


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCCcce-eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         243 QSHYVIVGSTTGDMMAVDLRGKGKPC-YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       243 ~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      +|+++++...++.|..|+. . +... ..+......+.++++.++|+++++.. . .|..++.
T Consensus       240 ~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          240 NSEIWFTEWGANQIGRITN-D-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             TTCEEEEETTTTEEEEECT-T-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             CCCEEEeccCCCeEEEECC-C-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence            9987777767789999998 4 4433 22333445688999999988666544 4 6666664

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.65  E-value=5.4e-14  Score=127.09  Aligned_cols=279  Identities=14%  Similarity=-0.020  Sum_probs=192.3

Q ss_pred             EeeeccCCcEEEEEEc-----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEE
Q psy8152          48 LNWGNVEESELLIAYS-----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLW  112 (444)
Q Consensus        48 ~~~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw  112 (444)
                      .... |+++.+++...     ++.|.++|..+++.+..+... .. +-..++|++++++++.          .++.|.+|
T Consensus        38 ~~~~-pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~-P~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi  114 (386)
T 3sjl_D           38 EAPA-PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FL-PNPVVADDGSFIAHASTVFSRIARGERTDYVEVF  114 (386)
T ss_dssp             CCCC-CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SS-CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             eccC-CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CC-CcEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence            3444 78888888765     679999999999999888643 23 3388899999887775          36789999


Q ss_pred             EcCCCCcccccccc-------CCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc
Q psy8152         113 RYKTEPDQWTNFNV-------GPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       113 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      |..+.+.+..+.-.       ......++|+|+|++|+++..  ++.|.++|+.+++.+.++.....             
T Consensus       115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-------------  181 (386)
T 3sjl_D          115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-------------  181 (386)
T ss_dssp             CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-------------
T ss_pred             ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-------------
Confidence            99998877643211       234668999999999998864  68999999999998887743211             


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC----CCCee-EEEEc-cCCCEEEEEcCCCcEE
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP----DVALS-CITTT-NQSHYVIVGSTTGDMM  257 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~i~-~~~~~-~~~~~l~~~~~dg~i~  257 (444)
                              ...+....+.+++.+.||++.+.++..  ..+.......+    ..++. ...|. ++|++++ .+.+|.|+
T Consensus       182 --------~~~~P~g~~~~~~~~~DG~~~~v~~~~--~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~  250 (386)
T 3sjl_D          182 --------YHIFPTAPDTFFMHCRDGSLAKVAFGT--EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIH  250 (386)
T ss_dssp             --------EEEEEEETTEEEEEETTSCEEEEECCS--SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEE
T ss_pred             --------ceeecCCCceeEEECCCCCEEEEECCC--CCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEE
Confidence                    112322336677778888888888871  12222211111    12222 24664 6776655 45589999


Q ss_pred             EEEcCCCCc--ceeEec---------c-ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeec
Q psy8152         258 AVDLRGKGK--PCYKYK---------G-FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYM  315 (444)
Q Consensus       258 iwd~~~~~~--~~~~~~---------~-h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~  315 (444)
                      ++|+.. ..  .+..+.         + .......++++|+++.|+....          ...|.+.|+.+++.+.++..
T Consensus       251 v~d~~~-~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v  329 (386)
T 3sjl_D          251 QIDLSS-GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM  329 (386)
T ss_dssp             EEECTT-SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred             EEECCC-CcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC
Confidence            999976 43  333332         0 1233455788999988777643          25799999999999999998


Q ss_pred             CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      ..++++++++++-       +..++++...++.|.++|..+++...
T Consensus       330 g~~~~~lavs~D~-------~~~ly~tn~~~~~VsViD~~t~k~~~  368 (386)
T 3sjl_D          330 GHEIDSINVSQDE-------KPLLYALSTGDKTLYIHDAESGEELR  368 (386)
T ss_dssp             EEEECEEEECSSS-------SCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             CCCcceEEECCCC-------CeEEEEEcCCCCeEEEEECCCCcEEE
Confidence            8889999998662       11234445568999999998776544

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.65  E-value=1.1e-12  Score=116.72  Aligned_cols=257  Identities=8%  Similarity=-0.040  Sum_probs=173.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .....+.+|++. +++..+++...++.|.+|+.. ++... +....+...+.++  .+++.++++...++.|..|+.. +
T Consensus        17 ~~~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g   92 (300)
T 2qc5_A           17 IPDSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G   92 (300)
T ss_dssp             STTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             CCCCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence            345678999999 688877776678999999987 55443 3322223445554  4667777766667889999987 5


Q ss_pred             Ccccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee-eeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         118 PDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF-SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       118 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +.... .......+.++++.++++++++...++.|..|+.. ++... .+.....                  .+.++++
T Consensus        93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~------------------~~~~i~~  153 (300)
T 2qc5_A           93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS------------------YPAFITL  153 (300)
T ss_dssp             CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC------------------CEEEEEE
T ss_pred             CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC------------------CceeEEE
Confidence            54321 11234678999999999888877778899999987 54332 1211111                  4889999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE-eccc
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGF  274 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~h  274 (444)
                      .++++++++....+.|..|+..   .......+......+..+++.++++++++....+.|.+|+. . +..... +..+
T Consensus       154 d~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~  228 (300)
T 2qc5_A          154 GSDNALWFTENQNNSIGRITNT---GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T-GEISEYDIPTP  228 (300)
T ss_dssp             CTTSSEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T-CCEEEEECSST
T ss_pred             CCCCCEEEEecCCCeEEEECCC---CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C-CcEEEEECCCC
Confidence            9999977777668899999875   22222222334456889999999988877777788999998 4 444332 3344


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE-ee-cCCceeEEEEc
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK-DY-MQSRLTSILVR  325 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~-~~-~~~~i~~~~~~  325 (444)
                      ...+.++++.++++++++...++.|..|+. +++.... +. ....+.++++.
T Consensus       229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~  280 (300)
T 2qc5_A          229 NARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFG  280 (300)
T ss_dssp             TCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEEC
T ss_pred             CCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeC
Confidence            567889999999987776666789999998 4544321 11 22345555554

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.65  E-value=1.9e-13  Score=122.62  Aligned_cols=241  Identities=8%  Similarity=0.005  Sum_probs=162.2

Q ss_pred             ccceEEEeeeccCCcEEEE-------EEcCCeEEEEeCCCCcccccee--eccccccEEEE--EeCCCeEEEEecCCcEE
Q psy8152          42 KASVLALNWGNVEESELLI-------AYSGQKIKIYDTDFKNFNTNTD--VSFGEGDIVGV--SRYDECILTAVKSGDVK  110 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~-------~~~d~~i~vw~~~~~~~~~~~~--~~~~~~~v~~~--s~~~~~l~~~~~dg~i~  110 (444)
                      -....+++|+ +++.++++       +..++.|.+|+..+++......  ..++...+.++  ++++..|+.++..+.|.
T Consensus        17 ~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~   95 (314)
T 1pjx_A           17 IPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL   95 (314)
T ss_dssp             CTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred             CCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEE
Confidence            4566899999 78887777       6778999999988777643211  00123345454  56623444444455799


Q ss_pred             EEEcCCCCccccc-cc-----cCCCeEEEEEeccCCEEEEeeCC---------------CeEEEEEcCCceeeeeeeccc
Q psy8152         111 LWRYKTEPDQWTN-FN-----VGPQLECMKHNKHSNIIATGGKE---------------NDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus       111 iw~~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      +|+.. ++... + ..     ....+.++++.++++++++...+               +.|..|+.. ++.........
T Consensus        96 ~~d~~-g~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~  172 (314)
T 1pjx_A           96 VVQTD-GTFEE-IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ  172 (314)
T ss_dssp             EEETT-SCEEE-CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES
T ss_pred             EEeCC-CCEEE-EEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC
Confidence            99988 66542 2 21     12358899999999888776654               567777765 44332222111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEe----cCCCEEE-EEeCCceEEEEEcCCCCCc---cceEEEeCCC-CCeeEEEE
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFL----PNSDKVA-VCSKQGYVRVYDPKITTQR---RPVLKVDIPD-VALSCITT  240 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~-~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~-~~i~~~~~  240 (444)
                                         ....++|+    |+++.|+ +...++.|.+|++......   .....+..+. ..+..+++
T Consensus       173 -------------------~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~  233 (314)
T 1pjx_A          173 -------------------FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF  233 (314)
T ss_dssp             -------------------SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred             -------------------CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence                               36789999    9986554 4456889999997511111   1222233333 55788999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE-EEECCCcEEEEEcCC
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL-SVSLDRHFRVHDFHS  306 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~-s~~~dg~i~vw~~~~  306 (444)
                      +++|+++++...++.|.+|+..+ ++.+..+..+...+.+++|+|++++|+ +...++.|..|++..
T Consensus       234 d~~G~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          234 DEDNNLLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             BTTCCEEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCCCCEEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            99999888877788999999987 777777776667899999999999555 444567899998864

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.63  E-value=1.1e-12  Score=120.25  Aligned_cols=273  Identities=10%  Similarity=-0.029  Sum_probs=183.5

Q ss_pred             cCCcEEEEEEc--CC---eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEEEcCCC
Q psy8152          53 VEESELLIAYS--GQ---KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLWRYKTE  117 (444)
Q Consensus        53 ~~~~~l~~~~~--d~---~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw~~~~~  117 (444)
                      +++.+++++..  ..   .|.+||..+++.+..+..  ...+-..++|++++++++.          .++.|.+||..+.
T Consensus        30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~  107 (373)
T 2mad_H           30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--GFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF  107 (373)
T ss_pred             CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--CCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence            67777777653  22   889999999998776653  2344778899999988886          3678999999887


Q ss_pred             Ccccccccc-------CCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCc
Q psy8152         118 PDQWTNFNV-------GPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       118 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      +.+..+.-.       ......++|+|++++|+++..  ++.|.++| .+++.+.. +... .                 
T Consensus       108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~-----------------  168 (373)
T 2mad_H          108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T-----------------  168 (373)
T ss_pred             cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c-----------------
Confidence            766422111       123558999999999998874  57899999 98887766 4321 1                 


Q ss_pred             cceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceE--EEeCCCCCe-eEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         188 VWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL--KVDIPDVAL-SCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       188 ~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                          ++.+.|.+ +.+++.+.||.+.+++.. ........  .+.....++ ....+.+++..++..+..+.+.+.|+..
T Consensus       169 ----~~~~~~~~~~~~~~~~~dg~~~~vd~~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~  243 (373)
T 2mad_H          169 ----CYHIHPGAPSTFYLLCAQGGLAKTDHA-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA  243 (373)
T ss_pred             ----eEEEEeCCCceEEEEcCCCCEEEEECC-CcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC
Confidence                24455665 556667788999999873 21110110  000111221 2345666655555555788999999875


Q ss_pred             CCc--ceeEecc----------ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeecCCceeE
Q psy8152         264 KGK--PCYKYKG----------FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYMQSRLTS  321 (444)
Q Consensus       264 ~~~--~~~~~~~----------h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~~~i~~  321 (444)
                       ..  .+..+.-          .......++++|+++.|+++..          .+.|.++|+.+++.+.++.......+
T Consensus       244 -~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~  322 (373)
T 2mad_H          244 -AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDA  322 (373)
T ss_pred             -CcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCe
Confidence             32  2223221          1122344789999987777653          35799999999999999987778899


Q ss_pred             EEEcCCCcccccchhhh-hccccc-cCCCccccCCCcccccc
Q psy8152         322 ILVRSDFSLENETKKEE-QEHSEE-KGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       322 ~~~~~~~~~~~~~~~~~-~~~s~~-~d~~i~~W~~~~~~~~~  361 (444)
                      ++|+++         ++ ++.++. .++.|.++|..+.+...
T Consensus       323 i~~s~D---------g~~~l~v~~~~~~~V~ViD~~t~~vv~  355 (373)
T 2mad_H          323 ISVAQD---------GGPDLYALSAGTEVLHIYDAGAGDQDQ  355 (373)
T ss_pred             EEECCC---------CCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence            998855         45 555555 58999999998776553

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.63  E-value=3.5e-13  Score=125.25  Aligned_cols=240  Identities=9%  Similarity=0.029  Sum_probs=164.9

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC--cEEEEEcCCCCcc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG--DVKLWRYKTEPDQ  120 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~  120 (444)
                      .....|+|+ +++.++++...++.|++|+..++........ ..... .++++++++|+++..++  .|.+|+...+...
T Consensus       131 ~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~  207 (409)
T 3hrp_A          131 KYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP  207 (409)
T ss_dssp             CCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred             CCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence            467899999 7888777777779999999987776655432 22333 77889999998888766  7888887765543


Q ss_pred             ccc----cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         121 WTN----FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       121 ~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      ..+    ......+.+++++|+...|+.+..++.|+.|+..++.... +.....       .+.    ....+...++|+
T Consensus       208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~-~~~~~~-------~g~----~~~~P~~~ia~~  275 (409)
T 3hrp_A          208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL-IKQLEL-------SGS----LGTNPGPYLIYY  275 (409)
T ss_dssp             EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE-EEECCC-------CSC----CCCSSCCEEEEE
T ss_pred             EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE-Eecccc-------cCC----CCCCccccEEEe
Confidence            222    2145667899999954455557778899999998765322 111000       000    000011389999


Q ss_pred             cC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---------------CCeeEEEEccCCCEEEEEc-CCCcEEEE
Q psy8152         197 PN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---------------VALSCITTTNQSHYVIVGS-TTGDMMAV  259 (444)
Q Consensus       197 ~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~l~~~~-~dg~i~iw  259 (444)
                      |+ +.++++-...+.|+.|+..   ..  +..+.++.               .....++++|+|+++++-+ .++.|+.|
T Consensus       276 p~~g~lyv~d~~~~~I~~~~~~---g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~  350 (409)
T 3hrp_A          276 FVDSNFYMSDQNLSSVYKITPD---GE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKL  350 (409)
T ss_dssp             TTTTEEEEEETTTTEEEEECTT---CC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEE
T ss_pred             CCCCEEEEEeCCCCEEEEEecC---CC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEE
Confidence            95 5666666778899999987   22  22232221               3468899999999888887 88999999


Q ss_pred             EcCCCCcceeEeccc---------------cCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         260 DLRGKGKPCYKYKGF---------------AGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       260 d~~~~~~~~~~~~~h---------------~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      ++.. +. +.++.++               -.....+++++++.++++-..+++|+.+.+
T Consensus       351 ~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          351 DILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             ETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             ECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            9876 65 4444443               245789999999888888888888888765

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.59  E-value=1.2e-12  Score=129.37  Aligned_cols=293  Identities=11%  Similarity=0.108  Sum_probs=194.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcc-------cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNK-------ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      +..|++++.++.|+.+|..+++..-. + ........       .....+++.   +..|++++.++.|+.+|..+|+.+
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~-~~~~~~~~~~~~~~~~~~~~~a~~---~~~v~v~~~dg~l~alD~~tG~~~  151 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWT-Y-DPQIDRSTGFKGCCDVVNRGVALW---KGKVYVGAWDGRLIALDAATGKEV  151 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEE-E-CCCCCGGGGGGSSSCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEE-E-cCCCCccccccccccCCCCCceEE---CCEEEEEcCCCEEEEEECCCCCEE
Confidence            46788888899999999998875211 1 11100000       001223333   678889999999999999999998


Q ss_pred             cceeec-ccc--ccEEE-EEeCCCeEEEEec------CCcEEEEEcCCCCccccccccCC--------------------
Q psy8152          79 TNTDVS-FGE--GDIVG-VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNVGP--------------------  128 (444)
Q Consensus        79 ~~~~~~-~~~--~~v~~-~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~--------------------  128 (444)
                      ..+... ...  ..+.+ ....+..+++++.      ++.|+.||..+++.++.+.....                    
T Consensus       152 W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~  231 (677)
T 1kb0_A          152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP  231 (677)
T ss_dssp             EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred             eeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence            877643 100  11111 0113455555543      78999999999998864432211                    


Q ss_pred             ------------CeEEEEEeccCCEEEEeeCCC-------------------eEEEEEcCCceeeeeeecccceeeEeee
Q psy8152         129 ------------QLECMKHNKHSNIIATGGKEN-------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSV  177 (444)
Q Consensus       129 ------------~v~~~~~~~~~~~l~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~  177 (444)
                                  ....+++.|++.+++.++.++                   .|..+|..+++.+..++...+       
T Consensus       232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~-------  304 (677)
T 1kb0_A          232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG-------  304 (677)
T ss_dssp             GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT-------
T ss_pred             cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCC-------
Confidence                        113578888888888877664                   599999999999888765332       


Q ss_pred             CCCcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----------CCe--------
Q psy8152         178 KPDEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-----------VAL--------  235 (444)
Q Consensus       178 ~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----------~~i--------  235 (444)
                        +..+........-+....+|   ..|++++.+|.|+++|..   +++.+..+....           .++        
T Consensus       305 --d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~---tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~  379 (677)
T 1kb0_A          305 --DNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT---NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDG  379 (677)
T ss_dssp             --CCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCT
T ss_pred             --cccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC---CCCEeccccccccCcccccCCCCceeeccccCcC
Confidence              11111111122223344577   688999999999999998   666665544221           001        


Q ss_pred             ----------------eEEEEccCCCEEEEEcC-------------------------------------------CCcE
Q psy8152         236 ----------------SCITTTNQSHYVIVGST-------------------------------------------TGDM  256 (444)
Q Consensus       236 ----------------~~~~~~~~~~~l~~~~~-------------------------------------------dg~i  256 (444)
                                      ..++|+|+..++++...                                           .|.|
T Consensus       380 ~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l  459 (677)
T 1kb0_A          380 SKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRL  459 (677)
T ss_dssp             TSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEE
T ss_pred             CCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEE
Confidence                            25788998888877533                                           2789


Q ss_pred             EEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC
Q psy8152         257 MAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS  317 (444)
Q Consensus       257 ~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~  317 (444)
                      ..||+.+ ++.+.+++ +..++....+...+.+++.++.+|.+++||..+++++.++....
T Consensus       460 ~A~D~~t-G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~  518 (677)
T 1kb0_A          460 LAWDPVA-QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT  518 (677)
T ss_dssp             EEEETTT-TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             EEEeCCC-CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence            9999999 99988886 33445555666778888999999999999999999999887444

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.59  E-value=3.8e-13  Score=121.87  Aligned_cols=282  Identities=10%  Similarity=-0.038  Sum_probs=185.6

Q ss_pred             cccEEEecC-CC----cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeEEEE
Q psy8152           6 DYNIYIGSS-TG----AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKIKIY   70 (444)
Q Consensus         6 ~~~l~~g~~-dg----~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i~vw   70 (444)
                      ...+++... ++    .|.++|..+.+. .   ..+.. +. .+  .+.++ |++++++++.          .++.|.+|
T Consensus        31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v-~---~~i~v-G~-~P--~i~~s-pDg~~lyVan~~~~r~~~G~~~~~Vsvi  101 (368)
T 1mda_H           31 SRRSHITLPAYFAGTTENWVSCAGCGVT-L---GHSLG-AF-LS--LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVF  101 (368)
T ss_dssp             TTEEEEEECTTTCSSEEEEEEETTTTEE-E---EEEEE-CT-TC--EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEE
T ss_pred             CCeEEEECCccCCccceEEEEECCCCeE-E---EEEeC-CC-CC--ceEEC-CCCCEEEEEcccccccccCCCCCEEEEE
Confidence            344555543 34    788999988875 2   22222 22 23  79999 7999999886          36899999


Q ss_pred             eCCCCccccceeec-------cccccEEEEEeCCCeEEEEec--CCcEEE--EEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          71 DTDFKNFNTNTDVS-------FGEGDIVGVSRYDECILTAVK--SGDVKL--WRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        71 ~~~~~~~~~~~~~~-------~~~~~v~~~s~~~~~l~~~~~--dg~i~i--w~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      |+.+++.+..+...       +....-..++|+|++++++..  ...|.+  +|+.+   +..+ .-..   |+.+.|++
T Consensus       102 D~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i-~v~~---~~~~~p~g  174 (368)
T 1mda_H          102 DPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLT-KSAS---CFHIHPGA  174 (368)
T ss_dssp             CTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEE-ECSS---CCCCEEEE
T ss_pred             ECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEE-ECCC---ceEEccCC
Confidence            99999999988754       134556889999999998875  457888  88876   2212 1111   12234533


Q ss_pred             -CEEEEeeCCCeEEEEEcCC-----ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEE
Q psy8152         140 -NIIATGGKENDLKLWDLNT-----TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRV  213 (444)
Q Consensus       140 -~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i  213 (444)
                       ..+++.+.||.+.+.++.+     ++.+....   . .....          ..+.   . .+++..++..+. +.|.+
T Consensus       175 ~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t---~-~i~vg----------~~P~---~-~~~~~~~~~vs~-~~V~v  235 (368)
T 1mda_H          175 AATHYLGSCPASLAASDLAAAPAAAGIVGAQCT---G-AQNCS----------SQAA---Q-ANYPGMLVWAVA-SSILQ  235 (368)
T ss_dssp             TTEEECCCCTTSCEEEECCSSCCCCEECCCCSC---T-TSCBC----------SCCE---E-ETTTTEEEECBS-SCCEE
T ss_pred             CeEEEEEcCCCCEEEEECccccccCCeEEEEee---e-eeeCC----------CCcc---c-cccCCEEEEEcC-CEEEE
Confidence             4555667788888889876     43322110   0 00000          0122   3 666666666666 99999


Q ss_pred             EEcCCCCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcC---------CCcEEEEEcCCCCcceeEeccc
Q psy8152         214 YDPKITTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGST---------TGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       214 ~d~~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      .|+. ......+..+...          ......++|+|+++.++++..         .+.+.++|+.+ .+.+.++...
T Consensus       236 iD~~-~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg  313 (368)
T 1mda_H          236 GDIP-AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNG  313 (368)
T ss_dssp             EECC-SSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEE
T ss_pred             EECC-CCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECC
Confidence            9986 1111222222110          011223789999988887533         23566999999 9999888743


Q ss_pred             cCceeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEEc
Q psy8152         275 AGCVKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILVR  325 (444)
Q Consensus       275 ~~~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~  325 (444)
                      . ...+++|+|+++ ++++.. .++.|.++|+.+++.+.++........+++.
T Consensus       314 ~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~  365 (368)
T 1mda_H          314 H-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ  365 (368)
T ss_dssp             E-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred             C-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence            3 578999999997 566666 5999999999999999998877777777664

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.58  E-value=2.4e-13  Score=136.79  Aligned_cols=274  Identities=12%  Similarity=0.018  Sum_probs=170.7

Q ss_pred             cCCcEEEEEEcCCe---EEEEeCC-----CCccccceee----cccccc--EEEEEeCCCeEEEEecC-----CcEEEEE
Q psy8152          53 VEESELLIAYSGQK---IKIYDTD-----FKNFNTNTDV----SFGEGD--IVGVSRYDECILTAVKS-----GDVKLWR  113 (444)
Q Consensus        53 ~~~~~l~~~~~d~~---i~vw~~~-----~~~~~~~~~~----~~~~~~--v~~~s~~~~~l~~~~~d-----g~i~iw~  113 (444)
                      |++++++....++.   -.+|...     .+.....+..    .++...  -.++||+|++|+.+..+     ..|++||
T Consensus       116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d  195 (741)
T 1yr2_A          116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG  195 (741)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence            67888887665432   5555543     3333222111    122222  34668999998877654     4699999


Q ss_pred             cCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCe--------------EEEEEcCCcee--eeeeecccceeeEeee
Q psy8152         114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEND--------------LKLWDLNTTKN--IFSAKNVSHRVLVYSV  177 (444)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~  177 (444)
                      +.+++.+. ...+...+..++|+|+ +.|+.++.++.              |++|++.++..  ...+.....       
T Consensus       196 l~tg~~~~-~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-------  266 (741)
T 1yr2_A          196 VADGKPLA-DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL-------  266 (741)
T ss_dssp             TTTCCEEE-EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC-------
T ss_pred             CCCCCCCC-ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-------
Confidence            99998764 2222222367899999 98988876554              88999877542  111111111       


Q ss_pred             CCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcCCCCCc--cceEEEeCCCCCeeEEEEccCCCEEEEE
Q psy8152         178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPKITTQR--RPVLKVDIPDVALSCITTTNQSHYVIVG  250 (444)
Q Consensus       178 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~  250 (444)
                               +..+..+.|+|+|++|+..+.+     ..|++||+.   ..  .+...+..+...+... ++|+|+.|+..
T Consensus       267 ---------~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~---~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~  333 (741)
T 1yr2_A          267 ---------PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT---NGKIGPVTALIPDLKAQWDF-VDGVGDQLWFV  333 (741)
T ss_dssp             ---------TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE---TTEECCCEEEECSSSSCEEE-EEEETTEEEEE
T ss_pred             ---------CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC---CCCCcccEEecCCCCceEEE-EeccCCEEEEE
Confidence                     1247889999999988877654     389999998   33  2144555555555555 34888888876


Q ss_pred             cCC----CcEEEEEcCCCC--cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC-CCceEEEeec--CCceeE
Q psy8152         251 STT----GDMMAVDLRGKG--KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH-SKKLLRKDYM--QSRLTS  321 (444)
Q Consensus       251 ~~d----g~i~iwd~~~~~--~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~~--~~~i~~  321 (444)
                      +..    +.|.+|++.+ +  .....+..+...+..++|+ ++.++++...++..+||.+. +++.+..+..  ...+..
T Consensus       334 s~~~~~~~~l~~~d~~~-~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~  411 (741)
T 1yr2_A          334 SGDGAPLKKIVRVDLSG-STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASG  411 (741)
T ss_dssp             ECTTCTTCEEEEEECSS-SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEE
T ss_pred             ECCCCCCCEEEEEeCCC-CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEE
Confidence            653    4599999887 4  2233344455567778887 56788888889987777654 3555555542  345666


Q ss_pred             EEEcCCCcccccchhhhhcc----ccccCCCccccCCCcccc
Q psy8152         322 ILVRSDFSLENETKKEEQEH----SEEKGDSDEKYDPEHFEM  359 (444)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~----s~~~d~~i~~W~~~~~~~  359 (444)
                      +.++++         +..++    +....+++.+|++.+++.
T Consensus       412 ~~~s~d---------~~~l~~~~ss~~~P~~i~~~d~~tg~~  444 (741)
T 1yr2_A          412 LSGRPG---------DRHAYLSFSSFTQPATVLALDPATAKT  444 (741)
T ss_dssp             EECCBT---------CSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred             eecCCC---------CCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            665543         33333    444567899999876653

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.57  E-value=3.8e-13  Score=123.85  Aligned_cols=275  Identities=13%  Similarity=0.013  Sum_probs=188.6

Q ss_pred             eeccCCcEEEEEEcC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEEEc
Q psy8152          50 WGNVEESELLIAYSG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLWRY  114 (444)
Q Consensus        50 ~~~~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw~~  114 (444)
                      .-|+++.+++++...     +.|.++|..+++.+..+.... .. -..++|++++|+++.          .++.|.++|.
T Consensus        79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~  156 (426)
T 3c75_H           79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP  156 (426)
T ss_dssp             CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence            334567777766553     699999999999999887533 33 677899999888876          3678999999


Q ss_pred             CCCCcccccc-c------cCCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         115 KTEPDQWTNF-N------VGPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       115 ~~~~~~~~~~-~------~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      .+++.+..+. +      .......++|+|++++|+++..  ++.|.+.|+.+++.+.++.....               
T Consensus       157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---------------  221 (426)
T 3c75_H          157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---------------  221 (426)
T ss_dssp             TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---------------
T ss_pred             CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---------------
Confidence            9988775332 1      1234568999999999999874  58899999999998877653211               


Q ss_pred             CccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEE----EeCCCCCe-eEEEEccCCCEEEEEcCCCcEEEE
Q psy8152         186 RPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLK----VDIPDVAL-SCITTTNQSHYVIVGSTTGDMMAV  259 (444)
Q Consensus       186 ~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~iw  259 (444)
                             ....|.+ ..+++.+.||++.+.++.   ..+....    +.....++ ..+.|.+++..++..+..+.+.+.
T Consensus       222 -------~~~~p~g~~~~v~~~~dG~~~~V~~~---~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~Vi  291 (426)
T 3c75_H          222 -------YHIFPASPTVFYMNCRDGSLARVDFA---DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQA  291 (426)
T ss_dssp             -------EEEEEEETTEEEEEETTSSEEEEECC---TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEE
T ss_pred             -------eeeccCCCcEEEEEcCCCCEEEEECC---CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEE
Confidence                   2233333 455556667777666664   2222211    11111221 245688988887777788999999


Q ss_pred             EcCCCCcc--eeEecc----------ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeecCC
Q psy8152         260 DLRGKGKP--CYKYKG----------FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYMQS  317 (444)
Q Consensus       260 d~~~~~~~--~~~~~~----------h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~~  317 (444)
                      |+.. ...  +..+.-          .......++++|+++++++...          .+.|.++|+.+++.+.++....
T Consensus       292 D~~~-~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~  370 (426)
T 3c75_H          292 DLTA-EGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH  370 (426)
T ss_dssp             EECS-SCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred             eccC-CceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC
Confidence            9865 321  111110          0112233689999887776542          3579999999999999998777


Q ss_pred             ceeEEEEcCCCcccccchhhh-hccccc-cCCCccccCCCcccccc
Q psy8152         318 RLTSILVRSDFSLENETKKEE-QEHSEE-KGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       318 ~i~~~~~~~~~~~~~~~~~~~-~~~s~~-~d~~i~~W~~~~~~~~~  361 (444)
                      ...+++|+++         ++ ++.+.. .++.|.++|..+.+...
T Consensus       371 ~P~gia~spD---------g~~~lyv~n~~s~~VsVID~~t~kvv~  407 (426)
T 3c75_H          371 EIDSINVSQD---------AEPLLYALSAGTQTLHIYDAATGEELR  407 (426)
T ss_dssp             EECEEEECCS---------SSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             CcCeEEEccC---------CCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence            7889998855         44 555555 58999999998777553

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.57  E-value=8.5e-12  Score=114.98  Aligned_cols=309  Identities=11%  Similarity=0.082  Sum_probs=192.7

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeeccc---Cc--ccceE-EEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI---TN--KASVL-ALNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~---~h--~~~v~-~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      .+..|++++.++.|+.+|..+++..- . ..+...   .+  ...+. .+..   .+..+++++.++.|..+|..+++.+
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W-~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~tG~~~  126 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIW-S-VSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSDGTVA  126 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEE-E-EECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceee-e-ecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCCCCEE
Confidence            35678889999999999998887421 1 111100   00  12232 2333   3678888999999999999999988


Q ss_pred             cceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCe------EEEEEeccCCEEEEeeCCCeEE
Q psy8152          79 TNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQL------ECMKHNKHSNIIATGGKENDLK  152 (444)
Q Consensus        79 ~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~d~~i~  152 (444)
                      ..+..........  ...+..+++++.++.|..+|..+++.++..... .++      .....  .+..++.++.++.|.
T Consensus       127 W~~~~~~~~~~~p--~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~  201 (376)
T 3q7m_A          127 WQTKVAGEALSRP--VVSDGLVLIHTSNGQLQALNEADGAVKWTVNLD-MPSLSLRGESAPTT--AFGAAVVGGDNGRVS  201 (376)
T ss_dssp             EEEECSSCCCSCC--EEETTEEEEECTTSEEEEEETTTCCEEEEEECC-C-----CCCCCCEE--ETTEEEECCTTTEEE
T ss_pred             EEEeCCCceEcCC--EEECCEEEEEcCCCeEEEEECCCCcEEEEEeCC-CCceeecCCCCcEE--ECCEEEEEcCCCEEE
Confidence            7665432211111  123567888889999999999999888643332 222      12222  245788888899999


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccce-eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV-NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP  231 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  231 (444)
                      .+|..+++.+............ .  ...+.     .+ .....  .+..+++++.++.|..+|..   .++.+......
T Consensus       202 ~~d~~tG~~~w~~~~~~~~~~~-~--~~~~~-----~~~~~p~~--~~~~v~~~~~~g~l~~~d~~---tG~~~w~~~~~  268 (376)
T 3q7m_A          202 AVLMEQGQMIWQQRISQATGST-E--IDRLS-----DVDTTPVV--VNGVVFALAYNGNLTALDLR---SGQIMWKRELG  268 (376)
T ss_dssp             EEETTTCCEEEEEECCC-------------------CCCCCCEE--ETTEEEEECTTSCEEEEETT---TCCEEEEECCC
T ss_pred             EEECCCCcEEEEEecccCCCCc-c--ccccc-----ccCCCcEE--ECCEEEEEecCcEEEEEECC---CCcEEeeccCC
Confidence            9999999988776533210000 0  00000     00 01111  24677778889999999998   66666655432


Q ss_pred             CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                        ....+..  .+..|++++.++.|..+|..+ ++.+..... ....+.....  .+..|+.++.+|.|+++|..+++.+
T Consensus       269 --~~~~~~~--~~~~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~  341 (376)
T 3q7m_A          269 --SVNDFIV--DGNRIYLVDQNDRVMALTIDG-GVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV  341 (376)
T ss_dssp             --CEEEEEE--ETTEEEEEETTCCEEEEETTT-CCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             --CCCCceE--ECCEEEEEcCCCeEEEEECCC-CcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence              2344444  356788888899999999999 988877662 2222333333  2567888899999999999999988


Q ss_pred             EEeec-CCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         311 RKDYM-QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       311 ~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .+... ...+.+...          ..+..+..++.+|.+..|+
T Consensus       342 ~~~~~~~~~~~~~~~----------~~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          342 AQQKVDSSGFQTEPV----------AADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             EEEECCTTCBCSCCE----------EETTEEEEEBTTSCEEEEE
T ss_pred             EEEecCCCcceeCCE----------EECCEEEEEeCCCEEEEEe
Confidence            77654 333221110          1123455566778877764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.56  E-value=1.3e-12  Score=116.17  Aligned_cols=229  Identities=14%  Similarity=0.075  Sum_probs=150.1

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ..-.-+..|+|.++.++++....+.|+.|+..+++.. .+.. .......+++++++++++ . ++.|.+|+..+++...
T Consensus        12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~   87 (297)
T 3g4e_A           12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM-DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV   87 (297)
T ss_dssp             CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC-SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred             CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC-CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence            3455688899434556666667899999999877652 3322 112223445678885554 3 5689999998776542


Q ss_pred             cccc-----cCCCeEEEEEeccCCEEEEeeCC---------CeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccC
Q psy8152         122 TNFN-----VGPQLECMKHNKHSNIIATGGKE---------NDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       122 ~~~~-----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                       +..     ....++.+++.|+|+++++....         ..-.+|.+.. ++........ .                
T Consensus        88 -~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~-~----------------  149 (297)
T 3g4e_A           88 -LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV-D----------------  149 (297)
T ss_dssp             -EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE-S----------------
T ss_pred             -EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc-c----------------
Confidence             221     12347889999999877654321         2234554443 3322222111 1                


Q ss_pred             ccceeEEEEecCCCEE-EEEeCCceEEEEEcC-CCCCc---cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEc
Q psy8152         187 PVWVNGISFLPNSDKV-AVCSKQGYVRVYDPK-ITTQR---RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDL  261 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~-~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  261 (444)
                        ..+.++|+|+++.| ++.+..+.|.+|++. ..+..   +.+..+..+......+++.++|++.++....+.|.+||.
T Consensus       150 --~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~  227 (297)
T 3g4e_A          150 --ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP  227 (297)
T ss_dssp             --BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred             --cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence              36889999999866 455667899999974 11111   112222223356789999999988888777888999999


Q ss_pred             CCCCcceeEeccccCceeEEEec-CCCCEEEEEEC
Q psy8152         262 RGKGKPCYKYKGFAGCVKDIACP-LNENLILSVSL  295 (444)
Q Consensus       262 ~~~~~~~~~~~~h~~~i~~~~~s-~~~~~l~s~~~  295 (444)
                      .+ ++.+..+..+...+++++|. |+++.|+.++.
T Consensus       228 ~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          228 VT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             TT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             CC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence            98 89999888777789999998 88876665553

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.55  E-value=4.6e-12  Score=125.50  Aligned_cols=292  Identities=11%  Similarity=0.114  Sum_probs=188.8

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccC----c-c-cce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYIT----N-K-ASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~----h-~-~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      +..|++++.++.|+.+|..+++..-+ +. .....    + . ..+ ..+++.   +..|++++.|+.|+.+|..+|+.+
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~~-~~~~~~~~~~~~~~~~~~~~~~~---~g~v~v~~~dg~l~AlDa~TG~~~  144 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWK-YD-PQSDRHRAGEACCDAVNRGVAVW---KGKVYVGVLDGRLEAIDAKTGQRA  144 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEE-EC-CCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEE-Ec-CCCCccccccccccCCCCccEEE---CCEEEEEccCCEEEEEECCCCCEe
Confidence            56788888899999999998885211 11 11000    0 0 001 122333   678889999999999999999998


Q ss_pred             cceeeccccccEEEE--Ee--CCCeEEEEe------cCCcEEEEEcCCCCcccccccc----------------------
Q psy8152          79 TNTDVSFGEGDIVGV--SR--YDECILTAV------KSGDVKLWRYKTEPDQWTNFNV----------------------  126 (444)
Q Consensus        79 ~~~~~~~~~~~v~~~--s~--~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~----------------------  126 (444)
                      ..+....+......+  +|  .+..+++++      .++.|+.||..+++.++.+...                      
T Consensus       145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g  224 (689)
T 1yiq_A          145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG  224 (689)
T ss_dssp             EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred             eeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence            777542011100000  11  234444443      3689999999999987744310                      


Q ss_pred             ---------CCCeEEEEEeccCCEEEEeeCCCe-------------------EEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152         127 ---------GPQLECMKHNKHSNIIATGGKEND-------------------LKLWDLNTTKNIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       127 ---------~~~v~~~~~~~~~~~l~~~~~d~~-------------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~  178 (444)
                               ......+++.|+..+++.++.++.                   |..||..+++.+..++...+.       
T Consensus       225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d-------  297 (689)
T 1yiq_A          225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGD-------  297 (689)
T ss_dssp             STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTC-------
T ss_pred             ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcc-------
Confidence                     011125788888888998887764                   999999999999887653320       


Q ss_pred             CCcccccCccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----------------------
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-----------------------  232 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----------------------  232 (444)
                        ..+......+.......+|+   .++.++.+|.++++|..   +++.+.......                       
T Consensus       298 --~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~  372 (689)
T 1yiq_A          298 --AWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRA---TGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAY  372 (689)
T ss_dssp             --CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCT
T ss_pred             --cccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECC---CCCEeccccccccccccccCccCCCcccchhhccc
Confidence              00000011122222333554   78899999999999998   555543222110                       


Q ss_pred             ----------------CCeeEEEEccCCCEEEEEcC--------------------------------------------
Q psy8152         233 ----------------VALSCITTTNQSHYVIVGST--------------------------------------------  252 (444)
Q Consensus       233 ----------------~~i~~~~~~~~~~~l~~~~~--------------------------------------------  252 (444)
                                      ..-..++|+|+..+|++...                                            
T Consensus       373 ~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~  452 (689)
T 1yiq_A          373 WKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKS  452 (689)
T ss_dssp             TTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTT
T ss_pred             cCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCC
Confidence                            01123788998777776522                                            


Q ss_pred             -CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152         253 -TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ  316 (444)
Q Consensus       253 -dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~  316 (444)
                       +|.|+.||+.+ ++.+.+++.+. ++....+...+.+++.++.||.|++||..+|+++.++...
T Consensus       453 ~~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~  515 (689)
T 1yiq_A          453 WSGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA  515 (689)
T ss_dssp             CEEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cceeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence             37799999999 99998887543 3344456667889999999999999999999999887744

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.55  E-value=2e-13  Score=123.94  Aligned_cols=173  Identities=9%  Similarity=0.068  Sum_probs=130.6

Q ss_pred             cccEEEEEeCCCeEEEEecCCcEEEEEcCCCC---------ccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          87 EGDIVGVSRYDECILTAVKSGDVKLWRYKTEP---------DQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      .....++++...++++|+.+ .+++|++...+         ... ....+.. |+.++|  ++++|+++ .++.|++||+
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence            45667888999999999887 56669865433         111 2345667 999999  89999999 8899999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS  236 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~  236 (444)
                      .+.........+..                  .+.++.+.+.  .+++++.||.|.+||+.   ......    +...|+
T Consensus       114 ~sl~~~~~~~~~~~------------------~v~~i~~~~p--~~av~~~dG~L~v~dl~---~~~~~~----~~~~Vs  166 (388)
T 1xip_A          114 EELSEFRTVTSFEK------------------PVFQLKNVNN--TLVILNSVNDLSALDLR---TKSTKQ----LAQNVT  166 (388)
T ss_dssp             SSTTCEEEEEECSS------------------CEEEEEECSS--EEEEEETTSEEEEEETT---TCCEEE----EEESEE
T ss_pred             hhhhccCccceeec------------------ceeeEEecCC--CEEEEECCCCEEEEEcc---CCcccc----ccCCce
Confidence            88554444444444                  4677776653  38889999999999998   333332    234799


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--eeEe------c---cccCceeEEEecCCCCEEEEEE
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--CYKY------K---GFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~------~---~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      +++|||+|  ++.|..||++++|+... ...  ..++      .   +|...|.+|.|.+++.++++-+
T Consensus       167 ~v~WSpkG--~~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          167 SFDVTNSQ--LAVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             EEEECSSE--EEEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             EEEEcCCc--eEEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence            99999999  67788999999998886 554  5556      2   3678899999999999888754

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.54  E-value=4.8e-12  Score=113.42  Aligned_cols=226  Identities=11%  Similarity=0.080  Sum_probs=147.0

Q ss_pred             ecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-eeec-c---c
Q psy8152          12 GSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN-TDVS-F---G   86 (444)
Q Consensus        12 g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-~~~~-~---~   86 (444)
                      +..++.|.+|+..+++.  ..+..-...++...+.+++++ +++..|+.++..+.|.+|+.. ++.... .... .   .
T Consensus        42 ~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~~-~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~  117 (314)
T 1pjx_A           42 GKPAGEILRIDLKTGKK--TVICKPEVNGYGGIPAGCQCD-RDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQ  117 (314)
T ss_dssp             TEECCEEEEECTTTCCE--EEEECCEETTEECCEEEEEEC-SSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred             CCCCCEEEEEeCCCCcE--EEEEecccCCCCCCCceEEEe-cCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCcccc
Confidence            46788999999877763  222110001355678999999 672344444445589999988 665433 2211 1   1


Q ss_pred             cccEEEEEeCCCeEEEEecC---------------CcEEEEEcCCCCccccccccCCCeEEEEEe----ccCCEEEEe-e
Q psy8152          87 EGDIVGVSRYDECILTAVKS---------------GDVKLWRYKTEPDQWTNFNVGPQLECMKHN----KHSNIIATG-G  146 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~d---------------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~  146 (444)
                      ...-..+.++++++++...+               +.|..|+.. ++.. .+..+......++|+    |+++.|+.+ .
T Consensus       118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~  195 (314)
T 1pjx_A          118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAET  195 (314)
T ss_dssp             CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred             CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence            12234556788877766554               466666655 4433 233444567889999    988655544 5


Q ss_pred             CCCeEEEEEcC-Ccee-----eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC
Q psy8152         147 KENDLKLWDLN-TTKN-----IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT  220 (444)
Q Consensus       147 ~d~~i~vwd~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  220 (444)
                      .++.|.+|++. .++.     ...+..+.                 ...+..++++++|+++++...++.|.+|+..   
T Consensus       196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-----------------~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~---  255 (314)
T 1pjx_A          196 PTKKLWSYDIKGPAKIENKKVWGHIPGTH-----------------EGGADGMDFDEDNNLLVANWGSSHIEVFGPD---  255 (314)
T ss_dssp             TTTEEEEEEEEETTEEEEEEEEEECCCCS-----------------SCEEEEEEEBTTCCEEEEEETTTEEEEECTT---
T ss_pred             CCCeEEEEECCCCCccccceEEEECCCCC-----------------CCCCCceEECCCCCEEEEEcCCCEEEEEcCC---
Confidence            67899999986 3432     11111111                 0147889999999988888788999999987   


Q ss_pred             CccceEEEeCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCC
Q psy8152         221 QRRPVLKVDIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRG  263 (444)
Q Consensus       221 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~  263 (444)
                      ....+..+..+...+.+++|+|++++|+ +...++.|..|++..
T Consensus       256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            4555566666667789999999999554 555668899999876

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.53  E-value=4.6e-13  Score=121.55  Aligned_cols=173  Identities=13%  Similarity=0.101  Sum_probs=131.3

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---------cccceeeccccccEEEEEeCCCeEEEEecCCcEEEEE
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---------FNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWR  113 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---------~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~  113 (444)
                      .++..++++ +...+|++|+.+ .+++|+++..+         ....... .+.. |..++.++++|+++ .++.|++|+
T Consensus        38 ~~~nlLais-~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           38 ASLQNLDIS-NSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             SCCBCEEEE-TTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEE
T ss_pred             ccccEEEEc-CCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEE
Confidence            368999999 789999999986 56679876443         1111111 3344 77776688899988 889999999


Q ss_pred             cCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      +.+.........|..++.++.+.+.  .+++++.||.|.+|++..+....    +..                  .|+|+
T Consensus       113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~------------------~Vs~v  168 (388)
T 1xip_A          113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQ------------------NVTSF  168 (388)
T ss_dssp             SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEE------------------SEEEE
T ss_pred             chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccC------------------CceEE
Confidence            9877655455667778888877654  38889999999999999876543    122                  59999


Q ss_pred             EEecCCCEEEEEeCCceEEEEEcCCCCCccc--eEEE------e---CCCCCeeEEEEccCCCEEEE
Q psy8152         194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRP--VLKV------D---IPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~~  249 (444)
                      +|+|+|  ++.|..||++++|+..   ....  ..++      .   +|...|.+|.|.+++.++++
T Consensus       169 ~WSpkG--~~vg~~dg~i~~~~~~---~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          169 DVTNSQ--LAVLLKDRSFQSFAWR---NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             EECSSE--EEEEETTSCEEEEEEE---TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             EEcCCc--eEEEEcCCcEEEEcCC---CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            999998  7789999999999887   3332  4445      2   36788999999999988886

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.52  E-value=1.7e-11  Score=108.97  Aligned_cols=213  Identities=12%  Similarity=0.028  Sum_probs=144.1

Q ss_pred             EEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152          91 VGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus        91 ~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      ..++++ +.++++....+.|+.|+..+++..  .......+.+++++++++++++ . ++.|.+||..+++.........
T Consensus        18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~   93 (297)
T 3g4e_A           18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDN   93 (297)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTTCCEE--EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCT
T ss_pred             CeEECCCCEEEEEECCCCEEEEEECCCCcEE--EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCC
Confidence            344564 445666667899999999877653  3445678999999999985554 3 5689999998766432222111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC---------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEE
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK---------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITT  240 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~  240 (444)
                      .              .....++.++++|+|+++++...         .....+|.+..  ... +..+.........++|
T Consensus        94 ~--------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~--~g~-~~~~~~~~~~pngi~~  156 (297)
T 3g4e_A           94 D--------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP--DHH-VKKYFDQVDISNGLDW  156 (297)
T ss_dssp             T--------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT--TSC-EEEEEEEESBEEEEEE
T ss_pred             C--------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC--CCC-EEEEeeccccccceEE
Confidence            0              00124789999999987765422         12345555541  122 2222223334678999


Q ss_pred             ccCCCEEE-EEcCCCcEEEEEcC--CCCcc-----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         241 TNQSHYVI-VGSTTGDMMAVDLR--GKGKP-----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       241 ~~~~~~l~-~~~~dg~i~iwd~~--~~~~~-----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      +|+++.|+ +.+..+.|.+|++.  + +..     +..+..+...+..+++.++|++.++....+.|.+|+..+++++..
T Consensus       157 spdg~~lyv~~~~~~~i~~~~~d~~~-G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~  235 (297)
T 3g4e_A          157 SLDHKIFYYIDSLSYSVDAFDYDLQT-GQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT  235 (297)
T ss_dssp             CTTSCEEEEEEGGGTEEEEEEECTTT-CCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred             cCCCCEEEEecCCCCcEEEEeccCCC-CcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence            99998765 55667889999973  4 432     223333446678999999998888877888999999999999888


Q ss_pred             eecC-CceeEEEEc
Q psy8152         313 DYMQ-SRLTSILVR  325 (444)
Q Consensus       313 ~~~~-~~i~~~~~~  325 (444)
                      +... ..+++++|.
T Consensus       236 i~~p~~~~t~~~f~  249 (297)
T 3g4e_A          236 VKLPVDKTTSCCFG  249 (297)
T ss_dssp             EECSSSBEEEEEEE
T ss_pred             EECCCCCceEEEEe
Confidence            8754 678999997

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.52  E-value=3.8e-12  Score=126.88  Aligned_cols=243  Identities=9%  Similarity=0.033  Sum_probs=160.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEE-----cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152          40 TNKASVLALNWGNVEESELLIAY-----SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------  108 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~-----~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------  108 (444)
                      +|...+..++|| |++++||.+.     ....|++||+.+++.+.. ..........+++ +++.|+.++.+..      
T Consensus       126 ~~~~~l~~~~~S-pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~  202 (693)
T 3iuj_A          126 DGTTALDQLSFS-RDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELS  202 (693)
T ss_dssp             TSCCEEEEEEEC-TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred             CCcEEEEEEEEC-CCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence            466688999999 7999888533     235799999999986543 2222222345678 9999988887743      


Q ss_pred             -------EEEEEcCCCCc----cccccc-cCCCeEEEEEeccCCEEEEeeC----CCeEEEEEcCCce-eeeeeecccce
Q psy8152         109 -------VKLWRYKTEPD----QWTNFN-VGPQLECMKHNKHSNIIATGGK----ENDLKLWDLNTTK-NIFSAKNVSHR  171 (444)
Q Consensus       109 -------i~iw~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~-~~~~~~~~~~~  171 (444)
                             |++|++.+++.    +..... |...+..+.|+|++++|+....    .+.|+++++.++. ....+..+.. 
T Consensus       203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-  281 (693)
T 3iuj_A          203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-  281 (693)
T ss_dssp             --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-
T ss_pred             ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-
Confidence                   99999887653    212222 4455788999999998865432    3589999998753 3333333333 


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeC---CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSK---QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV  247 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  247 (444)
                                       ..... +++++..|+ +...   .+.|..+++. .........+..+...+.  .|++++++|
T Consensus       282 -----------------~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~--~~s~~g~~l  340 (693)
T 3iuj_A          282 -----------------ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA-NPGPAHWRDLIPERQQVL--TVHSGSGYL  340 (693)
T ss_dssp             -----------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEETT-SCCGGGCEEEECCCSSCE--EEEEETTEE
T ss_pred             -----------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC-CCCccccEEEecCCCCEE--EEEEECCEE
Confidence                             23443 566665554 4433   3689999998 222222345566665554  889999888


Q ss_pred             EEEcCCC---cEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECC----CcEEEEEcCCCce
Q psy8152         248 IVGSTTG---DMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLD----RHFRVHDFHSKKL  309 (444)
Q Consensus       248 ~~~~~dg---~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~d----g~i~vw~~~~~~~  309 (444)
                      +....++   .|++|++..  .....+. ...+.+..+.+++++..|+....+    ++|+.|++.+++.
T Consensus       341 v~~~~~~g~~~l~~~d~~g--~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          341 FAEYMVDATARVEQFDYEG--KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             EEEEEETTEEEEEEECTTS--CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             EEEEEECCeeEEEEEECCC--CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            7765544   688998875  3444444 344567778888888766555444    7899999987654

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.50  E-value=3.2e-12  Score=115.46  Aligned_cols=294  Identities=10%  Similarity=0.022  Sum_probs=186.6

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+..|++++.++.|..|+ .+++..    ....  .+...+.++... ++ ..|+.++.+  |..|+. +++....+...
T Consensus        29 ~~g~l~v~t~~~~l~~~d-~~g~~~----~~~~--~~~~~~~~~~~~-~~-g~l~v~t~~--l~~~d~-~g~~~~~~~~~   96 (330)
T 3hxj_A           29 KNGTIYLGSSNKNLYAIN-TDGSVK----WFFK--SGEIIECRPSIG-KD-GTIYFGSDK--VYAINP-DGTEKWRFDTK   96 (330)
T ss_dssp             TTSCEECSSTTTTTEEEC-TTSCEE----ESSC--GGGEEEECCEET-TT-TEECCSSCE--EEEECC-CGGGGGGSCC-
T ss_pred             cCCeEEEEcCCCEEEEEC-CCCcEE----EEEe--cCCCcccceEEe-cC-CcEEEecCc--EEEECC-CCcEEEEEECC
Confidence            356788999899999999 666631    1111  233455666666 34 456666554  888886 66666555432


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      ........+.  +..|.+++.++.|..++.. ++...........+.++...+++. |+.++.++.|..+|.. ++.+..
T Consensus        97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~  171 (330)
T 3hxj_A           97 KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWR  171 (330)
T ss_dssp             ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEE
T ss_pred             CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEE
Confidence            2111112222  6677888889999999988 766654444455566777766665 6667778999999998 777666


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      +.....                  .+.++...+++.+++. +  +.|..|| .   ....+..+......+.++...++|
T Consensus       172 ~~~~~~------------------~~~~~~~d~~g~l~v~-t--~~l~~~d-~---~g~~~~~~~~~~~~~~~~~~~~~g  226 (330)
T 3hxj_A          172 FKTNDA------------------ITSAASIGKDGTIYFG-S--DKVYAIN-P---DGTEKWNFYAGYWTVTRPAISEDG  226 (330)
T ss_dssp             EECSSC------------------CCSCCEECTTCCEEEE-S--SSEEEEC-T---TSCEEEEECCSSCCCSCCEECTTS
T ss_pred             EecCCC------------------ceeeeEEcCCCEEEEE-e--CEEEEEC-C---CCcEEEEEccCCcceeceEECCCC
Confidence            554333                  4666777777765544 4  7899999 5   455566666566678888898887


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-CceeEEE
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-SRLTSIL  323 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-~~i~~~~  323 (444)
                      . |.+++.++.|..++. + ++.+..+......+..+.+.+++ .|..++.+|.|..++. +++.+...... ..+.++.
T Consensus       227 ~-l~v~t~~~gl~~~~~-~-g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~  301 (330)
T 3hxj_A          227 T-IYVTSLDGHLYAINP-D-GTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPV  301 (330)
T ss_dssp             C-EEEEETTTEEEEECT-T-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCE
T ss_pred             e-EEEEcCCCeEEEECC-C-CCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceE
Confidence            5 455666778888874 4 66666666444444556665555 5667788889999996 67766655432 2233333


Q ss_pred             EcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         324 VRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ..         ++ ..+..++.+|.+.+....
T Consensus       302 ~d---------~~-g~l~~gt~~G~~~~~~~~  323 (330)
T 3hxj_A          302 ID---------EN-GTIYFGTRNGKFYALFNL  323 (330)
T ss_dssp             EC---------TT-CCEEEECTTSCEEEEEC-
T ss_pred             Ec---------CC-CEEEEEcCCCeEEEEecc
Confidence            32         22 234446677777765544

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.50  E-value=7.4e-12  Score=116.27  Aligned_cols=227  Identities=9%  Similarity=0.001  Sum_probs=149.9

Q ss_pred             EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC--eEEEEEcCCceeeeee---
Q psy8152          91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN--DLKLWDLNTTKNIFSA---  165 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~---  165 (444)
                      ++++++++++++...++.|++|++.++.... +........ ++|+|+++.|+++..++  .|.+|+...+.....+   
T Consensus       136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~  213 (409)
T 3hrp_A          136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-VHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL  213 (409)
T ss_dssp             EEECSTTEEEEEETTTTEEEEEETTTTEEEE-EEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC
T ss_pred             EEEeCCCCEEEEecCCCcEEEEECCCCEEEE-eeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec
Confidence            4556788877777778999999998776653 333233334 99999999888888765  7888888765433222   


Q ss_pred             ec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-----eCCCCCe--eE
Q psy8152         166 KN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-----DIPDVAL--SC  237 (444)
Q Consensus       166 ~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~i--~~  237 (444)
                      .. ..                  ..+.+++++|++..|+++..++.|+.||..   ... ...+     .+....-  ..
T Consensus       214 ~~~~~------------------~~p~~iav~p~~g~lyv~d~~~~I~~~d~~---~~~-~~~~~~~~~~g~~~~~P~~~  271 (409)
T 3hrp_A          214 GSTFS------------------GKIGAVALDETEEWLYFVDSNKNFGRFNVK---TQE-VTLIKQLELSGSLGTNPGPY  271 (409)
T ss_dssp             CTTSC------------------SCCCBCEECTTSSEEEEECTTCEEEEEETT---TCC-EEEEEECCCCSCCCCSSCCE
T ss_pred             cchhc------------------CCcEEEEEeCCCCeEEEEECCCcEEEEECC---CCC-EEEEecccccCCCCCCcccc
Confidence            01 11                  247889999955555557778899999988   322 2222     1222222  39


Q ss_pred             EEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEecccc---------------CceeEEEecCCCCEEEEEE-CCCcEE
Q psy8152         238 ITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA---------------GCVKDIACPLNENLILSVS-LDRHFR  300 (444)
Q Consensus       238 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~---------------~~i~~~~~s~~~~~l~s~~-~dg~i~  300 (444)
                      ++|+|+ +.++++....+.|+.|+...  . +..+.++.               .....++++|+|+++++-+ .++.|+
T Consensus       272 ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~  348 (409)
T 3hrp_A          272 LIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR  348 (409)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred             EEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence            999995 66666777788999998764  3 33333332               3478999999999777777 789999


Q ss_pred             EEEcCCCceEEEeec---------------CCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         301 VHDFHSKKLLRKDYM---------------QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       301 vw~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .|++.++.......+               -.....+++.++         +.++++....+.|+.+.
T Consensus       349 ~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~---------g~lyVad~~n~~Ir~i~  407 (409)
T 3hrp_A          349 KLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE---------GGYWIAEAWGKAIRKYA  407 (409)
T ss_dssp             EEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS---------SEEEEEESTTCEEEEEE
T ss_pred             EEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC---------CCEEEEECCCCeEEEEE
Confidence            999888775443333               123556666543         35555555555565443

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.50  E-value=1.3e-11  Score=110.24  Aligned_cols=227  Identities=8%  Similarity=-0.014  Sum_probs=147.7

Q ss_pred             CcccceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .+.......+|+ ++++ +++++..++.|..|+. +++. ..+...........+.++|+++++....+.|.+|+.. ++
T Consensus        42 ~~~~~~egp~~~-~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~  117 (305)
T 3dr2_A           42 DQATWSEGPAWW-EAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ  117 (305)
T ss_dssp             CCCSSEEEEEEE-GGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             cCCcCccCCeEe-CCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence            345567889999 6777 5666777899999998 4543 3333222223334556788866665566789999976 54


Q ss_pred             cccccccc-----CCCeEEEEEeccCCEEEE----eeC-------------CCeEEEEEcCCceeeeeeecccceeeEee
Q psy8152         119 DQWTNFNV-----GPQLECMKHNKHSNIIAT----GGK-------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYS  176 (444)
Q Consensus       119 ~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  176 (444)
                      ... +..+     ...+..+++.|+|+++++    |..             .+.|..|+..+++..... ...       
T Consensus       118 ~~~-~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~-------  188 (305)
T 3dr2_A          118 AHL-LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD-------  188 (305)
T ss_dssp             EEE-EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES-------
T ss_pred             EEE-EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC-------
Confidence            332 2211     234678999999998886    432             246777777665543322 211       


Q ss_pred             eCCCcccccCccceeEEEEecCCCEEEEEeCC------ceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEE
Q psy8152         177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ------GYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       177 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~  249 (444)
                                  ....++|+|+++.|+++...      +.|++|++. .........+ .........+++.++|++. +
T Consensus       189 ------------~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v  254 (305)
T 3dr2_A          189 ------------HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR-DGALHDRRHFASVPDGLPDGFCVDRGGWLW-S  254 (305)
T ss_dssp             ------------SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE-TTEEEEEEEEECCSSSCCCSEEECTTSCEE-E
T ss_pred             ------------CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec-CCCccCCeEEEECCCCCCCeEEECCCCCEE-E
Confidence                        36789999999877776654      789999987 1110111111 1123345679999999844 4


Q ss_pred             EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      ++.+ .|.+|+. . ++.+..+..+. .+.+++|+|+++.|+.++.++
T Consensus       255 ~~~~-gv~~~~~-~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          255 SSGT-GVCVFDS-D-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             CCSS-EEEEECT-T-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred             ecCC-cEEEECC-C-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence            4444 4999997 4 67777777544 588999999998888877764

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.50  E-value=5.4e-12  Score=124.98  Aligned_cols=293  Identities=9%  Similarity=0.025  Sum_probs=186.8

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccc--------cE-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG--------DI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~--------~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      +..|++++.++.|+.+|..+|+.+..+.......        .+ ..+...+..|++++.++.|..+|..+++.++....
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~  149 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT  149 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence            5678888888999999999999888775322110        00 12234567888899999999999999998874433


Q ss_pred             c--CCCeEEEEEec--cCCEEEEee------CCCeEEEEEcCCceeeeeeecccce-eeEee-----eCCCcccc-----
Q psy8152         126 V--GPQLECMKHNK--HSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHR-VLVYS-----VKPDEFDL-----  184 (444)
Q Consensus       126 ~--~~~v~~~~~~~--~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~-----  184 (444)
                      .  ......+..+|  .+..+++++      .++.|+.||..+|+.+..+...... .....     ........     
T Consensus       150 ~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~  229 (689)
T 1yiq_A          150 RADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVE  229 (689)
T ss_dssp             CSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHH
T ss_pred             cCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeee
Confidence            1  11111111122  233455554      3689999999999998877532110 00000     00000000     


Q ss_pred             --cCccceeEEEEecCCCEEEEEeCCce-------------------EEEEEcCCCCCccceEEEeC--CC-------CC
Q psy8152         185 --RRPVWVNGISFLPNSDKVAVCSKQGY-------------------VRVYDPKITTQRRPVLKVDI--PD-------VA  234 (444)
Q Consensus       185 --~~~~~i~~~~~~~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~--~~-------~~  234 (444)
                        ........+++.|+..+|++++.++.                   |..||..   +++.+..+..  |.       .+
T Consensus       230 ~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~---TG~~~W~~~~~~~d~wd~~~~~~  306 (689)
T 1yiq_A          230 QGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD---TGEYVWHYQTTPGDAWDYTATQH  306 (689)
T ss_dssp             HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT---TCCEEEEEESSTTCCSCCCCCSC
T ss_pred             cCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc---CCceeEeeecCCcccccccCCCC
Confidence              00001136788998889999888864                   9999999   7777777664  21       11


Q ss_pred             eeEEEEccCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc----------------------------C-------
Q psy8152         235 LSCITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA----------------------------G-------  276 (444)
Q Consensus       235 i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~----------------------------~-------  276 (444)
                      +.......+|+   .|+.++.+|.++++|..+ ++++....-..                            .       
T Consensus       307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~  385 (689)
T 1yiq_A          307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF  385 (689)
T ss_dssp             EEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred             cEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence            11222223564   788999999999999999 98874432100                            0       


Q ss_pred             ----ceeEEEecCCCCEEEEEEC---------------------------------------------CCcEEEEEcCCC
Q psy8152         277 ----CVKDIACPLNENLILSVSL---------------------------------------------DRHFRVHDFHSK  307 (444)
Q Consensus       277 ----~i~~~~~s~~~~~l~s~~~---------------------------------------------dg~i~vw~~~~~  307 (444)
                          .-..++|+|+..+|++...                                             +|.|+.||+.++
T Consensus       386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG  465 (689)
T 1yiq_A          386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ  465 (689)
T ss_dssp             TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred             ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence                0112688888887776532                                             377999999999


Q ss_pred             ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         308 KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      +.+.+..+..+.....+.         ..+.++..++.|+.++.||..+++.+
T Consensus       466 ~~~W~~~~~~~~~~g~~~---------tagglvf~gt~dg~l~a~D~~tG~~l  509 (689)
T 1yiq_A          466 QAAWEVPYVTIFNGGTLS---------TAGNLVFEGSADGRVIAYAADTGEKL  509 (689)
T ss_dssp             EEEEEEEESSSCCCCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CeEeEccCCCCccCccce---------ECCCEEEEECCCCcEEEEECCCCccc
Confidence            998887765554332322         23467788899999999999987765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.49  E-value=4.9e-11  Score=107.48  Aligned_cols=222  Identities=8%  Similarity=-0.078  Sum_probs=145.3

Q ss_pred             ceEEEeeeccC-CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152          44 SVLALNWGNVE-ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQ  120 (444)
Q Consensus        44 ~v~~~~~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~  120 (444)
                      ...+.+|+ ++ +.++++...++.|.+|+..+++.. .+..   ...+.+  ++++++++++. . ..|.+|+..+++..
T Consensus        50 ~~egp~~~-~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~---~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~  122 (326)
T 2ghs_A           50 LGEGPTFD-PASGTAWWFNILERELHELHLASGRKT-VHAL---PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT  122 (326)
T ss_dssp             BEEEEEEE-TTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC---SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred             CCcCCeEe-CCCCEEEEEECCCCEEEEEECCCCcEE-EEEC---CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence            34678899 55 556666667899999999876543 2222   233444  46788776654 4 45999998887754


Q ss_pred             cccccc-----CCCeEEEEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         121 WTNFNV-----GPQLECMKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       121 ~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      . +...     ...+.+++++|+|+++++...      .+.|..++  +++... +.....                  .
T Consensus       123 ~-~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~------------------~  180 (326)
T 2ghs_A          123 L-HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADIS------------------I  180 (326)
T ss_dssp             E-EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEES------------------S
T ss_pred             E-EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCc------------------c
Confidence            2 2211     235889999999987665542      24555555  444322 211111                  3


Q ss_pred             eeEEEEecCCCEEEE-EeCCceEEEEEcC-CCC-Cc---cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         190 VNGISFLPNSDKVAV-CSKQGYVRVYDPK-ITT-QR---RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       190 i~~~~~~~~~~~l~~-~~~d~~i~i~d~~-~~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      ...++|+|+++.|+. .+.++.|.+|++. ..+ ..   +.+..+......+..+++.++|+++++....+.|.+|+. .
T Consensus       181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~  259 (326)
T 2ghs_A          181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D  259 (326)
T ss_dssp             EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred             cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence            678999999986654 4567899999974 111 11   122223233455678999999988777766788999998 5


Q ss_pred             CCcceeEeccccCceeEEEec-CCCCEEEEEECC
Q psy8152         264 KGKPCYKYKGFAGCVKDIACP-LNENLILSVSLD  296 (444)
Q Consensus       264 ~~~~~~~~~~h~~~i~~~~~s-~~~~~l~s~~~d  296 (444)
                       ++.+..+..+...+++++|+ |+++.|+.++..
T Consensus       260 -g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~  292 (326)
T 2ghs_A          260 -GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR  292 (326)
T ss_dssp             -CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             -CCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence             77777777666779999998 888766555443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.48  E-value=4.8e-12  Score=125.08  Aligned_cols=292  Identities=11%  Similarity=0.046  Sum_probs=190.7

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccc---------cEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG---------DIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~---------~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      +..|++++.++.|+.+|..+|+.+..+.......         ....+...+..|++++.++.|..+|..+++.++.+..
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~  156 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT  156 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence            5677778888999999999999887775432110         0112334677888899999999999999998875443


Q ss_pred             c-C----CCeEEEEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeC-------------CCc
Q psy8152         126 V-G----PQLECMKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK-------------PDE  181 (444)
Q Consensus       126 ~-~----~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-------------~~~  181 (444)
                      + .    ..+.+.-.. .+..+++++.      ++.|+.||..+++.+..+.............             .+.
T Consensus       157 ~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~  235 (677)
T 1kb0_A          157 FEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKW  235 (677)
T ss_dssp             TTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCH
T ss_pred             CcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCce
Confidence            3 1    122211111 2445666553      6999999999999998876533210000000             000


Q ss_pred             ccc-cCccceeEEEEecCCCEEEEEeCCc-------------------eEEEEEcCCCCCccceEEEeC--CC-------
Q psy8152         182 FDL-RRPVWVNGISFLPNSDKVAVCSKQG-------------------YVRVYDPKITTQRRPVLKVDI--PD-------  232 (444)
Q Consensus       182 ~~~-~~~~~i~~~~~~~~~~~l~~~~~d~-------------------~i~i~d~~~~~~~~~~~~~~~--~~-------  232 (444)
                      ... ........+++.|++.+|++++.++                   .|..+|..   +++.+..+..  |.       
T Consensus       236 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~---TG~~~W~~~~~~~d~wd~~~~  312 (677)
T 1kb0_A          236 WEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPD---TGKYKWHYQETPGDNWDYTST  312 (677)
T ss_dssp             HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT---TCCEEEEEESSTTCCSCCCCC
T ss_pred             eEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECC---CCCEEEEEecCCCcccccccC
Confidence            000 0001123578899888888887765                   58899988   7777776653  21       


Q ss_pred             CCeeEEEEccCC---CEEEEEcCCCcEEEEEcCCCCcceeEecccc-----------Cce--------------------
Q psy8152         233 VALSCITTTNQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-----------GCV--------------------  278 (444)
Q Consensus       233 ~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-----------~~i--------------------  278 (444)
                      .....+....+|   ..|+.++.+|.|+++|..+ ++++..+....           .++                    
T Consensus       313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G  391 (677)
T 1kb0_A          313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG  391 (677)
T ss_dssp             SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred             CCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence            112223333467   6889999999999999999 99887665211           011                    


Q ss_pred             ----eEEEecCCCCEEEEEECC-------------------------------------------CcEEEEEcCCCceEE
Q psy8152         279 ----KDIACPLNENLILSVSLD-------------------------------------------RHFRVHDFHSKKLLR  311 (444)
Q Consensus       279 ----~~~~~s~~~~~l~s~~~d-------------------------------------------g~i~vw~~~~~~~~~  311 (444)
                          ..++|+|+..++++...+                                           |.|..||+.+++.+.
T Consensus       392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W  471 (677)
T 1kb0_A          392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW  471 (677)
T ss_dssp             SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence                146888988888775432                                           789999999999988


Q ss_pred             EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         312 KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      ++.+..++....+.         ..+..++.++.++.+++||..+++.+
T Consensus       472 ~~~~~~~~~~g~~~---------~~g~~v~~g~~dg~l~a~D~~tG~~l  511 (677)
T 1kb0_A          472 SVEHVSPWNGGTLT---------TAGNVVFQGTADGRLVAYHAATGEKL  511 (677)
T ss_dssp             EEEESSSCCCCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ecCCCCCCcCcceE---------eCCCEEEEECCCCcEEEEECCCCcee
Confidence            88766554443333         22356677789999999999877754

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.41  E-value=1.3e-13  Score=126.45  Aligned_cols=196  Identities=10%  Similarity=0.003  Sum_probs=119.9

Q ss_pred             CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEe
Q psy8152          96 YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVY  175 (444)
Q Consensus        96 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  175 (444)
                      ++.++++++.++.|+.||..+++.++.+..  ..+.+..+..++..+++++.|+.|+.||..+++.+..+..+...    
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~----   81 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE----   81 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH----
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc----
Confidence            578899999999999999999999875544  55666656667778888889999999999988876665432210    


Q ss_pred             eeCCCcccccCcccee-EEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152         176 SVKPDEFDLRRPVWVN-GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                                   .+. +..+. .+..|++++.++.|+.||..   +++.+..+..+.    ...++|.+..|++++.++
T Consensus        82 -------------~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~---tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg  140 (369)
T 2hz6_A           82 -------------LVQASPCRS-SDGILYMGKKQDIWYVIDLL---TGEKQQTLSSAF----ADSLSPSTSLLYLGRTEY  140 (369)
T ss_dssp             -------------HHTTCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEE
T ss_pred             -------------ccccCceEe-cCCEEEEEeCCCEEEEEECC---CCcEEEEecCCC----cccccccCCEEEEEecCC
Confidence                         010 00111 24567788889999999998   677776665443    244567888999999999


Q ss_pred             cEEEEEcCCCCcceeEeccccCceeEEEecCCC---CEEEEEECCCcEEEEEcCCCceEEEeecCCceeE
Q psy8152         255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE---NLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTS  321 (444)
Q Consensus       255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~---~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~  321 (444)
                      .|+.||.++ ++.+..+..+.  ....++.++.   ..+++++.+|.|+.||..+++.+.+.....++..
T Consensus       141 ~v~a~d~~t-G~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~  207 (369)
T 2hz6_A          141 TITMYDTKT-RELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA  207 (369)
T ss_dssp             EEECCCSSS-SSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred             EEEEEECCC-CCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence            999999999 98887775321  2233344432   5677789999999999999999888776666654

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.41  E-value=3.5e-10  Score=104.09  Aligned_cols=268  Identities=13%  Similarity=0.076  Sum_probs=176.6

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccc-------cccE-EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-------EGDI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV  126 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-------~~~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  126 (444)
                      +..|++++.++.|..||..+++.+..+.....       ...+ ......+..+++++.++.|..+|..+++.++.....
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~  132 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA  132 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence            67888888889999999999998877654321       1122 333456778888999999999999999987644332


Q ss_pred             CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe
Q psy8152         127 GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS  206 (444)
Q Consensus       127 ~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  206 (444)
                      .........  .+..+++++.++.|..+|..+++.+...........   ..          ........  +..+++++
T Consensus       133 ~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~---~~----------~~~~~~~~--~~~v~~g~  195 (376)
T 3q7m_A          133 GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLS---LR----------GESAPTTA--FGAAVVGG  195 (376)
T ss_dssp             SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC--------C----------CCCCCEEE--TTEEEECC
T ss_pred             CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCcee---ec----------CCCCcEEE--CCEEEEEc
Confidence            221112222  245788888899999999999998877654332000   00          00112222  35677888


Q ss_pred             CCceEEEEEcCCCCCccceEEEeCCCCC----------e-eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152         207 KQGYVRVYDPKITTQRRPVLKVDIPDVA----------L-SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA  275 (444)
Q Consensus       207 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~----------i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~  275 (444)
                      .++.|..+|..   .++.+.........          + ....+  .+..+++++.++.|..+|..+ ++.+.....  
T Consensus       196 ~~g~l~~~d~~---tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~t-G~~~w~~~~--  267 (376)
T 3q7m_A          196 DNGRVSAVLME---QGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRS-GQIMWKREL--  267 (376)
T ss_dssp             TTTEEEEEETT---TCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTT-CCEEEEECC--
T ss_pred             CCCEEEEEECC---CCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCC-CcEEeeccC--
Confidence            89999999998   66666655432110          1 11111  245778888899999999999 888877652  


Q ss_pred             CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCC-ceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQS-RLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~-~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      .....+..  .+..|+.++.++.|..+|..+++.+.... ... .+......           +..+..++.+|.+.+++
T Consensus       268 ~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-----------~~~l~v~~~~g~l~~~d  334 (376)
T 3q7m_A          268 GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-----------NGNLVVGDSEGYLHWIN  334 (376)
T ss_dssp             CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-----------TTEEEEECTTSEEEEEE
T ss_pred             CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-----------CCEEEEEeCCCeEEEEE
Confidence            23344444  36678888899999999999999877654 222 12222211           24566677788999999


Q ss_pred             CCccccc
Q psy8152         354 PEHFEMN  360 (444)
Q Consensus       354 ~~~~~~~  360 (444)
                      ..+++..
T Consensus       335 ~~tG~~~  341 (376)
T 3q7m_A          335 VEDGRFV  341 (376)
T ss_dssp             TTTCCEE
T ss_pred             CCCCcEE
Confidence            8877654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.40  E-value=5.1e-10  Score=101.90  Aligned_cols=223  Identities=11%  Similarity=0.014  Sum_probs=144.7

Q ss_pred             CCcEEE-EEEcCCeEEEEeCCCC----cccccee---ec---cc-cccEEEEEeCCCeEEEEecC------CcEEEEEcC
Q psy8152          54 EESELL-IAYSGQKIKIYDTDFK----NFNTNTD---VS---FG-EGDIVGVSRYDECILTAVKS------GDVKLWRYK  115 (444)
Q Consensus        54 ~~~~l~-~~~~d~~i~vw~~~~~----~~~~~~~---~~---~~-~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~  115 (444)
                      +.++|+ .+..+++|+|+|+.+.    +..+.+.   +.   +. ...-..+.|+| +++++..+      +.|.++|..
T Consensus        94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred             cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence            455555 4666799999998755    3444331   00   11 11113456888 77766655      789999999


Q ss_pred             CCCcccccccc--C-CCeEEEEEeccCCEEEEee-------------------CCCeEEEEEcCCceeeeeeecccceee
Q psy8152         116 TEPDQWTNFNV--G-PQLECMKHNKHSNIIATGG-------------------KENDLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus       116 ~~~~~~~~~~~--~-~~v~~~~~~~~~~~l~~~~-------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                      +.+.+......  . .--+.+.|+|+++.+++..                   ...+|.+||+.+++.+.++.....   
T Consensus       173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~---  249 (462)
T 2ece_A          173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE---  249 (462)
T ss_dssp             TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---
T ss_pred             CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---
Confidence            99888644422  1 2234688899999888884                   368999999999887777654311   


Q ss_pred             EeeeCCCcccccCccceeEEEE--ecCCCEEEEEe------CCceEEEEEcCCCCCccceEEE--eCC------------
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISF--LPNSDKVAVCS------KQGYVRVYDPKITTQRRPVLKV--DIP------------  231 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~--~~~------------  231 (444)
                                   ......+.|  +|+++++.+++      .+++|.+|... .+.......+  ...            
T Consensus       250 -------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d-~g~~~~~~vIdi~~~~v~~~lp~~~~~  315 (462)
T 2ece_A          250 -------------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE-DGKWNAEKVIEIPAEPLEGNLPEILKP  315 (462)
T ss_dssp             -------------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE-TTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred             -------------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec-CCceeEEEEEeCCCccccccccccccc
Confidence                         012455656  99998877666      56788877665 2222222211  110            


Q ss_pred             ----CCCeeEEEEccCCCEEEEEcC-CCcEEEEEcCCC--CcceeEecccc--------------CceeEEEecCCCCEE
Q psy8152         232 ----DVALSCITTTNQSHYVIVGST-TGDMMAVDLRGK--GKPCYKYKGFA--------------GCVKDIACPLNENLI  290 (444)
Q Consensus       232 ----~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~--~~~~~~~~~h~--------------~~i~~~~~s~~~~~l  290 (444)
                          ......|.++|+|++|+++.. .+.|.+||+..+  .+.+..+.-..              +.-..++++|+|++|
T Consensus       316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L  395 (462)
T 2ece_A          316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV  395 (462)
T ss_dssp             GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred             cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence                234678999999999887554 678999998641  24444444210              125789999999999


Q ss_pred             EEEE
Q psy8152         291 LSVS  294 (444)
Q Consensus       291 ~s~~  294 (444)
                      +++.
T Consensus       396 yVaN  399 (462)
T 2ece_A          396 YVTN  399 (462)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9887

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.39  E-value=2.3e-11  Score=110.48  Aligned_cols=266  Identities=8%  Similarity=-0.015  Sum_probs=160.7

Q ss_pred             cceEEEeeeccCCcEEEEEEc--CCeEEEEeCCCCcccccee-----eccccccEEEE--EeCCCeEEEEec-----CCc
Q psy8152          43 ASVLALNWGNVEESELLIAYS--GQKIKIYDTDFKNFNTNTD-----VSFGEGDIVGV--SRYDECILTAVK-----SGD  108 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~-----~~~~~~~v~~~--s~~~~~l~~~~~-----dg~  108 (444)
                      ..+..++++ ++++.+++...  ++.++||.+.+++.. .+.     ...+-..+.++  .++++++++-..     .+.
T Consensus        17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~   94 (343)
T 2qe8_A           17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK   94 (343)
T ss_dssp             SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred             CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence            678999999 78888888642  343556655444432 111     11233455555  456666555433     578


Q ss_pred             EEEEEcCCCCcccccc------ccCCCeEEEEEeccC-CEEEEee---CCCeEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152         109 VKLWRYKTEPDQWTNF------NVGPQLECMKHNKHS-NIIATGG---KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK  178 (444)
Q Consensus       109 i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  178 (444)
                      |.+||+.+++.+..+.      .+...+..+++++++ ..+++..   .++.|.+||+.+++....+..+..      +.
T Consensus        95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~------~~  168 (343)
T 2qe8_A           95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG------IA  168 (343)
T ss_dssp             EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT------TS
T ss_pred             EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc------cc
Confidence            9999999887553222      123456899999854 4445544   578999999998876655543222      00


Q ss_pred             CCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-cEE
Q psy8152         179 PDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-DMM  257 (444)
Q Consensus       179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~  257 (444)
                                 .....+.+++..+.+...++.++.|..                 .+..|+|+|++++|+++...+ .|+
T Consensus       169 -----------~~~~~~~~~g~~~~~~~~~g~~~~~~~-----------------~~~gia~s~dg~~ly~~~~~~~~l~  220 (343)
T 2qe8_A          169 -----------PEDIDLVIDGVPVQIGQPDGTVIRPHL-----------------GVNGIVLDAENEWLYLSPMHSTSMY  220 (343)
T ss_dssp             -----------CCSCCCEETTEECBEECTTSCEECCCC-----------------CEEEEEECTTSCEEEEEESSCSEEE
T ss_pred             -----------ccccceeECCEEEEeccCCCceeceec-----------------ccceeEeccCCCEEEEEeCCCCeEE
Confidence                       001334456666666666666654421                 257899999999888876665 455


Q ss_pred             EEEcCC--CCc-----cee--EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec--CCceeEEEEcC
Q psy8152         258 AVDLRG--KGK-----PCY--KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM--QSRLTSILVRS  326 (444)
Q Consensus       258 iwd~~~--~~~-----~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~--~~~i~~~~~~~  326 (444)
                      .++...  .+.     ...  ...++.+....++++++|.++++....+.|.+|+..+++.......  ...+.++++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~  300 (343)
T 2qe8_A          221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGS  300 (343)
T ss_dssp             EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECT
T ss_pred             EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECC
Confidence            554321  011     111  1123444567899999999999988899999999856664333222  34567888764


Q ss_pred             CCcccccchhhhhccccccCCCccccC
Q psy8152         327 DFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       327 ~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      +         +.+.++.+..+.+.+|.
T Consensus       301 ~---------g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          301 D---------GYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             T---------SCEEEEECCGGGSGGGB
T ss_pred             C---------CcEEEEeCccccccccc
Confidence            3         34555555444444443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.38  E-value=2.5e-10  Score=112.80  Aligned_cols=293  Identities=13%  Similarity=0.102  Sum_probs=184.8

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccC-----cc-cce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYIT-----NK-ASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~-----h~-~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      +..|++++.++.|+.+|..+++..-+ +. .....     +. ..+ ..+++.   +..|++++.++.|+.+|..+|+.+
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~  140 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWR-YD-PEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAI  140 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEE-EC-CCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceE-EC-CCCCccccccccccCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEe
Confidence            46788888899999999988885211 11 11000     00 001 122333   568888899999999999999998


Q ss_pred             cceeecccc--ccEEE-EEeCCCeEEEEec------CCcEEEEEcCCCCcccccccc-----------------------
Q psy8152          79 TNTDVSFGE--GDIVG-VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNV-----------------------  126 (444)
Q Consensus        79 ~~~~~~~~~--~~v~~-~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~-----------------------  126 (444)
                      ..+......  ..+.+ -...+..++++..      +|.|+.+|..+++.++.+...                       
T Consensus       141 W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  220 (668)
T 1kv9_A          141 WSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD  220 (668)
T ss_dssp             EEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred             eeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence            877642111  01100 0012445555543      589999999999988744311                       


Q ss_pred             --------CCCeEEEEEeccCCEEEEeeCCC-------------------eEEEEEcCCceeeeeeecccceeeEeeeCC
Q psy8152         127 --------GPQLECMKHNKHSNIIATGGKEN-------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKP  179 (444)
Q Consensus       127 --------~~~v~~~~~~~~~~~l~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (444)
                              ......+++.|...+++.++.++                   .|..+|..+++.+..++...+         
T Consensus       221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~---------  291 (668)
T 1kv9_A          221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPG---------  291 (668)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT---------
T ss_pred             ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCC---------
Confidence                    01112468888778888887765                   399999999999888765432         


Q ss_pred             CcccccCccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC------------C-----------
Q psy8152         180 DEFDLRRPVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD------------V-----------  233 (444)
Q Consensus       180 ~~~~~~~~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------------~-----------  233 (444)
                      +..+.....++....+..+++   .++.++.+|.++++|..   +++.+.......            .           
T Consensus       292 ~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~  368 (668)
T 1kv9_A          292 DSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT---NGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEK  368 (668)
T ss_dssp             CCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSS
T ss_pred             ccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECC---CCCEeccccccccccccccccccCCccccccccccC
Confidence            000100111222223334664   68899999999999988   555553322111            0           


Q ss_pred             -------------CeeEEEEccCCCEEEEE------------------------------------cCCCcEEEEEcCCC
Q psy8152         234 -------------ALSCITTTNQSHYVIVG------------------------------------STTGDMMAVDLRGK  264 (444)
Q Consensus       234 -------------~i~~~~~~~~~~~l~~~------------------------------------~~dg~i~iwd~~~~  264 (444)
                                   .-..++++|+..++++.                                    ..+|.|+.||+.+ 
T Consensus       369 ~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t-  447 (668)
T 1kv9_A          369 EPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-  447 (668)
T ss_dssp             SCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-
T ss_pred             CeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC-
Confidence                         01126788876665541                                    1237899999999 


Q ss_pred             CcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC
Q psy8152         265 GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS  317 (444)
Q Consensus       265 ~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~  317 (444)
                      ++.+.++..+ .++....+...+.+++.++.++.|++||..+++.+.++....
T Consensus       448 G~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~  499 (668)
T 1kv9_A          448 QKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS  499 (668)
T ss_dssp             TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             CcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence            9998887643 233333444567889999999999999999999998876443

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.37  E-value=3.1e-13  Score=123.98  Aligned_cols=223  Identities=13%  Similarity=0.048  Sum_probs=125.2

Q ss_pred             CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCC-CeE-
Q psy8152          54 EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGP-QLE-  131 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~v~-  131 (444)
                      .+..|++++.|+.|+.||..+|+.+..+.. + ......+..++..+++++.++.|+.||..+++.++....+.. .+. 
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~-~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D-PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C-CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C-CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            478899999999999999999999888764 1 111112345677788888999999999998887653322211 111 


Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV  211 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  211 (444)
                      +..+. .+..+++++.++.|+.||..+|+.+..+..+..                      ..++|.+..+++++.++.|
T Consensus        86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----------------------~~~~p~~~~v~~~~~dg~v  142 (369)
T 2hz6_A           86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----------------------DSLSPSTSLLYLGRTEYTI  142 (369)
T ss_dssp             CSCC------CCCCEEEEEEEEECCC--------------------------------------------EEEEEEEEEE
T ss_pred             CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----------------------ccccccCCEEEEEecCCEE
Confidence            01111 345778888899999999999998877654322                      2345677889999999999


Q ss_pred             EEEEcCCCCCccceEEEeCCCCCeeEEEEccCC---CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCC
Q psy8152         212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNE  287 (444)
Q Consensus       212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~  287 (444)
                      +.||.+   +++.+..+..+.  ....++.++.   ..+++++.+|.|+.||..+ ++.+.++.. ..++.. ..+++++
T Consensus       143 ~a~d~~---tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t-G~~~W~~~~-~~pv~~~~~~~~dg  215 (369)
T 2hz6_A          143 TMYDTK---TRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES-GDVLWIQNY-ASPVVAFYVWQREG  215 (369)
T ss_dssp             ECCCSS---SSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT-CCEEEEEEC-SSCEEEEEECTTSS
T ss_pred             EEEECC---CCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCC-CcEEEEecC-CCceEEEEEecCCc
Confidence            999998   555555443211  1223333322   4677788999999999999 998888773 344443 4555666


Q ss_pred             CEEEE--EECCCcEEEEEcCCCc
Q psy8152         288 NLILS--VSLDRHFRVHDFHSKK  308 (444)
Q Consensus       288 ~~l~s--~~~dg~i~vw~~~~~~  308 (444)
                      ...+.  ...++.+++++..+|+
T Consensus       216 ~~~v~~~~~~~~~l~~ld~~tG~  238 (369)
T 2hz6_A          216 LRKVMHINVAVETLRYLTFMSGE  238 (369)
T ss_dssp             CEEECCEEEEHHHHHHHHHHHHH
T ss_pred             eEeccceeecccceeeeehhcCC
Confidence            43211  0114456677776666

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.36  E-value=9.5e-11  Score=106.41  Aligned_cols=229  Identities=7%  Similarity=-0.051  Sum_probs=146.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEc-----CCeEEEEeCCCCccccceeeccc----cc--cEEEEEeCCCeE-EEEe---
Q psy8152          40 TNKASVLALNWGNVEESELLIAYS-----GQKIKIYDTDFKNFNTNTDVSFG----EG--DIVGVSRYDECI-LTAV---  104 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~~~~~~~----~~--~v~~~s~~~~~l-~~~~---  104 (444)
                      .|-..+.+|++. +++.++++-..     .+.|.+||+.+++.+..+..+..    ..  .-..+++++..+ ++..   
T Consensus        64 ~~~~~p~gv~~d-~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~  142 (343)
T 2qe8_A           64 ITFDTVLGIKSD-GNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD  142 (343)
T ss_dssp             CCCSCEEEEEEC-SSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred             cceeEeeEEEEc-CCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence            466789999999 67776665443     57999999998887766654311    11  224456655454 5544   


Q ss_pred             cCCcEEEEEcCCCCccccccccCCCeE-EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc
Q psy8152         105 KSGDVKLWRYKTEPDQWTNFNVGPQLE-CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD  183 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (444)
                      .++.|.+|++.+++....+..|..... ...+.+++..+.+.+.++.++.|.              .             
T Consensus       143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~-------------  195 (343)
T 2qe8_A          143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------L-------------  195 (343)
T ss_dssp             GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------C-------------
T ss_pred             CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------c-------------
Confidence            678999999988876643333322111 134455676676677777665442              1             


Q ss_pred             ccCccceeEEEEecCCCEEEEEeCCc-eEEEEEcCC--CCC---ccce--EEEeCCCCCeeEEEEccCCCEEEEEcCCCc
Q psy8152         184 LRRPVWVNGISFLPNSDKVAVCSKQG-YVRVYDPKI--TTQ---RRPV--LKVDIPDVALSCITTTNQSHYVIVGSTTGD  255 (444)
Q Consensus       184 ~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~--~~~---~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  255 (444)
                           .+..|+|+|+++.|+++...+ .|..++...  ...   ....  ....++......++++++|+++++....+.
T Consensus       196 -----~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~  270 (343)
T 2qe8_A          196 -----GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSA  270 (343)
T ss_dssp             -----CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTE
T ss_pred             -----ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCe
Confidence                 267899999998888776655 555555320  000   0000  011123335678999999999999999999


Q ss_pred             EEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         256 MMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       256 i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      |.+||... ++....... +...+++++|.+++.++++.+..+.+.+|
T Consensus       271 V~~~d~~~-G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f  317 (343)
T 2qe8_A          271 IGVITSAD-RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL  317 (343)
T ss_dssp             EEEEETTT-TEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred             EEEEECCC-CCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence            99999855 654333322 24568899999998888777655544433

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.35  E-value=8e-10  Score=99.50  Aligned_cols=212  Identities=10%  Similarity=0.048  Sum_probs=136.5

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      .+..++++...+.|..|+..+++.     ..+   .+...|.+++|+ ++++++++. . ..|.+|+..+++........
T Consensus        60 ~~~l~~~d~~~~~i~~~d~~~~~~-----~~~---~~~~~v~~i~~~-~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~  128 (326)
T 2ghs_A           60 SGTAWWFNILERELHELHLASGRK-----TVH---ALPFMGSALAKI-SDSKQLIAS-D-DGLFLRDTATGVLTLHAELE  128 (326)
T ss_dssp             TTEEEEEEGGGTEEEEEETTTTEE-----EEE---ECSSCEEEEEEE-ETTEEEEEE-T-TEEEEEETTTCCEEEEECSS
T ss_pred             CCEEEEEECCCCEEEEEECCCCcE-----EEE---ECCCcceEEEEe-CCCeEEEEE-C-CCEEEEECCCCcEEEEeeCC
Confidence            356677777889999999887652     112   124579999999 677766654 4 45999999887754332211


Q ss_pred             c-c-cccEEE--EEeCCCeEEEEec------CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe-eCCCeEEE
Q psy8152          85 F-G-EGDIVG--VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG-GKENDLKL  153 (444)
Q Consensus        85 ~-~-~~~v~~--~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v  153 (444)
                      . . ...+..  ++++|+++++...      .+.|..++  +++.. .+..+......++|+|+++.|+.+ +.++.|.+
T Consensus       129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~  205 (326)
T 2ghs_A          129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMR  205 (326)
T ss_dssp             TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred             CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence            1 1 123444  4678887665432      23455555  44433 233334457899999999876554 45789999


Q ss_pred             EEcC--Cc-ee-----eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce
Q psy8152         154 WDLN--TT-KN-----IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV  225 (444)
Q Consensus       154 wd~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  225 (444)
                      |++.  ++ ..     +..+....                  ..+..+++.++|+++++....+.|.+|+..    ...+
T Consensus       206 ~d~~~~~Gl~~~~~~~~~~~~~~~------------------~~p~gi~~d~~G~lwva~~~~~~v~~~d~~----g~~~  263 (326)
T 2ghs_A          206 VPLDARTGLPTGKAEVFIDSTGIK------------------GGMDGSVCDAEGHIWNARWGEGAVDRYDTD----GNHI  263 (326)
T ss_dssp             EEBCTTTCCBSSCCEEEEECTTSS------------------SEEEEEEECTTSCEEEEEETTTEEEEECTT----CCEE
T ss_pred             EEcccccCCcccCceEEEECCCCC------------------CCCCeeEECCCCCEEEEEeCCCEEEEECCC----CCEE
Confidence            9986  44 31     11111111                  146789999999888777677899999876    3455


Q ss_pred             EEEeCCCCCeeEEEEc-cCCCEEEEEcC
Q psy8152         226 LKVDIPDVALSCITTT-NQSHYVIVGST  252 (444)
Q Consensus       226 ~~~~~~~~~i~~~~~~-~~~~~l~~~~~  252 (444)
                      ..+..+...+++++|+ |+++.|++++.
T Consensus       264 ~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          264 ARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             EEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             EEEECCCCCcEEEEEecCCCCEEEEEec
Confidence            5666666679999998 88777655443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.35  E-value=2.3e-11  Score=110.19  Aligned_cols=254  Identities=9%  Similarity=-0.042  Sum_probs=169.1

Q ss_pred             eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEEEcCCCCcccccccc-------CC
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLWRYKTEPDQWTNFNV-------GP  128 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~-------~~  128 (444)
                      +|.++|..+++.+..+.... . +-..++|++++++++.          .++.|.+||+.+++.+..+.-.       ..
T Consensus        47 ~vsvID~~t~~v~~~i~vG~-~-P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~  124 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAF-L-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP  124 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECT-T-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred             eEEEEECCCCeEEEEEeCCC-C-CceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence            88899999999999887533 3 3678899999988886          3688999999999988754322       13


Q ss_pred             CeEEEEEeccCCEEEEeeC--CCeEEE--EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEE
Q psy8152         129 QLECMKHNKHSNIIATGGK--ENDLKL--WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVA  203 (444)
Q Consensus       129 ~v~~~~~~~~~~~l~~~~~--d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~  203 (444)
                      ....++++|++++|+++..  .+.|.+  +|+.+   +..+.. ..                   .  +.+.|++ ..++
T Consensus       125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~-------------------~--~~~~p~g~~~~~  179 (368)
T 1mda_H          125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-AS-------------------C--FHIHPGAAATHY  179 (368)
T ss_dssp             CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SS-------------------C--CCCEEEETTEEE
T ss_pred             CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CC-------------------c--eEEccCCCeEEE
Confidence            4668999999999998864  467888  88876   333321 11                   1  1223444 4555


Q ss_pred             EEeCCceEEEEEcCCCC--CccceE----EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC--cceeEecc--
Q psy8152         204 VCSKQGYVRVYDPKITT--QRRPVL----KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG--KPCYKYKG--  273 (444)
Q Consensus       204 ~~~~d~~i~i~d~~~~~--~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~--  273 (444)
                      +.+.|+.+.+.++....  ..+.+.    .+.....+.   . .+++..++..+. +.+.+.|+.. .  +.+..+.-  
T Consensus       180 ~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~-~~~~v~~~~~~~~  253 (368)
T 1mda_H          180 LGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPA-AGATMKAAIDGNE  253 (368)
T ss_dssp             CCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCS-SCCEEECCCCSSC
T ss_pred             EEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCC-CcceEEEEEEecc
Confidence            66778888888887100  022211    011122333   3 556666666556 9999999864 3  22222211  


Q ss_pred             -----c---cCceeEEEecCCCCEEEEEEC---------CCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchh
Q psy8152         274 -----F---AGCVKDIACPLNENLILSVSL---------DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKK  336 (444)
Q Consensus       274 -----h---~~~i~~~~~s~~~~~l~s~~~---------dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  336 (444)
                           +   ......++|+|++++++.+..         .+.+.++|+.+++.+.++........++|+++         
T Consensus       254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~D---------  324 (368)
T 1mda_H          254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQD---------  324 (368)
T ss_dssp             THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCS---------
T ss_pred             ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCC---------
Confidence                 0   111222689999988776543         23567999999999999887778899998865         


Q ss_pred             hh-hccccc-cCCCccccCCCcccccc
Q psy8152         337 EE-QEHSEE-KGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       337 ~~-~~~s~~-~d~~i~~W~~~~~~~~~  361 (444)
                      ++ ++++.. .++.|.++|+.+.+...
T Consensus       325 g~~l~va~~~~~~~VsVID~~t~kvv~  351 (368)
T 1mda_H          325 GASDNYANSAGTEVLDIYDAASDQDQS  351 (368)
T ss_dssp             SSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred             CCEEEEEccCCCCeEEEEECCCCcEEE
Confidence            34 455555 58999999999877554

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.35  E-value=7.1e-11  Score=117.72  Aligned_cols=234  Identities=11%  Similarity=0.092  Sum_probs=144.6

Q ss_pred             EEEEeCCCeEEEEe-----cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC-------------eEE
Q psy8152          91 VGVSRYDECILTAV-----KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN-------------DLK  152 (444)
Q Consensus        91 ~~~s~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~  152 (444)
                      .++||+|++|+.+.     ....|++||+.+++.+.. .........++|+ +++.|+.++.+.             .|+
T Consensus       134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~  211 (693)
T 3iuj_A          134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVY  211 (693)
T ss_dssp             EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEE
T ss_pred             EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEE
Confidence            35789999887543     235799999999986642 1111113578999 999999888774             399


Q ss_pred             EEEcCCce----eeeeeec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCcc
Q psy8152         153 LWDLNTTK----NIFSAKN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRR  223 (444)
Q Consensus       153 vwd~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~  223 (444)
                      +|++.++.    .+..... +..                  ++.++.|+|++++|+....    ...|+++|+. .. ..
T Consensus       212 ~~~lgt~~~~~~~v~~~~~~~~~------------------~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~-~~-~~  271 (693)
T 3iuj_A          212 FHRLGTAQEDDRLVFGAIPAQHH------------------RYVGATVTEDDRFLLISAANSTSGNRLYVKDLS-QE-NA  271 (693)
T ss_dssp             EEETTSCGGGCEEEESCSGGGCC------------------SEEEEEECTTSCEEEEEEESSSSCCEEEEEETT-ST-TC
T ss_pred             EEECCCCcccceEEEecCCCCCe------------------EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC-CC-CC
Confidence            99988754    3333322 222                  5778999999988764432    3589999997 11 12


Q ss_pred             ceEEEeCCCCCeeEEEEccCCCEEE-EEcCC---CcEEEEEcCCCCcc--eeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152         224 PVLKVDIPDVALSCITTTNQSHYVI-VGSTT---GDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLNENLILSVSLDR  297 (444)
Q Consensus       224 ~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d---g~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg  297 (444)
                      ....+..+....... |++++..|+ ....+   +.|.++++.+ +..  ...+..|...+.  .|++++++|+....++
T Consensus       272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~  347 (693)
T 3iuj_A          272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN-PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD  347 (693)
T ss_dssp             CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS-CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred             ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC-CCccccEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence            344555565555554 666665554 44433   5799999987 544  355666666555  8889998777665543


Q ss_pred             ---cEEEEEcCCCceEEEeecC--CceeEEEEcCCCcccccchhhhhccccc----cCCCccccCCCccccc
Q psy8152         298 ---HFRVHDFHSKKLLRKDYMQ--SRLTSILVRSDFSLENETKKEEQEHSEE----KGDSDEKYDPEHFEMN  360 (444)
Q Consensus       298 ---~i~vw~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~s~~----~d~~i~~W~~~~~~~~  360 (444)
                         .|++|++..+. ...+...  ..+..+.++         +++..++...    .-+++..|++.+++..
T Consensus       348 g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~---------~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~  409 (693)
T 3iuj_A          348 ATARVEQFDYEGKR-VREVALPGLGSVSGFNGK---------HDDPALYFGFENYAQPPTLYRFEPKSGAIS  409 (693)
T ss_dssp             TEEEEEEECTTSCE-EEEECCSSSSEEEECCCC---------TTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred             CeeEEEEEECCCCe-eEEeecCCCceEEeeecC---------CCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence               68899987544 3444322  223333222         2223333222    2267888887665443

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.35  E-value=1e-09  Score=106.13  Aligned_cols=294  Identities=16%  Similarity=0.165  Sum_probs=181.0

Q ss_pred             cccEEEecC-CCcEEEEEc-CCCccceeeeeeeccc-C-cc-----cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152           6 DYNIYIGSS-TGAFKGVNL-SKDKCIIKNIQNVKYI-T-NK-----ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN   76 (444)
Q Consensus         6 ~~~l~~g~~-dg~i~i~~~-~~~~~~~~~~~~~~~~-~-h~-----~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~   76 (444)
                      +..|++++. ++.|+.+|. .+++..-.  ..+... . +.     ..-..+++.   +..|++++.++.|..+|..+|+
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~  136 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQ--HKPKQDASTKAVMCCDVVDRGLAYG---AGQIVKKQANGHLLALDAKTGK  136 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEE--ECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEE--EcCCCCccccccccccccccccEEE---CCEEEEEeCCCEEEEEECCCCC
Confidence            456777777 899999999 88874211  111100 0 00     000122333   6788888889999999999999


Q ss_pred             cccceeeccccc--cEEE-EEeCCCeEEEEec------CCcEEEEEcCCCCccccccccCCC------------------
Q psy8152          77 FNTNTDVSFGEG--DIVG-VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNVGPQ------------------  129 (444)
Q Consensus        77 ~~~~~~~~~~~~--~v~~-~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~------------------  129 (444)
                      .+..+....+..  .+.+ ....+..+++++.      ++.|+.+|..+++.++.+......                  
T Consensus       137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~  216 (571)
T 2ad6_A          137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ  216 (571)
T ss_dssp             EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred             EEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence            887765433211  1110 0012445565654      789999999999887633221100                  


Q ss_pred             --------------------eEEEEEeccCCEEEEeeCC----------------CeEEEEEcCCceeeeeeecccceee
Q psy8152         130 --------------------LECMKHNKHSNIIATGGKE----------------NDLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus       130 --------------------v~~~~~~~~~~~l~~~~~d----------------~~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                                          ...+++.+....++.++.+                +.|..+|..+++.+..++...+   
T Consensus       217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~---  293 (571)
T 2ad6_A          217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH---  293 (571)
T ss_dssp             SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT---
T ss_pred             cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC---
Confidence                                0235666755666665532                3699999999998887764322   


Q ss_pred             EeeeCCCcccccC-ccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC-------------CCe-
Q psy8152         174 VYSVKPDEFDLRR-PVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-------------VAL-  235 (444)
Q Consensus       174 ~~~~~~~~~~~~~-~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~~i-  235 (444)
                            +..+... ..++. +...++|+   .++.++.+|.++++|..   +++.+..+....             .++ 
T Consensus       294 ------d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~~w~~~~~~~~~w~~~~d~~~g~p~~  363 (571)
T 2ad6_A          294 ------DEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRE---NGNLIVAEKVDPAVNVFKKVDLKTGTPVR  363 (571)
T ss_dssp             ------CSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETT---TCCEEEEEESSTTCCSEEEECTTTCSEEE
T ss_pred             ------cccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECC---CCCEEeeecccCCccccccccccCCceec
Confidence                  0000000 01121 22334673   57788899999999988   555555543221             111 


Q ss_pred             -------------------------eEEEEccCCCEEEEEc-------------------------------------CC
Q psy8152         236 -------------------------SCITTTNQSHYVIVGS-------------------------------------TT  253 (444)
Q Consensus       236 -------------------------~~~~~~~~~~~l~~~~-------------------------------------~d  253 (444)
                                               ..++++|+..+|++..                                     .+
T Consensus       364 ~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  443 (571)
T 2ad6_A          364 DPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEM  443 (571)
T ss_dssp             CGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCC
T ss_pred             ccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCC
Confidence                                     2467888877776643                                     35


Q ss_pred             CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152         254 GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       254 g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i  319 (444)
                      |.|+.||+.+ ++.+.++... ..+....+...+.+++.++.|+.|++||..+++++.++.....+
T Consensus       444 g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~  507 (571)
T 2ad6_A          444 GQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG  507 (571)
T ss_dssp             EEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred             CeEEEEECCC-CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc
Confidence            7899999999 9988887632 23333333334667888999999999999999999888755443

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.34  E-value=3.2e-10  Score=101.16  Aligned_cols=210  Identities=10%  Similarity=-0.002  Sum_probs=138.4

Q ss_pred             EEEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152          91 VGVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus        91 ~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      ..++++++ ++++...++.|..|+. +++.. .+..+...+..++++++++++++....+.|.+|+.. ++.........
T Consensus        50 p~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~-~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~  126 (305)
T 3dr2_A           50 PAWWEAQRTLVWSDLVGRRVLGWRE-DGTVD-VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA  126 (305)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEET-TSCEE-EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEET
T ss_pred             CeEeCCCCEEEEEECCCCEEEEEeC-CCCEE-EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccC
Confidence            44578888 5677777899999997 45433 345566778999999999877766666889999986 44322111111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEE----EeC-------------CceEEEEEcCCCCCccceEEEeCCC
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV----CSK-------------QGYVRVYDPKITTQRRPVLKVDIPD  232 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~  232 (444)
                      .              .....++.+++.|+|+++++    |..             .+.|..|+..   ...... +. ..
T Consensus       127 ~--------------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~---~g~~~~-~~-~~  187 (305)
T 3dr2_A          127 G--------------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD---GSPLQR-MA-DL  187 (305)
T ss_dssp             T--------------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS---SCCCEE-EE-EE
T ss_pred             C--------------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC---CCcEEE-Ee-cC
Confidence            1              00113678999999998886    332             2567777765   232222 22 33


Q ss_pred             CCeeEEEEccCCCEEEEEcCC------CcEEEEEcCCCCcceeE---ec-cccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         233 VALSCITTTNQSHYVIVGSTT------GDMMAVDLRGKGKPCYK---YK-GFAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~---~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      .....++|+|+++.|+++...      +.|++|++.. .. +..   +. ...+....+++.++|++.++ +.+ .|.+|
T Consensus       188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~  263 (305)
T 3dr2_A          188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD-GA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVF  263 (305)
T ss_dssp             SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET-TE-EEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEE
T ss_pred             CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC-CC-ccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEE
Confidence            446789999999988776554      6899999876 43 211   11 12344567899999995544 444 49999


Q ss_pred             EcCCCceEEEeecCCceeEEEEcCC
Q psy8152         303 DFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                      +. .++.+..+.....+.+++|.++
T Consensus       264 ~~-~g~~~~~~~~~~~~~~~~f~~d  287 (305)
T 3dr2_A          264 DS-DGQLLGHIPTPGTASNCTFDQA  287 (305)
T ss_dssp             CT-TSCEEEEEECSSCCCEEEECTT
T ss_pred             CC-CCCEEEEEECCCceeEEEEeCC
Confidence            98 5777777766667888888743

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.30  E-value=5.1e-09  Score=101.22  Aligned_cols=295  Identities=15%  Similarity=0.123  Sum_probs=178.4

Q ss_pred             cccEEEecC-CCcEEEEEc-CCCccceeeeeeecccCcc-------cceEEEeeeccCCcE----EEEEEcCCeEEEEeC
Q psy8152           6 DYNIYIGSS-TGAFKGVNL-SKDKCIIKNIQNVKYITNK-------ASVLALNWGNVEESE----LLIAYSGQKIKIYDT   72 (444)
Q Consensus         6 ~~~l~~g~~-dg~i~i~~~-~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~----l~~~~~d~~i~vw~~   72 (444)
                      +..|++++. ++.|+.+|. .+++..-+.  ........       .....++++ |.+..    |++++.++.|..+|.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~--~~~~~~~~~~~~~~~~~~~g~av~-p~~g~~~~rV~v~t~dg~l~AlDa  138 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQD--KPKQNPAARAVACCDLVNRGLAYW-PGDGKTPALILKTQLDGNVAALNA  138 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEE--CCCCCGGGGGGCSSCSCCCCCEEE-CCCSSSCCEEEEECTTSEEEEEET
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEE--CCCCCccccccccccccccceEEE-ecCCcceeEEEEEcCCCEEEEEEC
Confidence            456777877 899999999 888742111  11100000       011234553 23444    888989999999999


Q ss_pred             CCCccccceeeccccc--cEEE-EEeCCCeEEEEe------cCCcEEEEEcCCCCccccccccCCC--------------
Q psy8152          73 DFKNFNTNTDVSFGEG--DIVG-VSRYDECILTAV------KSGDVKLWRYKTEPDQWTNFNVGPQ--------------  129 (444)
Q Consensus        73 ~~~~~~~~~~~~~~~~--~v~~-~s~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~--------------  129 (444)
                      .+|+.+.......+..  .+.+ -...+..+++++      .++.|+.+|..+++.++.+......              
T Consensus       139 ~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~  218 (599)
T 1w6s_A          139 ETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP  218 (599)
T ss_dssp             TTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred             CCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence            9999887765432111  1110 001234555554      3789999999999987633321110              


Q ss_pred             -----------------------e-EEEEEeccCCEEEEeeCC----------------CeEEEEEcCCceeeeeeeccc
Q psy8152         130 -----------------------L-ECMKHNKHSNIIATGGKE----------------NDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus       130 -----------------------v-~~~~~~~~~~~l~~~~~d----------------~~i~vwd~~~~~~~~~~~~~~  169 (444)
                                             + ..+++.+...+++.++.+                +.|..+|..+++.+..++...
T Consensus       219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~  298 (599)
T 1w6s_A          219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP  298 (599)
T ss_dssp             GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred             cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence                                   1 134666766777777654                389999999999988776544


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEe-cCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-------------
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFL-PNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-------------  232 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------  232 (444)
                      +         +..+........-+... .+|   ..++.++.+|.++++|..   +++.+.......             
T Consensus       299 ~---------d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~lw~~~~~~~~~~~~~~~~~~g  366 (599)
T 1w6s_A          299 H---------DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRT---DGALVSANKLDDTVNVFKSVDLKTG  366 (599)
T ss_dssp             T---------CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETT---TCCEEEEEESSTTCCSEEEECTTTC
T ss_pred             C---------ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECC---CCCEeecccccCCcccccccccCCC
Confidence            3         10000000011112222 456   467778899999999988   565555443211             


Q ss_pred             CC--------------------------eeEEEEccCCCEEEEE---------------------------------c--
Q psy8152         233 VA--------------------------LSCITTTNQSHYVIVG---------------------------------S--  251 (444)
Q Consensus       233 ~~--------------------------i~~~~~~~~~~~l~~~---------------------------------~--  251 (444)
                      .+                          -..++++|+..++++.                                 +  
T Consensus       367 ~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~  446 (599)
T 1w6s_A          367 QPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDR  446 (599)
T ss_dssp             CEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBT
T ss_pred             ceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCc
Confidence            11                          1245677766555442                                 1  


Q ss_pred             ----CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC
Q psy8152         252 ----TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS  317 (444)
Q Consensus       252 ----~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~  317 (444)
                          ..|.|..||+.+ ++.+.+.+. ..++..-.+...+.+++.++.|+.|+.||..+|+++.++....
T Consensus       447 ~~~~~~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~  514 (599)
T 1w6s_A          447 QNYEGLGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS  514 (599)
T ss_dssp             TTTBCCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             ccCCCcCeEEEEECCC-CCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence                347899999999 888887752 2222211122346678889999999999999999999876543

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.30  E-value=4.2e-10  Score=101.45  Aligned_cols=254  Identities=14%  Similarity=0.080  Sum_probs=161.0

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +..|++++.+  |..++. +++. .   ....  .+........+.   +..|++++.++.|..++.. ++....+... 
T Consensus        70 ~g~l~v~t~~--l~~~d~-~g~~-~---~~~~--~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~-  135 (330)
T 3hxj_A           70 DGTIYFGSDK--VYAINP-DGTE-K---WRFD--TKKAIVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTK-  135 (330)
T ss_dssp             TTEECCSSCE--EEEECC-CGGG-G---GGSC--C-----CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECS-
T ss_pred             CCcEEEecCc--EEEECC-CCcE-E---EEEE--CCCCcccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCC-
Confidence            4567777665  777775 3332 1   1111  111122223333   5678888888999999988 7765554422 


Q ss_pred             ccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152          86 GEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        86 ~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                       ...+.+  +.+++ .|+.++.++.|..++.. ++...........+.++.+.+++.+++. +  +.|..+| .+++.+.
T Consensus       136 -~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~  208 (330)
T 3hxj_A          136 -KAIYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKW  208 (330)
T ss_dssp             -SCCCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEE
T ss_pred             -CceeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEE
Confidence             222222  23344 46668888999999988 7766544444556777777777765544 4  7899999 6777666


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      .......                  .+.++...+++. |.+++.++.|..++..    ...+..+......+..+.+.++
T Consensus       209 ~~~~~~~------------------~~~~~~~~~~g~-l~v~t~~~gl~~~~~~----g~~~~~~~~~~~~~~~~~~~~~  265 (330)
T 3hxj_A          209 NFYAGYW------------------TVTRPAISEDGT-IYVTSLDGHLYAINPD----GTEKWRFKTGKRIESSPVIGNT  265 (330)
T ss_dssp             EECCSSC------------------CCSCCEECTTSC-EEEEETTTEEEEECTT----SCEEEEEECSSCCCSCCEECTT
T ss_pred             EEccCCc------------------ceeceEECCCCe-EEEEcCCCeEEEECCC----CCEeEEeeCCCCccccceEcCC
Confidence            5543333                  477788887765 4556677788888744    4455555555444556666656


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      + .|++++.+|.|..+|. + ++.+..+......+.++...+++. |..++.+|.+++......
T Consensus       266 g-~l~v~t~~ggl~~~d~-~-g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~  325 (330)
T 3hxj_A          266 D-TIYFGSYDGHLYAINP-D-GTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH  325 (330)
T ss_dssp             S-CEEEECTTCEEEEECT-T-SCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred             C-eEEEecCCCCEEEECC-C-CcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence            6 5667888888999995 6 777777765555677777777776 556889999998876543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.27  E-value=1.7e-09  Score=101.98  Aligned_cols=223  Identities=10%  Similarity=-0.019  Sum_probs=148.3

Q ss_pred             eCCCeEEEEec-CCcEEEEEcCCCCccccc-cccCCCeEEEEE-e-ccCCEEEEee------------------CCCeEE
Q psy8152          95 RYDECILTAVK-SGDVKLWRYKTEPDQWTN-FNVGPQLECMKH-N-KHSNIIATGG------------------KENDLK  152 (444)
Q Consensus        95 ~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~-~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d~~i~  152 (444)
                      ++|++++++.. ++.|.+.|+.+.++...+ ......+..+++ . |++.++++++                  .++.+.
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            47888777655 556999999999877522 233456888898 4 8999998884                  346799


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-----------------------
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-----------------------  209 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----------------------  209 (444)
                      ++|..+.+.+.++.-...                   ...++++|+|+++++.+.+.                       
T Consensus       179 vID~~t~~v~~qI~Vgg~-------------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~  239 (595)
T 1fwx_A          179 AVDADKWEVAWQVLVSGN-------------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA  239 (595)
T ss_dssp             EEETTTTEEEEEEEESSC-------------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred             EEECCCCeEEEEEEeCCC-------------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence            999999888877764333                   34466777777766665432                       


Q ss_pred             ---------------eEEEEEcCCCCC--ccc-eEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCc----
Q psy8152         210 ---------------YVRVYDPKITTQ--RRP-VLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGK----  266 (444)
Q Consensus       210 ---------------~i~i~d~~~~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~----  266 (444)
                                     .|.+.|.+   .  ... +..+... ....++.++|+|++++++ ..+.+|.++|+.+ .+    
T Consensus       240 ~~~~~v~~Gk~~~i~~V~VID~~---~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~-~~~~~~  314 (595)
T 1fwx_A          240 EIEKAIAAGDYQELNGVKVVDGR---KEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR-FDAVFY  314 (595)
T ss_dssp             HHHHHHHHTCSEEETTEEEEECS---GGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGG-HHHHHH
T ss_pred             ceeEeccCCCeeEECcEEEEeCc---ccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcc-cccccc
Confidence                           36777777   3  233 3444432 245789999999987764 4678999999986 42    


Q ss_pred             --------ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC----------CceEEEeecCCceeEEEEcCCC
Q psy8152         267 --------PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS----------KKLLRKDYMQSRLTSILVRSDF  328 (444)
Q Consensus       267 --------~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~----------~~~~~~~~~~~~i~~~~~~~~~  328 (444)
                              .+..+. -......++|+|+|...++.-.+++|.+|++..          .+.+.++......-...++.. 
T Consensus       315 ~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g-  392 (595)
T 1fwx_A          315 ENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMG-  392 (595)
T ss_dssp             SCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTT-
T ss_pred             cccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccc-
Confidence                    233333 234568899999995445566899999999987          456666654433322333221 


Q ss_pred             cccccchhhhhcccccc
Q psy8152         329 SLENETKKEEQEHSEEK  345 (444)
Q Consensus       329 ~~~~~~~~~~~~~s~~~  345 (444)
                        ....+++++|++...
T Consensus       393 --~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          393 --ETLDATNDWLVCLSK  407 (595)
T ss_dssp             --TSTTCCSSEEEEEES
T ss_pred             --eEeCCCCCEEEEcCC
Confidence              123477787776643

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.26  E-value=1.4e-09  Score=107.42  Aligned_cols=293  Identities=12%  Similarity=0.089  Sum_probs=181.7

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccc--------cE-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG--------DI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~--------~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      +..|++++.++.|+.+|..+|+.+..+.......        .+ ..+...+..+++++.++.|..+|..+++.++....
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~  145 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT  145 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence            5678888888999999999999887765321100        00 11223467788889999999999999998874433


Q ss_pred             cC-CCeEEEEEec--cCCEEEEeeC------CCeEEEEEcCCceeeeeeecccce-eeEee-----eCCCcccc------
Q psy8152         126 VG-PQLECMKHNK--HSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHR-VLVYS-----VKPDEFDL------  184 (444)
Q Consensus       126 ~~-~~v~~~~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~------  184 (444)
                      .. .....+...|  .+..++++..      +|.|..+|..+++.+..+...... .....     ........      
T Consensus       146 ~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~  225 (668)
T 1kv9_A          146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL  225 (668)
T ss_dssp             SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred             CCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeee
Confidence            11 0001111112  2345555543      589999999999999887542110 00000     00000000      


Q ss_pred             -cCccceeEEEEecCCCEEEEEeCCce-------------------EEEEEcCCCCCccceEEEeC--CC-------CCe
Q psy8152         185 -RRPVWVNGISFLPNSDKVAVCSKQGY-------------------VRVYDPKITTQRRPVLKVDI--PD-------VAL  235 (444)
Q Consensus       185 -~~~~~i~~~~~~~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~--~~-------~~i  235 (444)
                       ........+++.|...+++.++.++.                   |..+|..   +++.+..++.  |.       .+.
T Consensus       226 ~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~---tG~~~W~~~~~~~~~wd~~~~~~~  302 (668)
T 1kv9_A          226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD---TGKLAWHYQVTPGDSWDFTATQQI  302 (668)
T ss_dssp             CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT---TCCEEEEEESSTTCCSCCCCCSCE
T ss_pred             CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCC---CCceeeEeecCCCccccccCCCCc
Confidence             00001235788888888888887764                   8999988   7777777664  22       222


Q ss_pred             eEEEEccCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc------------Cce----------------------
Q psy8152         236 SCITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA------------GCV----------------------  278 (444)
Q Consensus       236 ~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~------------~~i----------------------  278 (444)
                      ....+..+|+   .|+.++.+|.++++|..+ ++++..++...            .++                      
T Consensus       303 ~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~  381 (668)
T 1kv9_A          303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH  381 (668)
T ss_dssp             EEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred             EEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence            2223334665   688899999999999999 98875433111            000                      


Q ss_pred             --eEEEecCCCCEEEEEE------------------------------------CCCcEEEEEcCCCceEEEeecCCcee
Q psy8152         279 --KDIACPLNENLILSVS------------------------------------LDRHFRVHDFHSKKLLRKDYMQSRLT  320 (444)
Q Consensus       279 --~~~~~s~~~~~l~s~~------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~i~  320 (444)
                        ..++++|+..+++...                                    .+|.|+.||+.+++.+.+.....+..
T Consensus       382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~  461 (668)
T 1kv9_A          382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWN  461 (668)
T ss_dssp             CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred             CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCc
Confidence              1257777766655421                                    23789999999999988876554443


Q ss_pred             EEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      ...+.         ..+.++..++.++.++.|+...++..
T Consensus       462 ~~~~~---------t~gg~vf~g~~dg~l~a~d~~tG~~l  492 (668)
T 1kv9_A          462 GGTLS---------TAGNLVFQGTAAGQMHAYSADKGEAL  492 (668)
T ss_dssp             CCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CceeE---------eCCCEEEEECCcccchhhhhhcChhh
Confidence            22222         22356777889999999999877654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.24  E-value=1.5e-08  Score=98.08  Aligned_cols=294  Identities=13%  Similarity=0.116  Sum_probs=176.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccc------eEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKAS------VLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT   79 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~------v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~   79 (444)
                      +..|++++..+.|+.+|..+++..-+ +. ... .....      -..+++.   +..|++++.++.|..+|..+|+.+.
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~~-~~~-~~~~~~~~~~~~~g~a~~---~~~v~~~t~dg~l~AlD~~TG~~~W  141 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWT-YN-HRL-PDDIRPCCDVVNRGAAIY---GDKVFFGTLDASVVALNKNTGKVVW  141 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEE-EE-CCC-CTTCCCSSCSCCCCCEEE---TTEEEEEETTTEEEEEESSSCCEEE
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEE-Ec-CCC-CcccccccccCCCccEEE---CCEEEEEeCCCEEEEEECCCCCEEe
Confidence            35567776644588899988875211 11 110 00000      0122333   5678888999999999999999987


Q ss_pred             ceeecccc-------ccEEEEE-eCCC-eEEEEe------cCCcEEEEEcCCCCccccccccCC----------------
Q psy8152          80 NTDVSFGE-------GDIVGVS-RYDE-CILTAV------KSGDVKLWRYKTEPDQWTNFNVGP----------------  128 (444)
Q Consensus        80 ~~~~~~~~-------~~v~~~s-~~~~-~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~----------------  128 (444)
                      .+....+.       .++..=. .+++ .+++++      .++.|+.+|..+++.++.......                
T Consensus       142 ~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~  221 (582)
T 1flg_A          142 KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDV  221 (582)
T ss_dssp             EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCT
T ss_pred             eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccc
Confidence            76543321       1221100 1133 565554      378999999999988763221100                


Q ss_pred             -------------------------CeEEEEEeccCCEEEEeeC--------------------C----CeEEEEEcCCc
Q psy8152         129 -------------------------QLECMKHNKHSNIIATGGK--------------------E----NDLKLWDLNTT  159 (444)
Q Consensus       129 -------------------------~v~~~~~~~~~~~l~~~~~--------------------d----~~i~vwd~~~~  159 (444)
                                               .-..+++.|...+++.+..                    |    +.|..+|..++
T Consensus       222 g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG  301 (582)
T 1flg_A          222 KAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSG  301 (582)
T ss_dssp             TCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTC
T ss_pred             ccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCC
Confidence                                     0013466676667776653                    2    58999999999


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccC-ccceeEEEEe-cCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC--
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRR-PVWVNGISFL-PNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD--  232 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--  232 (444)
                      +.+..++...+         +..+... ..++. +... .+|+   .++.++.+|.++++|..   +++.+..+....  
T Consensus       302 ~~~W~~q~~~~---------d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~lw~~~~~~~~  368 (582)
T 1flg_A          302 EVKWFYQHTPN---------DAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRS---NGKLQNAFPFVDNI  368 (582)
T ss_dssp             CEEEEEESSTT---------CCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETT---TCCEEEEEESSSCC
T ss_pred             CEEEEEeCCCC---------CcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECC---CCCEecccccccCc
Confidence            99887764322         0000000 00111 1222 4563   77889999999999988   555555443221  


Q ss_pred             -----------CC--------------------------------eeEEEEccCCCEEEEEc------------------
Q psy8152         233 -----------VA--------------------------------LSCITTTNQSHYVIVGS------------------  251 (444)
Q Consensus       233 -----------~~--------------------------------i~~~~~~~~~~~l~~~~------------------  251 (444)
                                 .+                                -..++++|...++++..                  
T Consensus       369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~  448 (582)
T 1flg_A          369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS  448 (582)
T ss_dssp             CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred             cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence                       00                                01356676655554432                  


Q ss_pred             ---------------CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152         252 ---------------TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ  316 (444)
Q Consensus       252 ---------------~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~  316 (444)
                                     ..|.|+.||+.+ ++.+.++..+ .++..-.....+.+++.++.|+.|+.||..+|+.+.++...
T Consensus       449 ~~~g~~~~~~p~~~~~~G~l~A~D~~t-G~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~  526 (582)
T 1flg_A          449 AYLGMGFRIKRMYDDHVGSLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG  526 (582)
T ss_dssp             CCCCEEEEEEESCSSCSEEEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ceeccceeecCCCCCCcceEEEEECCC-CCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence                           357899999999 9988877632 22222122224667888999999999999999999988765


Q ss_pred             Ccee
Q psy8152         317 SRLT  320 (444)
Q Consensus       317 ~~i~  320 (444)
                      ..+.
T Consensus       527 ~g~~  530 (582)
T 1flg_A          527 SGIV  530 (582)
T ss_dssp             SCCC
T ss_pred             CCcc
Confidence            5443

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.23  E-value=5.8e-08  Score=84.55  Aligned_cols=245  Identities=9%  Similarity=-0.063  Sum_probs=146.2

Q ss_pred             cEEEEEEcCCeEEEEeCCCCcccc-----ceeeccccccEEEEEeCCCeEEE-EecCCcEEEEEcCCCCccccccccCCC
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNT-----NTDVSFGEGDIVGVSRYDECILT-AVKSGDVKLWRYKTEPDQWTNFNVGPQ  129 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~-----~~~~~~~~~~v~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~  129 (444)
                      .+|+.+.. +.|+.+++.......     .+..+.....-.++.++++.|+. -...+.|.++++...............
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~   80 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence            45555554 478888887544321     11111111223445665555554 445789999998766543222222356


Q ss_pred             eEEEEEeccCCE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-
Q psy8152         130 LECMKHNKHSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-  207 (444)
Q Consensus       130 v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-  207 (444)
                      ...+++.+++.. +++....+.|.++++..............                  ....++++|++..|..+.. 
T Consensus        81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~------------------~P~~i~vd~~~g~lyv~~~~  142 (267)
T 1npe_A           81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV------------------NPRGIVTDPVRGNLYWTDWN  142 (267)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS------------------SEEEEEEETTTTEEEEEECC
T ss_pred             ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCC------------------CccEEEEeeCCCEEEEEECC
Confidence            789999996544 44555578899999864322111111111                  4688999997655554443 


Q ss_pred             --CceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEE-EEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152         208 --QGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC  283 (444)
Q Consensus       208 --d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~  283 (444)
                        .+.|..+++. . .  ....+ .........++++|++..| ++-...+.|.++++.. ......+.+ ......++.
T Consensus       143 ~~~~~I~~~~~d-g-~--~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~  216 (267)
T 1npe_A          143 RDNPKIETSHMD-G-T--NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTS  216 (267)
T ss_dssp             SSSCEEEEEETT-S-C--CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEE
T ss_pred             CCCcEEEEEecC-C-C--CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEE
Confidence              4688888887 1 1  11222 2233457889999986655 4555668899999875 443333332 223456665


Q ss_pred             cCCCCEEEEEE-CCCcEEEEEcCCCceEEEeecCC--ceeEEEEcCC
Q psy8152         284 PLNENLILSVS-LDRHFRVHDFHSKKLLRKDYMQS--RLTSILVRSD  327 (444)
Q Consensus       284 s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~--~i~~~~~~~~  327 (444)
                      .  +..|+.+. ..+.|.+++..+++.+..+....  ....+++.++
T Consensus       217 d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~  261 (267)
T 1npe_A          217 Y--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS  261 (267)
T ss_dssp             E--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred             e--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence            4  44454444 56899999999999888876432  4677777765

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.21  E-value=1.6e-08  Score=92.07  Aligned_cols=237  Identities=12%  Similarity=0.067  Sum_probs=148.0

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeec---cc-C-cccceEEEeeeccCCcEEEEEEcC------CeEEEEeCC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK---YI-T-NKASVLALNWGNVEESELLIAYSG------QKIKIYDTD   73 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~---~~-~-h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~   73 (444)
                      ....++.|..++.|+++|+.+.....+....+.   .. . -......+..+ |++ .++++..+      +.|.++|..
T Consensus        95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~-pdG-i~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCG-PDA-IYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEEC-SSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred             CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeEC-CCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence            445666777889999999975532222223231   00 0 11244566777 677 76666555      789999999


Q ss_pred             CCccccceeeccccc-cE--EEEEeCCCeEEEEe-------------------cCCcEEEEEcCCCCcccccccc--CCC
Q psy8152          74 FKNFNTNTDVSFGEG-DI--VGVSRYDECILTAV-------------------KSGDVKLWRYKTEPDQWTNFNV--GPQ  129 (444)
Q Consensus        74 ~~~~~~~~~~~~~~~-~v--~~~s~~~~~l~~~~-------------------~dg~i~iw~~~~~~~~~~~~~~--~~~  129 (444)
                      +.+.+..+....... .-  ..++|+++.+++..                   ...+|.+||+.+++.+..+.--  ...
T Consensus       173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~  252 (462)
T 2ece_A          173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM  252 (462)
T ss_dssp             TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred             CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence            999988876432221 12  34589999888874                   3689999999987665432221  123


Q ss_pred             eEEEEE--eccCCEEEEee------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc----------Ccccee
Q psy8152         130 LECMKH--NKHSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR----------RPVWVN  191 (444)
Q Consensus       130 v~~~~~--~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~  191 (444)
                      ...+.|  +|+++++++++      .+++|.+|....+.... .+       .+.+.+......          ....+.
T Consensus       253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~-------vIdi~~~~v~~~lp~~~~~f~~~~~~pa  324 (462)
T 2ece_A          253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EK-------VIEIPAEPLEGNLPEILKPFKAVPPLVT  324 (462)
T ss_dssp             EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EE-------EEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred             cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EE-------EEeCCCccccccccccccccccCCCcee
Confidence            455656  99999888877      46688887765533110 00       011110000000          012478


Q ss_pred             EEEEecCCCEEEEEeC-CceEEEEEcCCCCCccceEEEeCCC--------------CCeeEEEEccCCCEEEEEc
Q psy8152         192 GISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRPVLKVDIPD--------------VALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       192 ~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~  251 (444)
                      .|.++|++++|.++.. .+.|.+||+......+.+..+....              ..-..++++|+|++|+++.
T Consensus       325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            8999999988876654 7899999986233445555554321              1257899999999999886

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.20  E-value=6.6e-08  Score=84.19  Aligned_cols=251  Identities=11%  Similarity=0.062  Sum_probs=148.2

Q ss_pred             cEEEecCCCcEEEEEcCCCccceee-eeeecccCcccceEEEeeeccCCcEEEE-EEcCCeEEEEeCCCCccccceeecc
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKN-IQNVKYITNKASVLALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      +|+.+. .+.|+.+++......... ...+.  .....+.+++|+ +.+..|+. -...+.|.++++.+......+....
T Consensus         3 ~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~--~~~~~~~gi~~d-~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~   78 (267)
T 1npe_A            3 HLLFAQ-TGKIERLPLERNTMKKTEAKAFLH--IPAKVIIGLAFD-CVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL   78 (267)
T ss_dssp             EEEEEE-EEEEEEEEESSSCBCGGGCEEEEE--EEEEEEEEEEEE-TTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred             EEEEEc-CCeEEEEEecCcccccccceeeec--CCCCcEEEEEEe-cCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence            445544 357888888765421000 01111  113457899999 55555554 4456899999987654432221111


Q ss_pred             ccccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccc-cCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCce
Q psy8152          86 GEGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFN-VGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTK  160 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~  160 (444)
                      ....-.++.+++..|+ +-...+.|.++++...... .+.. .......++++|++..|+.+..   .+.|..+++....
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~  157 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN  157 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred             CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence            1223345567655554 4455678999998754332 2222 2246789999996555555443   3688888876422


Q ss_pred             eeeeee-cccceeeEeeeCCCcccccCccceeEEEEecCCCEE-EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         161 NIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV-AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                       ...+. ...                  .....++++|++..| ++-...+.|.++++.   .......+... .....+
T Consensus       158 -~~~~~~~~~------------------~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~---g~~~~~~~~~~-~~P~gi  214 (267)
T 1npe_A          158 -RRILAQDNL------------------GLPNGLTFDAFSSQLCWVDAGTHRAECLNPA---QPGRRKVLEGL-QYPFAV  214 (267)
T ss_dssp             -CEEEECTTC------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEEEEECC-CSEEEE
T ss_pred             -cEEEEECCC------------------CCCcEEEEcCCCCEEEEEECCCCEEEEEecC---CCceEEEecCC-CCceEE
Confidence             11111 111                  147889999987655 455567899999988   33222223322 234567


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-CceeEEEecCCCC
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-GCVKDIACPLNEN  288 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-~~i~~~~~s~~~~  288 (444)
                      +.. .+.++++....+.|.+++..+ ++.+.++.... .....+++.|++.
T Consensus       215 ~~d-~~~lyva~~~~~~v~~~d~~~-g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          215 TSY-GKNLYYTDWKTNSVIAMDLAI-SKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             EEE-TTEEEEEETTTTEEEEEETTT-TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             EEe-CCEEEEEECCCCeEEEEeCCC-CCceEEEccccccccceeeecCccC
Confidence            664 444555555678999999998 88888886432 2467888888764

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.18  E-value=5.4e-09  Score=101.14  Aligned_cols=290  Identities=9%  Similarity=-0.043  Sum_probs=176.5

Q ss_pred             CcEEEEEEc-CCeEEEEeC-CCCccccceeeccccc--------c-EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc
Q psy8152          55 ESELLIAYS-GQKIKIYDT-DFKNFNTNTDVSFGEG--------D-IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN  123 (444)
Q Consensus        55 ~~~l~~~~~-d~~i~vw~~-~~~~~~~~~~~~~~~~--------~-v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  123 (444)
                      +..|++++. ++.|+.+|. .+|+.+..+.......        . ...+...+..+++++.++.|..+|..+++.++..
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~  141 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV  141 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence            456777777 889999999 8999887765432110        0 0112335678888889999999999999988743


Q ss_pred             cccC----CCeEE-EEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeCCC------------
Q psy8152         124 FNVG----PQLEC-MKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD------------  180 (444)
Q Consensus       124 ~~~~----~~v~~-~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~------------  180 (444)
                      ....    ..+.+ ...  .+..+++++.      ++.|..+|..+++.+.++........ ....|.            
T Consensus       142 ~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~-~~~~p~~~~~~~~~G~~~  218 (571)
T 2ad6_A          142 EVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDS-VRLAKDFNSANPHYGQFG  218 (571)
T ss_dssp             ECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHH-HTBCTTTTTTCGGGCCSS
T ss_pred             cCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccc-cccCcccccccccccccc
Confidence            2211    12221 111  2345555554      79999999999999887764332100 000000            


Q ss_pred             ---------cccccCccceeEEEEecCCCEEEEEeCC----------------ceEEEEEcCCCCCccceEEEeCCC--C
Q psy8152         181 ---------EFDLRRPVWVNGISFLPNSDKVAVCSKQ----------------GYVRVYDPKITTQRRPVLKVDIPD--V  233 (444)
Q Consensus       181 ---------~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~~~~--~  233 (444)
                               .....-......+++.+....++.++.+                +.|..+|..   +++.+..++...  .
T Consensus       219 ~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~---tG~~~W~~~~~~~d~  295 (571)
T 2ad6_A          219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLD---TGMAKWGYQKTPHDE  295 (571)
T ss_dssp             HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETT---TCCEEEEEESSTTCS
T ss_pred             cccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecC---CCcEEEEecCCCCcc
Confidence                     0000000001235667766666666532                368999998   677777665321  1


Q ss_pred             ----CeeE---EEEccCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc-------------Cce------------
Q psy8152         234 ----ALSC---ITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------GCV------------  278 (444)
Q Consensus       234 ----~i~~---~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------~~i------------  278 (444)
                          .+..   +...++|+   .++.++.+|.++++|..+ ++++..+.-..             .++            
T Consensus       296 ~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~  374 (571)
T 2ad6_A          296 WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHK  374 (571)
T ss_dssp             SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCC
T ss_pred             cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeecccCCccccccccccCCceecccccCCCCCCC
Confidence                1111   22224674   677899999999999999 98887664211             111            


Q ss_pred             --------------eEEEecCCCCEEEEEE-------------------------------------CCCcEEEEEcCCC
Q psy8152         279 --------------KDIACPLNENLILSVS-------------------------------------LDRHFRVHDFHSK  307 (444)
Q Consensus       279 --------------~~~~~s~~~~~l~s~~-------------------------------------~dg~i~vw~~~~~  307 (444)
                                    ..++++|+..+|+..+                                     .+|.|..||+.++
T Consensus       375 ~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG  454 (571)
T 2ad6_A          375 GTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG  454 (571)
T ss_dssp             EEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC
T ss_pred             ceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC
Confidence                          2357888777776653                                     3478999999999


Q ss_pred             ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         308 KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      +.+.+..+...+.+..+.         ..+..+..++.|+.++.||..+++..
T Consensus       455 ~~~W~~~~~~~~~~~~~~---------t~gg~v~~g~~dg~l~a~D~~tG~~l  498 (571)
T 2ad6_A          455 KAKWTKWEKFAAWGGTLY---------TKGGLVWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             CEEEEEEESSCCCSBCEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CEEEEecCCCCccceeEE---------ECCCEEEEEcCCCeEEEEECCCCCEE
Confidence            988877655443222111         11245566788999999999887765

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.15  E-value=2.8e-09  Score=100.54  Aligned_cols=234  Identities=10%  Similarity=-0.004  Sum_probs=156.7

Q ss_pred             CcccEEEec-CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-cCCcEEEEEE------------------cC
Q psy8152           5 DDYNIYIGS-STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-VEESELLIAY------------------SG   64 (444)
Q Consensus         5 ~~~~l~~g~-~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~~~~------------------~d   64 (444)
                      ++.++++.. .++.|.+.++.+.++.    +.+ .+.....+..+++.. |++.++++++                  .+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~----~ii-~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~  174 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCD----AIL-EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV  174 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEE----EEE-ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEe----eEE-eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence            445566654 4667999999988741    211 122344577888854 6899998885                  24


Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC-------------------------------------
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG-------------------------------------  107 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg-------------------------------------  107 (444)
                      +.+.++|..+.+....+...+ ...-..++|+|+++++++.+.                                     
T Consensus       175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i  253 (595)
T 1fwx_A          175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL  253 (595)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred             ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence            689999999988888877644 555677889999988887553                                     


Q ss_pred             -cEEEEEcCC--CCccccccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCce------------eeeeeecccce
Q psy8152         108 -DVKLWRYKT--EPDQWTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTK------------NIFSAKNVSHR  171 (444)
Q Consensus       108 -~i~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~------------~~~~~~~~~~~  171 (444)
                       .|.|.|..+  ++.......-.....++.++|+|+++++++ .+.+|.++|+.+.+            .+......   
T Consensus       254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---  330 (595)
T 1fwx_A          254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---  330 (595)
T ss_dssp             TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---
T ss_pred             CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---
Confidence             366666665  333111333344667899999999777665 57899999999653            12222111   


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-------CCccceEEEeCCCCCe-----eEEE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-------TQRRPVLKVDIPDVAL-----SCIT  239 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~~~i-----~~~~  239 (444)
                                      .....++|+|+|...++...+++|.+|++...       .....+.++..|-.+-     ..+.
T Consensus       331 ----------------~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t  394 (595)
T 1fwx_A          331 ----------------LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGET  394 (595)
T ss_dssp             ----------------SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTS
T ss_pred             ----------------CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceE
Confidence                            24889999999955556778999999999810       1145666676664432     2234


Q ss_pred             EccCCCEEEEEcC---CCc----------EEEEEcCC
Q psy8152         240 TTNQSHYVIVGST---TGD----------MMAVDLRG  263 (444)
Q Consensus       240 ~~~~~~~l~~~~~---dg~----------i~iwd~~~  263 (444)
                      ++|+|++|+++..   |+.          -.++|+..
T Consensus       395 ~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~  431 (595)
T 1fwx_A          395 LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG  431 (595)
T ss_dssp             TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred             eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence            5899999998543   432          17888854

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.14  E-value=2.6e-08  Score=85.24  Aligned_cols=208  Identities=11%  Similarity=0.033  Sum_probs=141.5

Q ss_pred             eeecccCcccc--eEEEeeeccCCcEEEEEE-c--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe-cCC
Q psy8152          34 QNVKYITNKAS--VLALNWGNVEESELLIAY-S--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV-KSG  107 (444)
Q Consensus        34 ~~~~~~~h~~~--v~~~~~~~~~~~~l~~~~-~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~dg  107 (444)
                      +.+..+.|...  ...+.|+ +++ .|+.++ .  ++.|+++|+.+++.+..+.... ......+.++++.|+.+. .++
T Consensus        10 ~vv~~~p~~~~~f~~Gl~~~-~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~~~~   86 (266)
T 2iwa_A           10 EVLNEFPHDPYAFTQGLVYA-END-TLFESTGLYGRSSVRQVALQTGKVENIHKMDD-SYFGEGLTLLNEKLYQVVWLKN   86 (266)
T ss_dssp             EEEEEEECCTTCCEEEEEEC-STT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEETTCS
T ss_pred             eEEEEEECCCCCCcccEEEe-CCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCC-CcceEEEEEeCCEEEEEEecCC
Confidence            34444455543  5799999 665 555443 3  5899999999999998876533 233345666666655544 578


Q ss_pred             cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      .+.++|..+.+.+..+. .. .-....++++++.|+++..++.|.++|..+.+.+..+......             ..-
T Consensus        87 ~v~viD~~t~~v~~~i~-~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~-------------~p~  151 (266)
T 2iwa_A           87 IGFIYDRRTLSNIKNFT-HQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG-------------HRV  151 (266)
T ss_dssp             EEEEEETTTTEEEEEEE-CC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT-------------EEC
T ss_pred             EEEEEECCCCcEEEEEE-CC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC-------------ccc
Confidence            99999999988776432 22 1113445667777777777899999999998877666532210             000


Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-------------CCCeeEEEEccCCC-EEEEEcCC
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-------------DVALSCITTTNQSH-YVIVGSTT  253 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~-~l~~~~~d  253 (444)
                      ..++.+.|. ++..++.....+.|.+.|..   +++.+..+...             ......|+|+|+++ +++++...
T Consensus       152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~---tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~  227 (266)
T 2iwa_A          152 IRLNELEYI-NGEVWANIWQTDCIARISAK---DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW  227 (266)
T ss_dssp             CCEEEEEEE-TTEEEEEETTSSEEEEEETT---TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred             ccceeEEEE-CCEEEEecCCCCeEEEEECC---CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence            126678888 66666666568899999999   67777766532             12458999999975 55567788


Q ss_pred             CcEEEEEcCC
Q psy8152         254 GDMMAVDLRG  263 (444)
Q Consensus       254 g~i~iwd~~~  263 (444)
                      +.|++.++..
T Consensus       228 ~~v~~i~l~~  237 (266)
T 2iwa_A          228 PKLFEIKLHL  237 (266)
T ss_dssp             SEEEEEEEEE
T ss_pred             CeEEEEEEec
Confidence            8999998876

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.11  E-value=2.5e-08  Score=96.39  Aligned_cols=289  Identities=10%  Similarity=0.020  Sum_probs=174.3

Q ss_pred             CcEEEEEEc-CCeEEEEeC-CCCccccceeecccc-----------ccEEEEEeCCCe----EEEEecCCcEEEEEcCCC
Q psy8152          55 ESELLIAYS-GQKIKIYDT-DFKNFNTNTDVSFGE-----------GDIVGVSRYDEC----ILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        55 ~~~l~~~~~-d~~i~vw~~-~~~~~~~~~~~~~~~-----------~~v~~~s~~~~~----l~~~~~dg~i~iw~~~~~  117 (444)
                      +..|++++. ++.|+-+|. .+|+.+..+......           ..-.+++|.+..    |++++.++.|..+|..++
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            456777777 889999999 899988776543211           011233335555    888889999999999999


Q ss_pred             CccccccccC----CCeEE-EEEeccCCEEEEee------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCC------
Q psy8152         118 PDQWTNFNVG----PQLEC-MKHNKHSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD------  180 (444)
Q Consensus       118 ~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~------  180 (444)
                      +.++......    ..+.+ ..+. + ..+++++      .++.|+.+|..+++.+.++........ ..+.|.      
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~-~~~~p~~~~~~~  218 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKD-LLLASDFNIKNP  218 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHH-HTBCTTTTTTCG
T ss_pred             CEEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccc-cccccccccccc
Confidence            9887432211    12221 1111 3 4556555      379999999999999887764432100 000000      


Q ss_pred             ---------------cccccC-ccceeEEEEecCCCEEEEEeCC----------------ceEEEEEcCCCCCccceEEE
Q psy8152         181 ---------------EFDLRR-PVWVNGISFLPNSDKVAVCSKQ----------------GYVRVYDPKITTQRRPVLKV  228 (444)
Q Consensus       181 ---------------~~~~~~-~~~i~~~~~~~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~  228 (444)
                                     .....- ..| ..+++.+...+++.++.+                +.|..+|..   +++.+..+
T Consensus       219 ~~g~~~~g~~tw~g~~~~~gg~~~W-~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~---TG~~~W~~  294 (599)
T 1w6s_A          219 HYGQKGLGTGTWEGDAWKIGGGTNW-GWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDAD---TGEAKFGY  294 (599)
T ss_dssp             GGCCTTHHHHTSSTTGGGGCCCCCC-SCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETT---TCCEEEEE
T ss_pred             cccccccccccCCCcceecCCCccc-cceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCC---CCceeeEe
Confidence                           000000 001 135666777777777665                378999998   67777766


Q ss_pred             eCCCCC------e---eEEEEc-cCC---CEEEEEcCCCcEEEEEcCCCCcceeEecccc-------------Cce----
Q psy8152         229 DIPDVA------L---SCITTT-NQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------GCV----  278 (444)
Q Consensus       229 ~~~~~~------i---~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------~~i----  278 (444)
                      +.....      .   .-+... .+|   ..++.++.+|.++++|..+ ++++....-..             .++    
T Consensus       295 q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~  373 (599)
T 1w6s_A          295 QKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSANKLDDTVNVFKSVDLKTGQPVRDPE  373 (599)
T ss_dssp             ESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSEEEECTTTCCEEECGG
T ss_pred             ecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC-CCEeecccccCCcccccccccCCCceeeccc
Confidence            543211      1   112222 467   5677899999999999999 98887654110             111    


Q ss_pred             ----------------------eEEEecCCCCEEEEEE---------------------------------------CCC
Q psy8152         279 ----------------------KDIACPLNENLILSVS---------------------------------------LDR  297 (444)
Q Consensus       279 ----------------------~~~~~s~~~~~l~s~~---------------------------------------~dg  297 (444)
                                            ..++++|+..++++..                                       ..|
T Consensus       374 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G  453 (599)
T 1w6s_A          374 YGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG  453 (599)
T ss_dssp             GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE
T ss_pred             cCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC
Confidence                                  1356677666554431                                       347


Q ss_pred             cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         298 HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       298 ~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      .|..||+.+++.+.+..+..+...-.+         ...+.++..++.|+.++.+|..+++.+
T Consensus       454 ~l~A~D~~tG~~~W~~~~~~~~~~g~~---------~tagg~vf~gt~dg~l~A~D~~tG~~l  507 (599)
T 1w6s_A          454 QIKAYNAITGDYKWEKMERFAVWGGTM---------ATAGDLVFYGTLDGYLKARDSDTGDLL  507 (599)
T ss_dssp             EEEEECTTTCCEEEEEEESSCCCSBCE---------EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             eEEEEECCCCCEEeEecCCCCccCcce---------EecCCEEEEECCCCeEEEEECCCCCEE
Confidence            888999999988877654432211100         012345666788999999998877654

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.09  E-value=7.5e-08  Score=81.35  Aligned_cols=199  Identities=12%  Similarity=0.077  Sum_probs=133.5

Q ss_pred             eeeeecccCcccce--EEEeeeccCCcEEEEEEcCC--eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe-cC
Q psy8152          32 NIQNVKYITNKASV--LALNWGNVEESELLIAYSGQ--KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV-KS  106 (444)
Q Consensus        32 ~~~~~~~~~h~~~v--~~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~d  106 (444)
                      .+..+....|...-  ..+.|+  ++.++.+.+.+|  .|+++|+.+++.+..+.+.. ......+.+.++.|.... .+
T Consensus        30 ~~~vv~~~phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~  106 (262)
T 3nol_A           30 DYQIVHSYPHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKN  106 (262)
T ss_dssp             EEEEEEEEECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSS
T ss_pred             ceEEEEEecCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeC
Confidence            34445555666544  788898  356666666665  89999999999998886532 333345666676665554 58


Q ss_pred             CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccC
Q psy8152         107 GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       107 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      +.+.+||..+.+.+..+.. ..  ....+.+++..|+.+...+.|.++|..+.+.+.++......             ..
T Consensus       107 ~~v~v~D~~t~~~~~ti~~-~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g-------------~~  170 (262)
T 3nol_A          107 GLGFVWNIRNLRQVRSFNY-DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG-------------EE  170 (262)
T ss_dssp             SEEEEEETTTCCEEEEEEC-SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT-------------EE
T ss_pred             CEEEEEECccCcEEEEEEC-CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC-------------cc
Confidence            8999999999988864332 22  22333456777777766789999999998877766542210             00


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------------CCCeeEEEEccCCCEEEEEcCC
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------------DVALSCITTTNQSHYVIVGSTT  253 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~~~~~d  253 (444)
                      -..++.+.|. +|+.++..-....|.+.|..   +++.+..+...            ....+.|+|+|+++.|++.+..
T Consensus       171 ~~~lNELe~~-~G~lyan~w~~~~I~vIDp~---tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~  245 (262)
T 3nol_A          171 LPELNELEWV-DGEIFANVWQTNKIVRIDPE---TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL  245 (262)
T ss_dssp             CCCEEEEEEE-TTEEEEEETTSSEEEEECTT---TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred             ccccceeEEE-CCEEEEEEccCCeEEEEECC---CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence            0125567776 67666666678899999998   67666665532            2345899999987776665543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.06  E-value=6.9e-08  Score=93.47  Aligned_cols=292  Identities=12%  Similarity=0.053  Sum_probs=174.1

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeecccccc-------EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccC
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGD-------IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVG  127 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-------v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  127 (444)
                      +..|++++..+.|+.+|..+|+.+..+........       ...+...+..+++++.++.|..+|..+++.++......
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~  147 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD  147 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence            45666666645599999999998877754321110       01122346778888899999999999999887433221


Q ss_pred             ----CCeE-EEEEec---cCC-EEEEee------CCCeEEEEEcCCceeeeeeecccceee-----EeeeC-CCcc---c
Q psy8152         128 ----PQLE-CMKHNK---HSN-IIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVL-----VYSVK-PDEF---D  183 (444)
Q Consensus       128 ----~~v~-~~~~~~---~~~-~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~---~  183 (444)
                          ..+. ...+..   +++ .+++++      .++.|+.+|..+++.+.........+.     ..... ..+.   .
T Consensus       148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~  227 (582)
T 1flg_A          148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWP  227 (582)
T ss_dssp             GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSC
T ss_pred             CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCC
Confidence                0111 111111   122 566665      378999999999998886543211000     00000 0000   0


Q ss_pred             ---------------ccCccceeEEEEecCCCEEEEEeC--------------------C----ceEEEEEcCCCCCccc
Q psy8152         184 ---------------LRRPVWVNGISFLPNSDKVAVCSK--------------------Q----GYVRVYDPKITTQRRP  224 (444)
Q Consensus       184 ---------------~~~~~~i~~~~~~~~~~~l~~~~~--------------------d----~~i~i~d~~~~~~~~~  224 (444)
                                     .....+ ..+++.|...+++.+..                    |    +.|..+|..   +++.
T Consensus       228 ~~~~~~~g~~~~~~~gGg~~w-~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~---TG~~  303 (582)
T 1flg_A          228 DDRNSPTGKVESWSHGGGAPW-QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPS---SGEV  303 (582)
T ss_dssp             BCTTSTTSBCGGGGGCBCCCC-SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTT---TCCE
T ss_pred             CccccccccccccccCCcccc-CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCC---CCCE
Confidence                           000111 24677777777776653                    2    589999998   6777


Q ss_pred             eEEEeC--CCC----CeeE-EEEc---cCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc-------------Cce
Q psy8152         225 VLKVDI--PDV----ALSC-ITTT---NQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------GCV  278 (444)
Q Consensus       225 ~~~~~~--~~~----~i~~-~~~~---~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------~~i  278 (444)
                      +..++.  |..    .+.. +.+.   .+|+   .|+.++.+|.++++|..+ ++++..+....             .++
T Consensus       304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~~~~~~~~~~~~~~~~g~p~  382 (582)
T 1flg_A          304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN-GKLQNAFPFVDNITWASHIDLKTGRPV  382 (582)
T ss_dssp             EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT-CCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred             EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC-CCEecccccccCccccccccccCCCEe
Confidence            777653  211    1111 2222   4663   788899999999999999 98887665321             000


Q ss_pred             --------------------------------eEEEecCCCCEEEEEE--------------------------------
Q psy8152         279 --------------------------------KDIACPLNENLILSVS--------------------------------  294 (444)
Q Consensus       279 --------------------------------~~~~~s~~~~~l~s~~--------------------------------  294 (444)
                                                      ..++++|+..++++..                                
T Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~  462 (582)
T 1flg_A          383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD  462 (582)
T ss_dssp             ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred             EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence                                            1346666655555432                                


Q ss_pred             -CCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         295 -LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       295 -~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                       ..|.|+.||+.+++.+.+.....++..-.+.         ..+.++..++.|+.++.||..+++.+
T Consensus       463 ~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~---------tagglvf~g~~dg~l~A~D~~tG~~l  520 (582)
T 1flg_A          463 DHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLA---------TAGNLVFTGTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             SCSEEEEEECTTTCCEEEEEEESSCCCSCCEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCcceEEEEECCCCCEEEEecCCCCCcccceE---------eCCCEEEEECCCCcEEEEECCCCCEE
Confidence             2578999999999988776654332211110         12356667889999999999887754

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.05  E-value=9.5e-08  Score=85.70  Aligned_cols=237  Identities=9%  Similarity=-0.011  Sum_probs=144.4

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc------------------ccccEEEE--EeCCCeEEE
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF------------------GEGDIVGV--SRYDECILT  102 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------------------~~~~v~~~--s~~~~~l~~  102 (444)
                      ....+++|. +++++++++..++.|..|+..++.... +....                  ......++  .+++..|++
T Consensus        19 ~~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v   96 (322)
T 2fp8_A           19 YAPNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI   96 (322)
T ss_dssp             SCCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred             CCceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence            345778899 678878888888999999987654332 21100                  01123444  442445555


Q ss_pred             EecCCcEEEEEcCCCCccccccc-----cCCCeEEEEEec-cCCEEEEeeC-----------------CCeEEEEEcCCc
Q psy8152         103 AVKSGDVKLWRYKTEPDQWTNFN-----VGPQLECMKHNK-HSNIIATGGK-----------------ENDLKLWDLNTT  159 (444)
Q Consensus       103 ~~~dg~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~vwd~~~~  159 (444)
                      +...+.|..++..++.... +..     .......+++.+ ++++.++...                 .+.|..|+..++
T Consensus        97 ~d~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~  175 (322)
T 2fp8_A           97 VDCYYHLSVVGSEGGHATQ-LATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK  175 (322)
T ss_dssp             EETTTEEEEECTTCEECEE-EESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred             EECCCCEEEEeCCCCEEEE-ecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence            6555568888876554321 111     123468899999 8877766432                 367888887766


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      +.........                   ....|+++|++++|+++ +..+.|.+|++. .........+..... ...+
T Consensus       176 ~~~~~~~~~~-------------------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~-~~~~~~~~~~~~~~g-P~gi  234 (322)
T 2fp8_A          176 ETTLLLKELH-------------------VPGGAEVSADSSFVLVAEFLSHQIVKYWLE-GPKKGTAEVLVKIPN-PGNI  234 (322)
T ss_dssp             EEEEEEEEES-------------------CCCEEEECTTSSEEEEEEGGGTEEEEEESS-STTTTCEEEEEECSS-EEEE
T ss_pred             EEEEeccCCc-------------------cCcceEECCCCCEEEEEeCCCCeEEEEECC-CCcCCccceEEeCCC-CCCe
Confidence            5432222111                   35679999999866554 567899999987 211111111111223 6789


Q ss_pred             EEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccc----cCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         239 TTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGF----AGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       239 ~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h----~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      ++.++|++.++...          .+.|..++..  ++.+..+...    ...++.+++ .+++++++....+.|.++++
T Consensus       235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~  311 (322)
T 2fp8_A          235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY  311 (322)
T ss_dssp             EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred             EECCCCCEEEEecCcccccccCCCccEEEEECCC--CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence            99999987766544          4568888763  6777666533    234666766 35555555556788888887


Q ss_pred             CC
Q psy8152         305 HS  306 (444)
Q Consensus       305 ~~  306 (444)
                      ..
T Consensus       312 ~~  313 (322)
T 2fp8_A          312 DK  313 (322)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.02  E-value=1.7e-06  Score=87.63  Aligned_cols=276  Identities=13%  Similarity=0.138  Sum_probs=167.2

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec-
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS-   84 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-   84 (444)
                      +..|.+|+..+-|..|+..+++.     ..+....+...|.++... +++ .|..|+..+-|.+|+..+++........ 
T Consensus       183 ~g~lwigt~~~Gl~~~~~~~~~~-----~~~~~~~~~~~i~~i~~d-~~g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~  255 (795)
T 4a2l_A          183 GDQIYIGTSTDGLYTYSITQKTF-----EKVIPILGTKQIQAILQQ-SPT-RIWVATEGAGLFLINPKTKEIKNYLHSPS  255 (795)
T ss_dssp             TTEEEEEESSSCEEEEETTTCCE-----EECC----CCCEEEEEEE-ETT-EEEEEEBSSCEEEEETTTTEEEEECCCTT
T ss_pred             CCCEEEEECCCCEEEEeCCCCeE-----EEecCCCCCCeeEEEEEc-CCC-CEEEEECCCCeEEEeCCCCeEEEeecCCC
Confidence            35567777765688888776652     111111235678888887 444 4556665556889998766543321100 


Q ss_pred             ----cccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCcccccc-------ccCCCeEEEEEeccCCEEEEeeCCCeEE
Q psy8152          85 ----FGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNF-------NVGPQLECMKHNKHSNIIATGGKENDLK  152 (444)
Q Consensus        85 ----~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~  152 (444)
                          -....|.++..+ ...|..|+.. -|.+|+..+++......       -....|.++...++|. |..|+.++-|.
T Consensus       256 ~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~  333 (795)
T 4a2l_A          256 NPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLN  333 (795)
T ss_dssp             CTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEE
T ss_pred             CccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeE
Confidence                113567777654 3345556665 68889987665432111       1235699999988775 55667667788


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe---
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD---  229 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---  229 (444)
                      +|+..++.... +.....        +.+   .....|.++...+++. |..|+.++-|..|+..   ... ...+.   
T Consensus       334 ~~~~~~~~~~~-~~~~~~--------~~~---l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~---~~~-~~~~~~~~  396 (795)
T 4a2l_A          334 YYHPIRNRFKN-IRNIPY--------KNS---LSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPI---TQR-FTSYTLQE  396 (795)
T ss_dssp             EECGGGGSSEE-ECCCTT--------SSS---CSCSSEEEEEECTTSC-EEEEESSSCEEEECTT---TCC-EEEECCC-
T ss_pred             EeCCCcccceE-EcCCCC--------CCC---CCCCeeEEEEECCCCC-EEEEECCCCeEEEcCC---CCc-EEEEecCC
Confidence            88876543221 111000        000   0122589999888776 4457777778999877   222 22221   


Q ss_pred             ------CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec----cccCceeEEEecCCCCEEEEEECCCcE
Q psy8152         230 ------IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK----GFAGCVKDIACPLNENLILSVSLDRHF  299 (444)
Q Consensus       230 ------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~h~~~i~~~~~s~~~~~l~s~~~dg~i  299 (444)
                            .....|.+++..+++++|.+|+.++-|.+|+..+ ++......    .+...|.++...+++.+.+. +. +.|
T Consensus       397 ~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl  473 (795)
T 4a2l_A          397 DESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-GQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SAL  473 (795)
T ss_dssp             -----CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT-CCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCE
T ss_pred             CCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-CcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-Cce
Confidence                  1235688999888888566777777799999887 54332211    13457899998888875554 44 458


Q ss_pred             EEEEcCCCceE
Q psy8152         300 RVHDFHSKKLL  310 (444)
Q Consensus       300 ~vw~~~~~~~~  310 (444)
                      .+|+..+++..
T Consensus       474 ~~~~~~~~~~~  484 (795)
T 4a2l_A          474 VRFNPEQRSFT  484 (795)
T ss_dssp             EEEETTTTEEE
T ss_pred             eEEeCCCCeEE
Confidence            89998876553

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.02  E-value=7e-08  Score=81.55  Aligned_cols=175  Identities=13%  Similarity=0.099  Sum_probs=123.1

Q ss_pred             ccCCC--eEEEEEeccCCEEEEeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         125 NVGPQ--LECMKHNKHSNIIATGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       125 ~~~~~--v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      .|...  ...+.|+ ++.++.+.+.+|  .|+++|+.+++.+..+.....                   .......+.+.
T Consensus        38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-------------------~FgeGit~~g~   97 (262)
T 3nol_A           38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-------------------YFGEGISDWKD   97 (262)
T ss_dssp             ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-------------------CCEEEEEEETT
T ss_pred             cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-------------------cceeEEEEeCC
Confidence            45443  4788888 666667777766  899999999998887765433                   33333333444


Q ss_pred             EEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc--c--
Q psy8152         201 KVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF--A--  275 (444)
Q Consensus       201 ~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h--~--  275 (444)
                      .|. +.-.++.+.+||..   +.+.+.++.....   ...+++++..|+.+...+.|.++|..+ .+.+.++...  .  
T Consensus        98 ~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~  170 (262)
T 3nol_A           98 KIVGLTWKNGLGFVWNIR---NLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPES-LTPVRTITVTAHGEE  170 (262)
T ss_dssp             EEEEEESSSSEEEEEETT---TCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTT-CSEEEEEECEETTEE
T ss_pred             EEEEEEeeCCEEEEEECc---cCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCC-CeEEEEEEeccCCcc
Confidence            444 44568899999999   7888888775432   233445777777766678899999999 8888887642  1  


Q ss_pred             -CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-------------CceeEEEEcCC
Q psy8152         276 -GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-------------SRLTSILVRSD  327 (444)
Q Consensus       276 -~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-------------~~i~~~~~~~~  327 (444)
                       ..++.+.|. +|.+.+..-.+..|.+.|..+++.+..+...             .-.+.+|+.+.
T Consensus       171 ~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~  235 (262)
T 3nol_A          171 LPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE  235 (262)
T ss_dssp             CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred             ccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence             334557776 6665555556889999999999999888642             23588888865

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.01  E-value=6e-08  Score=83.01  Aligned_cols=198  Identities=10%  Similarity=-0.006  Sum_probs=134.6

Q ss_pred             ccCC--CeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         125 NVGP--QLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       125 ~~~~--~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      .|..  ....++|++++.++++.+.  ++.|+++|+.+++.+..+.....                 .....+++.. +.
T Consensus        16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-----------------~fgeGi~~~g-~~   77 (266)
T 2iwa_A           16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-----------------YFGEGLTLLN-EK   77 (266)
T ss_dssp             ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-----------------CCEEEEEEET-TE
T ss_pred             ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-----------------cceEEEEEeC-CE
Confidence            4543  3579999988654444443  58999999999998877653322                 0133455542 24


Q ss_pred             EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-----
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-----  275 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-----  275 (444)
                      +.++.-.++.+.++|..   +.+.+.++... .+ ....++++|+.|+++..++.|.++|..+ .+.+.++.--.     
T Consensus        78 lyv~t~~~~~v~viD~~---t~~v~~~i~~g-~~-~g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~  151 (266)
T 2iwa_A           78 LYQVVWLKNIGFIYDRR---TLSNIKNFTHQ-MK-DGWGLATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRV  151 (266)
T ss_dssp             EEEEETTCSEEEEEETT---TTEEEEEEECC-SS-SCCEEEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEETTEEC
T ss_pred             EEEEEecCCEEEEEECC---CCcEEEEEECC-CC-CeEEEEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECCCCccc
Confidence            44555568899999998   77778877644 11 2344666887777777789999999999 88888877321     


Q ss_pred             CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------CceeEEEEcCCCcccccchhhhhcc
Q psy8152         276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------SRLTSILVRSDFSLENETKKEEQEH  341 (444)
Q Consensus       276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~  341 (444)
                      ..++.+.|. ++...+.....+.|.+.|..+++.+..+...              ...+.+++.++-.        ++++
T Consensus       152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~--------~lfV  222 (266)
T 2iwa_A          152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK--------RIFV  222 (266)
T ss_dssp             CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT--------EEEE
T ss_pred             ccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC--------EEEE
Confidence            246778887 6655555556789999999999999988643              2457898886522        4666


Q ss_pred             ccccCCCccccCCC
Q psy8152         342 SEEKGDSDEKYDPE  355 (444)
Q Consensus       342 s~~~d~~i~~W~~~  355 (444)
                      ++...+.+.+-++.
T Consensus       223 Tgk~~~~v~~i~l~  236 (266)
T 2iwa_A          223 TGKLWPKLFEIKLH  236 (266)
T ss_dssp             EETTCSEEEEEEEE
T ss_pred             ECCCCCeEEEEEEe
Confidence            66555555444443

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.01  E-value=3e-06  Score=85.86  Aligned_cols=273  Identities=9%  Similarity=0.071  Sum_probs=170.1

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeec---ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK---YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      ...|.+|+.. -|.+|+..++..  ..+....   ..-....|.++... +++ .|..|+.++-|.+|+..+........
T Consensus       273 ~g~lWigt~~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D-~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~  347 (795)
T 4a2l_A          273 QNRLWIGTFN-DLNIYHEGTDSF--ASYSSNPVENGSLSQRSVRSIFMD-SQG-GMWLGTYFGGLNYYHPIRNRFKNIRN  347 (795)
T ss_dssp             TSCEEEEESS-CEEEEETTTTEE--EEECCCTTSTTSCSSSCEEEEEEC-TTS-CEEEEESSSCEEEECGGGGSSEEECC
T ss_pred             CCCEEEEeCC-hhheEcCCCCeE--EEEecCCCCCCCCCCCcEEEEEEe-CCc-CEEEEECCCCeEEeCCCcccceEEcC
Confidence            4567777766 578888776652  2221110   00134679999988 444 56678877889999876554332111


Q ss_pred             ec----cccccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccc--------cCCCeEEEEEeccCCEEEEeeCCC
Q psy8152          83 VS----FGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFN--------VGPQLECMKHNKHSNIIATGGKEN  149 (444)
Q Consensus        83 ~~----~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~  149 (444)
                      ..    -....|.++..+. ..|..|+.++-|..|+..+++.......        ....|.+++..+++++|..|+.++
T Consensus       348 ~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~  427 (795)
T 4a2l_A          348 IPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAG  427 (795)
T ss_dssp             CTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTT
T ss_pred             CCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcC
Confidence            00    1134578886543 3566788888899999887655431111        235689999888887577778777


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      -|.+|+..+++... +.....         .    .....|.++...+++.+.+.. . +-|.+|+..   ..... .+.
T Consensus       428 Gl~~~d~~~~~~~~-~~~~~~---------~----l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~---~~~~~-~~~  487 (795)
T 4a2l_A          428 GLSILHRNSGQVEN-FNQRNS---------Q----LVNENVYAILPDGEGNLWLGT-L-SALVRFNPE---QRSFT-TIE  487 (795)
T ss_dssp             EEEEEETTTCCEEE-ECTTTS---------C----CSCSCEEEEEECSSSCEEEEE-S-SCEEEEETT---TTEEE-ECC
T ss_pred             ceeEEeCCCCcEEE-eecCCC---------C----cCCCeeEEEEECCCCCEEEEe-c-CceeEEeCC---CCeEE-Ecc
Confidence            89999988765432 211000         0    011258899988887755544 4 458889977   33221 121


Q ss_pred             -------CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-------cccCceeEEEecCCCCEEEEEEC
Q psy8152         230 -------IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-------GFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       230 -------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                             .....|.++...++|++.+...  +-|..|+..+ ++.  .+.       .+...|.++...++|.+.++. .
T Consensus       488 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~-~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~  561 (795)
T 4a2l_A          488 KEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEG-LDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT-R  561 (795)
T ss_dssp             BCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEET-TEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-S
T ss_pred             ccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCC-CeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-C
Confidence                   1235688999998887666544  4588899876 554  222       134578999998888865543 3


Q ss_pred             CCcEEEEEcCCCceE
Q psy8152         296 DRHFRVHDFHSKKLL  310 (444)
Q Consensus       296 dg~i~vw~~~~~~~~  310 (444)
                      . .|..|+..+++..
T Consensus       562 ~-Gl~~~d~~~~~~~  575 (795)
T 4a2l_A          562 E-GFYCFNEKDKQIK  575 (795)
T ss_dssp             S-CEEEEETTTTEEE
T ss_pred             C-CceeECCCCCcEE
Confidence            4 5888998776553

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.92  E-value=2.2e-07  Score=78.54  Aligned_cols=182  Identities=7%  Similarity=0.057  Sum_probs=128.4

Q ss_pred             eEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc
Q psy8152         130 LECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG  209 (444)
Q Consensus       130 v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~  209 (444)
                      ...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ ....                 ..--.+++.. +++.++.-.++
T Consensus        57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-----------------~FgeGit~~g-~~Ly~ltw~~~  116 (268)
T 3nok_A           57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-----------------IFAEGLASDG-ERLYQLTWTEG  116 (268)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-----------------CCEEEEEECS-SCEEEEESSSC
T ss_pred             cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-----------------cceeEEEEeC-CEEEEEEccCC
Confidence            4688887 4667777888899999999999988776 3222                 0122344433 25555566789


Q ss_pred             eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--cc---CceeEEEec
Q psy8152         210 YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--FA---GCVKDIACP  284 (444)
Q Consensus       210 ~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--h~---~~i~~~~~s  284 (444)
                      .+.+||..   +.+.+.++...... ..++  ++++.|+.+..++.|.++|..+ .+.+.++..  +.   ..++.+.|.
T Consensus       117 ~v~V~D~~---Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~  189 (268)
T 3nok_A          117 LLFTWSGM---PPQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA  189 (268)
T ss_dssp             EEEEEETT---TTEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE
T ss_pred             EEEEEECC---cCcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe
Confidence            99999999   88888888754332 3444  5678888877789999999999 888888773  21   245667776


Q ss_pred             CCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------CceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         285 LNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       285 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                       +|.+.+..-....|.+.|..+++.+..+...              .-.+.+|+.+.-        .++++|+      |
T Consensus       190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~--------~rlfVTG------K  254 (268)
T 3nok_A          190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS--------GRIFMTG------K  254 (268)
T ss_dssp             -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT--------CCEEEEE------T
T ss_pred             -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC--------CEEEEeC------C
Confidence             6665555546789999999999999887632              246888888652        2566665      6


Q ss_pred             ccC
Q psy8152         351 KYD  353 (444)
Q Consensus       351 ~W~  353 (444)
                      .|.
T Consensus       255 ~Wp  257 (268)
T 3nok_A          255 LWP  257 (268)
T ss_dssp             TCS
T ss_pred             CCC
Confidence            775

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.91  E-value=1.7e-07  Score=79.12  Aligned_cols=178  Identities=10%  Similarity=0.059  Sum_probs=123.2

Q ss_pred             ccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEE--EEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          88 GDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLEC--MKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        88 ~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .....+..++ .++++.+.+|.|+++|+.+++.+...  -......  +++. .+.+.+..-.++.+.+||..+.+.+.+
T Consensus        55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~t  131 (268)
T 3nok_A           55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERT  131 (268)
T ss_dssp             CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred             cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence            3335565544 45666777889999999999988755  3334433  4443 234444555689999999999999988


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--C---CCeeEEE
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--D---VALSCIT  239 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~---~~i~~~~  239 (444)
                      +.....                   -..++  ++++.|+.+..++.|+++|..   +.+.+.++...  .   ..++.+.
T Consensus       132 i~~~~e-------------------GwGLt--~Dg~~L~vSdGs~~l~~iDp~---T~~v~~~I~V~~~g~~v~~lNeLe  187 (268)
T 3nok_A          132 TRYSGE-------------------GWGLC--YWNGKLVRSDGGTMLTFHEPD---GFALVGAVQVKLRGQPVELINELE  187 (268)
T ss_dssp             EECSSC-------------------CCCEE--EETTEEEEECSSSEEEEECTT---TCCEEEEEECEETTEECCCEEEEE
T ss_pred             EeCCCc-------------------eeEEe--cCCCEEEEECCCCEEEEEcCC---CCeEEEEEEeCCCCcccccccccE
Confidence            865332                   22333  567777777778999999988   66666665532  1   2345677


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-------------cCceeEEEecCCCCEEEEEE
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-------------AGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~i~~~~~s~~~~~l~s~~  294 (444)
                      |. +|+..+.....+.|.+.|..+ ++.+..+...             ....+.|||+|+++.|+..+
T Consensus       188 ~~-dG~lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          188 CA-NGVIYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             EE-TTEEEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             Ee-CCEEEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            76 776666666788999999999 9988877621             13568899999876555544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.88  E-value=7.3e-07  Score=74.69  Aligned_cols=187  Identities=14%  Similarity=0.113  Sum_probs=128.5

Q ss_pred             ccC--CCeEEEEEeccCCEEEEeeCC--CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-
Q psy8152         125 NVG--PQLECMKHNKHSNIIATGGKE--NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-  199 (444)
Q Consensus       125 ~~~--~~v~~~~~~~~~~~l~~~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  199 (444)
                      .|.  .-...+.|++ +.++.+.+..  ..|+.+|+.+++.+........                   .......+.+ 
T Consensus        16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-------------------~fgeGi~~~~~   75 (243)
T 3mbr_X           16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-------------------YFGAGIVAWRD   75 (243)
T ss_dssp             ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-------------------CCEEEEEEETT
T ss_pred             CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-------------------cceeEEEEeCC
Confidence            454  3466889986 5555666654  4899999999999887765443                   3333233334 


Q ss_pred             CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc----
Q psy8152         200 DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA----  275 (444)
Q Consensus       200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~----  275 (444)
                      ++.+..-.++.+.+||..   +.+.+.++...... ..+  .+++..|+.+..++.|.++|..+ .+.+.++....    
T Consensus        76 ~ly~ltw~~~~v~v~D~~---tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t-~~~~~~I~V~~~g~~  148 (243)
T 3mbr_X           76 RLIQLTWRNHEGFVYDLA---TLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDT-LQQVGSIKVTAGGRP  148 (243)
T ss_dssp             EEEEEESSSSEEEEEETT---TTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTT-CCEEEEEECEETTEE
T ss_pred             EEEEEEeeCCEEEEEECC---cCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCC-CeEEEEEEEccCCcc
Confidence            444455678999999999   88888888754332 344  45677777767788999999999 88888877321    


Q ss_pred             -CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------CceeEEEEcCCCcccccchhhhhc
Q psy8152         276 -GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------SRLTSILVRSDFSLENETKKEEQE  340 (444)
Q Consensus       276 -~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~  340 (444)
                       ..++.+.|. +|+..+..-....|.+.|..+++.+..+...              .-.+.+++.+.-        .+++
T Consensus       149 ~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~--------~~lf  219 (243)
T 3mbr_X          149 LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH--------DRLF  219 (243)
T ss_dssp             CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT--------TEEE
T ss_pred             cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC--------CEEE
Confidence             345666665 5665555446789999999999999887632              235788887652        2566


Q ss_pred             cccccCCCccccC
Q psy8152         341 HSEEKGDSDEKYD  353 (444)
Q Consensus       341 ~s~~~d~~i~~W~  353 (444)
                      +++      |.|.
T Consensus       220 VTG------K~wp  226 (243)
T 3mbr_X          220 VTG------KRWP  226 (243)
T ss_dssp             EEE------TTCS
T ss_pred             EEC------CCCC
Confidence            665      6775

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.85  E-value=5.3e-06  Score=76.16  Aligned_cols=238  Identities=9%  Similarity=0.007  Sum_probs=138.9

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~   93 (444)
                      ...|+.+++.....     ..+.  .....+..++|. +....|+ +-...+.|+.+++........+........-+++
T Consensus        95 ~~~I~~i~~~~~~~-----~~~~--~~~~~~~gl~~d-~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav  166 (386)
T 3v65_B           95 RIDIRQVLPHRSEY-----TLLL--NNLENAIALDFH-HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV  166 (386)
T ss_dssp             BSCEEEECTTSCCC-----EEEE--CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred             CccceeeccCCCcE-----EEEe--cCCCccEEEEEe-cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence            35677777765542     1111  223457899999 4455555 5455688999998765533332211112233566


Q ss_pred             EeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe-eCC-CeEEEEEcCCceeeeeeecccc
Q psy8152          94 SRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG-GKE-NDLKLWDLNTTKNIFSAKNVSH  170 (444)
Q Consensus        94 s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~vwd~~~~~~~~~~~~~~~  170 (444)
                      .+.+.. +++-...+.|.+.++..................+++.|.+..|+.+ ... +.|..+++..............
T Consensus       167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~  246 (386)
T 3v65_B          167 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF  246 (386)
T ss_dssp             ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred             EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC
Confidence            765544 4555556788888877544332222333567899999855555544 334 6788888764322221111111


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                                        +.+.|+++|++..|. +-+..+.|..+++.   .......+.........|++ ..+.++++
T Consensus       247 ------------------~PnGlavd~~~~~lY~aD~~~~~I~~~d~d---G~~~~~~~~~~~~~P~giav-~~~~ly~t  304 (386)
T 3v65_B          247 ------------------WPNGLTIDYAGRRMYWVDAKHHVIERANLD---GSHRKAVISQGLPHPFAITV-FEDSLYWT  304 (386)
T ss_dssp             ------------------CEEEEEEEGGGTEEEEEETTTTEEEEECTT---SCSCEEEECSSCSSEEEEEE-ETTEEEEE
T ss_pred             ------------------CeeeEEEeCCCCEEEEEECCCCEEEEEeCC---CCeeEEEEECCCCCceEEEE-ECCEEEEe
Confidence                              478999998765554 44567789999987   22222222223344577888 45566677


Q ss_pred             EcCCCcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC  283 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~  283 (444)
                      ....+.|..++..+ ++.+..+.........|++
T Consensus       305 d~~~~~V~~~~~~~-G~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          305 DWHTKSINSANKFT-GKNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             ETTTTEEEEEETTT-CCSCEEEECSCSCCCCEEE
T ss_pred             eCCCCeEEEEECCC-CcceEEEccCCCCCceEEE
Confidence            77788899998767 7777766543333444443

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.85  E-value=1.8e-06  Score=72.40  Aligned_cols=181  Identities=11%  Similarity=0.048  Sum_probs=120.2

Q ss_pred             ccEEEEEeCCCe-EEEEecC--CcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCCceeee
Q psy8152          88 GDIVGVSRYDEC-ILTAVKS--GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNTTKNIF  163 (444)
Q Consensus        88 ~~v~~~s~~~~~-l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~  163 (444)
                      .....+..++.. +.+.+..  ..|+++|+.+++.+... .-..........+.++ +....-.++.+.+||..+.+.+.
T Consensus        21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~   99 (243)
T 3mbr_X           21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA   99 (243)
T ss_dssp             CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred             cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence            344556554454 4555554  48999999999987633 3233333333333334 44445568999999999999988


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----CCeeEE
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-----VALSCI  238 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~~  238 (444)
                      ++.....                   -..++  ++++.|+++..++.|.++|..   +.+.+.++....     ..++-+
T Consensus       100 ti~~~~~-------------------Gwglt--~dg~~L~vSdgs~~l~~iDp~---t~~~~~~I~V~~~g~~~~~lNeL  155 (243)
T 3mbr_X          100 RFRYPGE-------------------GWALT--SDDSHLYMSDGTAVIRKLDPD---TLQQVGSIKVTAGGRPLDNLNEL  155 (243)
T ss_dssp             EEECSSC-------------------CCEEE--ECSSCEEEECSSSEEEEECTT---TCCEEEEEECEETTEECCCEEEE
T ss_pred             EEeCCCC-------------------ceEEe--eCCCEEEEECCCCeEEEEeCC---CCeEEEEEEEccCCcccccceee
Confidence            8865433                   22343  567666666678899999998   666666665421     234566


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-------------cCceeEEEecCCCCEEEEEEC
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-------------AGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      .|. +|+..+.......|.+.|.++ ++.+..+...             ....+.|+++|+++.|+..+.
T Consensus       156 e~~-~G~lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          156 EWV-NGELLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EEE-TTEEEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             EEe-CCEEEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            665 676666666788999999999 9988877621             125688999998876666553

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.83  E-value=1.4e-05  Score=80.83  Aligned_cols=275  Identities=11%  Similarity=0.099  Sum_probs=164.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeee--------ec--ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQN--------VK--YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF   74 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~--------~~--~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~   74 (444)
                      ....|.+|+..+-|.+++..+...  ..+..        ..  ..-....|.++... .++ .|..|+.++-|..|+..+
T Consensus       267 ~~g~lWigt~~~Gl~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D-~~g-~lWigt~~~Gl~~~~~~~  342 (781)
T 3v9f_A          267 KDNKLWIATELNGIMILDLQQNQF--LLPEQIRFEFIREGDNNYSLSNASARYIFQD-SFN-NIWIGTWGGGINFISNAP  342 (781)
T ss_dssp             TTSEEEEEESSSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEEC-SSC-CEEEEEBSSCEEEECSSC
T ss_pred             CCCCEEEEeCCCCeEEECCCCCee--eeeeccccccccCCCCCCCCCCCeEEEEEEe-CCC-CEEEEecCCeEEEeCCCC
Confidence            346678888766788888876652  11111        00  00234679999888 444 577788778899998876


Q ss_pred             Cccccceee-------ccccccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccc---cccCCCeEEEEEeccCCEEE
Q psy8152          75 KNFNTNTDV-------SFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTN---FNVGPQLECMKHNKHSNIIA  143 (444)
Q Consensus        75 ~~~~~~~~~-------~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~  143 (444)
                      .........       .-....|.++..+. ..|..|+.++-|..|+..++......   ......|.++...+++. |.
T Consensus       343 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lW  421 (781)
T 3v9f_A          343 PTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LW  421 (781)
T ss_dssp             CSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EE
T ss_pred             CcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EE
Confidence            544322110       01235678886653 45677777777899997655433211   11345688888877665 44


Q ss_pred             EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc
Q psy8152         144 TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR  223 (444)
Q Consensus       144 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  223 (444)
                      .|+..+-|..++..+++... +....               .....|.++...+++.+. .|+. +-|.+|+..   ...
T Consensus       422 igt~~~Gl~~~~~~~~~~~~-~~~~~---------------~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~---~~~  480 (781)
T 3v9f_A          422 FGTYLGNISYYNTRLKKFQI-IELEK---------------NELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLA---SKK  480 (781)
T ss_dssp             EEETTEEEEEECSSSCEEEE-CCSTT---------------TCCCCEEEEEECTTSEEE-EEET-TEEEEEESS---SSS
T ss_pred             EEeccCCEEEEcCCCCcEEE-eccCC---------------CCCCeEEEEEECCCCCEE-EEEC-CceEEEeCC---CCe
Confidence            56666678889887665332 21100               001258888888776544 4555 568889987   322


Q ss_pred             ceEEEeCC-----CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc----ccCceeEEEecCCCCEEEEEE
Q psy8152         224 PVLKVDIP-----DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG----FAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       224 ~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      ........     ...|.++...++|++.+ |+..+-|..|+..+ ++ +..+..    ....|.++...++|.+.++ +
T Consensus       481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~-~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T  556 (781)
T 3v9f_A          481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDM-QL-VRKFNQYEGFCSNTINQIYRSSKGQMWLA-T  556 (781)
T ss_dssp             CCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTC-CE-EEEECTTTTCSCSCEEEEEECTTSCEEEE-E
T ss_pred             EEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCC-Ce-EEEccCCCCCCCCeeEEEEECCCCCEEEE-E
Confidence            22211111     35688999988887655 44434477888776 43 333321    2356889998888875554 4


Q ss_pred             CCCcEEEEEcCCCce
Q psy8152         295 LDRHFRVHDFHSKKL  309 (444)
Q Consensus       295 ~dg~i~vw~~~~~~~  309 (444)
                      ..|.|..|+..+++.
T Consensus       557 ~~Glv~~~d~~~~~~  571 (781)
T 3v9f_A          557 GEGLVCFPSARNFDY  571 (781)
T ss_dssp             TTEEEEESCTTTCCC
T ss_pred             CCCceEEECCCCCcE
Confidence            466558888877654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.83  E-value=1.7e-05  Score=71.71  Aligned_cols=236  Identities=10%  Similarity=0.016  Sum_probs=136.5

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEEE
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS   94 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s   94 (444)
                      ..|+..++.....     ..+.  .....+..++|. +....|+ +-...+.|+.+++........+........-.++.
T Consensus        53 ~~I~~i~~~g~~~-----~~~~--~~~~~~~~l~~d-~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd  124 (349)
T 3v64_C           53 IDIRQVLPHRSEY-----TLLL--NNLENAIALDFH-HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVD  124 (349)
T ss_dssp             SCEEEECTTSCCE-----EEEE--CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE
T ss_pred             cceEEEeCCCCee-----EEee--cCCCceEEEEEe-ccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEe
Confidence            4566666655432     1111  223457899999 4555555 44456889999987655433322111123345666


Q ss_pred             eCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE-EEeeCC-CeEEEEEcCCceeeeeeecccce
Q psy8152          95 RYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII-ATGGKE-NDLKLWDLNTTKNIFSAKNVSHR  171 (444)
Q Consensus        95 ~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d-~~i~vwd~~~~~~~~~~~~~~~~  171 (444)
                      +.+.. +++-...+.|.+.++..................+++.|.+..| ++-... +.|..+++.............  
T Consensus       125 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~--  202 (349)
T 3v64_C          125 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL--  202 (349)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC--
T ss_pred             cCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC--
Confidence            65544 4555567889999987554332222334567899999954444 444444 778888876432221111111  


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG  250 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  250 (444)
                                      .+.+.|+++|++..|. +-...+.|..+++.   .......+.........|++ ..+.++++-
T Consensus       203 ----------------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d---G~~~~~~~~~~~~~P~giav-~~~~ly~td  262 (349)
T 3v64_C          203 ----------------FWPNGLTIDYAGRRMYWVDAKHHVIERANLD---GSHRKAVISQGLPHPFAITV-FEDSLYWTD  262 (349)
T ss_dssp             ----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEECSSCSSEEEEEE-ETTEEEEEE
T ss_pred             ----------------CCcceEEEeCCCCEEEEEECCCCEEEEEeCC---CCceEEEEeCCCCCceEEEE-ECCEEEEec
Confidence                            1478999998775554 44567789999988   22111112223344577887 356666677


Q ss_pred             cCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152         251 STTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA  282 (444)
Q Consensus       251 ~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~  282 (444)
                      ...+.|..++..+ ++.+..+.........++
T Consensus       263 ~~~~~V~~~~~~~-G~~~~~i~~~~~~p~gi~  293 (349)
T 3v64_C          263 WHTKSINSANKFT-GKNQEIIRNKLHFPMDIH  293 (349)
T ss_dssp             TTTTEEEEEETTT-CCSCEEEECSCSCCCCEE
T ss_pred             CCCCeEEEEEccC-CCccEEeccCCCCCceEE
Confidence            7778888888666 766666653333333443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.82  E-value=8.4e-06  Score=72.31  Aligned_cols=237  Identities=8%  Similarity=-0.056  Sum_probs=135.2

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC--cEEEEEcCCCCcc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG--DVKLWRYKTEPDQ  120 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~  120 (444)
                      .....++|+ +++.++++....+.|..|+... .....+.. .....-.++.++++++++.....  .|..++..+++..
T Consensus        32 ~~pegia~~-~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           32 TFLENLASA-PDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             CCEEEEEEC-TTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCcceEEEC-CCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            567889999 6787666666789999999864 33333322 22222344567788665544332  4666777776654


Q ss_pred             ccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         121 WTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       121 ~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      . +..  .......++..+.+..+++....+.|.++|...++ .+........   .  ..+.    ......+.|  +|
T Consensus       109 ~-~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~---~--~~~~----~~~~~pngi--s~  176 (306)
T 2p4o_A          109 T-LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA---R--SNSE----SVFPAANGL--KR  176 (306)
T ss_dssp             E-EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS---C--SSTT----CCSCSEEEE--EE
T ss_pred             E-EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc---c--cccc----CCCCcCCCc--Cc
Confidence            2 221  12233455555555445555467889999987543 1211111000   0  0000    000124455  78


Q ss_pred             CCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce--eEeccc
Q psy8152         198 NSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC--YKYKGF  274 (444)
Q Consensus       198 ~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~h  274 (444)
                      ++++|+ +-...+.|..|++...........+.. ......+++.++|+++++....+.|.+++..  ++..  ..+...
T Consensus       177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~~~~~~~  253 (306)
T 2p4o_A          177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTIIAQAEQG  253 (306)
T ss_dssp             ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEEECGGGT
T ss_pred             CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEEeecccc
Confidence            886554 555678999999871111111111211 1345779999999887777778889999964  5542  233333


Q ss_pred             cCceeEEEec---CCCCEEEEEECCC
Q psy8152         275 AGCVKDIACP---LNENLILSVSLDR  297 (444)
Q Consensus       275 ~~~i~~~~~s---~~~~~l~s~~~dg  297 (444)
                      ....++++|.   |+++.|+.++..+
T Consensus       254 ~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          254 VIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             cCCceEEEEecccCCCCEEEEECCCC
Confidence            3567899998   8887777666543

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.82  E-value=3.4e-05  Score=77.96  Aligned_cols=274  Identities=12%  Similarity=0.110  Sum_probs=160.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecc---cCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY---ITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      ...|.+|+.. -|.+|+..+++.  ..+.....   .-....|.++... + ...|..|+..+-|.+++..++.......
T Consensus       221 ~g~lwigt~~-Gl~~~d~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~d-~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~  295 (781)
T 3v9f_A          221 NGNIWIGTSK-GLALFNANTETF--TNFHNNPGNIHGALSSYIFSIKQL-K-DNKLWIATELNGIMILDLQQNQFLLPEQ  295 (781)
T ss_dssp             TCCEEEEETT-EEEEEETTTTEE--EC-----------CCCCEEEEEEC-T-TSEEEEEESSSCEEEEETTCC-------
T ss_pred             CCCEEEEeCC-cHheECCCCCcE--EEEEcCCCccccccCceEEEEEEC-C-CCCEEEEeCCCCeEEECCCCCeeeeeec
Confidence            4557777766 578888766652  11111100   0124578999887 3 4456667765678889987665432211


Q ss_pred             -------e-----ccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCcccccc---------ccCCCeEEEEEeccCC
Q psy8152          83 -------V-----SFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNF---------NVGPQLECMKHNKHSN  140 (444)
Q Consensus        83 -------~-----~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~  140 (444)
                             .     .-....|.++..+ ...|..|+.++-|..++...........         .....|.+++..+++.
T Consensus       296 ~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~  375 (781)
T 3v9f_A          296 IRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK  375 (781)
T ss_dssp             --CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC
T ss_pred             cccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC
Confidence                   0     0124567777554 2356778878889999877655432110         0235688888877665


Q ss_pred             EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC
Q psy8152         141 IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT  220 (444)
Q Consensus       141 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  220 (444)
                       |..|+.++-|.+|+..++.... +.....              .....|.++...+++.+. +|+..+-|..|+..   
T Consensus       376 -lWigt~~~Gl~~~~~~~~~~~~-~~~~~~--------------~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~---  435 (781)
T 3v9f_A          376 -LWIGTDGGGINVFENGKRVAIY-NKENRE--------------LLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTR---  435 (781)
T ss_dssp             -EEEEEBSSCEEEEETTEEEEEC-C-------------------CCCSBEEEEEECTTSCEE-EEETTEEEEEECSS---
T ss_pred             -EEEEeCCCcEEEEECCCCeEEE-ccCCCC--------------CCCcceEEEEECCCCCEE-EEeccCCEEEEcCC---
Confidence             5566656668889987543221 110000              011258899888777654 46776778888876   


Q ss_pred             CccceEEEe---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-----cCceeEEEecCCCCEEEE
Q psy8152         221 QRRPVLKVD---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-----AGCVKDIACPLNENLILS  292 (444)
Q Consensus       221 ~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-----~~~i~~~~~s~~~~~l~s  292 (444)
                      ..+ ...+.   .....|.++...+++++.+ |+. +-|.+|+..+ ++........     ...|.++...++|.+.+ 
T Consensus       436 ~~~-~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-  510 (781)
T 3v9f_A          436 LKK-FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-  510 (781)
T ss_dssp             SCE-EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-
T ss_pred             CCc-EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEE-
Confidence            332 22222   2345688998888876554 444 4588999876 5443322211     35789999988887555 


Q ss_pred             EECCCcEEEEEcCCCce
Q psy8152         293 VSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       293 ~~~dg~i~vw~~~~~~~  309 (444)
                      |+..+-|..|+..+++.
T Consensus       511 gt~~~Gl~~~~~~~~~~  527 (781)
T 3v9f_A          511 GTFGGGVGIYTPDMQLV  527 (781)
T ss_dssp             EESSSCEEEECTTCCEE
T ss_pred             EEcCCCEEEEeCCCCeE
Confidence            45544477888876654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.82  E-value=2.3e-06  Score=76.65  Aligned_cols=232  Identities=11%  Similarity=-0.012  Sum_probs=136.6

Q ss_pred             EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc--------------------ccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152          91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF--------------------NVGPQLECMKHNK-HSNIIATGGKEN  149 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l~~~~~d~  149 (444)
                      .++.+++++++++..++.|..|+..++.... +.                    .....+..+++.+ +++ |+.+...+
T Consensus        24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~  101 (322)
T 2fp8_A           24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYY  101 (322)
T ss_dssp             EECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTT
T ss_pred             EEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCC
Confidence            4456777878888888999999877654331 11                    1123578899997 554 55554445


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeC-----------------CceE
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSK-----------------QGYV  211 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i  211 (444)
                      .|..++..++.. ..+.....          +   ........+++.| +|+++++-..                 .+.|
T Consensus       102 ~i~~~d~~~g~~-~~~~~~~~----------~---~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v  167 (322)
T 2fp8_A          102 HLSVVGSEGGHA-TQLATSVD----------G---VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL  167 (322)
T ss_dssp             EEEEECTTCEEC-EEEESEET----------T---EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred             CEEEEeCCCCEE-EEecccCC----------C---CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence            588888765432 11111000          0   0001367899999 8877766432                 3778


Q ss_pred             EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCc--ceeEeccccCceeEEEecCCCC
Q psy8152         212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGK--PCYKYKGFAGCVKDIACPLNEN  288 (444)
Q Consensus       212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~--~~~~~~~h~~~i~~~~~s~~~~  288 (444)
                      ..||..   ...... +.........|+|+|++++|+++ +..+.|++|++.. ..  ....+....+ ...+++.++|+
T Consensus       168 ~~~d~~---~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~-~~~~~~~~~~~~~g-P~gi~~d~~G~  241 (322)
T 2fp8_A          168 IKYDPS---TKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG-PKKGTAEVLVKIPN-PGNIKRNADGH  241 (322)
T ss_dssp             EEEETT---TTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS-TTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred             EEEeCC---CCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC-CcCCccceEEeCCC-CCCeEECCCCC
Confidence            888876   332211 11111234679999999866554 5668899999874 21  1112211223 67899999998


Q ss_pred             EEEEEEC----------CCcEEEEEcCCCceEEEeecC-----CceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         289 LILSVSL----------DRHFRVHDFHSKKLLRKDYMQ-----SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       289 ~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      +.++...          .+.|..++.. ++.+..+...     ..+..+++.          ++.+.++....+.|.+++
T Consensus       242 l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~----------~g~L~v~~~~~~~i~~~~  310 (322)
T 2fp8_A          242 FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH----------DGLLYIGTLFHGSVGILV  310 (322)
T ss_dssp             EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE----------TTEEEEECSSCSEEEEEE
T ss_pred             EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe----------CCEEEEeecCCCceEEEe
Confidence            7666544          4567888764 6666665432     234445432          234555555566676666


Q ss_pred             CC
Q psy8152         354 PE  355 (444)
Q Consensus       354 ~~  355 (444)
                      +.
T Consensus       311 ~~  312 (322)
T 2fp8_A          311 YD  312 (322)
T ss_dssp             C-
T ss_pred             cc
Confidence            54

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.80  E-value=3.3e-05  Score=68.74  Aligned_cols=227  Identities=14%  Similarity=0.085  Sum_probs=132.9

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCC---ccccc-eeeccccccE
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFK---NFNTN-TDVSFGEGDI   90 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~---~~~~~-~~~~~~~~~v   90 (444)
                      ..|+..++......    ..+   .....+.+++|. +.++.|+ +-...+.|+.+++.+.   ..... +........-
T Consensus        10 ~~I~~i~~~~~~~~----~~~---~~~~~p~g~~~d-~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g   81 (316)
T 1ijq_A           10 HEVRKMTLDRSEYT----SLI---PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (316)
T ss_dssp             SSEEEEETTSCCCE----EEE---CSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             CeEEEEECCCcceE----ehh---cCCCceEEEEEE-eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence            46889998876631    112   224567899999 5555555 4455689999998751   22221 2111112334


Q ss_pred             EEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-C-CeEEEEEcCCceeeeeee-
Q psy8152          91 VGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-E-NDLKLWDLNTTKNIFSAK-  166 (444)
Q Consensus        91 ~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vwd~~~~~~~~~~~-  166 (444)
                      .++.+.+.. +++-...+.|.++++..................+++.|.+..|+.+.. . +.|..+++.... ...+. 
T Consensus        82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~  160 (316)
T 1ijq_A           82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT  160 (316)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEEC
T ss_pred             EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEE
Confidence            556665544 455566789999998754433212223456789999995555554443 2 678888876422 22221 


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH  245 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  245 (444)
                      ..-.                  +.+.|+++|++..|.. -+..+.|..+++. ....+.+............|++. .+.
T Consensus       161 ~~~~------------------~P~gla~d~~~~~lY~~D~~~~~I~~~d~d-g~~~~~~~~~~~~~~~P~giav~-~~~  220 (316)
T 1ijq_A          161 ENIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVF-EDK  220 (316)
T ss_dssp             SSCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEE-TTE
T ss_pred             CCCC------------------CceEEEEeccCCEEEEEECCCCeEEEEecC-CCceEEEeecCCccCCcEEEEEE-CCE
Confidence            1111                  5789999987765554 4567799999998 22222222211122345678875 466


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      ++++-...+.|..++..+ ++.+..+.
T Consensus       221 ly~~d~~~~~V~~~~~~~-g~~~~~i~  246 (316)
T 1ijq_A          221 VFWTDIINEAIFSANRLT-GSDVNLLA  246 (316)
T ss_dssp             EEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred             EEEEECCCCeEEEEeCCC-CcceEEEe
Confidence            666777778899999877 77666664

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.79  E-value=2.9e-07  Score=90.99  Aligned_cols=275  Identities=7%  Similarity=-0.042  Sum_probs=144.6

Q ss_pred             CcccEEEecCCC-----------cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeC
Q psy8152           5 DDYNIYIGSSTG-----------AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDT   72 (444)
Q Consensus         5 ~~~~l~~g~~dg-----------~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~   72 (444)
                      ++..++.|+.++           .+.+||+.+++.  ..+..+.. .+.....++++. .++..+++|+. +..+.+||.
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w--~~~~~~~~-~~~~~~~~~~~~-~~g~lyv~GG~~~~~v~~yd~  272 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV--SDRTVTVT-KHDMFCPGISMD-GNGQIVVTGGNDAKKTSLYDS  272 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB--CCCEEEEC-SCCCSSCEEEEC-TTSCEEEECSSSTTCEEEEEG
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcE--EeCcccCC-CCCCccccccCC-CCCCEEEeCCCCCCceEEecC
Confidence            556677766432           578888887763  22222211 233334456777 67888888884 468999999


Q ss_pred             CCCccccceeeccccc-cEEEEEeCCCeEEEEe-cC-----CcEEEEEcCCCCccccc----cccCCCeEEEEEeccCCE
Q psy8152          73 DFKNFNTNTDVSFGEG-DIVGVSRYDECILTAV-KS-----GDVKLWRYKTEPDQWTN----FNVGPQLECMKHNKHSNI  141 (444)
Q Consensus        73 ~~~~~~~~~~~~~~~~-~v~~~s~~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~  141 (444)
                      .+.+....-..+.... ....+.+++++++.|+ .+     ..+.+||..+.+.....    ......-....+..++..
T Consensus       273 ~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~i  352 (656)
T 1k3i_A          273 SSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHA  352 (656)
T ss_dssp             GGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred             cCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCce
Confidence            8776554332222222 2233345899999888 34     56899998876533210    000000000111224445


Q ss_pred             EEEeeCC---------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCc--
Q psy8152         142 IATGGKE---------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQG--  209 (444)
Q Consensus       142 l~~~~~d---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~--  209 (444)
                      ++.|+.+         ..+..||..+............. .  ...|      .+..-.++.|.. ++++++.|+.++  
T Consensus       353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~-~--~~~~------~~~~~~av~~~~~~~~i~v~GG~~~~~  423 (656)
T 1k3i_A          353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN-R--GVAP------DAMCGNAVMYDAVKGKILTFGGSPDYQ  423 (656)
T ss_dssp             CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET-T--EECC------CCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred             EEEECCCCcEEEecCccceeeeecCCcceeecCCccccc-c--ccCC------CCCCCceEeccCCCCeEEEEeCCCCCC
Confidence            5555444         35677887765433221110000 0  0000      000123444443 567778877532  


Q ss_pred             ---------eEEEEEcCCCCCccceE--EEeCCCCCeeEEEEccCCCEEEEEcCC-----------CcEEEEEcCCCCcc
Q psy8152         210 ---------YVRVYDPKITTQRRPVL--KVDIPDVALSCITTTNQSHYVIVGSTT-----------GDMMAVDLRGKGKP  267 (444)
Q Consensus       210 ---------~i~i~d~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~  267 (444)
                               .|.+||.. ......+.  .+. ....-.+++..|++++++.|+.+           ..+.+||..+ .+-
T Consensus       424 ~~~~~~~~~~v~~yd~~-~~~W~~~~~~~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t-~~W  500 (656)
T 1k3i_A          424 DSDATTNAHIITLGEPG-TSPNTVFASNGLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ-DTF  500 (656)
T ss_dssp             SSBCCCCEEEEECCSTT-SCCEEEECTTCCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG-TEE
T ss_pred             CCCcCCcceEEEcCCCC-CCCeeEEccCCCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC-Cce
Confidence                     67788877 22221111  111 11222455677899999998754           4689999876 432


Q ss_pred             e--eEeccccCceeEEEecCCCCEEEEEEC
Q psy8152         268 C--YKYKGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       268 ~--~~~~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      .  ..+...........+.|++++++.|+.
T Consensus       501 ~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          501 YKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            1  111111222234456689999999885

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.76  E-value=3.6e-05  Score=70.95  Aligned_cols=240  Identities=13%  Similarity=0.083  Sum_probs=138.9

Q ss_pred             CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCCCc----cccceeeccccc
Q psy8152          14 STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDFKN----FNTNTDVSFGEG   88 (444)
Q Consensus        14 ~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~----~~~~~~~~~~~~   88 (444)
                      ....|+..++.....     ..+.  .....+..|+|. +....|+.+ ...+.|+.+++....    ....+.......
T Consensus        90 ~~~~I~~i~l~~~~~-----~~~~--~~~~~~~~l~~d-~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p  161 (400)
T 3p5b_L           90 NRHEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP  161 (400)
T ss_dssp             ETTEEEEECTTSCSC-----EEEE--CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred             ccceeEEEccCCcce-----eEec--cccCcceEEeee-eccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence            346788888776552     1111  335678899999 555555544 456889999886522    222221111122


Q ss_pred             cEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-C-CCeEEEEEcCCceeeeee
Q psy8152          89 DIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-K-ENDLKLWDLNTTKNIFSA  165 (444)
Q Consensus        89 ~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~vwd~~~~~~~~~~  165 (444)
                      .-+++.+.+ +++++-...+.|.+.++..................|++.|.+..|+.+. . .+.|...++.........
T Consensus       162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~  241 (400)
T 3p5b_L          162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV  241 (400)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred             ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence            234556644 4555555678899999876554322223445578999999555555443 2 367888887653322222


Q ss_pred             ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      ...-.                  +.+.|+++|.+..|..+ ...+.|..+++. ....+.+......-.....|++. .+
T Consensus       242 ~~~l~------------------~P~glavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~l~~P~gl~v~-~~  301 (400)
T 3p5b_L          242 TENIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVF-ED  301 (400)
T ss_dssp             CSSCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCCEEEEECSSTTSSEEEEEEE-TT
T ss_pred             ECCCC------------------ceEEEEEEeCCCEEEEEECCCCEEEEEeCC-CCccEEEEeCCCCCCCCEEEEEe-CC
Confidence            11112                  57899999877666555 557799999988 22222222211122334567763 44


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA  282 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~  282 (444)
                      .++++-...+.|..++..+ ++.+..+.........++
T Consensus       302 ~lywtd~~~~~V~~~~~~~-G~~~~~i~~~~~~p~~i~  338 (400)
T 3p5b_L          302 KVFWTDIINEAIFSANRLT-GSDVNLLAENLLSPEDMV  338 (400)
T ss_dssp             EEEEEESSSCSEEEEESSS-CCCCEEEECSCSCEEEEE
T ss_pred             EEEEecCCCCeEEEEEcCC-CCceEEEecCCCCCceEE
Confidence            5666677778899999877 777777764444445553

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.75  E-value=5.5e-06  Score=77.17  Aligned_cols=238  Identities=11%  Similarity=0.106  Sum_probs=136.6

Q ss_pred             ceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec-CC----cEEEEEcCCC
Q psy8152          44 SVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK-SG----DVKLWRYKTE  117 (444)
Q Consensus        44 ~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~-dg----~i~iw~~~~~  117 (444)
                      ....|+++ | +...|+++...+.|+.+++.++....... ......-+++++++++|+++.. .+    .+.+++. .+
T Consensus       138 ~P~~lavd-p~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g  214 (430)
T 3tc9_A          138 GAVWLSFD-PKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES  214 (430)
T ss_dssp             CCCEEEEE-TTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred             CCCEEEEC-CCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence            45788999 5 45667766665889999988766544332 2223344667788886666554 22    2333443 33


Q ss_pred             Cccc-cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         118 PDQW-TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       118 ~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      .... ...........++++| ++.++++-...+.|..++...+..........                 ..+.+.|+|
T Consensus       215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----------------~~~P~gia~  277 (430)
T 3tc9_A          215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----------------SGWEFHIQF  277 (430)
T ss_dssp             TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------SSCCEEEEE
T ss_pred             ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----------------CCcceeEEE
Confidence            2221 1112234467888999 77777776678899999988655421111111                 014788999


Q ss_pred             ecCCC-EEEEEeCCceEEEEEcCCCCCcc--ceEEEeCC---------------CCCee-EEEEc--------cCCCEEE
Q psy8152         196 LPNSD-KVAVCSKQGYVRVYDPKITTQRR--PVLKVDIP---------------DVALS-CITTT--------NQSHYVI  248 (444)
Q Consensus       196 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~---------------~~~i~-~~~~~--------~~~~~l~  248 (444)
                      +|+++ ++++-...+.|..++.. .....  .+..+.+.               -.... .++..        +++.+++
T Consensus       278 ~pdG~~lyv~d~~~~~I~~~~~d-~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyv  356 (430)
T 3tc9_A          278 HPSGNYAYIVVVNQHYILRSDYD-WKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYF  356 (430)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEE
T ss_pred             cCCCCEEEEEECCCCEEEEEeCC-cccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEE
Confidence            99998 45555678899998876 11111  11222211               00122 44443        3466666


Q ss_pred             EEcCCCcEEEEEcCCCCcceeEeccc------------------cCceeEEEecCC-CCEEEEEECCCcEEEEEcC
Q psy8152         249 VGSTTGDMMAVDLRGKGKPCYKYKGF------------------AGCVKDIACPLN-ENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       249 ~~~~dg~i~iwd~~~~~~~~~~~~~h------------------~~~i~~~~~s~~-~~~l~s~~~dg~i~vw~~~  305 (444)
                      +-...+.|+.++. . +... ++.+.                  -.....|++.|+ +.++++-.....|+.+++.
T Consensus       357 aD~~n~~I~~i~~-~-G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          357 CDRENHCIRILTP-Q-GRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             EEGGGTEEEEECT-T-SEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EECCCcEEEEECC-C-CcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            6666777888873 3 4332 22211                  114678889884 5555555556777777653

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.75  E-value=2.8e-05  Score=70.21  Aligned_cols=254  Identities=9%  Similarity=-0.048  Sum_probs=146.2

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ...+|.+.. + ..+|+.+.. ..|+..++........+.. .......++.+....|+ +-...+.|+.+++.......
T Consensus        34 d~~~C~~~~-~-~~~ll~~~~-~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~  109 (349)
T 3v64_C           34 DRRSCKALG-P-EPVLLFANR-IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE  109 (349)
T ss_dssp             TSSCEEESS-S-CCEEEEECB-SCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CCCcccccc-c-CceeEeecc-cceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence            345666666 3 345554443 5688888875544333321 11222234455555544 44567889999987665432


Q ss_pred             cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152         122 TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  200 (444)
                      ...........+++.+ .++++++-...+.|.+.++........+.....                  ....+++.|.+.
T Consensus       110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~------------------~P~~iavdp~~g  171 (349)
T 3v64_C          110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE------------------KPRAIALHPMEG  171 (349)
T ss_dssp             EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS------------------CEEEEEEETTTT
T ss_pred             EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC------------------CcceEEEecCcC
Confidence            2222234467889987 455556666678899999875432222211111                  378899998665


Q ss_pred             EEE-EEeCC-ceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         201 KVA-VCSKQ-GYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       201 ~l~-~~~~d-~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      .|+ +-... +.|..+++.   . .....+ ...-.....|+++|++..|+ +-...+.|..+++.. ......+.....
T Consensus       172 ~ly~td~~~~~~I~r~~~d---G-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~  246 (349)
T 3v64_C          172 TIYWTDWGNTPRIEASSMD---G-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLP  246 (349)
T ss_dssp             EEEEEECSSSCEEEEEETT---S-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCS
T ss_pred             eEEEeccCCCCEEEEEeCC---C-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCC
Confidence            554 44444 788888887   1 122222 22234468999998655554 455667899999874 333323333334


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec-CCceeEEEE
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM-QSRLTSILV  324 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~~~i~~~~~  324 (444)
                      ....+++ ..+.++++-...+.|..++..+++.+..+.. ......+++
T Consensus       247 ~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  294 (349)
T 3v64_C          247 HPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT  294 (349)
T ss_dssp             SEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             CceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence            5567777 3455555656678888888777766655542 223344444

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.71  E-value=3.3e-05  Score=70.87  Aligned_cols=252  Identities=9%  Similarity=-0.040  Sum_probs=144.5

Q ss_pred             EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCcccccc
Q psy8152          46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNF  124 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~  124 (444)
                      +|.+.. + ..+|+.+.. ..|+.+++........+.. .....-.++.+.+.. +++-...+.|+.+++..........
T Consensus        80 ~C~~~~-~-~~~l~~~~~-~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~  155 (386)
T 3v65_B           80 SCKALG-P-EPVLLFANR-IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS  155 (386)
T ss_dssp             CEEECS-S-CCEEEEECB-SCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred             eECCcc-c-cceeEeecC-ccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence            444444 3 344544444 5788888876554443321 112222444554454 4444567889999987665432222


Q ss_pred             ccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       125 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      ........+++.+ .++++++-...+.|.+.++........+.....                  ....|++.|.+..|+
T Consensus       156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~------------------~P~giavdp~~g~ly  217 (386)
T 3v65_B          156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE------------------KPRAIALHPMEGTIY  217 (386)
T ss_dssp             SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCS------------------CEEEEEEETTTTEEE
T ss_pred             CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCC------------------CCcEEEEEcCCCeEE
Confidence            2233456788887 455555556677888888765332222211111                  478899998776555


Q ss_pred             EEe-CC-ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeEeccccCceeE
Q psy8152         204 VCS-KQ-GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD  280 (444)
Q Consensus       204 ~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~  280 (444)
                      .+. .. +.|..+++.   ...........-.....|+|+|++..|+ +-+..+.|..+++.. ......+.........
T Consensus       218 ~td~~~~~~I~r~~~d---G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~g  293 (386)
T 3v65_B          218 WTDWGNTPRIEASSMD---GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFA  293 (386)
T ss_dssp             EEECSSSCEEEEEETT---SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEE
T ss_pred             EeccCCCCEEEEEeCC---CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceE
Confidence            443 34 688888887   2222221222334468999998655554 455667899999864 3333333333345577


Q ss_pred             EEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-CceeEEEE
Q psy8152         281 IACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-SRLTSILV  324 (444)
Q Consensus       281 ~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-~~i~~~~~  324 (444)
                      |++ ..+.++++....+.|..++..+++.+..+... .....+++
T Consensus       294 iav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          294 ITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             EEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             EEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence            887 34556666667788999987777766665422 33444544

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.68  E-value=1.5e-06  Score=85.90  Aligned_cols=245  Identities=6%  Similarity=-0.049  Sum_probs=134.2

Q ss_pred             EEeeeccCCcEEEEEEcCC-----------eEEEEeCCCCccccceeecc-cccc--EEEEEeCCCeEEEEec-CCcEEE
Q psy8152          47 ALNWGNVEESELLIAYSGQ-----------KIKIYDTDFKNFNTNTDVSF-GEGD--IVGVSRYDECILTAVK-SGDVKL  111 (444)
Q Consensus        47 ~~~~~~~~~~~l~~~~~d~-----------~i~vw~~~~~~~~~~~~~~~-~~~~--v~~~s~~~~~l~~~~~-dg~i~i  111 (444)
                      ++++.+.++..++.|+.+.           .+.+||..+++.......+. +...  ..++..+++++++|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            5566622778888887542           68899998887655433222 1222  2345678999999884 458999


Q ss_pred             EEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEee-CC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152         112 WRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGG-KE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       112 w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      ||..+.+...... .....-.+++..+++++++.|+ .+     ..+.+||..+.+-... .....       .|-    
T Consensus       270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~-------~p~----  337 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKV-------NPM----  337 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCS-------GGG----
T ss_pred             ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccc-------ccc----
Confidence            9988765442111 1122223456667899999998 34     5689999987653321 10000       000    


Q ss_pred             cCccceeEEEEecCCCEEEEEeC---------CceEEEEEcCCCCCccceEEEeCC---------CCCeeEEEEcc-CCC
Q psy8152         185 RRPVWVNGISFLPNSDKVAVCSK---------QGYVRVYDPKITTQRRPVLKVDIP---------DVALSCITTTN-QSH  245 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~---------~~~i~~~~~~~-~~~  245 (444)
                      ..  .-....+..++..++.++.         ...+..||..   ...-.......         ...-.++.|.. +++
T Consensus       338 ~~--~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~---~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~  412 (656)
T 1k3i_A          338 LT--ADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS---GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK  412 (656)
T ss_dssp             CC--CCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS---TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE
T ss_pred             cc--ccccceeecCCceEEEECCCCcEEEecCccceeeeecC---CcceeecCCccccccccCCCCCCCceEeccCCCCe
Confidence            00  0000011123333344433         3467888887   22211111111         11223444433 677


Q ss_pred             EEEEEcCCC-----------cEEEEEcCCCCcceeEe--ccccCc-eeEEEecCCCCEEEEEECC-----------CcEE
Q psy8152         246 YVIVGSTTG-----------DMMAVDLRGKGKPCYKY--KGFAGC-VKDIACPLNENLILSVSLD-----------RHFR  300 (444)
Q Consensus       246 ~l~~~~~dg-----------~i~iwd~~~~~~~~~~~--~~h~~~-i~~~~~s~~~~~l~s~~~d-----------g~i~  300 (444)
                      +++.|+.++           .|.+||..+ ..-....  ..+... -.+++..|++++++.|+.+           ..+.
T Consensus       413 i~v~GG~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~  491 (656)
T 1k3i_A          413 ILTFGGSPDYQDSDATTNAHIITLGEPGT-SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPE  491 (656)
T ss_dssp             EEEECCBSSSSSSBCCCCEEEEECCSTTS-CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCE
T ss_pred             EEEEeCCCCCCCCCcCCcceEEEcCCCCC-CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceE
Confidence            888887543           577888776 4433222  112222 2344566899999998864           4689


Q ss_pred             EEEcCCCce
Q psy8152         301 VHDFHSKKL  309 (444)
Q Consensus       301 vw~~~~~~~  309 (444)
                      +||..+.+-
T Consensus       492 ~ydp~t~~W  500 (656)
T 1k3i_A          492 IYVPEQDTF  500 (656)
T ss_dssp             EEEGGGTEE
T ss_pred             EEcCCCCce
Confidence            999877654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.65  E-value=2.4e-05  Score=72.85  Aligned_cols=241  Identities=9%  Similarity=0.012  Sum_probs=138.2

Q ss_pred             cceEEEeeeccC--CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC---C-cEEEEEcCC
Q psy8152          43 ASVLALNWGNVE--ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS---G-DVKLWRYKT  116 (444)
Q Consensus        43 ~~v~~~~~~~~~--~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d---g-~i~iw~~~~  116 (444)
                      .....|+|. ++  ...|+.+...+.|+.++..++....... ......-++++++++++++....   . .+...+...
T Consensus       139 ~~P~gvavd-~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~  216 (433)
T 4hw6_A          139 DNIWRMMFD-PNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS  216 (433)
T ss_dssp             SCCCEEEEC-TTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred             CCCceEEEc-cccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence            356789999 53  4556655544899999987777655432 22233445667888844443321   1 133333222


Q ss_pred             CCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         117 EPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       117 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      +...............++++| ++.++++-...+.|+.++..++.....+.....                ..+...|+|
T Consensus       217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~----------------~~~~~~ia~  280 (433)
T 4hw6_A          217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT----------------KGSNFHIVW  280 (433)
T ss_dssp             TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC----------------CSSCEEEEE
T ss_pred             CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC----------------CCCcccEEE
Confidence            211101122334456789999 676666666778899999886655222211111                012457999


Q ss_pred             ecCCCE-EEEEeCCceEEEEEcCCCCCc--cceEEEeCC---------------CCCeeEEEE---------ccCCCEEE
Q psy8152         196 LPNSDK-VAVCSKQGYVRVYDPKITTQR--RPVLKVDIP---------------DVALSCITT---------TNQSHYVI  248 (444)
Q Consensus       196 ~~~~~~-l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~---------------~~~i~~~~~---------~~~~~~l~  248 (444)
                      +|++++ +++-...+.|+.++.. ....  .....+.+.               -.....+++         .+++.+++
T Consensus       281 dpdG~~LYvad~~~~~I~~~~~d-~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyv  359 (433)
T 4hw6_A          281 HPTGDWAYIIYNGKHCIYRVDYN-RETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYF  359 (433)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEBC-TTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEE
T ss_pred             eCCCCEEEEEeCCCCEEEEEeCC-CCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEE
Confidence            999984 4555667899998876 1111  111122111               123466888         67787777


Q ss_pred             EEcCCCcEEEEEcCCCCcceeEeccc------------------cCceeEEEec-CCCCEEEEEECCCcEEEEEcC
Q psy8152         249 VGSTTGDMMAVDLRGKGKPCYKYKGF------------------AGCVKDIACP-LNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       249 ~~~~dg~i~iwd~~~~~~~~~~~~~h------------------~~~i~~~~~s-~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      +-...+.|+.++. . +. +.++.+.                  -.....|+++ +++.++++-...+.|+.+++.
T Consensus       360 aD~~n~~I~~~~~-~-G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          360 CDRDSHTVRVLTP-E-GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             EETTTTEEEEECT-T-SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EECCCCEEEEECC-C-CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            7777888999884 3 53 3333221                  1235678888 555555555556677776653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.64  E-value=0.00016  Score=64.33  Aligned_cols=231  Identities=9%  Similarity=-0.055  Sum_probs=134.5

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCC---Ccccccc-ccCCCeE
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTE---PDQWTNF-NVGPQLE  131 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~---~~~~~~~-~~~~~v~  131 (444)
                      +|+.+.. ..|+..++.+......+.. .....-..+.+.++.| ++-...+.|+.+++...   .....+. .......
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~   80 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD   80 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence            3444444 5688889887665544321 1122223445555544 44455688999998751   2221122 2223467


Q ss_pred             EEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-C-
Q psy8152         132 CMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-Q-  208 (444)
Q Consensus       132 ~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-  208 (444)
                      .+++.+ .++++++-...+.|.++++........+.....                  ....+++.|.+..|+.+.. . 
T Consensus        81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~------------------~P~~iavdp~~g~ly~~d~~~~  142 (316)
T 1ijq_A           81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDWGTP  142 (316)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC------------------CEEEEEEETTTTEEEEEECSSS
T ss_pred             EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC------------------CcceEEeCCCCCEEEEEccCCC
Confidence            899987 445555556678999999875432222221111                  4789999997765555443 2 


Q ss_pred             ceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEec---cccCceeEEEe
Q psy8152         209 GYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDIAC  283 (444)
Q Consensus       209 ~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~  283 (444)
                      +.|..+++.    +.....+ ...-.....|+++|++..|+. -...+.|..+++..  .....+.   ........+++
T Consensus       143 ~~I~~~~~d----G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg--~~~~~~~~~~~~~~~P~giav  216 (316)
T 1ijq_A          143 AKIKKGGLN----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAV  216 (316)
T ss_dssp             CEEEEEETT----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEECTTTTSSEEEEEE
T ss_pred             CeEEEEcCC----CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC--CceEEEeecCCccCCcEEEEE
Confidence            688888887    2222222 223345689999987655554 55667899999864  3333332   12234567777


Q ss_pred             cCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         284 PLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       284 s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      . .+.++++-...+.|..++..+++.+..+.
T Consensus       217 ~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          217 F-EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             E-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             E-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence            5 35556666667889999987777666554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.62  E-value=0.00023  Score=63.23  Aligned_cols=231  Identities=12%  Similarity=0.042  Sum_probs=135.7

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc-ccccEEEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF-GEGDIVGV   93 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~   93 (444)
                      ...|+.+++.......  ...+   .....+.++.|.+.++..+++-...+.|+.+++..+.....+...+ ....-.++
T Consensus        12 ~~~I~~i~l~~~~~~~--~~~~---~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glav   86 (318)
T 3sov_A           12 RRDLRLVDATNGKENA--TIVV---GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC   86 (318)
T ss_dssp             EEEEEEEETTCTTSCC--EEEE---EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEE
T ss_pred             cCeEEEEECCCCceEE--EEEe---cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEE
Confidence            5678999987664110  1111   1234567899994334444455566889999987654322211111 12333566


Q ss_pred             EeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeecccc
Q psy8152          94 SRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKNVSH  170 (444)
Q Consensus        94 s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~  170 (444)
                      .+.+. ++++-...+.|.++++..................+++.|.+..|+.+.  ..+.|...++............-.
T Consensus        87 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~  166 (318)
T 3sov_A           87 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY  166 (318)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred             EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC
Confidence            66444 455555678899999875443322223445678999999555555544  357788888764222111111111


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                                        +.+.|+++|++..|. +-+..+.|..+++. ....+.+  +.........+++. .+.++++
T Consensus       167 ------------------~Pnglavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~--~~~~~~~P~glav~-~~~lywt  224 (318)
T 3sov_A          167 ------------------WPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAV--VKGSLPHPFALTLF-EDILYWT  224 (318)
T ss_dssp             ------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEE--ECSCCSCEEEEEEE-TTEEEEE
T ss_pred             ------------------CccEEEEeccCCEEEEEECCCCEEEEEcCC-CCceEEE--ecCCCCCceEEEEe-CCEEEEE
Confidence                              478999999765555 44567899999988 2222222  22233445677775 3456666


Q ss_pred             EcCCCcEEEEEcCCCCcceeEecc
Q psy8152         250 GSTTGDMMAVDLRGKGKPCYKYKG  273 (444)
Q Consensus       250 ~~~dg~i~iwd~~~~~~~~~~~~~  273 (444)
                      -...+.|..++..+ ++.+..+..
T Consensus       225 d~~~~~V~~~~~~~-G~~~~~i~~  247 (318)
T 3sov_A          225 DWSTHSILACNKYT-GEGLREIHS  247 (318)
T ss_dssp             ETTTTEEEEEETTT-CCSCEEEEC
T ss_pred             ecCCCeEEEEECCC-CCceEEEeC
Confidence            67778899999877 776666653

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.60  E-value=0.00018  Score=63.87  Aligned_cols=232  Identities=10%  Similarity=-0.031  Sum_probs=135.7

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeC-CCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEE
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRY-DECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLEC  132 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~  132 (444)
                      +|+.+.. ..|+.+++........+...+ .....+  +.+. +.++++-...+.|+.+++........ ....-.....
T Consensus         6 ~ll~~~~-~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g   83 (318)
T 3sov_A            6 LLLYANR-RDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG   83 (318)
T ss_dssp             EEEEECE-EEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred             EEEEEcc-CeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence            4444433 678899987654222222111 223334  4443 44455555678899999876642211 2222345678


Q ss_pred             EEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--CCc
Q psy8152         133 MKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--KQG  209 (444)
Q Consensus       133 ~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~  209 (444)
                      +++.+ .++++++-...+.|.++++........+.....                  ....+++.|.+..|+.+.  ..+
T Consensus        84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~------------------~P~giavdp~~g~ly~td~~~~~  145 (318)
T 3sov_A           84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD------------------QPRAIALDPSSGFMYWTDWGEVP  145 (318)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS------------------SEEEEEEEGGGTEEEEEECSSSC
T ss_pred             EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC------------------CccEEEEeCCCCEEEEEecCCCC
Confidence            89987 555556656678899999875332221111111                  478999998766665554  357


Q ss_pred             eEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152         210 YVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       210 ~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      .|..+++.  +  .....+ ...-.....|+++|++..|+ +-+..+.|..+++.. ......+.+.......+++. .+
T Consensus       146 ~I~r~~~d--G--~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~-~~  219 (318)
T 3sov_A          146 KIERAGMD--G--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLF-ED  219 (318)
T ss_dssp             EEEEEETT--S--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEE-TT
T ss_pred             EEEEEEcC--C--CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEe-CC
Confidence            88888887  1  122222 22234468999999655554 455677899999864 32222222233455677775 33


Q ss_pred             CEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         288 NLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       288 ~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .++++-...+.|..++..+++.+..+.
T Consensus       220 ~lywtd~~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          220 ILYWTDWSTHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             EEEEEecCCCeEEEEECCCCCceEEEe
Confidence            455565667889999998887666554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.58  E-value=4e-05  Score=76.88  Aligned_cols=240  Identities=10%  Similarity=0.002  Sum_probs=128.7

Q ss_pred             ceEEEeeeccCCcEEEEEEc-CC----eEEEEeCCCC-ccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEE
Q psy8152          44 SVLALNWGNVEESELLIAYS-GQ----KIKIYDTDFK-NFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLW  112 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~-d~----~i~vw~~~~~-~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw  112 (444)
                      .+...+||||++++||.+.. .|    .|+++++.++ +.+.. .... ...-..++|+++.|+....+     ..|+++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~  252 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRH  252 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence            67889999448888875443 22    5999999988 63321 1111 12234578999887777664     357888


Q ss_pred             EcCCCCcccc-cc--ccCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCce-ee--eeee-cccceeeEeeeCCCcc
Q psy8152         113 RYKTEPDQWT-NF--NVGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTK-NI--FSAK-NVSHRVLVYSVKPDEF  182 (444)
Q Consensus       113 ~~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~-~~--~~~~-~~~~~~~~~~~~~~~~  182 (444)
                      ++.+++.... +.  ........+.|+|++++|+..+.   ...|.++|+.++. ..  ..+. ....            
T Consensus       253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~------------  320 (751)
T 2xe4_A          253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG------------  320 (751)
T ss_dssp             ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT------------
T ss_pred             ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC------------
Confidence            8877643211 21  22344678899999998887653   3468888887642 11  2221 1111            


Q ss_pred             cccCccceeEEEEecCCCEEEEEeCC----ceEEEEEcCCCCCccceEE-EeCCCC--CeeEEEEccCCCEEEEEcCCCc
Q psy8152         183 DLRRPVWVNGISFLPNSDKVAVCSKQ----GYVRVYDPKITTQRRPVLK-VDIPDV--ALSCITTTNQSHYVIVGSTTGD  255 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~l~~~~~dg~  255 (444)
                            ...++.|+..+.+++....+    ..|..+++.   ....... +..+..  .+..+.+. .+.++++...++.
T Consensus       321 ------~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~---~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~  390 (751)
T 2xe4_A          321 ------VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG---QPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGL  390 (751)
T ss_dssp             ------CCEEEEEETTTEEEEEECTTTCTTCEEEEEETT---STTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTE
T ss_pred             ------ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC---CcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCE
Confidence                  34555555433444444433    366667765   2111122 223333  34455554 2344555666675


Q ss_pred             --EEEEEc-------CCCCcceeEecc-ccCceeEEEe----cCCCC-EEEEEECC---CcEEEEEcCCCc
Q psy8152         256 --MMAVDL-------RGKGKPCYKYKG-FAGCVKDIAC----PLNEN-LILSVSLD---RHFRVHDFHSKK  308 (444)
Q Consensus       256 --i~iwd~-------~~~~~~~~~~~~-h~~~i~~~~~----s~~~~-~l~s~~~d---g~i~vw~~~~~~  308 (444)
                        |+++++       .. ++.+..+.- ....+..+.+    ++++. ++++.+..   ..++.+++.+++
T Consensus       391 ~~l~~~dl~~~~~~~~~-g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~  460 (751)
T 2xe4_A          391 TRIWTMMADSQDGVFKA-GTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS  460 (751)
T ss_dssp             EEEEEEECCTTTSCCCT-TTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred             EEEEEEecccccccccC-CccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence              555665       33 331444431 1122334433    34554 44444433   357777777654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.54  E-value=6e-05  Score=64.05  Aligned_cols=203  Identities=9%  Similarity=0.126  Sum_probs=123.3

Q ss_pred             CcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCC
Q psy8152          40 TNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKT  116 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~  116 (444)
                      +-...+..++|+ |+++.|+ +...++.|...|.. ++.+..+...+. ...-  ++.+++.++++.-.++.+.++++..
T Consensus        24 g~~~~lSGla~~-~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~  100 (255)
T 3qqz_A           24 GITNNISSLTWS-AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTP  100 (255)
T ss_dssp             TCCSCEEEEEEE-TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred             CcccCcceeEEe-CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence            445679999999 5555554 56778899999988 888877754331 2233  3345666666655677888888765


Q ss_pred             CCccc---cc------cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---ceeeeeeecccceeeEeeeCCCcccc
Q psy8152         117 EPDQW---TN------FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---TKNIFSAKNVSHRVLVYSVKPDEFDL  184 (444)
Q Consensus       117 ~~~~~---~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (444)
                      ...+.   ..      .......-.++|.|.++.|+++.......+|.+..   ...+..+....       +. ...  
T Consensus       101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~-------~~-~~~--  170 (255)
T 3qqz_A          101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA-------LQ-RQF--  170 (255)
T ss_dssp             TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH-------HH-HTC--
T ss_pred             CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh-------hc-ccc--
Confidence            44211   01      12344568999999887777777665556666541   11111110000       00 000  


Q ss_pred             cCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---------CCeeEEEEccCCCEEEEEcCCC
Q psy8152         185 RRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---------VALSCITTTNQSHYVIVGSTTG  254 (444)
Q Consensus       185 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg  254 (444)
                       ....+.+++++|.. .+++.....+.|.++|..    ++++..+.-..         .....|+|.++|++.++ +.-+
T Consensus       171 -~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~----g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n  244 (255)
T 3qqz_A          171 -TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV----GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN  244 (255)
T ss_dssp             -CSSCCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred             -ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC----CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence             01136889999976 556666778889999987    33333333221         24578999999985554 6667


Q ss_pred             cEEEEEc
Q psy8152         255 DMMAVDL  261 (444)
Q Consensus       255 ~i~iwd~  261 (444)
                      .+++|..
T Consensus       245 ~~y~f~~  251 (255)
T 3qqz_A          245 RFYRFTP  251 (255)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEEe
Confidence            6776653

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.53  E-value=6.3e-05  Score=70.26  Aligned_cols=246  Identities=11%  Similarity=0.072  Sum_probs=136.7

Q ss_pred             ceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceeecc-c--cccEEEE-------EeCCCeEEEEecCC-----
Q psy8152          44 SVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDVSF-G--EGDIVGV-------SRYDECILTAVKSG-----  107 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~-~--~~~v~~~-------s~~~~~l~~~~~dg-----  107 (444)
                      ....|+|.|.+...|+.+.. .+.|++.|+.++.+........ .  ....+++       ++++++|+++...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            35688999313555555544 4678899988777665543211 1  2334566       77888666665554     


Q ss_pred             --cEEEEEcCC-CCccc----cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcC-------Ccee-----------
Q psy8152         108 --DVKLWRYKT-EPDQW----TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLN-------TTKN-----------  161 (444)
Q Consensus       108 --~i~iw~~~~-~~~~~----~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~-------~~~~-----------  161 (444)
                        .|.+++... +....    ....-......++++| ++.++++-...+.|..+|+.       ++..           
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~  299 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT  299 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred             CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence              255665333 22210    0111122345788899 56666666678889999987       4432           


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE-EEEEeCCceEEEEEcCCCCCccc--eEEEeCC---C---
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYDPKITTQRRP--VLKVDIP---D---  232 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~---~---  232 (444)
                      ...+.....                ..+.+.|+|+|++++ +++-+..+.|+.++.. ......  ...+.+.   .   
T Consensus       300 ~~~l~~~~~----------------~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d-g~~~~~~~~~~~aG~~g~~G~~  362 (496)
T 3kya_A          300 FKQLFTIAD----------------PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD-EIKKEFITPYNFVGGYKQSGYR  362 (496)
T ss_dssp             EEEEEECSS----------------SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEEBTTBCCCB
T ss_pred             cceeEecCC----------------CCCceEEEEcCCCCEEEEEeCCCCEEEEEecC-CCcceecccEEecCCCCCCccc
Confidence            111100000                125789999999985 4555677899997765 111111  1122111   0   


Q ss_pred             ---------CCee-EEEEc-------cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc---------------------
Q psy8152         233 ---------VALS-CITTT-------NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF---------------------  274 (444)
Q Consensus       233 ---------~~i~-~~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h---------------------  274 (444)
                               .... .++..       +.+.++++-.....|+.++ .. + .+.++.+.                     
T Consensus       363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~-G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~  439 (496)
T 3kya_A          363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PE-G-IVSTYAGRGASTSLADGNQWGTDDGDLRE  439 (496)
T ss_dssp             CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TT-C-BEEEEEESCTTHHHHHSCSCCCCCEETTT
T ss_pred             CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CC-C-CEEEEecccccccccCccccccCCCCchh
Confidence                     1123 44454       4567777777788899988 34 5 34444322                     


Q ss_pred             ---cCceeEEEecCC-CCEEEEEECCCcEEEEEcCCCce
Q psy8152         275 ---AGCVKDIACPLN-ENLILSVSLDRHFRVHDFHSKKL  309 (444)
Q Consensus       275 ---~~~i~~~~~s~~-~~~l~s~~~dg~i~vw~~~~~~~  309 (444)
                         -.....|++.++ +.++++=.....|+.+++.....
T Consensus       440 ~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~  478 (496)
T 3kya_A          440 VARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN  478 (496)
T ss_dssp             TCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred             hhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence               012456777775 55555545566677776655433

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.49  E-value=0.00074  Score=62.11  Aligned_cols=241  Identities=9%  Similarity=-0.056  Sum_probs=142.7

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEE-ecCCcEEEEEcCCCC----ccccccccCC
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTA-VKSGDVKLWRYKTEP----DQWTNFNVGP  128 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~-~~dg~i~iw~~~~~~----~~~~~~~~~~  128 (444)
                      .+|+.+.. ..|+..++........+.   ....+  +++.+.+..|+.+ ...+.|+.+++....    ..........
T Consensus        84 ~~ll~~~~-~~I~~i~l~~~~~~~~~~---~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~  159 (400)
T 3p5b_L           84 AYLFFTNR-HEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ  159 (400)
T ss_dssp             CEEEEEET-TEEEEECTTSCSCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred             ceeEEecc-ceeEEEccCCcceeEecc---ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence            35555544 789999987665544432   22334  4445545555444 456788888886522    2211222345


Q ss_pred             CeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC
Q psy8152         129 QLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK  207 (444)
Q Consensus       129 ~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  207 (444)
                      ....+++.+ .++++++-...+.|.+.++........+.....                  ....|++.|.+.+|+....
T Consensus       160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~------------------~P~~iavdp~~g~ly~td~  221 (400)
T 3p5b_L          160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDW  221 (400)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC------------------CEEEEEEETTTTEEEEEEC
T ss_pred             CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC------------------CcceEEEecccCeEEEEeC
Confidence            678899988 555666666678899999876443332221112                  3789999997666655442


Q ss_pred             --CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEe-cc--ccCceeEE
Q psy8152         208 --QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKY-KG--FAGCVKDI  281 (444)
Q Consensus       208 --d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~-~~--h~~~i~~~  281 (444)
                        .+.|...++.   .......+...-.....|+++|.+..|+.+ ...+.|..+++.. . ....+ ..  ......+|
T Consensus       222 ~~~~~I~~~~~d---G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~l~~P~gl  296 (400)
T 3p5b_L          222 GTPAKIKKGGLN---GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSL  296 (400)
T ss_dssp             SSSCCEEEEETT---SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-C-CCEEEEECSSTTSSEEEE
T ss_pred             CCCCEEEEEeCC---CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC-C-ccEEEEeCCCCCCCCEEE
Confidence              4788888887   222222122333457899999876666554 5567899999864 3 33333 21  22344567


Q ss_pred             EecCCCCEEEEEECCCcEEEEEcCCCceEEEeec-CCceeEEEE
Q psy8152         282 ACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM-QSRLTSILV  324 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~~~i~~~~~  324 (444)
                      ++. .+.++++-...+.|..++..+++.+..+.. ......+++
T Consensus       297 ~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v  339 (400)
T 3p5b_L          297 AVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL  339 (400)
T ss_dssp             EEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred             EEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence            763 345556666778899999888877666652 233455544

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.48  E-value=0.00028  Score=70.49  Aligned_cols=229  Identities=14%  Similarity=0.085  Sum_probs=129.6

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCc----cccceeecccccc
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKN----FNTNTDVSFGEGD   89 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~   89 (444)
                      ...|+..++.....     ..+.  .....+.+|+|. +....|+ +-...+.|+.+++....    ....+........
T Consensus       403 ~~~Ir~i~l~~~~~-----~~l~--~~~~~~~gl~~d-~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~  474 (791)
T 3m0c_C          403 RHEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD  474 (791)
T ss_dssp             BSSEEEECTTSCCC-----EEEE--CSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             ccceeEeeccCCcc-----eeee--cCCCceEEEeec-ccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence            34566666655442     1111  234567899999 5444444 54556889988887532    2222211112334


Q ss_pred             EEEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-C-CCeEEEEEcCCceeeeeee
Q psy8152          90 IVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-K-ENDLKLWDLNTTKNIFSAK  166 (444)
Q Consensus        90 v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~vwd~~~~~~~~~~~  166 (444)
                      -+++.+.++. +++-...+.|.+.++..................|++.|....|+.+. . .+.|...++........+.
T Consensus       475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~  554 (791)
T 3m0c_C          475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT  554 (791)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred             eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe
Confidence            4666776654 44555678899999875544322223445688999999655555443 2 3678888886543322222


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH  245 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  245 (444)
                      ....                  +.+.|++.+.+..|+.+ ...+.|..+++. ......+..-...-.....|++.. ++
T Consensus       555 ~~l~------------------~P~GLavD~~~~~LYwaD~~~~~I~~~d~d-G~~~~~v~~~~~~l~~P~glav~~-~~  614 (791)
T 3m0c_C          555 ENIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFE-DK  614 (791)
T ss_dssp             SSCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEET-TE
T ss_pred             CCCC------------------CceEEEEecCCCeEEEEeCCCCcEEEEecC-CCceEEEecCCCccCCCCEEEEeC-CE
Confidence            1112                  58899999777666555 556789999988 222222221111122344666643 34


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      ++++-...+.|...+..+ ++.+..+.
T Consensus       615 lYwtD~~~~~I~~~dk~t-G~~~~~l~  640 (791)
T 3m0c_C          615 VFWTDIINEAIFSANRLT-GSDVNLLA  640 (791)
T ss_dssp             EEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred             EEEEECCCCEEEEEeCCC-CcceEEee
Confidence            555566678888888777 76665554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.47  E-value=2.4e-05  Score=78.47  Aligned_cols=193  Identities=9%  Similarity=0.035  Sum_probs=109.2

Q ss_pred             EEEEE-eCCCeEEEEec-CC----cEEEEEcCCC-CccccccccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcC
Q psy8152          90 IVGVS-RYDECILTAVK-SG----DVKLWRYKTE-PDQWTNFNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLN  157 (444)
Q Consensus        90 v~~~s-~~~~~l~~~~~-dg----~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~  157 (444)
                      ...+| |+|++|+.+.. .|    +|+++++.++ +.+....  ......++|+|+++.|+....+     ..|.++++.
T Consensus       178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg  255 (751)
T 2xe4_A          178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG  255 (751)
T ss_dssp             EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred             eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence            35679 99998776543 33    4999999988 6432111  1123578999999888877665     257778877


Q ss_pred             Ccee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCccc-eEEEe-C
Q psy8152         158 TTKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQRRP-VLKVD-I  230 (444)
Q Consensus       158 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~-~~~~~-~  230 (444)
                      +++.  ...+.....                 .....+.|+|++++|+..+   ....|+++|+. +..... +..+. .
T Consensus       256 t~~~~~~lv~~~~~~-----------------~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~-~~~~~~~~~~l~~~  317 (751)
T 2xe4_A          256 KLQSEDVCLYEEHNP-----------------LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR-KGNAHNTLEIVRPR  317 (751)
T ss_dssp             SCGGGCEEEEECCCT-----------------TCEEEEEECTTSSEEEEEEECSSCEEEEEEESS-SCTTCCCEEESSCC
T ss_pred             CCchhcEEEEecCCC-----------------ceEEEEEECCCCCEEEEEecCCCCceEEEEECC-CCCCCceeEEeecC
Confidence            6531  111111111                 1356789999998887654   34578888987 221122 12232 2


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCC----CcEEEEEcCCCCcceeE-eccccC--ceeEEEecCCCCEEEEEECCCc--EEE
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTT----GDMMAVDLRGKGKPCYK-YKGFAG--CVKDIACPLNENLILSVSLDRH--FRV  301 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~~~h~~--~i~~~~~s~~~~~l~s~~~dg~--i~v  301 (444)
                      ......++.|+..+.+++....+    ..|..+++.+ ...... +..|..  .+..+.+. .+.++++...++.  |++
T Consensus       318 ~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~-~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~  395 (751)
T 2xe4_A          318 EKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ-PSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT  395 (751)
T ss_dssp             CTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS-TTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred             CCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC-cccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence            33444555555444444444443    3566677654 222223 333333  34555554 3345666677776  455


Q ss_pred             EEc
Q psy8152         302 HDF  304 (444)
Q Consensus       302 w~~  304 (444)
                      +++
T Consensus       396 ~dl  398 (751)
T 2xe4_A          396 MMA  398 (751)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            564

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.47  E-value=0.00048  Score=71.85  Aligned_cols=309  Identities=11%  Similarity=0.035  Sum_probs=167.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-----CCcEEEEEEc-CCeEEEEeCCCCcccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-----EESELLIAYS-GQKIKIYDTDFKNFNT   79 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~-d~~i~vw~~~~~~~~~   79 (444)
                      +.++++++ .+.|.++.+..++.  .....   ..-...|.|+++.|.     ...++++|.. |++|+|+.+.+.+.+.
T Consensus       523 ~~~vvva~-g~~l~~fel~~~~L--~~~~~---~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~  596 (1158)
T 3ei3_A          523 SSQVVVAV-GRALYYLQIHPQEL--RQISH---TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLH  596 (1158)
T ss_dssp             SSEEEEEE-TTEEEEEEEETTEE--EEEEE---EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             CCEEEEEE-CCEEEEEEeeCCce--eeecc---cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEE
Confidence            44566664 56777777765542  22222   223568999999842     2478999997 9999999998766554


Q ss_pred             ceeeccccccEE--EE-EeC-CCeEEEEecCCcEEEEEcC--CCCccc---cccccCCCeEEEEEeccCCEEEEeeCCCe
Q psy8152          80 NTDVSFGEGDIV--GV-SRY-DECILTAVKSGDVKLWRYK--TEPDQW---TNFNVGPQLECMKHNKHSNIIATGGKEND  150 (444)
Q Consensus        80 ~~~~~~~~~~v~--~~-s~~-~~~l~~~~~dg~i~iw~~~--~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  150 (444)
                      ...+.. .....  .+ ... ..+|..|-.||.+.-+.+.  ++....   ...+ ..++.-..+...+..-+.+..+..
T Consensus       597 ~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp  674 (1158)
T 3ei3_A          597 KEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRP  674 (1158)
T ss_dssp             EEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSC
T ss_pred             EEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCC
Confidence            433322 11222  22 222 3468888899998766654  343322   1222 334444444333332222222344


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE-EEecCC--CEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI-SFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~  227 (444)
                      ..+|.-+ ++....  ....                 ..+.++ .|+...  .-++..+ ++.++|..+. ......+.+
T Consensus       675 ~liy~~~-~~l~~s--~l~~-----------------~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~-~~~~~~~~~  732 (1158)
T 3ei3_A          675 TVIYSSN-HKLVFS--NVNL-----------------KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTID-EIQKLHIRT  732 (1158)
T ss_dssp             EEEEESS-SSEEEE--EBSS-----------------SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEEC-CSSSEEEEE
T ss_pred             EEEEEcC-CceEEe--ccCh-----------------HHhceEeccCcccCCCcEEEEc-CCceEEEEec-ccCCeeEEE
Confidence            4444433 222211  1111                 013223 343322  3444433 4569998886 223344555


Q ss_pred             EeCCCCCeeEEEEccCCCEEEEEcCC-------------------------------------------------CcEEE
Q psy8152         228 VDIPDVALSCITTTNQSHYVIVGSTT-------------------------------------------------GDMMA  258 (444)
Q Consensus       228 ~~~~~~~i~~~~~~~~~~~l~~~~~d-------------------------------------------------g~i~i  258 (444)
                      ++-. ..+..++++|..+.++.+..+                                                 +.|++
T Consensus       733 ipL~-~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~l  811 (1158)
T 3ei3_A          733 VPLY-ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLI  811 (1158)
T ss_dssp             EECS-SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEE
T ss_pred             EeCC-CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEE
Confidence            5543 467889998876655443211                                                 24677


Q ss_pred             EEcCCCCcceeEecc-ccCceeEE---EecCC-CCEEEEEE----------CCCcEEEEEcCCCce--EEEeecCCceeE
Q psy8152         259 VDLRGKGKPCYKYKG-FAGCVKDI---ACPLN-ENLILSVS----------LDRHFRVHDFHSKKL--LRKDYMQSRLTS  321 (444)
Q Consensus       259 wd~~~~~~~~~~~~~-h~~~i~~~---~~s~~-~~~l~s~~----------~dg~i~vw~~~~~~~--~~~~~~~~~i~~  321 (444)
                      +|..+ .+.+..+.- ....+.++   .|..+ ..+|+.|+          ..|.|++|++..+++  +.+...++.+.+
T Consensus       812 idp~t-~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~a  890 (1158)
T 3ei3_A          812 IDQHT-FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYS  890 (1158)
T ss_dssp             EETTT-CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEE
T ss_pred             EeCCC-CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEE
Confidence            77777 666655542 22234444   34332 36888886          358899999975443  333446788888


Q ss_pred             EEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152         322 ILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~  358 (444)
                      ++--.          ++++++  ....+++|++...+
T Consensus       891 l~~~~----------g~Lla~--ig~~l~vy~l~~~~  915 (1158)
T 3ei3_A          891 MVEFN----------GKLLAS--INSTVRLYEWTTEK  915 (1158)
T ss_dssp             EEEET----------TEEEEE--ETTEEEEEEECTTS
T ss_pred             EeeeC----------CEEEEE--cCCEEEEEECCCCc
Confidence            76321          233443  45778999887544

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.45  E-value=6.2e-05  Score=70.04  Aligned_cols=150  Identities=11%  Similarity=0.036  Sum_probs=93.4

Q ss_pred             EEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CC----eEEEEEcCCceee-
Q psy8152          90 IVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-EN----DLKLWDLNTTKNI-  162 (444)
Q Consensus        90 v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~vwd~~~~~~~-  162 (444)
                      -++++| ++..|+++...+.|+.+++..+... .+.........++|++++++|+++.. .+    .+.+++. .+... 
T Consensus       141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~  218 (430)
T 3tc9_A          141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKV  218 (430)
T ss_dssp             EEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCS
T ss_pred             EEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceee
Confidence            456676 3555665555578999998876544 24445566889999999996665554 22    2333333 22211 


Q ss_pred             -eeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEE
Q psy8152         163 -FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCIT  239 (444)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~  239 (444)
                       ..+....                   ....++++| ++.++++-...+.|..|+..   ......... ........|+
T Consensus       219 ~~~l~~~~-------------------~p~giavdp~~g~lyv~d~~~~~V~~~~~~---~~~~~~~~~~~~~~~P~gia  276 (430)
T 3tc9_A          219 ITELTKGQ-------------------NCNGAETHPINGELYFNSWNAGQVFRYDFT---TQETTPLFTIQDSGWEFHIQ  276 (430)
T ss_dssp             EEEEEECS-------------------SCCCEEECTTTCCEEEEETTTTEEEEEETT---TTEEEEEEECSSSSCCEEEE
T ss_pred             eeeeccCC-------------------CceEEEEeCCCCEEEEEECCCCEEEEEECC---CCcEEEEEEcCCCCcceeEE
Confidence             1121111                   367789999 67777777778899999987   332211112 1223467899


Q ss_pred             EccCCCEE-EEEcCCCcEEEEEcCC
Q psy8152         240 TTNQSHYV-IVGSTTGDMMAVDLRG  263 (444)
Q Consensus       240 ~~~~~~~l-~~~~~dg~i~iwd~~~  263 (444)
                      |+|++++| ++-...+.|+.++...
T Consensus       277 ~~pdG~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          277 FHPSGNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             EcCCCCEEEEEECCCCEEEEEeCCc
Confidence            99999954 4556678899988653

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.45  E-value=0.0004  Score=58.94  Aligned_cols=203  Identities=10%  Similarity=0.077  Sum_probs=122.3

Q ss_pred             cEEEE--EeCCCe-EEEEecCCcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          89 DIVGV--SRYDEC-ILTAVKSGDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        89 ~v~~~--s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .+..+  .|+++. +++...++.|...|+. ++.+..+ ..-....-.+++.+++.++++.-.++.+.++++.....+..
T Consensus        28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~  106 (255)
T 3qqz_A           28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI  106 (255)
T ss_dssp             CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred             CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence            44444  565554 5556778889999987 6655433 22235678889988887766655678899998876432211


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-------CCCCCeeE
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-------IPDVALSC  237 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~i~~  237 (444)
                      .....-     .+    .....+.....|+|.|.++.|.++.......+|.+..-.....+..+.       .+...+.+
T Consensus       107 ~~~~~~-----~~----~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~  177 (255)
T 3qqz_A          107 LKKIKI-----PL----QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG  177 (255)
T ss_dssp             EEEEEC-----CC----SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred             eeeecc-----cc----ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence            111100     00    001123347899999999777776665555555554100111122121       12345789


Q ss_pred             EEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEecccc---------CceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         238 ITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA---------GCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       238 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~---------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      ++++|. +++++.......|.++|..  ++++..+.-..         ...-.|+|.++|++.++ +.-..+++|.-
T Consensus       178 l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~  251 (255)
T 3qqz_A          178 AEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP  251 (255)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred             EEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence            999996 5566667778889999976  55665554211         24578999999984444 77776666654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.45  E-value=0.00019  Score=63.47  Aligned_cols=215  Identities=8%  Similarity=0.050  Sum_probs=119.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC--eEEEEeCCCCccccceee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ--KIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~   83 (444)
                      +..+++....+.|..|+.....  .   ..+.   ....+.++++. ++++++++.....  .|..++..+++.......
T Consensus        43 g~lyv~d~~~~~I~~~d~~g~~--~---~~~~---~~~~p~gia~~-~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~  113 (306)
T 2p4o_A           43 GTIFVTNHEVGEIVSITPDGNQ--Q---IHAT---VEGKVSGLAFT-SNGDLVATGWNADSIPVVSLVKSDGTVETLLTL  113 (306)
T ss_dssp             SCEEEEETTTTEEEEECTTCCE--E---EEEE---CSSEEEEEEEC-TTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             CCEEEEeCCCCeEEEECCCCce--E---EEEe---CCCCceeEEEc-CCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence            3444444467788777765432  1   1111   23468899999 6888655543322  466777777765443322


Q ss_pred             ccccccEEEEE-eCCCe-EEEEecCCcEEEEEcCCCCc-cc---------cccccCCCeEEEEEeccCCEEEE-eeCCCe
Q psy8152          84 SFGEGDIVGVS-RYDEC-ILTAVKSGDVKLWRYKTEPD-QW---------TNFNVGPQLECMKHNKHSNIIAT-GGKEND  150 (444)
Q Consensus        84 ~~~~~~v~~~s-~~~~~-l~~~~~dg~i~iw~~~~~~~-~~---------~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~  150 (444)
                      .. ......+. ..+.. +++-...+.|++++..+++. +.         .....-.....+  +|+++.|+. -...+.
T Consensus       114 ~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~  190 (306)
T 2p4o_A          114 PD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKML  190 (306)
T ss_dssp             TT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTE
T ss_pred             CC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCE
Confidence            11 11112221 23334 44444578888888765421 10         001111234555  777765554 455788


Q ss_pred             EEEEEcCC-cee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152         151 LKLWDLNT-TKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       151 i~vwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  227 (444)
                      |..|++.. ++.  ...+... .                  ....+++.++|+++++....+.|.+++..  +....+..
T Consensus       191 I~~~~~~~~g~~~~~~~~~~~-~------------------~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~~~  249 (306)
T 2p4o_A          191 LLRIPVDSTDKPGEPEIFVEQ-T------------------NIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTIIAQ  249 (306)
T ss_dssp             EEEEEBCTTSCBCCCEEEEES-C------------------CCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEEEC
T ss_pred             EEEEEeCCCCCCCccEEEecc-C------------------CCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEEee
Confidence            99999875 321  0111000 0                  25678999999888877778899999876  11111222


Q ss_pred             EeCCCCCeeEEEEc---cCCCEEEEEcCC
Q psy8152         228 VDIPDVALSCITTT---NQSHYVIVGSTT  253 (444)
Q Consensus       228 ~~~~~~~i~~~~~~---~~~~~l~~~~~d  253 (444)
                      +.......++++|.   |+++.|++++..
T Consensus       250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          250 AEQGVIGSTAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             GGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             cccccCCceEEEEecccCCCCEEEEECCC
Confidence            33333557899998   887777765543

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.44  E-value=0.00077  Score=60.15  Aligned_cols=271  Identities=11%  Similarity=0.014  Sum_probs=141.4

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee--ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV--SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~--~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      ...+.+|.|. +.+..++ ++..|.|. .....++.-.....  ......+.++..+++.++.++..+.|.. ....++.
T Consensus        35 ~~~~~~v~~~-~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~t  110 (327)
T 2xbg_A           35 TATILDMSFI-DRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQS  110 (327)
T ss_dssp             SSCEEEEEES-SSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSS
T ss_pred             CCcEEEEEEC-CCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCC
Confidence            4578999998 4555666 45567653 33333432111111  1123355565544455555566665433 2233332


Q ss_pred             ccccc---ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeee-cccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         120 QWTNF---NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       120 ~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      -....   .+...+..+.+.+++..++.+. .+.|.. ....++.-.... ...                  ..+..+++
T Consensus       111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~------------------~~~~~~~~  170 (327)
T 2xbg_A          111 WSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAI------------------GVMRNLNR  170 (327)
T ss_dssp             CEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCC------------------CCEEEEEE
T ss_pred             ceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCC------------------cceEEEEE
Confidence            21111   2334577888777666666554 454322 112232221111 111                  14788999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-c-
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-G-  273 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~-  273 (444)
                      .|++.+++++...+..+-.|-. ......+.  ......+..+.+.+++++++++ .+|.+++..... ++....+. . 
T Consensus       171 ~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~-G~tW~~~~~~~  245 (327)
T 2xbg_A          171 SPSGEYVAVSSRGSFYSTWEPG-QTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDN-SENWGELLSPL  245 (327)
T ss_dssp             CTTSCEEEEETTSSEEEEECTT-CSSCEEEE--CCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTE-EEEECCCBCTT
T ss_pred             cCCCcEEEEECCCcEEEEeCCC-CCceeECC--CCCCCccceeEECCCCCEEEEe-CCceEEEecCCC-CCeeEeccCCc
Confidence            9988888776554444444431 11333332  2345568889999988766554 578777764222 22222221 1 


Q ss_pred             --ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhccccccCC
Q psy8152         274 --FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSEEKGD  347 (444)
Q Consensus       274 --h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~  347 (444)
                        +...+.++++.+++.+++++ .+|.| ++....++.-..+.    ....+.++.|...          ..++.++.+|
T Consensus       246 ~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~----------~~~~~~G~~G  313 (327)
T 2xbg_A          246 RRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP----------DQGFILGQKG  313 (327)
T ss_dssp             SSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET----------TEEEEECSTT
T ss_pred             ccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC----------CceEEEcCCc
Confidence              22358889998877766654 56766 44555555433333    2345777777422          2344556677


Q ss_pred             CccccC
Q psy8152         348 SDEKYD  353 (444)
Q Consensus       348 ~i~~W~  353 (444)
                      .|..++
T Consensus       314 ~i~~~~  319 (327)
T 2xbg_A          314 ILLRYV  319 (327)
T ss_dssp             EEEEEC
T ss_pred             eEEEEc
Confidence            665444

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.41  E-value=0.00015  Score=63.93  Aligned_cols=204  Identities=10%  Similarity=0.146  Sum_probs=127.3

Q ss_pred             CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEecc----CC---EEEE-eeC--CCeEEEEEcCC-ceeeee
Q psy8152          96 YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH----SN---IIAT-GGK--ENDLKLWDLNT-TKNIFS  164 (444)
Q Consensus        96 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~-~~~--d~~i~vwd~~~-~~~~~~  164 (444)
                      ...+++.....+-+.+||+ +++.+..+.  .+.++.+..-|.    ++   ++++ .-.  +++|.+|++.. ...+..
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~  115 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS  115 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence            3456666677889999999 677775332  256777777662    22   2233 333  57899997742 222333


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEE--ecC-CC-EEEEEeCCceEEEEEcCCC----CCccceEEEeCCCCCee
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISF--LPN-SD-KVAVCSKQGYVRVYDPKIT----TQRRPVLKVDIPDVALS  236 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~~-~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~~~~i~  236 (444)
                      +......+   .   .     ....+..+|+  +|. +. ++++...+|.+..|++...    ...+.+.+|... ..+.
T Consensus       116 i~~~~~pv---~---t-----~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~E  183 (355)
T 3amr_A          116 MTDPDHPI---A---T-----AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTE  183 (355)
T ss_dssp             CSCTTSCE---E---C-----CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEE
T ss_pred             ccccccCc---C---C-----CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcc
Confidence            31110000   0   0     0014667777  664 33 6888888999999998511    134566777654 4578


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCC----CcceeEec-cc-cCceeEEEe--cCCCC-EEEEEE-CCCcEEEEEcC-
Q psy8152         237 CITTTNQSHYVIVGSTTGDMMAVDLRGK----GKPCYKYK-GF-AGCVKDIAC--PLNEN-LILSVS-LDRHFRVHDFH-  305 (444)
Q Consensus       237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~-~h-~~~i~~~~~--s~~~~-~l~s~~-~dg~i~vw~~~-  305 (444)
                      .+...+...+|+.+-.+.-|..++....    ++.+..+. ++ ...+..|++  .++++ +|++++ .+.++.||+.. 
T Consensus       184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~  263 (355)
T 3amr_A          184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG  263 (355)
T ss_dssp             EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence            8889888889999988876766675520    34554443 22 346788887  45555 666666 56799999997 


Q ss_pred             CCceEEEee
Q psy8152         306 SKKLLRKDY  314 (444)
Q Consensus       306 ~~~~~~~~~  314 (444)
                      +.+.+..+.
T Consensus       264 ~~~~vg~f~  272 (355)
T 3amr_A          264 KNKYVADFR  272 (355)
T ss_dssp             TCCEEEEEE
T ss_pred             CCcEEEEEE
Confidence            667776664

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.38  E-value=0.0012  Score=64.33  Aligned_cols=232  Identities=7%  Similarity=0.018  Sum_probs=136.8

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeecc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      .+|+.+ ..+.|+..++.....  .....+   ..-..+..|+|. +....|+ +-...+.|+.+++........+....
T Consensus         7 ~~Ll~s-~~~~I~~i~l~~~~~--~~~~~~---~~~~~~~~l~~d-~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~   79 (628)
T 4a0p_A            7 AFLLFS-RRADIRRISLETNNN--NVAIPL---TGVKEASALDFD-VTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL   79 (628)
T ss_dssp             CEEEEE-ETTEEEEEESSCTTC--EEECCC---CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred             cEEEEE-eCCcEEEEECCCCCc--ceEEEc---CCCCceEEEEEE-CCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC
Confidence            344443 567899999986552  111111   223567899999 5555555 44557899999987554433332111


Q ss_pred             ccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceee
Q psy8152          86 GEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNI  162 (444)
Q Consensus        86 ~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~  162 (444)
                      ....-+++.+.+..| ++-...+.|.+.++............-.....+++.|....|+.+.  ..+.|...++......
T Consensus        80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~  159 (628)
T 4a0p_A           80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT  159 (628)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence            233345666655544 5545567899999875543321223445678999999544555443  2567777777653322


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      ..... ..                  +...|++.+.++.|..+ ...+.|..+++. ....+ +  +.........+++.
T Consensus       160 ~l~~~-~~------------------~P~GlalD~~~~~LY~aD~~~~~I~~~d~d-G~~~~-v--~~~~l~~P~glav~  216 (628)
T 4a0p_A          160 TLVPN-VG------------------RANGLTIDYAKRRLYWTDLDTNLIESSNML-GLNRE-V--IADDLPHPFGLTQY  216 (628)
T ss_dssp             EEECS-CS------------------SEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCE-E--EEECCSCEEEEEEE
T ss_pred             EEECC-CC------------------CcceEEEccccCEEEEEECCCCEEEEEcCC-CCceE-E--eeccCCCceEEEEE
Confidence            22221 12                  58899999977655544 567899999998 22222 2  22222334577776


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      . +.++++-...+.|...|..+ ++....
T Consensus       217 ~-~~ly~tD~~~~~I~~~dk~t-g~~~~~  243 (628)
T 4a0p_A          217 Q-DYIYWTDWSRRSIERANKTS-GQNRTI  243 (628)
T ss_dssp             T-TEEEEEETTTTEEEEEETTT-CCSCEE
T ss_pred             C-CEEEEecCCCCEEEEEECCC-CCceEE
Confidence            4 45556666678898888766 544333

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.38  E-value=2.4e-06  Score=84.66  Aligned_cols=240  Identities=14%  Similarity=0.068  Sum_probs=129.9

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCC----Cccccceeecccccc
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDF----KNFNTNTDVSFGEGD   89 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~----~~~~~~~~~~~~~~~   89 (444)
                      .+.|+..++.....     ..+.  .....+..|+|. +....|+.+ ...+.|+.+++.+    ......+........
T Consensus       385 ~~~I~~id~~~~~~-----~~~~--~~~~~p~gla~d-~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~  456 (699)
T 1n7d_A          385 RHEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD  456 (699)
T ss_dssp             TTC-CEECTTSCCE-----ECCS--CCCTTCCCCEEE-TTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred             ccceEEEeCCCCcc-----eeee--ccCcceEEEccc-cccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence            34677777665542     1111  223456789999 556666655 4457899999875    222222210011122


Q ss_pred             EEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-CC-CeEEEEEcCCceeeeeee
Q psy8152          90 IVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-KE-NDLKLWDLNTTKNIFSAK  166 (444)
Q Consensus        90 v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~vwd~~~~~~~~~~~  166 (444)
                      -+++.+.+ +++++-...+.|.++++..................+++.|.+.+|+.+. .. +.|.++++........+.
T Consensus       457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~  536 (699)
T 1n7d_A          457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT  536 (699)
T ss_dssp             CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred             eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence            24555444 4455545678899999876543322222234567889998544444433 22 677777765322111111


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH  245 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  245 (444)
                      ...                  .+.+.|+|+|++ .++++-+..+.|..+++. ....+.+............|++..+ .
T Consensus       537 ~~l------------------~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~~~~P~glavd~~-~  596 (699)
T 1n7d_A          537 ENI------------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFED-K  596 (699)
T ss_dssp             SSC------------------SSCCCEEECTTTCCEEEEETTTTEEEEECSS-SSCCEEECCCSSSCSSCCCCEEETT-E
T ss_pred             CCC------------------CCccEEEEeccCCEEEEEecCCCeEEEEccC-CCceEEEEecCCcCCCceEeEEECC-E
Confidence            111                  146789999876 555555667899999987 2222222211111223445666544 4


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC  283 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~  283 (444)
                      ++++....+.|..++..+ ++.+..+.......+.|++
T Consensus       597 lywtd~~~~~V~~~d~~~-G~~~~~i~~~~~~P~~i~v  633 (699)
T 1n7d_A          597 VFWTDIINEAIFSANRLT-GSDVNLLAENLLSPEDMVL  633 (699)
T ss_dssp             EEEECSTTTCEEEEETTT-EEEEECCCTTCSSCCCCCB
T ss_pred             EEEEeCCCCeEEEEEccC-CCceEEeecCCCCCcEEEE
Confidence            555666778899999887 7777766533333444443

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.32  E-value=0.00012  Score=64.59  Aligned_cols=230  Identities=14%  Similarity=0.113  Sum_probs=117.3

Q ss_pred             CcEEEEEE-cC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCC---cc
Q psy8152          55 ESELLIAY-SG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEP---DQ  120 (444)
Q Consensus        55 ~~~l~~~~-~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~---~~  120 (444)
                      +..++.|+ .+     ..+.+||+.+.+....-..+........+..++.+++.|+.+     ..+.+||+.+.+   ..
T Consensus        15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~   94 (301)
T 2vpj_A           15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWY   94 (301)
T ss_dssp             EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCE
T ss_pred             CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeE
Confidence            45666666 32     478899988766443322222122223334567777777754     468899988776   33


Q ss_pred             ccc-cccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         121 WTN-FNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       121 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ... ......-.+++. .++.+++.|+.+     ..+.+||+.+.+-...-.....                . .-.+++
T Consensus        95 ~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~  156 (301)
T 2vpj_A           95 SVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA----------------R-EGAGLV  156 (301)
T ss_dssp             EECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC----------------C-BSCEEE
T ss_pred             ECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC----------------c-ccceEE
Confidence            210 111111112222 267777777754     3578888877543221111111                0 111222


Q ss_pred             EecCCCEEEEEeCC-----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCC
Q psy8152         195 FLPNSDKVAVCSKQ-----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGK  264 (444)
Q Consensus       195 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~  264 (444)
                      . -++++++.|+.+     ..+.+||+. +.....+..+.........+.+  ++++++.|+.+     ..+.+||+.+ 
T Consensus       157 ~-~~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-  231 (301)
T 2vpj_A          157 V-ASGVIYCLGGYDGLNILNSVEKYDPH-TGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRT-  231 (301)
T ss_dssp             E-ETTEEEEECCBCSSCBCCCEEEEETT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-
T ss_pred             E-ECCEEEEECCCCCCcccceEEEEeCC-CCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCC-
Confidence            2 256777777654     468899987 2333333222211111222222  56777777764     4689999987 


Q ss_pred             Cccee--EeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCCCce
Q psy8152         265 GKPCY--KYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHSKKL  309 (444)
Q Consensus       265 ~~~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~~~~  309 (444)
                      .+-..  .+.........+.+  ++++++.|+.+     ..|.+||+.+.+-
T Consensus       232 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  281 (301)
T 2vpj_A          232 DSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW  281 (301)
T ss_dssp             TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred             CcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence            43221  12111111122222  56677777655     3577888877543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.32  E-value=0.00015  Score=64.00  Aligned_cols=230  Identities=10%  Similarity=0.079  Sum_probs=117.3

Q ss_pred             CcccEEEec-CC-----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCC
Q psy8152           5 DDYNIYIGS-ST-----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTD   73 (444)
Q Consensus         5 ~~~~l~~g~-~d-----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~   73 (444)
                      ++..++.|+ .+     ..+.+|++.+.+-     ..+..+.....-.+++..  ++..++.|+.+     ..+.+||+.
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~   86 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-----SFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYT   86 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEE-----EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeE-----EeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECC
Confidence            345677777 33     3688888877662     222222111111223333  46677777754     468999988


Q ss_pred             CCc---cccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEE
Q psy8152          74 FKN---FNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        74 ~~~---~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~  144 (444)
                      +.+   ....-..+.......+...++.+++.|+.+     ..+.+||+.+.+..... ......-.+++. .++++++.
T Consensus        87 ~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~  165 (301)
T 2vpj_A           87 ADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCL  165 (301)
T ss_dssp             CCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEE
T ss_pred             CCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEE
Confidence            776   433322222122222333467777777654     35888888776543211 111111112222 26777788


Q ss_pred             eeCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEE
Q psy8152         145 GGKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVY  214 (444)
Q Consensus       145 ~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~  214 (444)
                      |+.+     ..+.+||+.+.+-...-.....                . .-.+++. -++++++.|+.+     ..+.+|
T Consensus       166 GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~y  227 (301)
T 2vpj_A          166 GGYDGLNILNSVEKYDPHTGHWTNVTPMATK----------------R-SGAGVAL-LNDHIYVVGGFDGTAHLSSVEAY  227 (301)
T ss_dssp             CCBCSSCBCCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETTEEEEECCBCSSSBCCCEEEE
T ss_pred             CCCCCCcccceEEEEeCCCCcEEeCCCCCcc----------------c-ccceEEE-ECCEEEEEeCCCCCcccceEEEE
Confidence            7754     4578888877543322110000                0 1112222 256777777664     468999


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG  263 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  263 (444)
                      |+. +.....+..+.........+.+  ++++++.|+.+     ..|.+||+.+
T Consensus       228 d~~-~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~  278 (301)
T 2vpj_A          228 NIR-TDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII  278 (301)
T ss_dssp             ETT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred             eCC-CCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC
Confidence            988 3333333222221111222222  66777777765     3577888776

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.30  E-value=0.0018  Score=57.78  Aligned_cols=228  Identities=8%  Similarity=0.018  Sum_probs=120.1

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec-cccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS-FGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      ...+.+|.|. + +..+ .++..+.|+. ....++.-...... .+...+..+.  +++..++ ++..+.|.. ....++
T Consensus        79 ~~~~~~i~~~-~-~~~~-~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~g~v~~-S~DgG~  152 (327)
T 2xbg_A           79 DYRFNSVSFQ-G-NEGW-IVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEM-ITNVGAIYR-TKDSGK  152 (327)
T ss_dssp             CCEEEEEEEE-T-TEEE-EEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEE-EETTCCEEE-ESSTTS
T ss_pred             CccEEEEEec-C-CeEE-EEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEE-EeCCccEEE-EcCCCC
Confidence            4578899998 4 4444 4455565544 22333322222111 1122344443  4454454 445565422 122232


Q ss_pred             ccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         119 DQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       119 ~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      .-. ........+..+++.+++.+++.+...+..+-+|-  .+-+.+. . ...                  ..+..+.+
T Consensus       153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~-~~~------------------~~~~~~~~  212 (327)
T 2xbg_A          153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-R-TTS------------------RRLHNMGF  212 (327)
T ss_dssp             SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-C-CSS------------------SCEEEEEE
T ss_pred             CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-C-CCC------------------CccceeEE
Confidence            221 12234567889999998887777654433333332  1112221 1 111                  14788889


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  271 (444)
                      .+++.+++ ++.+|.+++....   ....-..+.    .....+..+++.+++.+++++. +|.| ++.... ++.-..+
T Consensus       213 ~~~g~~~~-~~~~G~~~~s~~D---~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~Dg-G~tW~~~  285 (327)
T 2xbg_A          213 TPDGRLWM-IVNGGKIAFSDPD---NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDG-GQTWQQD  285 (327)
T ss_dssp             CTTSCEEE-EETTTEEEEEETT---EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESST-TSSCEEC
T ss_pred             CCCCCEEE-EeCCceEEEecCC---CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCC-CcccEEc
Confidence            88887654 4567887776422   111111111    1223578899998877776664 6666 344444 5444444


Q ss_pred             c---cccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         272 K---GFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       272 ~---~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      .   .+...+.++.|.+++ .+++++.+|.|.-++
T Consensus       286 ~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          286 VDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV  319 (327)
T ss_dssp             GGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred             CccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence            3   234567888887544 466777888776665

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=98.29  E-value=0.00023  Score=62.91  Aligned_cols=229  Identities=13%  Similarity=0.127  Sum_probs=118.9

Q ss_pred             cccEEEecC--CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC----CeEEEEeCCCCcccc
Q psy8152           6 DYNIYIGSS--TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG----QKIKIYDTDFKNFNT   79 (444)
Q Consensus         6 ~~~l~~g~~--dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d----~~i~vw~~~~~~~~~   79 (444)
                      +..++.|+.  ...+.+||..+.+-     ..+..+.....-.+++..  ++..++.|+.+    ..+.+||+.+.+...
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~   84 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSW-----TDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYS   84 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEE-----EECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCE-----ecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence            456777765  35788888887762     222222111111222222  46677777754    678899988776544


Q ss_pred             ceeeccccccEEEEEeCCCeEEEEecC------CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEeeC-----
Q psy8152          80 NTDVSFGEGDIVGVSRYDECILTAVKS------GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATGGK-----  147 (444)
Q Consensus        80 ~~~~~~~~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-----  147 (444)
                      .-..+.......+...++++++.|+.+      ..+.+||+.+.+....- ......-.+++. .++++++.|+.     
T Consensus        85 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~  163 (306)
T 3ii7_A           85 KLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNV  163 (306)
T ss_dssp             EECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTT
T ss_pred             CCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCC
Confidence            322222122223334467777777765      45888998876543210 111111112222 26677777764     


Q ss_pred             ----CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcCC
Q psy8152         148 ----ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPKI  218 (444)
Q Consensus       148 ----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~  218 (444)
                          -..+.+||+.+.+-...- ....                +..-.+++.. ++++++.|+.+     ..+.+||+. 
T Consensus       164 ~~~~~~~~~~yd~~~~~W~~~~-~~p~----------------~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~-  224 (306)
T 3ii7_A          164 SGRVLNSCEVYDPATETWTELC-PMIE----------------ARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIK-  224 (306)
T ss_dssp             TCEECCCEEEEETTTTEEEEEC-CCSS----------------CCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETT-
T ss_pred             cccccceEEEeCCCCCeEEECC-Cccc----------------hhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCC-
Confidence                345788888876432211 1110                0011222222 55677777653     368899988 


Q ss_pred             CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152         219 TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG  263 (444)
Q Consensus       219 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  263 (444)
                      ......+..+........++.+  ++++++.|+.+     ..+.+||+.+
T Consensus       225 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~  272 (306)
T 3ii7_A          225 LNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET  272 (306)
T ss_dssp             TTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred             CCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence            3333333222222222233333  66777778754     4578888876

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.28  E-value=0.00059  Score=63.44  Aligned_cols=237  Identities=11%  Similarity=0.017  Sum_probs=127.5

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC-----eEEEEeCCCCccc--
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ-----KIKIYDTDFKNFN--   78 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~-----~i~vw~~~~~~~~--   78 (444)
                      ...|+++...+.|+.+++.++..     ..+.  .......+|+|+ ++++ |+.+...+     .+...+.. +...  
T Consensus       152 ~g~Lyv~D~~~~I~~id~~~g~v-----~~~~--~~~~~P~giavd-~dG~-lyVad~~~~~~~~gv~~~~~~-~~~~~~  221 (433)
T 4hw6_A          152 YDDLYWVGQRDAFRHVDFVNQYV-----DIKT--TNIGQCADVNFT-LNGD-MVVVDDQSSDTNTGIYLFTRA-SGFTER  221 (433)
T ss_dssp             TCEEEEECBTSCEEEEETTTTEE-----EEEC--CCCSCEEEEEEC-TTCC-EEEEECCSCTTSEEEEEECGG-GTTCCE
T ss_pred             CCEEEEEeCCCCEEEEECCCCEE-----EEee--cCCCCccEEEEC-CCCC-EEEEcCCCCcccceEEEEECC-CCeecc
Confidence            35566665557888888776652     2221  234568899999 7888 55444321     23333322 2221  


Q ss_pred             cceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEEE-EeeCCCeEEEE
Q psy8152          79 TNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNIIA-TGGKENDLKLW  154 (444)
Q Consensus        79 ~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw  154 (444)
                      ..+. ......-.++.+ ++.++++-..++.|+.++..++.....+..  ....-..++|+|+++.|+ +-...+.|+.+
T Consensus       222 ~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~  300 (433)
T 4hw6_A          222 LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRV  300 (433)
T ss_dssp             EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence            1111 111222345667 555555555678899999886765222222  122234799999998554 44557889998


Q ss_pred             EcCC--cee--eeeeecccceeeEeeeCCCcc-cccCccceeEEEE---------ecCCCEEEEEeCCceEEEEEcCCCC
Q psy8152         155 DLNT--TKN--IFSAKNVSHRVLVYSVKPDEF-DLRRPVWVNGISF---------LPNSDKVAVCSKQGYVRVYDPKITT  220 (444)
Q Consensus       155 d~~~--~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~---------~~~~~~l~~~~~d~~i~i~d~~~~~  220 (444)
                      ++..  +..  ...+.+.....   .+ +++. ....-.....+++         .+++.++++-...+.|+.++..   
T Consensus       301 ~~d~~~~~~~~~~~~ag~~g~~---g~-~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~---  373 (433)
T 4hw6_A          301 DYNRETGKLAVPYIVCGQHSSP---GW-VDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE---  373 (433)
T ss_dssp             EBCTTTCCBCCCEEEEECTTCC---CC-BCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT---
T ss_pred             eCCCCCcccCcEEEEEecCCCC---cc-CCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC---
Confidence            8753  221  11111110000   00 0000 0000113677898         6666777777778899999855   


Q ss_pred             CccceEEEeCC------------------CCCeeEEEEc-cCCCEEEEEcCCCcEEEEEcC
Q psy8152         221 QRRPVLKVDIP------------------DVALSCITTT-NQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       221 ~~~~~~~~~~~------------------~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~  262 (444)
                       + .+.++.+.                  -.....|+++ +++.++++-..++.|+.+++.
T Consensus       374 -G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          374 -G-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             -S-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             -C-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence             2 22222221                  1225678888 567666666667778877754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.23  E-value=0.0022  Score=64.07  Aligned_cols=230  Identities=8%  Similarity=-0.064  Sum_probs=131.1

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCe-EEEEecCCcEEEEEcCCC----CccccccccCCC
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDEC-ILTAVKSGDVKLWRYKTE----PDQWTNFNVGPQ  129 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~-l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~  129 (444)
                      +|+.+.. ..|+..++........+.   ....+.+  +.+.... +++-...+.|+.+++...    .....+......
T Consensus       397 ~Ll~an~-~~Ir~i~l~~~~~~~l~~---~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~  472 (791)
T 3m0c_C          397 YLFFTNR-HEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  472 (791)
T ss_dssp             EEEEECB-SSEEEECTTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             ccccccc-cceeEeeccCCcceeeec---CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCC
Confidence            4444433 568888877655443332   2233344  4554444 445555678888888753    122112223445


Q ss_pred             eEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-
Q psy8152         130 LECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-  207 (444)
Q Consensus       130 v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-  207 (444)
                      ...|++.+.+ +++++-...+.|.+.++........+.....                  ....|++.|...+|+.... 
T Consensus       473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~------------------~P~gIaVDp~~g~LYwtD~g  534 (791)
T 3m0c_C          473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDWG  534 (791)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC------------------CEEEEEEETTTTEEEEEECS
T ss_pred             cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC------------------CcceEEEecCCCCEEEecCC
Confidence            6789998855 5555656678999999875433222221112                  4789999998666655542 


Q ss_pred             -CceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEecc--ccCceeEEE
Q psy8152         208 -QGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKG--FAGCVKDIA  282 (444)
Q Consensus       208 -d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~--h~~~i~~~~  282 (444)
                       .+.|...++.    +.....+ ...-.....|++.+.+..|+.+ ...+.|..+++.. ......+..  .-....+|+
T Consensus       535 ~~~~I~~~~~d----G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~gla  609 (791)
T 3m0c_C          535 TPAKIKKGGLN----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLA  609 (791)
T ss_dssp             SSCEEEEEETT----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEE
T ss_pred             CCCeEEEEecC----CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEE
Confidence             3688888887    2222222 2333567899999766555554 5567899999864 333222222  122345666


Q ss_pred             ecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         283 CPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +.. +.++++-...+.|...+..+++.+..+.
T Consensus       610 v~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~  640 (791)
T 3m0c_C          610 VFE-DKVFWTDIINEAIFSANRLTGSDVNLLA  640 (791)
T ss_dssp             EET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             EeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence            632 3444454566788888877776655553

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.22  E-value=0.0051  Score=60.00  Aligned_cols=232  Identities=9%  Similarity=-0.087  Sum_probs=136.7

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEE
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECM  133 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~  133 (444)
                      .+|+.+ ..+.|+..++.+......+...+- ....+++.+.+..|+ +-...+.|+.+++..................+
T Consensus         7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl   85 (628)
T 4a0p_A            7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM   85 (628)
T ss_dssp             CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred             cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence            345554 447899999986554333322221 222345566555544 44567889988887554332122222456788


Q ss_pred             EEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--CCce
Q psy8152         134 KHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--KQGY  210 (444)
Q Consensus       134 ~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~  210 (444)
                      ++.+. ++++++-...+.|.+.++........+.....                  ....|++.|...+|+...  ..+.
T Consensus        86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~------------------~P~~iavdp~~G~lY~tD~g~~~~  147 (628)
T 4a0p_A           86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD------------------SPRALALDPAEGFMYWTEWGGKPK  147 (628)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC------------------CEEEEEEETTTTEEEEEECSSSCE
T ss_pred             EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC------------------CcccEEEccCCCeEEEeCCCCCCE
Confidence            99874 45555556678899999875432211111111                  378999998665555544  2568


Q ss_pred             EEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCE
Q psy8152         211 VRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       211 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~  289 (444)
                      |...++. ...   ...+...-.....|++++.+..|+. -...+.|..+++.. ... ..+.........|++.. +.+
T Consensus       148 I~r~~~d-G~~---~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG-~~~-~v~~~~l~~P~glav~~-~~l  220 (628)
T 4a0p_A          148 IDRAAMD-GSE---RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG-LNR-EVIADDLPHPFGLTQYQ-DYI  220 (628)
T ss_dssp             EEEEETT-SCS---CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSC-EEEEECCSCEEEEEEET-TEE
T ss_pred             EEEEeCC-CCc---eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC-Cce-EEeeccCCCceEEEEEC-CEE
Confidence            8888887 212   2222234456789999997655554 45667899999875 333 33433334456777764 444


Q ss_pred             EEEEECCCcEEEEEcCCCceEEEe
Q psy8152         290 ILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      +++-...+.|...+..+++....+
T Consensus       221 y~tD~~~~~I~~~dk~tg~~~~~l  244 (628)
T 4a0p_A          221 YWTDWSRRSIERANKTSGQNRTII  244 (628)
T ss_dssp             EEEETTTTEEEEEETTTCCSCEEE
T ss_pred             EEecCCCCEEEEEECCCCCceEEE
Confidence            555555788999998777654443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.20  E-value=0.00047  Score=60.88  Aligned_cols=189  Identities=13%  Similarity=0.168  Sum_probs=120.1

Q ss_pred             cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC----CC---EEEEE-eC--
Q psy8152         138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN----SD---KVAVC-SK--  207 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~-~~--  207 (444)
                      ...+++.....+-|.+||+ .++.+..+..  .                  .++.+..-|.    ++   ++++. ..  
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g------------------~~nnVD~r~~~~l~g~~~dla~as~R~~~   97 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--G------------------KLNNVDIRYDFPLNGKKVDIAAASNRSEG   97 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--S------------------CEEEEEEEEEEEETTEEEEEEEEEECSTT
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--C------------------CcccEEEecccccCCceEeEEEEeCCCCC
Confidence            3455666667788999999 7888877753  2                  2455555442    21   23333 33  


Q ss_pred             CceEEEEEcCCCCCccceEEEeC-------CCCCeeEEEE--ccC-CC-EEEEEcCCCcEEEEEcCC------CCcceeE
Q psy8152         208 QGYVRVYDPKITTQRRPVLKVDI-------PDVALSCITT--TNQ-SH-YVIVGSTTGDMMAVDLRG------KGKPCYK  270 (444)
Q Consensus       208 d~~i~i~d~~~~~~~~~~~~~~~-------~~~~i~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~~------~~~~~~~  270 (444)
                      +++|++|++.  .....+..+..       ....+..+|+  +|. +. ++++...+|.+..|++..      ..+.+++
T Consensus        98 ~n~l~vf~iD--p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~  175 (355)
T 3amr_A           98 KNTIEIYAID--GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA  175 (355)
T ss_dssp             CCEEEEEEEC--TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred             CCeEEEEEEC--CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence            5799999884  12223443321       1145677888  664 43 688888999999998832      0456677


Q ss_pred             eccccCceeEEEecCCCCEEEEEECCCcEEEEEcC-----CCceEEEee---cCCceeEEEEcCCCcccccchhhhhccc
Q psy8152         271 YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH-----SKKLLRKDY---MQSRLTSILVRSDFSLENETKKEEQEHS  342 (444)
Q Consensus       271 ~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~-----~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~s  342 (444)
                      |.. .+.+-.|+..+...+|+.+-.+..|..++..     +++++..+.   ....+..+++-..-.     ..+.+++|
T Consensus       176 f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~-----g~gyLivS  249 (355)
T 3amr_A          176 FKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD-----GKGYLMAS  249 (355)
T ss_dssp             EEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG-----GCEEEEEE
T ss_pred             ecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC-----CCEEEEEE
Confidence            764 4567888998888899999998777666754     345555543   234678888743310     11234555


Q ss_pred             cccCCCccccCCC
Q psy8152         343 EEKGDSDEKYDPE  355 (444)
Q Consensus       343 ~~~d~~i~~W~~~  355 (444)
                      .-.+++..+|+..
T Consensus       250 sQG~~s~~Vydr~  262 (355)
T 3amr_A          250 SQGNSSYAIYDRQ  262 (355)
T ss_dssp             EGGGTEEEEEESS
T ss_pred             cCCCCEEEEEECC
Confidence            5467789999886

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.18  E-value=0.00064  Score=59.90  Aligned_cols=228  Identities=12%  Similarity=0.130  Sum_probs=115.8

Q ss_pred             cccEEEecCC----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCCCCc
Q psy8152           6 DYNIYIGSST----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTDFKN   76 (444)
Q Consensus         6 ~~~l~~g~~d----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~   76 (444)
                      +..++.|+.+    ..+.+|++.+.+-     ..+..+.....-.+++..  ++..++.|+.+     ..+.+||..+.+
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~   88 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERW-----HQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQ   88 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEE-----EEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcE-----eEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCc
Confidence            4566777653    4578888877652     222222111111222222  46677777754     468889988766


Q ss_pred             cccceeeccccccEEEEEeCCCeEEEEecCC-----cEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEEEEeeCC-
Q psy8152          77 FNTNTDVSFGEGDIVGVSRYDECILTAVKSG-----DVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNIIATGGKE-  148 (444)
Q Consensus        77 ~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-  148 (444)
                      ....-..+.......+...++.+++.|+.++     .+.+||+.+.+... ...  ....-.+++. .++++++.|+.+ 
T Consensus        89 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~  166 (302)
T 2xn4_A           89 WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAPMNTRRSSVGVGV-VGGLLYAVGGYDV  166 (302)
T ss_dssp             EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEE-ETTEEEEECCEET
T ss_pred             eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCCCCCcccCceEEE-ECCEEEEEeCCCC
Confidence            5433222221222223345677777777653     47788877665432 111  1111112222 266777777643 


Q ss_pred             ------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcC
Q psy8152         149 ------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPK  217 (444)
Q Consensus       149 ------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~  217 (444)
                            ..+.+||+.+.+-...-.....                . .-.+++. -++++++.|+.+     ..+.+||+.
T Consensus       167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~  228 (302)
T 2xn4_A          167 ASRQCLSTVECYNATTNEWTYIAEMSTR----------------R-SGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPT  228 (302)
T ss_dssp             TTTEECCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred             CCCccccEEEEEeCCCCcEEECCCCccc----------------c-ccccEEE-ECCEEEEECCCCCCcccceEEEEeCC
Confidence                  3578888877543221110000                0 1112222 256777777654     368899988


Q ss_pred             CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-----cEEEEEcCC
Q psy8152         218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-----DMMAVDLRG  263 (444)
Q Consensus       218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~  263 (444)
                       +.....+..+....... +++. .++++++.|+.++     .+.+||+.+
T Consensus       229 -~~~W~~~~~~~~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~  276 (302)
T 2xn4_A          229 -TNAWRQVADMNMCRRNA-GVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT  276 (302)
T ss_dssp             -TTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred             -CCCEeeCCCCCCccccC-eEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence             23333332222111111 2222 2667777777653     488888876

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.16  E-value=0.0014  Score=57.42  Aligned_cols=202  Identities=12%  Similarity=0.109  Sum_probs=118.9

Q ss_pred             EEEeCCCeE-EEEecCCcEEEEEcCCCCcccccccc-------CCCeEEEEE---eccCCEEEEee-------------C
Q psy8152          92 GVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNV-------GPQLECMKH---NKHSNIIATGG-------------K  147 (444)
Q Consensus        92 ~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~-------------~  147 (444)
                      .+.+....| ++.-..++|..|+...+.........       ...+..|.|   .|++.++++..             .
T Consensus        19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g   98 (334)
T 2p9w_A           19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG   98 (334)
T ss_dssp             EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred             cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence            344433444 44447899999998765443222222       114689999   57877776543             2


Q ss_pred             CCeEEEEEcC---Cceeeeeeeccc--ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-ceEEEEEcCCCCC
Q psy8152         148 ENDLKLWDLN---TTKNIFSAKNVS--HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-GYVRVYDPKITTQ  221 (444)
Q Consensus       148 d~~i~vwd~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~  221 (444)
                      +..|..||+.   +++.+.......  ....       ............|+..++|+..++++.. +.|...+..    
T Consensus        99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~-------~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd----  167 (334)
T 2p9w_A           99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFE-------KKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD----  167 (334)
T ss_dssp             CCEEEEEESSCCTTCCCSEEEESHHHHHHHH-------HHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT----
T ss_pred             CCEEEEEcCCcCCCCCEEEEecCcccccccc-------ccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC----
Confidence            6789999999   777665543211  0000       0000001147899999999999988888 887777766    


Q ss_pred             ccceEEE--eC----CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--eeEec--cc---cCceeEE-EecCCC
Q psy8152         222 RRPVLKV--DI----PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--CYKYK--GF---AGCVKDI-ACPLNE  287 (444)
Q Consensus       222 ~~~~~~~--~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~--~h---~~~i~~~-~~s~~~  287 (444)
                      ++.+..+  ..    .....+.|+++|+|++|++....|.|..+|+.. ...  +. +.  +.   -.....| ..-.+|
T Consensus       168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~-pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G  245 (334)
T 2p9w_A          168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK-PYAWPEP-VKINGDFGTLSGTEKIVTVPVGN  245 (334)
T ss_dssp             SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS-SSCCCEE-CEESSCCCCCTTEEEEEEEEETT
T ss_pred             CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC-Ccceeec-ccccCCcccccCcccccccccCC
Confidence            2222222  11    122367999999999988887799999999886 322  21 11  21   1122332 333466


Q ss_pred             CE-EEEEECCCcEEEEEcCC
Q psy8152         288 NL-ILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       288 ~~-l~s~~~dg~i~vw~~~~  306 (444)
                      +. |++.+..+.+.+.+...
T Consensus       246 ~vllV~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          246 ESVLVGARAPYAISFRSWDN  265 (334)
T ss_dssp             EEEEEEEETTEEEEEECSST
T ss_pred             EEEEEEcCCCCEEEEECCCC
Confidence            66 55555566555555444

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.14  E-value=2.8e-05  Score=76.99  Aligned_cols=226  Identities=10%  Similarity=-0.061  Sum_probs=126.8

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEE-ecCCcEEEEEcCC----CCccccccccCCCeEEEEEec-c
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTA-VKSGDVKLWRYKT----EPDQWTNFNVGPQLECMKHNK-H  138 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~-~  138 (444)
                      +.|++.++.+......+.. ......+++.+.+..|+.+ ...+.|+.+++..    ......+.........|++.+ .
T Consensus       386 ~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~  464 (699)
T 1n7d_A          386 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH  464 (699)
T ss_dssp             TC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred             cceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence            5778888876655444321 1223334566656655554 4567899999875    222211211223456788876 4


Q ss_pred             CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC--CceEEEEEc
Q psy8152         139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK--QGYVRVYDP  216 (444)
Q Consensus       139 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~i~d~  216 (444)
                      ++++++-...+.|.++++........+.....                  ....|++.|.+.+|+.+..  .+.|..+++
T Consensus       465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~------------------~P~giavDp~~g~ly~td~~~~~~I~~~~~  526 (699)
T 1n7d_A          465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGS------------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGL  526 (699)
T ss_dssp             SBCEECCTTTSCEEEEBSSSCCEEEECCCSSC------------------CCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred             CcEEEEeccCCeEEEEecCCCceEEEEeCCCC------------------CcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence            55555555678899999875433222221111                  3567889887655544432  267888877


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEE
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      .  +....+. +...-.....|+|+|++ +++++-...+.|.++++.. ......+.  ........|++..+ .++++.
T Consensus       527 d--G~~~~~l-~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~~~P~glavd~~-~lywtd  601 (699)
T 1n7d_A          527 N--GVDIYSL-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED-KVFWTD  601 (699)
T ss_dssp             S--SCCCCEE-SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS-SCCEEECCCSSSCSSCCCCEEETT-EEEEEC
T ss_pred             C--CCCeeEE-EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC-CceEEEEecCCcCCCceEeEEECC-EEEEEe
Confidence            6  1111111 11222345789999875 4555556677899999864 32222222  11223345566443 455555


Q ss_pred             ECCCcEEEEEcCCCceEEEee
Q psy8152         294 SLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       294 ~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      ...+.|..++..+++.+..+.
T Consensus       602 ~~~~~V~~~d~~~G~~~~~i~  622 (699)
T 1n7d_A          602 IINEAIFSANRLTGSDVNLLA  622 (699)
T ss_dssp             STTTCEEEEETTTEEEEECCC
T ss_pred             CCCCeEEEEEccCCCceEEee
Confidence            667889999988888777664

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=98.13  E-value=0.00041  Score=61.25  Aligned_cols=229  Identities=10%  Similarity=0.014  Sum_probs=117.1

Q ss_pred             cEEEEEEc--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC----CcEEEEEcCCCCccccc-cccCC
Q psy8152          56 SELLIAYS--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS----GDVKLWRYKTEPDQWTN-FNVGP  128 (444)
Q Consensus        56 ~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~~~~~  128 (444)
                      ..++.|+.  ...+.+||..+.+....-..+........+..++.+++.|+.+    ..+.+||+.+.+..... .....
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r   92 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR   92 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence            34455554  3678899988776544322222222223334567777777754    56888998876543211 11111


Q ss_pred             CeEEEEEeccCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152         129 QLECMKHNKHSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV  202 (444)
Q Consensus       129 ~v~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  202 (444)
                      .-.+++ .-++.+++.|+.+      ..+.+||+.+.+-...-.....                . .-.+++. -+++++
T Consensus        93 ~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~iy  153 (306)
T 3ii7_A           93 DSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ----------------R-CSHGMVE-ANGLIY  153 (306)
T ss_dssp             BSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETTEEE
T ss_pred             cceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC----------------c-ceeEEEE-ECCEEE
Confidence            111222 2267777888765      4588888887653221110000                0 1112222 255666


Q ss_pred             EEEeC---------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCCCcc-
Q psy8152         203 AVCSK---------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGKGKP-  267 (444)
Q Consensus       203 ~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~-  267 (444)
                      +.|+.         -..+.+||+. +.....+..+...... .+++.. ++++++.|+.+     ..+.+||+.+ .+- 
T Consensus       154 v~GG~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~  229 (306)
T 3ii7_A          154 VCGGSLGNNVSGRVLNSCEVYDPA-TETWTELCPMIEARKN-HGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKL-NEWK  229 (306)
T ss_dssp             EECCEESCTTTCEECCCEEEEETT-TTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEETTEEBCCEEEEETTT-TEEE
T ss_pred             EECCCCCCCCcccccceEEEeCCC-CCeEEECCCccchhhc-ceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCC-CcEE
Confidence            66653         3458899988 2223333222211111 222222 56777777654     3588999886 431 


Q ss_pred             -eeEeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCCCce
Q psy8152         268 -CYKYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHSKKL  309 (444)
Q Consensus       268 -~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~~~~  309 (444)
                       +..++........+.+  ++++++.|+.+     ..+.+||+.+.+-
T Consensus       230 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W  275 (306)
T 3ii7_A          230 MVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW  275 (306)
T ss_dssp             ECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred             ECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence             1122211122223333  56777777754     4688888887543

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.13  E-value=0.0028  Score=59.27  Aligned_cols=242  Identities=10%  Similarity=0.037  Sum_probs=131.1

Q ss_pred             ccEEEe-cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEee-------eccCCcEEEEEEcCC-------eEEEEe
Q psy8152           7 YNIYIG-SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNW-------GNVEESELLIAYSGQ-------KIKIYD   71 (444)
Q Consensus         7 ~~l~~g-~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~~l~~~~~d~-------~i~vw~   71 (444)
                      ..|+++ ...+.|+++++..+..  ..+..... ........|+|       + +++.+|+++...+       .|.+++
T Consensus       152 ~~Lyv~~~~~~~i~~ID~~~~~v--~~l~~~~~-~~~~~p~~ia~~~~~~~~d-~~G~~lyvad~~~~~~~~~~~V~~i~  227 (496)
T 3kya_A          152 DHLYICYDGHKAIQLIDLKNRML--SSPLNINT-IPTNRIRSIAFNKKIEGYA-DEAEYMIVAIDYDGKGDESPSVYIIK  227 (496)
T ss_dssp             EEEEEEEETEEEEEEEETTTTEE--EEEECCTT-SSCSBEEEEEECCCBTTTB-CTTCEEEEEECCCTTGGGEEEEEEEE
T ss_pred             CEEEEEECCCCeEEEEECCCCEE--EEEEccCc-cccCCCcEEEEeecccccC-CCCCEEEEEeCCCCCcccCceEEEEe
Confidence            344444 3346788888777663  22211111 12346899999       9 7888777766543       255665


Q ss_pred             CCC-Cccc-----cceeeccccccEEEEEeCC-CeEEEEecCCcEEEEEcC-------CCCc-----------cccc--c
Q psy8152          72 TDF-KNFN-----TNTDVSFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYK-------TEPD-----------QWTN--F  124 (444)
Q Consensus        72 ~~~-~~~~-----~~~~~~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~-------~~~~-----------~~~~--~  124 (444)
                      ... +...     ..+.. .....-.++.|++ .++++-...+.|..+++.       ++..           ...+  .
T Consensus       228 r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~  306 (496)
T 3kya_A          228 RNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI  306 (496)
T ss_dssp             CCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC
T ss_pred             cCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec
Confidence            333 3332     12221 1122334667754 455556677889999987       5553           1111  1


Q ss_pred             ccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCC--ceee--eeeecccceeeEeeeCCCc--ccccCcccee-EEEEe
Q psy8152         125 NVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNT--TKNI--FSAKNVSHRVLVYSVKPDE--FDLRRPVWVN-GISFL  196 (444)
Q Consensus       125 ~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~-~~~~~  196 (444)
                      ........++|+|++++|+ +-+..+.|+.++...  +...  ..+-+....   ..+. ++  ...... ... .++..
T Consensus       307 ~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~---~G~~-DG~~~~a~f~-~P~~gv~vd  381 (496)
T 3kya_A          307 ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ---SGYR-DDVGTEARMN-NPCQGVFVK  381 (496)
T ss_dssp             SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB---CCCB-CCBGGGCBCS-SEEEEEEEE
T ss_pred             CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC---Cccc-CCcccccccC-CCeEEEEEc
Confidence            2234467999999999544 445677888866543  2210  122111000   0000 11  001111 234 44554


Q ss_pred             -------cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------------------------CCCeeEEEEccC-C
Q psy8152         197 -------PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------------------------DVALSCITTTNQ-S  244 (444)
Q Consensus       197 -------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------------------~~~i~~~~~~~~-~  244 (444)
                             +.+.++++-..+++|+.++..    + .+.++.+.                        -.....|+++++ +
T Consensus       382 ~~~~~~~~~g~lyVaD~~N~rIr~i~~~----G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g  456 (496)
T 3kya_A          382 NPDYTGEEEYDFYFVDRLNFCVRKVTPE----G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE  456 (496)
T ss_dssp             CTTCCSSCCEEEEEEEGGGTEEEEECTT----C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred             cccccccCCCeEEEEECCCCEEEEEeCC----C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence                   456677777778899999854    2 23333221                        123467888886 7


Q ss_pred             CEEEEEcCCCcEEEEEcCC
Q psy8152         245 HYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~  263 (444)
                      .++++=..+..|+.+++..
T Consensus       457 ~lyVaD~~N~rIrki~~~~  475 (496)
T 3kya_A          457 MFYVHDQVGHTIRTISMEQ  475 (496)
T ss_dssp             EEEEEETTTTEEEEEEECC
T ss_pred             EEEEEeCCCCEEEEEECCC
Confidence            7666666777888888776

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.11  E-value=0.00039  Score=61.27  Aligned_cols=230  Identities=10%  Similarity=0.007  Sum_probs=112.7

Q ss_pred             CcEEEEEEcC----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCccccc-c
Q psy8152          55 ESELLIAYSG----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWTN-F  124 (444)
Q Consensus        55 ~~~l~~~~~d----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~-~  124 (444)
                      +..++.|+.+    ..+.+||+.+.+....-..+........+..++.+++.|+.+     ..+.+||..+.+..... .
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~   95 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM   95 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence            3455555543    467888887765433222111111112233466777777654     35888888776543211 0


Q ss_pred             ccCCCeEEEEEeccCCEEEEeeCCC-----eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         125 NVGPQLECMKHNKHSNIIATGGKEN-----DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       125 ~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      .....-.+++. .++.+++.|+.++     .+.+||+.+.+-...-.....                . .-.+++. -++
T Consensus        96 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~  156 (302)
T 2xn4_A           96 RDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR----------------R-SSVGVGV-VGG  156 (302)
T ss_dssp             SSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETT
T ss_pred             CccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc----------------c-cCceEEE-ECC
Confidence            11111112222 2677777777653     467788776543221110000                0 1112222 255


Q ss_pred             CEEEEEeCC-------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCCCcc
Q psy8152         200 DKVAVCSKQ-------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGKGKP  267 (444)
Q Consensus       200 ~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~  267 (444)
                      ++++.|+.+       ..+.+||+. +.....+..+.........+.+  ++++++.|+.+     ..+.+||+.+ .+-
T Consensus       157 ~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W  232 (302)
T 2xn4_A          157 LLYAVGGYDVASRQCLSTVECYNAT-TNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT-NAW  232 (302)
T ss_dssp             EEEEECCEETTTTEECCCEEEEETT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT-TEE
T ss_pred             EEEEEeCCCCCCCccccEEEEEeCC-CCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC-CCE
Confidence            667766542       358889987 3333333222222222222222  56777777764     3688999886 432


Q ss_pred             ee--EeccccCceeEEEecCCCCEEEEEECCC-----cEEEEEcCCCce
Q psy8152         268 CY--KYKGFAGCVKDIACPLNENLILSVSLDR-----HFRVHDFHSKKL  309 (444)
Q Consensus       268 ~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg-----~i~vw~~~~~~~  309 (444)
                      ..  .+.........+.  .++++++.|+.++     .+.+||+.+.+-
T Consensus       233 ~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  279 (302)
T 2xn4_A          233 RQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW  279 (302)
T ss_dssp             EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred             eeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence            21  1111111111222  2566777777553     478888877543

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.07  E-value=0.0028  Score=57.10  Aligned_cols=234  Identities=12%  Similarity=0.091  Sum_probs=116.9

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec---cccccE--EEEEeC---CCeEEEEec-C-----Cc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS---FGEGDI--VGVSRY---DECILTAVK-S-----GD  108 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~---~~~~~v--~~~s~~---~~~l~~~~~-d-----g~  108 (444)
                      .....|+|. |++. |+++...|.|++++  .++........   ......  ++++|+   +..|+++.. .     +.
T Consensus        31 ~~P~~ia~~-pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~  106 (352)
T 2ism_A           31 EVPWALAFL-PDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ  106 (352)
T ss_dssp             SCEEEEEEC-TTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred             CCceEEEEc-CCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence            456899999 7887 45556669999998  34321111110   112223  445666   445554433 2     56


Q ss_pred             EEEEEcCCCCc-----ccc-cc---ccCCCeEEEEEeccCCEEEEeeCC-------------CeEEEEEcCCceeeee--
Q psy8152         109 VKLWRYKTEPD-----QWT-NF---NVGPQLECMKHNKHSNIIATGGKE-------------NDLKLWDLNTTKNIFS--  164 (444)
Q Consensus       109 i~iw~~~~~~~-----~~~-~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~--  164 (444)
                      |..|++..+..     +.. +.   ........++|.|+|.++++.+..             |.|.-++... +....  
T Consensus       107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~np  185 (352)
T 2ism_A          107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNP  185 (352)
T ss_dssp             EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCT
T ss_pred             EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCc
Confidence            77787764321     111 11   111234689999999766664432             3344443331 00000  


Q ss_pred             ee---cccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCce--------EEEEEcCCC-------------
Q psy8152         165 AK---NVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGY--------VRVYDPKIT-------------  219 (444)
Q Consensus       165 ~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~--------i~i~d~~~~-------------  219 (444)
                      +.   +....+...-         + .....++|+| ++.++++-.....        |.+......             
T Consensus       186 f~~~~~~~~~i~a~G---------~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~  255 (352)
T 2ism_A          186 FLGRRGARPEVYSLG---------H-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDP  255 (352)
T ss_dssp             TTTCTTSCTTEEEEC---------C-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred             ccCCCCCCccEEEEc---------C-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCC
Confidence            00   0000000000         0 0267789999 5665555433333        333221100             


Q ss_pred             CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc------eeEeccccCceeEEEecCCCCEEEEE
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP------CYKYKGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      ....++..+..+ .....++| .+|.++++....+.|...++.. ...      ...+..-...+..+++.|+|.++++.
T Consensus       256 ~~~~p~~~~~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~-~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~  332 (352)
T 2ism_A          256 RYRDPLYFWPQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEG-ERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT  332 (352)
T ss_dssp             TSCCCSEECTTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEE-ETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred             CCcCCeEecCCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECC-CCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence            001344444323 34567888 4677777777777888887765 321      12222223578899999999866665


Q ss_pred             E
Q psy8152         294 S  294 (444)
Q Consensus       294 ~  294 (444)
                      .
T Consensus       333 ~  333 (352)
T 2ism_A          333 S  333 (352)
T ss_dssp             C
T ss_pred             e
Confidence            3

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=98.05  E-value=0.0009  Score=59.13  Aligned_cols=230  Identities=12%  Similarity=0.008  Sum_probs=115.0

Q ss_pred             CcccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----C-----CeEEEEe
Q psy8152           5 DDYNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----G-----QKIKIYD   71 (444)
Q Consensus         5 ~~~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d-----~~i~vw~   71 (444)
                      ++.+++.|+.    -..+.+|+..+.+-     ..+..+.....-.+++..  ++..++.|+.    +     ..+.+||
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d   96 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-----LRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYN   96 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEE-----EECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeE-----eECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEEC
Confidence            3456666663    24678888877662     222222111111223333  4666666665    2     4688899


Q ss_pred             CCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEe
Q psy8152          72 TDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATG  145 (444)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~  145 (444)
                      +.+.+....-..+...........++++++.|+.+     ..+.+||+.+.+..... ......-.+++.. ++.+++.|
T Consensus        97 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G  175 (308)
T 1zgk_A           97 PMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVG  175 (308)
T ss_dssp             TTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred             CCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEe
Confidence            88766443322222122222333467777777644     35888888776543211 0111111122222 67777777


Q ss_pred             eCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEE
Q psy8152         146 GKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYD  215 (444)
Q Consensus       146 ~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d  215 (444)
                      +.+     ..+.+||+.+.+-... .....                +..-.+++.. ++++++.|+.+     ..+.+||
T Consensus       176 G~~~~~~~~~~~~yd~~~~~W~~~-~~~p~----------------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd  237 (308)
T 1zgk_A          176 GFDGTNRLNSAECYYPERNEWRMI-TAMNT----------------IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYD  237 (308)
T ss_dssp             CBCSSCBCCCEEEEETTTTEEEEC-CCCSS----------------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEE
T ss_pred             CCCCCCcCceEEEEeCCCCeEeeC-CCCCC----------------ccccceEEEE-CCEEEEEeCCCCCCccceEEEEe
Confidence            754     4578888876543221 11000                0011222222 56777777664     4689999


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG  263 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  263 (444)
                      +. ......+..+.........+.+  ++++++.|+.+     ..+.+||+.+
T Consensus       238 ~~-~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~  287 (308)
T 1zgk_A          238 VE-TETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDT  287 (308)
T ss_dssp             TT-TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             CC-CCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence            88 3333332222221111222222  56777777654     3577888776

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.03  E-value=0.0033  Score=61.27  Aligned_cols=227  Identities=12%  Similarity=0.052  Sum_probs=121.4

Q ss_pred             cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCCCCccccceeecc-ccccE
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY-SGQKIKIYDTDFKNFNTNTDVSF-GEGDI   90 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~-~~~~v   90 (444)
                      .....|+..++......   ...+.  ..-..+.+|+|+ +.+..|+.+. ..+.|+.+++........+...+ ....-
T Consensus        15 ~~~~~I~~i~~~~~~~~---~~~~~--~~~~~~~~ld~~-~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~G   88 (619)
T 3s94_A           15 ANRRDLRLVDATNGKEN---ATIVV--GGLEDAAAVDFV-FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG   88 (619)
T ss_dssp             ECSSBEEEECCC------------C--BCCSCEEEEEEE-TTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEE
T ss_pred             eccccEEEEeCCCCcce---EEEEE--cCCCceEEEEEE-eCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCe
Confidence            34567888888654310   01111  234557899999 5566666554 46789888887543212211111 22333


Q ss_pred             EEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeec
Q psy8152          91 VGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        91 ~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~  167 (444)
                      +++.+.++. +++-...+.|.+.++............-.....|++.|.+..|+.+..  .+.|...++...........
T Consensus        89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~  168 (619)
T 3s94_A           89 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS  168 (619)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred             EEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC
Confidence            556665554 444556788999998765433222234455778999996555544432  35676666654222211111


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCE
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHY  246 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  246 (444)
                      ...                  +.+.|++.+.+..|..+ ...+.|..+++. ....+.+.  .........|++..+ .+
T Consensus       169 ~~~------------------~P~Glald~~~~~LY~aD~~~~~I~~~~~d-G~~~~~~~--~~~~~~P~gi~~~~~-~l  226 (619)
T 3s94_A          169 EIY------------------WPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAVV--KGSLPHPFALTLFED-IL  226 (619)
T ss_dssp             SCS------------------SEEEEEEETTTTEEEEEETTTCCEEEESSS-CCEEC-----------CCCEEESSS-EE
T ss_pred             CCC------------------CCcEEEEEccCCEEEEEeCCCCeEEEecCC-CCccEEEE--eCCCCCceEEEEeCC-EE
Confidence            111                  57899999876555544 556789999887 22222221  111122356777655 45


Q ss_pred             EEEEcCCCcEEEEEcCCCCcce
Q psy8152         247 VIVGSTTGDMMAVDLRGKGKPC  268 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~~~~  268 (444)
                      +++-...+.|...|..+ ++.+
T Consensus       227 y~td~~~~~V~~~d~~t-g~~~  247 (619)
T 3s94_A          227 YWTDWSTHSILACNKYT-GEGL  247 (619)
T ss_dssp             EEECTTTCSEEEEESSS-CCCC
T ss_pred             EEecCCCCEEEEEECCC-Cccc
Confidence            55556677898888876 5433

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=98.01  E-value=0.0011  Score=58.80  Aligned_cols=227  Identities=8%  Similarity=-0.010  Sum_probs=111.6

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----C-------CeEEEEeCCCC
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----G-------QKIKIYDTDFK   75 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d-------~~i~vw~~~~~   75 (444)
                      .+++.|+  ..+.+||..+++-..   ..+.  .........+.. .++..++.|+.    +       ..+.+||..+.
T Consensus         6 ~l~~~GG--~~~~~yd~~~~~W~~---~~~~--~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~   77 (315)
T 4asc_A            6 LIFMISE--EGAVAYDPAANECYC---ASLS--SQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS   77 (315)
T ss_dssp             EEEEEET--TEEEEEETTTTEEEE---EECC--CCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred             EEEEEcC--CceEEECCCCCeEec---CCCC--CCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCC
Confidence            4566666  578999998877321   1111  111111222222 35677777773    1       12778888876


Q ss_pred             ccccceeeccccccEEEEEeCCCeEEEEecC--------CcEEEEEcCCCCccccccccCC-CeEEEEEeccCCEEEEee
Q psy8152          76 NFNTNTDVSFGEGDIVGVSRYDECILTAVKS--------GDVKLWRYKTEPDQWTNFNVGP-QLECMKHNKHSNIIATGG  146 (444)
Q Consensus        76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d--------g~i~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~  146 (444)
                      +....-..+...........++.+++.|+.+        ..+.+||+.+.+... ...... .....+...++++++.|+
T Consensus        78 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG  156 (315)
T 4asc_A           78 EWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE-SDPLPYVVYGHTVLSHMDLVYVIGG  156 (315)
T ss_dssp             EEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECC
T ss_pred             eEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE-CCCCCCcccceeEEEECCEEEEEeC
Confidence            6543322211111112223466677777642        458889988765332 111111 111111223667778887


Q ss_pred             C------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-----eEEEEE
Q psy8152         147 K------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-----YVRVYD  215 (444)
Q Consensus       147 ~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d  215 (444)
                      .      -..+.+||+.+.+-...-.....                . .-.+++. -++++++.|+.++     .+.+||
T Consensus       157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd  218 (315)
T 4asc_A          157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTA----------------R-SLFGATV-HDGRIIVAAGVTDTGLTSSAEVYS  218 (315)
T ss_dssp             BCTTSCBCCCEEEEETTTTEEEECCCCSSC----------------C-BSCEEEE-ETTEEEEEEEECSSSEEEEEEEEE
T ss_pred             CCCCCcccceEEEEeCCCCeEEECCCCCCc----------------h-hceEEEE-ECCEEEEEeccCCCCccceEEEEE
Confidence            6      24688888877543221110000                0 1112222 2567777777644     588899


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--------------cEEEEEcCC
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--------------DMMAVDLRG  263 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~  263 (444)
                      +. +.....+..+.........+.+  ++++++.|+.++              .+.+||+.+
T Consensus       219 ~~-~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~  277 (315)
T 4asc_A          219 IT-DNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE  277 (315)
T ss_dssp             TT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred             CC-CCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence            87 2333333222211111222222  566777776532              366777765

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.97  E-value=0.00084  Score=59.35  Aligned_cols=231  Identities=10%  Similarity=0.040  Sum_probs=114.7

Q ss_pred             CCcEEEEEEc----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec----C-----CcEEEEEcCCCCcc
Q psy8152          54 EESELLIAYS----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK----S-----GDVKLWRYKTEPDQ  120 (444)
Q Consensus        54 ~~~~l~~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~----d-----g~i~iw~~~~~~~~  120 (444)
                      ++..++.|+.    -..+.+||..+.+....-..+...........++.+++.|+.    +     ..+.+||+.+.+..
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~  103 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS  103 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence            3566666663    246889998876654432211111111223446667777765    2     46888888776533


Q ss_pred             ccc-cccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         121 WTN-FNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       121 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ... ......-.+++. -++.+++.|+.+     ..+.+||+.+.+-...-.....                . .-.+++
T Consensus       104 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~  165 (308)
T 1zgk_A          104 PCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR----------------R-IGVGVA  165 (308)
T ss_dssp             ECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC----------------C-BSCEEE
T ss_pred             ECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc----------------c-cceEEE
Confidence            211 011111111222 267777777643     3577888876543221110000                0 111222


Q ss_pred             EecCCCEEEEEeCC-----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCC
Q psy8152         195 FLPNSDKVAVCSKQ-----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGK  264 (444)
Q Consensus       195 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~  264 (444)
                      .. ++++++.|+.+     ..+.+||+. ......+..+.........+.+  ++++++.|+.+     ..+.+||+.+ 
T Consensus       166 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-  240 (308)
T 1zgk_A          166 VL-NRLLYAVGGFDGTNRLNSAECYYPE-RNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET-  240 (308)
T ss_dssp             EE-TTEEEEECCBCSSCBCCCEEEEETT-TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-
T ss_pred             EE-CCEEEEEeCCCCCCcCceEEEEeCC-CCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC-
Confidence            22 56777777654     468889987 2222222222222222222333  66777777664     4689999887 


Q ss_pred             Ccce--eEeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCCCce
Q psy8152         265 GKPC--YKYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHSKKL  309 (444)
Q Consensus       265 ~~~~--~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~~~~  309 (444)
                      .+-.  ..++........+.+  ++++++.|+.+     ..|.+||+.+.+-
T Consensus       241 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  290 (308)
T 1zgk_A          241 ETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTW  290 (308)
T ss_dssp             TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             CcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence            4321  111111111122222  56677777644     3477788776543

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.90  E-value=0.003  Score=56.05  Aligned_cols=227  Identities=10%  Similarity=0.020  Sum_probs=110.2

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----CC-------eEEEEeCCCC
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----GQ-------KIKIYDTDFK   75 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d~-------~i~vw~~~~~   75 (444)
                      ..++.|+.  .+.+||..+.+-..   ..+.. .....-.+++.  .++..++.|+.    ++       .+.+||..+.
T Consensus        17 ~i~~~GG~--~~~~yd~~~~~W~~---~~~~~-~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~   88 (318)
T 2woz_A           17 LILLVNDT--AAVAYDPMENECYL---TALAE-QIPRNHSSIVT--QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS   88 (318)
T ss_dssp             EEEEECSS--EEEEEETTTTEEEE---EEECT-TSCSSEEEEEC--SSSCEEEEESSCC-------CCCBEEEEEETTTT
T ss_pred             hhhhcccc--ceEEECCCCCceec---ccCCc-cCCccceEEEE--ECCEEEEECCcccCccccCCCccccEEEEeCCCC
Confidence            45556654  37889988777311   11111 01111223333  35677777773    11       2778888776


Q ss_pred             ccccceeeccccccEEEEEeCCCeEEEEecC-------CcEEEEEcCCCCccccccccCCCeE-EEEEeccCCEEEEeeC
Q psy8152          76 NFNTNTDVSFGEGDIVGVSRYDECILTAVKS-------GDVKLWRYKTEPDQWTNFNVGPQLE-CMKHNKHSNIIATGGK  147 (444)
Q Consensus        76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~  147 (444)
                      +....-..+...........++.+++.|+.+       ..+.+||+.+.+... ......+.. ..+...++.+++.|+.
T Consensus        89 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~  167 (318)
T 2woz_A           89 EWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVISHNGMIYCLGGK  167 (318)
T ss_dssp             EEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEEETTEEEEECCE
T ss_pred             cEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEEECCEEEEEcCC
Confidence            6544322222111222233467777777764       247788887665432 111111111 1111236777777764


Q ss_pred             ------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEc
Q psy8152         148 ------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDP  216 (444)
Q Consensus       148 ------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~  216 (444)
                            -..+.+||+.+.+-...-.....                . .-.+++.. ++++++.|+.+     ..+.+||+
T Consensus       168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~  229 (318)
T 2woz_A          168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTP----------------R-SMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDL  229 (318)
T ss_dssp             ESSSCBCCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEEE-TTEEEEEEEEETTEEEEEEEEEET
T ss_pred             CCCCCccceEEEEcCCCCEEEECCCCCCC----------------c-ccceEEEE-CCEEEEEcCcCCCCccceEEEEEC
Confidence                  23588889887543221110000                0 11222222 55777777643     35778998


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC--------------CcEEEEEcCC
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT--------------GDMMAVDLRG  263 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~  263 (444)
                      . +.....+..+.........+.  .++++++.|+.+              ..+.+||+.+
T Consensus       230 ~-~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~  287 (318)
T 2woz_A          230 K-TNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK  287 (318)
T ss_dssp             T-TCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred             C-CCeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence            7 333333322222211112222  256677777654              3467777766

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.89  E-value=0.011  Score=53.16  Aligned_cols=229  Identities=13%  Similarity=0.047  Sum_probs=119.2

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-cccceee-ccccccE--EEEEeC---CCeEEEEec----C----C
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTDV-SFGEGDI--VGVSRY---DECILTAVK----S----G  107 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~-~~~~~~v--~~~s~~---~~~l~~~~~----d----g  107 (444)
                      .....|+|. |++. |+++...|.|++++. .++ .+..+.. .......  ++++|+   +..|+++..    +    .
T Consensus        29 ~~P~~ia~~-pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPL-GGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEE-ETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEc-CCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            456899999 6776 555566699999973 444 1111110 0112233  345665   445544433    2    5


Q ss_pred             cEEEEEcCCCC--c-----ccc-cc-ccCCCeEEEEEeccCCEEEEeeCC-------------CeEEEEEcCCce-----
Q psy8152         108 DVKLWRYKTEP--D-----QWT-NF-NVGPQLECMKHNKHSNIIATGGKE-------------NDLKLWDLNTTK-----  160 (444)
Q Consensus       108 ~i~iw~~~~~~--~-----~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~~-----  160 (444)
                      .|..|+.....  .     +.. +. ........++|.|+|.++++.+..             |.|.-++....-     
T Consensus       106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np  185 (354)
T 3a9g_A          106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP  185 (354)
T ss_dssp             EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred             EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence            67777765431  1     100 11 111234679999999877765432             233333332110     


Q ss_pred             ----eeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCc---eEEEEEcCC-------------C
Q psy8152         161 ----NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQG---YVRVYDPKI-------------T  219 (444)
Q Consensus       161 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~---~i~i~d~~~-------------~  219 (444)
                          .+.. .++.                   ....++|+| .+.++++-....   .|.+...-.             .
T Consensus       186 f~~~~i~a-~G~r-------------------np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~  245 (354)
T 3a9g_A          186 FPNSPIWS-YGHR-------------------NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRG  245 (354)
T ss_dssp             STTCCEEE-ECCS-------------------CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred             CCCCcEEE-EccC-------------------CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCC
Confidence                0000 1111                   256899999 566555443322   233332110             0


Q ss_pred             CCccceEEEeCCCCCeeEEEEc-------cCCCEEEEEcCCCcEEEEEcCCCCcce--eEe-ccccCceeEEEecCCCCE
Q psy8152         220 TQRRPVLKVDIPDVALSCITTT-------NQSHYVIVGSTTGDMMAVDLRGKGKPC--YKY-KGFAGCVKDIACPLNENL  289 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~-~~h~~~i~~~~~s~~~~~  289 (444)
                      ....++..+.........++|.       .+|+++++....+.|...++...+...  ..+ .+....+..+++.|+|.+
T Consensus       246 ~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~l  325 (354)
T 3a9g_A          246 EFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGI  325 (354)
T ss_dssp             TSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCE
T ss_pred             CCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcE
Confidence            0113444442223456788883       567788877777888888887512222  222 222457889999999976


Q ss_pred             EEEEE
Q psy8152         290 ILSVS  294 (444)
Q Consensus       290 l~s~~  294 (444)
                      +++..
T Consensus       326 yv~~~  330 (354)
T 3a9g_A          326 LISTS  330 (354)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            66653

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.89  E-value=0.0015  Score=57.84  Aligned_cols=224  Identities=11%  Similarity=0.052  Sum_probs=110.7

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeecc--ccccEEEEEeCCCeEEEEec----C-------CcEEEEEcCCCCccccc
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSF--GEGDIVGVSRYDECILTAVK----S-------GDVKLWRYKTEPDQWTN  123 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~s~~~~~l~~~~~----d-------g~i~iw~~~~~~~~~~~  123 (444)
                      +++.|+  ..+.+||..+++... ...+.  .......+..++.+++.|+.    +       ..+.+||..+.+... +
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~   82 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M   82 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred             EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence            344455  579999998877543 22211  12222233457778888874    1       127778887765432 1


Q ss_pred             cccCCCeE--EEEEeccCCEEEEeeCC--------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         124 FNVGPQLE--CMKHNKHSNIIATGGKE--------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       124 ~~~~~~v~--~~~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      .....+-.  +++.. ++.+++.|+.+        ..+.+||+.+.+-... .....                +..-.++
T Consensus        83 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~----------------~r~~~~~  144 (315)
T 4asc_A           83 PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES-DPLPY----------------VVYGHTV  144 (315)
T ss_dssp             CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC-CCCSS----------------CCBSCEE
T ss_pred             CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC-CCCCC----------------cccceeE
Confidence            11111111  12222 66777777742        4578888877542211 11000                0011222


Q ss_pred             EEecCCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-----cEEEEEcC
Q psy8152         194 SFLPNSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-----DMMAVDLR  262 (444)
Q Consensus       194 ~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~  262 (444)
                      +. -++++++.|+.      -..+.+||+. +.....+..+......-.++.+  ++++++.|+.++     .+.+||+.
T Consensus       145 ~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~  220 (315)
T 4asc_A          145 LS-HMDLVYVIGGKGSDRKCLNKMCVYDPK-KFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT  220 (315)
T ss_dssp             EE-ETTEEEEECCBCTTSCBCCCEEEEETT-TTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred             EE-ECCEEEEEeCCCCCCcccceEEEEeCC-CCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence            22 35567777765      2468899988 2223332222211111122222  667777777654     48889987


Q ss_pred             CCCccee--EeccccCceeEEEecCCCCEEEEEECCC--------------cEEEEEcCCCce
Q psy8152         263 GKGKPCY--KYKGFAGCVKDIACPLNENLILSVSLDR--------------HFRVHDFHSKKL  309 (444)
Q Consensus       263 ~~~~~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg--------------~i~vw~~~~~~~  309 (444)
                      + .+-..  .++........+.+  ++++++.|+.++              .|.+||+.+.+-
T Consensus       221 ~-~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W  280 (315)
T 4asc_A          221 D-NKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW  280 (315)
T ss_dssp             T-TEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred             C-CeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence            6 43221  11111111122222  556777776532              366777776543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.83  E-value=0.017  Score=52.33  Aligned_cols=268  Identities=9%  Similarity=0.072  Sum_probs=157.9

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR   95 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~   95 (444)
                      ..|-|.|+..+..+.+  ..+       .--+.-.+ |..+.||.-. ..++.|+|+++...++.+...   ..|.-+.|
T Consensus        48 ~~vvIiDl~~~~~~~r--rpi-------~AdsAIMn-P~~~iiALra-g~~lQiFnle~K~klks~~~~---e~VvfWkW  113 (494)
T 1bpo_A           48 AQVVIIDMNDPSNPIR--RPI-------SADSAIMN-PASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKW  113 (494)
T ss_dssp             CEEEEEETTSTTSCEE--EEC-------CCSEEEEC-SSSSCEEEEE-TTEEEEEETTTTEEEEEEECS---SCCCEEEE
T ss_pred             CeEEEEECCCCCccee--ccc-------ccceeeeC-CCCcEEEEec-CCeEEEEchHHhhhhcceecC---CCceEEEe
Confidence            3677777776553100  111       11233356 6677777655 589999999998888887643   34444443


Q ss_pred             -CCCeEEEEecCCcEEEEEcCCC-Ccccccccc----CCCeEEEEEeccCCEEEEeeC-------CCeEEEEEcCCceee
Q psy8152          96 -YDECILTAVKSGDVKLWRYKTE-PDQWTNFNV----GPQLECMKHNKHSNIIATGGK-------ENDLKLWDLNTTKNI  162 (444)
Q Consensus        96 -~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~vwd~~~~~~~  162 (444)
                       +.+.|+..+ +..|+-|++... .+++.+..|    ...|..-..+++.++++..+-       .|.+.+|....+. .
T Consensus       114 is~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-s  191 (494)
T 1bpo_A          114 ISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-S  191 (494)
T ss_dssp             EETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-E
T ss_pred             cCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-c
Confidence             344555543 458999998743 343323333    456777788888888875442       4678899887533 3


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc-----eEEE-eC---CCC
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP-----VLKV-DI---PDV  233 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-----~~~~-~~---~~~  233 (444)
                      +.+.+|......+.+....    .+..+.|.+....        ..++++|.++.....+.+     ...+ ..   ...
T Consensus       192 Q~ieGhaa~F~~~~~~g~~----~~~~lf~fa~r~~--------~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D  259 (494)
T 1bpo_A          192 QPIEGHAASFAQFKMEGNA----EESTLFCFAVRGQ--------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND  259 (494)
T ss_dssp             EEECCSEEEEEEEECTTCS----SEEEEEEEEECST--------TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC
T ss_pred             chheeeeeeeEEEecCCCC----CCceEEEEEEecC--------CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC
Confidence            3445555422222221110    0111222222111        136899999862101111     1111 11   123


Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK  312 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~  312 (444)
                      ...++..++.-..++.-+.-|.|++||+.+ +.++..-+-...+|...+.+....-++.....|.|.--.+....++..
T Consensus       260 FPvamqvs~kygviyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy  337 (494)
T 1bpo_A          260 FPVAMQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY  337 (494)
T ss_dssp             CEEEEEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred             ceeEEEecccCCEEEEEecCceEEEEeccc-ceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence            345788888888899999999999999999 999987775556665555555555566666888777777766555443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.81  E-value=0.029  Score=54.57  Aligned_cols=308  Identities=8%  Similarity=-0.082  Sum_probs=154.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc--CCeEEEEeCCCCccccceee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS--GQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~   83 (444)
                      ++.+++-...+.|.+.++.....     ..+.. ..-.....|++. |...+|+.+..  .+.|...++...........
T Consensus        96 ~~ly~~d~~~~~I~v~~~dG~~~-----~~l~~-~~l~~P~~Iavd-p~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~  168 (619)
T 3s94_A           96 EKLYWTDSETNRIEVSNLDGSLR-----KVLFW-QELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS  168 (619)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSC-----EEEEC-SSCSCCCCEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred             CEEEEEeCCCCEEEEEECCCCCE-----EEEEe-CCCCCCceEEEe-cCCCeEEEeccCCCCEEEEEECCCCceEEEEeC
Confidence            34445555667788877765432     11110 223456789999 55555555543  35677777653332222211


Q ss_pred             ccccccEEEEEeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152          84 SFGEGDIVGVSRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        84 ~~~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~  162 (444)
                      ......-+++.+.++.|+.+ ...+.|..+++..................+++..+ .++++-...+.|...|..+++..
T Consensus       169 ~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~  247 (619)
T 3s94_A          169 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL  247 (619)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred             CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence            11122335566666655554 45677888888754333211112222345666544 44455555677888887665432


Q ss_pred             eeeeccc---ceeeE---------------------------------eeeCCCcccc----------------------
Q psy8152         163 FSAKNVS---HRVLV---------------------------------YSVKPDEFDL----------------------  184 (444)
Q Consensus       163 ~~~~~~~---~~~~~---------------------------------~~~~~~~~~~----------------------  184 (444)
                      ..+....   ..+.+                                 ....|.++.+                      
T Consensus       248 ~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~  327 (619)
T 3s94_A          248 REIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTD  327 (619)
T ss_dssp             EECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSC
T ss_pred             EEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccc
Confidence            2111000   00000                                 0001111100                      


Q ss_pred             ------------------cCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-C
Q psy8152         185 ------------------RRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-S  244 (444)
Q Consensus       185 ------------------~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~  244 (444)
                                        ..-..+.+|+|.+.+..|+ +-...+.|+.+++.   .......+...-.....+++.+. +
T Consensus       328 i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~---g~~~~~v~~~~~~~p~GlAvD~~~~  404 (619)
T 3s94_A          328 LRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFID---GSGSQFVVTAQIAHPDGIAVDWVAR  404 (619)
T ss_dssp             EEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTT
T ss_pred             eEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcC---CCccEEEEECCCCCcCceEEecccC
Confidence                              0001245677776544444 33446677777776   21111222222345678999864 5


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEEC--CCcEEEEEcCCCceEEEee--cCCce
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSL--DRHFRVHDFHSKKLLRKDY--MQSRL  319 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~--dg~i~vw~~~~~~~~~~~~--~~~~i  319 (444)
                      ++.++-+..+.|.+.++..  .....+. ..-....+|++.|...+|+.+..  ...|...++..... ..+.  .-...
T Consensus       405 ~lY~tD~~~~~I~v~~~~G--~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~l~~P  481 (619)
T 3s94_A          405 NLYWTDTGTDRIEVTRLNG--TMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNTSLGWP  481 (619)
T ss_dssp             EEEEEETTTTEEEEEETTS--CSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCE
T ss_pred             cEEEEeCCCCcEEEEeCCC--CeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeCCCCCC
Confidence            5556666778899999875  3333333 23346789999997555555443  35666666654322 2222  23456


Q ss_pred             eEEEEcCC
Q psy8152         320 TSILVRSD  327 (444)
Q Consensus       320 ~~~~~~~~  327 (444)
                      +.+++...
T Consensus       482 ~GlalD~~  489 (619)
T 3s94_A          482 NGLALDYD  489 (619)
T ss_dssp             EEEEEETT
T ss_pred             eeeEEccc
Confidence            67777643

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.80  E-value=0.002  Score=58.16  Aligned_cols=160  Identities=11%  Similarity=0.171  Sum_probs=99.0

Q ss_pred             EEeCCCeEEEEecCCcEEEEEcCCCCcccccccc-----CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec
Q psy8152          93 VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV-----GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        93 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~  167 (444)
                      ++.+|..++.+ .++.||.-++...... +....     -..|..+..+|+|++||..+. ..|.|..+..+.....-..
T Consensus        28 ~~~n~t~i~~a-~~n~iR~~~i~~~~~Y-k~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~  104 (452)
T 3pbp_A           28 SSQNGTRIVFI-QDNIIRWYNVLTDSLY-HSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS  104 (452)
T ss_dssp             EETTTTEEEEE-ETTEEEEEETTTCSSC-EEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred             EEcCCCEEEEE-ECCEEEEEECCCCCcc-eEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence            34566666655 3467888777644322 12222     225788999999999999875 5899988874321111000


Q ss_pred             --ccceeeEeeeCCCcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEe---------CCCC
Q psy8152         168 --VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVD---------IPDV  233 (444)
Q Consensus       168 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~~~  233 (444)
                        ..-....+.+.|.  ....+.+|..+.|||-+   ..|++-..|+.|++||+.. ....|. .+.         ....
T Consensus       105 ~~~~~q~~ty~l~~~--~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~-s~~~P~-~L~k~~~~fg~d~~~~  180 (452)
T 3pbp_A          105 IQDAFQIFHYSIDEE--EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN-SQEKPI-VLNKPNNSFGLDARVN  180 (452)
T ss_dssp             HHHTTEEEEEEGGGC--C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC-TTSCCE-EESCCCSEEESCSSCC
T ss_pred             cccccceeEEEcCCc--ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc-CCCCCc-chhccccccCCCcccc
Confidence              0111222233221  11124579999999976   6899999999999999982 223333 232         2236


Q ss_pred             CeeEEEEccCCCEEEEEc--CCCcEEEE
Q psy8152         234 ALSCITTTNQSHYVIVGS--TTGDMMAV  259 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~--~dg~i~iw  259 (444)
                      .|.+++|.+++-.|++.+  ..|.|+-.
T Consensus       181 ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          181 DITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             CEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             eEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence            788999999887777744  77877654

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.76  E-value=0.058  Score=56.46  Aligned_cols=325  Identities=9%  Similarity=0.051  Sum_probs=156.7

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      .+|++|-.+|.+.-+.+..........+.. .++ ..+|.-..|. ..+..-+.+..+....+|.-. ++.... .....
T Consensus       618 ~~L~igl~dG~l~~~~~d~~tg~l~d~r~~-~LG-~~pv~L~~~~-~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~  692 (1158)
T 3ei3_A          618 HYLLCALGDGALFYFGLNIETGLLSDRKKV-TLG-TQPTVLRTFR-SLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLK  692 (1158)
T ss_dssp             EEEEEEETTSEEEEEEECTTTCCEEEEEEE-ECC-SSCCEEEEEE-SSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSS
T ss_pred             cEEEEEeCCCeEEEEEEcCCCCccccceeE-EcC-CCceEEEEEe-eCCceeEEEECCCCEEEEEcC-CceEEe-ccChH
Confidence            578899999998877765422112111111 113 3455544454 333333333334444455433 322211 11110


Q ss_pred             -cccEEEEEeC--CCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-ee
Q psy8152          87 -EGDIVGVSRY--DECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KN  161 (444)
Q Consensus        87 -~~~v~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~  161 (444)
                       -..+..|+..  ..-++..+ ++.++|..+...+... ....-...+..++++|..+.++.+..+..  .++.... .+
T Consensus       693 ~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~--~~~~~~~~~~  769 (1158)
T 3ei3_A          693 EVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIE--VQDTSGGTTA  769 (1158)
T ss_dssp             CCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEE--EECSSSSEEE
T ss_pred             HhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEecc--ccccccccch
Confidence             1123334221  23455443 4569999886543221 23334667889999997776665543211  1111000 00


Q ss_pred             ---------------------------eeeeecccceeeEeeeCCCcc------cccCccceeEEEEe---cC-CCEEEE
Q psy8152         162 ---------------------------IFSAKNVSHRVLVYSVKPDEF------DLRRPVWVNGISFL---PN-SDKVAV  204 (444)
Q Consensus       162 ---------------------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~---~~-~~~l~~  204 (444)
                                                 ...+..........-++|..+      .+.....+.+++..   .+ ..+|++
T Consensus       770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvV  849 (1158)
T 3ei3_A          770 LRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIV  849 (1158)
T ss_dssp             SSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEE
T ss_pred             hhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEE
Confidence                                       000000000000111122211      12222345555532   22 368888


Q ss_pred             Ee----------CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152         205 CS----------KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF  274 (444)
Q Consensus       205 ~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h  274 (444)
                      |+          ..|.|++|++. ....+.+.... ..+++++++-- +|++|++.  ...|++|++.. .+.+..-..+
T Consensus       850 GTa~~~~~e~~~~~Gri~vf~v~-~~kL~lv~~~~-v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~-~~~L~~~~~~  923 (1158)
T 3ei3_A          850 GTAMVYPEEAEPKQGRIVVFQYS-DGKLQTVAEKE-VKGAVYSMVEF-NGKLLASI--NSTVRLYEWTT-EKELRTECNH  923 (1158)
T ss_dssp             EEEECCTTCSSCCCEEEEEEEEE-TTEEEEEEEEE-ESSCEEEEEEE-TTEEEEEE--TTEEEEEEECT-TSCEEEEEEE
T ss_pred             EeeecCCCCCCCCceEEEEEEEE-CCEEEEEEEEE-cCCcCEEEeee-CCEEEEEc--CCEEEEEECCC-CceEEEEeec
Confidence            76          35899999997 22333333332 35677777643 45444433  46899999987 5544411112


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEc--CCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDF--HSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~--~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                      ...|..+.....+++++.|..-..|.++..  ..+++....  .....++++.+-.+          ..++.+..+|.+.
T Consensus       924 ~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~----------~t~l~aD~~gNl~  993 (1158)
T 3ei3_A          924 YNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD----------DNFLGAENAFNLF  993 (1158)
T ss_dssp             CCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET----------TEEEEEETTSEEE
T ss_pred             cccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc----------CcEEEEcCCCcEE
Confidence            222333333335778999988888777654  344443332  35666777777543          2344455666666


Q ss_pred             ccCCC
Q psy8152         351 KYDPE  355 (444)
Q Consensus       351 ~W~~~  355 (444)
                      +....
T Consensus       994 vl~~~  998 (1158)
T 3ei3_A          994 VCQKD  998 (1158)
T ss_dssp             EEEEC
T ss_pred             EEecC
Confidence            65443

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.73  E-value=0.0041  Score=54.41  Aligned_cols=164  Identities=11%  Similarity=0.142  Sum_probs=104.4

Q ss_pred             CeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeee-eeecccceeeEeeeCCCcccccCccceeEEEE---ecCCCEEE
Q psy8152         129 QLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIF-SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF---LPNSDKVA  203 (444)
Q Consensus       129 ~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~  203 (444)
                      ..-+++|++....|+.++ ..++|..|+...+.... .+....+            .......+..|.|   .|++++++
T Consensus        14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~------------~g~~~~~~sGl~~~~~D~~grL~v   81 (334)
T 2p9w_A           14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASS------------NGDGEQQMSGLSLLTHDNSKRLFA   81 (334)
T ss_dssp             CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCC------------SSCCSEEEEEEEESSSSSCCEEEE
T ss_pred             CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccc------------cCCCcceeeEEEEeccCCCCcEEE
Confidence            345789988555555555 78999999987543322 2221110            0000113678999   58876666


Q ss_pred             EEe-------------CCceEEEEEcCCCCCccceEEEeC-------------CCCCeeEEEEccCCCEEEEEcCC-CcE
Q psy8152         204 VCS-------------KQGYVRVYDPKITTQRRPVLKVDI-------------PDVALSCITTTNQSHYVIVGSTT-GDM  256 (444)
Q Consensus       204 ~~~-------------~d~~i~i~d~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~d-g~i  256 (444)
                      +..             .+..|..||+....+.+.+.....             .......|+..++|+..++++.. +.|
T Consensus        82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I  161 (334)
T 2p9w_A           82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI  161 (334)
T ss_dssp             EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred             EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence            543             267899999772112344433321             11247789999999999988888 877


Q ss_pred             EEEEcCCCCcceeEec------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152         257 MAVDLRGKGKPCYKYK------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       257 ~iwd~~~~~~~~~~~~------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~  306 (444)
                      ..++...  +.+..+.      ......+.|+++|++.+|++....|.|..+|+..
T Consensus       162 ~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          162 ARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             EEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             EEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            7777653  3333322      1122367999999999888887799999999874

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.71  E-value=0.012  Score=52.83  Aligned_cols=234  Identities=8%  Similarity=-0.019  Sum_probs=111.6

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccC---CcEEEEEEc-C-----CeEEEEeCCCCc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVE---ESELLIAYS-G-----QKIKIYDTDFKN   76 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~---~~~l~~~~~-d-----~~i~vw~~~~~~   76 (444)
                      ..|+++...|.|++++  .+.  ...+..+... ........|+|+ |+   +..|+++.. .     +.|..|+...+.
T Consensus        42 G~l~V~e~~g~I~~i~--~g~--~~~~~~~~v~~~g~~~p~gia~~-pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~  116 (352)
T 2ism_A           42 GGMLIAERPGRIRLFR--EGR--LSTYAELSVYHRGESGLLGLALH-PRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGER  116 (352)
T ss_dssp             SCEEEEETTTEEEEEE--TTE--EEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEECTTSSEEEEEEEEECSSC
T ss_pred             CeEEEEeCCCeEEEEE--CCC--ccEeecceEeecCCCCceeEEEC-CCCCCCCEEEEEEecCCCCCccEEEEEEeCCCC
Confidence            3477777779999888  333  1212222211 224567899999 56   455555443 2     578788776432


Q ss_pred             c---ccc---ee---eccccccEEEEEeCCCeEEEEec-------------CCcEEEEEcCCC------------Ccccc
Q psy8152          77 F---NTN---TD---VSFGEGDIVGVSRYDECILTAVK-------------SGDVKLWRYKTE------------PDQWT  122 (444)
Q Consensus        77 ~---~~~---~~---~~~~~~~v~~~s~~~~~l~~~~~-------------dg~i~iw~~~~~------------~~~~~  122 (444)
                      .   ...   +.   ...|...-+.+.|+|.++++.+.             .|.|.-++....            .....
T Consensus       117 ~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i  196 (352)
T 2ism_A          117 GVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEV  196 (352)
T ss_dssp             EEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTE
T ss_pred             cCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccE
Confidence            1   111   11   11244556778899976665432             145555554421            00101


Q ss_pred             -ccccCCCeEEEEEec-cCCEEEEeeCCCeE------EEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         123 -NFNVGPQLECMKHNK-HSNIIATGGKENDL------KLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       123 -~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i------~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                       ..++ .....++|+| ++.++++-...+.+      .|.-+..+... -+...........+.+.-...........++
T Consensus       197 ~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~ny-Gwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~  274 (352)
T 2ism_A          197 YSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNY-GWPRVVGRGNDPRYRDPLYFWPQGFPPGNLA  274 (352)
T ss_dssp             EEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBC-CTTTCCSCCCCTTSCCCSEECTTCCCEEEEE
T ss_pred             EEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcC-CCCcccCCCCCCCCcCCeEecCCCCCCcceE
Confidence             1112 2356788998 66655543332221      12222221100 0000000000000000000000112356777


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccc------eEEEeCCCCCeeEEEEccCCCEEEEEc
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRP------VLKVDIPDVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~  251 (444)
                      | .++.++++....+.|...++.   ....      ...+......+..+++.|+|.++++..
T Consensus       275 ~-~~G~l~v~~~~~~~v~~v~~~---~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          275 F-FRGDLYVAGLRGQALLRLVLE---GERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             E-ETTEEEEEETTTTEEEEEEEE---EETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             E-ECCEEEEEECCCCEEEEEEEC---CCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            7 466777766677788888876   2211      122222235688999999997766653

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.70  E-value=0.0031  Score=56.94  Aligned_cols=238  Identities=11%  Similarity=-0.001  Sum_probs=113.1

Q ss_pred             CCcEEEEEEc-CCeEEEEeCCC--Cccccceeec-cccccEEEEEeCCCeEEEEec-C---------CcEEEEEcCCCCc
Q psy8152          54 EESELLIAYS-GQKIKIYDTDF--KNFNTNTDVS-FGEGDIVGVSRYDECILTAVK-S---------GDVKLWRYKTEPD  119 (444)
Q Consensus        54 ~~~~l~~~~~-d~~i~vw~~~~--~~~~~~~~~~-~~~~~v~~~s~~~~~l~~~~~-d---------g~i~iw~~~~~~~  119 (444)
                      ++..++.|+. ...+.+||+.+  .+....-..+ .......+...++.+++.|+. +         ..+.+||+.+.+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W   98 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW   98 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence            3566666654 35788898863  3333222212 111112223346777777765 2         4688899887654


Q ss_pred             ccccccc-CCCeEEEEEeccCCEEEEeeCC---------------------------------------CeEEEEEcCCc
Q psy8152         120 QWTNFNV-GPQLECMKHNKHSNIIATGGKE---------------------------------------NDLKLWDLNTT  159 (444)
Q Consensus       120 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------~~i~vwd~~~~  159 (444)
                      ....... .......+...++++++.|+.+                                       ..+.+||+.+.
T Consensus        99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~  178 (357)
T 2uvk_A           99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ  178 (357)
T ss_dssp             EECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred             EECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence            3211101 1111111122467788888754                                       57888998875


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccce-eEEEEecCCCEEEEEeC------CceEEEEEcC-CCCCccceEEEeCC
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV-NGISFLPNSDKVAVCSK------QGYVRVYDPK-ITTQRRPVLKVDIP  231 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~------d~~i~i~d~~-~~~~~~~~~~~~~~  231 (444)
                      +-...-.....                 ... .+++.. ++++++.|+.      ...+.+|++. .+.....+..+...
T Consensus       179 ~W~~~~~~p~~-----------------~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~  240 (357)
T 2uvk_A          179 QWSYAGESPWY-----------------GTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSP  240 (357)
T ss_dssp             EEEEEEECSSC-----------------CCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTT
T ss_pred             cEEECCCCCCC-----------------CcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCC
Confidence            43322111100                 011 233332 4566666654      2357778762 01222222222111


Q ss_pred             CCCeeEEEEccCCCEEEEEcCC----------------------CcEEEEEcCCCCc--ceeEeccccCceeEEEecCCC
Q psy8152         232 DVALSCITTTNQSHYVIVGSTT----------------------GDMMAVDLRGKGK--PCYKYKGFAGCVKDIACPLNE  287 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~~~~d----------------------g~i~iwd~~~~~~--~~~~~~~h~~~i~~~~~s~~~  287 (444)
                      .......+...++++++.|+.+                      ..+.+||+.+ .+  .+..++.....-.++.  .++
T Consensus       241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~--~~~  317 (357)
T 2uvk_A          241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN-GKWDKSGELSQGRAYGVSLP--WNN  317 (357)
T ss_dssp             TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSCCBSSEEEE--ETT
T ss_pred             cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC-CceeeCCCCCCCcccceeEE--eCC
Confidence            1111211223356777777632                      2477899876 43  2333332222212222  366


Q ss_pred             CEEEEEECCC------cEEEEEcCCCceEEE
Q psy8152         288 NLILSVSLDR------HFRVHDFHSKKLLRK  312 (444)
Q Consensus       288 ~~l~s~~~dg------~i~vw~~~~~~~~~~  312 (444)
                      ++++.|+.++      .|.++++.+++.+..
T Consensus       318 ~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~  348 (357)
T 2uvk_A          318 SLLIIGGETAGGKAVTDSVLITVKDNKVTVQ  348 (357)
T ss_dssp             EEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred             EEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence            7777887543      355668877776554

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.69  E-value=0.035  Score=51.89  Aligned_cols=237  Identities=9%  Similarity=0.055  Sum_probs=130.0

Q ss_pred             EEEEEcCCeEEEEeCCCCccccceeecc-------------------------c--cccEEEE---EeCCCeEEEEec-C
Q psy8152          58 LLIAYSGQKIKIYDTDFKNFNTNTDVSF-------------------------G--EGDIVGV---SRYDECILTAVK-S  106 (444)
Q Consensus        58 l~~~~~d~~i~vw~~~~~~~~~~~~~~~-------------------------~--~~~v~~~---s~~~~~l~~~~~-d  106 (444)
                      |.+|+..|.|+|+-+.+++.+..+....                         .  ..+-.++   ..+|++|+.-.. +
T Consensus        73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan  152 (638)
T 3sbq_A           73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN  152 (638)
T ss_dssp             EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence            5678889999999998887666552100                         0  1111222   246788887664 5


Q ss_pred             CcEEEEEcCCCCccc-cccccCCCeEEEEEe--ccCCEEEEeeCC-------CeEEEEEcCCceeeeeeecccceeeEee
Q psy8152         107 GDVKLWRYKTEPDQW-TNFNVGPQLECMKHN--KHSNIIATGGKE-------NDLKLWDLNTTKNIFSAKNVSHRVLVYS  176 (444)
Q Consensus       107 g~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~--~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~  176 (444)
                      ..|...++...++-. ........+..++|.  |+..+++.++..       |..  ..+...+...         ...+
T Consensus       153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~---------~f~~  221 (638)
T 3sbq_A          153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYT---------MYNA  221 (638)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEE---------EEEE
T ss_pred             cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhce---------EEEE
Confidence            668888888777654 233466778899886  677788877752       221  0001100000         1111


Q ss_pred             eCCCcccccCc----cceeEEEEecCCCEEEEEeCCc---------------eEEEEEcCC-----------CC------
Q psy8152         177 VKPDEFDLRRP----VWVNGISFLPNSDKVAVCSKQG---------------YVRVYDPKI-----------TT------  220 (444)
Q Consensus       177 ~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~d~---------------~i~i~d~~~-----------~~------  220 (444)
                      +.++.+....+    ...-.+...+++++.++.+.+.               .+.++++..           ..      
T Consensus       222 iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~  301 (638)
T 3sbq_A          222 IDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTP  301 (638)
T ss_dssp             EETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCC
T ss_pred             EcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCee
Confidence            12221111100    0122334455555655544321               344444320           00      


Q ss_pred             -----C----c-cceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-----Ccc-------eeEeccccCc
Q psy8152         221 -----Q----R-RPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-----GKP-------CYKYKGFAGC  277 (444)
Q Consensus       221 -----~----~-~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-----~~~-------~~~~~~h~~~  277 (444)
                           .    . ..++.+. -......+.++|+|+++++ |-.+.++.++++...     .+.       ..... -.-.
T Consensus       302 ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlG  379 (638)
T 3sbq_A          302 VLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLG  379 (638)
T ss_dssp             EEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSC
T ss_pred             EEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCc
Confidence                 1    1 1122222 2233467889999999887 456788999998740     111       12222 2234


Q ss_pred             eeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         278 VKDIACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      ....+|.++|....|.--|..|.-|++...
T Consensus       380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~a  409 (638)
T 3sbq_A          380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEEA  409 (638)
T ss_dssp             EEEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred             ccEEEECCCCceEeeeeecceEEEEeccHH
Confidence            567899999965556668999999999753

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.66  E-value=0.032  Score=50.56  Aligned_cols=235  Identities=8%  Similarity=0.104  Sum_probs=147.2

Q ss_pred             CcEEEEEE---cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE
Q psy8152          55 ESELLIAY---SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE  131 (444)
Q Consensus        55 ~~~l~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~  131 (444)
                      .+++.+--   ....|.|.|+..+........   .....-++|..+.||.-. ..++.|+|+.+.+.+. .......|.
T Consensus        35 DkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klk-s~~~~e~Vv  109 (494)
T 1bpo_A           35 DKFICIREKVGEQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHTMTDDVT  109 (494)
T ss_dssp             TTEEEEEECCTTCCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEE-EEECSSCCC
T ss_pred             CceEEEEecCCCCCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhc-ceecCCCce
Confidence            45555432   234799999987665543321   222233478777777665 6799999999988775 333455666


Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe----
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS----  206 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----  206 (444)
                      -=.|-. .+.|+..+ +..|+-|++.. ..+...+..|..             + ....|.....+++.++++..+    
T Consensus       110 fWkWis-~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~-------------L-~~~QIInY~~d~~~kW~~l~GI~~~  173 (494)
T 1bpo_A          110 FWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSS-------------L-AGCQIINYRTDAKQKWLLLTGISAQ  173 (494)
T ss_dssp             EEEEEE-TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGG-------------G-TTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred             EEEecC-CCeEEEEc-CCeeEEecccCCCCchhheecchh-------------c-ccceEEEEEECCCCCeEEEEeeccc
Confidence            667763 44565555 36899999975 345545544433             0 123577777788887776443    


Q ss_pred             ---CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC---CCEEEEEcC---CCcEEEEEcCCC--Cccee-----E
Q psy8152         207 ---KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ---SHYVIVGST---TGDMMAVDLRGK--GKPCY-----K  270 (444)
Q Consensus       207 ---~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---dg~i~iwd~~~~--~~~~~-----~  270 (444)
                         ..|.+.+|...    .+.-+.+.+|......+.+.-+   ..+++.+..   .+.++|.++..+  +.+..     .
T Consensus       174 ~~~v~G~mQLYS~e----r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vd  249 (494)
T 1bpo_A          174 QNRVVGAMQLYSVD----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVD  249 (494)
T ss_dssp             TTEEEEEEEEEEST----TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEE
T ss_pred             CCcccceEEEeecc----ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeee
Confidence               25789999988    5556667787655444433211   123333333   378999998652  11111     1


Q ss_pred             e--c--cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         271 Y--K--GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       271 ~--~--~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +  +  .......++..++.-..++.-+.-|.|++||+.++.++..-.
T Consensus       250 v~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr  297 (494)
T 1bpo_A          250 VFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR  297 (494)
T ss_dssp             CCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             eeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence            1  1  113344578888888889999999999999999999987654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.65  E-value=0.014  Score=52.67  Aligned_cols=242  Identities=9%  Similarity=0.006  Sum_probs=115.1

Q ss_pred             CcccEEEecC-CCcEEEEEcCCCccceeeeeeecccC-cccceEEEeeeccCCcEEEEEEc-C---------CeEEEEeC
Q psy8152           5 DDYNIYIGSS-TGAFKGVNLSKDKCIIKNIQNVKYIT-NKASVLALNWGNVEESELLIAYS-G---------QKIKIYDT   72 (444)
Q Consensus         5 ~~~~l~~g~~-dg~i~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~~~~~-d---------~~i~vw~~   72 (444)
                      ++.+++.|+. ...+.+|++......   +..+..+. ....-.+++..  ++..++.|+. +         ..+.+||+
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~---W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~   93 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKK---WTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNP   93 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCC---EEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCC---eeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence            3445555543 456778887642211   22222221 11111223333  3666666665 2         46889998


Q ss_pred             CCCccccceeec-cccccEEEEEeCCCeEEEEecC---------------------------------------CcEEEE
Q psy8152          73 DFKNFNTNTDVS-FGEGDIVGVSRYDECILTAVKS---------------------------------------GDVKLW  112 (444)
Q Consensus        73 ~~~~~~~~~~~~-~~~~~v~~~s~~~~~l~~~~~d---------------------------------------g~i~iw  112 (444)
                      .+.+....-... .......++..++++++.|+.+                                       ..+.+|
T Consensus        94 ~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y  173 (357)
T 2uvk_A           94 KTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF  173 (357)
T ss_dssp             TTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred             CCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence            876654432221 1122223334677788888754                                       468889


Q ss_pred             EcCCCCccccc-cccCCCe-EEEEEeccCCEEEEeeC------CCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcc
Q psy8152         113 RYKTEPDQWTN-FNVGPQL-ECMKHNKHSNIIATGGK------ENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEF  182 (444)
Q Consensus       113 ~~~~~~~~~~~-~~~~~~v-~~~~~~~~~~~l~~~~~------d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (444)
                      |+.+.+..... ....... .+++.. ++.+++.|+.      ...+.+|++  .+.+-.. +.....        |   
T Consensus       174 d~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~--------~---  240 (357)
T 2uvk_A          174 DPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSS--------P---  240 (357)
T ss_dssp             ETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSST--------T---
T ss_pred             eCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCC--------C---
Confidence            98776543211 1111111 222222 5667777764      234666776  3322111 111000        0   


Q ss_pred             cccCccceeEEEEecCCCEEEEEeCC----------------------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEE
Q psy8152         183 DLRRPVWVNGISFLPNSDKVAVCSKQ----------------------GYVRVYDPKITTQRRPVLKVDIPDVALSCITT  240 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~~~l~~~~~d----------------------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~  240 (444)
                          .......+...++++++.|+.+                      ..+.+||+. ......+..+......-.++  
T Consensus       241 ----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~--  313 (357)
T 2uvk_A          241 ----DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH-NGKWDKSGELSQGRAYGVSL--  313 (357)
T ss_dssp             ----TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSCCBSSEEE--
T ss_pred             ----cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC-CCceeeCCCCCCCcccceeE--
Confidence                0011111223356777777632                      257889988 44555554444332222222  


Q ss_pred             ccCCCEEEEEcCCC------cEEEEEcCCCCcceeEec
Q psy8152         241 TNQSHYVIVGSTTG------DMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       241 ~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~  272 (444)
                      ..++++++.|+.++      .|.+++++. ++.+...+
T Consensus       314 ~~~~~i~v~GG~~~~~~~~~~v~~l~~~~-~~~~~~~~  350 (357)
T 2uvk_A          314 PWNNSLLIIGGETAGGKAVTDSVLITVKD-NKVTVQNL  350 (357)
T ss_dssp             EETTEEEEEEEECGGGCEEEEEEEEEC-C-CSCEEEC-
T ss_pred             EeCCEEEEEeeeCCCCCEeeeEEEEEEcC-cEeEeeec
Confidence            33677888887553      356668877 66554433

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.59  E-value=0.0067  Score=53.70  Aligned_cols=224  Identities=14%  Similarity=0.085  Sum_probs=107.3

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeecc--ccccEEEEEeCCCeEEEEec----CC-------cEEEEEcCCCCccccc
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSF--GEGDIVGVSRYDECILTAVK----SG-------DVKLWRYKTEPDQWTN  123 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~s~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~~~  123 (444)
                      .++.|+.  .+.+||..+.+... .....  .......+..++.+++.|+.    ++       .+.+||..+.+... +
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~   93 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-L   93 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-C
T ss_pred             hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-C
Confidence            3444443  48889988777644 22211  11122233456777788873    11       16778877665432 1


Q ss_pred             cccCCC--eEEEEEeccCCEEEEeeCC-------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         124 FNVGPQ--LECMKHNKHSNIIATGGKE-------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       124 ~~~~~~--v~~~~~~~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      .....+  -.+++.. ++.+++.|+.+       ..+.+||+.+.+-...-.....                 ..-.+++
T Consensus        94 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-----------------r~~~~~~  155 (318)
T 2woz_A           94 PPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-----------------VYGHNVI  155 (318)
T ss_dssp             SCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-----------------EESCEEE
T ss_pred             CCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-----------------ccccEEE
Confidence            111111  1122222 66777777754       3477888876543221110000                 0011222


Q ss_pred             EecCCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152         195 FLPNSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG  263 (444)
Q Consensus       195 ~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  263 (444)
                      . .++++++.|+.      -..+.+||+. +.....+..+...... .+++. -++++++.|+.+     ..+.+||+.+
T Consensus       156 ~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~  231 (318)
T 2woz_A          156 S-HNGMIYCLGGKTDDKKCTNRVFIYNPK-KGDWKDLAPMKTPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKT  231 (318)
T ss_dssp             E-ETTEEEEECCEESSSCBCCCEEEEETT-TTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred             E-ECCEEEEEcCCCCCCCccceEEEEcCC-CCEEEECCCCCCCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCC
Confidence            2 35667777764      2358899988 2233333222211111 22222 256777777643     3477889876


Q ss_pred             CCcc--eeEeccccCceeEEEecCCCCEEEEEECC--------------CcEEEEEcCCCce
Q psy8152         264 KGKP--CYKYKGFAGCVKDIACPLNENLILSVSLD--------------RHFRVHDFHSKKL  309 (444)
Q Consensus       264 ~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~d--------------g~i~vw~~~~~~~  309 (444)
                       .+-  +..++........+.  .++++++.|+.+              ..+.+||+.+.+-
T Consensus       232 -~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W  290 (318)
T 2woz_A          232 -NKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW  290 (318)
T ss_dssp             -CCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred             -CeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence             431  112221111112222  245666666653              3477777776543

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.53  E-value=0.029  Score=50.17  Aligned_cols=193  Identities=13%  Similarity=0.148  Sum_probs=104.5

Q ss_pred             eEEEeeeccCCcEEEEEE-------------cCCeEEEEeCCC--Cccccceeecc-----ccccEEEEE--e--CCC-e
Q psy8152          45 VLALNWGNVEESELLIAY-------------SGQKIKIYDTDF--KNFNTNTDVSF-----GEGDIVGVS--R--YDE-C   99 (444)
Q Consensus        45 v~~~~~~~~~~~~l~~~~-------------~d~~i~vw~~~~--~~~~~~~~~~~-----~~~~v~~~s--~--~~~-~   99 (444)
                      .-.+... +++ ++++++             .+|.|.++|..+  ++. ..+...+     .......++  +  ++. +
T Consensus        52 ~EDi~~~-~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~  128 (355)
T 3sre_A           52 SEDLEIL-PNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVY  128 (355)
T ss_dssp             CCEEEEC-TTS-EEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred             cceeEEc-CCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence            4556667 555 444444             689999999873  222 2233222     122334443  3  344 3


Q ss_pred             EEEEe-c--CCcEEEEEcCCCCcccccc----c-cCCCeEEEEEeccCCEEEEeeC-----------------CCeEEEE
Q psy8152         100 ILTAV-K--SGDVKLWRYKTEPDQWTNF----N-VGPQLECMKHNKHSNIIATGGK-----------------ENDLKLW  154 (444)
Q Consensus       100 l~~~~-~--dg~i~iw~~~~~~~~~~~~----~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~vw  154 (444)
                      |+++. .  ..+|.+|++........+.    + .-...+.+++.++|.+.++...                 .|.|..+
T Consensus       129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~  208 (355)
T 3sre_A          129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY  208 (355)
T ss_dssp             EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred             EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence            44442 2  4678888876542221111    1 1235788999999887776531                 2334444


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDV  233 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~  233 (444)
                      +.  ++.........                   ..+.++|+|+++.|+++ +..+.|+.|++...+.......+. ...
T Consensus       209 d~--~~~~~~~~~l~-------------------~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g  266 (355)
T 3sre_A          209 SP--NDVRVVAEGFD-------------------FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDT  266 (355)
T ss_dssp             CT--TCCEEEEEEES-------------------SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS
T ss_pred             EC--CeEEEeecCCc-------------------ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCC
Confidence            43  22211111111                   37899999999776655 567899999987212222222332 235


Q ss_pred             CeeEEEEcc-CCCEEEEEcCC-CcEEEEEcC
Q psy8152         234 ALSCITTTN-QSHYVIVGSTT-GDMMAVDLR  262 (444)
Q Consensus       234 ~i~~~~~~~-~~~~l~~~~~d-g~i~iwd~~  262 (444)
                      ..-.+++.+ +|++.+++..+ +.|..|+..
T Consensus       267 ~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~  297 (355)
T 3sre_A          267 LVDNISVDPVTGDLWVGCHPNGMRIFFYDAE  297 (355)
T ss_dssp             EEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred             CCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence            567889998 58877765433 344444443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.42  E-value=0.03  Score=50.60  Aligned_cols=146  Identities=9%  Similarity=0.059  Sum_probs=91.9

Q ss_pred             cCCEEEEeeCCCeEEEEEcCCceeeeeeeccc--ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEE
Q psy8152         138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVS--HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD  215 (444)
Q Consensus       138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  215 (444)
                      ++..++.+- ++.||.-++......+.++...  .                -..|..+..+|+|++||..+. ..|.|..
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~----------------f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~   92 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLV----------------LDDTFHVISSTSGDLLCLFND-NEIFVME   92 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCC----------------CCTTCEEEECTTSSEEEEECS-SEEEEEE
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccc----------------cCceeEEEECCCCCEEEEecC-CeEEEEE
Confidence            555555544 3677877776433233332221  1                013788999999999998754 5888888


Q ss_pred             cCCCC---C------ccceEEEeC------CCCCeeEEEEccC---CCEEEEEcCCCcEEEEEcCCC-CcceeEec----
Q psy8152         216 PKITT---Q------RRPVLKVDI------PDVALSCITTTNQ---SHYVIVGSTTGDMMAVDLRGK-GKPCYKYK----  272 (444)
Q Consensus       216 ~~~~~---~------~~~~~~~~~------~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~----  272 (444)
                      +....   .      ....+.+..      ...+|..+.|+|-   +..|++-..|+.|++||+... .++. .+.    
T Consensus        93 LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~  171 (452)
T 3pbp_A           93 VPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN  171 (452)
T ss_dssp             CCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS
T ss_pred             ecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc
Confidence            87110   1      011223332      2567999999995   568999999999999999851 2223 332    


Q ss_pred             -----cccCceeEEEecCCCCEEEEEE--CCCcEEEE
Q psy8152         273 -----GFAGCVKDIACPLNENLILSVS--LDRHFRVH  302 (444)
Q Consensus       273 -----~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw  302 (444)
                           .....|.+++|.+++-.|...+  ..|-|+-.
T Consensus       172 ~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          172 SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence                 1225688899988776666644  66777643

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.40  E-value=0.00061  Score=60.39  Aligned_cols=113  Identities=8%  Similarity=-0.029  Sum_probs=74.0

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE-e---CCCeEEEE--ecCCcEEEEEcCCCCccccccc---
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS-R---YDECILTA--VKSGDVKLWRYKTEPDQWTNFN---  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s-~---~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~---  125 (444)
                      +..+++++.||.|+-+|..+|+.+..+... ...+..... +   .+..++.+  +.||.|..++..+|...+.+..   
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l   88 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL   88 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence            568899999999999999999998887643 212333321 1   12234433  5899999999887754331110   


Q ss_pred             -cCCCeEE---EEE-----eccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152         126 -VGPQLEC---MKH-----NKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV  168 (444)
Q Consensus       126 -~~~~v~~---~~~-----~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~  168 (444)
                       ...++..   ...     ...+..+++|+.+|.+...|+.+|+.+..+...
T Consensus        89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~  140 (339)
T 2be1_A           89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG  140 (339)
T ss_dssp             HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred             eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence             1222221   000     003567899999999999999999999888643

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.36  E-value=0.0011  Score=58.68  Aligned_cols=201  Identities=8%  Similarity=0.027  Sum_probs=112.2

Q ss_pred             CeEEEEecCCcEEEEEcCCCCcccccccc-CCCeEEEEEe--c-cCCEEEEe-eCCCeEEEEEcCCceeeeeeeccccee
Q psy8152          98 ECILTAVKSGDVKLWRYKTEPDQWTNFNV-GPQLECMKHN--K-HSNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus        98 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      .++++++.||.|+-+|..+|+.++.+... ..++....-.  + ++..++.. +.||.|..++..+|.....+....-  
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l--   88 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL--   88 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH--
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc--
Confidence            46888999999999999999888755433 1222221111  1 22334443 6899999999988865544432211  


Q ss_pred             eEeeeCCCcccccCccceeE---EEE-----ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC--C-----eeE
Q psy8152         173 LVYSVKPDEFDLRRPVWVNG---ISF-----LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV--A-----LSC  237 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~---~~~-----~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~-----i~~  237 (444)
                        ...+          ++..   ...     ...+..+++|+.++++...|++   +++.+..+.....  .     ..|
T Consensus        89 --v~~S----------P~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~---tG~~~W~~~~~~~~~~~~~~~e~~  153 (339)
T 2be1_A           89 --VSTS----------PLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINML---NGEIISAFGPGSKNGYFGSQSVDC  153 (339)
T ss_dssp             --HTTC----------SEEEECC----------CCEEEEECEEEEEEEEEETT---TCCEEEEESTTCBCC---------
T ss_pred             --eecc----------ccccCCCceeecccccccCCEEEEEecCCEEEEEECC---CCcEEEEEecCCCccccccccccc
Confidence              0000          1110   000     0134678899999999999999   8888887764321  0     011


Q ss_pred             EEEc-----cCCCEEEEEcCCCcEEEEEcCCCCcceeEec-----cccC--ce-eEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         238 ITTT-----NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-----GFAG--CV-KDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       238 ~~~~-----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~h~~--~i-~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      ....     -.+..|+.+..+..+.+.+ ++ ++ +..+.     .+..  ++ .+-..+.++.+ +.++.||.|..+|.
T Consensus       154 ~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~s-G~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~  229 (339)
T 2be1_A          154 SPEEKIKLQECENMIVIGKTIFELGIHS-YD-GA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDL  229 (339)
T ss_dssp             -----------CCEEEEEEEEEECEECC-TT-SC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECS
T ss_pred             ccccccccccCCCeEEEecceEEEEEEC-CC-CC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEEC
Confidence            1111     1235677777777777666 44 53 33222     1000  00 00011234555 45788999999999


Q ss_pred             CCCceEE-EeecCCce
Q psy8152         305 HSKKLLR-KDYMQSRL  319 (444)
Q Consensus       305 ~~~~~~~-~~~~~~~i  319 (444)
                      .+|+.+. +.....++
T Consensus       230 ~~G~~~W~~~~l~sPv  245 (339)
T 2be1_A          230 DFRIARWVSPTFPGII  245 (339)
T ss_dssp             TTCCEEEECCCCSSCE
T ss_pred             CCCcEEEEeecCCCCe
Confidence            9988877 44455554

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.32  E-value=0.084  Score=47.38  Aligned_cols=60  Identities=17%  Similarity=0.173  Sum_probs=41.1

Q ss_pred             CCeeEEEEcc-------CCCEEEEEcCCCcEEEEEcCCCCcceeE--e-ccccCceeEEEecCCCCEEEEE
Q psy8152         233 VALSCITTTN-------QSHYVIVGSTTGDMMAVDLRGKGKPCYK--Y-KGFAGCVKDIACPLNENLILSV  293 (444)
Q Consensus       233 ~~i~~~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~-~~h~~~i~~~~~s~~~~~l~s~  293 (444)
                      ..+..++|.+       +++++++....+.|...++.. ++.+..  + ......+..+++.|+|.++++.
T Consensus       271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t  340 (353)
T 2g8s_A          271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG-DKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT  340 (353)
T ss_dssp             CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET-TEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred             cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC-CeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence            3467788863       577888877788888888876 654432  2 2223578899999999866543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.31  E-value=0.034  Score=45.41  Aligned_cols=181  Identities=8%  Similarity=-0.107  Sum_probs=93.7

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCc-c----cccccc--CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152          97 DECILTAVKSGDVKLWRYKTEPD-Q----WTNFNV--GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus        97 ~~~l~~~~~dg~i~iw~~~~~~~-~----~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      ..+|+....| +|+.=....+.. .    .+..+.  -..+..++|+|++.+.++  .+|.+.-.+..+.... .+....
T Consensus         4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~   79 (236)
T 1tl2_A            4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRA   79 (236)
T ss_dssp             CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHC
T ss_pred             ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccc
Confidence            3456666666 555544443331 0    012223  246789999998886666  6677666665442211 000001


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc----eEEEeCCCCCeeEEEEccCCC
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP----VLKVDIPDVALSCITTTNQSH  245 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~  245 (444)
                      ..+-..         ... .-.++.|.|+|.+.++  .||.|+-++..++....-    ...-...-..+..|.|.|+|.
T Consensus        80 t~IG~~---------Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~  147 (236)
T 1tl2_A           80 KKIGNG---------GWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY  147 (236)
T ss_dssp             EEEECS---------CGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC
T ss_pred             cEeccc---------ccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce
Confidence            100000         000 1378899999988877  558888777641111110    111111224578999999998


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcc-----eeEe-c-cccCceeEEEecCCCCEEEEEECCCc
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKP-----CYKY-K-GFAGCVKDIACPLNENLILSVSLDRH  298 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~-----~~~~-~-~h~~~i~~~~~s~~~~~l~s~~~dg~  298 (444)
                      +.++.  ++.++-+...+ ...     ..+. - .....-+.+.|.+++.+.++.  ++.
T Consensus       148 Lyav~--dg~lyr~~~P~-~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~  202 (236)
T 1tl2_A          148 LYAVH--GQQFYKALPPV-SNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK  202 (236)
T ss_dssp             EEEEE--TTEEEEECCCS-STTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred             EEEEe--CCcEEecCCCC-CCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence            77666  77754433222 110     1111 1 222234456788888766665  663

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.19  E-value=0.12  Score=46.42  Aligned_cols=230  Identities=13%  Similarity=0.099  Sum_probs=112.0

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccC---CcEEEEEEc----C----CeEEEEeCCC
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVE---ESELLIAYS----G----QKIKIYDTDF   74 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~---~~~l~~~~~----d----~~i~vw~~~~   74 (444)
                      ..|+++...|.|++++. .++   ..+..+... ........|+|+ |+   +..|+++..    +    +.|..|+...
T Consensus        40 G~l~V~e~~g~I~~~d~-~G~---~~~~~~~v~~~g~~g~~gia~~-pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~  114 (354)
T 3a9g_A           40 GRYLVTERPGRLVLISP-SGK---KLVASFDVANVGEAGLLGLALH-PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG  114 (354)
T ss_dssp             TEEEEEETTTEEEEECS-SCE---EEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred             CeEEEEeCCCEEEEEeC-CCc---eEeeccceeecCCCceeeEEeC-CCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence            34677777788888862 332   112222111 223567899999 55   455554433    2    5677777654


Q ss_pred             C--cc---ccc---ee-eccccccEEEEEeCCCeEEEEec-------------CCcEEEEEcCCCC-------cccc-cc
Q psy8152          75 K--NF---NTN---TD-VSFGEGDIVGVSRYDECILTAVK-------------SGDVKLWRYKTEP-------DQWT-NF  124 (444)
Q Consensus        75 ~--~~---~~~---~~-~~~~~~~v~~~s~~~~~l~~~~~-------------dg~i~iw~~~~~~-------~~~~-~~  124 (444)
                      .  ..   ...   +. ...|...-+.|.|+|.++++.+.             .|.|.-++....-       .... ..
T Consensus       115 ~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~  194 (354)
T 3a9g_A          115 STFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSY  194 (354)
T ss_dssp             SSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE
T ss_pred             CCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE
Confidence            3  11   111   11 11344555778899987666432             1345555443210       0001 11


Q ss_pred             ccCCCeEEEEEec-cCCEEEEeeCCC---eEEEEEcCCcee----eeeeecccceeeEeeeCCCcccc-cCccceeEEEE
Q psy8152         125 NVGPQLECMKHNK-HSNIIATGGKEN---DLKLWDLNTTKN----IFSAKNVSHRVLVYSVKPDEFDL-RRPVWVNGISF  195 (444)
Q Consensus       125 ~~~~~v~~~~~~~-~~~~l~~~~~d~---~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~  195 (444)
                      ++ .....++|+| ++.++++-...+   .|.+.  ..+..    ...-.......    ..|. ... .....+..++|
T Consensus       195 G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~----~~p~-~~~~~~~~ap~G~~~  266 (354)
T 3a9g_A          195 GH-RNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKAGRGEF----VDPV-IDTGSETWAPSGASF  266 (354)
T ss_dssp             CC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCCCCTTS----CCCS-EECTTCCCCEEEEEE
T ss_pred             cc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCCCCCCC----cCCE-eecCCCCcCCcceEE
Confidence            22 2356789998 666555433221   12222  21110    00000000000    0000 000 01124677888


Q ss_pred             e-------cCCCEEEEEeCCceEEEEEcCCCCCccc--eEEEe-CCCCCeeEEEEccCCCEEEEEc
Q psy8152         196 L-------PNSDKVAVCSKQGYVRVYDPKITTQRRP--VLKVD-IPDVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       196 ~-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~  251 (444)
                      .       .++.++++....+.|...++.  .....  ...+. .....+..+++.|+|.+.++..
T Consensus       267 y~g~~fp~~~G~l~v~~~~~~~v~~~~~~--~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          267 VHGDMFPGLRGWLLIACLRGSMLAAVNFG--DNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CCSSSCGGGTTEEEEEETTTTEEEEEEEC--GGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             ECCCCCcccCCcEEEEEcCCCEEEEEEEC--CCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            3       466777776777889888887  11112  12232 2245688999999997666654

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.13  E-value=0.13  Score=45.87  Aligned_cols=189  Identities=12%  Similarity=0.094  Sum_probs=102.3

Q ss_pred             cCCcEEEEEcCCC--Cccc-cccc-----cCCCeEEEEEec--cCC-EEEEe-eC--CCeEEEEEcCCce-eeeeeeccc
Q psy8152         105 KSGDVKLWRYKTE--PDQW-TNFN-----VGPQLECMKHNK--HSN-IIATG-GK--ENDLKLWDLNTTK-NIFSAKNVS  169 (444)
Q Consensus       105 ~dg~i~iw~~~~~--~~~~-~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~--d~~i~vwd~~~~~-~~~~~~~~~  169 (444)
                      .+|.|.++|+.+.  +... .+.+     .......+.+.+  ++. +|+++ ..  ..+|.+|++.... ....+....
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~  160 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR  160 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence            6889999998743  2221 1111     223566777765  343 33333 22  4567777765532 111111111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-----------------CceEEEEEcCCCCCccceEEEeCCC
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-----------------QGYVRVYDPKITTQRRPVLKVDIPD  232 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~~~~~~  232 (444)
                      +              ..-...+.+.+.++|.++++...                 .|.|..++..   .   +..+...-
T Consensus       161 g--------------~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~---~~~~~~~l  220 (355)
T 3sre_A          161 H--------------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---D---VRVVAEGF  220 (355)
T ss_dssp             C--------------TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT---C---CEEEEEEE
T ss_pred             c--------------CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC---e---EEEeecCC
Confidence            1              00124789999999987776541                 2344444432   2   22222222


Q ss_pred             CCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcc--eeEeccccCceeEEEecC-CCCEEEEEECC-CcEEEEEcC--
Q psy8152         233 VALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPL-NENLILSVSLD-RHFRVHDFH--  305 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~-~~~~l~s~~~d-g~i~vw~~~--  305 (444)
                      ...+.++|+|++++|+.+ +..+.|+.|++...+..  ...+ ...+..-.+++.+ +|++.+++..+ +.|..|+..  
T Consensus       221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~  299 (355)
T 3sre_A          221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENP  299 (355)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSC
T ss_pred             cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCC
Confidence            346889999999877765 45788999998742322  1233 2245567889998 58877766544 344444433  


Q ss_pred             CCceEEEee
Q psy8152         306 SKKLLRKDY  314 (444)
Q Consensus       306 ~~~~~~~~~  314 (444)
                      .+..+.++.
T Consensus       300 ~~s~v~rI~  308 (355)
T 3sre_A          300 PGSEVLRIQ  308 (355)
T ss_dssp             CCEEEEEEE
T ss_pred             CCCEEEEEE
Confidence            234444443

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.06  E-value=0.13  Score=53.86  Aligned_cols=242  Identities=9%  Similarity=0.063  Sum_probs=139.0

Q ss_pred             eeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCC-Ccccccccc-
Q psy8152          50 WGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTE-PDQWTNFNV-  126 (444)
Q Consensus        50 ~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~-  126 (444)
                      .+ |..+.||.-. ..++.|+++.+...++.+..   ...|.-+.| +.+.|+..+ +..|+.|++... .++..+..| 
T Consensus        73 Mn-P~~~iiALra-g~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~  146 (1630)
T 1xi4_A           73 MN-PASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHS  146 (1630)
T ss_pred             cC-CCcceEEEec-CCeEEEeehHHhhhhccccc---CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence            45 5666666654 58999999998888887754   345665555 344454443 358999999642 344333334 


Q ss_pred             ---CCCeEEEEEeccCCEEEEee-------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         127 ---GPQLECMKHNKHSNIIATGG-------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       127 ---~~~v~~~~~~~~~~~l~~~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                         ...|..-..+++.++++..|       -.|.+.+|.+..+. .+.+.+|......+.+...    ..+..+.|.+.-
T Consensus       147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~----~~~~~l~~f~~~  221 (1630)
T 1xi4_A          147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGN----AEESTLFCFAVR  221 (1630)
T ss_pred             hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCC----CCCceEEEEEEe
Confidence               45677778888888877544       34788888887532 2334444442211111110    011123333322


Q ss_pred             cCCCEEEEEeCCceEEEEEcCCCCCccceE------EEeC---CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc
Q psy8152         197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVL------KVDI---PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP  267 (444)
Q Consensus       197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  267 (444)
                      .        ...+.++|.++.....+.+..      .+..   ......++..++.-..++.-+.-|.|++||+.+ +.+
T Consensus       222 ~--------~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t-~~~  292 (1630)
T 1xi4_A          222 G--------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET-GTC  292 (1630)
T ss_pred             c--------CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc-chh
Confidence            1        012688898886210111111      1111   122334677788777888889999999999999 988


Q ss_pred             eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE
Q psy8152         268 CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR  311 (444)
Q Consensus       268 ~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~  311 (444)
                      +..-+-...+|...+-+....-+++....|.|.--.+....++.
T Consensus       293 i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~  336 (1630)
T 1xi4_A          293 IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP  336 (1630)
T ss_pred             hhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence            87655444445444444333334444567766666666555444

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.04  E-value=0.32  Score=48.72  Aligned_cols=260  Identities=11%  Similarity=0.058  Sum_probs=139.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ....|..|+.+| |..||-..-    ..+..... .....|.++... . ...|..|+.+ -+..||..+.+......  
T Consensus        31 ~~G~lWigT~~G-L~ryDG~~~----~~~~~~~~-~~~~~i~~i~~d-~-~g~lWigT~~-Gl~~yd~~~~~f~~~~~--   99 (758)
T 3ott_A           31 SEGLIWIGSNKG-LFSYDGYST----QQHFTYGE-NNNTRIYCGVII-D-NTYLYMGTDN-GILVYNYRADRYEQPET--   99 (758)
T ss_dssp             TTSCEEEEESSC-EEEECSSCE----EECSCTTS-TTSSCEEEEEEE-T-TTEEEEEETT-EEEEEETTTTEECCCSC--
T ss_pred             CCCCEEEEECCC-ccccCCCce----EEEEccCC-CCCceEEEEEEc-C-CCcEEEEeCC-CeEEEeCCCCEEECccc--
Confidence            345677777666 344542111    11111111 124568888776 3 4567777765 47899987765443111  


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc-----ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF-----NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT  159 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~  159 (444)
                      .....|.++......|..++.+ -|..++..+++... +.     .....|.++...+++.+.+ |+.. -|..++..++
T Consensus       100 ~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~  175 (758)
T 3ott_A          100 DFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS-FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNG  175 (758)
T ss_dssp             CCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE-ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTT
T ss_pred             CCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE-eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCC
Confidence            1123455554334456666665 67888887665432 20     1234588888777666554 4444 4777887765


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT  239 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~  239 (444)
                      +... +.....           . ......|.++...+++..|..|+. +-|..++.. .........+  ....|.++.
T Consensus       176 ~~~~-~~~~~~-----------~-~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~-~~~~~~~~~l--~~~~i~~i~  238 (758)
T 3ott_A          176 KFEG-IPLPVH-----------S-SQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPS-TGQIKQTEAF--HNNSIKSLA  238 (758)
T ss_dssp             EEEE-ECCCCC-----------T-TCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETT-TTEEEEEEEE--EEEEEEEEE
T ss_pred             ceEE-ecCCCc-----------c-ccccceeEEEEEECCCCEEEEEEC-CCCeEEcCC-CCeEEeccCC--CCCeEEEEE
Confidence            4321 111000           0 000124788888777665555554 468888876 1111122222  233578888


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--------ccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--------FAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      ..++|.+.+ |+.. -+.+++..+ ... ..+..        ....|.++....+|.+-+ |+..| +.++
T Consensus       239 ~d~~g~lWi-gT~~-Gl~~~~~~~-~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~  303 (758)
T 3ott_A          239 LDGNGDLLA-GTDN-GLYVYHNDT-TPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLS  303 (758)
T ss_dssp             ECTTCCEEE-EETT-EEEEECCTT-SCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEE
T ss_pred             EcCCCCEEE-EeCC-ceeEEecCC-CcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-cccc
Confidence            887776655 4444 478888765 432 22221        124588888877776443 44556 5444

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.95  E-value=0.074  Score=52.61  Aligned_cols=196  Identities=12%  Similarity=0.110  Sum_probs=101.5

Q ss_pred             CCcEEEEEEcC----CeEEEEeCCCCccccce-e-----eccccccEEEEEe--CCCeEEEEecC------CcEEEEEcC
Q psy8152          54 EESELLIAYSG----QKIKIYDTDFKNFNTNT-D-----VSFGEGDIVGVSR--YDECILTAVKS------GDVKLWRYK  115 (444)
Q Consensus        54 ~~~~l~~~~~d----~~i~vw~~~~~~~~~~~-~-----~~~~~~~v~~~s~--~~~~l~~~~~d------g~i~iw~~~  115 (444)
                      ++..++.|+.+    ..+.+||..+++....- .     .+.......+...  ++.+++.|+.+      ..+.+||+.
T Consensus       397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~  476 (695)
T 2zwa_A          397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK  476 (695)
T ss_dssp             SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred             CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence            46677777653    46888998877654432 1     1111111222333  77777777754      357888887


Q ss_pred             CCCccccc-cccCCCeEEEEEeccCCEEEEeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152         116 TEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG  192 (444)
Q Consensus       116 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (444)
                      +.+....- ......-.+++...++.+++.|+.++  .+.+||+.+..-...-. ...       .|     .......+
T Consensus       477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~g~-------~p-----~~r~~~~a  543 (695)
T 2zwa_A          477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP-KDE-------FF-----QNSLVSAG  543 (695)
T ss_dssp             TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC-SSG-------GG-----GSCCBSCE
T ss_pred             CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC-CCC-------CC-----CcccceeE
Confidence            75433210 11111112233324788888888654  68899988755322111 000       00     00112233


Q ss_pred             EEEecC-CCEEEEEeC--C-----ceEEEEEcCCCCC------ccceEEEeCCCCCeeEEEEccCCCEEEEEcC------
Q psy8152         193 ISFLPN-SDKVAVCSK--Q-----GYVRVYDPKITTQ------RRPVLKVDIPDVALSCITTTNQSHYVIVGST------  252 (444)
Q Consensus       193 ~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------  252 (444)
                      +.+... +++++.|+.  +     ..+.+||+. ...      ...+.........-.+++...++++++.|+.      
T Consensus       544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~-~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~  622 (695)
T 2zwa_A          544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD-AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLF  622 (695)
T ss_dssp             EEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC-TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCC
T ss_pred             EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc-CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCC
Confidence            555555 567777765  2     468899998 222      1222221111111123333333677777774      


Q ss_pred             --CCcEEEEEcCC
Q psy8152         253 --TGDMMAVDLRG  263 (444)
Q Consensus       253 --dg~i~iwd~~~  263 (444)
                        ...|.+||+.+
T Consensus       623 ~~~~~v~~yd~~t  635 (695)
T 2zwa_A          623 DRTNSIISLDPLS  635 (695)
T ss_dssp             CTTTSEEEEETTT
T ss_pred             CCCCeEEEEECCC
Confidence              34689999987

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.90  E-value=0.19  Score=43.88  Aligned_cols=182  Identities=6%  Similarity=-0.026  Sum_probs=101.6

Q ss_pred             EeeeccCCcEEEEEEcC--------------CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe--cC--CcE
Q psy8152          48 LNWGNVEESELLIAYSG--------------QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV--KS--GDV  109 (444)
Q Consensus        48 ~~~~~~~~~~l~~~~~d--------------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~--~d--g~i  109 (444)
                      --++ +++++|+-+...              ..|+..++..++.....     ......+++++++|+-..  .+  ..|
T Consensus        58 ~~i~-~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~-----~~~~~~~s~~g~~Iy~~~~~~~~~~~I  131 (302)
T 3s25_A           58 MYIN-ADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD-----PDPCIYASLIGNYIYYLHYDTQTATSL  131 (302)
T ss_dssp             EEEE-ECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE-----CSCEEEEEEETTEEEEEEESSSSCEEE
T ss_pred             eeEE-EcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee-----cCCccEEEEeCCEEEEEeecCCCCceE
Confidence            3456 678888876543              35777777766533322     234457888999888775  33  445


Q ss_pred             EEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152         110 KLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       110 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      ...++...... .+..+..    .+|+++++.|+-.+. ...|.+.++..+.....+.   .                  
T Consensus       132 y~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~------------------  185 (302)
T 3s25_A          132 YRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---C------------------  185 (302)
T ss_dssp             EEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---S------------------
T ss_pred             EEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---C------------------
Confidence            55556543333 2433332    456777777776554 5678888877654332222   1                  


Q ss_pred             ceeEEEEecCCCEEEEEeCC--ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc--CCCcEEEEEcCCC
Q psy8152         189 WVNGISFLPNSDKVAVCSKQ--GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS--TTGDMMAVDLRGK  264 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~  264 (444)
                      ... ..++|++.+|+-....  ..|..-++.    +.....+.  ...+  ..|+|.+.+|+-+.  ..+.|..-++.  
T Consensus       186 ~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld----G~~~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D--  254 (302)
T 3s25_A          186 NCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN----NPNPVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND--  254 (302)
T ss_dssp             CEE-EEEEEETTEEEEEEGGGTTEEEEECSS----SCCCEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT--
T ss_pred             Ccc-ceeeecCCEEEEEEcCCCcEEEEEECC----CCCeEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC--
Confidence            121 2356888888766543  356555665    11222222  2223  34788888887653  23566666665  


Q ss_pred             CcceeEec
Q psy8152         265 GKPCYKYK  272 (444)
Q Consensus       265 ~~~~~~~~  272 (444)
                      +...+++.
T Consensus       255 G~~r~~l~  262 (302)
T 3s25_A          255 GTGFKELA  262 (302)
T ss_dssp             SCCCEEEE
T ss_pred             CCccEEee
Confidence            44344443

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=96.88  E-value=0.43  Score=47.75  Aligned_cols=257  Identities=9%  Similarity=0.070  Sum_probs=138.4

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee--
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV--   83 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~--   83 (444)
                      +..|.+|+..| |..|+..+.+.     ..... .....|.++...   ...|..++.+ .|..|+..+++.......  
T Consensus        73 ~g~lWigT~~G-l~~yd~~~~~f-----~~~~~-~~~~~i~~i~~~---~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~  141 (758)
T 3ott_A           73 NTYLYMGTDNG-ILVYNYRADRY-----EQPET-DFPTDVRTMALQ---GDTLWLGALN-GLYTYQLQSRKLTSFDTRRN  141 (758)
T ss_dssp             TTEEEEEETTE-EEEEETTTTEE-----CCCSC-CCCSCEEEEEEE---TTEEEEEETT-EEEEEETTTCCEEEECHHHH
T ss_pred             CCcEEEEeCCC-eEEEeCCCCEE-----ECccc-CCCceEEEEEec---CCcEEEEcCC-cceeEeCCCCeEEEeccCCC
Confidence            45677887665 67888776552     11110 123457777543   3456667665 688888876554321000  


Q ss_pred             ccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccc-----cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFN-----VGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      ......|.++..+ ...|..++.. -|..++..+++.......     ....|.++...+++..|..|+. +-|..++..
T Consensus       142 ~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~  219 (758)
T 3ott_A          142 GLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPS  219 (758)
T ss_dssp             CCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETT
T ss_pred             CcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCC
Confidence            0113457777554 3345556554 477788766543211111     1234788887776666666664 458888887


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--------
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--------  229 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------  229 (444)
                      +++..........                  .|.++...+++.+.+ |+.. -+.+++..   ... +..+.        
T Consensus       220 ~~~~~~~~~l~~~------------------~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~---~~~-~~~~~~~~~~~~~  275 (758)
T 3ott_A          220 TGQIKQTEAFHNN------------------SIKSLALDGNGDLLA-GTDN-GLYVYHND---TTP-LQHIIHDSRNIQS  275 (758)
T ss_dssp             TTEEEEEEEEEEE------------------EEEEEEECTTCCEEE-EETT-EEEEECCT---TSC-CEEECCCTTCTTS
T ss_pred             CCeEEeccCCCCC------------------eEEEEEEcCCCCEEE-EeCC-ceeEEecC---CCc-EEEEEcCCCCcCc
Confidence            6543221111111                  488888877776554 4444 47788876   222 22221        


Q ss_pred             CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-------cccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152         230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-------GFAGCVKDIACPLNENLILSVSLDRHFRVH  302 (444)
Q Consensus       230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw  302 (444)
                      .....|.++...++|.+. .|+..| +.++....   ....+.       .....|.++.-..+|.+.+. +..| +..+
T Consensus       276 l~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~~---~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~  348 (758)
T 3ott_A          276 LTNNIIWNIFADQEHNIW-LGTDYG-ISLSRYNS---ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRF  348 (758)
T ss_dssp             CSCSCEEEEEECTTCCEE-EEESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEE
T ss_pred             CCcCeEEEEEEcCCCCEE-EEeCCc-ccccccCC---ceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceee
Confidence            123458888887777654 455556 55543221   111111       11246888877777765543 4444 5555


Q ss_pred             EcCC
Q psy8152         303 DFHS  306 (444)
Q Consensus       303 ~~~~  306 (444)
                      +..+
T Consensus       349 ~~~~  352 (758)
T 3ott_A          349 TDPA  352 (758)
T ss_dssp             SCTT
T ss_pred             cccc
Confidence            5443

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.87  E-value=0.2  Score=43.72  Aligned_cols=207  Identities=9%  Similarity=0.029  Sum_probs=113.0

Q ss_pred             CCcEEEEEEc--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC--------------CcEEEEEcCCC
Q psy8152          54 EESELLIAYS--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS--------------GDVKLWRYKTE  117 (444)
Q Consensus        54 ~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d--------------g~i~iw~~~~~  117 (444)
                      ++..|+....  ++.|+..+..... ...+.    ...+.-|++++..|+-+...              ..|+..++...
T Consensus        24 ~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~----~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~   98 (302)
T 3s25_A           24 SDGEVFFSNTNDNGRLYAMNIDGSN-IHKLS----NDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH   98 (302)
T ss_dssp             ETTEEEEEEGGGTTEEEEEETTSCS-CEEEE----EEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred             eCCEEEEEeCCCCceEEEEcCCCCC-CEEcc----CCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence            4666666542  4666666665333 33332    23356678999988777553              35777777766


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEee--C--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGG--K--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      +... +..  ..  +..|+++++.|+...  .  ...|...++.... ...+..+ .                   +  .
T Consensus        99 ~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~-~-------------------~--~  150 (302)
T 3s25_A           99 GSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNH-Y-------------------L--F  150 (302)
T ss_dssp             CCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESS-C-------------------C--C
T ss_pred             cceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCC-C-------------------c--e
Confidence            5432 222  11  236778888888765  2  3345555554322 2222211 1                   2  3


Q ss_pred             EEecCCCEEEEEeC-CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC--CcEEEEEcCCCCcceeE
Q psy8152         194 SFLPNSDKVAVCSK-QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT--GDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       194 ~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~  270 (444)
                      +++|+++.|+-.+. ...|...++.   .......+.   .... ..++|++.+|+-....  ..|..-++..  .....
T Consensus       151 ~~~~~g~~iy~t~~g~~~Iy~~~l~---g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG--~~~~~  221 (302)
T 3s25_A          151 TCNTSDRYFYYNNPKNGQLYRYDTA---SQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN--PNPVV  221 (302)
T ss_dssp             CSEEETTEEEEECTTTCCEEEEETT---TTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS--CCCEE
T ss_pred             EeeEECCEEEEEeCCCceEEEEECC---CCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC--CCeEE
Confidence            45677877775554 5678888877   222222122   1222 3466888888765433  3566666654  33444


Q ss_pred             eccccCceeEEEecCCCCEEEEEEC--CCcEEEEEcCC
Q psy8152         271 YKGFAGCVKDIACPLNENLILSVSL--DRHFRVHDFHS  306 (444)
Q Consensus       271 ~~~h~~~i~~~~~s~~~~~l~s~~~--dg~i~vw~~~~  306 (444)
                      +..  ..+  ..|+|++.+|+-+..  .+.|..-++..
T Consensus       222 Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG  255 (302)
T 3s25_A          222 LTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG  255 (302)
T ss_dssp             CSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred             EeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence            432  223  347788887776533  35566666654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.77  E-value=0.27  Score=43.72  Aligned_cols=230  Identities=15%  Similarity=0.094  Sum_probs=119.6

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee----ccccccEE--EEEeC---CCeEEEE-e--cCCcE
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV----SFGEGDIV--GVSRY---DECILTA-V--KSGDV  109 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~v~--~~s~~---~~~l~~~-~--~dg~i  109 (444)
                      -...+.|+|. |++.++++-...|.|++++..+++.......    ........  +++|+   +..|... +  ..+.|
T Consensus        31 L~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v  109 (347)
T 3das_A           31 LNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI  109 (347)
T ss_dssp             CSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred             CCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence            3566899999 7888666655489999998665543221111    11123334  44553   3444332 2  34456


Q ss_pred             EEEEcCCCC-----c--ccc-c--c--ccCCCeEEEEEeccCCEEEEeeCC-------------CeEEEEEcCCc-----
Q psy8152         110 KLWRYKTEP-----D--QWT-N--F--NVGPQLECMKHNKHSNIIATGGKE-------------NDLKLWDLNTT-----  159 (444)
Q Consensus       110 ~iw~~~~~~-----~--~~~-~--~--~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~-----  159 (444)
                      .-|.+..+.     .  ... +  .  ........|+|.|++.++++.+..             |.|.-.+....     
T Consensus       110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n  189 (347)
T 3das_A          110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN  189 (347)
T ss_dssp             EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred             EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence            556555421     1  000 1  1  112234579999999877775532             22322232211     


Q ss_pred             ----eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEcCCC---------------
Q psy8152         160 ----KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDPKIT---------------  219 (444)
Q Consensus       160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~---------------  219 (444)
                          ..++. .++.                   ....++|+|++.++++-. .++.=.|.-+...               
T Consensus       190 Pf~~~~i~a-~G~R-------------------Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~  249 (347)
T 3das_A          190 PFPGSPVYS-YGHR-------------------NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGS  249 (347)
T ss_dssp             SSTTCCEEE-BCCS-------------------BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCT
T ss_pred             CCCCCeEEe-eCCC-------------------CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCc
Confidence                00000 1111                   267899999877665432 2322222222200               


Q ss_pred             CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      ....++..+..+......|+|. .+.+++..-..+.|....+.. ...    ...+.+....+..|+..|+|.++++..
T Consensus       250 ~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~-~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          250 GFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKG-TAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             TCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEET-TEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             cccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecC-CceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            1123344444333456677886 466666666667777777765 432    223334456789999999997665543

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.73  E-value=0.29  Score=43.50  Aligned_cols=227  Identities=9%  Similarity=0.007  Sum_probs=112.8

Q ss_pred             ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEecc---CCEEEEe---eCCCeEEEEE
Q psy8152          88 GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKH---SNIIATG---GKENDLKLWD  155 (444)
Q Consensus        88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~vwd  155 (444)
                      ..-+++.|+|.++++--..|.|++++...++...      ...........|+|+|+   +..|+..   ..++.|.-|.
T Consensus        34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~  113 (347)
T 3das_A           34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML  113 (347)
T ss_dssp             EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred             ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence            3445667888877765448999998866554321      11223556889999984   3444432   2345555565


Q ss_pred             cCCceee-eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-------------CceEEEEEcCCCCC
Q psy8152         156 LNTTKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-------------QGYVRVYDPKITTQ  221 (444)
Q Consensus       156 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~  221 (444)
                      +..+... ..+.   ....++.-.|..  ..|  ....|+|.|+|.++++.+.             .|.|.-++..  ..
T Consensus       114 ~~~~~~~~~~~~---~~~~i~~~~p~~--~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d--G~  184 (347)
T 3das_A          114 YDEKKPSGEQLG---APDTVFRGIPKG--VIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD--GE  184 (347)
T ss_dssp             BCTTSCTTCCBC---CCEEEEEEECCC--SSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT--SS
T ss_pred             eCCCCcccccCC---CcEEEEEcCCCC--CCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC--CC
Confidence            5432100 0000   000001101110  011  3567999999987776542             3455555544  11


Q ss_pred             --------ccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCC------------------cceeEeccc
Q psy8152         222 --------RRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKG------------------KPCYKYKGF  274 (444)
Q Consensus       222 --------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~------------------~~~~~~~~h  274 (444)
                              ...+.. .++. ....++|+|+|.+.++- +.++.=.|--+.. +                  .++..+..+
T Consensus       185 ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~~~  261 (347)
T 3das_A          185 PAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWSTD  261 (347)
T ss_dssp             BCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEECTT
T ss_pred             ccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEecCCC
Confidence                    112221 2443 35789999988766652 2333223322222 1                  123333322


Q ss_pred             cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE---EEee--cCCceeEEEEcCC
Q psy8152         275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL---RKDY--MQSRLTSILVRSD  327 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~---~~~~--~~~~i~~~~~~~~  327 (444)
                      ......|+|. .+.+++..-..+.|....+.....+   ..+.  ...++..++..++
T Consensus       262 ~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD  318 (347)
T 3das_A          262 EASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG  318 (347)
T ss_dssp             TCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET
T ss_pred             CCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC
Confidence            2355677775 4555555545556666666544321   1111  2356777776644

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=96.67  E-value=0.27  Score=42.41  Aligned_cols=223  Identities=10%  Similarity=0.022  Sum_probs=118.7

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT  122 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~  122 (444)
                      ..|..|+.. . ...++. . +|.|+.|-....-.+.. .. .....|..++.-..+.+.-. +|.|+.|-....-.+..
T Consensus        24 ~~i~~ia~G-~-~h~~~l-~-~G~v~~wG~n~~Gqlg~-p~-~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~   96 (282)
T 3qhy_B           24 SGVDAIAGG-Y-FHGLAL-K-GGKVLGWGANLNGQLTM-PA-ATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV   96 (282)
T ss_dssp             SSCCEEEEC-S-SEEEEE-E-TTEEEEEECCSSSTTSC-CG-GGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC
T ss_pred             CCCcEEEeC-C-CeEEEE-E-CCEEEEEeCCCCCCCCC-Cc-cCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC
Confidence            467777766 2 333444 4 89999997543222211 10 11335666765444433334 89999998654333322


Q ss_pred             ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         123 NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       123 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                      .......|..++....  ..+.-. +|.|..|-... ++.-.....                   ...|..++....  +
T Consensus        97 P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~-------------------~~~i~~i~~G~~--~  152 (282)
T 3qhy_B           97 PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEA-------------------QSGVTALDGGVY--T  152 (282)
T ss_dssp             CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGG-------------------GSSEEEEEECSS--E
T ss_pred             CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccC-------------------CCCeEEEEcccC--E
Confidence            2222456888877643  333334 89999998765 222111011                   114666666443  2


Q ss_pred             EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE
Q psy8152         202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI  281 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~  281 (444)
                      .+.-. +|.|..|-...  ..+. -........|..|+..... .++.  .+|.|+.|-... ...+..-......|..+
T Consensus       153 ~~~l~-~G~v~~wG~n~--~gql-g~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~-~gqlg~p~~~~~~v~~i  224 (282)
T 3qhy_B          153 ALAVK-NGGVIAWGDNY--FGQT-TVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR-YKQTTVPTEALSGVSAI  224 (282)
T ss_dssp             EEEEE-TTEEEEEECCT--TSTT-SCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT-TSTTCCCGGGGSSCCEE
T ss_pred             EEEEE-CCEEEEecCCC--CCCC-CCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC-CCCCCCCcccCCCceEE
Confidence            33334 79999998761  1111 1000112456777665432 3333  599999998765 22222111123457777


Q ss_pred             EecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152         282 ACPLNENLILSVSLDRHFRVHDFHSK  307 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~~~~~  307 (444)
                      +.... ..++. . +|.|+.|-....
T Consensus       225 ~~G~~-h~~al-~-~g~v~~wG~n~~  247 (282)
T 3qhy_B          225 ASGEW-YSLAL-K-NGKVIAWGSSRT  247 (282)
T ss_dssp             EECSS-CEEEE-E-TTEEEEESTTCC
T ss_pred             EcCCC-EEEEE-E-CCEEEEecCCCC
Confidence            76443 33333 3 999999977653

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.51  E-value=0.48  Score=44.46  Aligned_cols=115  Identities=9%  Similarity=0.069  Sum_probs=67.6

Q ss_pred             CCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeee--eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE
Q psy8152         128 PQLECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFS--AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV  204 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  204 (444)
                      .....+.++|+|++++.++. +.++.++++......+.  +..... ......       .........+|.++|....+
T Consensus       323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~ae~-------e~GlGPlHt~Fd~~G~aYTt  394 (638)
T 3sbq_A          323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIVGEP-------ELGLGPLHTTFDGRGNAYTT  394 (638)
T ss_dssp             SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEEECC-------BCCSCEEEEEECSSSEEEEE
T ss_pred             CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc-ceEeec-------cCCCcccEEEECCCCceEee
Confidence            34456788999999887764 78899999985221100  000000 000000       01124778999999966667


Q ss_pred             EeCCceEEEEEcCC------C-CCccceEEEeCCCCCeeEEEE------ccCCCEEEEEc
Q psy8152         205 CSKQGYVRVYDPKI------T-TQRRPVLKVDIPDVALSCITT------TNQSHYVIVGS  251 (444)
Q Consensus       205 ~~~d~~i~i~d~~~------~-~~~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~  251 (444)
                      ..-|..|.-|++..      . .....+..+..|-.+ -.+.-      .|+|++|++..
T Consensus       395 lfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          395 LFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred             eeecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence            77899999999971      0 112344556555443 22322      56788888853

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.47  E-value=0.15  Score=50.47  Aligned_cols=197  Identities=10%  Similarity=0.088  Sum_probs=102.9

Q ss_pred             eCCCeEEEEecC----CcEEEEEcCCCCccccc-c------ccCCCeEEEEEec-cCCEEEEeeCC------CeEEEEEc
Q psy8152          95 RYDECILTAVKS----GDVKLWRYKTEPDQWTN-F------NVGPQLECMKHNK-HSNIIATGGKE------NDLKLWDL  156 (444)
Q Consensus        95 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~vwd~  156 (444)
                      .++.+++.|+.+    ..+.+||..+++..... .      .....-.+++..+ ++.+++.|+.+      +.+.+||+
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            556677777653    46888888876544321 1      1111122334443 67778888754      34778888


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc--eEEEEEcCCCCCccceEE---EeCC
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG--YVRVYDPKITTQRRPVLK---VDIP  231 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~---~~~~  231 (444)
                      .+.+-...-....                 +..-.+++...++++++.|+.++  .+.+||+. +.....+..   +...
T Consensus       476 ~t~~W~~~~~~p~-----------------~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~-t~~W~~~~~~g~~p~~  537 (695)
T 2zwa_A          476 KTREWSMIKSLSH-----------------TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVT-EEIFKDVTPKDEFFQN  537 (695)
T ss_dssp             TTTEEEECCCCSB-----------------CCBSCEEEECTTSCEEEECCBCSSCSEEEEETT-TTEEEECCCSSGGGGS
T ss_pred             CCCcEEECCCCCC-----------------CcccceEEEEcCCEEEEECCCCCCCCEEEEECC-CCceEEccCCCCCCCc
Confidence            7754222110000                 00122333334778888887655  68999988 222222221   1112


Q ss_pred             CCCeeEEEEccC-CCEEEEEcCC-------CcEEEEEcCCCCcc-----eeEecc---ccCceeEEEecCCCCEEEEEEC
Q psy8152         232 DVALSCITTTNQ-SHYVIVGSTT-------GDMMAVDLRGKGKP-----CYKYKG---FAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       232 ~~~i~~~~~~~~-~~~l~~~~~d-------g~i~iwd~~~~~~~-----~~~~~~---h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      .....++.+... +++++.|+..       +.+.+||+.+ ...     ...+..   ....-.+++...++++++.|+.
T Consensus       538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~-~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~  616 (695)
T 2zwa_A          538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA-ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT  616 (695)
T ss_dssp             CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT-TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred             ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC-CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence            222234556655 6677777652       4588999987 551     112211   1111112222233677777764


Q ss_pred             --------CCcEEEEEcCCCceE
Q psy8152         296 --------DRHFRVHDFHSKKLL  310 (444)
Q Consensus       296 --------dg~i~vw~~~~~~~~  310 (444)
                              -..|.+||+.+.+-.
T Consensus       617 ~~~~~~~~~~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          617 SPSGLFDRTNSIISLDPLSETLT  639 (695)
T ss_dssp             CSSCCCCTTTSEEEEETTTTEEE
T ss_pred             cCCCCCCCCCeEEEEECCCCeEE
Confidence                    345889998876543

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.35  E-value=0.33  Score=51.04  Aligned_cols=235  Identities=12%  Similarity=0.139  Sum_probs=128.2

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Cccccceeecc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSF   85 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~   85 (444)
                      +.|+.- ...++.|+++.+...       ++.+.....|.-=.|-  +.+.|+..+. ..|+.|++.. ..+.+.|..+.
T Consensus        78 ~iiALr-ag~~lQiFnl~~k~k-------lks~~~~e~VvfWkWi--s~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~  146 (1630)
T 1xi4_A           78 KVIALK-AGKTLQIFNIEMKSK-------MKAHTMTDDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQPVKMFDRHS  146 (1630)
T ss_pred             ceEEEe-cCCeEEEeehHHhhh-------hcccccCCCceEEEec--CCCeeEEEcC-CeEEEeccCCCCccHHHHhcch
Confidence            344444 477899999877653       2222234566666676  3555555554 5899999964 34444443222


Q ss_pred             c--cccEEEE--EeCCCeEEEEe-------cCCcEEEEEcCCCCccccccccCCCeEEEEEe--c-cCCEEEEeeC---C
Q psy8152          86 G--EGDIVGV--SRYDECILTAV-------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN--K-HSNIIATGGK---E  148 (444)
Q Consensus        86 ~--~~~v~~~--s~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~~~---d  148 (444)
                      .  ...|...  +++.+.++..+       -.|.+.+|....+... .+.+|.+.-..+...  + ..++++.+..   .
T Consensus       147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g  225 (1630)
T 1xi4_A          147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG  225 (1630)
T ss_pred             hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence            1  3344443  45666654332       3488999998876554 355565443333331  1 1223332222   2


Q ss_pred             CeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152         149 NDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       149 ~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  227 (444)
                      +.++|.++... ...   .....+..-+-+.|+    .......++..++....+...+.-|.|++||+.   ++.+++.
T Consensus       226 ~kLhi~Ei~~~~~~~---~~f~kk~~~~~~~~~----~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~---t~~~i~~  295 (1630)
T 1xi4_A          226 GKLHIIEVGTPPTGN---QPFPKKAVDVFFPPE----AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE---TGTCIYM  295 (1630)
T ss_pred             ceEEEEecCCCccCC---CCCccccccccCCcc----cccCcceEEEeccccCEEEEEecCceEEEEecc---cchhhhh
Confidence            68888888542 100   111111112222332    112245678888887888888999999999999   6777665


Q ss_pred             EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         228 VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       228 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      -+....+|...+-++...=++.....|.|.-..+..
T Consensus       296 ~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~  331 (1630)
T 1xi4_A          296 NRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE  331 (1630)
T ss_pred             ccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence            554455555444443322344444666655555544

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.34  E-value=0.033  Score=45.45  Aligned_cols=109  Identities=10%  Similarity=-0.032  Sum_probs=64.6

Q ss_pred             ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc----cceEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR----RPVLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      .+..++|+|++.+.++  .+|.++-.+.. +...    ..-..+-. .-....++.|.|+|.+.++  .||.|+-++..+
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~-t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPP-THDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCC-CSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCC-CCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            3779999999887776  66766665554 1011    01111110 1112478999999987776  569888887643


Q ss_pred             CCccee-----Ee-ccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         264 KGKPCY-----KY-KGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       264 ~~~~~~-----~~-~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      .+..-.     .+ ..--..+..|.|.|+|.+.+..  ++.++-+..
T Consensus       117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~  161 (236)
T 1tl2_A          117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALP  161 (236)
T ss_dssp             STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred             CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCC
Confidence            111110     11 0111467899999999877666  777654433

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.29  E-value=0.42  Score=44.46  Aligned_cols=112  Identities=11%  Similarity=0.096  Sum_probs=60.7

Q ss_pred             CCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee--eeeecccceeeEeeeCCCcccccCccceeEEEEecC---CCEE
Q psy8152         128 PQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN---SDKV  202 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l  202 (444)
                      ...+.|+|.|+++++++-...+.|++++...++..  ..+....       ..+     .....+..|+|+|+   +..|
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~-------~~~-----~g~~Gllgia~~Pdf~~~g~l   94 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV-------NDA-----DGQNGLLGFAFHPDFKNNPYI   94 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC-------CCT-----TSSCSEEEEEECTTTTTSCEE
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc-------ccc-----CCCCceeEEEECCCcCcCCEE
Confidence            35679999999987777554457888876544322  1111100       000     01124779999995   4444


Q ss_pred             EEEeC-------------CceEEEEEcCCCC----CccceEE-EeC-CCCCeeEEEEccCCCEEEEEc
Q psy8152         203 AVCSK-------------QGYVRVYDPKITT----QRRPVLK-VDI-PDVALSCITTTNQSHYVIVGS  251 (444)
Q Consensus       203 ~~~~~-------------d~~i~i~d~~~~~----~~~~~~~-~~~-~~~~i~~~~~~~~~~~l~~~~  251 (444)
                      .++..             ...|.-|++....    ..+.+.. +.. .......|+|.|+|.+.++.+
T Consensus        95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A           95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence            43332             2356666554100    1122222 221 123468999999998777644

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.02  E-value=0.79  Score=40.97  Aligned_cols=65  Identities=12%  Similarity=0.128  Sum_probs=40.9

Q ss_pred             ceeEEEEec-------CCCEEEEEeCCceEEEEEcCCCCCccceEE--Ee-CCCCCeeEEEEccCCCEEEEEc-CCCcE
Q psy8152         189 WVNGISFLP-------NSDKVAVCSKQGYVRVYDPKITTQRRPVLK--VD-IPDVALSCITTTNQSHYVIVGS-TTGDM  256 (444)
Q Consensus       189 ~i~~~~~~~-------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i  256 (444)
                      .+..++|.+       ++.++++....+.|...++.   ....+..  +. .....+..+++.|+|.++++.. .+|.|
T Consensus       272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I  347 (353)
T 2g8s_A          272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN---GDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL  347 (353)
T ss_dssp             CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEE---TTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred             CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeC---CCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence            467788864       46677777777888888887   3322221  21 2234688999999998666533 34433

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=95.42  E-value=1.5  Score=39.79  Aligned_cols=305  Identities=8%  Similarity=-0.046  Sum_probs=131.5

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC----eEEEEeCCCCccccce
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ----KIKIYDTDFKNFNTNT   81 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~----~i~vw~~~~~~~~~~~   81 (444)
                      ...|++|+..| +.++....+..   .++.+........|.+|++.|.+...|+++...|    .|...+ ..++.-..+
T Consensus        22 ~g~l~vgt~~G-l~~~~~~~~g~---~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~   96 (394)
T 3b7f_A           22 PVMLLVATIKG-AWFLASDPARR---TWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEA   96 (394)
T ss_dssp             CCEEEEEETTE-EEEEEECTTSC---SEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEEC
T ss_pred             CCEEEEEecCc-eEEEECCCCCC---CceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceEC
Confidence            45788888887 55555433111   1222211112457999999943455666666555    444332 222211111


Q ss_pred             ee----cc--------ccccEEEEE--e-C-CCeEEEEecCCcEEEEEcCCCCcccccc-------------------cc
Q psy8152          82 DV----SF--------GEGDIVGVS--R-Y-DECILTAVKSGDVKLWRYKTEPDQWTNF-------------------NV  126 (444)
Q Consensus        82 ~~----~~--------~~~~v~~~s--~-~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~  126 (444)
                      ..    ..        ....|.++.  | + ...|.+++..+.|...+ ..++.-....                   ..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~  175 (394)
T 3b7f_A           97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPD  175 (394)
T ss_dssp             SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred             CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCC
Confidence            10    00        112455554  3 2 56666666666554432 1222111111                   11


Q ss_pred             CCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEE
Q psy8152         127 GPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAV  204 (444)
Q Consensus       127 ~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~  204 (444)
                      ...+.+|.+.| +...|+.+...+.|...+ ..++.-..+.....    ..+.|... ......+.+|++.|.. ..|.+
T Consensus       176 ~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~----~~~~p~~~-~~~g~~~~~i~~~~~~~~~l~v  249 (394)
T 3b7f_A          176 GPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCA----ANFLPDPN-VEFGHDPHCVVQHPAAPDILYQ  249 (394)
T ss_dssp             CCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCC----CTTSSSSS-SSSCBCEEEEEECSSSTTEEEE
T ss_pred             CCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCcc----ccccCCCc-cccCcceeEEEECCCCCCEEEE
Confidence            23578999988 445555555444443322 12222111110000    00000000 0001248889998863 56666


Q ss_pred             EeCCceEEEEEcCCCCCccceEE-EeCC-CCCeeEEEEccC-CCEEEEEcC-----------CCcEEEEEcCCCCcceeE
Q psy8152         205 CSKQGYVRVYDPKITTQRRPVLK-VDIP-DVALSCITTTNQ-SHYVIVGST-----------TGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       205 ~~~d~~i~i~d~~~~~~~~~~~~-~~~~-~~~i~~~~~~~~-~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~  270 (444)
                      +...+ |...+-. ......+.. +... ...+.+++++|. ...|+++..           ++...||.....++....
T Consensus       250 g~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~  327 (394)
T 3b7f_A          250 QNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQR  327 (394)
T ss_dssp             EETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEE
T ss_pred             EcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceE
Confidence            66555 4443322 111111110 1110 023567888763 334444421           233455554441333333


Q ss_pred             ec-ccc--C-----ceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEc
Q psy8152         271 YK-GFA--G-----CVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVR  325 (444)
Q Consensus       271 ~~-~h~--~-----~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~  325 (444)
                      +. +..  .     ....++++|.. ..|+.++..+.|..-. ..++.-..+. .-..+.+++|.
T Consensus       328 ~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          328 QDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             ECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred             CCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence            32 101  0     11357888753 4566666566554322 2233322222 23346666553

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=94.72  E-value=2  Score=37.70  Aligned_cols=245  Identities=11%  Similarity=0.024  Sum_probs=130.9

Q ss_pred             cccEEEecCCCcEEEEEcCCCccce---eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEe---CCC-----
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCII---KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYD---TDF-----   74 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~---~~~-----   74 (444)
                      ...+++-+..|.|+--.+...+...   +-...+.. .....+..+... .....|+.-+..|.++-..   +..     
T Consensus         3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~-ke~D~~~~~~~~-~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~   80 (327)
T 3uc1_A            3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGL-KQDDIVAHFFVC-STHDLILFFTTQGRVYRAKAYDLPEASRTA   80 (327)
T ss_dssp             CEEEEEEETTSEEEEEEHHHHHHHC--------CCC-CGGGCEEEEEEE-ETTSEEEEEETTSEEEEEEGGGSCBCCSSS
T ss_pred             ccEEEEEeCCCEEEEeeHHHhhhcccCCCCcccccc-CCCCEEEEEEEe-CCCCEEEEEeCCCeEEEEEHHHCcCCCccC
Confidence            4578888999999987754322100   00111111 234455555555 4566677666678766544   332     


Q ss_pred             -Ccccc-ceeeccccccEEEEEe-----CCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCCE
Q psy8152          75 -KNFNT-NTDVSFGEGDIVGVSR-----YDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSNI  141 (444)
Q Consensus        75 -~~~~~-~~~~~~~~~~v~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~  141 (444)
                       |..+. .+.+ .....|.++.+     +..+++.++..|.|+...+.......      ....-...+..+........
T Consensus        81 ~G~~i~~~l~l-~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~  159 (327)
T 3uc1_A           81 RGQHVANLLAF-QPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDD  159 (327)
T ss_dssp             CCEEHHHHTTC-CTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCE
T ss_pred             CCEEHHHccCC-CCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCE
Confidence             22211 1222 22445555421     46789999999999998865422111      11122455655555555567


Q ss_pred             EEEeeCCCeEEEEEcC--CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-
Q psy8152         142 IATGGKENDLKLWDLN--TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI-  218 (444)
Q Consensus       142 l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-  218 (444)
                      |+..+..|.+..+...  .-...   ......+..+.+       .....|.++...+.+.+|+..+..|.++.-.+.. 
T Consensus       160 ill~T~~G~~~rf~~~~~eip~~---gr~a~Gv~~i~L-------~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~  229 (327)
T 3uc1_A          160 LLLVSANGQSIRFSATDEALRPM---GRATSGVQGMRF-------NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEY  229 (327)
T ss_dssp             EEEEETTSEEEEEECCTTTSCCC---CTTSBCEESSCC-------CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred             EEEEECCCeEEEEECcccccCcC---CcCCCCeeeecC-------CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence            8888888988888776  31111   000011111111       1123577776666667899999999999887651 


Q ss_pred             ---CCCccceEE--EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         219 ---TTQRRPVLK--VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       219 ---~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                         ....+-+..  +......+..+........|+..+..|.+.-+....
T Consensus       230 ~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~  279 (327)
T 3uc1_A          230 PVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ  279 (327)
T ss_dssp             CBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred             cccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence               011122222  222123344444444445666677778777776543

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=94.13  E-value=3.1  Score=37.28  Aligned_cols=151  Identities=12%  Similarity=-0.004  Sum_probs=86.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccce---eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--------
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCII---KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD--------   73 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~--------   73 (444)
                      +...+++.+.+|.|+--.+...+...   +-+..+. +.....+..+... .....|+..+..|.++-+...        
T Consensus         6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~-lke~D~l~~~~~~-~t~d~ll~fT~~G~~~~~~~~eip~~~r~   83 (370)
T 3l6v_A            6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAS-TKEEDFIDQLWLV-NTHDTLLTFTSSGKVFWLPVHQLPEAGSN   83 (370)
T ss_dssp             CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEE-CSCCCCEEEEEEE-CTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred             CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecc-cCCCCEEEEEEEe-cCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence            45688999999999987764322100   0011111 1235566666666 456777777777887766532        


Q ss_pred             -CCcccc-ceeeccccccEEEEEe-----CCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCC
Q psy8152          74 -FKNFNT-NTDVSFGEGDIVGVSR-----YDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        74 -~~~~~~-~~~~~~~~~~v~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~  140 (444)
                       .|..+. .+.+. ....|.++.+     .+.+|+.++..|.++...+.......      ..+.-...+..+.......
T Consensus        84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~  162 (370)
T 3l6v_A           84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR  162 (370)
T ss_dssp             SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred             cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence             122211 12222 2445555532     35689999999999998865322110      1112245555555555556


Q ss_pred             EEEEeeCCCeEEEEEcCC
Q psy8152         141 IIATGGKENDLKLWDLNT  158 (444)
Q Consensus       141 ~l~~~~~d~~i~vwd~~~  158 (444)
                      .|+..+..|.+..+....
T Consensus       163 ~i~l~T~~G~~irf~~~~  180 (370)
T 3l6v_A          163 DVLLFASNGKTVRFGEST  180 (370)
T ss_dssp             EEEEEETTSEEEEEEGGG
T ss_pred             eEEEEeCCCeEEEEEccc
Confidence            777788888888887643

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=93.60  E-value=3.1  Score=35.62  Aligned_cols=221  Identities=12%  Similarity=0.091  Sum_probs=117.6

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~   93 (444)
                      +|.|+.|-........  +. .   .....|..++..  ....++. . +|.|+.|-... +++-...   .-...|..+
T Consensus        41 ~G~v~~wG~n~~Gqlg--~p-~---~~~~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~---~~~~~v~~i  107 (282)
T 3qhy_B           41 GGKVLGWGANLNGQLT--MP-A---ATQSGVDAIAAG--NYHSLAL-K-DGEVIAWGGNEDGQTTVPA---EARSGVDAI  107 (282)
T ss_dssp             TTEEEEEECCSSSTTS--CC-G---GGGSCCCEEEEC--SSEEEEE-E-TTEEEEEECCTTSTTCCCG---GGSSSEEEE
T ss_pred             CCEEEEEeCCCCCCCC--CC-c---cCCCCEEEEEeC--CCEEEEE-E-CCEEEEeeCCCCCCCCCCc---ccCCCeEEE
Confidence            8999999865433210  11 0   123467777766  2344444 4 89999997543 2221111   113467777


Q ss_pred             EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceee
Q psy8152          94 SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus        94 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                      +.-..+.+.-. +|.|+.|-....-.+.........|..++...... ++ -. +|.|..|-....-.+-. +.      
T Consensus       108 a~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~gqlg~-p~------  176 (282)
T 3qhy_B          108 AAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LA-VK-NGGVIAWGDNYFGQTTV-PA------  176 (282)
T ss_dssp             EEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EE-EE-TTEEEEEECCTTSTTSC-CG------
T ss_pred             ECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EE-EE-CCEEEEecCCCCCCCCC-ce------
Confidence            76555555556 99999998665333322222345677776654322 22 23 69999997665221110 00      


Q ss_pred             EeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCCCEEEEEcC
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQSHYVIVGST  252 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  252 (444)
                                 .....|..|+.... ..++.  .+|.|+.|=.....+. .+.    .....|..|+..... .++..  
T Consensus       177 -----------~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~h-~~al~--  235 (282)
T 3qhy_B          177 -----------EAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEWY-SLALK--  235 (282)
T ss_dssp             -----------GGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSSC-EEEEE--
T ss_pred             -----------ecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCCE-EEEEE--
Confidence                       00124777766443 22333  5999999976611111 111    112347777765443 33333  


Q ss_pred             CCcEEEEEcCCCCcceeEeccccCceeEEEecC
Q psy8152         253 TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL  285 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~  285 (444)
                      +|.|+.|-... ..++..    ...|..++...
T Consensus       236 ~g~v~~wG~n~-~gq~~v----~~~v~~iaaG~  263 (282)
T 3qhy_B          236 NGKVIAWGSSR-TAPSSV----QSGVSSIEAGP  263 (282)
T ss_dssp             TTEEEEESTTC-CCCGGG----SSCEEEEEECS
T ss_pred             CCEEEEecCCC-CccccC----CCCcEEEEECc
Confidence            99999997666 433322    23455555543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=93.23  E-value=5.2  Score=37.04  Aligned_cols=104  Identities=16%  Similarity=0.143  Sum_probs=55.2

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc------ccccE--EEEEeC---CCeEEEEec------
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF------GEGDI--VGVSRY---DECILTAVK------  105 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------~~~~v--~~~s~~---~~~l~~~~~------  105 (444)
                      ...+.|+|. |++.++++-...+.|++++..++.......+..      .....  ++++|+   +..|.++..      
T Consensus        27 ~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           27 NKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             SSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence            356799999 788766654443578888765554332221111      12333  455664   444444332      


Q ss_pred             -------CCcEEEEEcCCCC-------cccc-cc-ccCCCeEEEEEeccCCEEEEeeC
Q psy8152         106 -------SGDVKLWRYKTEP-------DQWT-NF-NVGPQLECMKHNKHSNIIATGGK  147 (444)
Q Consensus       106 -------dg~i~iw~~~~~~-------~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~  147 (444)
                             ...|.-|++....       .+.. +. ........|+|.|+|.++++.+.
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                   2345555543321       1111 11 11234789999999987776553

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=93.17  E-value=4  Score=35.51  Aligned_cols=245  Identities=10%  Similarity=0.010  Sum_probs=125.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCcccee---eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--------
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIK---NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD--------   73 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~--------   73 (444)
                      +...+++.+.+|.|+--.+..-+....   ....+. +.-.+.+..+... .....|+..+..|.++-+...        
T Consensus         2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~-~ke~D~l~~~~~~-~~~~~ll~fT~~G~~~~~~~~elp~~~~~   79 (307)
T 1zi0_A            2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAAR-IKEEDFIDRLLVA-NTHDHILCFSSRGRVYSMKVYQLPEATRG   79 (307)
T ss_dssp             CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEE-ETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred             CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeee-eCCCCEEEEEEEE-CCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence            346788899999999887654332100   011111 1123444444444 356777777777887665542        


Q ss_pred             -CCcccc-ceeeccccccEEEEEe-----CCCeEEEEecCCcEEEEEcCCCCcc-------ccccccCCCeEEEEEeccC
Q psy8152          74 -FKNFNT-NTDVSFGEGDIVGVSR-----YDECILTAVKSGDVKLWRYKTEPDQ-------WTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        74 -~~~~~~-~~~~~~~~~~v~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~-------~~~~~~~~~v~~~~~~~~~  139 (444)
                       .|..+. .+.+ .....|.++.+     ++.+++.++..|.++...+......       ..+..+ ..+..+......
T Consensus        80 a~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~  157 (307)
T 1zi0_A           80 ARGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE  157 (307)
T ss_dssp             SCCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred             CCCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence             122211 2222 22345555532     4567899999999999876522111       112223 556555555555


Q ss_pred             CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-
Q psy8152         140 NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI-  218 (444)
Q Consensus       140 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-  218 (444)
                      ..++..+..|.+..+....-...   ......+..+.+.       ....|.++...+++..|++.+..|.++-..+.. 
T Consensus       158 ~~i~l~T~~G~~irf~~~~v~~~---gr~a~Gv~~i~L~-------~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~  227 (307)
T 1zi0_A          158 DEVMLFSAEGKVVRFKESSVRAM---GCNTTGVRGIRLG-------EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEY  227 (307)
T ss_dssp             CEEEEEETTSEEEEEEGGGSCBC---CTTCCCEECCCCC-------TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGS
T ss_pred             CEEEEECCCCcEEEEEHHHcCcc---CCCCCCeEeEEeC-------CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHh
Confidence            56777888888888876531111   1001111111221       122466665555556788889999999888741 


Q ss_pred             -----CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         219 -----TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       219 -----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                           ...+.....+......+..+....+...|+..+.+|.+.-+.+..
T Consensus       228 ~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~  277 (307)
T 1zi0_A          228 PTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE  277 (307)
T ss_dssp             CCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred             ccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence                 011111222322234444444433344555666677766666544

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=90.12  E-value=10  Score=34.01  Aligned_cols=155  Identities=6%  Similarity=-0.002  Sum_probs=83.9

Q ss_pred             cEEEEEcCCC--Ccccccc------ccCCCeEEEEEe---cc----CCEEEEe-eCCCeEEEEEcCCceeeeeeecccce
Q psy8152         108 DVKLWRYKTE--PDQWTNF------NVGPQLECMKHN---KH----SNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHR  171 (444)
Q Consensus       108 ~i~iw~~~~~--~~~~~~~------~~~~~v~~~~~~---~~----~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~  171 (444)
                      +|.+||+.+.  +.++.+.      .....+..+++.   |.    ..+++.+ +..+-|.|+|+.+++.-+.+......
T Consensus       124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p  203 (381)
T 3q6k_A          124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA  203 (381)
T ss_dssp             EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred             eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence            5778888888  6664221      123457888887   22    2333333 34678999999998766544211110


Q ss_pred             eeEeeeCCCcccccCccceeEEEEecC----CCEEEEEeCCceEEEEEcCC----CC-CccceEEEe--CCCCCeeEEEE
Q psy8152         172 VLVYSVKPDEFDLRRPVWVNGISFLPN----SDKVAVCSKQGYVRVYDPKI----TT-QRRPVLKVD--IPDVALSCITT  240 (444)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~----~~-~~~~~~~~~--~~~~~i~~~~~  240 (444)
                      -....+.-.+........|..|+++|+    ++.|.-....+ -++|.+.+    .. ....+..+-  +....-..+++
T Consensus       204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~  282 (381)
T 3q6k_A          204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY  282 (381)
T ss_dssp             CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred             ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence            000011111222223346999999998    67776665543 23443321    11 112222221  11123345667


Q ss_pred             c-cCCCEEEEEcCCCcEEEEEcCC
Q psy8152         241 T-NQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       241 ~-~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      . .+|.++++--..+.|..|+...
T Consensus       283 D~~~G~ly~~~~~~~aI~~w~~~~  306 (381)
T 3q6k_A          283 DPKTKVIFFAEANTKQVSCWNTQK  306 (381)
T ss_dssp             CTTTCEEEEEESSSSEEEEEETTS
T ss_pred             eCCCCeEEEEeccCCeEEEEeCCC
Confidence            5 6788888888888999999764

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=89.28  E-value=10  Score=32.93  Aligned_cols=200  Identities=9%  Similarity=0.063  Sum_probs=112.1

Q ss_pred             CcccEEEecCCCcEEEEEcCCCcccee---eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-------
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIK---NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-------   74 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-------   74 (444)
                      +...+++.+.+|.|+-..+..-+....   -...+. +.-...+..+... .....++..+..|.++-.....       
T Consensus         7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~-lke~D~l~~~~~~-~~~~~ll~~T~~G~~~~~~~~~ip~~~r~   84 (312)
T 1suu_A            7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFD-LNDGDEIVIALCV-NTHDYLFMISNEGKLYLINAYEIKDSSRA   84 (312)
T ss_dssp             -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCC-CCTTCCEEEEEEE-ETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred             CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecc-cCCCCEEEEEEEE-CCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence            456788999999999988754432100   111111 1123445555555 3567788888889877766431       


Q ss_pred             --Ccc-ccceeeccccccEEEEE-e----CCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCC
Q psy8152          75 --KNF-NTNTDVSFGEGDIVGVS-R----YDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSN  140 (444)
Q Consensus        75 --~~~-~~~~~~~~~~~~v~~~s-~----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~  140 (444)
                        |.. ...+.+.. ...|.++. .    ...+|+..+..|.++...+.......      ........+..+.......
T Consensus        85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~  163 (312)
T 1suu_A           85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE  163 (312)
T ss_dssp             ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred             CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence              111 11222222 33444442 1    35678889999999998874321110      1122255666666655556


Q ss_pred             EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152         141 IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK  217 (444)
Q Consensus       141 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~  217 (444)
                      .++..+..|.+..+....-...   ......+..+.+.+       ...|.++...+.+..|++.+..|.++...+.
T Consensus       164 ~i~l~T~~G~~~r~~~~ev~~~---gR~~~Gv~~i~L~~-------~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~  230 (312)
T 1suu_A          164 KVICLSKKGSAFIFNSRDVRLT---NRGTQGVCGMKLKE-------GDLFVKVLSVKENPYLLIVSENGYGKRLNMS  230 (312)
T ss_dssp             EEEEEETTSEEEEEEGGGSCBC---CTTBCCEECCCCCT-------TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred             EEEEEeCCCcEEEEEHHHcccc---CCCCCCeEeEEeCC-------CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence            7888888999988887541111   11111122222211       1245666555556778888999999999886

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=88.35  E-value=12  Score=32.51  Aligned_cols=198  Identities=12%  Similarity=0.163  Sum_probs=109.3

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCccc-------cceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcCC--------
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNFN-------TNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYKT--------  116 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~~-------~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~~--------  116 (444)
                      ++..++++.+.+|.|+--.+..-+..       ..+.+..+..-+..+ ......++..+..|.++-+....        
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~   85 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS   85 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence            45778889999999998765432211       111222222222222 34556777788889887776531        


Q ss_pred             -CCccccc--cccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         117 -EPDQWTN--FNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       117 -~~~~~~~--~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                       |..+...  +.....|.++...+   ...+|+..+..|.++...+..-....     ...+..+.+..       ...+
T Consensus        86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-----~~G~~~i~L~~-------~d~l  153 (312)
T 1suu_A           86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-----SRGVIVIKLND-------KDFV  153 (312)
T ss_dssp             --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC---------CEECBCCCT-------TCCE
T ss_pred             CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-----CCcEEEEecCC-------CCEE
Confidence             1211111  22344565554433   45678888999999988775421110     01111111111       1245


Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                      ..+........++..+..|.+..+....      ...+.....+.. ...|..+..-+++..|++.+..|..+...+..
T Consensus       154 v~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e  231 (312)
T 1suu_A          154 TSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  231 (312)
T ss_dssp             EEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             EEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence            5555555457788889999999998761      011222222332 33455555555566788888999998888754

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=88.34  E-value=16  Score=33.86  Aligned_cols=30  Identities=17%  Similarity=0.137  Sum_probs=23.2

Q ss_pred             cceEEEeeeccCCc-EEEEEEcCCeEEEEeCC
Q psy8152          43 ASVLALNWGNVEES-ELLIAYSGQKIKIYDTD   73 (444)
Q Consensus        43 ~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~   73 (444)
                      ...+.|+|. |++. .|+++...|.|++++..
T Consensus        14 ~~P~~~a~~-pdG~~rl~V~er~G~i~~~~~~   44 (463)
T 2wg3_C           14 RQPVGALHS-GDGSQRLFILEKEGYVKILTPE   44 (463)
T ss_dssp             SSEEEEECC-SSSSCCEEEEETTTEEEEECTT
T ss_pred             CCceEEEEC-CCCCeEEEEEeCCceEEEEeCC
Confidence            345889999 6875 57777788999999754

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=88.05  E-value=12  Score=31.95  Aligned_cols=207  Identities=12%  Similarity=0.068  Sum_probs=114.1

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEe---CCCCccccceeeccccccEEEEEe---CCCeEEEEecCCcEEEEEcC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYD---TDFKNFNTNTDVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~---~~~~~~~~~~~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~  115 (444)
                      .+.+..+... ....+|+.-+..|.++--.   +..+.... + + .....|.++-+   +..+++.++..|.++...+.
T Consensus        23 gD~~~~~~~~-~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~   98 (276)
T 3no0_A           23 KAPVVNILRV-PFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-K-SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLA   98 (276)
T ss_dssp             CCCEEEEEEE-ETTSCEEEEETTSEEEEECSHHHHTSEECC-C-S-STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGG
T ss_pred             CCeEEEEEEE-CCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-C-CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHH
Confidence            4556666555 4566777777778876543   32221111 2 2 22455555532   35689999999999999876


Q ss_pred             CCC-----ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152         116 TEP-----DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV  190 (444)
Q Consensus       116 ~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (444)
                      .-.     .......-...+..+........++..+..|.+..+....-...   ......+..+.+.       ....|
T Consensus        99 ~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~---gR~a~Gv~~i~L~-------~~d~v  168 (276)
T 3no0_A           99 EFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPS---TPGARGVQGIKLE-------KNDET  168 (276)
T ss_dssp             GTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBC---CTTCCCEECCCCC-------TTCCE
T ss_pred             HhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCc---CCCCCCEEEEccC-------CCCEE
Confidence            532     00011223455666655555567888888898888876431111   0000111111111       12346


Q ss_pred             eEEEEecCCCEEEEEeCCceEEEEEcCC----CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEE--EEcCC
Q psy8152         191 NGISFLPNSDKVAVCSKQGYVRVYDPKI----TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMA--VDLRG  263 (444)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i--wd~~~  263 (444)
                      .++...+++..++..+..|.++...+..    ....+-+..+ .....+..+........++..+..|.+..  ++...
T Consensus       169 v~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~  246 (276)
T 3no0_A          169 SGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD  246 (276)
T ss_dssp             EEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred             EEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence            6666666667888999999999988751    1112223333 22333444433333446666777787777  76554

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=87.24  E-value=16  Score=32.77  Aligned_cols=47  Identities=15%  Similarity=0.179  Sum_probs=26.9

Q ss_pred             eEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152         236 SCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       236 ~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s  284 (444)
                      ..++++|. ...|++++..+.|..-. .. ++.-..+..+-..+.+|+|.
T Consensus       344 ~~~~~~p~~~~~l~~g~~~g~l~~S~-D~-G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          344 QAMTADAHAPVGVYFGTTGGEIWASA-DE-GEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             BSEEECCSSSCCEEEECTTSCEEEES-ST-TSBCEEEECSCSCEEEEEEE
T ss_pred             EEEEECCCCCCEEEEEeCCCeEEEEC-CC-CCCceEcccCCCCeeEEEEe
Confidence            46888874 34566776666554332 22 45455555444567777664

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=85.63  E-value=18  Score=31.64  Aligned_cols=244  Identities=13%  Similarity=0.092  Sum_probs=126.5

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC---------CC
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD---------FK   75 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~---------~~   75 (444)
                      +...+++.+.+|.|+--.+...+..  ....+. +.-.+.+..+... .....|+..+..|.++-+...         .|
T Consensus         4 ~e~~~v~lT~~G~IKr~~~~~~~~~--~~~~~~-lke~D~l~~~~~~-~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G   79 (323)
T 1wp5_A            4 SEDVIVTVTKDGYVKRTSLRSYAAS--NGQDFA-MKDTDRLLAMLEM-NTKDVLLLFTNKGNYLYCPVHELPDIRWKDLG   79 (323)
T ss_dssp             CCEEEEEEETTCEEEEEEHHHHHHT--TTCCCC-CCTTCCEEEEEEE-ETTSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred             CCcEEEEEeCCCEEEEeEHHHhhhc--Cccccc-cCCCCEEEEEEEE-CCCCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence            4567888999999998876432210  000111 1123445555554 456777777778887665542         12


Q ss_pred             ccc-cceeeccccccEEEEE-e----CCCeEEEEecCCcEEEEEcCCCCcc-------ccccccCCCeEEEEEeccCCEE
Q psy8152          76 NFN-TNTDVSFGEGDIVGVS-R----YDECILTAVKSGDVKLWRYKTEPDQ-------WTNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        76 ~~~-~~~~~~~~~~~v~~~s-~----~~~~l~~~~~dg~i~iw~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      ..+ ..+.+.. ...|.++. .    .+.+++.++..|.++...+......       .....-...+..+........+
T Consensus        80 ~~i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i  158 (323)
T 1wp5_A           80 QHIANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL  158 (323)
T ss_dssp             EEGGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred             cChhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEE
Confidence            211 1122222 33455442 1    2567899999999999887522111       0111223556565555555677


Q ss_pred             EEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCC---
Q psy8152         143 ATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKI---  218 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~---  218 (444)
                      +..+..|.+..+....-...   ......+..+.+.+       ...|.++...+.+. .|++.+..|..+..++..   
T Consensus       159 ~l~T~~G~~irf~~~ev~~~---gR~a~GV~~i~L~~-------~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~  228 (323)
T 1wp5_A          159 FLVTHNGYALWFDESEVSIV---GVRAAGVKGMNLKE-------GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEK  228 (323)
T ss_dssp             EEEETTSEEEEEEGGGSCBC---CSSCCCEECCCCCT-------TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCC
T ss_pred             EEEeCCCcEEEEEHHHCccc---CCCCcCEEEEEeCC-------CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccc
Confidence            88888898888877541111   11111222222221       22466665544455 788889999988887761   


Q ss_pred             -CCCccceEEEe---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152         219 -TTQRRPVLKVD---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       219 -~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  263 (444)
                       ....+-+..+.   .....+..+.....+..++..+..|.+..+.+..
T Consensus       229 ~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~  277 (323)
T 1wp5_A          229 ATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD  277 (323)
T ss_dssp             CCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred             cCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence             00111122221   1122343332223334555666666665555543

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=85.47  E-value=35  Score=34.97  Aligned_cols=38  Identities=8%  Similarity=0.056  Sum_probs=32.4

Q ss_pred             CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      .+.+++..++..++++-+.|+++|+|++.+ ++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t-~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST-NQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTT-TEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCC-CCeEeeec
Confidence            456777778888999999999999999999 88887654

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=84.68  E-value=25  Score=36.10  Aligned_cols=38  Identities=16%  Similarity=0.233  Sum_probs=32.9

Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      .+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            45677777888899999999999999999999988754

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=84.26  E-value=20  Score=31.22  Aligned_cols=199  Identities=8%  Similarity=0.019  Sum_probs=105.6

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCcc--ccceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcC---C------CCcc
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNF--NTNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYK---T------EPDQ  120 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~---~------~~~~  120 (444)
                      |+...+++.+.+|.|+--.+..-+.  ...+....+..-+..+ ......|+..+..|.++-+...   .      |.++
T Consensus         3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i   82 (323)
T 1wp5_A            3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI   82 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred             cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence            4677888999999998775432111  1111222222222222 3455677777888887666542   1      2222


Q ss_pred             ccc--cccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         121 WTN--FNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       121 ~~~--~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      ...  ......|.++...+   +..+++.++..|.++-..+..-.....    ...+..+.+..       ...+..+..
T Consensus        83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r----~~G~~ai~l~e-------~d~lv~~~~  151 (323)
T 1wp5_A           83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY----SKPLTGINLKN-------DDQVVDVHL  151 (323)
T ss_dssp             GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC----SSCEECSCCCT-------TCCEEEEEE
T ss_pred             hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc----cCceEEEEeCC-------CCEEEEEEE
Confidence            111  12334566554333   256789999999999887753111110    01111111111       113445555


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCC
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRG  263 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~  263 (444)
                      ......|+..+..|.+..+....      ...+.....+.. ...|.++...+.+. .|++.+..|..+..++..
T Consensus       152 ~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e  225 (323)
T 1wp5_A          152 TDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTE  225 (323)
T ss_dssp             ECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             eCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence            44556788888999998888751      011112222222 23455554444444 778888888888777653

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=82.30  E-value=24  Score=30.53  Aligned_cols=196  Identities=8%  Similarity=0.013  Sum_probs=102.4

Q ss_pred             CCcEEEEEEcCCeEEEEeCCCCcc-------ccceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcC---C------
Q psy8152          54 EESELLIAYSGQKIKIYDTDFKNF-------NTNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYK---T------  116 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~~~~~-------~~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~---~------  116 (444)
                      +...+++.+.+|.|+--.+..-+.       ...+....+..-+..+ ......|+..+..|.++-+...   .      
T Consensus         2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~   81 (307)
T 1zi0_A            2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR   81 (307)
T ss_dssp             CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred             CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence            567788899999998776543221       1111112222222222 3455667777888887666542   2      


Q ss_pred             CCccccc--cccCCCeEEEEEe---ccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152         117 EPDQWTN--FNVGPQLECMKHN---KHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN  191 (444)
Q Consensus       117 ~~~~~~~--~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (444)
                      |.++..+  ......|.++...   .+..+++..+..|.++-..+..-.....     ..+..+.+..       ...+.
T Consensus        82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r-----~G~~~i~l~~-------~d~lv  149 (307)
T 1zi0_A           82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT-----AGKVAIKLVD-------GDELI  149 (307)
T ss_dssp             CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT-----TCEESSCCCT-------TCCEE
T ss_pred             CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc-----CCeEEEEECC-------CCEEE
Confidence            2221111  2234456666443   2456788899999999887653111100     0011111110       11355


Q ss_pred             EEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         192 GISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       192 ~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                      .+........|+..+..|.+..+....      ...+.....+.. ...|.++...+++..|++.+..|.++-.++.
T Consensus       150 ~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~  225 (307)
T 1zi0_A          150 GVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVA  225 (307)
T ss_dssp             EEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred             EEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence            555544556788888899988887651      011111222322 3345555544455678888899998888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	444
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-04
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.001
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.004
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.001
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.002
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.003

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.1 bits (149), Expect = 3e-11
 Identities = 26/194 (13%), Positives = 56/194 (28%), Gaps = 20/194 (10%)

Query: 110 KLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS 169
            LW  +T     T       +  +     + +  +G  +   KLWD+       +     
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226

Query: 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD 229
                               +N I F PN +  A  S     R++D +   +       D
Sbjct: 227 S------------------DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY-SHD 267

Query: 230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL 289
                ++ ++ +     ++ G    +    D   K        G    V  +    +   
Sbjct: 268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL-KADRAGVLAGHDNRVSCLGVTDDGMA 326

Query: 290 ILSVSLDRHFRVHD 303
           + + S D   ++ +
Sbjct: 327 VATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.4 bits (111), Expect = 2e-06
 Identities = 11/127 (8%), Positives = 36/127 (28%), Gaps = 20/127 (15%)

Query: 91  VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGP--QLECMKHNKHSNIIATGGKE 148
           +          T       +L+  + + +  T  +      +  +  +K   ++  G  +
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291

Query: 149 NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ 208
            +  +WD              +                   V+ +    +   VA  S  
Sbjct: 292 FNCNVWDALKADRAGVLAGHDN------------------RVSCLGVTDDGMAVATGSWD 333

Query: 209 GYVRVYD 215
            ++++++
Sbjct: 334 SFLKIWN 340

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.5 bits (124), Expect = 5e-08
 Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 24/139 (17%)

Query: 91  VGVSRYDECILTAVKSGDVKLWRYKT------------EPDQWTNFNVGPQLECMKHNKH 138
           V  +R  + +++      VKLW  +                + T       +  +   ++
Sbjct: 260 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN 319

Query: 139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN 198
              I +G K+  +  WD  +   +   +   HR  V SV             NG S  P 
Sbjct: 320 DEYILSGSKDRGVLFWDKKSGNPLLMLQ--GHRNSVISV----------AVANGSSLGPE 367

Query: 199 SDKVAVCSKQGYVRVYDPK 217
            +  A  S     R++  K
Sbjct: 368 YNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.7 bits (96), Expect = 1e-04
 Identities = 25/181 (13%), Positives = 60/181 (33%), Gaps = 5/181 (2%)

Query: 132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191
           C+K +     +ATG  +   +++ ++    +    + S                  +++ 
Sbjct: 67  CVKFSNDGEYLATGCNKT-TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR 125

Query: 192 GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS 251
            + F P+   +A  ++   +R++D +       +   +    +L    + ++        
Sbjct: 126 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR 185

Query: 252 TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR 311
           T            G+         G       P +   I + SLDR  RV D  +  L+ 
Sbjct: 186 TVRIWDLRT----GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 241

Query: 312 K 312
           +
Sbjct: 242 R 242

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (120), Expect = 1e-07
 Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 19/169 (11%)

Query: 48  LNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECIL-TAVKS 106
           +    V   E        +  +    +   ++ + +S   G     S      L +  + 
Sbjct: 167 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 226

Query: 107 GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK 166
             +K+W   T     T       +  +  +     I +   +  L++WD    + + +  
Sbjct: 227 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286

Query: 167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD 215
              H                  +V  + F   +  V   S    V+V++
Sbjct: 287 AHEH------------------FVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (97), Expect = 7e-05
 Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 98  ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN 157
           EC     +   V           +++ +     E  K  K    + +G ++  +K+WD++
Sbjct: 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235

Query: 158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK 217
           T   + +     +                  WV G+ F      +  C+    +RV+D K
Sbjct: 236 TGMCLMTLVGHDN------------------WVRGVLFHSGGKFILSCADDKTLRVWDYK 277

Query: 218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG 254
               +R +  ++  +  ++ +     + YV+ GS   
Sbjct: 278 ---NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ 311

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 23/181 (12%), Positives = 52/181 (28%), Gaps = 22/181 (12%)

Query: 132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191
            +  +   +++ +  ++  +K+WD  T     + K  +  V   S       L       
Sbjct: 22  RVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM 81

Query: 192 GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS 251
            I          + +  G+                             +   +   IV +
Sbjct: 82  TIKLWDFQGFECIRTMHGHDHNV----------------------SSVSIMPNGDHIVSA 119

Query: 252 TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR 311
           +    + +     G     + G    V+ +    +  LI S S D+  RV    +K+   
Sbjct: 120 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 179

Query: 312 K 312
           +
Sbjct: 180 E 180

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 4/120 (3%)

Query: 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI 248
            V  + F P    +   S+   ++V+D            +     ++  I+  +    + 
Sbjct: 19  PVTRVIFHPVFSVMVSASEDATIKVWD---YETGDFERTLKGHTDSVQDISFDHSGKLLA 75

Query: 249 VGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK 308
             S    +   D +G       +            P N + I+S S D+  ++ +  +  
Sbjct: 76  SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGY 134

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 20/188 (10%)

Query: 132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191
           C   NK    IA     +++ +++ +  K +   +   H                   V 
Sbjct: 12  CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN----------------GQVT 55

Query: 192 GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS 251
           G+ + P+S+++  C       V+  K  T +  ++ + I   A  C+          VGS
Sbjct: 56  GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA-RCVRWAPNEKKFAVGS 114

Query: 252 TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP---LNENLILSVSLDRHFRVHDFHSKK 308
            +  +       +                +       N  L+ + S D   R+   + K+
Sbjct: 115 GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKE 174

Query: 309 LLRKDYMQ 316
           +  +    
Sbjct: 175 VEERPAPT 182

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 37/325 (11%), Positives = 92/325 (28%), Gaps = 16/325 (4%)

Query: 9   IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIK 68
           I I  +         S +K +    Q  +   +   V  ++W   + + ++   + +   
Sbjct: 22  IAICPNNHEVHIYEKSGNKWV----QVHELKEHNGQVTGVDW-APDSNRIVTCGTDRNAY 76

Query: 69  IYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILT--AVKSGDVKLWRYKTEPDQWTNFNV 126
           ++    + +     +         V              S  + +  ++ E D W   ++
Sbjct: 77  VWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 136

Query: 127 GPQLE----CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF 182
              +      +  + +S ++A G  +   +++     +             +   +    
Sbjct: 137 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 196

Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
                 WV+G+ F  N  +VA  S    V + D         +    +P      +T   
Sbjct: 197 SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL---LAVTFIT 253

Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
           +S  V  G        +           + G     K  +           +LD+     
Sbjct: 254 ESSLVAAGH--DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 311

Query: 303 DFHSKKLLRKDYMQSRLTSILVRSD 327
              +         ++ ++ I V S 
Sbjct: 312 GSAAAGAGLDSLHKNSVSQISVLSG 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 1e-06
 Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 19/104 (18%)

Query: 112 WRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHR 171
             +  +PD++        +  +K         + GK+N L  W      +IF +K  S  
Sbjct: 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-- 307

Query: 172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD 215
                             V       +   +   S      VY+
Sbjct: 308 -----------------SVLSCDISVDDKYIVTGSGDKKATVYE 334

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.8 bits (109), Expect = 3e-06
 Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 17/105 (16%)

Query: 112 WRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHR 171
                E D   N      +  +  +     IA+   +  +K+W++ T K   +       
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT------- 275

Query: 172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDP 216
                       +   +    +  +     +   S  G++   +P
Sbjct: 276 ----------IPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.8 bits (109), Expect = 3e-06
 Identities = 24/254 (9%), Positives = 65/254 (25%), Gaps = 35/254 (13%)

Query: 87  EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE-------------CM 133
           + DI  VS  +   ++    G +K+W  K   ++                          
Sbjct: 14  DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIE 73

Query: 134 KHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193
           +      ++AT     DL  + +               +L   +K   F     +     
Sbjct: 74  RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF---WALKWGAS 130

Query: 194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSH------- 245
           +    S ++     +G   ++           L ++  P + L     +  +        
Sbjct: 131 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSV 190

Query: 246 ------YVIVGSTTG-----DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS 294
                  +  G   G     ++  +      +  +     +  ++ +      +L+    
Sbjct: 191 DISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250

Query: 295 LDRHFRVHDFHSKK 308
               F     +  +
Sbjct: 251 DSNSFGCITLYETE 264

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.8 bits (101), Expect = 3e-05
 Identities = 11/105 (10%), Positives = 27/105 (25%), Gaps = 17/105 (16%)

Query: 112 WRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHR 171
              +       +               S   AT G +  +++WD+ T+K +         
Sbjct: 236 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ- 294

Query: 172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYD 215
                           +    +  +   +  +   S  G +  Y+
Sbjct: 295 ---------------QLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 21/155 (13%), Positives = 36/155 (23%), Gaps = 22/155 (14%)

Query: 78  NTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK 137
            +          I       +   TA           KT       F    +L       
Sbjct: 201 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 260

Query: 138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197
             +     G  N L  +DL   K I +                            ++F  
Sbjct: 261 PKDPNQIYGVLNRLAKYDLKQRKLIKA-------------------ANLDHTYYCVAFDK 301

Query: 198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232
             DK+ +      + V++P        V  + +P 
Sbjct: 302 KGDKLYLGGTFNDLAVFNPD---TLEKVKNIKLPG 333

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 12/71 (16%), Positives = 26/71 (36%)

Query: 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI 248
           +++ I  +P+   + + S  G + VY   I  +   +L+       L C    + +   I
Sbjct: 13  YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI 72

Query: 249 VGSTTGDMMAV 259
              T    +  
Sbjct: 73  YVGTVQGEILK 83

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 0.002
 Identities = 32/245 (13%), Positives = 67/245 (27%), Gaps = 34/245 (13%)

Query: 69  IYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGP 128
           +   D +       +      +  V      +++      VK+W  +TE    T    G 
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ--GH 176

Query: 129 QLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV 188
                        + +G  +  +++WD+ T   I +                        
Sbjct: 177 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT---------------- 220

Query: 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI 248
                      + +   +    V+++D K     + +   +      +        ++VI
Sbjct: 221 ----SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS--AVTCLQFNKNFVI 274

Query: 249 VGSTTGDMMAVDLRGKGKPCYKYK-----GFAGCVKDIACPLNENLILSVSLD----RHF 299
             S  G +   DL+  G+           G  G V  I     + +    S +       
Sbjct: 275 TSSDDGTVKLWDLK-TGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 333

Query: 300 RVHDF 304
            V DF
Sbjct: 334 LVLDF 338

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 18/141 (12%), Positives = 48/141 (34%), Gaps = 11/141 (7%)

Query: 24  SKDKCI-IKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT 81
           S D+ I + N    +++ T       +      +  ++   S   I+++D +        
Sbjct: 155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE--CGACLR 212

Query: 82  DVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK---- 137
            +   E  +  +   ++ I++    G +K+W      D             ++H+     
Sbjct: 213 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 272

Query: 138 ---HSNIIATGGKENDLKLWD 155
                  I +   ++ + +WD
Sbjct: 273 LQFDEFQIVSSSHDDTILIWD 293

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	444
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.95
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.95
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.94
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.94
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.92
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.92
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.91
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.91
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.89
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.84
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.84
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.83
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.82
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.81
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.71
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.67
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.64
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.63
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.59
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.48
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.45
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.39
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.32
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.29
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.27
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.27
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.24
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.22
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.13
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.1
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.1
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.07
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.03
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.02
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.98
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.92
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.83
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.72
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.67
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.65
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.63
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.62
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.53
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.48
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.47
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.44
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	98.33
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.31
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.17
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.1
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.07
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.06
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.99
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.93
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.91
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.73
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.69
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.52
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.5
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.47
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	97.18
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.89
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	96.6
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	96.36
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	96.03
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	95.58
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.57
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.52
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	93.7
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	93.15
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	92.38
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	91.82
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.18
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	90.53
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	89.11
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	86.64
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	82.56

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=322.69  Aligned_cols=307  Identities=11%  Similarity=0.149  Sum_probs=260.7

Q ss_pred             cCCCcEEEEEcCCCcc----ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc---ceeecc
Q psy8152          13 SSTGAFKGVNLSKDKC----IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT---NTDVSF   85 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~---~~~~~~   85 (444)
                      +.+|.+.-..+.....    ...+.+.+..+.|...|+|++|+ |++.+|++|+ ||.|+|||+.++....   .+....
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~H~~~V~~v~fs-~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~   95 (337)
T d1gxra_          18 TADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLN   95 (337)
T ss_dssp             CSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEEC-SSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSC
T ss_pred             CCCCCEEeeccCCcceecCCCCCCceEEEECCCCCcEEEEEEC-CCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecC
Confidence            5566666666544332    13345566666899999999999 7999999987 7999999997654433   333446


Q ss_pred             ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC--ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP--DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      |...|.++  +|++++|++++.||.|++|++....  ....+..|...+.+++|+|++.++++++.++.|++|++.++++
T Consensus        96 h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~  175 (337)
T d1gxra_          96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL  175 (337)
T ss_dssp             TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             CCCcEEEEEEcCCCCEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77777655  6899999999999999999987554  3335567889999999999999999999999999999999998


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      ......+..                  .|++++|++++.++++++.|+.|++||++   ..+.+..+. +...|.+++|+
T Consensus       176 ~~~~~~~~~------------------~v~~l~~s~~~~~~~~~~~d~~v~i~d~~---~~~~~~~~~-~~~~i~~l~~~  233 (337)
T d1gxra_         176 VRQFQGHTD------------------GASCIDISNDGTKLWTGGLDNTVRSWDLR---EGRQLQQHD-FTSQIFSLGYC  233 (337)
T ss_dssp             EEEECCCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT---TTEEEEEEE-CSSCEEEEEEC
T ss_pred             ccccccccc------------------ccccccccccccccccccccccccccccc---cceeecccc-cccceEEEEEc
Confidence            888777766                  79999999999999999999999999999   666666554 77889999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeE
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTS  321 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~  321 (444)
                      |++++|++|+.++.|++||++. +... ....|...|++++|+|++++|++++.||.|++|++.+++++....|...|.+
T Consensus       234 ~~~~~l~~~~~d~~i~i~d~~~-~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~  311 (337)
T d1gxra_         234 PTGEWLAVGMESSNVEVLHVNK-PDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLS  311 (337)
T ss_dssp             TTSSEEEEEETTSCEEEEETTS-SCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEE
T ss_pred             ccccccceeccccccccccccc-cccc-cccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEE
Confidence            9999999999999999999997 6554 5567999999999999999999999999999999999999999889999999


Q ss_pred             EEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152         322 ILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~  354 (444)
                      ++|+++         ++++++++.|+.|+||++
T Consensus       312 ~~~s~d---------~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         312 CDISVD---------DKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEECTT---------SCEEEEEETTSCEEEEEE
T ss_pred             EEEeCC---------CCEEEEEeCCCeEEEEEE
Confidence            998754         578999999999999986

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-42  Score=321.21  Aligned_cols=316  Identities=14%  Similarity=0.146  Sum_probs=260.7

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee-----
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD-----   82 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-----   82 (444)
                      ..+.+..++.+.+|+....+..  .......++|.+.|+||+|+ |++++|++|+ |+.|+||++.+++.+..+.     
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~H~~~V~~l~fs-~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~  105 (388)
T d1erja_          30 DALKKQTNDYYILYNPALPREI--DVELHKSLDHTSVVCCVKFS-NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAA  105 (388)
T ss_dssp             TTSEEECSSCEEEECTTSCCCE--EEEEEEEEECSSCCCEEEEC-TTSSEEEEEC-BSCEEEEETTTCCEEEEECC----
T ss_pred             cccccCCCCcEEEeCCCCCcce--eeeeEeeCCCCCcEEEEEEC-CCCCEEEEEe-CCeEEEEEecccceEeeecccccc
Confidence            3456778889999997766532  22223334799999999999 7999999987 8999999999887765542     


Q ss_pred             -----------eccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC
Q psy8152          83 -----------VSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN  149 (444)
Q Consensus        83 -----------~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  149 (444)
                                 ...|...|.+  ++|++++|++|+.||.|++|+...++.+....+|...|.+++|++++..+++++.++
T Consensus       106 ~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~  185 (388)
T d1erja_         106 NKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR  185 (388)
T ss_dssp             -------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccce
Confidence                       1234555655  468999999999999999999999998888888999999999999999999999999


Q ss_pred             eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe-cCCCEEEEEeCCceEEEEEcCCCCCccceEEE
Q psy8152         150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV  228 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  228 (444)
                      .+++||+.+.........+..                   ..++.+. +++++|++++.|+.|++|++.   ....+..+
T Consensus       186 ~i~~~d~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~~~d~~i~i~~~~---~~~~~~~~  243 (388)
T d1erja_         186 TVRIWDLRTGQCSLTLSIEDG-------------------VTTVAVSPGDGKYIAAGSLDRAVRVWDSE---TGFLVERL  243 (388)
T ss_dssp             EEEEEETTTTEEEEEEECSSC-------------------EEEEEECSTTCCEEEEEETTSCEEEEETT---TCCEEEEE
T ss_pred             eeeeeeccccccccccccccc-------------------cccccccCCCCCeEEEEcCCCeEEEeecc---cCccceee
Confidence            999999999887776665554                   4555555 467999999999999999998   54444433


Q ss_pred             -------eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc------------ceeEeccccCceeEEEecCCCCE
Q psy8152         229 -------DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK------------PCYKYKGFAGCVKDIACPLNENL  289 (444)
Q Consensus       229 -------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------------~~~~~~~h~~~i~~~~~s~~~~~  289 (444)
                             .+|...|.+++|+|++++|++++.||.|++||++. ..            .......|...|++++|+|++++
T Consensus       244 ~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  322 (388)
T d1erja_         244 DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN-ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY  322 (388)
T ss_dssp             C------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------------CEEEEEECCSSCEEEEEECGGGCE
T ss_pred             ccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccC-CccccccccccccceeeecccccceEEEEEECCCCCE
Confidence                   35788999999999999999999999999999976 32            33445578899999999999999


Q ss_pred             EEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCC--CcccccchhhhhccccccCCCccccCCC
Q psy8152         290 ILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSD--FSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      |++|+.||.|++||+.+++++.++. |.+.|.++++...  |+     |++.+++|++.||+|+||+++
T Consensus       323 l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~s-----pd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         323 ILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLG-----PEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTC-----TTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccC-----CCCCEEEEEeCCCEEEEEeee
Confidence            9999999999999999999998886 8999999998653  44     778899999999999999875

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-42  Score=312.65  Aligned_cols=273  Identities=12%  Similarity=0.214  Sum_probs=233.8

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+ +|.|+||++..... ...+......+|.+.|++++|+ |++++|++|+.||.|++|++...........
T Consensus        61 ~~g~~latg~-dg~V~iWd~~~~~~-~~~~~~~~~~~h~~~I~~v~~s-~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~  137 (337)
T d1gxra_          61 NPTRHVYTGG-KGCVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAEL  137 (337)
T ss_dssp             SSSSEEEEEC-BSEEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEEC-TTSSEEEEEESSSEEEEEECCCC--EEEEEE
T ss_pred             CCCCEEEEEE-CCEEEEEEccCCcc-cceeEEeeecCCCCcEEEEEEc-CCCCEEEEeeccccccccccccccccccccc
Confidence            4667888887 89999999987654 2223333334899999999999 7999999999999999999876554444444


Q ss_pred             ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      ..|...+..  ++|++.++++++.++.|++|++.++++......|...|.+++|++++..+++++.|+.|++||+++++.
T Consensus       138 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~  217 (337)
T d1gxra_         138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ  217 (337)
T ss_dssp             ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence            566666654  578899999999999999999999988877888999999999999999999999999999999999988


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+.. ..                  .|++++|+|++++|++++.++.|++||++   .... .....|...|++++|+
T Consensus       218 ~~~~~~-~~------------------~i~~l~~~~~~~~l~~~~~d~~i~i~d~~---~~~~-~~~~~~~~~i~~v~~s  274 (337)
T d1gxra_         218 LQQHDF-TS------------------QIFSLGYCPTGEWLAVGMESSNVEVLHVN---KPDK-YQLHLHESCVLSLKFA  274 (337)
T ss_dssp             EEEEEC-SS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---SSCE-EEECCCSSCEEEEEEC
T ss_pred             eccccc-cc------------------ceEEEEEcccccccceecccccccccccc---cccc-ccccccccccceEEEC
Confidence            776543 33                  59999999999999999999999999999   4433 4567889999999999


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      |++++|++++.||.|++||+.+ ++++..+. |...|++++|+|++++|++|+.||+|+||++
T Consensus       275 ~~g~~l~s~s~Dg~i~iwd~~~-~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         275 YCGKWFVSTGKDNLLNAWRTPY-GASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             TTSSEEEEEETTSEEEEEETTT-CCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCCCEEEEEeCCCeEEEEECCC-CCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            9999999999999999999999 88888765 7889999999999999999999999999996

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-42  Score=310.19  Aligned_cols=280  Identities=15%  Similarity=0.242  Sum_probs=258.3

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|.++|++|+|+ |++++|++|+.||+|+|||+.+++++..+.  +|...|.++  ++++.+++++..++.+.+|+....
T Consensus        15 GH~~~I~~l~~s-p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (317)
T d1vyhc1          15 GHRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF   91 (317)
T ss_dssp             CCSSCEEEEEEC-SSSSEEEEEESSSCEEEEETTTCCCCEEEC--CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred             CCCCCeEEEEEc-CCCCEEEEEeCCCeEEEEECCCCCEEEEEe--CCCCcEEEEeeeccccccccccccccccccccccc
Confidence            899999999999 799999999999999999999999988875  667777665  678899999999999999999888


Q ss_pred             CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      +....+..|...+.++.|+|+++.+++++.|+.+++|++++++.+..+..+..                  .+.+++|+|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~  153 (317)
T d1vyhc1          92 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE------------------WVRMVRPNQ  153 (317)
T ss_dssp             CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS------------------CEEEEEECT
T ss_pred             ccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCC------------------cceeeeccc
Confidence            88777888999999999999999999999999999999999999988887777                  799999999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC--------------------CEEEEEcCCCcEE
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS--------------------HYVIVGSTTGDMM  257 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------~~l~~~~~dg~i~  257 (444)
                      ++.+|++++.|+.|++|++.   ....+..+..|...+.+++|+|++                    .++++++.|+.|+
T Consensus       154 ~~~~l~~~~~d~~v~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  230 (317)
T d1vyhc1         154 DGTLIASCSNDQTVRVWVVA---TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK  230 (317)
T ss_dssp             TSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred             CCCEEEEEeCCCeEEEEeec---cceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEE
Confidence            99999999999999999999   778888889999999999998753                    4788999999999


Q ss_pred             EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchh
Q psy8152         258 AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKK  336 (444)
Q Consensus       258 iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~  336 (444)
                      +|++++ ++++.++.+|...|++++|+|++++|++++.||.|+|||+.+++++..+. |..+|++++|+++         
T Consensus       231 ~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~---------  300 (317)
T d1vyhc1         231 MWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT---------  300 (317)
T ss_dssp             EEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS---------
T ss_pred             EEECCC-CcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCC---------
Confidence            999999 99999999999999999999999999999999999999999999998886 8899999998754         


Q ss_pred             hhhccccccCCCccccC
Q psy8152         337 EEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       337 ~~~~~s~~~d~~i~~W~  353 (444)
                      +.++++++.|++|+||+
T Consensus       301 ~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         301 APYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SSCEEEEETTSEEEEEC
T ss_pred             CCEEEEEeCCCeEEEeC
Confidence            57899999999999996

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.1e-42  Score=307.95  Aligned_cols=279  Identities=12%  Similarity=0.096  Sum_probs=240.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      .+++.+.+++++ |+++.|+.+. ++.|.+|++.+......+.  +|...|.++  +|++++|++|+.||+|++|++.++
T Consensus        15 ~~r~~~~~~a~~-~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~--~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~   90 (311)
T d1nr0a1          15 TARGTAVVLGNT-PAGDKIQYCN-GTSVYTVPVGSLTDTEIYT--EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT   90 (311)
T ss_dssp             CCTTCCCCCEEC-TTSSEEEEEE-TTEEEEEETTCSSCCEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST
T ss_pred             CCCCCeEEEEEc-CCCCEEEEEe-CCEEEEEECCCCceeEEEc--CCCCCEEEEEEeCCCCeEeccccCceEeeeeeecc
Confidence            456677889999 7999998886 5789999999988888875  666666654  789999999999999999999887


Q ss_pred             Cccc--cccccCCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         118 PDQW--TNFNVGPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       118 ~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      ....  .+..|..+|.+++|+|++++|++++.  +..+++|++.+++....+..|..                  .|+++
T Consensus        91 ~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~------------------~v~~v  152 (311)
T d1nr0a1          91 THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR------------------AMNSV  152 (311)
T ss_dssp             TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSS------------------CEEEE
T ss_pred             ccccccccccccCcccccccccccccccccccccccccccccccccccccccccccc------------------ccccc
Confidence            6543  35668999999999999999999886  45699999999988888887777                  79999


Q ss_pred             EEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152         194 SFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       194 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  272 (444)
                      +|+|+++ .|++|+.|+.|++||++   ..+....+..|..+|++++|+|++++|++++.|+.|++|++.. +..+..+.
T Consensus       153 ~~~~~~~~~l~sgs~d~~i~i~d~~---~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~  228 (311)
T d1nr0a1         153 DFKPSRPFRIISGSDDNTVAIFEGP---PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFE  228 (311)
T ss_dssp             EECSSSSCEEEEEETTSCEEEEETT---TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECB
T ss_pred             cccccceeeeccccccccccccccc---ccccccccccccccccccccCcccccccccccccccccccccc-cccccccc
Confidence            9999986 58889999999999999   7888888999999999999999999999999999999999998 77776654


Q ss_pred             -------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc----eeEEEEcCCCcccccchhhhhcc
Q psy8152         273 -------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR----LTSILVRSDFSLENETKKEEQEH  341 (444)
Q Consensus       273 -------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~  341 (444)
                             +|...|++++|+|++++|++|+.||.|+|||+.+++++..+.....    +.++.|.           +..++
T Consensus       229 ~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~-----------~~~l~  297 (311)
T d1nr0a1         229 DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT-----------KQALV  297 (311)
T ss_dssp             CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC-----------SSCEE
T ss_pred             ccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEec-----------CCEEE
Confidence                   5889999999999999999999999999999999999988763332    3334332           35688


Q ss_pred             ccccCCCccccCCC
Q psy8152         342 SEEKGDSDEKYDPE  355 (444)
Q Consensus       342 s~~~d~~i~~W~~~  355 (444)
                      +++.||.|++||++
T Consensus       298 s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         298 SISANGFINFVNPE  311 (311)
T ss_dssp             EEETTCCEEEEETT
T ss_pred             EEECCCEEEEEeCC
Confidence            99999999999863

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.1e-40  Score=296.74  Aligned_cols=269  Identities=9%  Similarity=0.034  Sum_probs=226.4

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      +++.|+.+. ++.|.+|++.+... .   ..+.  +|...|++++|+ |++++|++|+.||+|+||++.++.........
T Consensus        28 ~g~~l~~~~-~~~v~i~~~~~~~~-~---~~~~--~H~~~v~~~~~s-p~g~~latg~~dg~i~iwd~~~~~~~~~~~~~   99 (311)
T d1nr0a1          28 AGDKIQYCN-GTSVYTVPVGSLTD-T---EIYT--EHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTTQTTHILKTTIP   99 (311)
T ss_dssp             TSSEEEEEE-TTEEEEEETTCSSC-C---EEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEESSSTTCCEEEEEE
T ss_pred             CCCEEEEEe-CCEEEEEECCCCce-e---EEEc--CCCCCEEEEEEe-CCCCeEeccccCceEeeeeeeccccccccccc
Confidence            445666654 56799999987764 1   2222  899999999999 79999999999999999999988776555556


Q ss_pred             cccccEEEE--EeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCE-EEEeeCCCeEEEEEcCCc
Q psy8152          85 FGEGDIVGV--SRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNI-IATGGKENDLKLWDLNTT  159 (444)
Q Consensus        85 ~~~~~v~~~--s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~  159 (444)
                      .|..+|.++  +|++++|++++.  +..+++|++.+++....+..|...|++++|+|++.+ |++|+.|+.|++||++++
T Consensus       100 ~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~  179 (311)
T d1nr0a1         100 VFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF  179 (311)
T ss_dssp             CSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB
T ss_pred             cccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccccc
Confidence            778888765  678899998876  456999999999988888889999999999998774 888999999999999999


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-------eCCC
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-------DIPD  232 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~~  232 (444)
                      +....+..|..                  .|++++|+|++++|++++.|+.|++||+.   ....+..+       .+|.
T Consensus       180 ~~~~~~~~~~~------------------~i~~v~~~p~~~~l~~~~~d~~v~~~d~~---~~~~~~~~~~~~~~~~~h~  238 (311)
T d1nr0a1         180 KFKSTFGEHTK------------------FVHSVRYNPDGSLFASTGGDGTIVLYNGV---DGTKTGVFEDDSLKNVAHS  238 (311)
T ss_dssp             EEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TCCEEEECBCTTSSSCSSS
T ss_pred             ccccccccccc------------------cccccccCccccccccccccccccccccc---ccccccccccccccccccc
Confidence            99988888777                  79999999999999999999999999998   44444443       3578


Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC---ceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG---CVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~---~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      ..|++++|+|++++|++|+.||.|+|||+++ ++++.++..|..   .+.++.|  ++.+|++++.||.|++||..
T Consensus       239 ~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t-~~~~~~l~~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         239 GSVFGLTWSPDGTKIASASADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred             ccccccccCCCCCEEEEEeCCCeEEEEECCC-CcEEEEEECCCCccceEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence            8999999999999999999999999999999 999999986643   3444454  56689999999999999963

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.7e-40  Score=293.30  Aligned_cols=287  Identities=11%  Similarity=0.112  Sum_probs=247.9

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.||.|+||++.+++.    +..+.  +|...|++++|+ +++.+++++..++.+.+|+....+....+. 
T Consensus        27 p~~~~l~s~s~Dg~i~iWd~~~~~~----~~~~~--~h~~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   98 (317)
T d1vyhc1          27 PVFSVMVSASEDATIKVWDYETGDF----ERTLK--GHTDSVQDISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMH-   98 (317)
T ss_dssp             SSSSEEEEEESSSCEEEEETTTCCC----CEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCCCEEETTSSCEEECCC-
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCE----EEEEe--CCCCcEEEEeee-cccccccccccccccccccccccccccccc-
Confidence            3567899999999999999988875    23333  799999999999 799999999999999999998877776665 


Q ss_pred             ccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          84 SFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        84 ~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                       .|...+  ..++++++.+++++.|+.+++|++.+++....+..|...+.+++|+|++.+|++++.|+.|++|++.+++.
T Consensus        99 -~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~  177 (317)
T d1vyhc1          99 -GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC  177 (317)
T ss_dssp             -CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred             -cccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeecccee
Confidence             444444  45578999999999999999999999998888888999999999999999999999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccC--ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRR--PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT  239 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~  239 (444)
                      +..+..+...+..+.+.|+......  ........+...+.++++++.|+.|++|+++   ..+++.++.+|...|.+++
T Consensus       178 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~---~~~~~~~~~~~~~~v~~~~  254 (317)
T d1vyhc1         178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS---TGMCLMTLVGHDNWVRGVL  254 (317)
T ss_dssp             EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEE
T ss_pred             eEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECC---CCcEEEEEeCCCCCEEEEE
Confidence            9999988888888888776532221  1223334445567899999999999999999   8889999999999999999


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      |+|++++|++|+.||.|+|||+.+ ++++.++.+|..+|++++|+|++++|++|+.||+|+|||
T Consensus       255 ~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         255 FHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             ECSSSSCEEEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             ECCCCCEEEEEECCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            999999999999999999999999 999999999999999999999999999999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.5e-41  Score=307.81  Aligned_cols=289  Identities=13%  Similarity=0.133  Sum_probs=231.4

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      ..+|+|++|+ |++.+||+|+.|+.|+||++.+++......+.+|..+|.++  +|++++|++++.|++|+||++.++..
T Consensus         7 ~~pIt~~~~s-~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           7 VEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             SSCCCEEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCeEEEEEC-CCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            5789999999 79999999999999999999888765555556888888766  68999999999999999999987654


Q ss_pred             cc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee----eecccceeeEeeeCCCcccccCccceeEE
Q psy8152         120 QW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS----AKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       120 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      ..  .+..|...|.+++|+|+++.|++++.++.|++|++........    ...+..                  .|+++
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~------------------~v~~v  147 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS------------------TVLSL  147 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS------------------CEEEE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeeccccccccccccccccc------------------ccccc
Confidence            32  4556889999999999999999999999999999877543322    222333                  79999


Q ss_pred             EEecCCCEEEEEeCCceEEEEEcCCCC---------------CccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEE
Q psy8152         194 SFLPNSDKVAVCSKQGYVRVYDPKITT---------------QRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMA  258 (444)
Q Consensus       194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  258 (444)
                      +|+|++++|++|+.|++|++|++....               ....+.....|...|.+++|+|++++|++++.|+.|++
T Consensus       148 ~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~i  227 (371)
T d1k8kc_         148 DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL  227 (371)
T ss_dssp             EECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred             cccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceE
Confidence            999999999999999999999986210               12345556678889999999999999999999999999


Q ss_pred             EEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC--CceEEE------------------------
Q psy8152         259 VDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS--KKLLRK------------------------  312 (444)
Q Consensus       259 wd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~--~~~~~~------------------------  312 (444)
                      ||+.+ ++++..+..|..+|++++|+|++++|++| .|+.+++|....  +.+...                        
T Consensus       228 wd~~~-~~~~~~~~~~~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (371)
T d1k8kc_         228 ADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD  305 (371)
T ss_dssp             EEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCC
T ss_pred             Eeeec-ccceeeeecccccceeeeecCCCCEEEEE-cCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEeccc
Confidence            99999 99999999999999999999999877764 577776665432  211100                        


Q ss_pred             ----------------eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152         313 ----------------DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       313 ----------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~  356 (444)
                                      ..|.+.|+++++.+...     .....++|++.||.|+||++..
T Consensus       306 ~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~-----~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         306 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGK-----AKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             CCC---------CCCSSSSSSCEEEEEEEESTT-----TSCSEEEEEETTSEEEEEEHHH
T ss_pred             ceeEEeccccccceecccccCCEEEEEEeCCCC-----cceEEEEEEcCCCeEEEEeCCc
Confidence                            01556788887765422     1124588999999999999864

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-38  Score=288.19  Aligned_cols=279  Identities=14%  Similarity=0.155  Sum_probs=241.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|.++|++|+|+ |++.+|++|+.||+|+|||+.+++.+..+.  .|..+|.++  +|++.++++++.++.+++|+....
T Consensus        53 GH~~~I~~l~~s-~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~  129 (340)
T d1tbga_          53 GHLAKIYAMHWG-TDSRLLVSASQDGKLIIWDSYTTNKVHAIP--LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR  129 (340)
T ss_dssp             CCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEEE--CSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred             CCCCCEEEEEEC-CCCCEEEEEECCCceeeeecccceeEEEEe--cccccEEeeEeeccceeeeeecccceeeccccccc
Confidence            899999999999 799999999999999999999999888876  556666554  688999999999999999997765


Q ss_pred             Cccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152         118 PDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI  193 (444)
Q Consensus       118 ~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (444)
                      ....    .+..|.......... ....++....+.....+................                  .+..+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~  190 (340)
T d1tbga_         130 EGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG------------------DVMSL  190 (340)
T ss_dssp             CSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSS------------------CEEEE
T ss_pred             ccccccceecccccccccccccc-cccccccccccccccccccccccccccccccce------------------eEeee
Confidence            4332    344456555555444 556788888899999999888766666555555                  68889


Q ss_pred             EEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-
Q psy8152         194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-  272 (444)
Q Consensus       194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-  272 (444)
                      .+.+...++++++.|+.|++||++   ...++..+.+|...|++++|+|++++|++|+.||.|++|+++. ...+..+. 
T Consensus       191 ~~~~~~~~~~~~~~d~~v~i~d~~---~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~-~~~~~~~~~  266 (340)
T d1tbga_         191 SLAPDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSH  266 (340)
T ss_dssp             EECTTSSEEEEEETTTEEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC
T ss_pred             ccccccceeEEeecCceEEEEECC---CCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc-ccccccccc
Confidence            999999999999999999999999   8889999999999999999999999999999999999999998 77776664 


Q ss_pred             -cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152         273 -GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE  350 (444)
Q Consensus       273 -~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~  350 (444)
                       .|...|++++|+|++++|++|+.||.|++||+.+++++..+. |..+|++++|+++         +.+++|++.||.|+
T Consensus       267 ~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d---------~~~l~s~s~Dg~v~  337 (340)
T d1tbga_         267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD---------GMAVATGSWDSFLK  337 (340)
T ss_dssp             TTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT---------SSCEEEEETTSCEE
T ss_pred             ccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCC---------CCEEEEEccCCEEE
Confidence             567789999999999999999999999999999999998886 8999999998744         57899999999999


Q ss_pred             ccC
Q psy8152         351 KYD  353 (444)
Q Consensus       351 ~W~  353 (444)
                      ||+
T Consensus       338 iWd  340 (340)
T d1tbga_         338 IWN  340 (340)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-38  Score=293.79  Aligned_cols=285  Identities=14%  Similarity=0.194  Sum_probs=226.7

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCcccee------------eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEe
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIK------------NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYD   71 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~   71 (444)
                      +++.+|++|+ |+.|+||++.+++....            .+.......|...|++++|+ |++++|++|+.||.|++|+
T Consensus        72 ~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s-~~~~~l~s~~~dg~v~i~~  149 (388)
T d1erja_          72 NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS-PDGKFLATGAEDRLIRIWD  149 (388)
T ss_dssp             TTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC-TTSSEEEEEETTSCEEEEE
T ss_pred             CCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEEC-CCCCcceeccccccccccc
Confidence            4567888886 89999999988764211            01111222688899999999 7999999999999999999


Q ss_pred             CCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCC
Q psy8152          72 TDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKE  148 (444)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  148 (444)
                      ...++....+.  +|...|.++  ++++..+++++.++.|++|++.+..... ...+.....++.+++ ++++|++|+.|
T Consensus       150 ~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~d  226 (388)
T d1erja_         150 IENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL-TLSIEDGVTTVAVSPGDGKYIAAGSLD  226 (388)
T ss_dssp             TTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECSTTCCEEEEEETT
T ss_pred             ccccccccccc--cccccccccccccccccccccccceeeeeeecccccccc-ccccccccccccccCCCCCeEEEEcCC
Confidence            99888887764  667777665  5778899999999999999999887775 444555566666666 88999999999


Q ss_pred             CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC--------
Q psy8152         149 NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT--------  220 (444)
Q Consensus       149 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--------  220 (444)
                      +.|++|++.++..+..+.....           ....+...|++++|+|++++|++++.|+.|++||++...        
T Consensus       227 ~~i~i~~~~~~~~~~~~~~~~~-----------~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~  295 (388)
T d1erja_         227 RAVRVWDSETGFLVERLDSENE-----------SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP  295 (388)
T ss_dssp             SCEEEEETTTCCEEEEEC-----------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred             CeEEEeecccCccceeeccccc-----------cccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccc
Confidence            9999999999887766543211           011123479999999999999999999999999997211        


Q ss_pred             -CccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe------cCCCCEEEEE
Q psy8152         221 -QRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC------PLNENLILSV  293 (444)
Q Consensus       221 -~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~------s~~~~~l~s~  293 (444)
                       ..........|...|.+++|+|++++|++|+.||.|++||+++ ++++.++++|.+.|+++++      +|++++||+|
T Consensus       296 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~-~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~  374 (388)
T d1erja_         296 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG  374 (388)
T ss_dssp             ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred             cccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCC-CcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEE
Confidence             1223445667889999999999999999999999999999999 9999999999999999875      6788999999


Q ss_pred             ECCCcEEEEEcC
Q psy8152         294 SLDRHFRVHDFH  305 (444)
Q Consensus       294 ~~dg~i~vw~~~  305 (444)
                      +.||+|+||+++
T Consensus       375 s~Dg~I~iW~~~  386 (388)
T d1erja_         375 SGDCKARIWKYK  386 (388)
T ss_dssp             ETTSEEEEEEEE
T ss_pred             eCCCEEEEEeee
Confidence            999999999974

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.4e-38  Score=291.00  Aligned_cols=294  Identities=13%  Similarity=0.148  Sum_probs=222.2

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+||+|+.+|.|+||++.+++.  ..+..+.  +|.++|++|+|+ |++++|++|+.|++|+||++.++.....+..
T Consensus        17 ~dg~~la~~~~~~~i~iw~~~~~~~--~~~~~l~--gH~~~V~~l~fs-p~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~   91 (371)
T d1k8kc_          17 KDRTQIAICPNNHEVHIYEKSGNKW--VQVHELK--EHNGQVTGVDWA-PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI   91 (371)
T ss_dssp             TTSSEEEEECSSSEEEEEEEETTEE--EEEEEEE--CCSSCEEEEEEE-TTTTEEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCCE--EEEEEec--CCCCCEEEEEEC-CCCCEEEEEECCCeEEEEeeccccccccccc
Confidence            4678999999999999999987762  2233333  899999999999 7999999999999999999988877666666


Q ss_pred             ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152          84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN  157 (444)
Q Consensus        84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~  157 (444)
                      ..|...|.++  +|++++|++++.++.|++|++.......    ....|...|.+++|+|++++|++|+.|+.|++|++.
T Consensus        92 ~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~  171 (371)
T d1k8kc_          92 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY  171 (371)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred             ccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeec
Confidence            6777777665  6899999999999999999988765432    344588999999999999999999999999999987


Q ss_pred             CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      ......................-.....+...|.+++|+|++++|++++.|+.|++||+.   ....+..+..|..+|.+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~s  248 (371)
T d1k8kc_         172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD---KKMAVATLASETLPLLA  248 (371)
T ss_dssp             CTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG---GTTEEEEEECSSCCEEE
T ss_pred             cCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeee---cccceeeeeccccccee
Confidence            533111100000000000000000001123479999999999999999999999999999   78888999999999999


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCC-Ccce---------------------------------------eEeccccCc
Q psy8152         238 ITTTNQSHYVIVGSTTGDMMAVDLRGK-GKPC---------------------------------------YKYKGFAGC  277 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~---------------------------------------~~~~~h~~~  277 (444)
                      ++|+|++++|++|. |+.+++|..... ....                                       .....|.+.
T Consensus       249 ~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~  327 (371)
T d1k8kc_         249 VTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS  327 (371)
T ss_dssp             EEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSC
T ss_pred             eeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCC
Confidence            99999998887765 677777654320 0000                                       000138889


Q ss_pred             eeEEEecCCC----CEEEEEECCCcEEEEEcCC
Q psy8152         278 VKDIACPLNE----NLILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       278 i~~~~~s~~~----~~l~s~~~dg~i~vw~~~~  306 (444)
                      |+++++.+.+    ..|+|++.||.|+||++++
T Consensus       328 I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         328 VSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             EEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             EEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence            9999997754    3689999999999999865

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.9e-38  Score=280.59  Aligned_cols=276  Identities=11%  Similarity=0.085  Sum_probs=220.1

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|..+|++|+|+ |++++|++|+.||+|++||+.+++....+. ..|...|.++  +|++. +++++.|+.+++|++...
T Consensus        10 GH~~~V~~l~~s-~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~-~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~~   86 (299)
T d1nr0a2          10 GHNKAITALSSS-ADGKTLFSADAEGHINSWDISTGISNRVFP-DVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAGGS   86 (299)
T ss_dssp             CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEECSS-CSCSSCEEEEEECTTSC-EEEEETTTEEEEECSSSS
T ss_pred             CCCCCcEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEc-CCCCCcEEEEEeeccce-eecccceeeEEEeccCCc
Confidence            999999999999 799999999999999999999998887764 3667777766  56665 566778999999998754


Q ss_pred             Cccc---cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         118 PDQW---TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       118 ~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ....   ....+...+.+++|+|++.++++++ ++.+++|+.....   ..... .                  .+.+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~~---~~~~~-~------------------~~~~~~  143 (299)
T d1nr0a2          87 GVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKLT---EVPIS-Y------------------NSSCVA  143 (299)
T ss_dssp             SSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEEE---EEECS-S------------------CEEEEE
T ss_pred             cccccccccccccccccccccccccccccccc-ccccccccccccc---ccccc-c------------------cccccc
Confidence            3321   2334778899999999998777665 5789999864322   11111 2                  478899


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccce-EEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce---eE
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPV-LKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC---YK  270 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~  270 (444)
                      |+|++++|++++.|+.|++||++   ..... .....|...|++++|+|++++|++++.++.|++||+.+ +..+   ..
T Consensus       144 ~s~~~~~l~~g~~dg~i~~~d~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~-~~~~~~~~~  219 (299)
T d1nr0a2         144 LSNDKQFVAVGGQDSKVHVYKLS---GASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN-NFELAHTNS  219 (299)
T ss_dssp             ECTTSCEEEEEETTSEEEEEEEE---TTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG-TTEESCCCC
T ss_pred             ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence            99999999999999999999998   33322 23446888999999999999999999999999999987 5544   44


Q ss_pred             eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152         271 YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSEEKG  346 (444)
Q Consensus       271 ~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d  346 (444)
                      +.+|..+|++++|+|++++|++|+.||.|++|++.++.......    +...+.++.+.+          +.++++++.|
T Consensus       220 ~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~l~s~s~D  289 (299)
T d1nr0a2         220 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN----------ETTIVSAGQD  289 (299)
T ss_dssp             CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEE----------TTEEEEEETT
T ss_pred             ccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECC----------CCEEEEEeCC
Confidence            56799999999999999999999999999999998865443332    334566665532          3689999999


Q ss_pred             CCccccCCC
Q psy8152         347 DSDEKYDPE  355 (444)
Q Consensus       347 ~~i~~W~~~  355 (444)
                      +.|++|++.
T Consensus       290 ~~i~iWdl~  298 (299)
T d1nr0a2         290 SNIKFWNVP  298 (299)
T ss_dssp             SCEEEEECC
T ss_pred             CEEEEEecc
Confidence            999999973

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5e-38  Score=285.84  Aligned_cols=302  Identities=12%  Similarity=0.195  Sum_probs=238.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++++|++|+.||.|+||++.+++.    +..+.  +|.++|++|+|+ + +++|++|+.|+.|++|++...+........
T Consensus        22 ~~~~l~tgs~Dg~i~vWd~~~~~~----~~~l~--~H~~~V~~l~~s-~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~   93 (355)
T d1nexb2          22 EDNYVITGADDKMIRVYDSINKKF----LLQLS--GHDGGVWALKYA-H-GGILVSGSTDRTVRVWDIKKGCCTHVFEGH   93 (355)
T ss_dssp             ETTEEEEEETTTEEEEEETTTTEE----EEEEE--CCSSCEEEEEEE-T-TTEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcE----EEEEE--CCCCCEEEEEEc-C-CCEEEEEecccccccccccccccccccccc
Confidence            467899999999999999988774    23333  899999999999 4 568999999999999999988777665443


Q ss_pred             cccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccc-----------------------cccCCCeEEEEEeccC
Q psy8152          85 FGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTN-----------------------FNVGPQLECMKHNKHS  139 (444)
Q Consensus        85 ~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-----------------------~~~~~~v~~~~~~~~~  139 (444)
                      .+...+..  ..+++.++++++.|+.|++|++.+.......                       ..|...  ...+.+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~  171 (355)
T d1nexb2          94 NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS--VRTVSGHG  171 (355)
T ss_dssp             SSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSC--EEEEEEET
T ss_pred             cccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccc--cccccccc
Confidence            33333333  3567889999999999999998876543211                       011222  23445578


Q ss_pred             CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC
Q psy8152         140 NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT  219 (444)
Q Consensus       140 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~  219 (444)
                      ++++++..|+.|++||+.+++.+.....+..                  .+.++.|+|++.++++++.|+.|++|+++  
T Consensus       172 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~d~~i~i~d~~--  231 (355)
T d1nexb2         172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTD------------------RIYSTIYDHERKRCISASMDTTIRIWDLE--  231 (355)
T ss_dssp             TEEEEEETTSCEEEEETTTTEEEEEECCCSS------------------CEEEEEEETTTTEEEEEETTSCEEEEETT--
T ss_pred             ceeeeecccceeeeeecccccceeeeecccc------------------ccccccccccceeeecccccceEEeeecc--
Confidence            9999999999999999999998888776666                  68999999999999999999999999999  


Q ss_pred             CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE-EecCCCCEEEEEECCCc
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI-ACPLNENLILSVSLDRH  298 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~-~~s~~~~~l~s~~~dg~  298 (444)
                       ....+..+.+|...|.+++|+  +++|++|+.||.|++||+++ ....  +..|...+.++ .+++++.+|++| .|+.
T Consensus       232 -~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~-~~~~--~~~~~~~~~~~~~~~~~~~~l~~g-~d~~  304 (355)
T d1nexb2         232 -NGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRK--FSYHHTNLSAITTFYVSDNILVSG-SENQ  304 (355)
T ss_dssp             -TCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTT-CCEE--EEEECTTCCCCCEEEECSSEEEEE-ETTE
T ss_pred             -ccccccccccccccccccccc--cceeeeeecccccccccccc-ccee--cccccCCceEEEEEcCCCCEEEEE-eCCE
Confidence             888889999999999999996  46999999999999999987 5543  44566666665 456677766665 5899


Q ss_pred             EEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152         299 FRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD  353 (444)
Q Consensus       299 i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~  353 (444)
                      |+|||+++++++...  .|..+|.+++|+++          .++++++.||++.||.
T Consensus       305 i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~----------~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         305 FNIYNLRSGKLVHANILKDADQIWSVNFKGK----------TLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             EEEEETTTCCBCCSCTTTTCSEEEEEEEETT----------EEEEEEESSSCEEEEE
T ss_pred             EEEEECCCCCEEEEEecCCCCCEEEEEEcCC----------eEEEEEECCCcEEEEE
Confidence            999999999988653  37788999998754          4678889999977764

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3e-37  Score=279.39  Aligned_cols=271  Identities=13%  Similarity=0.162  Sum_probs=233.6

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc--e
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN--T   81 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~--~   81 (444)
                      +++.+|++|+.||.|+||++.+++.    +..+.  .|...|++++|+ |++.+|++|+.|+.+++|+.........  .
T Consensus        65 ~~~~~l~sgs~Dg~v~iWd~~~~~~----~~~~~--~~~~~v~~v~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~  137 (340)
T d1tbga_          65 TDSRLLVSASQDGKLIIWDSYTTNK----VHAIP--LRSSWVMTCAYA-PSGNYVACGGLDNICSIYNLKTREGNVRVSR  137 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTTEE----EEEEE--CSCSCEEEEEEC-TTSSEEEEEETTCCEEEEESSSSCSCCCEEE
T ss_pred             CCCCEEEEEECCCceeeeeccccee----EEEEe--cccccEEeeEee-ccceeeeeecccceeecccccccccccccce
Confidence            4678999999999999999988874    22233  789999999999 7999999999999999999875543322  2


Q ss_pred             eeccccccEEEE-EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          82 DVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        82 ~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      ...+|....... ...+..++....+.....+.............+...+....+.+...++++|+.|+.|++||+++++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~  217 (340)
T d1tbga_         138 ELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM  217 (340)
T ss_dssp             EECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred             ecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCc
Confidence            233555555444 4456778888899999999988777666666788889999999999999999999999999999999


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE--eCCCCCeeEE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV--DIPDVALSCI  238 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~i~~~  238 (444)
                      ++..+..|..                  .|++++|+|++++|++|+.|+.|++|+++   ....+..+  ..+...|.++
T Consensus       218 ~~~~~~~h~~------------------~i~~v~~~p~~~~l~s~s~d~~i~~~~~~---~~~~~~~~~~~~~~~~i~~~  276 (340)
T d1tbga_         218 CRQTFTGHES------------------DINAICFFPNGNAFATGSDDATCRLFDLR---ADQELMTYSHDNIICGITSV  276 (340)
T ss_dssp             EEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCTTCCSCEEEE
T ss_pred             EEEEEeCCCC------------------CeEEEEECCCCCEEEEEeCCCeEEEEeec---ccccccccccccccCceEEE
Confidence            9999888877                  79999999999999999999999999999   55555544  3566779999


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      +|+|++++|++|+.||.|++||+.+ ++++.++.+|.++|++++|+|++++|++|+.||+|+|||
T Consensus       277 ~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         277 SFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EECSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EECCCCCEEEEEECCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999999999999999999999999 999999999999999999999999999999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-35  Score=265.69  Aligned_cols=301  Identities=12%  Similarity=0.153  Sum_probs=244.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++++|++|+.||.|+||++.+++.    +..+.  +|...|++++|+ +  ++|++|+.|+.+++|+...........  
T Consensus        26 ~g~~l~sgs~Dg~i~vWd~~~~~~----~~~~~--~h~~~V~~v~~~-~--~~l~s~s~D~~~~~~~~~~~~~~~~~~--   94 (342)
T d2ovrb2          26 CGNRIVSGSDDNTLKVWSAVTGKC----LRTLV--GHTGGVWSSQMR-D--NIIISGSTDRTLKVWNAETGECIHTLY--   94 (342)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCCE----EEECC--CCSSCEEEEEEE-T--TEEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred             CCCEEEEEeCCCeEEEEECCCCCE----EEEEe--CCCCCEEEEEeC-C--Cccccceecccccccccccccceeccc--
Confidence            467899999999999999988874    23333  899999999999 3  599999999999999988766655443  


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      .+...+.........++.+..++.+.+|+..+++.......+...  ...+.+....+++++.++.|++|++...+.+..
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~  172 (342)
T d2ovrb2          95 GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA--VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT  172 (342)
T ss_dssp             CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSC--EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEE
T ss_pred             ccceeEeeeecccccccccccceeEEEeecccccceeeeeccccc--ceeeccccceeeeecCCCeEEEeecccceeeEE
Confidence            445666667777888999999999999999988877533333332  333445677899999999999999999988888


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS  244 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (444)
                      +..+..                  .+.  .+.+++.+|++++.||.|++||++   ...++..+..|...+.+++++  +
T Consensus       173 ~~~~~~------------------~~~--~~~~~~~~l~s~~~dg~i~~~d~~---~~~~~~~~~~~~~~v~~~~~~--~  227 (342)
T d2ovrb2         173 LQGHTN------------------RVY--SLQFDGIHVVSGSLDTSIRVWDVE---TGNCIHTLTGHQSLTSGMELK--D  227 (342)
T ss_dssp             ECCCSS------------------CEE--EEEECSSEEEEEETTSCEEEEETT---TCCEEEEECCCCSCEEEEEEE--T
T ss_pred             EcCccc------------------ccc--cccCCCCEEEEEeCCCeEEEeecc---cceeeeEecccccceeEEecC--C
Confidence            776654                  343  455578999999999999999999   788888999999989888776  4


Q ss_pred             CEEEEEcCCCcEEEEEcCCCCcceeEecc---ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee------c
Q psy8152         245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKG---FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY------M  315 (444)
Q Consensus       245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~------~  315 (444)
                      ++|++++.|+.|++||+.. .+....+..   |...+.++.++  ++++++|+.||+|+|||+.++++++.+.      |
T Consensus       228 ~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~  304 (342)
T d2ovrb2         228 NILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS  304 (342)
T ss_dssp             TEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGG
T ss_pred             CEEEEEcCCCEEEEEeccc-ccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCC
Confidence            6999999999999999998 887777764   55667777765  5699999999999999999999988764      4


Q ss_pred             CCceeEEEEcCCCcccccchhhhhccccccCCC----ccccCCC
Q psy8152         316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDS----DEKYDPE  355 (444)
Q Consensus       316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~----i~~W~~~  355 (444)
                      ...|++++|+++         +.++++++.||+    |++||+.
T Consensus       305 ~~~v~~v~~s~~---------~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         305 GGVVWRIRASNT---------KLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             TCEEEEEEECSS---------EEEEEEECSSSSSCCEEEEEECC
T ss_pred             CCCEEEEEECCC---------CCEEEEEeCCCCCeeEEEEEeCC
Confidence            567999998754         578999999986    8999876

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-35  Score=266.85  Aligned_cols=282  Identities=11%  Similarity=0.082  Sum_probs=222.6

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCC-eEEEEeCCCCccccceeecccc-ccEEEE--Ee--CCCeEEEEecCCcEEEEEcC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQ-KIKIYDTDFKNFNTNTDVSFGE-GDIVGV--SR--YDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~-~i~vw~~~~~~~~~~~~~~~~~-~~v~~~--s~--~~~~l~~~~~dg~i~iw~~~  115 (444)
                      ...+++++|+ |+++.|+.++.+. .|+.|+.............+|. ..|.++  +|  ++.+|++|+.||+|+||++.
T Consensus        17 ~~~~t~l~~~-~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~   95 (325)
T d1pgua1          17 RNFTTHLSYD-PTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT   95 (325)
T ss_dssp             TTCCCCCEEE-TTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred             CCCeEEEEEC-CCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeec
Confidence            4567899999 7899999887653 3566766554444444444653 456554  55  56799999999999999987


Q ss_pred             CCCccc--------cccccCCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152         116 TEPDQW--------TNFNVGPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR  185 (444)
Q Consensus       116 ~~~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (444)
                      .++...        .+..|..+|.+++|++++++|++++.  ++.+++|+..+++++..+.+|..               
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------------  160 (325)
T d1pgua1          96 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQ---------------  160 (325)
T ss_dssp             EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSS---------------
T ss_pred             CCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeeccc---------------
Confidence            665443        23357889999999999999887764  67899999999999999888877               


Q ss_pred             CccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEE---eCCCCCeeEEEEccC-CCEEEEEcCCCcEEEEE
Q psy8152         186 RPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKV---DIPDVALSCITTTNQ-SHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       186 ~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd  260 (444)
                         .|++++|+|++. ++++++.|+.|++|++.   ..+....+   ..|...|++++|+|+ +.+|++++.|+.|++||
T Consensus       161 ---~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~---~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd  234 (325)
T d1pgua1         161 ---RINACHLKQSRPMRSMTVGDDGSVVFYQGP---PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD  234 (325)
T ss_dssp             ---CEEEEEECSSSSCEEEEEETTTEEEEEETT---TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred             ---ccccccccccccceEEEeeccccccccccc---ccccceecccccCCCCccEEeeeccccceeccccccccceeeee
Confidence               799999999985 57789999999999998   44444443   456778999999996 68999999999999999


Q ss_pred             cCCCCcceeEeccccCceeEEEec---CCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCc--eeEEEEcCCCcccccc
Q psy8152         261 LRGKGKPCYKYKGFAGCVKDIACP---LNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSR--LTSILVRSDFSLENET  334 (444)
Q Consensus       261 ~~~~~~~~~~~~~h~~~i~~~~~s---~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~--i~~~~~~~~~~~~~~~  334 (444)
                      +++ ++++..+.+|..++.++.|+   |++++|++++.|+.|+|||+.+++++..+. +...  +..+++...       
T Consensus       235 ~~~-~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  306 (325)
T d1pgua1         235 GKS-GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-------  306 (325)
T ss_dssp             TTT-CCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-------
T ss_pred             ecc-ccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEEC-------
Confidence            999 99999999988887766665   789999999999999999999999988875 3333  334444321       


Q ss_pred             hhhhhccccccCCCccccCC
Q psy8152         335 KKEEQEHSEEKGDSDEKYDP  354 (444)
Q Consensus       335 ~~~~~~~s~~~d~~i~~W~~  354 (444)
                      + ..++++++.|+.|++|++
T Consensus       307 ~-~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         307 G-NGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             E-TTEEEEEETTSCEEEEET
T ss_pred             C-CCEEEEEECCCEEEEEEC
Confidence            1 246899999999999985

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-34  Score=257.95  Aligned_cols=270  Identities=10%  Similarity=0.146  Sum_probs=203.9

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-ee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN-TD   82 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-~~   82 (444)
                      +++.+|++|+.||.|++|++.+++..    ..+. ..|...|++++|+ |++. +++++.|+.+++|+......... ..
T Consensus        22 ~dg~~l~s~s~Dg~v~vWd~~~~~~~----~~~~-~~h~~~v~~v~~~-~~g~-~~~~~~d~~v~~~~~~~~~~~~~~~~   94 (299)
T d1nr0a2          22 ADGKTLFSADAEGHINSWDISTGISN----RVFP-DVHATMITGIKTT-SKGD-LFTVSWDDHLKVVPAGGSGVDSSKAV   94 (299)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCCEE----ECSS-CSCSSCEEEEEEC-TTSC-EEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCcEE----EEEc-CCCCCcEEEEEee-ccce-eecccceeeEEEeccCCccccccccc
Confidence            46789999999999999999887741    2221 2789999999999 6665 66777899999999865433221 11


Q ss_pred             eccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152          83 VSFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        83 ~~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~  160 (444)
                      ...+...+  .++++++++++++ .++.+++|+....  .  .......+.+++|+|++++|++|+.++.|++||+++++
T Consensus        95 ~~~~~~~~~~~~~s~~g~~~~~~-~~~~i~~~~~~~~--~--~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~  169 (299)
T d1nr0a2          95 ANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYSHGKL--T--EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS  169 (299)
T ss_dssp             EEECSSCEEEEEECTTSSCEEEE-ESSEEEEEETTEE--E--EEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE
T ss_pred             ccccccccccccccccccccccc-ccccccccccccc--c--cccccccccccccccccccccccccccccccccccccc
Confidence            12334444  4457788877765 4568999985432  2  22345568899999999999999999999999998766


Q ss_pred             eee-eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE
Q psy8152         161 NIF-SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT  239 (444)
Q Consensus       161 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~  239 (444)
                      ... ....|..                  +|++++|+|++++|++++.++.|++||+...........+..|..+|++++
T Consensus       170 ~~~~~~~~~~~------------------~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~  231 (299)
T d1nr0a2         170 VSEVKTIVHPA------------------EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVS  231 (299)
T ss_dssp             EEEEEEEECSS------------------CEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEE
T ss_pred             ccccccccccc------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            443 2233344                  699999999999999999999999999982222233445667889999999


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCCccee--Eeccc-cCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCY--KYKGF-AGCVKDIACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~h-~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      |+|++++|++|+.||.|++||+++ +....  ....| ...|.++.| +++++|++++.|++|++||+.
T Consensus       232 ~s~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         232 WSPDNVRLATGSLDNSVIVWNMNK-PSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETTC-TTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             ccccccceEEEcCCCEEEEEECCC-CCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            999999999999999999999987 54333  22333 456666655 567899999999999999984

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.3e-34  Score=260.38  Aligned_cols=298  Identities=15%  Similarity=0.148  Sum_probs=223.0

Q ss_pred             Ccccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCC
Q psy8152          40 TNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTE  117 (444)
Q Consensus        40 ~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~  117 (444)
                      +|...| +|+.|+   +++|++|+.||+|+|||+.+++++..+.  +|..+|.++.+ .+.+|++|+.|+.|++|++...
T Consensus        10 GH~~~vitc~~~~---~~~l~tgs~Dg~i~vWd~~~~~~~~~l~--~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~   84 (355)
T d1nexb2          10 GHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLS--GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKG   84 (355)
T ss_dssp             CCSSSCEEEEEEE---TTEEEEEETTTEEEEEETTTTEEEEEEE--CCSSCEEEEEEETTTEEEEEETTCCEEEEETTTT
T ss_pred             CcCCCcEEEEEEC---CCEEEEEeCCCeEEEEECCCCcEEEEEE--CCCCCEEEEEEcCCCEEEEEeccccccccccccc
Confidence            898875 666655   7899999999999999999999988875  77888887753 3578999999999999999988


Q ss_pred             Ccccccccc--CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc------cccCccc
Q psy8152         118 PDQWTNFNV--GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF------DLRRPVW  189 (444)
Q Consensus       118 ~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  189 (444)
                      +.......+  ...+....+.+++.++++++.|+.|++|++.+...+........... ....+...      ...+.  
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--  161 (355)
T d1nexb2          85 CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL-VFHTPEENPYFVGVLRGHM--  161 (355)
T ss_dssp             EEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCE-EESCTTTCTTEEEEEECCS--
T ss_pred             ccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceecc-ceeccccccceeeeeeecc--
Confidence            766533333  33345566778889999999999999999988665433322211111 11111100      00011  


Q ss_pred             eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      .....+.+++++++++..|+.|++||++   ..+.+..+..+...+.++.|+|.+.++++++.|+.|++|++++ +.++.
T Consensus       162 ~~v~~~~~~~~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~-~~~~~  237 (355)
T d1nexb2         162 ASVRTVSGHGNIVVSGSYDNTLIVWDVA---QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMY  237 (355)
T ss_dssp             SCEEEEEEETTEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-CCEEE
T ss_pred             ccccccccccceeeeecccceeeeeecc---cccceeeeeccccccccccccccceeeecccccceEEeeeccc-ccccc
Confidence            1223456678999999999999999999   7888888888999999999999999999999999999999999 99999


Q ss_pred             EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152         270 KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD  349 (444)
Q Consensus       270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i  349 (444)
                      .+.+|...|++++|++  ++|++++.||.|++||+.++..... .|...+.++++.+        +++.+++ ++.|+.|
T Consensus       238 ~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~l~-~g~d~~i  305 (355)
T d1nexb2         238 TLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFS-YHHTNLSAITTFY--------VSDNILV-SGSENQF  305 (355)
T ss_dssp             EECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEE-EECTTCCCCCEEE--------ECSSEEE-EEETTEE
T ss_pred             cccccccccccccccc--ceeeeeecccccccccccccceecc-cccCCceEEEEEc--------CCCCEEE-EEeCCEE
Confidence            9999999999999974  6999999999999999998766544 3445555443321        2234444 5568999


Q ss_pred             cccCCCcccccc
Q psy8152         350 EKYDPEHFEMNQ  361 (444)
Q Consensus       350 ~~W~~~~~~~~~  361 (444)
                      +||++.++++..
T Consensus       306 ~vwd~~tg~~~~  317 (355)
T d1nexb2         306 NIYNLRSGKLVH  317 (355)
T ss_dssp             EEEETTTCCBCC
T ss_pred             EEEECCCCCEEE
Confidence            999999877653

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-34  Score=260.00  Aligned_cols=277  Identities=10%  Similarity=0.076  Sum_probs=211.9

Q ss_pred             CcccEEEecCC-CcEEEEEcCCCccceeeeeeecccCc-ccceEEEeeec-cCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152           5 DDYNIYIGSST-GAFKGVNLSKDKCIIKNIQNVKYITN-KASVLALNWGN-VEESELLIAYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         5 ~~~~l~~g~~d-g~i~i~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~~l~~~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      .+..|++++.+ ..|+.|+......  .....+.  +| ...|++++|+| .++.+|++|+.||+|+||++..++....+
T Consensus        28 ~~~~la~~~~~~~~i~~~~~~~~~~--~~~~~~~--gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~  103 (325)
T d1pgua1          28 TTNAIAYPCGKSAFVRCLDDGDSKV--PPVVQFT--GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV  103 (325)
T ss_dssp             TTTEEEEEETTEEEEEECCSSCCSS--CSEEEEC--TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEE
T ss_pred             CCCEEEEEeCCCEEEEEEeCCCCCc--cceEEEe--CCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeee
Confidence            34566666544 3355565444331  1122222  56 57899999995 25679999999999999999776655443


Q ss_pred             e------eccccccEEEE--EeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCe
Q psy8152          82 D------VSFGEGDIVGV--SRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKEND  150 (444)
Q Consensus        82 ~------~~~~~~~v~~~--s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~  150 (444)
                      .      ...|..+|.++  ++++++|++++.  ++.+++|+..+++++..+.+|...|.+++|+|++. ++++++.|+.
T Consensus       104 ~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~  183 (325)
T d1pgua1         104 EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGS  183 (325)
T ss_dssp             EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTE
T ss_pred             ecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccc
Confidence            2      22456667665  678888887764  67899999999998888888999999999999765 4778999999


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      |++|++...+.......+..               +...|++++|+|+ +.+|++++.|+.|++||++   ....+..+.
T Consensus       184 v~~~d~~~~~~~~~~~~~~~---------------~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~---~~~~~~~l~  245 (325)
T d1pgua1         184 VVFYQGPPFKFSASDRTHHK---------------QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---SGEFLKYIE  245 (325)
T ss_dssp             EEEEETTTBEEEEEECSSSC---------------TTCCEEEEEECSTTCCEEEEEETTCCEEEEETT---TCCEEEECC
T ss_pred             cccccccccccceecccccC---------------CCCccEEeeeccccceeccccccccceeeeeec---ccccccccc
Confidence            99999988776655544322               2347999999997 5899999999999999999   788888888


Q ss_pred             CCCCCeeEEEEc---cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCc--eeEEEecCC-CCEEEEEECCCcEEEEE
Q psy8152         230 IPDVALSCITTT---NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGC--VKDIACPLN-ENLILSVSLDRHFRVHD  303 (444)
Q Consensus       230 ~~~~~i~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~--i~~~~~s~~-~~~l~s~~~dg~i~vw~  303 (444)
                      +|..++..+.|+   |++++|++++.|+.|+|||+++ ++++..+..|...  +..+++.+. +.+|++++.||.|+|||
T Consensus       246 ~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwd  324 (325)
T d1pgua1         246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE  324 (325)
T ss_dssp             BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred             ccccccccceeeeeccCCCEEEEEeCCCeEEEEECCC-CCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEE
Confidence            888887776666   6899999999999999999999 9999888765543  334444433 35899999999999999


Q ss_pred             c
Q psy8152         304 F  304 (444)
Q Consensus       304 ~  304 (444)
                      +
T Consensus       325 l  325 (325)
T d1pgua1         325 L  325 (325)
T ss_dssp             T
T ss_pred             C
Confidence            6

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=248.57  Aligned_cols=268  Identities=16%  Similarity=0.240  Sum_probs=220.0

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      .|...|+|+.|   ++++||+|+.||+|+|||+.+++++..+.  +|...|.++++++++|++|+.|+.|++|++..+..
T Consensus        13 ~~~~~V~c~~~---d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~--~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~~~   87 (293)
T d1p22a2          13 ETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILT--GHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM   87 (293)
T ss_dssp             SSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEEC--CCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCE
T ss_pred             CCCCCEEEEEE---cCCEEEEEeCCCeEEEEECCCCcEEEEEe--cCCCCEeeeecccceeecccccccccccccccccc
Confidence            78899999765   48999999999999999999999988875  78999999999999999999999999999998877


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee---eeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI---FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                      ......+..  ....+.+....++++..++.+++|++......   ..+..+..                  .|..+.+.
T Consensus        88 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~  147 (293)
T d1p22a2          88 LNTLIHHCE--AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------------------AVNVVDFD  147 (293)
T ss_dssp             EEEECCCCS--CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS------------------CEEEEEEE
T ss_pred             ccccccccc--ccccccccccceeecccccceeEeecccccccccccccccccc------------------ccccceec
Confidence            653333333  23344556778999999999999999875533   22233333                  57666665


Q ss_pred             cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152         197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG  276 (444)
Q Consensus       197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~  276 (444)
                      +  ..+++++.|+.|++||++   ..+++..+.++...+..+.++  +.+|++++.||.|++||+++ ...+..+.+|..
T Consensus       148 ~--~~~~~~s~d~~i~~~d~~---~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~  219 (293)
T d1p22a2         148 D--KYIVSASGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEE  219 (293)
T ss_dssp             T--TEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-CCEEEEECCCSS
T ss_pred             c--cccccccCCCceeeecCC---CCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEeccc-ceeeeeecccce
Confidence            4  678899999999999999   788888899998888887775  56899999999999999999 999999999988


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEcCC---------CceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDFHS---------KKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKG  346 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~---------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d  346 (444)
                      .+..  +++++.+|++++.||.|++|++..         ..++..+. |...|++++|.+           .+++|++.|
T Consensus       220 ~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~-----------~~l~s~s~D  286 (293)
T d1p22a2         220 LVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-----------FQIVSSSHD  286 (293)
T ss_dssp             CEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS-----------SCEEECCSS
T ss_pred             eeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcC-----------CEEEEEecC
Confidence            8875  456778999999999999999754         23445544 888999998742           479999999


Q ss_pred             CCccccC
Q psy8152         347 DSDEKYD  353 (444)
Q Consensus       347 ~~i~~W~  353 (444)
                      ++|+|||
T Consensus       287 g~i~iWD  293 (293)
T d1p22a2         287 DTILIWD  293 (293)
T ss_dssp             SEEEEEC
T ss_pred             CEEEEeC
Confidence            9999997

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.3e-34  Score=265.24  Aligned_cols=273  Identities=11%  Similarity=0.115  Sum_probs=197.2

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc----cceeeccccccEEE------EEe---CCCeEEEEecC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN----TNTDVSFGEGDIVG------VSR---YDECILTAVKS  106 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~----~~~~~~~~~~~v~~------~s~---~~~~l~~~~~d  106 (444)
                      +|.+.|++++++   +++|++|+.|++|+||+..+....    .......|...+..      +..   +..++++++.|
T Consensus        12 ~H~~~I~~v~~~---~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d   88 (393)
T d1sq9a_          12 AHDADIFSVSAC---NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS   88 (393)
T ss_dssp             CSSSCEEEEEEC---SSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred             cccCccEEEEEe---CCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCC
Confidence            899999999988   479999999999999997655421    22222233332221      121   23468899999


Q ss_pred             CcEEEEEcCCCCcccc----------ccccCCCeEEEEEecc-----CCEEEEeeCCCeEEEEEcCCcee-eeeeecccc
Q psy8152         107 GDVKLWRYKTEPDQWT----------NFNVGPQLECMKHNKH-----SNIIATGGKENDLKLWDLNTTKN-IFSAKNVSH  170 (444)
Q Consensus       107 g~i~iw~~~~~~~~~~----------~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~  170 (444)
                      |.|++|++........          ...+...+..++|.++     +.++++++.||.+++|++..... ......+..
T Consensus        89 g~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~  168 (393)
T d1sq9a_          89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS  168 (393)
T ss_dssp             SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred             CcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeec
Confidence            9999999765443321          1224556788888764     46889999999999999864211 000000000


Q ss_pred             eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE------EeCCCCCeeEEEEccCC
Q psy8152         171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK------VDIPDVALSCITTTNQS  244 (444)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~  244 (444)
                      ........ ..........+++++|+|++ +|++|+.|++|++||+.   ..+++..      +.+|..+|++++|+|+|
T Consensus       169 ~~~~~~~~-~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~---~~~~~~~~~~~~~l~~h~~~V~~l~~spdg  243 (393)
T d1sq9a_         169 PTLELQGT-VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS---TLRPLYNFESQHSMINNSNSIRSVKFSPQG  243 (393)
T ss_dssp             CEEEEEEE-ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT---TTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred             cceecccc-eecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeec---ccccccccccccccccccceEEEccccccc
Confidence            00000000 00111223358999999986 89999999999999998   5555544      34688999999999999


Q ss_pred             CEEEEEcCCCc---EEEEEcCCCCcceeEec-------------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         245 HYVIVGSTTGD---MMAVDLRGKGKPCYKYK-------------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       245 ~~l~~~~~dg~---i~iwd~~~~~~~~~~~~-------------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      ++|++|+.|++   |++||+.+ ++++..+.             +|...|++|+|+|++++|+|++.|++|+|||+.+++
T Consensus       244 ~~l~sgs~D~t~~~i~lwd~~~-g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~  322 (393)
T d1sq9a_         244 SLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE  322 (393)
T ss_dssp             TEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred             ceeeeecCCCCcceeeeccccc-ceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCC
Confidence            99999998874   89999998 88777764             799999999999999999999999999999999999


Q ss_pred             eEEEee-cCCceeE
Q psy8152         309 LLRKDY-MQSRLTS  321 (444)
Q Consensus       309 ~~~~~~-~~~~i~~  321 (444)
                      ++.++. |...|..
T Consensus       323 ~~~~l~gH~~~v~~  336 (393)
T d1sq9a_         323 RITTLNMHCDDIEI  336 (393)
T ss_dssp             EEEEEECCGGGCSS
T ss_pred             EEEEECCcCCcccC
Confidence            999886 7777653

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-32  Score=247.08  Aligned_cols=277  Identities=14%  Similarity=0.191  Sum_probs=226.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD  119 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~  119 (444)
                      +|.+.|.+ +++ +++++||||+.||+|+|||+.+++++..+.  +|...|.++++.+.+|++++.|+.+++|+......
T Consensus        14 GH~~~V~s-~~~-~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~--~h~~~V~~v~~~~~~l~s~s~D~~~~~~~~~~~~~   89 (342)
T d2ovrb2          14 GHDDHVIT-CLQ-FCGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC   89 (342)
T ss_dssp             CSTTSCEE-EEE-EETTEEEEEETTSCEEEEETTTCCEEEECC--CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEE
T ss_pred             CcCCceEE-EEE-ECCCEEEEEeCCCeEEEEECCCCCEEEEEe--CCCCCEEEEEeCCCccccceecccccccccccccc
Confidence            89999865 355 468999999999999999999999988775  78899999988888999999999999999988776


Q ss_pred             cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      ......+...+.....  ....++.+..++.+.+|+..+++....+.....                    ....+.+..
T Consensus        90 ~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~  147 (342)
T d2ovrb2          90 IHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA--------------------AVRCVQYDG  147 (342)
T ss_dssp             EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS--------------------CEEEEEECS
T ss_pred             eecccccceeEeeeec--ccccccccccceeEEEeecccccceeeeecccc--------------------cceeecccc
Confidence            6544445555555544  456788899999999999999887766654433                    223344566


Q ss_pred             CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCcee
Q psy8152         200 DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVK  279 (444)
Q Consensus       200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~  279 (444)
                      ..+++++.++.|++|+++   ....+..+.+|...+..+  ++++.+|++|+.||.|++||++. ++++..+.+|...+.
T Consensus       148 ~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~--~~~~~~l~s~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~  221 (342)
T d2ovrb2         148 RRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTS  221 (342)
T ss_dssp             SCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEE--EECSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCEE
T ss_pred             ceeeeecCCCeEEEeecc---cceeeEEEcCcccccccc--cCCCCEEEEEeCCCeEEEeeccc-ceeeeEeccccccee
Confidence            788999999999999999   788888888887665554  55788999999999999999999 999999999999999


Q ss_pred             EEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         280 DIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       280 ~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ++++++  ++|++++.|+.|++|++...+....+.    |...+.++.+.+           .++++++.||+|++|++.
T Consensus       222 ~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~s~s~Dg~i~iwd~~  288 (342)
T d2ovrb2         222 GMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-----------NFVITSSDDGTVKLWDLK  288 (342)
T ss_dssp             EEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-----------SEEEEEETTSEEEEEETT
T ss_pred             EEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCC-----------CeeEEEcCCCEEEEEECC
Confidence            888865  699999999999999999988777664    445566666542           478999999999999999


Q ss_pred             cccccc
Q psy8152         356 HFEMNQ  361 (444)
Q Consensus       356 ~~~~~~  361 (444)
                      .++..+
T Consensus       289 tg~~i~  294 (342)
T d2ovrb2         289 TGEFIR  294 (342)
T ss_dssp             TCCEEE
T ss_pred             CCCEEE
Confidence            877654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-32  Score=241.06  Aligned_cols=259  Identities=15%  Similarity=0.220  Sum_probs=214.9

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS   84 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~   84 (444)
                      ++++||+|+.||.|+||++.+++.    +..+.  +|.+.|++|+|+   +++|++|+.|+.|++|++..+.......  
T Consensus        24 d~~~l~sgs~Dg~i~vWd~~~~~~----~~~l~--~H~~~V~~v~~~---~~~l~s~s~D~~i~~~~~~~~~~~~~~~--   92 (293)
T d1p22a2          24 DDQKIVSGLRDNTIKIWDKNTLEC----KRILT--GHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLI--   92 (293)
T ss_dssp             CSSEEEEEESSSCEEEEESSSCCE----EEEEC--CCSSCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEEC--
T ss_pred             cCCEEEEEeCCCeEEEEECCCCcE----EEEEe--cCCCCEeeeecc---cceeeccccccccccccccccccccccc--
Confidence            578999999999999999988774    23333  899999999886   6799999999999999999887776654  


Q ss_pred             cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc---cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152          85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus        85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      .+........+....++++..++.+++|+........   ....|...|.++.+.  ...+++++.|+.|++|++++++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~  170 (293)
T d1p22a2          93 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEF  170 (293)
T ss_dssp             CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCE
T ss_pred             ccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcE
Confidence            3355566667778889999999999999988765433   345577788877775  56788999999999999999999


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      +..+.++..                  .+..+.++  +.+|++++.|+.|++||++   ....+..+..+...+..  ++
T Consensus       171 ~~~~~~~~~------------------~v~~~~~~--~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~v~~--~~  225 (293)
T d1p22a2         171 VRTLNGHKR------------------GIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRVLEGHEELVRC--IR  225 (293)
T ss_dssp             EEEEECCSS------------------CEEEEEEE--TTEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEE--EE
T ss_pred             EEEEccccc------------------ccccccCC--CCeEEEecCCCEEEEEecc---cceeeeeecccceeeee--cc
Confidence            888877766                  67777665  4789999999999999999   77888888888877765  55


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCC--------CCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         242 NQSHYVIVGSTTGDMMAVDLRG--------KGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       242 ~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                      +++.+|++|+.||.|++||+..        ...++..+.+|.+.|++++|+  +.+|++++.||+|+|||
T Consensus       226 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         226 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             CCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             ccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            6788999999999999999753        134677888999999999995  56899999999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.8e-33  Score=246.58  Aligned_cols=260  Identities=15%  Similarity=0.152  Sum_probs=208.6

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      +|..+|++|+|+ |    |++|+.||+|++|++.++.       ..|...|.++.. .+..+++++.|++|++|++...+
T Consensus        11 gH~~~I~~l~~s-~----l~sgs~Dg~v~~Wd~~~~~-------~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~~   78 (287)
T d1pgua2          11 GHNKGITALTVN-P----LISGSYDGRIMEWSSSSMH-------QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE   78 (287)
T ss_dssp             CCSSCEEEEETT-T----TEEEETTSCEEETTTTEEE-------CCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE
T ss_pred             CCCCceEEEEEC-c----EEEEeCCCeEEEEECCCCC-------CCCCCCEEEEEecCCCeEEEEeeccccccccccccc
Confidence            899999999999 4    9999999999999987543       367888888853 46678999999999999976432


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN  198 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  198 (444)
                             ....+.++++++++..+++++ ++.+.+|+..+++.+..+.....                     ..+++|+
T Consensus        79 -------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~  129 (287)
T d1pgua2          79 -------FGSQPKVASANNDGFTAVLTN-DDDLLILQSFTGDIIKSVRLNSP---------------------GSAVSLS  129 (287)
T ss_dssp             -------CSSCEEEEEECSSSEEEEEET-TSEEEEEETTTCCEEEEEECSSC---------------------EEEEEEC
T ss_pred             -------cccceeeeeeccCCceEEEee-cccceeeeccceeeeeeccccce---------------------eeeeecc
Confidence                   334577888888876666654 56788999998888777654332                     3456777


Q ss_pred             CCEEEEEeCCc-eEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee-Eecccc
Q psy8152         199 SDKVAVCSKQG-YVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY-KYKGFA  275 (444)
Q Consensus       199 ~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~h~  275 (444)
                      +..+++++.++ .+++|++.   .......+. .+...+++++|+|++.+|++|+.+|.|++||+.+ +..+. .+.+|.
T Consensus       130 ~~~~~v~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~~h~  205 (287)
T d1pgua2         130 QNYVAVGLEEGNTIQVFKLS---DLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRT  205 (287)
T ss_dssp             SSEEEEEETTTSCEEEEETT---EEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCS
T ss_pred             Ccceeeeccccceeeeeecc---ccceeeeeeeccCCceeEEEeccCccccccccccccccceeecc-cccccccccccc
Confidence            88888877765 79999998   444444443 4677899999999999999999999999999998 66554 467899


Q ss_pred             CceeEEEecCC----------CCEEEEEECCCcEEEEEcCC-CceEEEee-cCCceeEEEEcCCCcccccchhhhhcccc
Q psy8152         276 GCVKDIACPLN----------ENLILSVSLDRHFRVHDFHS-KKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSE  343 (444)
Q Consensus       276 ~~i~~~~~s~~----------~~~l~s~~~dg~i~vw~~~~-~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~  343 (444)
                      .+|++++|+|.          +.+|++|+.|++|+||++.. ++++..+. |...|++++|+++          ..++|+
T Consensus       206 ~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~----------~~l~s~  275 (287)
T d1pgua2         206 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP----------STLVSS  275 (287)
T ss_dssp             SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET----------TEEEEE
T ss_pred             cccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCC----------CEEEEE
Confidence            99999999875          46899999999999999977 44555543 8899999999854          358899


Q ss_pred             ccCCCccccCC
Q psy8152         344 EKGDSDEKYDP  354 (444)
Q Consensus       344 ~~d~~i~~W~~  354 (444)
                      +.|++|++|++
T Consensus       276 g~D~~v~iW~i  286 (287)
T d1pgua2         276 GADACIKRWNV  286 (287)
T ss_dssp             ETTSCEEEEEE
T ss_pred             ECCCeEEEEEE
Confidence            99999999985

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-32  Score=253.48  Aligned_cols=272  Identities=8%  Similarity=0.073  Sum_probs=194.2

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEE------EeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLA------LNWGNVEESELLIAYSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~   78 (444)
                      .+++|++++.|+.|+||+..................|...+..      +..++....++++++.||.|++|++......
T Consensus        23 ~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~  102 (393)
T d1sq9a_          23 CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET  102 (393)
T ss_dssp             CSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT
T ss_pred             eCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCce
Confidence            3578999999999999998665431111112222234443333      3333223457789999999999998655433


Q ss_pred             cceee----------ccccccEEEEEeC-----CCeEEEEecCCcEEEEEcCCCCcc------------------ccccc
Q psy8152          79 TNTDV----------SFGEGDIVGVSRY-----DECILTAVKSGDVKLWRYKTEPDQ------------------WTNFN  125 (444)
Q Consensus        79 ~~~~~----------~~~~~~v~~~s~~-----~~~l~~~~~dg~i~iw~~~~~~~~------------------~~~~~  125 (444)
                      ..+..          ..+.....++.++     +.++++++.||++++|++......                  .....
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (393)
T d1sq9a_         103 KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT  182 (393)
T ss_dssp             CCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS
T ss_pred             eeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccC
Confidence            32211          1122233344433     467999999999999998533211                  11223


Q ss_pred             cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE
Q psy8152         126 VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC  205 (444)
Q Consensus       126 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  205 (444)
                      +...+++++|+|++ +||+|+.|++|++||+.+++++..+.....            ...+..+|++++|+|++++|++|
T Consensus       183 ~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~------------l~~h~~~V~~l~~spdg~~l~sg  249 (393)
T d1sq9a_         183 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS------------MINNSNSIRSVKFSPQGSLLAIA  249 (393)
T ss_dssp             SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---------------CCCCCEEEEEECSSTTEEEEE
T ss_pred             CCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccc------------cccccceEEEcccccccceeeee
Confidence            45668999999987 899999999999999999888766543221            01123479999999999999999


Q ss_pred             eCCc---eEEEEEcCCCCCccceEEE-------------eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         206 SKQG---YVRVYDPKITTQRRPVLKV-------------DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       206 ~~d~---~i~i~d~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                      +.|+   .|++||+.   ....+..+             .+|...|++++|+|++++|++|+.|++|+|||+.+ +++++
T Consensus       250 s~D~t~~~i~lwd~~---~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~-g~~~~  325 (393)
T d1sq9a_         250 HDSNSFGCITLYETE---FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT-KERIT  325 (393)
T ss_dssp             EEETTEEEEEEEETT---TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEE
T ss_pred             cCCCCcceeeecccc---cceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCC-CCEEE
Confidence            9886   59999998   55555544             37899999999999999999999999999999999 99999


Q ss_pred             EeccccCcee----EEEecCCCCEEEEE
Q psy8152         270 KYKGFAGCVK----DIACPLNENLILSV  293 (444)
Q Consensus       270 ~~~~h~~~i~----~~~~s~~~~~l~s~  293 (444)
                      ++.+|...|.    .++|+|++..++++
T Consensus       326 ~l~gH~~~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         326 TLNMHCDDIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             EEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             EECCcCCcccCCccEEEECCCCCEEEEc
Confidence            9999987765    36777777766544

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6e-32  Score=243.70  Aligned_cols=294  Identities=10%  Similarity=0.028  Sum_probs=215.7

Q ss_pred             CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce-eeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcC
Q psy8152          40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT-DVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~-~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~  115 (444)
                      +|...|++|+|+ |++++||+|+.||+|+||++.++.....+ ...+|..+|.++  +++ +.+|++|+.|+.|++|++.
T Consensus         9 ~h~d~I~~l~fs-p~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~   87 (342)
T d1yfqa_           9 APKDYISDIKII-PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI   87 (342)
T ss_dssp             CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred             CCCCCEEEEEEe-CCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecc
Confidence            899999999999 79999999999999999999766543332 223678888776  555 4579999999999999998


Q ss_pred             CCCccccccccCC-CeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         116 TEPDQWTNFNVGP-QLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       116 ~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                      ..........+.. ......+.++...+++++.++.+++||++.+...........            ..........+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~------------~~~~~~~~~~~~  155 (342)
T d1yfqa_          88 GSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN------------SNNTKVKNKIFT  155 (342)
T ss_dssp             SSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC------------SSSSSSCCCEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccceeeccccccceeeecccc------------cccccceeeeee
Confidence            8777654444443 344555666889999999999999999976443322211111            000011355667


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcce-----
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPC-----  268 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~-----  268 (444)
                      +.+.+..+++++.|+.|++|+++.................+.+..+.+ ++..+++++.+|.+.+|++.. ....     
T Consensus       156 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~-~~~~~~~~~  234 (342)
T d1yfqa_         156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD-QGDDYNSSK  234 (342)
T ss_dssp             EEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT-TCCSTTCTT
T ss_pred             eeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecC-Ccceeeccc
Confidence            788889999999999999999982222223333344445566666554 578899999999999999865 2111     


Q ss_pred             ----------eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhh
Q psy8152         269 ----------YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEE  338 (444)
Q Consensus       269 ----------~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  338 (444)
                                ....+|...|++++|+|++++||+|+.||.|+|||+.+++.+..+........++|+++         +.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~---------~~  305 (342)
T d1yfqa_         235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACS---------DN  305 (342)
T ss_dssp             CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEEC---------SS
T ss_pred             cceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeC---------CC
Confidence                      11124667899999999999999999999999999999999888765555566666543         46


Q ss_pred             hccccccCCCccccCCCc
Q psy8152         339 QEHSEEKGDSDEKYDPEH  356 (444)
Q Consensus       339 ~~~s~~~d~~i~~W~~~~  356 (444)
                      ++++++.|+.+++|....
T Consensus       306 ~l~~a~sdd~~~~~~~~~  323 (342)
T d1yfqa_         306 ILCLATSDDTFKTNAAID  323 (342)
T ss_dssp             EEEEEEECTHHHHCSSSC
T ss_pred             EEEEEEcCCcEEEeeeeC
Confidence            788888899999997653

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.2e-32  Score=238.28  Aligned_cols=251  Identities=13%  Similarity=0.118  Sum_probs=196.5

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccc
Q psy8152           9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG   88 (444)
Q Consensus         9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~   88 (444)
                      |++|+.||.|++|++.++..           +|...|.+++|+ + +..+++++.|++|++|++...+.       .+..
T Consensus        24 l~sgs~Dg~v~~Wd~~~~~~-----------~h~~~V~~~~~~-~-~~~~~s~s~D~~v~~w~~~~~~~-------~~~~   83 (287)
T d1pgua2          24 LISGSYDGRIMEWSSSSMHQ-----------DHSNLIVSLDNS-K-AQEYSSISWDDTLKVNGITKHEF-------GSQP   83 (287)
T ss_dssp             TEEEETTSCEEETTTTEEEC-----------CCCSCEEEEECC-S-TTCCEEEETTTEEEETTEEEEEC-------SSCE
T ss_pred             EEEEeCCCeEEEEECCCCCC-----------CCCCCEEEEEec-C-CCeEEEEeecccccccccccccc-------ccce
Confidence            89999999999999765431           799999999998 4 56789999999999999764322       2233


Q ss_pred             cEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC-eEEEEEcCCceeeeeeec
Q psy8152          89 DIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN-DLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        89 ~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~  167 (444)
                      ...++.+++.++++ +.++.+.+|+..+++.+. ...+..++  .++++++..+++++.++ .+++|++...+....+..
T Consensus        84 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~  159 (287)
T d1pgua2          84 KVASANNDGFTAVL-TNDDDLLILQSFTGDIIK-SVRLNSPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKT  159 (287)
T ss_dssp             EEEEECSSSEEEEE-ETTSEEEEEETTTCCEEE-EEECSSCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSS
T ss_pred             eeeeeccCCceEEE-eecccceeeeccceeeee-ecccccee--eeeeccCcceeeeccccceeeeeeccccceeeeeee
Confidence            33445556555554 566688999998888775 33344444  45667778888887765 799999987665554432


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE-EEeCCCCCeeEEEEccC---
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL-KVDIPDVALSCITTTNQ---  243 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---  243 (444)
                      ..                 ...+++++|+|++.+|++|+.||.|++||+.   ...... .+..|...|.+++|+|.   
T Consensus       160 ~~-----------------~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~  219 (287)
T d1pgua2         160 PL-----------------RAKPSYISISPSETYIAAGDVMGKILLYDLQ---SREVKTSRWAFRTSKINAISWKPAEKG  219 (287)
T ss_dssp             CC-----------------SSCEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred             cc-----------------CCceeEEEeccCccccccccccccccceeec---ccccccccccccccccceeeecccccc
Confidence            21                 1269999999999999999999999999998   554433 35688999999999874   


Q ss_pred             -------CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         244 -------SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       244 -------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                             +.+|++|+.|++|+||+++++.+.+..+.+|...|++++|+|++ .|++++.|+.|++|++
T Consensus       220 ~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             ----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             cccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence                   46899999999999999987566778888999999999999976 6889999999999986

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.4e-30  Score=234.56  Aligned_cols=283  Identities=11%  Similarity=0.079  Sum_probs=206.0

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV   83 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~   83 (444)
                      +++.+|++|+.||+|+||++..+...   .......+|..+|++++|+|+.+.+|++|+.|+.|++|++...........
T Consensus        21 p~~~~L~s~s~Dg~v~iwd~~~~~~~---~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~   97 (342)
T d1yfqa_          21 PSKSLLLITSWDGSLTVYKFDIQAKN---VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN   97 (342)
T ss_dssp             GGGTEEEEEETTSEEEEEEEETTTTE---EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred             CCCCEEEEEECCCeEEEEEccCCCcc---eEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccc
Confidence            35789999999999999999876542   122222379999999999955567899999999999999988776665543


Q ss_pred             ccccccE-EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc----c--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          84 SFGEGDI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF----N--VGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        84 ~~~~~~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      ....... ....++...+++++.++.+++||++.+.......    .  .......+.+.+.+..+++++.|+.|++|++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~  177 (342)
T d1yfqa_          98 NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRL  177 (342)
T ss_dssp             CCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEES
T ss_pred             cccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEec
Confidence            3333333 3346788899999999999999987654433111    1  2334456677788899999999999999999


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCc---cceEE-----
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQR---RPVLK-----  227 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~-----  227 (444)
                      ..............               ....+.+..+.+ ++..+++++.+|.+.+|+.......   .....     
T Consensus       178 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T d1yfqa_         178 PLCEDDNGTIEESG---------------LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR  242 (342)
T ss_dssp             SCCTTCCCEEEECS---------------CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred             ccCcccceeeeecc---------------cccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeee
Confidence            87554332221111               011355555544 5589999999999999998721100   01111     


Q ss_pred             ----EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152         228 ----VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD  303 (444)
Q Consensus       228 ----~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~  303 (444)
                          ...|...+++++|+|++++|++|+.||.|+|||+.+ ++.+.++..+ ..+..++|+|++++|++++.|+.+++|.
T Consensus       243 ~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~-~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCS
T ss_pred             eccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCC-CcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEee
Confidence                124566789999999999999999999999999999 9999888743 3445677888999999999999988886


Q ss_pred             cCC
Q psy8152         304 FHS  306 (444)
Q Consensus       304 ~~~  306 (444)
                      ...
T Consensus       321 ~~~  323 (342)
T d1yfqa_         321 AID  323 (342)
T ss_dssp             SSC
T ss_pred             eeC
Confidence            543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=1.3e-30  Score=237.46  Aligned_cols=317  Identities=11%  Similarity=0.044  Sum_probs=235.9

Q ss_pred             CCCCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC--eEEEEeCCCCccc
Q psy8152           1 MTLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ--KIKIYDTDFKNFN   78 (444)
Q Consensus         1 ~s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~   78 (444)
                      +|+++++++++++ .|.|++|++..+..     ..   ++|...|++++|+ |++++|++++.+.  .|++|++.+++..
T Consensus        10 fSP~dG~~~a~~~-~g~v~v~d~~~~~~-----~~---~~~~~~v~~~~~s-pDg~~l~~~~~~~g~~v~v~d~~~~~~~   79 (360)
T d1k32a3          10 FSPLDGDLIAFVS-RGQAFIQDVSGTYV-----LK---VPEPLRIRYVRRG-GDTKVAFIHGTREGDFLGIYDYRTGKAE   79 (360)
T ss_dssp             EEECGGGCEEEEE-TTEEEEECTTSSBE-----EE---CSCCSCEEEEEEC-SSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             ccCCCCCEEEEEE-CCeEEEEECCCCcE-----EE---ccCCCCEEEEEEC-CCCCEEEEEEcCCCCEEEEEECCCCcEE
Confidence            3566888888876 57999999987762     11   2689999999999 7999999877653  7999999988766


Q ss_pred             cceeeccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee----------
Q psy8152          79 TNTDVSFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG----------  146 (444)
Q Consensus        79 ~~~~~~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------  146 (444)
                      ...   .|...+  .+++|++++|++++.++.+++|++.+++....+..|...+.+++|+|++++|+.+.          
T Consensus        80 ~~~---~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~  156 (360)
T d1k32a3          80 KFE---ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY  156 (360)
T ss_dssp             ECC---CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred             Eee---CCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeec
Confidence            543   555555  45689999999999999999999999998877777889999999999999998643          


Q ss_pred             CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC----CCc
Q psy8152         147 KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT----TQR  222 (444)
Q Consensus       147 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~  222 (444)
                      .++.+++|++.+++....... ..                  .+..++|+|+|++|++++.++.+++|+....    ...
T Consensus       157 ~~~~~~v~d~~~~~~~~~~~~-~~------------------~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~  217 (360)
T d1k32a3         157 VMQAIHVYDMEGRKIFAATTE-NS------------------HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV  217 (360)
T ss_dssp             CEEEEEEEETTTTEEEECSCS-SS------------------BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred             cccceeeeccccCceeeeccc-cc------------------ccccccccCCCCEEEEEeCCCceEcccccccceeeccc
Confidence            455799999998776554433 23                  4888999999999999999999999997610    011


Q ss_pred             cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCc---EEEEEcCCCCcceeEeccccCceeEEEecCCC---CEEEEEECC
Q psy8152         223 RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGD---MMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE---NLILSVSLD  296 (444)
Q Consensus       223 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~---~~l~s~~~d  296 (444)
                      .....+..+...+..+.|+|++..++++..+..   .++|.+.........+..+...+..+.+.+.+   .++++++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (360)
T d1k32a3         218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK  297 (360)
T ss_dssp             BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCC
T ss_pred             cceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCC
Confidence            223334455566666778888877766544322   23343332123334455555666666665554   478888999


Q ss_pred             CcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         297 RHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       297 g~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      +.|++|++.+++..   .+.+.|.+++|+         |++++|++++.||.|++|++..++...
T Consensus       298 ~~i~~~d~~~~~~~---~~~~~v~~~~~S---------pDG~~l~~~~~Dg~i~v~d~~~~~~~~  350 (360)
T d1k32a3         298 GVLLKYDVKTRKVT---EVKNNLTDLRLS---------ADRKTVMVRKDDGKIYTFPLEKPEDER  350 (360)
T ss_dssp             EEEEEEETTTCCEE---EEEEEEEEEEEC---------TTSCEEEEEETTSCEEEEESSCTTSCE
T ss_pred             CEEEEEECCCCeEE---EecCCcCEEEEC---------CCCCEEEEEECCCeEEEEECCCCCcce
Confidence            99999999987753   244568888877         557899999999999999998766544

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=9.8e-27  Score=216.94  Aligned_cols=330  Identities=11%  Similarity=0.037  Sum_probs=215.3

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec---
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS---   84 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~---   84 (444)
                      .+++.+.+|.|++||+.+++.    +..+.  .| ..+..++|+ |++++|++++.|++|++||+.+++........   
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~----~~~l~--~g-~~~~~vafS-PDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~  105 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKI----VKVID--TG-YAVHISRMS-ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI  105 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSE----EEEEE--CC-SSEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred             EEEEEcCCCEEEEEECCCCcE----EEEEe--CC-CCeeEEEEC-CCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCC
Confidence            457788899999999999875    23333  33 568999999 79999999999999999999998866544332   


Q ss_pred             cccccEEE--EEeCCCeEEE-EecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCCce
Q psy8152          85 FGEGDIVG--VSRYDECILT-AVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNTTK  160 (444)
Q Consensus        85 ~~~~~v~~--~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~  160 (444)
                      +|...+.+  ++|+|+++++ +..++.+++||..++.+......|...+..+.+.+++. ..+.++.++...++......
T Consensus       106 ~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~  185 (426)
T d1hzua2         106 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG  185 (426)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCC
Confidence            33333443  3689998655 45789999999999887765555554444444444333 22333344443333333221


Q ss_pred             eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEcCCCCCccceEEEeCC--CCCeeE
Q psy8152         161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVDIP--DVALSC  237 (444)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~  237 (444)
                      .+................+      ....+..+.|+|++++++++. .+..+.+++..   ....+..+...  ..+...
T Consensus       186 ~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  256 (426)
T d1hzua2         186 KVLLVNYKDIDNLTVTSIG------AAPFLADGGWDSSHRYFMTAANNSNKVAVIDSK---DRRLSALVDVGKTPHPGRG  256 (426)
T ss_dssp             EEEEEECSSSSSCEEEEEE------CCSSEEEEEECTTSCEEEEEETTCSEEEEEETT---TTEEEEEEECSSCCCCSCC
T ss_pred             eEEEEEeccccceeeEEec------cCCccEeeeECCCCcEEEeeeecccceeeeecc---cccEEEEeccCCcccccce
Confidence            1111111111000000000      112588999999998777665 56678999998   66655554432  222334


Q ss_pred             EEEccCCC-E--EEEEcCCCcEEEEEcCCC------CcceeEeccccCceeEEEecCCCCEEEE-------EECCCcEEE
Q psy8152         238 ITTTNQSH-Y--VIVGSTTGDMMAVDLRGK------GKPCYKYKGFAGCVKDIACPLNENLILS-------VSLDRHFRV  301 (444)
Q Consensus       238 ~~~~~~~~-~--l~~~~~dg~i~iwd~~~~------~~~~~~~~~h~~~i~~~~~s~~~~~l~s-------~~~dg~i~v  301 (444)
                      +.+.+.+. .  .++.+.++.+.+|+....      .+....+.+|...+..++|+|++++|++       ++.+++|+|
T Consensus       257 ~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~v  336 (426)
T d1hzua2         257 ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV  336 (426)
T ss_dssp             EEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEE
T ss_pred             eeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEE
Confidence            44443322 2  223456788888876541      3677888999999999999999999994       456789999


Q ss_pred             EEcCCCceEEEee----------cCCceeEEEEcCCCcccccchhhhhc-cc----cccCCCccccCCCcccccccc
Q psy8152         302 HDFHSKKLLRKDY----------MQSRLTSILVRSDFSLENETKKEEQE-HS----EEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       302 w~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~~~~-~s----~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      ||+.++++..++.          +..++.+++|+++         ++++ ++    .+.++.|+|||..+.+.....
T Consensus       337 wd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpD---------Gk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i  404 (426)
T d1hzua2         337 FDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR---------GDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV  404 (426)
T ss_dssp             EETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSS---------SSEEEEEECCCTTSCCEEEEEETTTTEEEEEE
T ss_pred             EECCCCCcCeEEeccchhcccCCCCccEEEEEECCC---------CCEEEEEEecCCCCCCeEEEEECCCCeEEEEE
Confidence            9999988765542          3456888888855         4544 33    457889999999988766544

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.95  E-value=2.3e-25  Score=197.20  Aligned_cols=274  Identities=13%  Similarity=0.091  Sum_probs=211.3

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccc
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      ..++++.++.|.+||+.+++.    +..+.   ....+..++|+ |++++|+ +++.++.|++||+.+++.+..+..+. 
T Consensus         4 ~yV~~~~~~~v~v~D~~t~~~----~~~i~---~g~~p~~va~s-pdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-   74 (301)
T d1l0qa2           4 AYIANSESDNISVIDVTSNKV----TATIP---VGSNPMGAVIS-PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-   74 (301)
T ss_dssp             EEEEETTTTEEEEEETTTTEE----EEEEE---CSSSEEEEEEC-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred             EEEEECCCCEEEEEECCCCeE----EEEEE---CCCCceEEEEe-CCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-
Confidence            345678899999999998874    12222   34567899999 7999875 56678999999999999888876322 


Q ss_pred             cccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCCceeeee
Q psy8152          87 EGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNTTKNIFS  164 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~  164 (444)
                      ...-..+++++.+++ ++..++.+.+|+..+++... ...+...+.+++|+|++..++ ++..++.+.+|+..+...+..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (301)
T d1l0qa2          75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT  153 (301)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cccccccccccccccccccccceeeecccccceeee-eccccccceEEEeecCCCeeeeeeccccceeeeeccccceeee
Confidence            333455678887654 55667889999999888775 555666789999999888765 555688899999999988887


Q ss_pred             eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152         165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ  243 (444)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (444)
                      +..+..                   +..++++|++..+++++.+ +.+.+|+..   .......+..+ ..+..++|+++
T Consensus       154 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~  210 (301)
T d1l0qa2         154 VSVGRS-------------------PKGIAVTPDGTKVYVANFDSMSISVIDTV---TNSVIDTVKVE-AAPSGIAVNPE  210 (301)
T ss_dssp             EECCSS-------------------EEEEEECTTSSEEEEEETTTTEEEEEETT---TTEEEEEEECS-SEEEEEEECTT
T ss_pred             cccCCC-------------------ceEEEeeccccceeeeccccccccccccc---ceeeeeccccc-CCcceeecccc
Confidence            766555                   8889999999887777654 667777777   55555555443 45778999999


Q ss_pred             CCEEEEEc---CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE-EEEECCCcEEEEEcCCCceEEEeecC
Q psy8152         244 SHYVIVGS---TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI-LSVSLDRHFRVHDFHSKKLLRKDYMQ  316 (444)
Q Consensus       244 ~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l-~s~~~dg~i~vw~~~~~~~~~~~~~~  316 (444)
                      ++.++++.   .++.|++||+.+ ++.+..+..+ ..+.+++|+|+|++| ++++.++.|++||+.+++++.++...
T Consensus       211 g~~~~v~~~~~~~~~v~v~D~~t-~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~vg  285 (301)
T d1l0qa2         211 GTKAYVTNVDKYFNTVSMIDTGT-NKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVG  285 (301)
T ss_dssp             SSEEEEEEECSSCCEEEEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred             ccccccccccceeeeeeeeecCC-CeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeCC
Confidence            99887653   346899999999 9988888754 567999999999976 56778999999999999998887643

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.94  E-value=2.5e-26  Score=208.81  Aligned_cols=281  Identities=10%  Similarity=-0.022  Sum_probs=213.1

Q ss_pred             EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCC--cEEEEEcCCCCccc
Q psy8152          46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSG--DVKLWRYKTEPDQW  121 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~~  121 (444)
                      ..-.|||.+++++|+++. |.|++|++.++...+.    .|...|.  +|+|+|++|++++.+.  .|++|++.+++.. 
T Consensus         6 ~~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~~~~----~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-   79 (360)
T d1k32a3           6 FAEDFSPLDGDLIAFVSR-GQAFIQDVSGTYVLKV----PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-   79 (360)
T ss_dssp             GEEEEEECGGGCEEEEET-TEEEEECTTSSBEEEC----SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-
T ss_pred             hcccccCCCCCEEEEEEC-CeEEEEECCCCcEEEc----cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-
Confidence            446799439999999875 8999999988877654    4555565  4578999988877653  7999999988877 


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                      .+..|...|.+++|+|++++|++++.++.+++|++.+++....+..+..                  .+.+++|+|+|++
T Consensus        80 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~spdg~~  141 (360)
T d1k32a3          80 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA------------------MITDFTISDNSRF  141 (360)
T ss_dssp             ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS------------------CCCCEEECTTSCE
T ss_pred             EeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccc------------------cccchhhccceee
Confidence            4788999999999999999999999999999999999988887777666                  6889999999999


Q ss_pred             EEEE----------eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc-----
Q psy8152         202 VAVC----------SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK-----  266 (444)
Q Consensus       202 l~~~----------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----  266 (444)
                      |+.+          ..++.+++|++.   .... ..+..+...+..++|+|+|++|++++.++.+++|+... ..     
T Consensus       142 la~~~~~~~~~~~~~~~~~~~v~d~~---~~~~-~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~-~~~~~~~  216 (360)
T d1k32a3         142 IAYGFPLKHGETDGYVMQAIHVYDME---GRKI-FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV-LNFSFEV  216 (360)
T ss_dssp             EEEEEEECSSTTCSCCEEEEEEEETT---TTEE-EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS-SCEECCS
T ss_pred             eeeeccccccceeeccccceeeeccc---cCce-eeecccccccccccccCCCCEEEEEeCCCceEcccccc-cceeecc
Confidence            9854          345679999998   4433 34455677788999999999999999999999999765 32     


Q ss_pred             --ceeEeccccCceeEEEecCCCCEEEEEECCC-----cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhh
Q psy8152         267 --PCYKYKGFAGCVKDIACPLNENLILSVSLDR-----HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQ  339 (444)
Q Consensus       267 --~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg-----~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  339 (444)
                        .+..+..|...+..+.|++++..++++..+.     .+..+++..+.......+...+..+.+... +     +...+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~  290 (360)
T d1k32a3         217 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVH-G-----EFAAY  290 (360)
T ss_dssp             CBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCC-C-----SHHHH
T ss_pred             ccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEec-C-----CCeeE
Confidence              2233444556666677888887776655432     244455555555444445555555444322 2     55678


Q ss_pred             ccccccCCCccccCCCcccccc
Q psy8152         340 EHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       340 ~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      +++++.++.+++|++...+...
T Consensus       291 ~~~~~~~~~i~~~d~~~~~~~~  312 (360)
T d1k32a3         291 YQGAPEKGVLLKYDVKTRKVTE  312 (360)
T ss_dssp             HHCCCCCEEEEEEETTTCCEEE
T ss_pred             EEecCCCCEEEEEECCCCeEEE
Confidence            8999999999999998766543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=1.4e-25  Score=201.86  Aligned_cols=293  Identities=9%  Similarity=-0.022  Sum_probs=213.8

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeecc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSF   85 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~   85 (444)
                      .+|++++.++.|++||+.+.+.    +..+....+...+.+++|+ |++++|+ +++.++.|++||+.+++.+..+..+.
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~----~~~i~~~~~~~~~~~i~~s-pDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~   76 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAV----DKVITIADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLST   76 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEE----EEEEECTTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred             eEEEEEcCCCEEEEEECCCCeE----EEEEECCCCCCCccEEEEC-CCCCEEEEEECCCCeEEEEECCCCcEEEEEecCC
Confidence            6799999999999999998875    2334433456678899999 7999875 56678999999999999888775432


Q ss_pred             c-----cccEEEEEeCCCeEEEEec------------CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC
Q psy8152          86 G-----EGDIVGVSRYDECILTAVK------------SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE  148 (444)
Q Consensus        86 ~-----~~~v~~~s~~~~~l~~~~~------------dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  148 (444)
                      .     ...-.+++|++++++++..            +..+.+|+..+++... ...+...+.+++|+|+++++++++. 
T Consensus        77 ~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~-  154 (337)
T d1pbyb_          77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFEAPRQITMLAWARDGSKLYGLGR-  154 (337)
T ss_dssp             TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEECCSSCCCEEECTTSSCEEEESS-
T ss_pred             CcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEE-eccccCCceEEEEcCCCCEEEEEcC-
Confidence            1     2223567899999887763            5678899999888775 4456667889999999999999874 


Q ss_pred             CeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc------CccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc
Q psy8152         149 NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR------RPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR  222 (444)
Q Consensus       149 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  222 (444)
                       .+.+||..+++....+..+.. .....+.|++....      ....+.......+...+..+..++.+.+|+..   ..
T Consensus       155 -~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  229 (337)
T d1pbyb_         155 -DLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE---TG  229 (337)
T ss_dssp             -SEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT---TC
T ss_pred             -CcceeeeecCcEEEEeecCCc-cccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcC---CC
Confidence             478899999888777654332 11111222211100      00111112222233333344556789999988   33


Q ss_pred             cc-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152         223 RP-VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV  301 (444)
Q Consensus       223 ~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v  301 (444)
                      .. ...+..+...+..+.++|++.+++.+  ++.|++||+.+ ++.+..+. +...+.+++|+|+|++|++++.+++|+|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v  305 (337)
T d1pbyb_         230 EMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-NASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAA  305 (337)
T ss_dssp             CEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-TEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEE
T ss_pred             cEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCC-CcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence            33 33355667778889999999988776  47899999999 99888886 5667899999999999999999999999


Q ss_pred             EEcCCCceEEEeec
Q psy8152         302 HDFHSKKLLRKDYM  315 (444)
Q Consensus       302 w~~~~~~~~~~~~~  315 (444)
                      ||+.+++.+.++..
T Consensus       306 ~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         306 YDAETLEKKGQVDL  319 (337)
T ss_dssp             EETTTCCEEEEEEC
T ss_pred             EECCCCcEEEEEEC
Confidence            99999999887753

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.94  E-value=5.5e-24  Score=188.19  Aligned_cols=269  Identities=12%  Similarity=0.046  Sum_probs=210.5

Q ss_pred             EEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEEEEec
Q psy8152          59 LIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK  137 (444)
Q Consensus        59 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  137 (444)
                      ++++.+++|.+||+.+++.+..+.... ...-.+++|+|++|+ +++.++.|++||+.+++.+..+..+ ..+..++|++
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g~-~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~-~~~~~~~~~~   83 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVAVSP   83 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEEECT
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECCC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc-cccccccccc
Confidence            456788999999999999998886532 334467899999874 6667899999999999888644444 4578999999


Q ss_pred             cCCEEE-EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEE
Q psy8152         138 HSNIIA-TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYD  215 (444)
Q Consensus       138 ~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d  215 (444)
                      ++..++ ++..++.+.+|+..+++....+..+..                   +.+++|+|++..++ ++..++.+.+|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~dg~~~~~~~~~~~~~~~~~  144 (301)
T d1l0qa2          84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS-------------------PLGLALSPDGKKLYVTNNGDKTVSVIN  144 (301)
T ss_dssp             TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS-------------------EEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ccccccccccccceeeecccccceeeeecccccc-------------------ceEEEeecCCCeeeeeeccccceeeee
Confidence            887655 556678999999999988888776555                   78899999997664 566788999999


Q ss_pred             cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      ..   ....+..+..+ ..+..++++|++.++++++.+ +.+.+|+... ......+.. ...+..++|++++..++.++
T Consensus       145 ~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~g~~~~v~~  218 (301)
T d1l0qa2         145 TV---TKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVKV-EAAPSGIAVNPEGTKAYVTN  218 (301)
T ss_dssp             TT---TTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEEC-SSEEEEEEECTTSSEEEEEE
T ss_pred             cc---ccceeeecccC-CCceEEEeeccccceeeecccccccccccccc-eeeeecccc-cCCcceeecccccccccccc
Confidence            98   77777766654 447889999999888876655 5677777776 666666654 45567899999998777654


Q ss_pred             C---CCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhc-cccccCCCccccCCCcccccccc
Q psy8152         295 L---DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQE-HSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       295 ~---dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      .   ++.|++||+.+++++..+.+...+.+++|+++         ++++ ++++.++.|++||+.+++.....
T Consensus       219 ~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spd---------g~~l~va~~~~~~i~v~D~~t~~~~~~~  282 (301)
T d1l0qa2         219 VDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPD---------GKKVYVALSFCNTVSVIDTATNTITATM  282 (301)
T ss_dssp             ECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTT---------SSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCC---------CCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence            3   46899999999999988888888899998855         5554 68888999999999987765443

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=1.7e-25  Score=208.22  Aligned_cols=314  Identities=10%  Similarity=0.012  Sum_probs=201.5

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec---
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS---   84 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~---   84 (444)
                      .+++.+.+|.|.|||..+++.    +..+.  .| ..+..++|+ |++++|++++.|+.|++||+.+++........   
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v----~~~~~--~g-~~~~~v~fS-pDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~  105 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEI----KTVLD--TG-YAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS  105 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCE----EEEEE--CS-SCEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS
T ss_pred             EEEEEcCCCEEEEEECCCCcE----EEEEe--CC-CCeeEEEEC-CCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCC
Confidence            358889999999999999885    23333  23 469999999 79999999999999999999887754433222   


Q ss_pred             cccccEEE--EEeCCCeE-EEEecCCcEEEEEcCCCCcccccc-----------ccCCCeEEEEEeccCCEE-EEeeCCC
Q psy8152          85 FGEGDIVG--VSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNF-----------NVGPQLECMKHNKHSNII-ATGGKEN  149 (444)
Q Consensus        85 ~~~~~v~~--~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l-~~~~~d~  149 (444)
                      .|...+.+  ++|+|++| +++..++.|++||..+++++..+.           .+......+.++|++..+ ++...++
T Consensus       106 ~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~  185 (432)
T d1qksa2         106 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  185 (432)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCC
Confidence            33333433  36799975 678889999999999988765332           245567788999988765 4566689


Q ss_pred             eEEEEEcCCceeeeeeec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCCCCccceEE
Q psy8152         150 DLKLWDLNTTKNIFSAKN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRPVLK  227 (444)
Q Consensus       150 ~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~  227 (444)
                      .|.+|+..+.+....... ...                  .+..++|+|+++++++++. .+.+.+++..   ..+.+..
T Consensus       186 ~i~~~d~~~~~~~~~~~i~~g~------------------~~~~~~~spdg~~~~va~~~~~~v~v~d~~---~~~~~~~  244 (432)
T d1qksa2         186 KILLVDYTDLNNLKTTEISAER------------------FLHDGGLDGSHRYFITAANARNKLVVIDTK---EGKLVAI  244 (432)
T ss_dssp             EEEEEETTCSSEEEEEEEECCS------------------SEEEEEECTTSCEEEEEEGGGTEEEEEETT---TTEEEEE
T ss_pred             eEEEEEccCCCcceEEEEcccC------------------ccccceECCCCCEEEEeccccceEEEeecc---cceEEEE
Confidence            999999988664433221 122                  4789999999987776655 5578888887   4444433


Q ss_pred             EeC-----CCCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCc-------ceeEec----------------------
Q psy8152         228 VDI-----PDVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGK-------PCYKYK----------------------  272 (444)
Q Consensus       228 ~~~-----~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~-------~~~~~~----------------------  272 (444)
                      +..     |........+...+...++.. .++.|.+|.... ..       ....+.                      
T Consensus       245 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~  323 (432)
T d1qksa2         245 EDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP-EGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA  323 (432)
T ss_dssp             EECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT-TTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred             eccCccccccCcccceecCCCCceecccccCCceEEeccccc-ccccccccEEEEEEEcCCCCeEEEEecCCccceeecc
Confidence            321     122222233333333333322 245555555433 11       111111                      


Q ss_pred             ---cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcc-c----cc
Q psy8152         273 ---GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEH-S----EE  344 (444)
Q Consensus       273 ---~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-s----~~  344 (444)
                         .|......+++ |+++.|++++.|+.+++|++.++..+.  .+..++.+++|+++         +++++ |    +.
T Consensus       324 ~~~~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l~--~~~~~v~~~~fS~D---------G~~v~~S~~~~~~  391 (432)
T d1qksa2         324 TLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGIT--EGQPRVVQGEFNKD---------GTEVWFSVWNGKD  391 (432)
T ss_dssp             TTCSSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTCC--SSCCEEEEEEECTT---------SSEEEEEEECCTT
T ss_pred             cCCCCCCeeeEEEE-EechhhcccccCCceEecccccccccC--CCCCcEEEeEECCC---------CCEEEEEEecCCC
Confidence               11111223444 677777788888888888775543322  35667778887754         55552 2    23


Q ss_pred             cCCCccccCCCcccccccc
Q psy8152         345 KGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       345 ~d~~i~~W~~~~~~~~~~~  363 (444)
                      .++.|+|||..+.++....
T Consensus       392 ~~g~i~i~D~~T~k~~~~i  410 (432)
T d1qksa2         392 QESALVVVDDKTLELKHVI  410 (432)
T ss_dssp             SCCEEEEEETTTTEEEEEE
T ss_pred             CCCcEEEEECCCceEEeEe
Confidence            5788999999988775544

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=3.7e-23  Score=192.46  Aligned_cols=292  Identities=14%  Similarity=0.054  Sum_probs=204.7

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEE-EEcCCeEEEEeCCCCccccc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~   80 (444)
                      ++++++|++++.||.|++|++.+++..  ....+... +|...+.+++|+ |++++|++ +..++.+++||..++.+...
T Consensus        70 SPDGk~l~~~~~d~~v~vwd~~t~~~~--~~~~i~~~~~~~~~~~s~~~s-pDG~~l~v~~~~~~~v~i~d~~~~~~~~~  146 (426)
T d1hzua2          70 SASGRYLLVIGRDARIDMIDLWAKEPT--KVAEIKIGIEARSVESSKFKG-YEDRYTIAGAYWPPQFAIMDGETLEPKQI  146 (426)
T ss_dssp             CTTSCEEEEEETTSEEEEEETTSSSCE--EEEEEECCSEEEEEEECCSTT-CTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred             CCCCCEEEEEeCCCCEEEEEccCCcee--EEEEEeCCCCCcceEEeeeec-CCCCEEEEeecCCCeEEEEcCCccceeEE
Confidence            357789999999999999999988741  12222222 678888899999 79998765 45789999999999887766


Q ss_pred             eeecccccc-----------EEEEEeCCCeEEEEec-CCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEee-
Q psy8152          81 TDVSFGEGD-----------IVGVSRYDECILTAVK-SGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGG-  146 (444)
Q Consensus        81 ~~~~~~~~~-----------v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~-  146 (444)
                      +..+.....           ....++++..++.... .+.+.+++........ ....+...+..+.|+|++++++++. 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~  226 (426)
T d1hzua2         147 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAAN  226 (426)
T ss_dssp             EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEET
T ss_pred             eeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeee
Confidence            543221111           1223455555444333 3455566655544332 3456788899999999988877765 


Q ss_pred             CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC---EEEEEeCCceEEEEEcCC----C
Q psy8152         147 KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKI----T  219 (444)
Q Consensus       147 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~----~  219 (444)
                      .+..+.+++..+++.+........                ..+...+.+.+.+.   ..+..+.++.+.+|+...    .
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~  290 (426)
T d1hzua2         227 NSNKVAVIDSKDRRLSALVDVGKT----------------PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ  290 (426)
T ss_dssp             TCSEEEEEETTTTEEEEEEECSSC----------------CCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTT
T ss_pred             cccceeeeecccccEEEEeccCCc----------------ccccceeeeecCCCCceEEeccCCCceEEEeecccccccc
Confidence            566799999999888766654332                11233344444332   223345678888888761    1


Q ss_pred             CCccceEEEeCCCCCeeEEEEccCCCEEEE-------EcCCCcEEEEEcCCCCcceeEec---------cccCceeEEEe
Q psy8152         220 TQRRPVLKVDIPDVALSCITTTNQSHYVIV-------GSTTGDMMAVDLRGKGKPCYKYK---------GFAGCVKDIAC  283 (444)
Q Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~---------~h~~~i~~~~~  283 (444)
                      ...+....+.+|...+..++|+|++++|++       ++.+++|+|||+.+ +++..++.         .|...|.+++|
T Consensus       291 ~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t-~~~~~~~~~~~~~~~~~~~~~rv~~~~f  369 (426)
T d1hzua2         291 YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN-LDAKYQVLPIAEWADLGEGAKRVVQPEY  369 (426)
T ss_dssp             TBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTC-TTSCCEEECHHHHHCCCSSCCCEEEEEE
T ss_pred             ccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCC-CCcCeEEeccchhcccCCCCccEEEEEE
Confidence            123667788999999999999999999995       45678999999999 77766553         34567999999


Q ss_pred             cCCCCEEEEE-----ECCCcEEEEEcCCCceEEEee
Q psy8152         284 PLNENLILSV-----SLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       284 s~~~~~l~s~-----~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      ||+|++|+.+     +.++.|+|||..++++...+.
T Consensus       370 SpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~  405 (426)
T d1hzua2         370 NKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK  405 (426)
T ss_dssp             CSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEEC
T ss_pred             CCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEEC
Confidence            9999977543     357889999999999887765

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=8.7e-24  Score=190.62  Aligned_cols=299  Identities=10%  Similarity=-0.006  Sum_probs=210.1

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEE-EEcCCeEEEEeCCCCccccce
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTNT   81 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~   81 (444)
                      .+++.+|++++.++.|.+||+.+++.    +..+. +.|...+.+++|+ |++++|++ ++.++.|++||+.+++.+..+
T Consensus         5 ~~~~~~l~~~~~~~~v~v~D~~t~~~----~~t~~-~~~~~~p~~l~~s-pDG~~l~v~~~~~~~v~~~d~~t~~~~~~~   78 (346)
T d1jmxb_           5 KAGHEYMIVTNYPNNLHVVDVASDTV----YKSCV-MPDKFGPGTAMMA-PDNRTAYVLNNHYGDIYGIDLDTCKNTFHA   78 (346)
T ss_dssp             CTTCEEEEEEETTTEEEEEETTTTEE----EEEEE-CSSCCSSCEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCCCcEEEEEcCCCEEEEEECCCCCE----EEEEE-cCCCCCcceEEEC-CCCCEEEEEECCCCcEEEEeCccCeeeeee
Confidence            35678999999999999999998874    22222 2466778999999 79988754 557899999999999888766


Q ss_pred             eeccc------cccEEEEEeCCCeEEEEe------------cCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccCCE
Q psy8152          82 DVSFG------EGDIVGVSRYDECILTAV------------KSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNI  141 (444)
Q Consensus        82 ~~~~~------~~~v~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~  141 (444)
                      .....      ...-..++|+|+++++++            .++.+.+|+..+++....+..  ....+..+.+++++.+
T Consensus        79 ~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (346)
T d1jmxb_          79 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL  158 (346)
T ss_dssp             ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCE
T ss_pred             cccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEE
Confidence            53222      122356789999887765            367789999888776543332  3445667777777766


Q ss_pred             EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc----cc----eeEEEEecCCCEEEEEeCCceEEE
Q psy8152         142 IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP----VW----VNGISFLPNSDKVAVCSKQGYVRV  213 (444)
Q Consensus       142 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----i~~~~~~~~~~~l~~~~~d~~i~i  213 (444)
                      ++++   +.+.+|++.+++.+..+..+.. .....++|++......    ..    .....+.+....++++...+.+.+
T Consensus       159 ~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
T d1jmxb_         159 YVAG---PDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS  234 (346)
T ss_dssp             EEES---SSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred             EEeC---CcceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEE
Confidence            6653   4589999999888877654432 2333344443211100    00    111222233355666677788999


Q ss_pred             EEcCCCCCccc-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         214 YDPKITTQRRP-VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       214 ~d~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      |++.   .... ...+..+...+..+.+++++.+++... .+.|++||+.+ ++.+..+. +...+.+++|+|+|++|++
T Consensus       235 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~-~~~~~~~~-~~~~~~~va~s~DG~~l~v  308 (346)
T d1jmxb_         235 VDLK---TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQ-RKLIKAAN-LDHTYYCVAFDKKGDKLYL  308 (346)
T ss_dssp             EETT---TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTT-TEEEEEEE-CSSCCCEEEECSSSSCEEE
T ss_pred             EECC---CCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCC-CcEEEEEc-CCCCEEEEEEcCCCCEEEE
Confidence            9998   3333 333556777888999999888877765 45799999999 88888876 4557899999999999999


Q ss_pred             EECCCcEEEEEcCCCceEEEeecCC
Q psy8152         293 VSLDRHFRVHDFHSKKLLRKDYMQS  317 (444)
Q Consensus       293 ~~~dg~i~vw~~~~~~~~~~~~~~~  317 (444)
                      ++.++.|+|||+.+++.+.++....
T Consensus       309 ~~~d~~v~v~D~~t~~~i~~i~~p~  333 (346)
T d1jmxb_         309 GGTFNDLAVFNPDTLEKVKNIKLPG  333 (346)
T ss_dssp             ESBSSEEEEEETTTTEEEEEEECSS
T ss_pred             EeCCCcEEEEECccCCEEEEEECCC
Confidence            9999999999999999999887543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.92  E-value=1.2e-23  Score=188.96  Aligned_cols=268  Identities=12%  Similarity=0.039  Sum_probs=203.1

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeecccc--ccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCcccccccc-----C
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE--GDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNV-----G  127 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~--~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~-----~  127 (444)
                      .+|++++.|++|+|||+.+++++..+..+.+.  ....+++|+|+++ ++++.++.|.+||+.+++.+.....+     .
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            58999999999999999999999888765443  3456789999987 45677999999999999887644433     2


Q ss_pred             CCeEEEEEeccCCEEEEeeC------------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         128 PQLECMKHNKHSNIIATGGK------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l~~~~~------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      ..+..++|+|++++++++..            ++.+.+||..+++.+..+.....                   +..++|
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------------~~~~~~  142 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-------------------ITMLAW  142 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-------------------CCCEEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCC-------------------ceEEEE
Confidence            34567899999999987763            57788999999888877765544                   888999


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC------------------------EEEEEc
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH------------------------YVIVGS  251 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~l~~~~  251 (444)
                      +|+++++++++.+  +.+||..   .......+..+... ....++|++.                        .+..+.
T Consensus       143 s~dg~~l~~~~~~--~~~~d~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (337)
T d1pbyb_         143 ARDGSKLYGLGRD--LHVMDPE---AGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA  216 (337)
T ss_dssp             CTTSSCEEEESSS--EEEEETT---TTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred             cCCCCEEEEEcCC--cceeeee---cCcEEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecc
Confidence            9999999988754  6789988   56666555433221 1111222211                        111223


Q ss_pred             CCCcEEEEEcCCCCccee-EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcc
Q psy8152         252 TTGDMMAVDLRGKGKPCY-KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL  330 (444)
Q Consensus       252 ~dg~i~iwd~~~~~~~~~-~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~  330 (444)
                      .++.+.+|++.+ +.... .+..+...+..++++|++.+++++  ++.|++||+.+++++.++.+...+.+++|+++   
T Consensus       217 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~d---  290 (337)
T d1pbyb_         217 YRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTD---  290 (337)
T ss_dssp             EEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTT---
T ss_pred             cCccEEEEEcCC-CcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEECCC---
Confidence            345688999988 66544 344567788889999999988766  58899999999999999999889999998854   


Q ss_pred             cccchhhhhccccccCCCccccCCCccccc
Q psy8152         331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       331 ~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                            ++++++++.++.|++||....+..
T Consensus       291 ------G~~l~v~~~~~~i~v~D~~t~~~v  314 (337)
T d1pbyb_         291 ------GSTVWLGGALGDLAAYDAETLEKK  314 (337)
T ss_dssp             ------SCEEEEESBSSEEEEEETTTCCEE
T ss_pred             ------CCEEEEEeCCCcEEEEECCCCcEE
Confidence                  678888999999999999876654

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.91  E-value=4.7e-23  Score=191.56  Aligned_cols=296  Identities=10%  Similarity=-0.015  Sum_probs=207.6

Q ss_pred             CCCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCccccc
Q psy8152           3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      ++++++|++++.+|.|++|++.+++.  .....+... +|.+.+.+..|+ |++++| ++++.++.|+|||..+++.+..
T Consensus        70 SpDG~~l~~~s~dg~v~~~d~~t~~~--~~~~~i~~~~~~~~~~~s~~~S-pDG~~l~vs~~~~~~v~i~d~~t~~~~~~  146 (432)
T d1qksa2          70 SASGRYLFVIGRDGKVNMIDLWMKEP--TTVAEIKIGSEARSIETSKMEG-WEDKYAIAGAYWPPQYVIMDGETLEPKKI  146 (432)
T ss_dssp             CTTSCEEEEEETTSEEEEEETTSSSC--CEEEEEECCSEEEEEEECCSTT-CTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred             CCCCCEEEEEcCCCCEEEEEeeCCCc--eEEEEEecCCCCCCeEEecccC-CCCCEEEEEcCCCCeEEEEeCccccceee
Confidence            45788999999999999999988763  112223322 677888888999 799986 6788899999999999988876


Q ss_pred             eeecc---------ccccE--EEEEeCCCeE-EEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEeeC
Q psy8152          81 TDVSF---------GEGDI--VGVSRYDECI-LTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGGK  147 (444)
Q Consensus        81 ~~~~~---------~~~~v--~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~  147 (444)
                      +..+.         +....  ..+++++..+ ++...++.|.+|+..+.+... ....+...+..++|+|+++++++++.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~  226 (432)
T d1qksa2         147 QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN  226 (432)
T ss_dssp             EECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG
T ss_pred             eccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEecc
Confidence            64322         12222  3447788765 556667999999998876543 23456778899999999998777664


Q ss_pred             -CCeEEEEEcCCceeeeeeeccc-----ceeeEeeeC-----------CCc----------ccccCccceeEEEEecCCC
Q psy8152         148 -ENDLKLWDLNTTKNIFSAKNVS-----HRVLVYSVK-----------PDE----------FDLRRPVWVNGISFLPNSD  200 (444)
Q Consensus       148 -d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~~~~-----------~~~----------~~~~~~~~i~~~~~~~~~~  200 (444)
                       .+.+.+++..+++.+..+....     .........           .+.          ....+...+....++|++.
T Consensus       227 ~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~  306 (432)
T d1qksa2         227 ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG  306 (432)
T ss_dssp             GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC
T ss_pred             ccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCC
Confidence             5689999998877665443211     000000000           000          0111223477778888888


Q ss_pred             EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE
Q psy8152         201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD  280 (444)
Q Consensus       201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~  280 (444)
                      .+++++.+...++|...   ...      .|.....++++ |+++.|++++.|+.+++|++.+ +..+   ..|...|.+
T Consensus       307 ~~~~~s~p~~~~lw~~~---~~~------~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~-~~~l---~~~~~~v~~  372 (432)
T d1qksa2         307 SLFIKTHPNSQYLYVDA---TLN------PEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAE-WAGI---TEGQPRVVQ  372 (432)
T ss_dssp             CCCEECCTTCSEEEEEC---TTC------SSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHH-HHTC---CSSCCEEEE
T ss_pred             eEEEEecCCccceeecc---cCC------CCCCeeeEEEE-EechhhcccccCCceEeccccc-cccc---CCCCCcEEE
Confidence            88888888888888766   221      22222345555 8999999999999999999866 4333   357778999


Q ss_pred             EEecCCCCEEEEEE-----CCCcEEEEEcCCCceEEEeec
Q psy8152         281 IACPLNENLILSVS-----LDRHFRVHDFHSKKLLRKDYM  315 (444)
Q Consensus       281 ~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~~~~~~~~  315 (444)
                      ++|+|+|++|+.+.     .++.|.|||..++++...+..
T Consensus       373 ~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~  412 (432)
T d1qksa2         373 GEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  412 (432)
T ss_dssp             EEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             eEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecC
Confidence            99999999886554     468899999999999777654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=2.6e-23  Score=187.46  Aligned_cols=279  Identities=8%  Similarity=0.041  Sum_probs=203.5

Q ss_pred             EeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccc
Q psy8152          48 LNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        48 ~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      ++|+ +++++|++++.+++|.+||+.+++++..+..+.. ...-.+++|+|++++ ++..++.|++||+.+++.+..+..
T Consensus         2 ~a~~-~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~   80 (346)
T d1jmxb_           2 PALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   80 (346)
T ss_dssp             CCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             ccCC-CCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecc
Confidence            5688 7999999999999999999999999988775433 234577899999864 556789999999999877653322


Q ss_pred             c------CCCeEEEEEeccCCEEEEee------------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152         126 V------GPQLECMKHNKHSNIIATGG------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP  187 (444)
Q Consensus       126 ~------~~~v~~~~~~~~~~~l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (444)
                      .      ...+..++|+|+|+++++++            .++.+.+|+..+++....+..+..                +
T Consensus        81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~  144 (346)
T d1jmxb_          81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM----------------P  144 (346)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC----------------C
T ss_pred             cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeec----------------c
Confidence            1      23456899999999998775            367788888887665544332221                1


Q ss_pred             cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCE---------------------
Q psy8152         188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHY---------------------  246 (444)
Q Consensus       188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------  246 (444)
                      ..+..+.+++++.+++++   +.+.+|++.   ....+..+..+.. ...+.++|++..                     
T Consensus       145 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (346)
T d1jmxb_         145 RQVYLMRAADDGSLYVAG---PDIYKMDVK---TGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK  217 (346)
T ss_dssp             SSCCCEEECTTSCEEEES---SSEEEECTT---TCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred             CceEEEEecCCCEEEEeC---CcceEEEcc---CCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeec
Confidence            136667777777766553   468899988   6666666554322 233344444332                     


Q ss_pred             -----EEEEcCCCcEEEEEcCCCCccee-EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCcee
Q psy8152         247 -----VIVGSTTGDMMAVDLRGKGKPCY-KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLT  320 (444)
Q Consensus       247 -----l~~~~~dg~i~iwd~~~~~~~~~-~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~  320 (444)
                           ++++.....+.+|++.+ +.... .+..|...+..+.+++++.+++.... +.|++||+.+++++..+.+...+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~~~~  295 (346)
T d1jmxb_         218 DDKQDPATADLLYGYLSVDLKT-GKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDHTYY  295 (346)
T ss_dssp             ------CCCEEEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECSSCCC
T ss_pred             cCceeEeeccCCceEEEEECCC-CceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCCCCEE
Confidence                 23334455688888887 55443 44567888899999999888877654 579999999999999988888899


Q ss_pred             EEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152         321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ  361 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~  361 (444)
                      +++|+++         ++++++++.++.|++||..+.+...
T Consensus       296 ~va~s~D---------G~~l~v~~~d~~v~v~D~~t~~~i~  327 (346)
T d1jmxb_         296 CVAFDKK---------GDKLYLGGTFNDLAVFNPDTLEKVK  327 (346)
T ss_dssp             EEEECSS---------SSCEEEESBSSEEEEEETTTTEEEE
T ss_pred             EEEEcCC---------CCEEEEEeCCCcEEEEECccCCEEE
Confidence            9999854         6788999999999999999776554

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.1e-20  Score=166.24  Aligned_cols=300  Identities=8%  Similarity=0.045  Sum_probs=197.9

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceeec--
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDVS--   84 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~--   84 (444)
                      .+++++.++.|++|++.....    +..++.+.|.+.|.+|+|+ |++++|++++. ++.|++|++........+..+  
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~----l~~~~~~~~~~~v~~la~s-pDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~   80 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGA----LTLTQVVDVPGQVQPMVVS-PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA   80 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSC----EEEEEEEECSSCCCCEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred             EEEECCCCCcEEEEEEcCCCC----eEEEEEEcCCCCEeEEEEe-CCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc
Confidence            446777999999999976543    2344444688999999999 79999976654 899999999766544333211  


Q ss_pred             -cccccEEEEEeCCCeEEEEec-CCcEEEEEcCCCCccc--cccccCCCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCc
Q psy8152          85 -FGEGDIVGVSRYDECILTAVK-SGDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNIIATGGK-ENDLKLWDLNTT  159 (444)
Q Consensus        85 -~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~  159 (444)
                       .....-.+++|+|++|++++. ++.|.+|+........  ....+...+.++.++|+++++++++. +..|.+|+....
T Consensus        81 ~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~  160 (333)
T d1ri6a_          81 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD  160 (333)
T ss_dssp             CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccC
Confidence             123334678999999988875 6789999887665433  23446777889999999998887764 567999998774


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCC-CCccceEEEe------CC
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKIT-TQRRPVLKVD------IP  231 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~-~~~~~~~~~~------~~  231 (444)
                      ...........     .       .........++|++++.+++.. ...+...+|+.... ........+.      ..
T Consensus       161 ~~~~~~~~~~~-----~-------~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  228 (333)
T d1ri6a_         161 GHLVAQDPAEV-----T-------TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD  228 (333)
T ss_dssp             SCEEEEEEEEE-----E-------CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred             Ccceeeeceee-----e-------eecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCc
Confidence            43222111100     0       0001246889999999776654 45667888887611 1111112221      12


Q ss_pred             CCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEec---cccCceeEEEecCCCCEEEEEE-CCCcEEEEEc--
Q psy8152         232 DVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDIACPLNENLILSVS-LDRHFRVHDF--  304 (444)
Q Consensus       232 ~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~--  304 (444)
                      ......++++++++++++ +...+.+.+|++.. ......+.   .+...+.+++|+|+|++|++++ .++.|++|++  
T Consensus       229 ~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         229 TRWAADIHITPDGRHLYACDRTASLITVFSVSE-DGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             CCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             cccceeEEEecccCceeeecccCCeEEEEEEcC-CCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence            344567889999987665 56678899999887 44443333   2345678899999999887765 4688999954  


Q ss_pred             CCCceE--EEeecCCceeEEEEc
Q psy8152         305 HSKKLL--RKDYMQSRLTSILVR  325 (444)
Q Consensus       305 ~~~~~~--~~~~~~~~i~~~~~~  325 (444)
                      .+|++.  .++.......+++++
T Consensus       308 ~tG~l~~~~~~~~g~~p~~v~~~  330 (333)
T d1ri6a_         308 EQGLLHEKGRYAVGQGPMWVVVN  330 (333)
T ss_dssp             TTTEEEEEEEEECSSSCCEEEEE
T ss_pred             CCCcEEEEEeccCCCCCcEEEEE
Confidence            566553  334444444555543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.84  E-value=2e-18  Score=155.86  Aligned_cols=293  Identities=9%  Similarity=0.031  Sum_probs=187.7

Q ss_pred             CCCcccEEEe-----cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeE
Q psy8152           3 LADDYNIYIG-----SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKI   67 (444)
Q Consensus         3 ~~~~~~l~~g-----~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i   67 (444)
                      ++++..+++.     ...+.|.+||..+++.    +..+.    .+.+..++|+ |++++|++++          .++.|
T Consensus        10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~----~~~~~----~g~~~~~a~S-pDg~~l~v~~~~~~~~~~g~~d~~v   80 (355)
T d2bbkh_          10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRV----IGMID----GGFLPNPVVA-DDGSFIAHASTVFSRIARGERTDYV   80 (355)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEE----EEEEE----ECSSCEEEEC-TTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred             CCCCCEEEEEecccCCCcCeEEEEECCCCcE----EEEEE----CCCCCceEEc-CCCCEEEEEeCCCccccccCCCCEE
Confidence            3566667664     3456799999998874    12222    2344479999 7999888643          47899


Q ss_pred             EEEeCCCCccccceeeccc-------cccEEEEEeCCCeEEEEe--cCCcEEEEEcCCCCccccccccCCCeEEEEEecc
Q psy8152          68 KIYDTDFKNFNTNTDVSFG-------EGDIVGVSRYDECILTAV--KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH  138 (444)
Q Consensus        68 ~vw~~~~~~~~~~~~~~~~-------~~~v~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  138 (444)
                      ++||+.+++.+..+..+..       ......+++++++++++.  .+..+.+|+..+++.+..+..+. ...  .+...
T Consensus        81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~  157 (355)
T d2bbkh_          81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-CYH--IFPTA  157 (355)
T ss_dssp             EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-EEE--EEEEE
T ss_pred             EEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCC-cce--EeecC
Confidence            9999999988876653221       123467899999887765  45789999999888765333222 111  11112


Q ss_pred             CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152         139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI  218 (444)
Q Consensus       139 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  218 (444)
                      ....+..+.|+...++.......+........            .......+....+.+++..++.++.++.+++|++. 
T Consensus       158 ~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-  224 (355)
T d2bbkh_         158 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF------------HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLS-  224 (355)
T ss_dssp             TTEEEEEETTSCEEEEECCSSSCCEEEECCCC------------SCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECT-
T ss_pred             CcceEEEcCCCCEEEEEecCCCeEEEEecccc------------cceecceeeeccccCCCCeEEEecCCCeEEEEecC-
Confidence            23333344455544444433222111111000            00011135566788888899999999999999998 


Q ss_pred             CCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcCC----------CcEEEEEcCCCCcceeEeccccCce
Q psy8152         219 TTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGSTT----------GDMMAVDLRGKGKPCYKYKGFAGCV  278 (444)
Q Consensus       219 ~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~h~~~i  278 (444)
                      ......+.....+          ......++++|++..++....+          ..|.+||+.+ ++.+.++.. ...+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t-~~~~~~~~~-~~~~  302 (355)
T d2bbkh_         225 SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEI  302 (355)
T ss_dssp             TSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEE
T ss_pred             CCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC-CcEEEEecC-CCCE
Confidence            2222222222222          1233568899999888775443          3699999999 898888873 4568


Q ss_pred             eEEEecCCCC--EEEEEECCCcEEEEEcCCCceEEEee-cCCceeEE
Q psy8152         279 KDIACPLNEN--LILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSI  322 (444)
Q Consensus       279 ~~~~~s~~~~--~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~  322 (444)
                      .+++|+|+|+  ++++++.++.|+|||+.+++.+.++. +......+
T Consensus       303 ~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i  349 (355)
T d2bbkh_         303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVI  349 (355)
T ss_dssp             CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEE
T ss_pred             EEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEE
Confidence            8999999997  45667789999999999999998886 33333444

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.84  E-value=3.2e-18  Score=155.72  Aligned_cols=287  Identities=8%  Similarity=-0.066  Sum_probs=202.5

Q ss_pred             CcccceEEEeeeccCCcEEEEEE-----cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------
Q psy8152          40 TNKASVLALNWGNVEESELLIAY-----SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------  104 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~-----~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------  104 (444)
                      .+..++.+++++ |+++.+++..     ..+.|.+||..+++.+..+.  .+..+...++|+|++|++++          
T Consensus        18 ~~~~p~~~~a~s-pdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~--~~~~~~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          18 AADGPTNDEAPG-ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN--GGFLPNPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             cCCCCccccccC-CCCCEEEEEcccccCCCceEEEEECCCCCEEEEEe--CCCCccEEEcCCCCEEEEEeecCCcccccc
Confidence            678899999999 7999887642     34679999999999988765  45566688999999998875          


Q ss_pred             cCCcEEEEEcCCCCccccccccCCCe-------EEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeecccceeeEe
Q psy8152         105 KSGDVKLWRYKTEPDQWTNFNVGPQL-------ECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKNVSHRVLVY  175 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  175 (444)
                      .++.|.+||+.+++.+.....+....       ..+.|+++++.++...  .++.+.+|+....+......         
T Consensus        95 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------  165 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS---------  165 (373)
T ss_pred             cceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec---------
Confidence            35789999999998876544444333       4577888877665544  35678888887766543332         


Q ss_pred             eeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEEeCC------CCCeeEEEEccCCCEEE
Q psy8152         176 SVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------DVALSCITTTNQSHYVI  248 (444)
Q Consensus       176 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~  248 (444)
                                   ...++.++|+++ .+++.+.|+.+.+|+..   ..........+      ......+.+.+++.+ +
T Consensus       166 -------------~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  228 (373)
T d2madh_         166 -------------SPTCYHIHPGAPSTFYLLCAQGGLAKTDHA---GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI-V  228 (373)
T ss_pred             -------------cceeEEEecCCCcEEEEEcCCCeEEEEEcC---CceeeEEEeeeccccCccceeeeEEECCCceE-E
Confidence                         356788999985 55688899999999988   44444433221      222344556666644 4


Q ss_pred             EEcCCCcEEEEEcCCCCccee--Eecccc----------CceeEEEecCCCCEE----------EEEECCCcEEEEEcCC
Q psy8152         249 VGSTTGDMMAVDLRGKGKPCY--KYKGFA----------GCVKDIACPLNENLI----------LSVSLDRHFRVHDFHS  306 (444)
Q Consensus       249 ~~~~dg~i~iwd~~~~~~~~~--~~~~h~----------~~i~~~~~s~~~~~l----------~s~~~dg~i~vw~~~~  306 (444)
                      ..+.++.+++|+... .....  .+..+.          .....+++++++..+          ++...++.|.+||+.+
T Consensus       229 ~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t  307 (373)
T d2madh_         229 WPVYSGKILQADISA-AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV  307 (373)
T ss_pred             EecCCceEEEEEcCC-CeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCC
Confidence            556788899999876 43321  111111          223344566655543          4555677899999999


Q ss_pred             CceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         307 KKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      ++.+..+.+...+..++|+++-       +..++++++.+++|++||+.+++.....
T Consensus       308 ~~~~~~~~~~~~~~~~a~spDG-------~~~l~vt~~~d~~v~v~D~~tg~~~~~~  357 (373)
T d2madh_         308 GQTSSQISLGHDVDAISVAQDG-------GPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CcEEEEecCCCCeeEEEECCCC-------CEEEEEEeCCCCeEEEEECCCCCEEEEE
Confidence            9999999888899999998662       1125678999999999999988776544

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.83  E-value=3.5e-17  Score=148.75  Aligned_cols=293  Identities=10%  Similarity=-0.012  Sum_probs=195.5

Q ss_pred             CCcccEEEe-----cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----------CCeEE
Q psy8152           4 ADDYNIYIG-----SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----------GQKIK   68 (444)
Q Consensus         4 ~~~~~l~~g-----~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----------d~~i~   68 (444)
                      +++..+++.     +..+.|.+||..+++..    ..+.  .+.  ...++|+ |++++|++++.          ++.|.
T Consensus        30 pdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~----~~~~--~~~--~~~~a~S-pDG~~l~va~~~~~~~~~~~~~~~v~  100 (373)
T d2madh_          30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSIL----GHVN--GGF--LPNPVAA-HSGSEFALASTSFSRIAKGKRTDYVE  100 (373)
T ss_pred             CCCCEEEEEcccccCCCceEEEEECCCCCEE----EEEe--CCC--CccEEEc-CCCCEEEEEeecCCcccccccceEEE
Confidence            455666554     23467999998888741    2222  232  3379999 79999998753          57899


Q ss_pred             EEeCCCCccccceeecccc-------ccEEEEEeCCCeEEEEe--cCCcEEEEEcCCCCccccccccCCCeEEEEEeccC
Q psy8152          69 IYDTDFKNFNTNTDVSFGE-------GDIVGVSRYDECILTAV--KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS  139 (444)
Q Consensus        69 vw~~~~~~~~~~~~~~~~~-------~~v~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  139 (444)
                      +||..+++.+..+..+...       ..-..++++++.++...  .++.+.+|+....+..    .+.....++.++|++
T Consensus       101 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~g  176 (373)
T d2madh_         101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDD----QLLSSPTCYHIHPGA  176 (373)
T ss_pred             EEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEE----EEeccceeEEEecCC
Confidence            9999999988776533221       12245678887765554  3567888887765543    344456788999977


Q ss_pred             CE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152         140 NI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI  218 (444)
Q Consensus       140 ~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~  218 (444)
                      +. +++.+.|+.+.+|+...+............            .........+.+.+++ .++..+.++.+.+|+.. 
T Consensus       177 ~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~-  242 (373)
T d2madh_         177 PSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLT------------AAQNLLTQPAQANKSG-RIVWPVYSGKILQADIS-  242 (373)
T ss_pred             CcEEEEEcCCCeEEEEEcCCceeeEEEeeeccc------------cCccceeeeEEECCCc-eEEEecCCceEEEEEcC-
Confidence            65 467888999999999987766554332210            0000123445555554 44556678899999887 


Q ss_pred             CCCccceEEEeCC----------CCCeeEEEEccCCCEE----------EEEcCCCcEEEEEcCCCCcceeEeccccCce
Q psy8152         219 TTQRRPVLKVDIP----------DVALSCITTTNQSHYV----------IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCV  278 (444)
Q Consensus       219 ~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l----------~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i  278 (444)
                      ......+..+..+          ......++++|++..+          ++...++.+.+||+.+ ++.+..+. +...+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t-~~~~~~~~-~~~~~  320 (373)
T d2madh_         243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQIS-LGHDV  320 (373)
T ss_pred             CCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCC-CcEEEEec-CCCCe
Confidence            2221222222111          1223345566655544          4456677899999999 88888876 56678


Q ss_pred             eEEEecCCCC--EEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEc
Q psy8152         279 KDIACPLNEN--LILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVR  325 (444)
Q Consensus       279 ~~~~~s~~~~--~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~  325 (444)
                      .+++|+|+|+  ++++++.|+.|+|||+.+++.+.++. +....+.+++.
T Consensus       321 ~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~  370 (373)
T d2madh_         321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM  370 (373)
T ss_pred             eEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEe
Confidence            9999999998  45688899999999999999999986 66667777654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.82  E-value=2.7e-18  Score=154.96  Aligned_cols=288  Identities=12%  Similarity=-0.022  Sum_probs=198.4

Q ss_pred             EEEeeeccCCcEEEEEE-----cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEE
Q psy8152          46 LALNWGNVEESELLIAY-----SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVK  110 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~-----~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~  110 (444)
                      .-.+.+ |++..+++..     ....|.+||..+++.+..+.  .+..+..+|+|+|++|++++          .++.|+
T Consensus         5 ~~~a~s-pdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~--~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_           5 ILEAPA-PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMID--GGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             BCCCCC-CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEE--ECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             EeEeeC-CCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEE--CCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence            334556 7899887753     35679999999999888775  44556688999999887653          478999


Q ss_pred             EEEcCCCCcccccccc-------CCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         111 LWRYKTEPDQWTNFNV-------GPQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       111 iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      +||+.+++.+.....+       ......++|+|++++++++.  .+..+.+|+..+++.+..+......... .     
T Consensus        82 v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----  155 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIF-P-----  155 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEE-E-----
T ss_pred             EEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEe-e-----
Confidence            9999999877633322       23345689999999887764  4678999999999888776554331100 0     


Q ss_pred             ccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                           ......+.++++++.++.. ..++.+.+++..   ...     ..+...+....+.+++..++.++.++.+++|+
T Consensus       156 -----~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  222 (355)
T d2bbkh_         156 -----TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE---VFH-----PEDEFLINHPAYSQKAGRLVWPTYTGKIHQID  222 (355)
T ss_dssp             -----EETTEEEEEETTSCEEEEECCSSSCCEEEECC---CCS-----CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEE
T ss_pred             -----cCCcceEEEcCCCCEEEEEecCCCeEEEEecc---ccc-----ceecceeeeccccCCCCeEEEecCCCeEEEEe
Confidence                 0123445666666555433 334445555544   111     12333455677888888899999999999999


Q ss_pred             cCCCCcce--eEeccc----------cCceeEEEecCCCCEEEEEECC----------CcEEEEEcCCCceEEEeecCCc
Q psy8152         261 LRGKGKPC--YKYKGF----------AGCVKDIACPLNENLILSVSLD----------RHFRVHDFHSKKLLRKDYMQSR  318 (444)
Q Consensus       261 ~~~~~~~~--~~~~~h----------~~~i~~~~~s~~~~~l~s~~~d----------g~i~vw~~~~~~~~~~~~~~~~  318 (444)
                      +.. +...  .....+          ......+++++++..++....+          ..|.+||..+++.+.++.+...
T Consensus       223 ~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~  301 (355)
T d2bbkh_         223 LSS-GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE  301 (355)
T ss_dssp             CTT-SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred             cCC-CcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCC
Confidence            987 5432  111111          1233457899999887766543          3699999999999998888888


Q ss_pred             eeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         319 LTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       319 i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      +.+++|+++-       +..+++++..++.|++||..+++.....
T Consensus       302 ~~~~a~spDG-------~~~l~v~~~~d~~i~v~D~~tg~~~~~i  339 (355)
T d2bbkh_         302 IDSINVSQDE-------KPLLYALSTGDKTLYIHDAESGEELRSV  339 (355)
T ss_dssp             ECEEEECCSS-------SCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEEEEEcCCC-------CeEEEEEECCCCEEEEEECCCCCEEEEE
Confidence            8999988651       1225677888999999999988765533

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.1e-17  Score=147.48  Aligned_cols=279  Identities=10%  Similarity=0.060  Sum_probs=181.3

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeecccccc--EEEEEeCCCeEEEEe-cCCcEEEEEcCCCCccccc---cccCCCe
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGD--IVGVSRYDECILTAV-KSGDVKLWRYKTEPDQWTN---FNVGPQL  130 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~--v~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~---~~~~~~v  130 (444)
                      .+++++.+++|++|++.....+..++...|...  -++|+|+|++|++++ .++.|++|++.........   ..+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            456777899999999976544443332344444  457799999986555 5899999999876543322   2345567


Q ss_pred             EEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-C
Q psy8152         131 ECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-Q  208 (444)
Q Consensus       131 ~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d  208 (444)
                      ..++|+|+|++|++++. ++.|.+|+...............                ...+.++.++|+++++++++. +
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~----------------~~~~~~v~~s~d~~~~~~~~~~~  149 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG----------------LDGCHSANISPDNRTLWVPALKQ  149 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC----------------CTTBCCCEECTTSSEEEEEEGGG
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCC----------------CccceEEEeeecceeeecccccc
Confidence            88999999999998875 67899998877554433322111                125788999999988776654 5


Q ss_pred             ceEEEEEcCCCCCccceE----EEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcce---eEec------cc
Q psy8152         209 GYVRVYDPKITTQRRPVL----KVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPC---YKYK------GF  274 (444)
Q Consensus       209 ~~i~i~d~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~---~~~~------~h  274 (444)
                      ..|.+|+... .......    ...........++|++++.+++. ....+...+|+.......+   ..+.      ..
T Consensus       150 ~~i~~~~~~~-~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  228 (333)
T d1ri6a_         150 DRICLFTVSD-DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD  228 (333)
T ss_dssp             TEEEEEEECT-TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred             ceeeEEEecc-CCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCc
Confidence            5799999871 1111111    11223445678999999888765 4556678888875511111   1111      12


Q ss_pred             cCceeEEEecCCCCEEEEE-ECCCcEEEEEcCCCceEEE----eecCCceeEEEEcCCCcccccchhhhhcc-ccccCCC
Q psy8152         275 AGCVKDIACPLNENLILSV-SLDRHFRVHDFHSKKLLRK----DYMQSRLTSILVRSDFSLENETKKEEQEH-SEEKGDS  348 (444)
Q Consensus       275 ~~~i~~~~~s~~~~~l~s~-~~dg~i~vw~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~  348 (444)
                      ......+++++++++++.. ..++.+.+|++........    ......+..++|+++         +++++ ++..++.
T Consensus       229 ~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spD---------Gk~l~va~~~~~~  299 (333)
T d1ri6a_         229 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHS---------GKYLIAAGQKSHH  299 (333)
T ss_dssp             CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTT---------SSEEEEECTTTCE
T ss_pred             cccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCC---------CCEEEEEECCCCe
Confidence            3456778999999866655 4577899999876433222    224456778888744         66554 4566799


Q ss_pred             ccccCC--Ccccccc
Q psy8152         349 DEKYDP--EHFEMNQ  361 (444)
Q Consensus       349 i~~W~~--~~~~~~~  361 (444)
                      |++|++  .++.+.+
T Consensus       300 v~v~~id~~tG~l~~  314 (333)
T d1ri6a_         300 ISVYEIVGEQGLLHE  314 (333)
T ss_dssp             EEEEEEETTTTEEEE
T ss_pred             EEEEEEECCCCcEEE
Confidence            999955  4454443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.71  E-value=1.2e-15  Score=138.33  Aligned_cols=283  Identities=9%  Similarity=-0.044  Sum_probs=180.4

Q ss_pred             ecCCCc--EEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeEEEEeCCCCcccc
Q psy8152          12 GSSTGA--FKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKIKIYDTDFKNFNT   79 (444)
Q Consensus        12 g~~dg~--i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i~vw~~~~~~~~~   79 (444)
                      ...+|.  |.+||..+++.    +..+.  .+..  ..++|+ |++++|++++          .++.|++||..+++.+.
T Consensus        40 ~~~~g~~~~~~~d~~~~~~----~~~~~--~~~~--~~~a~s-pDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~  110 (368)
T d1mdah_          40 AYFAGTTENWVSCAGCGVT----LGHSL--GAFL--SLAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA  110 (368)
T ss_dssp             TTTCSSEEEEEEETTTTEE----EEEEE--ECTT--CEEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred             ccCCCcceEEEEeCCCCcE----EEEEe--CCCC--CcceEC-CCCCEEEEEcccCccccccccCCeEEEEECCCCcEee
Confidence            445555  55557666663    22222  2232  358899 7999988764          36789999999999888


Q ss_pred             ceeeccc-------cccEEEEEeCCCeEEEEe-cCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCe
Q psy8152          80 NTDVSFG-------EGDIVGVSRYDECILTAV-KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKEND  150 (444)
Q Consensus        80 ~~~~~~~-------~~~v~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~  150 (444)
                      .+..+.+       ...-.+|+|+|++|+++. .++.+.+||+.+++.......+...    .+.| ....++..+.||.
T Consensus       111 ~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~Dg~  186 (368)
T d1mdah_         111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCF----HIHPGAAATHYLGSCPAS  186 (368)
T ss_dssp             EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCC----CCEEEETTEEECCCCTTS
T ss_pred             eecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcc----eEccCCCceEEEEcCCCC
Confidence            7754322       223478999999988776 5799999999998877644333222    1222 4556777788899


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI  230 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  230 (444)
                      +.+|++..............            .......+..+.+.+++..+.+.  .+.++++++. ......+.....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~-~~~~~~~~~~~~  251 (368)
T d1mdah_         187 LAASDLAAAPAAAGIVGAQC------------TGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIP-AAGATMKAAIDG  251 (368)
T ss_dssp             CEEEECCSSCCCCEECCCCS------------CTTSCBCSCCEEETTTTEEEECB--SSCCEEEECC-SSCCEEECCCCS
T ss_pred             EEEEEecCCceeeeeeeccc------------ccccccceeecccccCcEEEEec--CCCEEEEeec-CCceEEEeeccc
Confidence            88888876433222111100            00011234556677776555443  4556666665 111111111111


Q ss_pred             C----------CCCeeEEEEccCCCEEEEEcCC---------CcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-E-
Q psy8152         231 P----------DVALSCITTTNQSHYVIVGSTT---------GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-L-  289 (444)
Q Consensus       231 ~----------~~~i~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~-  289 (444)
                      +          ......++++|++..++....+         ..|.+||..+ ++.+.++. +...+.+++|+|+|+ + 
T Consensus       252 ~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t-~~~~~~~~-~~~~~~~~a~spDG~~~l  329 (368)
T d1mdah_         252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPIS-NGHDSDAIIAAQDGASDN  329 (368)
T ss_dssp             SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCE-EEEEECEEEECCSSSCEE
T ss_pred             ccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCC-CcEeEEec-CCCceeEEEECCCCCEEE
Confidence            1          1123457889998877664322         3599999999 88888887 345788999999996 3 


Q ss_pred             EEEEECCCcEEEEEcCCCceEEEeecCCceeEEEE
Q psy8152         290 ILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILV  324 (444)
Q Consensus       290 l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~  324 (444)
                      ++++..++.|++||..+++.+.++......+.+++
T Consensus       330 y~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~  364 (368)
T d1mdah_         330 YANSAGTEVLDIYDAASDQDQSSVELDKGPESLSV  364 (368)
T ss_dssp             EEEETTTTEEEEEESSSCEEEEECCCCSCCCEEEC
T ss_pred             EEEeCCCCeEEEEECCCCCEEEEEECCCCCCEEEE
Confidence            45667789999999999999998876665666654

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.67  E-value=1.7e-15  Score=137.18  Aligned_cols=289  Identities=9%  Similarity=-0.051  Sum_probs=189.9

Q ss_pred             CcccceEEEeeeccCCcEEEE---EEcCC--eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------
Q psy8152          40 TNKASVLALNWGNVEESELLI---AYSGQ--KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------  104 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~---~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------  104 (444)
                      .+.++...++.. ++++....   +..++  .|.+||..+++.+..+.  .+..+...++|+|+.|++++          
T Consensus        17 ~~~g~~~~~a~~-~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~--~~~~~~~a~spDg~~i~~~~~~~~~~~~g~   93 (368)
T d1mdah_          17 ASDGSSCDHGPG-AISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSL--GAFLSLAVAGHSGSDFALASTSFARSAKGK   93 (368)
T ss_dssp             CCCCCCBCCCCC-CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE--ECTTCEEEECTTSSCEEEEEEEETTTTSSS
T ss_pred             ccCCCccccccC-CCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEe--CCCCCcceECCCCCEEEEEcccCccccccc
Confidence            345566666666 56665332   33334  47777999999888775  34455788999999988765          


Q ss_pred             cCCcEEEEEcCCCCcccccccc-------CCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeeeeeecccceeeEee
Q psy8152         105 KSGDVKLWRYKTEPDQWTNFNV-------GPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIFSAKNVSHRVLVYS  176 (444)
Q Consensus       105 ~dg~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  176 (444)
                      .++.|.+||..+++.+..+..+       ......++|+|+|++|+++. .++.+.+||+.+++.+..+..+..      
T Consensus        94 ~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~------  167 (368)
T d1mdah_          94 RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASC------  167 (368)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSC------
T ss_pred             cCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCc------
Confidence            3678999999998877633322       22335789999999998776 579999999999988877755443      


Q ss_pred             eCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE----EEeCCCCCeeEEEEccCCCEEEEEcC
Q psy8152         177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL----KVDIPDVALSCITTTNQSHYVIVGST  252 (444)
Q Consensus       177 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~  252 (444)
                                  ..   .+......++..+.||.+.++++.. .......    .+..+...+..+.+.+++..+++.  
T Consensus       168 ------------~~---~~~~~~~~~v~~~~Dg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--  229 (368)
T d1mdah_         168 ------------FH---IHPGAAATHYLGSCPASLAASDLAA-APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--  229 (368)
T ss_dssp             ------------CC---CEEEETTEEECCCCTTSCEEEECCS-SCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--
T ss_pred             ------------ce---EccCCCceEEEEcCCCCEEEEEecC-CceeeeeeecccccccccceeecccccCcEEEEec--
Confidence                        11   1111225666677788888888761 1111111    112233445567788887666544  


Q ss_pred             CCcEEEEEcCCCCcceeEec--cc----------cCceeEEEecCCCCEEEEEECC---------CcEEEEEcCCCceEE
Q psy8152         253 TGDMMAVDLRGKGKPCYKYK--GF----------AGCVKDIACPLNENLILSVSLD---------RHFRVHDFHSKKLLR  311 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~--~h----------~~~i~~~~~s~~~~~l~s~~~d---------g~i~vw~~~~~~~~~  311 (444)
                      .+.++++++.. ........  .+          ......++++|++..++....+         ..|.+||..+++.+.
T Consensus       230 ~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~  308 (368)
T d1mdah_         230 ASSILQGDIPA-AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG  308 (368)
T ss_dssp             SSCCEEEECCS-SCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred             CCCEEEEeecC-CceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeE
Confidence            45566777655 33322111  11          1223457889998876655432         359999999999998


Q ss_pred             EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         312 KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      ++.+...+.+++|+++-       +..++++...++.|++||..+++.....
T Consensus       309 ~~~~~~~~~~~a~spDG-------~~~ly~s~~~~~~v~v~D~~tgk~~~~i  353 (368)
T d1mdah_         309 PISNGHDSDAIIAAQDG-------ASDNYANSAGTEVLDIYDAASDQDQSSV  353 (368)
T ss_dssp             CCEEEEEECEEEECCSS-------SCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred             EecCCCceeEEEECCCC-------CEEEEEEeCCCCeEEEEECCCCCEEEEE
Confidence            88877888899988662       1224577788999999999988766544

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.64  E-value=1.2e-14  Score=131.10  Aligned_cols=285  Identities=8%  Similarity=0.000  Sum_probs=170.3

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeeeec-------------------------ccCcccceEEEeeeccCCcEEEEEE
Q psy8152           8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVK-------------------------YITNKASVLALNWGNVEESELLIAY   62 (444)
Q Consensus         8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~-------------------------~~~h~~~v~~~~~~~~~~~~l~~~~   62 (444)
                      .+++|+.+|.|++|++.+.+. .+.+..+.                         ...|.-.+....++ |+|++|++..
T Consensus        13 ~f~Sgg~sG~V~V~dlpS~r~-l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gt-pDGr~lfV~d   90 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVPSMRE-LMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGR-YDGKYLFIND   90 (441)
T ss_dssp             EEEECBTTCCEEEEEETTTEE-EEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTE-EEEEEEEEEE
T ss_pred             EEEeCCCCCcEEEEeCCCCcE-EEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceeccc-CCCCEEEEEc
Confidence            467788999999999988765 22222211                         00244455666678 7899997665


Q ss_pred             -cCCeEEEEeCCCCccccceeecc-ccccEEEEEeCCCe--EEEEecCC-----------------cEEEEEcCCCCccc
Q psy8152          63 -SGQKIKIYDTDFKNFNTNTDVSF-GEGDIVGVSRYDEC--ILTAVKSG-----------------DVKLWRYKTEPDQW  121 (444)
Q Consensus        63 -~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~--l~~~~~dg-----------------~i~iw~~~~~~~~~  121 (444)
                       .+++|.++|+.+++....+..+. ....-.+++|+++.  ++..+.+.                 .+..+|..+.+...
T Consensus        91 ~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~  170 (441)
T d1qnia2          91 KANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAW  170 (441)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEE
T ss_pred             CCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeE
Confidence             57899999999999888776542 23334667888874  33333321                 23457777776664


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCC-eEEEEEcCCceeeeeee------------------cccceeeEeeeCCC-c
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKEN-DLKLWDLNTTKNIFSAK------------------NVSHRVLVYSVKPD-E  181 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~  181 (444)
                      .. ........+.|+|+|+++++++.+. .+..++..+.+....+.                  .....+..+..... .
T Consensus       171 qI-~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~  249 (441)
T d1qnia2         171 QV-IVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESE  249 (441)
T ss_dssp             EE-EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCS
T ss_pred             EE-ecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCc
Confidence            32 3345678899999999998877542 11111111111000000                  00000111110000 0


Q ss_pred             --ccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCC-----CCC---ccceEEEeCCCCCeeEEEEccCCCEEEEE
Q psy8152         182 --FDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKI-----TTQ---RRPVLKVDIPDVALSCITTTNQSHYVIVG  250 (444)
Q Consensus       182 --~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~-----~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  250 (444)
                        ...........+.++|+|++++ ++..+++|.+||+.+     ...   ...+.......-.....+|.++|+.+.+.
T Consensus       250 v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~  329 (441)
T d1qnia2         250 FTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTL  329 (441)
T ss_dssp             SEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEE
T ss_pred             eEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcc
Confidence              0011122367899999998765 567799999999871     000   01111111111223456899999888889


Q ss_pred             cCCCcEEEEEcCC---------CCcceeEe-----ccccCceeEEEecCCCCEEEEEEC
Q psy8152         251 STTGDMMAVDLRG---------KGKPCYKY-----KGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       251 ~~dg~i~iwd~~~---------~~~~~~~~-----~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      ..|..|..|++..         ....+..+     .+|...+.+.+++|+|++|++++.
T Consensus       330 ~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k  388 (441)
T d1qnia2         330 FIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK  388 (441)
T ss_dssp             TTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred             cccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence            9999999999742         01233333     477777778889999999999953

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.63  E-value=7.4e-14  Score=130.69  Aligned_cols=344  Identities=10%  Similarity=0.008  Sum_probs=188.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc---------CCeEEEEeCCCCc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS---------GQKIKIYDTDFKN   76 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---------d~~i~vw~~~~~~   76 (444)
                      +.+++  ..++.|.+|++.+++.. ..+.......|...|.++.|| |++++|+.++.         ++.+.|||+.+++
T Consensus        28 ~~~~~--~~~~~~~~~~~~t~~~~-~~~~~~~~~~~~~~i~~~~~S-pDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~  103 (470)
T d2bgra1          28 HEYLY--KQENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSIS-PDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ  103 (470)
T ss_dssp             SEEEE--ESSSCEEEEETTTCCEE-EEECTTTTTTSSSCCCEEEEC-TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred             CEEEE--EcCCcEEEEECCCCCEE-EEEchhhhhhccCccceeEEC-CCCCEEEEEECCcceeeeccCceEEEEECCCCc
Confidence            34444  34788999999998841 112111112677899999999 79999998753         5678999999887


Q ss_pred             cccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc------------------CCCeEEEEEecc
Q psy8152          77 FNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV------------------GPQLECMKHNKH  138 (444)
Q Consensus        77 ~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------------------~~~v~~~~~~~~  138 (444)
                      .... ..+........+||+|++||.. .++.+++|+..+++.......+                  .+....+.|+|+
T Consensus       104 ~~~l-~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPD  181 (470)
T d2bgra1         104 LITE-ERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN  181 (470)
T ss_dssp             ECCS-SCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT
T ss_pred             cccc-ccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCC
Confidence            6543 3223234446679999999985 5678999999888765422211                  223456889999


Q ss_pred             CCEEEEeeCCCe-EEEEEcC---Cc---e-eeeeee--ccc-----ceeeEeeeCCCc--------------ccccCccc
Q psy8152         139 SNIIATGGKEND-LKLWDLN---TT---K-NIFSAK--NVS-----HRVLVYSVKPDE--------------FDLRRPVW  189 (444)
Q Consensus       139 ~~~l~~~~~d~~-i~vwd~~---~~---~-~~~~~~--~~~-----~~~~~~~~~~~~--------------~~~~~~~~  189 (444)
                      |+.|++...|.. +..|.+.   ..   . .....+  ...     ..+..+......              ........
T Consensus       182 Gk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (470)
T d2bgra1         182 GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY  261 (470)
T ss_dssp             SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEE
T ss_pred             CCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCce
Confidence            999999876543 4444332   10   0 111111  000     011111111100              00111123


Q ss_pred             eeEEEEecCCCEEEEE-eC--C-ceEEEEEcCCCCCccceEE------EeCCCCC-----eeEEEEccC--CCEEEEEcC
Q psy8152         190 VNGISFLPNSDKVAVC-SK--Q-GYVRVYDPKITTQRRPVLK------VDIPDVA-----LSCITTTNQ--SHYVIVGST  252 (444)
Q Consensus       190 i~~~~~~~~~~~l~~~-~~--d-~~i~i~d~~~~~~~~~~~~------~~~~~~~-----i~~~~~~~~--~~~l~~~~~  252 (444)
                      +..+.|.+++..++.. ..  + ..+.+|++. .........      .......     -....|.++  +.+++.+..
T Consensus       262 ~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d-~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~  340 (470)
T d2bgra1         262 LCDVTWATQERISLQWLRRIQNYSVMDICDYD-ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE  340 (470)
T ss_dssp             EEEEEEEETTEEEEEEEESSTTEEEEEEEEEE-TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT
T ss_pred             EEEEEEcCCCceeEEEeeccCCceEEEEEEec-CCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEecc
Confidence            6778899888655543 22  2 234555543 112221111      0011110     112234443  344566777


Q ss_pred             CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE-EEEECCC----cEEEE--EcCCCceEEEe-----ecCCcee
Q psy8152         253 TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI-LSVSLDR----HFRVH--DFHSKKLLRKD-----YMQSRLT  320 (444)
Q Consensus       253 dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l-~s~~~dg----~i~vw--~~~~~~~~~~~-----~~~~~i~  320 (444)
                      +|..+||.+...+.....+..+...|..+ ++++++.+ ++++.++    .-+||  ++..+.....+     .+...+.
T Consensus       341 dg~~~ly~~~~~g~~~~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~  419 (470)
T d2bgra1         341 EGYRHICYFQIDKKDCTFITKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYY  419 (470)
T ss_dssp             TSCEEEEEEETTCSCCEESCCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBE
T ss_pred             CcCceeEEEeccCCceeeeccCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCCCEE
Confidence            87766654433245555555455567766 33444433 4443322    22344  44544433333     2556788


Q ss_pred             EEEEcCCCcccccchhhhhcc---ccccCCCccccCCCccccccccccc
Q psy8152         321 SILVRSDFSLENETKKEEQEH---SEEKGDSDEKYDPEHFEMNQVTREN  366 (444)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~---s~~~d~~i~~W~~~~~~~~~~~~~~  366 (444)
                      .++|+++         +++++   ++...-.+++|+...++...+++.+
T Consensus       420 s~~fSpd---------gky~~~~~s~~~~P~~~l~~~~~g~~v~~le~n  459 (470)
T d2bgra1         420 SVSFSKE---------AKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDN  459 (470)
T ss_dssp             EEEECTT---------SSEEEEEECSBSSCEEEEEETTTTEEEEEEECC
T ss_pred             EEEECCC---------CCEEEEEecCCCCCeEEEEECCCCCEEEEEecc
Confidence            8888855         56655   5555566888888887777666443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.59  E-value=6.5e-13  Score=119.64  Aligned_cols=269  Identities=7%  Similarity=-0.066  Sum_probs=171.0

Q ss_pred             EEEEEcCCeEEEEeCCCCccccceeec----------------------------cccccEEE--EEeCCCeEEEEe-cC
Q psy8152          58 LLIAYSGQKIKIYDTDFKNFNTNTDVS----------------------------FGEGDIVG--VSRYDECILTAV-KS  106 (444)
Q Consensus        58 l~~~~~d~~i~vw~~~~~~~~~~~~~~----------------------------~~~~~v~~--~s~~~~~l~~~~-~d  106 (444)
                      +++++.+|.|++|++.+++.++.+...                            .|......  .+|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            556778899999999888776655221                            11122222  268999886654 67


Q ss_pred             CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCE--EEEeeCCC-----------------eEEEEEcCCceeeeeee
Q psy8152         107 GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNI--IATGGKEN-----------------DLKLWDLNTTKNIFSAK  166 (444)
Q Consensus       107 g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~--l~~~~~d~-----------------~i~vwd~~~~~~~~~~~  166 (444)
                      +.|.++|+.++++...+ ..+...+..++|+|+++.  ++..+.+.                 .+..+|..+.+...++.
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~  173 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI  173 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence            89999999999877533 456788999999998874  44433322                 23457777766666555


Q ss_pred             cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC--------------------------------------
Q psy8152         167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ--------------------------------------  208 (444)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------------------------------  208 (444)
                      ....                   +..+.|+|+|+++++.+.+                                      
T Consensus       174 v~~~-------------------p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v  234 (441)
T d1qnia2         174 VDGN-------------------LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI  234 (441)
T ss_dssp             ESSC-------------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCC
T ss_pred             cCCC-------------------ccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEe
Confidence            4333                   5566777777666655432                                      


Q ss_pred             ---ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcc--------eeEeccc--
Q psy8152         209 ---GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKP--------CYKYKGF--  274 (444)
Q Consensus       209 ---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~--------~~~~~~h--  274 (444)
                         +.+.++...   ....+..+..... ...+.++|+|+++++ +..+++|.|||+.+ ...        ...+.++  
T Consensus       235 ~~~~v~vvd~~~---~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k-~~~~~~~~~~~~~~~~~~~~  309 (441)
T d1qnia2         235 GDSKVPVVDGRG---ESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDK-LDDLFEDKIELRDTIVAEPE  309 (441)
T ss_dssp             TTCCCCEEECSS---SCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGG-HHHHTTTSSCGGGGEEECCB
T ss_pred             CCCCcEEEEccc---CCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeeh-hhhHhhccCCcceEEEeecc
Confidence               344444444   4455556665544 578999999998755 78899999999875 211        1111111  


Q ss_pred             -cCceeEEEecCCCCEEEEEECCCcEEEEEcCC----------CceEEEeecCCceeEEEE--cCCCcccccchhhhhcc
Q psy8152         275 -AGCVKDIACPLNENLILSVSLDRHFRVHDFHS----------KKLLRKDYMQSRLTSILV--RSDFSLENETKKEEQEH  341 (444)
Q Consensus       275 -~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~----------~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~  341 (444)
                       .-.....+|.++|..+.+...|..|..|++..          ...+.++.....+-.+..  ...+     .|++++|+
T Consensus       310 ~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~-----~pdGk~l~  384 (441)
T d1qnia2         310 LGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESR-----DADGKWLV  384 (441)
T ss_dssp             CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTST-----TCCCCEEE
T ss_pred             cccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCcccccccc-----CCCCcEEE
Confidence             11234568999998888999999999999842          123334332222333322  2233     38899999


Q ss_pred             ccccCCCccccCCC
Q psy8152         342 SEEKGDSDEKYDPE  355 (444)
Q Consensus       342 s~~~d~~i~~W~~~  355 (444)
                      +++.-..-|++.+-
T Consensus       385 s~~k~s~dr~~~~g  398 (441)
T d1qnia2         385 VLSKFSKDRFLPVG  398 (441)
T ss_dssp             EEESCCGGGSCCCS
T ss_pred             ecCccccccCcCCC
Confidence            99655555666553

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.48  E-value=2.1e-11  Score=113.71  Aligned_cols=291  Identities=10%  Similarity=-0.029  Sum_probs=158.0

Q ss_pred             CCcccEEEec---------CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC
Q psy8152           4 ADDYNIYIGS---------STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF   74 (444)
Q Consensus         4 ~~~~~l~~g~---------~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~   74 (444)
                      +++++|+.++         ..+.+.+|++.+++.     ..+.  .|...+..+.|| |++++||... ++.+++|+..+
T Consensus        71 pDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-----~~l~--~~~~~~~~~~~S-PDG~~ia~~~-~~~l~~~~~~~  141 (470)
T d2bgra1          71 PDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-----ITEE--RIPNNTQWVTWS-PVGHKLAYVW-NNDIYVKIEPN  141 (470)
T ss_dssp             TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-----CCSS--CCCTTEEEEEEC-SSTTCEEEEE-TTEEEEESSTT
T ss_pred             CCCCEEEEEECCcceeeeccCceEEEEECCCCcc-----cccc--cCCccccccccc-cCcceeeEee-cccceEEECCC
Confidence            4666777663         357889999998872     2333  678899999999 8999999864 57999999988


Q ss_pred             Cccccceeecc------------------ccccEEEEEeCCCeEEEEecCCc-EEEEE----------------------
Q psy8152          75 KNFNTNTDVSF------------------GEGDIVGVSRYDECILTAVKSGD-VKLWR----------------------  113 (444)
Q Consensus        75 ~~~~~~~~~~~------------------~~~~v~~~s~~~~~l~~~~~dg~-i~iw~----------------------  113 (444)
                      ++..+......                  .......++|+|++|+....|.. |..|.                      
T Consensus       142 g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (470)
T d2bgra1         142 LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA  221 (470)
T ss_dssp             SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred             CceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccc
Confidence            87654432110                  01233558999999998765433 33332                      


Q ss_pred             -------------cCCCCcccccc-----------ccCCCeEEEEEeccCCEEEEee-CC---CeEEEE--EcCCceeee
Q psy8152         114 -------------YKTEPDQWTNF-----------NVGPQLECMKHNKHSNIIATGG-KE---NDLKLW--DLNTTKNIF  163 (444)
Q Consensus       114 -------------~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~-~d---~~i~vw--d~~~~~~~~  163 (444)
                                   +..+.......           .....+..+.|.+++.+++... ..   ..+.++  |..++....
T Consensus       222 g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~  301 (470)
T d2bgra1         222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC  301 (470)
T ss_dssp             TSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred             cccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEE
Confidence                         22222111000           0112245566766665444322 11   122333  333333222


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      .......     ...+.+.-..+.  .....+.+++  .+++.+..+|..+||...  ........+..+...|..+ ++
T Consensus       302 ~~~~~~~-----~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~--~~g~~~~~lt~g~~~v~~~-~~  371 (470)
T d2bgra1         302 LVARQHI-----EMSTTGWVGRFR--PSEPHFTLDGNSFYKIISNEEGYRHICYFQ--IDKKDCTFITKGTWEVIGI-EA  371 (470)
T ss_dssp             CGGGCEE-----EECSSSCSSSSS--CCCCEECTTSSEEEEEEECTTSCEEEEEEE--TTCSCCEESCCSSSCEEEE-EE
T ss_pred             EEEEeee-----eeeccceeeccc--CCCceeeecCCCcEEEEeccCcCceeEEEe--ccCCceeeeccCCeeEEEE-EE
Confidence            1110000     000000000001  1122344444  345666777776666544  1233334444455566666 44


Q ss_pred             cCCCEE-EEEcCCC----c--EEEEEcCCCCcceeEe----ccccCceeEEEecCCCCEEEE---EECCCcEEEEEcCCC
Q psy8152         242 NQSHYV-IVGSTTG----D--MMAVDLRGKGKPCYKY----KGFAGCVKDIACPLNENLILS---VSLDRHFRVHDFHSK  307 (444)
Q Consensus       242 ~~~~~l-~~~~~dg----~--i~iwd~~~~~~~~~~~----~~h~~~i~~~~~s~~~~~l~s---~~~dg~i~vw~~~~~  307 (444)
                      ++++.+ ++++.++    .  |+-.++.. +.....+    ..|...+..++|||+|++++.   +...-.+.+|+..++
T Consensus       372 ~d~~~iyf~a~~~~~~p~~~~ly~v~~~g-~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g  450 (470)
T d2bgra1         372 LTSDYLYYISNEYKGMPGGRNLYKIQLSD-YTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND  450 (470)
T ss_dssp             ECSSEEEEEESCGGGCTTCBEEEEEETTC-TTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTT
T ss_pred             ECCCEEEEEEecCCCCcceEEEEEEECCC-CCceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCC
Confidence            444444 3444332    2  43334443 3333333    367888999999999998773   333456899999999


Q ss_pred             ceEEEee
Q psy8152         308 KLLRKDY  314 (444)
Q Consensus       308 ~~~~~~~  314 (444)
                      +.+..+.
T Consensus       451 ~~v~~le  457 (470)
T d2bgra1         451 KGLRVLE  457 (470)
T ss_dssp             EEEEEEE
T ss_pred             CEEEEEe
Confidence            9887764

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.45  E-value=3.9e-10  Score=100.92  Aligned_cols=281  Identities=12%  Similarity=0.083  Sum_probs=162.2

Q ss_pred             ccEEEecC--CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-ccccceee
Q psy8152           7 YNIYIGSS--TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-NFNTNTDV   83 (444)
Q Consensus         7 ~~l~~g~~--dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-~~~~~~~~   83 (444)
                      +.|++|+.  .+.|+++.+.............. ......+.-|+|+ +++++|+++.. +.+..|.+... ........
T Consensus         3 ~~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~-~~~~~~~s~la~s-~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~   79 (365)
T d1jofa_           3 HHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTE-IPQDEPISWMTFD-HERKNIYGAAM-KKWSSFAVKSPTEIVHEASH   79 (365)
T ss_dssp             EEEEEEESSSSCEEEEEEEETTTTEEEEEEEEE-CCTTCCCSEEEEC-TTSSEEEEEEB-TEEEEEEEEETTEEEEEEEE
T ss_pred             eEEEEEeecCCCCEEEEEEcCCCCeEEEeeeee-ccCCCCCCEEEEc-CCCCEEEEEeC-CcEEEEEEeCCCCeEEEeee
Confidence            46888865  56898888766553222222211 2345567789999 79999988765 57888877532 22222111


Q ss_pred             -ccccccEEEEEeCCCeE--EEEe-cCCcEEEEEcCCC------------Cccc-----cccccCCCeEEEEEeccCCEE
Q psy8152          84 -SFGEGDIVGVSRYDECI--LTAV-KSGDVKLWRYKTE------------PDQW-----TNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        84 -~~~~~~v~~~s~~~~~l--~~~~-~dg~i~iw~~~~~------------~~~~-----~~~~~~~~v~~~~~~~~~~~l  142 (444)
                       .+.......++++++.+  +++. ..+.|..+.+...            ....     ........+.++.|+|+++++
T Consensus        80 ~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l  159 (365)
T d1jofa_          80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL  159 (365)
T ss_dssp             ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred             cCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEE
Confidence             12222234456677643  2222 2345554443211            0100     011123357899999999988


Q ss_pred             EEeeC-CCeEEEEEcCCc-eeee--eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-EeCCceEEEEEcC
Q psy8152         143 ATGGK-ENDLKLWDLNTT-KNIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CSKQGYVRVYDPK  217 (444)
Q Consensus       143 ~~~~~-d~~i~vwd~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~  217 (444)
                      +++.. ...|.+|++... ....  ......                .....+.++|+|+++++.+ .-.+++|.+|++.
T Consensus       160 ~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~----------------~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~  223 (365)
T d1jofa_         160 YSADLTANKLWTHRKLASGEVELVGSVDAPD----------------PGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             EEEETTTTEEEEEEECTTSCEEEEEEEECSS----------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEeeCCCCEEEEEEccCCCceeeccceeecC----------------CCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence            87764 457888876542 2211  111110                0124889999999987754 4568899999987


Q ss_pred             CCCCccceEEE---eC--------------CCCCeeEEEEccCCCEEEEEcC------CCcEEEEEcCCCCcceeEec--
Q psy8152         218 ITTQRRPVLKV---DI--------------PDVALSCITTTNQSHYVIVGST------TGDMMAVDLRGKGKPCYKYK--  272 (444)
Q Consensus       218 ~~~~~~~~~~~---~~--------------~~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~--  272 (444)
                       ......+...   ..              +......+.++|+|++|+++..      .+.|..|++.. ...+....  
T Consensus       224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~-~g~~~~~~~~  301 (365)
T d1jofa_         224 -PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CGSIEKQLFL  301 (365)
T ss_dssp             -TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TSCEEEEEEE
T ss_pred             -CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC-CCceeeEeEe
Confidence             2222222221   10              1112457899999999988632      23477787765 32222111  


Q ss_pred             ----cccCceeEEEecC-CCCEEEEE-ECCCcEEEEEcCCCc
Q psy8152         273 ----GFAGCVKDIACPL-NENLILSV-SLDRHFRVHDFHSKK  308 (444)
Q Consensus       273 ----~h~~~i~~~~~s~-~~~~l~s~-~~dg~i~vw~~~~~~  308 (444)
                          .......+++++| +|++|+++ ..++.|.+|++....
T Consensus       302 ~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         302 SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             eEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence                1233457799998 78977766 467899999886543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.39  E-value=1.8e-10  Score=97.98  Aligned_cols=239  Identities=7%  Similarity=-0.055  Sum_probs=151.8

Q ss_pred             CcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152          40 TNKASVLALNWGNVEESELLIAY-SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP  118 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~  118 (444)
                      .+......|++. ++++.+++.. ..+.|..++..............+...-.++.+++.++++....+.+++++..+..
T Consensus        11 ~~~~~P~~vavd-~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~   89 (260)
T d1rwia_          11 DFRLSPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ   89 (260)
T ss_dssp             CSCCCEEEEEEC-TTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC
T ss_pred             CCcCCCCEEEEc-CCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccce
Confidence            455567899999 7888666644 45777777654332222211111233345677888887776666666666544444


Q ss_pred             ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152         119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP  197 (444)
Q Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  197 (444)
                      .+. .........++++.++++++++-.....+..++......... .....                   ...++++.|
T Consensus        90 ~~~-~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~p~~i~~~~  149 (260)
T d1rwia_          90 TVL-PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN-------------------DPDGVAVDN  149 (260)
T ss_dssp             EEC-CCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCC-------------------SCCEEEECT
T ss_pred             eee-eeeeeeecccccccccceeEeeccccccccccccccceeeeeeecccC-------------------CcceeeecC
Confidence            432 233345678999999988888777777777777655332211 11111                   367899999


Q ss_pred             CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-cccC
Q psy8152         198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAG  276 (444)
Q Consensus       198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~  276 (444)
                      +++++++....+.|..++..   .................|++.++|+++++....+.|..++...  .....+. ..-.
T Consensus       150 ~g~~~v~~~~~~~i~~~d~~---~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~--~~~~~~~~~~~~  224 (260)
T d1rwia_         150 SGNVYVTDTDNNRVVKLEAE---SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS--TTSTVLPFTGLN  224 (260)
T ss_dssp             TCCEEEEEGGGTEEEEECTT---TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTC--SCCEECCCCSCC
T ss_pred             CCCEeeeccccccccccccc---cceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCC--CeEEEEccCCCC
Confidence            99988888888899999987   2222221123334568899999999988888888888887654  2233332 2234


Q ss_pred             ceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152         277 CVKDIACPLNENLILSVSLDRHFRVHDF  304 (444)
Q Consensus       277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~  304 (444)
                      ....|+++++|.++++-..+++|+.++.
T Consensus       225 ~P~~i~~d~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         225 TPLAVAVDSDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             CeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence            5689999999988777666676665543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.32  E-value=3.5e-09  Score=90.25  Aligned_cols=236  Identities=8%  Similarity=-0.029  Sum_probs=140.3

Q ss_pred             eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC---cEEEEEcCCCCccccccccCCCeEEEEEeccCCEE
Q psy8152          66 KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG---DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        66 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      .|+|.|............. ....-.++||||+.||......   .+.+.+...+... ....+........|+|++..+
T Consensus        20 ~l~i~d~dG~~~~~l~~~~-~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i   97 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRSP-QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKL   97 (269)
T ss_dssp             EEEEEETTSCSCEEEEEES-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEE
T ss_pred             EEEEEcCCCCCcEEEecCC-CceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCee
Confidence            5777777644444443321 1223356899999998765543   4666676666654 466678888999999999988


Q ss_pred             EEeeC-CCe--EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCce--EEEEEc
Q psy8152         143 ATGGK-END--LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGY--VRVYDP  216 (444)
Q Consensus       143 ~~~~~-d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~--i~i~d~  216 (444)
                      +.... .+.  +..+...............                   ......+++++..++ +...++.  |.+.++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~  158 (269)
T d2hqsa1          98 AFALSKTGSLNLYVMDLASGQIRQVTDGRS-------------------NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI  158 (269)
T ss_dssp             EEEECTTSSCEEEEEETTTCCEEECCCCSS-------------------CEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred             eEeeecCCccceeecccccccceeeeeccc-------------------cccccccccccccceecccccCCceEeeeec
Confidence            87554 222  2223322222222222111                   244556777765444 4444554  455555


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      .   . .....+...........|+|+++.++..+.+ +...+|.... ......+..+........|+|+|++|+..+.
T Consensus       159 ~---~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~  233 (269)
T d2hqsa1         159 N---G-GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL-ATGGVQVLSSTFLDETPSLAPNGTMVIYSSS  233 (269)
T ss_dssp             T---S-SCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET-TTCCEEECCCSSSCEEEEECTTSSEEEEEEE
T ss_pred             c---c-ccceeeecccccccccccccccceeEEEeecCCceeeeEeec-ccccceEeecCccccceEECCCCCEEEEEEc
Confidence            5   2 2333344455667788999999988875544 3444444433 2222233335556678899999998875553


Q ss_pred             ---CCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152         296 ---DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD  327 (444)
Q Consensus       296 ---dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~  327 (444)
                         ...|+++++..+.........+.+...+|+|.
T Consensus       234 ~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         234 QGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             ETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred             CCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCCC
Confidence               34689999988776544445566677777753

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.29  E-value=2.1e-09  Score=92.26  Aligned_cols=238  Identities=11%  Similarity=0.092  Sum_probs=160.2

Q ss_pred             ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc----cccE--EEEEeC-CCeEEEE-ecCCcEEEEEcC
Q psy8152          44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG----EGDI--VGVSRY-DECILTA-VKSGDVKLWRYK  115 (444)
Q Consensus        44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~----~~~v--~~~s~~-~~~l~~~-~~dg~i~iw~~~  115 (444)
                      ....|+++ ++++.+++-...+.|++|+.. ++.+..+.....    ...-  ..+..+ +.++++. +.++.|.+++..
T Consensus        24 ~P~gvavd-~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  101 (279)
T d1q7fa_          24 EPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY  101 (279)
T ss_dssp             CEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred             CccEEEEc-CCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc
Confidence            46899999 688887777778999999975 666655532111    1111  222333 3344433 345567777654


Q ss_pred             CCCccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152         116 TEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS  194 (444)
Q Consensus       116 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  194 (444)
                       +.....+ .........+++.+++.++++....+.+.+++.. ++.+..+.....                ......++
T Consensus       102 -g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~----------------~~~~~~i~  163 (279)
T d1q7fa_         102 -GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH----------------LEFPNGVV  163 (279)
T ss_dssp             -SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTT----------------CSSEEEEE
T ss_pred             -ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-Cceeeccccccc----------------ccccceee
Confidence             4433222 2244567889999999888888777888888854 455554432221                12578889


Q ss_pred             EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccCCCEEEEEcC-CCcEEEEEcCCCCcceeEe
Q psy8152         195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQSHYVIVGST-TGDMMAVDLRGKGKPCYKY  271 (444)
Q Consensus       195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~  271 (444)
                      +.++++++++....+.|++|+..    ...+.++.  +.......|++.|+|+++++-.. ++.|.+|+. . ++.+.++
T Consensus       164 ~d~~g~i~v~d~~~~~V~~~d~~----G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~-G~~~~~~  237 (279)
T d1q7fa_         164 VNDKQEIFISDNRAHCVKVFNYE----GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-D-GQLISAL  237 (279)
T ss_dssp             ECSSSEEEEEEGGGTEEEEEETT----CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-T-SCEEEEE
T ss_pred             eccceeEEeeeccccceeeeecC----CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-C-CCEEEEE
Confidence            99999888888889999999987    44555553  23445789999999998877544 456999984 4 7877777


Q ss_pred             cc--ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152         272 KG--FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK  308 (444)
Q Consensus       272 ~~--h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~  308 (444)
                      ..  .......|++.|+|.+++ ++.++.|++|......
T Consensus       238 ~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         238 ESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             EESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred             eCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence            53  234578999999987554 5678999999987643

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.27  E-value=5.2e-09  Score=91.25  Aligned_cols=242  Identities=7%  Similarity=0.014  Sum_probs=151.6

Q ss_pred             cceEEEeeeccCCcEEEEEEc-------CCeEEEEeCCCCccccceeeccc----cccEEEEEeCCCeEEEEecCCcEEE
Q psy8152          43 ASVLALNWGNVEESELLIAYS-------GQKIKIYDTDFKNFNTNTDVSFG----EGDIVGVSRYDECILTAVKSGDVKL  111 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~-------d~~i~vw~~~~~~~~~~~~~~~~----~~~v~~~s~~~~~l~~~~~dg~i~i  111 (444)
                      ...-.++|. ++++++++...       +++|..|+..++...........    ...-..+.++++.|+++...+.|..
T Consensus        18 ~g~EGpa~d-~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~   96 (314)
T d1pjxa_          18 PGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV   96 (314)
T ss_dssp             TTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred             CCCeEeEEe-CCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEE
Confidence            345678899 78887776332       46798999887765433211110    1223556788888888887778888


Q ss_pred             EEcCCCCccccccccC----CCeEEEEEeccCCEEEEeeC---------------CCeEEEEEcCCceeeeeeeccccee
Q psy8152         112 WRYKTEPDQWTNFNVG----PQLECMKHNKHSNIIATGGK---------------ENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus       112 w~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~---------------d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      ++..............    ...+.+++.++|++.++-..               .|.|..++.. ++.........   
T Consensus        97 ~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~~~~---  172 (314)
T d1pjxa_          97 VQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ---  172 (314)
T ss_dssp             EETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES---
T ss_pred             EeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEeeCCcc---
Confidence            8877554332111111    13577899999987776432               1233333322 22221111111   


Q ss_pred             eEeeeCCCcccccCccceeEEEEecCCC-----EEEEEeCCceEEEEEcCCCCCcc---ceEEEeC-CCCCeeEEEEccC
Q psy8152         173 LVYSVKPDEFDLRRPVWVNGISFLPNSD-----KVAVCSKQGYVRVYDPKITTQRR---PVLKVDI-PDVALSCITTTNQ  243 (444)
Q Consensus       173 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~-~~~~i~~~~~~~~  243 (444)
                                      ..+.++|+|++.     ++++-+..+.|..|++.......   ....+.. .......|++.++
T Consensus       173 ----------------~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~  236 (314)
T d1pjxa_         173 ----------------FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED  236 (314)
T ss_dssp             ----------------SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT
T ss_pred             ----------------eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecC
Confidence                            256899998764     45555778899999987111111   1111222 1223568999999


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCC
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHS  306 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~  306 (444)
                      |++.++....+.|.+|+... +..+..+..+....++++|.|+++ ++++.+..+.|..+++..
T Consensus       237 GnlyVa~~~~g~I~~~dp~~-g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         237 NNLLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CCEEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CcEEEEEcCCCEEEEEeCCC-CEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            99888887889999999887 777777776667789999999987 455666778888877653

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.27  E-value=2.8e-09  Score=92.60  Aligned_cols=239  Identities=7%  Similarity=-0.057  Sum_probs=154.4

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc-
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW-  121 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-  121 (444)
                      ..+..+++. ++++++++...+++|+.|+.. ++...... ........+++++|+++++...++.+.+|+........ 
T Consensus        28 ~~~e~iAv~-pdG~l~vt~~~~~~I~~i~p~-g~~~~~~~-~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          28 TFLENLASA-PDGTIFVTNHEVGEIVSITPD-GNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCcCCEEEC-CCCCEEEEeCCCCEEEEEeCC-CCEEEEEc-CCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            467899999 799999998889999998865 43333222 22233445668899999988888888888876543221 


Q ss_pred             c--ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152         122 T--NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS  199 (444)
Q Consensus       122 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  199 (444)
                      .  ..........+++.++++++++.+..+.+..++...+............       +.. ..........+.+.. +
T Consensus       105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~ngi~~~~-~  175 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA-------RSN-SESVFPAANGLKRFG-N  175 (302)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS-------CSS-TTCCSCSEEEEEEET-T
T ss_pred             eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccc-------eee-ccCcccccccccccC-C
Confidence            1  1224556889999999999998888899999988876533222211110       000 000111356666654 3


Q ss_pred             CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--eeEeccccCc
Q psy8152         200 DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--CYKYKGFAGC  277 (444)
Q Consensus       200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~h~~~  277 (444)
                      .++++.+..+.|+.+++...........+. .......+++.++|+++++...++.|..++...  +.  +......-..
T Consensus       176 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G--~~~~~~~~~~~~~~  252 (302)
T d2p4oa1         176 FLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR--STTIIAQAEQGVIG  252 (302)
T ss_dssp             EEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC--CEEEEECGGGTCTT
T ss_pred             ceeeecCCCCeEEecccccccccccccccc-CCCCCcceEECCCCCEEEEEcCCCcEEEECCCC--CEEEEEecCCCCCC
Confidence            556677788899999987211111222222 233467899999999888888889999987653  33  2333333456


Q ss_pred             eeEEEe---cCCCCEEEEEECC
Q psy8152         278 VKDIAC---PLNENLILSVSLD  296 (444)
Q Consensus       278 i~~~~~---s~~~~~l~s~~~d  296 (444)
                      .++++|   +++++.|+.++..
T Consensus       253 pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         253 STAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             EEEEEECCSTTTTTEEEEEECT
T ss_pred             ceEEEEcCCCCCCCEEEEECCC
Confidence            789999   6778877766544

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.24  E-value=2.6e-08  Score=84.67  Aligned_cols=236  Identities=10%  Similarity=-0.001  Sum_probs=138.7

Q ss_pred             cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEE
Q psy8152          17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGV   93 (444)
Q Consensus        17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~   93 (444)
                      .|+|.|......     ..+.  .+...+...+|| |+|+.||.....   ..+.+.+..++....... .........+
T Consensus        20 ~l~i~d~dG~~~-----~~l~--~~~~~~~sP~wS-PDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   90 (269)
T d2hqsa1          20 ELRVSDYDGYNQ-----FVVH--RSPQPLMSPAWS-PDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPAF   90 (269)
T ss_dssp             EEEEEETTSCSC-----EEEE--EESSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEEE
T ss_pred             EEEEEcCCCCCc-----EEEe--cCCCceeeeEEC-CCCCEEEEEEeeccCcceeeeecccCceeEEee-eeccccccee
Confidence            577777665442     2222  456778899999 899999976553   346666766655443332 2223445667


Q ss_pred             EeCCCeEEEEec-CCcEEEEE--cCCCCccccccccCCCeEEEEEeccCCEEEE-eeCCC--eEEEEEcCCceeeeeeec
Q psy8152          94 SRYDECILTAVK-SGDVKLWR--YKTEPDQWTNFNVGPQLECMKHNKHSNIIAT-GGKEN--DLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        94 s~~~~~l~~~~~-dg~i~iw~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~--~i~vwd~~~~~~~~~~~~  167 (444)
                      +|+++.++.... .+...++.  ....... .............+++.+..++. ...++  .|.+.++..+....... 
T Consensus        91 spdg~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~-  168 (269)
T d2hqsa1          91 SPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW-  168 (269)
T ss_dssp             CTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC-
T ss_pred             cCCCCeeeEeeecCCccceeecccccccce-eeeeccccccccccccccccceecccccCCceEeeeecccccceeeec-
Confidence            899998776554 33333333  2222222 23334444555667775554444 44444  45555555543322221 


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCE
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHY  246 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  246 (444)
                      ...                  ......|+|+++.++..+. .+...+|... .....  ..+..+........|+|+|+.
T Consensus       169 ~~~------------------~~~~~~~spdg~~~~~~~~~~~~~~i~~~~-~~~~~--~~~~~~~~~~~~p~~SPDG~~  227 (269)
T d2hqsa1         169 EGS------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQD-LATGG--VQVLSSTFLDETPSLAPNGTM  227 (269)
T ss_dssp             SSS------------------EEEEEEECTTSSEEEEEEECSSCEEEEEEE-TTTCC--EEECCCSSSCEEEEECTTSSE
T ss_pred             ccc------------------cccccccccccceeEEEeecCCceeeeEee-ccccc--ceEeecCccccceEECCCCCE
Confidence            122                  3677889999987776544 4444444444 11222  233445556778899999999


Q ss_pred             EEEEcC---CCcEEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152         247 VIVGST---TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN  286 (444)
Q Consensus       247 l~~~~~---dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~  286 (444)
                      |+..+.   ...|+++++.. + ....+....+.+...+|||-
T Consensus       228 i~f~s~~~~~~~l~~~~~dg-~-~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         228 VIYSSSQGMGSVLNLVSTDG-R-FKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             EEEEEEETTEEEEEEEETTS-C-CEEECCCSSSEEEEEEECCC
T ss_pred             EEEEEcCCCCcEEEEEECCC-C-CEEEEeCCCCcEEeEEeCCC
Confidence            875443   34688999875 4 44566666777888999983

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.22  E-value=1.9e-09  Score=91.48  Aligned_cols=213  Identities=8%  Similarity=-0.041  Sum_probs=135.5

Q ss_pred             EEEEEeCCCeEEEEe-cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152          90 IVGVSRYDECILTAV-KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV  168 (444)
Q Consensus        90 v~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~  168 (444)
                      -.++.++|+++++.. ..+.|..++............-......+++.++++++++....+.+++++-.....+......
T Consensus        18 ~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~~~   97 (260)
T d1rwia_          18 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL   97 (260)
T ss_dssp             EEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSC
T ss_pred             EEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeeeee
Confidence            356677888766544 4566777765544333222222334678899999988887777777776665555444333322


Q ss_pred             cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEE
Q psy8152         169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI  248 (444)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  248 (444)
                      .                   .+.++++.++++++++-.....+..++..   .................++++|++++++
T Consensus        98 ~-------------------~p~~iavd~~g~i~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~i~~~~~g~~~v  155 (260)
T d1rwia_          98 N-------------------YPEGLAVDTQGAVYVADRGNNRVVKLAAG---SKTQTVLPFTGLNDPDGVAVDNSGNVYV  155 (260)
T ss_dssp             C-------------------SEEEEEECTTCCEEEEEGGGTEEEEECTT---CSSCEECCCCSCCSCCEEEECTTCCEEE
T ss_pred             e-------------------ecccccccccceeEeeccccccccccccc---cceeeeeeecccCCcceeeecCCCCEee
Confidence            2                   37899999999888877777778888776   2222111112233457899999999888


Q ss_pred             EEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee--cCCceeEEEEcC
Q psy8152         249 VGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY--MQSRLTSILVRS  326 (444)
Q Consensus       249 ~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~~~~i~~~~~~~  326 (444)
                      +....+.|..++... ................|++.++|+++++....+.|..++...... ..+.  .-.....+++..
T Consensus       156 ~~~~~~~i~~~d~~~-~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~~~~~~P~~i~~d~  233 (260)
T d1rwia_         156 TDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDS  233 (260)
T ss_dssp             EEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCCCSCCCEEEEEECT
T ss_pred             ecccccccccccccc-ceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEccCCCCCeEEEEEeC
Confidence            888888999999775 333222223445568999999999888887788888887655432 2221  223456677653

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.13  E-value=3.3e-08  Score=88.14  Aligned_cols=288  Identities=9%  Similarity=0.016  Sum_probs=156.7

Q ss_pred             EEEEEEc--CCeEEEEeC--CCCccc--cceeeccc-cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc--cccC
Q psy8152          57 ELLIAYS--GQKIKIYDT--DFKNFN--TNTDVSFG-EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN--FNVG  127 (444)
Q Consensus        57 ~l~~~~~--d~~i~vw~~--~~~~~~--~~~~~~~~-~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~  127 (444)
                      .|++|+.  .+.|+++.+  +++++.  ........ ...-+++++++++|+++.. +.+..|.+.....+...  ....
T Consensus         4 ~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~   82 (365)
T d1jofa_           4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIG   82 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCC
Confidence            3556653  456665544  334332  12222222 2234778999999887754 56788876643222111  1223


Q ss_pred             CCeEEEEEeccCCEE--EEee-CCCeEEEEEcCC-cee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         128 PQLECMKHNKHSNII--ATGG-KENDLKLWDLNT-TKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       128 ~~v~~~~~~~~~~~l--~~~~-~d~~i~vwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                      .....++++++++.+  +++. ..+.|..+.+.. +..  +..+... .........+   .......+.++.|+|+|++
T Consensus        83 ~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~q~~~h~h~v~~sPdG~~  158 (365)
T d1jofa_          83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET-GKLEKNVQNY---EYQENTGIHGMVFDPTETY  158 (365)
T ss_dssp             SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT-CCEEEEEEEE---ECCTTCCEEEEEECTTSSE
T ss_pred             CCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeec-ceecCcccCc---ccCCCCcceEEEECCCCCE
Confidence            445677788877743  3332 245666655433 111  1111100 0000000000   0001123789999999998


Q ss_pred             EEEEeC-CceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEec-----
Q psy8152         202 VAVCSK-QGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYK-----  272 (444)
Q Consensus       202 l~~~~~-d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~-----  272 (444)
                      ++++.. ...|.+|+............+.  ........++|+|+++++++ ...++.|.+|++.. .+......     
T Consensus       159 l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~-~~~~~~~~~~~~~  237 (365)
T d1jofa_         159 LYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP-ATHMPVYTHHSFP  237 (365)
T ss_dssp             EEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TTCCEEEEEEEEE
T ss_pred             EEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC-CCceEEEEeeeec
Confidence            877754 4588999876222222222222  23456789999999998865 55678999999876 43221111     


Q ss_pred             --------------cccCceeEEEecCCCCEEEEEEC------CCcEEEEEcCCCceEEEe---e----cCCceeEEEEc
Q psy8152         273 --------------GFAGCVKDIACPLNENLILSVSL------DRHFRVHDFHSKKLLRKD---Y----MQSRLTSILVR  325 (444)
Q Consensus       273 --------------~h~~~i~~~~~s~~~~~l~s~~~------dg~i~vw~~~~~~~~~~~---~----~~~~i~~~~~~  325 (444)
                                    .+......+.++|+|++|+++..      .+.|..|++.....+...   .    ......+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~  317 (365)
T d1jofa_         238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPC  317 (365)
T ss_dssp             SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEEC
T ss_pred             cccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEec
Confidence                          11123457899999999887642      223777877653222211   1    23345667766


Q ss_pred             CCCcccccchhhh-hccccccCCCccccCCCccc
Q psy8152         326 SDFSLENETKKEE-QEHSEEKGDSDEKYDPEHFE  358 (444)
Q Consensus       326 ~~~~~~~~~~~~~-~~~s~~~d~~i~~W~~~~~~  358 (444)
                      +.        +++ ++++...++.|.+|++....
T Consensus       318 p~--------~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         318 PW--------SDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             TT--------CTTEEEEECSSSCEEEEEEEETTE
T ss_pred             CC--------CCCEEEEEeCCCCeEEEEEEeCCc
Confidence            42        235 44556788999999876543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.10  E-value=5.4e-08  Score=83.24  Aligned_cols=231  Identities=8%  Similarity=0.062  Sum_probs=152.8

Q ss_pred             EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc------cCCCeEEEEEecc-CCEEEE-eeCCCeEEEEEcCCceee
Q psy8152          91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN------VGPQLECMKHNKH-SNIIAT-GGKENDLKLWDLNTTKNI  162 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~l~~-~~~d~~i~vwd~~~~~~~  162 (444)
                      .+++++++++++-..++.|++|+.. ++.+..+..      .......+++.++ +..+++ .+..+.|.+++.. +...
T Consensus        28 vavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-g~~~  105 (279)
T d1q7fa_          28 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFV  105 (279)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEE
T ss_pred             EEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc-ccce
Confidence            4556777777776677788888855 443321211      1123445666553 333333 3445577777653 4444


Q ss_pred             eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEE
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITT  240 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~  240 (444)
                      ..+....                 ......+++.+++.++++....+.+.+++..    ...+.++.  .+......+++
T Consensus       106 ~~~~~~~-----------------~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~----g~~~~~~g~~~~~~~~~~i~~  164 (279)
T d1q7fa_         106 RKFGATI-----------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN----GNVLHKFGCSKHLEFPNGVVV  164 (279)
T ss_dssp             EEECTTT-----------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECTTTCSSEEEEEE
T ss_pred             eecCCCc-----------------ccccceeccccCCcEEEEeeccceeeEeccC----Cceeecccccccccccceeee
Confidence            4432211                 1146789999999988888888889888866    44455543  34556788999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEEEC-CCcEEEEEcCCCceEEEeec--
Q psy8152         241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSVSL-DRHFRVHDFHSKKLLRKDYM--  315 (444)
Q Consensus       241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~--  315 (444)
                      .++++++++....+.|++|+..  ++.+.++.  +.......|++.++|+++++-.. ++.|.+|+. +|+++..+..  
T Consensus       165 d~~g~i~v~d~~~~~V~~~d~~--G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~  241 (279)
T d1q7fa_         165 NDKQEIFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV  241 (279)
T ss_dssp             CSSSEEEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS
T ss_pred             ccceeEEeeeccccceeeeecC--CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCC
Confidence            9999999999999999999965  67777774  34456789999999997777544 457999984 5777766642  


Q ss_pred             -CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152         316 -QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF  357 (444)
Q Consensus       316 -~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~  357 (444)
                       ......+++.+         ++.+++ ++.++.|++|...+.
T Consensus       242 ~~~~p~~vav~~---------dG~l~V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         242 KHAQCFDVALMD---------DGSVVL-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             CCSCEEEEEEET---------TTEEEE-EETTTEEEEEECSCC
T ss_pred             CCCCEeEEEEeC---------CCcEEE-EeCCCeEEEEEeeee
Confidence             23466777654         455555 456889999987654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.10  E-value=1.3e-07  Score=82.32  Aligned_cols=231  Identities=9%  Similarity=0.006  Sum_probs=142.9

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC----CcEEEEEcCCC
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS----GDVKLWRYKTE  117 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d----g~i~iw~~~~~  117 (444)
                      ...+..++|. +++++.++-...+.|+.|+..++.....+........-+++.++|+++++...+    +.|...+....
T Consensus        39 ~~~lEG~~~D-~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          39 GLQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CCCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             CcCcEeCEEC-CCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            3445789999 788877777778999999987766554443222223345567888877765432    33444454444


Q ss_pred             Cccccccc---cCCCeEEEEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152         118 PDQWTNFN---VGPQLECMKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       118 ~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      .... ...   -......+++.++|++.++...      .+.+..++...+..........                   
T Consensus       118 ~~~~-~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~-------------------  177 (319)
T d2dg1a1         118 NLQD-IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS-------------------  177 (319)
T ss_dssp             SCEE-EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES-------------------
T ss_pred             eeee-eccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccc-------------------
Confidence            4332 222   2345778999999987666432      1234444433222111111111                   


Q ss_pred             ceeEEEEecCCCEE-EEEeCCceEEEEEcCCCCCc-cceE----EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         189 WVNGISFLPNSDKV-AVCSKQGYVRVYDPKITTQR-RPVL----KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       189 ~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~-~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                      ..+.|+|+|+++.| ++-+..+.|+.|++...... ....    ...........|++.++|++.++....+.|.+|+. 
T Consensus       178 ~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-  256 (319)
T d2dg1a1         178 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-  256 (319)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-
T ss_pred             eeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-
Confidence            36789999999755 55567889999998721111 1111    11112223568999999998888888999999995 


Q ss_pred             CCCcceeEec------cccCceeEEEecCCCCEEEEEEC
Q psy8152         263 GKGKPCYKYK------GFAGCVKDIACPLNENLILSVSL  295 (444)
Q Consensus       263 ~~~~~~~~~~------~h~~~i~~~~~s~~~~~l~s~~~  295 (444)
                      . ++.+..+.      ++...+++++|.+....+++...
T Consensus       257 ~-G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         257 R-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             T-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             C-CcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            5 88887775      23446789999988776665543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.07  E-value=2.4e-07  Score=80.41  Aligned_cols=234  Identities=11%  Similarity=0.069  Sum_probs=137.5

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee-ccc---cccE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV-SFG---EGDI   90 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~-~~~---~~~v   90 (444)
                      +|.|..|+..++..  ..+.........+....++|. ++++.|+++...+.|..++............ .+.   ...-
T Consensus        45 ~g~I~r~d~~~~~~--~~~~~~~~~~~~g~P~Gl~~~-~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pnd  121 (314)
T d1pjxa_          45 AGEILRIDLKTGKK--TVICKPEVNGYGGIPAGCQCD-RDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCND  121 (314)
T ss_dssp             CCEEEEECTTTCCE--EEEECCEETTEECCEEEEEEC-SSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCE
T ss_pred             CCEEEEEECCCCcE--EEEECCccccCCCcceeEEEe-CCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcE
Confidence            35677777666652  111111100122345789999 7888888888778888888765433221111 111   1122


Q ss_pred             EEEEeCCCeEEEEec---------------CCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-----EEEEeeCCCe
Q psy8152          91 VGVSRYDECILTAVK---------------SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-----IIATGGKEND  150 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~  150 (444)
                      ..+.++|++.++-..               .|.|..++.. ++.. .....-...+.++|+|++.     ++++-+..+.
T Consensus       122 l~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~-~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~  199 (314)
T d1pjxa_         122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK  199 (314)
T ss_dssp             EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred             EEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-Ccee-EeeCCcceeeeeEECCCCCcceeEEEEEeecccc
Confidence            456678877776422               1233333322 3322 2333333457889998654     4455567788


Q ss_pred             EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152         151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI  230 (444)
Q Consensus       151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  230 (444)
                      |..|++.....+...+..      ..+..     ......-.|++.++|+++++....+.|.+|+..   ....+..+..
T Consensus       200 i~~~d~~~~g~~~~~~~~------~~~~~-----~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~---~g~~~~~i~~  265 (314)
T d1pjxa_         200 LWSYDIKGPAKIENKKVW------GHIPG-----THEGGADGMDFDEDNNLLVANWGSSHIEVFGPD---GGQPKMRIRC  265 (314)
T ss_dssp             EEEEEEEETTEEEEEEEE------EECCC-----CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT---CBSCSEEEEC
T ss_pred             eEEeeccCccccceeeEE------EEccc-----cccccceeeEEecCCcEEEEEcCCCEEEEEeCC---CCEEEEEEEC
Confidence            988887643222111000      00000     001125678999999988888888999999987   5555666666


Q ss_pred             CCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCCCCcc
Q psy8152         231 PDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRGKGKP  267 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~  267 (444)
                      .....++++|.|+++ ++++.+..|.|..+++..++..
T Consensus       266 p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G~~  303 (314)
T d1pjxa_         266 PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGKK  303 (314)
T ss_dssp             SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCBCC
T ss_pred             CCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCChh
Confidence            666789999999987 4566677888988887764543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.03  E-value=1.9e-07  Score=81.30  Aligned_cols=215  Identities=11%  Similarity=0.033  Sum_probs=136.8

Q ss_pred             EEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC----CCeEEEEEcCCceeeeeeec
Q psy8152          92 GVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK----ENDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        92 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~~~~~~~~  167 (444)
                      ++.++|+++++-...+.|+.|+..++...............+++.++|+++++...    .+.|...+............
T Consensus        46 ~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~  125 (319)
T d2dg1a1          46 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED  125 (319)
T ss_dssp             EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS
T ss_pred             EECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccC
Confidence            44567777777677888888888776655444455667889999999988776543    23344445444333222211


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT  241 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~  241 (444)
                      ...                ...++.+++.|+|++.++...      .+.+..++..    ...+..+...-...+.|+|+
T Consensus       126 ~~~----------------~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d----g~~~~~~~~~~~~pnGia~s  185 (319)
T d2dg1a1         126 LST----------------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD----FRTVTPIIQNISVANGIALS  185 (319)
T ss_dssp             SSS----------------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT----SCCEEEEEEEESSEEEEEEC
T ss_pred             CCc----------------ccCCcceeEEeccceeecccccccccCcceeEEEecc----cceeEEEeeccceeeeeeec
Confidence            111                124778999999987766432      2335555544    22333222222335789999


Q ss_pred             cCCCEE-EEEcCCCcEEEEEcCCCCcceeEec-------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe
Q psy8152         242 NQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYK-------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD  313 (444)
Q Consensus       242 ~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~  313 (444)
                      |+++.| ++-+..+.|+.|++...+.......       ........+++.++|++.++....+.|.+|+. .|+++.++
T Consensus       186 ~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i  264 (319)
T d2dg1a1         186 TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI  264 (319)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred             cccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEE
Confidence            999866 4556788999999875233322211       11223567999999998888888999999995 68888887


Q ss_pred             ecCC-------ceeEEEEcCC
Q psy8152         314 YMQS-------RLTSILVRSD  327 (444)
Q Consensus       314 ~~~~-------~i~~~~~~~~  327 (444)
                      ..+.       .+++++|.+.
T Consensus       265 ~~P~~~~~~~~~~~~~~~~~~  285 (319)
T d2dg1a1         265 LIPGRDEGHMLRSTHPQFIPG  285 (319)
T ss_dssp             ECTTGGGTCSCBCCEEEECTT
T ss_pred             eCCCcCCCcCceeeeEEEeCC
Confidence            6432       4678887654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.02  E-value=8.9e-08  Score=82.87  Aligned_cols=213  Identities=10%  Similarity=0.089  Sum_probs=140.8

Q ss_pred             EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee-eeeeeccc
Q psy8152          91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN-IFSAKNVS  169 (444)
Q Consensus        91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~  169 (444)
                      .+++|+|+++++...+++|..|+... ... .+......+.+++|.++++++++...++.+..|+...... ...+....
T Consensus        33 iAv~pdG~l~vt~~~~~~I~~i~p~g-~~~-~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (302)
T d2p4oa1          33 LASAPDGTIFVTNHEVGEIVSITPDG-NQQ-IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP  110 (302)
T ss_dssp             EEECTTSCEEEEETTTTEEEEECTTC-CEE-EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred             EEECCCCCEEEEeCCCCEEEEEeCCC-CEE-EEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccC
Confidence            46789999999988899888888553 332 3566778899999999999999988888888887654221 11111111


Q ss_pred             ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe----------CCCCCeeEEE
Q psy8152         170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD----------IPDVALSCIT  239 (444)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~~~~i~~~~  239 (444)
                      .                ....+.+++.++++++++.+..+.+..++..   .........          ........+.
T Consensus       111 ~----------------~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ngi~  171 (302)
T d2p4oa1         111 D----------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVV---QPSGSIWLEHPMLARSNSESVFPAANGLK  171 (302)
T ss_dssp             T----------------CSCEEEEEESSSSEEEEEETTTTEEEEEETT---TTEEEEEEECGGGSCSSTTCCSCSEEEEE
T ss_pred             C----------------ccccceeEEccCCCEEeeccccccceeeecc---CCcceeEecCCccceeeccCccccccccc
Confidence            1                1247899999999998888888999888887   222111111          1122345666


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce-EEEee-c
Q psy8152         240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL-LRKDY-M  315 (444)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~-~~~~~-~  315 (444)
                      +.. +.++++.+..+.|+.+++.. ........  ........++|.++|+++++...++.|..++...... +.... .
T Consensus       172 ~~~-~~l~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~  249 (302)
T d2p4oa1         172 RFG-NFLYVSNTEKMLLLRIPVDS-TDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQG  249 (302)
T ss_dssp             EET-TEEEEEETTTTEEEEEEBCT-TSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGT
T ss_pred             ccC-CceeeecCCCCeEEeccccc-cccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCC
Confidence            653 34566677888898888776 33222111  1234457899999999888888889999997754322 12222 2


Q ss_pred             CCceeEEEEcC
Q psy8152         316 QSRLTSILVRS  326 (444)
Q Consensus       316 ~~~i~~~~~~~  326 (444)
                      ....++++|..
T Consensus       250 ~~~pt~vafg~  260 (302)
T d2p4oa1         250 VIGSTAVAFGQ  260 (302)
T ss_dssp             CTTEEEEEECC
T ss_pred             CCCceEEEEcC
Confidence            34578888853

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=6.3e-08  Score=89.04  Aligned_cols=313  Identities=7%  Similarity=-0.004  Sum_probs=163.1

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE---------cCCeEEEEeCCCCcccc
Q psy8152           9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY---------SGQKIKIYDTDFKNFNT   79 (444)
Q Consensus         9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~---------~d~~i~vw~~~~~~~~~   79 (444)
                      ++.-..+|.|.+|++.+++.  ..+-.... -..-.+....|| |++++|+.+.         ..+.+.+||+.++....
T Consensus        30 ~~~~~~~g~i~~~~~~~~~~--~~l~~~~~-~~~~~~~~~~~S-pD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~  105 (465)
T d1xfda1          30 FIYREQKGTVRLWNVETNTS--TVLIEGKK-IESLRAIRYEIS-PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS  105 (465)
T ss_dssp             BCCCCSSSCEEEBCGGGCCC--EEEECTTT-TTTTTCSEEEEC-TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE
T ss_pred             EEEEeCCCcEEEEECCCCCE--EEEEcCcc-ccccccceeEEC-CCCCeEEEEEcccceeEeeccccEEEEEccCCceee
Confidence            33445678999999988763  11111111 123466778899 7999988764         35788999999887654


Q ss_pred             ceeecccccc--EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc-cCCC-----------------eEEEEEeccC
Q psy8152          80 NTDVSFGEGD--IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN-VGPQ-----------------LECMKHNKHS  139 (444)
Q Consensus        80 ~~~~~~~~~~--v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~-----------------v~~~~~~~~~  139 (444)
                      ..........  ...+||+|+.||... ++.|.+.+..++..++.... ....                 -..+.|+|+|
T Consensus       106 l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDg  184 (465)
T d1xfda1         106 LDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG  184 (465)
T ss_dssp             CCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS
T ss_pred             ccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCC
Confidence            4322122222  356799999988764 56888888776655542221 1111                 2467899999


Q ss_pred             CEEEEeeC-CCeEEEEEcCC--ce---eeeeee--cccc-----eeeEeeeCCC---------cccccCccceeEEEEec
Q psy8152         140 NIIATGGK-ENDLKLWDLNT--TK---NIFSAK--NVSH-----RVLVYSVKPD---------EFDLRRPVWVNGISFLP  197 (444)
Q Consensus       140 ~~l~~~~~-d~~i~vwd~~~--~~---~~~~~~--~~~~-----~~~~~~~~~~---------~~~~~~~~~i~~~~~~~  197 (444)
                      +.||.... +..|..+.+..  +.   .+..++  ....     .+.++.+...         .........+..+.|+|
T Consensus       185 k~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~  264 (465)
T d1xfda1         185 TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT  264 (465)
T ss_dssp             SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS
T ss_pred             CeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcC
Confidence            99998763 34454444321  00   111111  0000     1112222111         11111122377889999


Q ss_pred             CCCEEEEEe-CC---ceEEEEEcCCCCCccceEEEeCCCCCe----eEEEEccCCCEEE---EEcCC--CcEEEEEcCC-
Q psy8152         198 NSDKVAVCS-KQ---GYVRVYDPKITTQRRPVLKVDIPDVAL----SCITTTNQSHYVI---VGSTT--GDMMAVDLRG-  263 (444)
Q Consensus       198 ~~~~l~~~~-~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~---~~~~d--g~i~iwd~~~-  263 (444)
                      ++++++... .+   ..|.++|.. ++....+..-. ....|    ....|+|+|+.++   ..-.+  +.++.+.+.. 
T Consensus       265 d~~~~~~~~nR~q~~~~i~~~d~~-tg~~~~~~~e~-~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~  342 (465)
T d1xfda1         265 STKVAVTWLNRAQNVSILTLCDAT-TGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSS  342 (465)
T ss_dssp             SSEEEEEEEETTSCEEEEEEEETT-TCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECS
T ss_pred             CCeEEEEEEccccccceEEEEcCC-CCcEEEEEEEc-CCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccc
Confidence            987655432 22   367788887 33333333222 22222    3467899987432   22233  2444444321 


Q ss_pred             ----CCcceeEeccccCceeEE-EecCCCCEEE-EEECCC--cEEEEEc--CCCceEEEe----ecCCceeEEEEcCCC
Q psy8152         264 ----KGKPCYKYKGFAGCVKDI-ACPLNENLIL-SVSLDR--HFRVHDF--HSKKLLRKD----YMQSRLTSILVRSDF  328 (444)
Q Consensus       264 ----~~~~~~~~~~h~~~i~~~-~~s~~~~~l~-s~~~dg--~i~vw~~--~~~~~~~~~----~~~~~i~~~~~~~~~  328 (444)
                          .++.+..+....-.|+.+ +|+++++.|+ ++..++  .-++|.+  ..+.....+    ........+.|+++.
T Consensus       343 ~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~  421 (465)
T d1xfda1         343 QPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSM  421 (465)
T ss_dssp             SCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTS
T ss_pred             cccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCC
Confidence                133444454334456665 6888877554 443332  2344444  332222111    123345677777553

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.92  E-value=1.6e-06  Score=74.24  Aligned_cols=222  Identities=9%  Similarity=-0.013  Sum_probs=142.2

Q ss_pred             EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      -+..|.+.++.++.+--..+.|..|+..+++.. .+... ......++..++.++++ +.+ .|.++|..+++... +..
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~~~-~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~-l~~   95 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALP-FMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTL-HAE   95 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECS-SCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEE-EEC
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEECC-CCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeE-Eee
Confidence            345688434555555556789999999877653 33322 22233344566766654 454 58899999887553 221


Q ss_pred             -----cCCCeEEEEEeccCCEEEEeeC----CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152         126 -----VGPQLECMKHNKHSNIIATGGK----ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL  196 (444)
Q Consensus       126 -----~~~~v~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  196 (444)
                           ....++.+.+.|+|++.++...    .+.-.+|.+..++.........                   ..+.++|+
T Consensus        96 ~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~-------------------~~Ng~~~s  156 (295)
T d2ghsa1          96 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADIS-------------------IPNSICFS  156 (295)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEES-------------------SEEEEEEC
T ss_pred             eecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccC-------------------Ccceeeec
Confidence                 1235788899999987776543    2344566665555443333222                   26789999


Q ss_pred             cCCCEE-EEEeCCceEEEEEcCCCC-----CccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152         197 PNSDKV-AVCSKQGYVRVYDPKITT-----QRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK  270 (444)
Q Consensus       197 ~~~~~l-~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  270 (444)
                      ++++.+ ++-+..+.|..|++....     .......+.........+++..+|++.++....+.|..||. . ++.+..
T Consensus       157 ~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~-G~~~~~  234 (295)
T d2ghsa1         157 PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D-GNHIAR  234 (295)
T ss_dssp             TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T-CCEEEE
T ss_pred             CCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-C-CcEeeE
Confidence            999755 555678899999876111     11111222334456788999999998888777888999995 4 788888


Q ss_pred             eccccCceeEEEec-CCCCEEEEE
Q psy8152         271 YKGFAGCVKDIACP-LNENLILSV  293 (444)
Q Consensus       271 ~~~h~~~i~~~~~s-~~~~~l~s~  293 (444)
                      +.-....+++++|- |+.+.|+..
T Consensus       235 i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         235 YEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             EECSCSBEEEEEEESTTSCEEEEE
T ss_pred             ecCCCCceEEEEEeCCCCCEEEEE
Confidence            87656678999995 566555433

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=3.4e-06  Score=77.21  Aligned_cols=277  Identities=11%  Similarity=0.033  Sum_probs=153.8

Q ss_pred             cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecccc-----
Q psy8152          13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE-----   87 (444)
Q Consensus        13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-----   87 (444)
                      +..+.+.++++.++..  ..+....  .....+....|| |+++.||-.. ++.|.+.+..++...+... .+..     
T Consensus        88 s~~~~~~i~d~~~~~~--~~l~~~~--~~~~~l~~~~wS-PDG~~iafv~-~~nl~~~~~~~~~~~~lt~-~g~~~~i~n  160 (465)
T d1xfda1          88 SYTGYYVLSKIPHGDP--QSLDPPE--VSNAKLQYAGWG-PKGQQLIFIF-ENNIYYCAHVGKQAIRVVS-TGKEGVIYN  160 (465)
T ss_dssp             CCCSEEEEEESSSCCC--EECCCTT--CCSCCCSBCCBC-SSTTCEEEEE-TTEEEEESSSSSCCEEEEC-CCBTTTEEE
T ss_pred             eccccEEEEEccCCce--eeccCcc--CCccccceeeec-cCCceEEEEe-cceEEEEecCCCceEEEec-ccCcceeec
Confidence            3457888999988873  2222111  334566778899 7999998876 4788888887665544322 1111     


Q ss_pred             --------------ccEEEEEeCCCeEEEEecC-Cc---------------------------------EEEEEcCCCCc
Q psy8152          88 --------------GDIVGVSRYDECILTAVKS-GD---------------------------------VKLWRYKTEPD  119 (444)
Q Consensus        88 --------------~~v~~~s~~~~~l~~~~~d-g~---------------------------------i~iw~~~~~~~  119 (444)
                                    ....-+||+|++||....| ..                                 +.++++.++..
T Consensus       161 G~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~  240 (465)
T d1xfda1         161 GLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH  240 (465)
T ss_dssp             EECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC
T ss_pred             cccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcE
Confidence                          1234479999998886532 22                                 34445443332


Q ss_pred             ccccc------ccCCCeEEEEEeccCCEEEEeeC----CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152         120 QWTNF------NVGPQLECMKHNKHSNIIATGGK----ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW  189 (444)
Q Consensus       120 ~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (444)
                      .....      ....-+..+.|+|++++++....    ...|.++|..++++...+.....                 .|
T Consensus       241 ~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~-----------------~w  303 (465)
T d1xfda1         241 DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-----------------AW  303 (465)
T ss_dssp             CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-----------------SC
T ss_pred             EEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCC-----------------ce
Confidence            21111      11223677889988876665432    23577888888776544332211                 12


Q ss_pred             e----eEEEEecCCCEEE---EEeCCc--eEEEEEcC---CCCCccceEEEeCCCCCeeEE-EEccCCCEEE-EEcCCC-
Q psy8152         190 V----NGISFLPNSDKVA---VCSKQG--YVRVYDPK---ITTQRRPVLKVDIPDVALSCI-TTTNQSHYVI-VGSTTG-  254 (444)
Q Consensus       190 i----~~~~~~~~~~~l~---~~~~d~--~i~i~d~~---~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~-~~~~dg-  254 (444)
                      |    ....|+|+|+.++   ..-.+|  .+..+.+.   .......+..+....-.|..+ .|++.++.|+ ++..++ 
T Consensus       304 v~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p  383 (465)
T d1xfda1         304 LHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLP  383 (465)
T ss_dssp             CCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCT
T ss_pred             EeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCC
Confidence            2    2357889986432   222222  33333322   011223333344445556654 6888776664 444332 


Q ss_pred             -cEEEE--EcCCCCcceeEec---cccCceeEEEecCCCCEEEEEECC---CcEEEEEcCCCceEEEee
Q psy8152         255 -DMMAV--DLRGKGKPCYKYK---GFAGCVKDIACPLNENLILSVSLD---RHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       255 -~i~iw--d~~~~~~~~~~~~---~h~~~i~~~~~s~~~~~l~s~~~d---g~i~vw~~~~~~~~~~~~  314 (444)
                       .-+||  ++.. ......+.   ........+.|||++++++..+..   -.+.+++..+++.+..+.
T Consensus       384 ~~~hly~v~l~g-~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le  451 (465)
T d1xfda1         384 RRRQLYSANTVG-NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLE  451 (465)
T ss_dssp             TCCEEEEECSST-TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEE
T ss_pred             CceEEEEEECCC-CCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEEc
Confidence             22344  4443 22222221   234456789999999988855443   457888888888877654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.72  E-value=1.1e-05  Score=68.98  Aligned_cols=207  Identities=11%  Similarity=0.020  Sum_probs=134.1

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEee
Q psy8152          97 DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYS  176 (444)
Q Consensus        97 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  176 (444)
                      +.++.+=-..+.|..|+..+++..  .......+.++++.+++.++++ +. ..|.++|..+++..........      
T Consensus        30 ~~l~wvDi~~~~I~r~d~~~g~~~--~~~~~~~~~~i~~~~dg~l~va-~~-~gl~~~d~~tg~~~~l~~~~~~------   99 (295)
T d2ghsa1          30 GTAWWFNILERELHELHLASGRKT--VHALPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAELESD------   99 (295)
T ss_dssp             TEEEEEEGGGTEEEEEETTTTEEE--EEECSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECSSTT------
T ss_pred             CEEEEEECCCCEEEEEECCCCeEE--EEECCCCcEEEEEecCCCEEEE-Ee-CccEEeecccceeeEEeeeecC------
Confidence            334444445678888888877654  3445667889999888876665 44 4588999988764432221111      


Q ss_pred             eCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEE-EEEc
Q psy8152         177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV-IVGS  251 (444)
Q Consensus       177 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~  251 (444)
                              .....++.+.+.|+|++.++...    .+.-.+|.+.   .......+. .-...+.++|+++++.+ ++-+
T Consensus       100 --------~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~---~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt  167 (295)
T d2ghsa1         100 --------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA---KGKVTKLFA-DISIPNSICFSPDGTTGYFVDT  167 (295)
T ss_dssp             --------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---TTEEEEEEE-EESSEEEEEECTTSCEEEEEET
T ss_pred             --------CCcccceeeEECCCCCEEEEeccccccccceeEeeec---CCcEEEEee-ccCCcceeeecCCCceEEEeec
Confidence                    01125788999999987765432    2344566665   333322222 22345789999998865 4566


Q ss_pred             CCCcEEEEEcCCCC-----c--ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-CceeEEE
Q psy8152         252 TTGDMMAVDLRGKG-----K--PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-SRLTSIL  323 (444)
Q Consensus       252 ~dg~i~iwd~~~~~-----~--~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-~~i~~~~  323 (444)
                      ..+.|+.|++....     +  ....+.+..+....+++..+|++.++.-..+.|..|+. .++++..+... ..+++++
T Consensus       168 ~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~  246 (295)
T d2ghsa1         168 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA  246 (295)
T ss_dssp             TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred             ccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEE
Confidence            77889999875311     1  11122234456788999999998887777889999994 68888888764 5689999


Q ss_pred             EcC
Q psy8152         324 VRS  326 (444)
Q Consensus       324 ~~~  326 (444)
                      |-.
T Consensus       247 FGG  249 (295)
T d2ghsa1         247 FIG  249 (295)
T ss_dssp             EES
T ss_pred             EeC
Confidence            863

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.67  E-value=1.1e-05  Score=70.21  Aligned_cols=227  Identities=9%  Similarity=0.003  Sum_probs=137.0

Q ss_pred             eCCCeEEEEe-cCCcEEEEEcCCCCcccc-ccccCCCeEEEEEec--cCCEEEEeeCC------------------CeEE
Q psy8152          95 RYDECILTAV-KSGDVKLWRYKTEPDQWT-NFNVGPQLECMKHNK--HSNIIATGGKE------------------NDLK  152 (444)
Q Consensus        95 ~~~~~l~~~~-~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~--~~~~l~~~~~d------------------~~i~  152 (444)
                      +||++|++.. .+..|.+.|+.+.++.+. .......+..++..+  +..+++.++..                  +.+.
T Consensus        97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            5788877765 578899999999887542 234556677777654  55677766653                  2356


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc---------------eEEEEE--
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG---------------YVRVYD--  215 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------~i~i~d--  215 (444)
                      ++|..+.+..........                   ...+.++|+|+++++.+.+.               .+.+++  
T Consensus       177 ~ID~~tm~V~~QV~V~g~-------------------ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~  237 (459)
T d1fwxa2         177 AVDADKWEVAWQVLVSGN-------------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA  237 (459)
T ss_dssp             EEETTTTEEEEEEEESSC-------------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred             EEecCCceEEEEeeeCCC-------------------hhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechH
Confidence            788888777766654433                   56788999998888766431               233333  


Q ss_pred             ---------------------cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-------Cc
Q psy8152         216 ---------------------PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-------GK  266 (444)
Q Consensus       216 ---------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-------~~  266 (444)
                                           .+.......+..+.... ....+.++|+|+++++ +..+.++.|+|++..       ..
T Consensus       238 rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpK-sPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~  316 (459)
T d1fwxa2         238 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD  316 (459)
T ss_dssp             HHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-
T ss_pred             HhHHhhhcCCcEEeCCceeecccccCCcceeEEEecCC-CCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCC
Confidence                                 33101112222232222 3467899999999877 556889999999740       11


Q ss_pred             ---ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC----------ceEEEeecCCceeEEEEcCCCccccc
Q psy8152         267 ---PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK----------KLLRKDYMQSRLTSILVRSDFSLENE  333 (444)
Q Consensus       267 ---~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~  333 (444)
                         .+..-....-.-..-+|...|.-..|.--|.+|.-|++...          ..+.++...-.+-.+...-.   +..
T Consensus       317 ~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g---~t~  393 (459)
T d1fwxa2         317 PRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMG---ETL  393 (459)
T ss_dssp             GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTT---TST
T ss_pred             ccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcC---CcC
Confidence               11111111223356689888866666668999999998532          44555554444444443321   113


Q ss_pred             chhhhhccccc
Q psy8152         334 TKKEEQEHSEE  344 (444)
Q Consensus       334 ~~~~~~~~s~~  344 (444)
                      .++++++++..
T Consensus       394 ~~dgk~l~~~n  404 (459)
T d1fwxa2         394 DATNDWLVCLS  404 (459)
T ss_dssp             TCCSSEEEEEE
T ss_pred             CCCCCEEEEec
Confidence            36677777654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.65  E-value=1.9e-05  Score=73.96  Aligned_cols=296  Identities=15%  Similarity=0.137  Sum_probs=166.2

Q ss_pred             cccEEEecC-CCcEEEEEcC-CCccceeeeeeeccc------CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc
Q psy8152           6 DYNIYIGSS-TGAFKGVNLS-KDKCIIKNIQNVKYI------TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF   77 (444)
Q Consensus         6 ~~~l~~g~~-dg~i~i~~~~-~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~   77 (444)
                      +..|++++. ++.|...+.. +++..-+ +......      .....-..+++.   +..|+.++.++.+.-.|.++|+.
T Consensus        62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~-~~~~~~~~~~~~~~~~~~~rg~a~~---~~~i~~~~~~g~l~alda~tG~~  137 (571)
T d2ad6a1          62 GDMMYVHSAFPNNTYALNLNDPGKIVWQ-HKPKQDASTKAVMCCDVVDRGLAYG---AGQIVKKQANGHLLALDAKTGKI  137 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEE-ECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCE
T ss_pred             CCEEEEecCCCCeEEEEeCCCCCceEEE-ecCCCCcccccccccCcCCCcceee---CCeEEEEeCCCcEEeeehhhhhh
Confidence            345666654 6788888864 5664211 1100000      000011234554   46788889999999999999998


Q ss_pred             ccceeeccccc--cEEE--EEeCCCeEEEEe------cCCcEEEEEcCCCCcccccccc---------------------
Q psy8152          78 NTNTDVSFGEG--DIVG--VSRYDECILTAV------KSGDVKLWRYKTEPDQWTNFNV---------------------  126 (444)
Q Consensus        78 ~~~~~~~~~~~--~v~~--~s~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~---------------------  126 (444)
                      ...+.......  .+..  +-. +..++.+.      ..|.|+-+|+.+++.++.....                     
T Consensus       138 ~w~~~~~~~~~~~~~t~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~  216 (571)
T d2ad6a1         138 NWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ  216 (571)
T ss_dssp             EEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred             hccccccccccccceeecCeEe-CCeEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCc
Confidence            77654321111  1111  112 33444444      3678999999999887632211                     


Q ss_pred             ----------------CCCe-EEEEEeccCCEEEEeeC----------------CCeEEEEEcCCceeeeeeecccceee
Q psy8152         127 ----------------GPQL-ECMKHNKHSNIIATGGK----------------ENDLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus       127 ----------------~~~v-~~~~~~~~~~~l~~~~~----------------d~~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                                      ...+ ...++.+...+++.+..                ...+.-.|+++++.+..++...+   
T Consensus       217 ~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~---  293 (571)
T d2ad6a1         217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH---  293 (571)
T ss_dssp             SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT---
T ss_pred             ccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCc---
Confidence                            1112 23456665556555443                34677889999998887776544   


Q ss_pred             EeeeCCCcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCC-------------------
Q psy8152         174 VYSVKPDEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-------------------  231 (444)
Q Consensus       174 ~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------------------  231 (444)
                            +..+...........+..++   ..++.++.+|.+.++|..   +++++...+..                   
T Consensus       294 ------D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~---tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~  364 (571)
T d2ad6a1         294 ------DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE---NGNLIVAEKVDPAVNVFKKVDLKTGTPVRD  364 (571)
T ss_dssp             ------CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT---TCCEEEEEESSTTCCSEEEECTTTCSEEEC
T ss_pred             ------cccccccccccceeeeeccCccccceeeccccceEEEEecC---CCcEeeeeccCCcccccccccccccccccC
Confidence                  11111111122222233344   356778889999999987   44444321110                   


Q ss_pred             ------------------CC--CeeEEEEccCCCEEEEEcCC-------------------------------------C
Q psy8152         232 ------------------DV--ALSCITTTNQSHYVIVGSTT-------------------------------------G  254 (444)
Q Consensus       232 ------------------~~--~i~~~~~~~~~~~l~~~~~d-------------------------------------g  254 (444)
                                        ..  .-...+++|...++++...+                                     |
T Consensus       365 ~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  444 (571)
T d2ad6a1         365 PEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMG  444 (571)
T ss_dssp             GGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCE
T ss_pred             cccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcc
Confidence                              00  00135677776666553322                                     3


Q ss_pred             cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCcee
Q psy8152         255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLT  320 (444)
Q Consensus       255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~  320 (444)
                      .|.-+|+.+ ++.+.+... ..+..+-.++-.+.++++++.||.++.+|..+|+.+.++.....+.
T Consensus       445 ~l~AiD~~T-G~~~W~~~~-~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~  508 (571)
T d2ad6a1         445 QIRAFDLTT-GKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI  508 (571)
T ss_dssp             EEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred             cEEEeccCC-CceeeEcCC-CCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCce
Confidence            566777777 777766552 1111111122245678889999999999999999999887555443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.63  E-value=1.7e-05  Score=74.19  Aligned_cols=297  Identities=12%  Similarity=0.094  Sum_probs=171.3

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc-C--c--ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-T--N--KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~--h--~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      +..|++++.++.|.-.|..+++..-+.-...... .  +  ...-..++..   +..++.+..++.|.-.|..+|+.+..
T Consensus        66 ~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~g~l~Alda~tG~~~w~  142 (560)
T d1kv9a2          66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAIWS  142 (560)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee---CCeEEEEeCCCEEEEEECCCCcEEec
Confidence            4678888889999999999887531110000000 0  0  0111122222   56788889999999999999998877


Q ss_pred             eeeccccccEE-EEEe--CCCeEEEEec------CCcEEEEEcCCCCcccccccc-------------------------
Q psy8152          81 TDVSFGEGDIV-GVSR--YDECILTAVK------SGDVKLWRYKTEPDQWTNFNV-------------------------  126 (444)
Q Consensus        81 ~~~~~~~~~v~-~~s~--~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~-------------------------  126 (444)
                      +.......... ..+|  ....++.+..      .|.|.-+|..+++.++.+..-                         
T Consensus       143 ~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (560)
T d1kv9a2         143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY  222 (560)
T ss_dssp             EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred             cCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCcccccccccccccccccc
Confidence            65432211111 0011  2333444332      367999999999888743210                         


Q ss_pred             -----CCCe-EEEEEeccCCEEEEeeC-------------------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152         127 -----GPQL-ECMKHNKHSNIIATGGK-------------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       127 -----~~~v-~~~~~~~~~~~l~~~~~-------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (444)
                           ...+ ..+++.+...+++.+..                   ...|.-.|+++++....++...+         +.
T Consensus       223 ~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~---------D~  293 (560)
T d1kv9a2         223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPG---------DS  293 (560)
T ss_dssp             HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT---------CC
T ss_pred             ccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEecccc---------cc
Confidence                 1111 22455665555554321                   24567778888888776665544         22


Q ss_pred             ccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC--------------------------
Q psy8152         182 FDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD--------------------------  232 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--------------------------  232 (444)
                      .+........-+....++   ..++.+..+|.+.++|..   +++++.......                          
T Consensus       294 wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~---tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  370 (560)
T d1kv9a2         294 WDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT---NGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEP  370 (560)
T ss_dssp             SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSC
T ss_pred             ccccccceeeeeeeecCCceeeeeeecCccceEEEEecC---CCcccccccccccccccccChhhccccccccccccccc
Confidence            222222222222333344   467788899999999987   555444322110                          


Q ss_pred             ----------CCeeEEEEccCCCEEEEEcC------------------------------------CCcEEEEEcCCCCc
Q psy8152         233 ----------VALSCITTTNQSHYVIVGST------------------------------------TGDMMAVDLRGKGK  266 (444)
Q Consensus       233 ----------~~i~~~~~~~~~~~l~~~~~------------------------------------dg~i~iwd~~~~~~  266 (444)
                                ..-...+++|+..++++...                                    .|.|.-||+.+ ++
T Consensus       371 ~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~t-Gk  449 (560)
T d1kv9a2         371 IVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QK  449 (560)
T ss_dssp             EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TE
T ss_pred             eeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCC-Ce
Confidence                      00124566777666655332                                    24577788888 88


Q ss_pred             ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152         267 PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       267 ~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i  319 (444)
                      .+.+++. ..+..+-.++-.+.+++.|+.||.++.+|..+|+.+.++.....+
T Consensus       450 ~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~  501 (560)
T d1kv9a2         450 AAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGI  501 (560)
T ss_dssp             EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred             EeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCc
Confidence            8877652 222222223334678888999999999999999999988755443

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.62  E-value=5.3e-06  Score=70.22  Aligned_cols=229  Identities=9%  Similarity=0.003  Sum_probs=122.6

Q ss_pred             eeeccC--CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec-C-----CcEEEEEcCCCCcc
Q psy8152          49 NWGNVE--ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK-S-----GDVKLWRYKTEPDQ  120 (444)
Q Consensus        49 ~~~~~~--~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~-d-----g~i~iw~~~~~~~~  120 (444)
                      ..+ |+  |++++..+. +.|.+.++.+++..+... ......-..+||||+.||.... +     ..|.+++..+++..
T Consensus         5 ~~s-Pdi~G~~v~f~~~-~dl~~~d~~~g~~~~Lt~-~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~   81 (281)
T d1k32a2           5 LLN-PDIHGDRIIFVCC-DDLWEHDLKSGSTRKIVS-NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK   81 (281)
T ss_dssp             CEE-EEEETTEEEEEET-TEEEEEETTTCCEEEEEC-SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred             ccC-CCCCCCEEEEEeC-CcEEEEECCCCCEEEEec-CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence            356 67  888887654 689999999887654322 1122333567999999886543 2     24777777777655


Q ss_pred             ccccc------cCCCeEEEEEeccCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152         121 WTNFN------VGPQLECMKHNKHSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV  188 (444)
Q Consensus       121 ~~~~~------~~~~v~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (444)
                      .....      .........|+|+++.|+.....      ..+...+...+......   ..                  
T Consensus        82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------  140 (281)
T d1k32a2          82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLN---LG------------------  140 (281)
T ss_dssp             ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECC---SC------------------
T ss_pred             EeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEec---CC------------------
Confidence            42111      12245678899999988875432      23444454443332211   11                  


Q ss_pred             ceeEEEEecCC-CEEEEEeCCc-----------eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC--C
Q psy8152         189 WVNGISFLPNS-DKVAVCSKQG-----------YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT--G  254 (444)
Q Consensus       189 ~i~~~~~~~~~-~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g  254 (444)
                      .... .+.+++ ..++......           ...++...   ... ...............++++. .+.....+  .
T Consensus       141 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  214 (281)
T d1k32a2         141 PATH-ILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVN---SGA-FKKIVDMSTHVSSPVIVGHR-IYFITDIDGFG  214 (281)
T ss_dssp             SCSE-EEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEE---TTE-EEEEECCSSCCEEEEEETTE-EEEEECTTSSC
T ss_pred             ccce-eeecCCCeEEEeeccccceeeeeccCCcceeeeecc---ccc-eeeccCCccccceeeeeccc-cceeccccccc
Confidence            1222 233444 3333322211           11112211   111 12222333344555666553 33333333  3


Q ss_pred             cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE
Q psy8152         255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR  311 (444)
Q Consensus       255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~  311 (444)
                      .|+++|+.. +. +..+..+.. .....|+|+|+.|+. ..++.|+++++.+++...
T Consensus       215 ~l~~~d~~g-~~-~~~lt~~~~-~~~~~~SpDG~~I~f-~~~~~l~~~d~~~g~~~~  267 (281)
T d1k32a2         215 QIYSTDLDG-KD-LRKHTSFTD-YYPRHLNTDGRRILF-SKGGSIYIFNPDTEKIEK  267 (281)
T ss_dssp             EEEEEETTS-CS-CEECCCCCS-SCEEEEEESSSCEEE-EETTEEEEECTTTCCEEE
T ss_pred             ceEEEeCCC-Cc-eEEeecCCC-cccccCcCCCCEEEE-EeCCEEEEEECCCCCEEE
Confidence            577788775 43 444443222 223468999988775 446889999999887643

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.53  E-value=5.3e-06  Score=70.20  Aligned_cols=238  Identities=9%  Similarity=0.027  Sum_probs=125.8

Q ss_pred             EEEeC--CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-C-----CeEEEEEcCCceeee
Q psy8152          92 GVSRY--DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-E-----NDLKLWDLNTTKNIF  163 (444)
Q Consensus        92 ~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~vwd~~~~~~~~  163 (444)
                      .++|+  |+.++..+ ++.|.+.++.+++..+ +..+...+...+|+|+|+.||.... +     ..|.+++..+++...
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~-Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRK-IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEE-EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEE-EecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            35788  99887664 4678888999888764 6667778899999999999986542 1     246777777665543


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSC  237 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~  237 (444)
                      .......            ............|+|+++.|+....      ...+...+..   ......   .+......
T Consensus        83 lt~~~~~------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~  144 (281)
T d1k32a2          83 ITYFSGK------------STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVEND---GINFVP---LNLGPATH  144 (281)
T ss_dssp             CCCCCEE------------EETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGG---GTEEEE---CCSCSCSE
T ss_pred             eeecCCC------------ccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCC---CceeEE---ecCCccce
Confidence            2111100            0000113567889999998886533      2234455544   222221   22233334


Q ss_pred             EEEccCCCEEEEEcCCC-----------cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC--CcEEEEEc
Q psy8152         238 ITTTNQSHYVIVGSTTG-----------DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD--RHFRVHDF  304 (444)
Q Consensus       238 ~~~~~~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d--g~i~vw~~  304 (444)
                      +.+.+.+.+++......           ...++.... ..... ...+........++++. ++.....+  ..|+++++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~  221 (281)
T d1k32a2         145 ILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNS-GAFKK-IVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDL  221 (281)
T ss_dssp             EEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEET-TEEEE-EECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEET
T ss_pred             eeecCCCeEEEeeccccceeeeeccCCcceeeeeccc-cceee-ccCCccccceeeeeccc-cceecccccccceEEEeC
Confidence            43443444444332221           112222222 22222 22223334445555542 22222232  35777888


Q ss_pred             CCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152         305 HSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT  363 (444)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~  363 (444)
                      .+++... +..........|+         |+++.|+- ..++.|.++++.+++..++.
T Consensus       222 ~g~~~~~-lt~~~~~~~~~~S---------pDG~~I~f-~~~~~l~~~d~~~g~~~~i~  269 (281)
T d1k32a2         222 DGKDLRK-HTSFTDYYPRHLN---------TDGRRILF-SKGGSIYIFNPDTEKIEKIE  269 (281)
T ss_dssp             TSCSCEE-CCCCCSSCEEEEE---------ESSSCEEE-EETTEEEEECTTTCCEEECC
T ss_pred             CCCceEE-eecCCCcccccCc---------CCCCEEEE-EeCCEEEEEECCCCCEEEec
Confidence            7766543 2222222222344         44555553 34577888888877766554

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.48  E-value=0.0001  Score=69.22  Aligned_cols=248  Identities=14%  Similarity=0.112  Sum_probs=146.4

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccceeeccccccE-EEEEe--CCCeEEEEec------CCcEEEEEcCCCCcccccccc
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDI-VGVSR--YDECILTAVK------SGDVKLWRYKTEPDQWTNFNV  126 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v-~~~s~--~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~  126 (444)
                      .+++.++.|+.|.-.|..+|+.+..+......... ...+|  .+..++++..      .|.|+-+|+.+++.++++...
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~  201 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence            47889999999999999999998877532211111 11111  2445555543      488999999999988743211


Q ss_pred             -------------------------------------CC-CeEEEEEeccCCEEEEeeC----------------CCeEE
Q psy8152         127 -------------------------------------GP-QLECMKHNKHSNIIATGGK----------------ENDLK  152 (444)
Q Consensus       127 -------------------------------------~~-~v~~~~~~~~~~~l~~~~~----------------d~~i~  152 (444)
                                                           .. .-..+++.+...+++.+..                ...|.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv  281 (596)
T d1w6sa_         202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (596)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence                                                 01 1123455665566655432                24577


Q ss_pred             EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE-ecCC---CEEEEEeCCceEEEEEcCCCCCccceEEE
Q psy8152         153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF-LPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKV  228 (444)
Q Consensus       153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  228 (444)
                      -.|+.+++.+..++...+         +..+......+.-+.. ..++   +.++....+|.+.++|..   +++++...
T Consensus       282 AlD~~TG~~~W~~Q~~~~---------D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~---tG~~i~~~  349 (596)
T d1w6sa_         282 GRDADTGEAKFGYQKTPH---------DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRT---DGALVSAN  349 (596)
T ss_dssp             EEETTTCCEEEEEESSTT---------CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETT---TCCEEEEE
T ss_pred             ccccccccccccccceec---------cccCCccccceeeeeccccccccccceeccccccceeeecCC---CCceeeec
Confidence            889999998887765544         2222222222222222 2233   467778889999999987   44444321


Q ss_pred             eCCC---------------------------------------CCeeEEEEccCCCEEEEEcC-----------------
Q psy8152         229 DIPD---------------------------------------VALSCITTTNQSHYVIVGST-----------------  252 (444)
Q Consensus       229 ~~~~---------------------------------------~~i~~~~~~~~~~~l~~~~~-----------------  252 (444)
                      ....                                       ..-..++++|...+++....                 
T Consensus       350 ~~~~~~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~  429 (596)
T d1w6sa_         350 KLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQ  429 (596)
T ss_dssp             ESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS
T ss_pred             cccccccccccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccc
Confidence            1000                                       00023456666555544321                 


Q ss_pred             ----------------------CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         253 ----------------------TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       253 ----------------------dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                                            -|.|.-||+.+ ++.+.+.. +..++.+-.++-.+.+++.|+.||.++.+|..+|+.+
T Consensus       430 ~~~g~~~~~~~~~~g~~~~~~~~G~l~A~D~~T-G~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~L  507 (596)
T d1w6sa_         430 FFVGATLNMYPGPKGDRQNYEGLGQIKAYNAIT-GDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL  507 (596)
T ss_dssp             CCCCEEEEEEECTTSBTTTTBCCEEEEEECTTT-CCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cccccccccccCcccCcccCCCcceEEEEeCCC-CceecccC-CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEe
Confidence                                  14577777777 77766554 1222222222335678888999999999999999999


Q ss_pred             EEeecCC
Q psy8152         311 RKDYMQS  317 (444)
Q Consensus       311 ~~~~~~~  317 (444)
                      .++....
T Consensus       508 W~~~~~~  514 (596)
T d1w6sa_         508 WKFKIPS  514 (596)
T ss_dssp             EEEECSS
T ss_pred             eEEECCC
Confidence            9887443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.47  E-value=0.00012  Score=68.60  Aligned_cols=296  Identities=12%  Similarity=0.125  Sum_probs=164.2

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecc-cCcc---cce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY-ITNK---ASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN   80 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~-~~h~---~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~   80 (444)
                      +..|++++.++.|.-+|..+++..-+.-..... ..+.   ..+ ..+.+.   ...++.++.++.+.-.|..+|+.+..
T Consensus        77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~v~~~t~~g~l~alda~tG~~~W~  153 (573)
T d1kb0a2          77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW---KGKVYVGAWDGRLIALDAATGKEVWH  153 (573)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE---CCcEEEEecccceeeeccccccceec
Confidence            457888889999999999988752110000000 0000   111 123333   45677888889999999999988765


Q ss_pred             eeeccccccEEEE--Ee--CCCeEEEEec------CCcEEEEEcCCCCcccccccc------------------------
Q psy8152          81 TDVSFGEGDIVGV--SR--YDECILTAVK------SGDVKLWRYKTEPDQWTNFNV------------------------  126 (444)
Q Consensus        81 ~~~~~~~~~v~~~--s~--~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~------------------------  126 (444)
                      .....+...-..+  .|  .+..+++++.      .|.|+.+|..+|+.++.+...                        
T Consensus       154 ~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~  233 (573)
T d1kb0a2         154 QNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG  233 (573)
T ss_dssp             EETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred             ccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCC
Confidence            5432221111111  11  2344454432      468999999999887633211                        


Q ss_pred             -------CCCe-EEEEEeccCCEEEEeeC-------------------CCeEEEEEcCCceeeeeeecccceeeEeeeCC
Q psy8152         127 -------GPQL-ECMKHNKHSNIIATGGK-------------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKP  179 (444)
Q Consensus       127 -------~~~v-~~~~~~~~~~~l~~~~~-------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (444)
                             ...+ ...++.+...+++.+..                   ...|.-.|+++++.....+...+         
T Consensus       234 ~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~---------  304 (573)
T d1kb0a2         234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG---------  304 (573)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT---------
T ss_pred             ceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCc---------
Confidence                   0111 12345554444443221                   12456667777776665554333         


Q ss_pred             CcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC------------------------
Q psy8152         180 DEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD------------------------  232 (444)
Q Consensus       180 ~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------------------------  232 (444)
                      +..+.....+........++   ..++.++.+|.+.++|..   +++.+.......                        
T Consensus       305 d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~---tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (573)
T d1kb0a2         305 DNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT---NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSK  381 (573)
T ss_dssp             CCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTS
T ss_pred             ccccccccceeeecceecCCCceeeeeeccccceeEEeccc---cccccccccccccccccccccccceeeeeecccccc
Confidence            11111111122223333344   467788899999999987   555444322110                        


Q ss_pred             -----------CCeeEEEEccCCCEEEEEcCC-------------------------------------------CcEEE
Q psy8152         233 -----------VALSCITTTNQSHYVIVGSTT-------------------------------------------GDMMA  258 (444)
Q Consensus       233 -----------~~i~~~~~~~~~~~l~~~~~d-------------------------------------------g~i~i  258 (444)
                                 ..-..++++|+..++++...+                                           |.|.-
T Consensus       382 ~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~A  461 (573)
T d1kb0a2         382 PQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLA  461 (573)
T ss_dssp             CEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEE
T ss_pred             ceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEE
Confidence                       001234677776666653322                                           24666


Q ss_pred             EEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc
Q psy8152         259 VDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR  318 (444)
Q Consensus       259 wd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~  318 (444)
                      ||+.+ ++.+.+++.. .+...=..+-.+.+|++|+.||.++.||..+|+.+.++.....
T Consensus       462 iD~~t-Gk~~W~~~~~-~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~  519 (573)
T d1kb0a2         462 WDPVA-QKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG  519 (573)
T ss_dssp             EETTT-TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             eCCCC-CceEeeecCC-CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCC
Confidence            77777 7777666522 1111112223567888899999999999999999998875443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.44  E-value=6.1e-05  Score=65.54  Aligned_cols=281  Identities=8%  Similarity=0.080  Sum_probs=157.5

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeeccc-----Ccc-----------------------------cce--EEEee
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-----TNK-----------------------------ASV--LALNW   50 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-----~h~-----------------------------~~v--~~~~~   50 (444)
                      .-|.+|+..|.|+++-+-+.+. .+.+..+...     +..                             +-.  ..+.+
T Consensus        14 y~f~SgG~sG~v~v~G~PSmR~-l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~   92 (459)
T d1fwxa2          14 YGFWSSGQSGEMRILGIPSMRE-LMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSF   92 (459)
T ss_dssp             EEEECCBTTCEEEEEEETTCCE-EEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEE
T ss_pred             EEEeeCCccceEEEEecCCcce-EEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccc
Confidence            3477889999999999988765 2222221110     000                             011  13333


Q ss_pred             ec--cCCcEEEEEE-cCCeEEEEeCCCCccccceeeccccccEEEEE----eCCCeEEEEecC-----------------
Q psy8152          51 GN--VEESELLIAY-SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS----RYDECILTAVKS-----------------  106 (444)
Q Consensus        51 ~~--~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s----~~~~~l~~~~~d-----------------  106 (444)
                      ..  ++|++|++.. .+++|.+.|+.+.++.+.+..+. ...+..+.    |+-.+++.++..                 
T Consensus        93 TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn-~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y  171 (459)
T d1fwxa2          93 TEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY  171 (459)
T ss_dssp             ETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-E
T ss_pred             cCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCC-CCCCceeecccCCCeEEEEccCccccccCCCCccccchhhc
Confidence            31  2578888766 57899999999998877665533 33334443    234566665553                 


Q ss_pred             -CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC---------------eEEEEEcCCceee------ee
Q psy8152         107 -GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN---------------DLKLWDLNTTKNI------FS  164 (444)
Q Consensus       107 -g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~vwd~~~~~~~------~~  164 (444)
                       +.+.++|..+.+..+.. .-......+.++++|+++++.+.+.               .+.++++......      ..
T Consensus       172 ~~~~t~ID~~tm~V~~QV-~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~e  250 (459)
T d1fwxa2         172 VNVFTAVDADKWEVAWQV-LVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  250 (459)
T ss_dssp             EEEEEEEETTTTEEEEEE-EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             ceEEEEEecCCceEEEEe-eeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEE
Confidence             23567888877766522 2344677899999999999876431               2444444221000      00


Q ss_pred             eecccceeeEeeeC--CCc-c--cccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCC-------CCC-ccceEEEeC
Q psy8152         165 AKNVSHRVLVYSVK--PDE-F--DLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKI-------TTQ-RRPVLKVDI  230 (444)
Q Consensus       165 ~~~~~~~~~~~~~~--~~~-~--~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~-------~~~-~~~~~~~~~  230 (444)
                      +    ..+.++...  +.. .  ....+.....+.++|+|++++++ ..+.++.++|++.       ... ...+..-..
T Consensus       251 i----ngV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e  326 (459)
T d1fwxa2         251 L----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE  326 (459)
T ss_dssp             E----TTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB
T ss_pred             e----CCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecc
Confidence            0    001111100  000 0  01112236678999999887765 4588999999971       000 111111111


Q ss_pred             CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC---------CCcceeEeccccCceeE-----EEecCCCCEEEEEE
Q psy8152         231 PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG---------KGKPCYKYKGFAGCVKD-----IACPLNENLILSVS  294 (444)
Q Consensus       231 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~h~~~i~~-----~~~s~~~~~l~s~~  294 (444)
                      ........+|...|+-..+-.-|..|.-|++..         ....+..+.-|-.+=.-     -...|+|++|++..
T Consensus       327 lglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         327 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred             cCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEec
Confidence            122335567888887666778999999999853         02344555544332111     13468999999876

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.33  E-value=0.00063  Score=63.64  Aligned_cols=296  Identities=13%  Similarity=0.070  Sum_probs=160.8

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeeccc--Ccccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI--TNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD   82 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~--~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~   82 (444)
                      +..|++++.++.|.-.|..+++..-+.-......  .....+ ..+++.   +..++.++.++.+.-.|..+|+.+....
T Consensus        68 ~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~---~~~i~~~t~~~~l~alda~tG~~~W~~~  144 (582)
T d1flga_          68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY---GDKVFFGTLDASVVALNKNTGKVVWKKK  144 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE---TTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred             CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe---CCceEEecCCCeEEEecccccceeeeec
Confidence            4578888899999999999988531110010000  000111 223343   5678889999999999999998775543


Q ss_pred             eccc-------cccEEEEE-eCCCeEEEEe-------cCCcEEEEEcCCCCccccccccC--------------------
Q psy8152          83 VSFG-------EGDIVGVS-RYDECILTAV-------KSGDVKLWRYKTEPDQWTNFNVG--------------------  127 (444)
Q Consensus        83 ~~~~-------~~~v~~~s-~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~--------------------  127 (444)
                      ...+       ..++..-. .....++..+       ..+.|.-+|..+++.++.+....                    
T Consensus       145 ~~~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~d~~~~g~~~~~  224 (582)
T d1flga_         145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP  224 (582)
T ss_dssp             CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred             ccCCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccCCccccccccccccccccccc
Confidence            2211       11111110 1123333332       34568888888887765322111                    


Q ss_pred             --------------------CCe-EEEEEeccCCEEEEeeC------------------------CCeEEEEEcCCceee
Q psy8152         128 --------------------PQL-ECMKHNKHSNIIATGGK------------------------ENDLKLWDLNTTKNI  162 (444)
Q Consensus       128 --------------------~~v-~~~~~~~~~~~l~~~~~------------------------d~~i~vwd~~~~~~~  162 (444)
                                          ..+ ..+++.+...+++.+..                        ...|.-.|+.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~  304 (582)
T d1flga_         225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK  304 (582)
T ss_dssp             TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred             cCCCccccccCCccceecCCCcccccceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhh
Confidence                                112 23567776666665431                        235677788888877


Q ss_pred             eeeecccceeeEeeeCCCcccccCccc--eeEEEEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCC-------
Q psy8152         163 FSAKNVSHRVLVYSVKPDEFDLRRPVW--VNGISFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-------  231 (444)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------  231 (444)
                      ..++...+         +..+......  +..+...+..  ..++..+..+.+.++|..   +++.+......       
T Consensus       305 W~~q~~~~---------D~wd~d~~~~p~l~d~~~~~g~~~~~v~~~~k~g~~~vldr~---tG~~i~~~~~~~~~~~~~  372 (582)
T d1flga_         305 WFYQHTPN---------DAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS---NGKLQNAFPFVDNITWAS  372 (582)
T ss_dssp             EEEESSTT---------CCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT---TCCEEEEEESSSCCCSEE
T ss_pred             hccccccc---------ccccccccccccccccccccccccceeEeecccccEEeeccc---CCcccccccccCcccccc
Confidence            77665444         1111111111  1222222211  345566777778877766   33222111000       


Q ss_pred             --------------------------------------CCCeeEEEEccCCCEEEEEcC---------------------
Q psy8152         232 --------------------------------------DVALSCITTTNQSHYVIVGST---------------------  252 (444)
Q Consensus       232 --------------------------------------~~~i~~~~~~~~~~~l~~~~~---------------------  252 (444)
                                                            ...-..++++|+..++++...                     
T Consensus       373 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~gg~~w~~~a~dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~  452 (582)
T d1flga_         373 HIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLG  452 (582)
T ss_dssp             EECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred             ccccccccceeccccccccccccccccceEEECCCccCCcccccceecCCCCceeeeccccccccccccccccccccccc
Confidence                                                  001123355555444433221                     


Q ss_pred             ------------CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc
Q psy8152         253 ------------TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR  318 (444)
Q Consensus       253 ------------dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~  318 (444)
                                  .|.|.-+|+.+ ++.+.+.+.+ .++..-.++..+.++++|+.||.++.+|..+|+.+.++.....
T Consensus       453 ~~~~~~~~~~~~~G~l~AiD~~T-G~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~  528 (582)
T d1flga_         453 MGFRIKRMYDDHVGSLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG  528 (582)
T ss_dssp             EEEEEEESCSSCSEEEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             cCccccccccCCCCeEEEEcCCC-CcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCC
Confidence                        25677788888 8888777633 2222222334567888899999999999999999998875444

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.31  E-value=0.00027  Score=65.92  Aligned_cols=277  Identities=11%  Similarity=0.045  Sum_probs=148.6

Q ss_pred             cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc------CCeEEEEeCCCCcccc
Q psy8152           6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS------GQKIKIYDTDFKNFNT   79 (444)
Q Consensus         6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~------d~~i~vw~~~~~~~~~   79 (444)
                      +..|+.++.+|.|.-.|..+++... .. .+........++.--.- . ...++.+..      .|.|+-+|+.+|+.+.
T Consensus       115 ~~~i~~~~~~g~l~alda~tG~~~w-~~-~~~~~~~~~~~t~~p~v-~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W  190 (571)
T d2ad6a1         115 AGQIVKKQANGHLLALDAKTGKINW-EV-EVCDPKVGSTLTQAPFV-A-KDTVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEE-EE-ECCCGGGTCBCCSCCEE-E-TTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             CCeEEEEeCCCcEEeeehhhhhhhc-cc-cccccccccceeecCeE-e-CCeEEEeeccccccccCcEEEEECCCCcEEE
Confidence            3568889999999999999998421 11 11111111122211111 1 344455442      6889999999999887


Q ss_pred             ceeeccc-----------------------------------cccE---EEEEeCCCeEEEEec----------------
Q psy8152          80 NTDVSFG-----------------------------------EGDI---VGVSRYDECILTAVK----------------  105 (444)
Q Consensus        80 ~~~~~~~-----------------------------------~~~v---~~~s~~~~~l~~~~~----------------  105 (444)
                      .+.....                                   ...+   .++.+...+++.+..                
T Consensus       191 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~  270 (571)
T d2ad6a1         191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW  270 (571)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred             EEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCcccccccccccc
Confidence            6532210                                   0111   244455555554433                


Q ss_pred             CCcEEEEEcCCCCccccccccCCCe---------EEEEEeccCC---EEEEeeCCCeEEEEEcCCceeeeeeecccceee
Q psy8152         106 SGDVKLWRYKTEPDQWTNFNVGPQL---------ECMKHNKHSN---IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVL  173 (444)
Q Consensus       106 dg~i~iw~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~---~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~  173 (444)
                      ...+...|+++++.++.+..+...+         ....+..+++   .++.++.+|.+.++|..+++.+...+.......
T Consensus       271 s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~  350 (571)
T d2ad6a1         271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV  350 (571)
T ss_dssp             TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred             ccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccc
Confidence            2457778899998877444322211         1122222443   567888999999999999998865433221111


Q ss_pred             EeeeCCCcc---------c-----------ccCcc-ceeEEEEecCCCEEEEEeCC------------------------
Q psy8152         174 VYSVKPDEF---------D-----------LRRPV-WVNGISFLPNSDKVAVCSKQ------------------------  208 (444)
Q Consensus       174 ~~~~~~~~~---------~-----------~~~~~-~i~~~~~~~~~~~l~~~~~d------------------------  208 (444)
                      .....+...         .           ..... .=...+++|...++++...+                        
T Consensus       351 ~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (571)
T d2ad6a1         351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA  430 (571)
T ss_dssp             EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred             cccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCcccccccee
Confidence            111000000         0           00000 00124566665555543322                        


Q ss_pred             -------------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--
Q psy8152         209 -------------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--  273 (444)
Q Consensus       209 -------------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--  273 (444)
                                   |.|.-+|+.   +++.+.+.......... .++..+.++++|+.||.++.+|.++ ++.+.++.-  
T Consensus       431 ~~~~~~~~~~~~~G~l~AiD~~---TG~~~W~~~~~~~~~~g-~l~TagglVf~G~~dg~l~A~Da~t-Ge~lW~~~l~~  505 (571)
T d2ad6a1         431 MYPGPNGPTKKEMGQIRAFDLT---TGKAKWTKWEKFAAWGG-TLYTKGGLVWYATLDGYLKALDNKD-GKELWNFKMPS  505 (571)
T ss_dssp             EEECTTSTTSCCCEEEEEECTT---TCCEEEEEEESSCCCSB-CEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECSS
T ss_pred             eccccCCcccCCcccEEEeccC---CCceeeEcCCCCCCCcc-eeEecCCEEEEECCCCeEEEEECCC-CcEEEEEECCC
Confidence                         356666666   55555544322111111 1222466888899999999999999 999988872  


Q ss_pred             --ccCceeEEEecCCCC-EEEEEE
Q psy8152         274 --FAGCVKDIACPLNEN-LILSVS  294 (444)
Q Consensus       274 --h~~~i~~~~~s~~~~-~l~s~~  294 (444)
                        +..+   +.|..+|+ ||++..
T Consensus       506 ~~~a~P---~ty~~dGkqYi~v~~  526 (571)
T d2ad6a1         506 GGIGSP---MTYSFKGKQYIGSMY  526 (571)
T ss_dssp             CCCSCC---EEEEETTEEEEEEEE
T ss_pred             Cceecc---eEEEECCEEEEEEEe
Confidence              2233   34555774 665544

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.17  E-value=0.00098  Score=58.70  Aligned_cols=275  Identities=7%  Similarity=-0.049  Sum_probs=138.4

Q ss_pred             CcccEEEecCCC-----------cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-CeEEEEeC
Q psy8152           5 DDYNIYIGSSTG-----------AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-QKIKIYDT   72 (444)
Q Consensus         5 ~~~~l~~g~~dg-----------~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-~~i~vw~~   72 (444)
                      +++.++.|+...           .+.+||..+++-  ........ .|.....+.++. +++..++.|+.+ ..+.+||.
T Consensus        30 ~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w--~~~~~~~~-~~~~~~~~~~~~-~~g~i~v~Gg~~~~~~~~yd~  105 (387)
T d1k3ia3          30 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV--SDRTVTVT-KHDMFCPGISMD-GNGQIVVTGGNDAKKTSLYDS  105 (387)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB--CCCEEEEC-SCCCSSCEEEEC-TTSCEEEECSSSTTCEEEEEG
T ss_pred             CCEEEEEEeecCcccCCCCCceeEEEEEECCCCcE--eecCCCCC-CcccceeEEEEe-cCCcEEEeecCCCcceeEecC
Confidence            456666666421           266888887763  11222221 333333455677 688888888665 68999999


Q ss_pred             CCCccccceeeccc-cccEEEEEeCCCeEEEEecC------CcEEEEEcCCCCcccc--------ccc-cC-----CCeE
Q psy8152          73 DFKNFNTNTDVSFG-EGDIVGVSRYDECILTAVKS------GDVKLWRYKTEPDQWT--------NFN-VG-----PQLE  131 (444)
Q Consensus        73 ~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~--------~~~-~~-----~~v~  131 (444)
                      .+......-..+.. .....++.+++++++.++..      ..+.+||..+.+....        ... +.     ..-.
T Consensus       106 ~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (387)
T d1k3ia3         106 SSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHA  185 (387)
T ss_dssp             GGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred             ccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeecccee
Confidence            87765443222221 22234446788988888753      3688999876543210        000 00     0111


Q ss_pred             EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe-cCCCEEEEEeCCc-
Q psy8152         132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-PNSDKVAVCSKQG-  209 (444)
Q Consensus       132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~-  209 (444)
                      .+...++++.++.++..+.+.+++..+.............    ...+      ....-.++.+. .+++.++.|+... 
T Consensus       186 ~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~~~~g~v~v~GG~~~~  255 (387)
T d1k3ia3         186 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR----GVAP------DAMCGNAVMYDAVKGKILTFGGSPDY  255 (387)
T ss_dssp             CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT----EECC------CCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred             EEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCc----ccCc------ccccccEEEeeccCCceEEEEeccCC
Confidence            1223347778888877777878877765432221110000    0000      00011233332 3456666665321 


Q ss_pred             -------eEEEEEcCCCCCccceEEEe---CCCCCeeEEEEccCCCEEEEEcCCC-----------cEEEEEcCCCCcce
Q psy8152         210 -------YVRVYDPKITTQRRPVLKVD---IPDVALSCITTTNQSHYVIVGSTTG-----------DMMAVDLRGKGKPC  268 (444)
Q Consensus       210 -------~i~i~d~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg-----------~i~iwd~~~~~~~~  268 (444)
                             ...+.++.............   .....-.+....++++++++|+.+.           .+.+||..+ .+ -
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~-~~-W  333 (387)
T d1k3ia3         256 QDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ-DT-F  333 (387)
T ss_dssp             SSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG-TE-E
T ss_pred             CCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCC-Ce-E
Confidence                   33344433000111111111   1112233566678999999887531           478899876 43 1


Q ss_pred             eEecccc-Cc--eeEEEecCCCCEEEEEEC
Q psy8152         269 YKYKGFA-GC--VKDIACPLNENLILSVSL  295 (444)
Q Consensus       269 ~~~~~h~-~~--i~~~~~s~~~~~l~s~~~  295 (444)
                      ..+.... ..  -....+.++|+.|+.|+.
T Consensus       334 ~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         334 YKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             EECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence            1221110 00  012345689999988874

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=0.0017  Score=53.69  Aligned_cols=234  Identities=10%  Similarity=-0.025  Sum_probs=133.5

Q ss_pred             cEEEEEEcCCeEEEEeCCCCccccc---eeeccccccEEEE--EeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCC
Q psy8152          56 SELLIAYSGQKIKIYDTDFKNFNTN---TDVSFGEGDIVGV--SRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQ  129 (444)
Q Consensus        56 ~~l~~~~~d~~i~vw~~~~~~~~~~---~~~~~~~~~v~~~--s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~  129 (444)
                      .+|+.+.. +.|+-..+........   .....+...+.++  .+..++|+.+ ...+.|+..++...............
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~   80 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence            34444444 4677677654332211   1111223334444  4445655554 45677888888765544323233356


Q ss_pred             eEEEEEeccCCEEE-EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-
Q psy8152         130 LECMKHNKHSNIIA-TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-  207 (444)
Q Consensus       130 v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-  207 (444)
                      +.++++..-+..|+ +-...+.|.+.++........+.....                  .+..+++.|...+|..... 
T Consensus        81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~------------------~p~~l~vdp~~g~ly~t~~~  142 (263)
T d1npea_          81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV------------------NPRGIVTDPVRGNLYWTDWN  142 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS------------------SEEEEEEETTTTEEEEEECC
T ss_pred             ccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEeccccc------------------CCcEEEEecccCcEEEeecC
Confidence            88999987444554 555677899999876443222221112                  4789999998776664432 


Q ss_pred             --CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152         208 --QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP  284 (444)
Q Consensus       208 --d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s  284 (444)
                        ...|..-++.  +.... ......-.....+++.+.++.|+.+ ...+.|...++.. ......+.+... ..+|++.
T Consensus       143 ~~~~~I~r~~~d--G~~~~-~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g-~~~~~v~~~~~~-P~~lav~  217 (263)
T d1npea_         143 RDNPKIETSHMD--GTNRR-ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEGLQY-PFAVTSY  217 (263)
T ss_dssp             SSSCEEEEEETT--SCCCE-EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEEEEECCCS-EEEEEEE
T ss_pred             CCCcEEEEecCC--CCCce-eeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCC-CCeEEEECCCCC-cEEEEEE
Confidence              2234444555  22222 2122233456789998877766554 5678899999875 443333444333 3577775


Q ss_pred             CCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         285 LNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       285 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                       .+.+..+-...+.|...+..+++.+..+.
T Consensus       218 -~~~lYwtd~~~~~I~~~~~~~g~~~~~~~  246 (263)
T d1npea_         218 -GKNLYYTDWKTNSVIAMDLAISKEMDTFH  246 (263)
T ss_dssp             -TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred             -CCEEEEEECCCCEEEEEECCCCccceEEC
Confidence             33344444467889999999888776654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=0.0018  Score=53.58  Aligned_cols=244  Identities=11%  Similarity=0.053  Sum_probs=138.3

Q ss_pred             CCcEEEEEcCCCccceeee-eeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCCCccccceeeccccccEEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNI-QNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG   92 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~   92 (444)
                      .+.|+-..+.......... ..+.  .+...+.+|+|. ...+.|+-+ ...+.|+..++........+........-.+
T Consensus         9 ~~~I~~~~ld~~~~~~~~~~~~~~--~~~~~~~~ld~D-~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iA   85 (263)
T d1npea_           9 TGKIERLPLERNTMKKTEAKAFLH--IPAKVIIGLAFD-CVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIA   85 (263)
T ss_dssp             EEEEEEEEESSSCBCGGGCEEEEE--EEEEEEEEEEEE-TTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEE
T ss_pred             CCeEEEEECCCccccccccccccc--cCCCcEEEEEEE-eCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEE
Confidence            4577777776554211111 1111  345568889999 566666655 4567888888875544433321111223344


Q ss_pred             EEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCceeeeeeecc
Q psy8152          93 VSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTKNIFSAKNV  168 (444)
Q Consensus        93 ~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~  168 (444)
                      +.+-++.|. +-...+.|.+.++....+..........+..+++.|...+|+....   ...|.--++............
T Consensus        86 vD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~  165 (263)
T d1npea_          86 LDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN  165 (263)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT
T ss_pred             EeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeec
Confidence            555466555 4455678999998866543222233467889999996555554332   223444455432222111111


Q ss_pred             cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEE
Q psy8152         169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV  247 (444)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  247 (444)
                      -.                  ....+++.+.++.|..+ ...+.|...++.   .......+.+... ...|++. .+.+.
T Consensus       166 ~~------------------~P~glaiD~~~~~lYw~d~~~~~I~~~~~~---g~~~~~v~~~~~~-P~~lav~-~~~lY  222 (263)
T d1npea_         166 LG------------------LPNGLTFDAFSSQLCWVDAGTHRAECLNPA---QPGRRKVLEGLQY-PFAVTSY-GKNLY  222 (263)
T ss_dssp             CS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEEEEECCCS-EEEEEEE-TTEEE
T ss_pred             cc------------------ccceEEEeecCcEEEEEeCCCCEEEEEECC---CCCeEEEECCCCC-cEEEEEE-CCEEE
Confidence            11                  46889999887766554 567899999988   2222222333333 3577775 44455


Q ss_pred             EEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecC
Q psy8152         248 IVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPL  285 (444)
Q Consensus       248 ~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~  285 (444)
                      .+-...+.|...|..+ ++.+..+.. .......+++.+
T Consensus       223 wtd~~~~~I~~~~~~~-g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         223 YTDWKTNSVIAMDLAI-SKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             EEETTTTEEEEEETTT-TEEEEEECCSSCCCCCCEEEEC
T ss_pred             EEECCCCEEEEEECCC-CccceEECCCCCCCcceEEEeC
Confidence            5555778899999888 777766642 223444555544

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.07  E-value=0.0018  Score=53.13  Aligned_cols=231  Identities=7%  Similarity=0.084  Sum_probs=144.2

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEE
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIAT  144 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  144 (444)
                      .+|.|.|+...........   .....-++|..+.|+.-+ ..++.++|+++.+.++ ......+|.--.|- +.+.|+.
T Consensus        45 ~~VvIidl~n~~~~~Rrpi---~AdsAIMhP~~~IiALra-g~~LQiFnletK~klk-s~~~~e~VvfWkWi-s~~~L~l  118 (327)
T d1utca2          45 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHTMTDDVTFWKWI-SLNTVAL  118 (327)
T ss_dssp             EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE-EEECSSCCCEEEES-SSSEEEE
T ss_pred             ceEEEEECCCCCcceeccc---chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhc-eEEcCCCcEEEEec-CCCEEEE
Confidence            5788999976654433221   222233468888777765 5589999999988875 44456677666776 4456665


Q ss_pred             eeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-------CCceEEEEEc
Q psy8152         145 GGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-------KQGYVRVYDP  216 (444)
Q Consensus       145 ~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~d~~i~i~d~  216 (444)
                      .+. ..|+-|++.. ..+...+..+..             + ....|..-..+++.++++..+       -.|.+.+|..
T Consensus       119 VT~-taVYHW~~~g~s~P~k~fdR~~~-------------L-~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~  183 (327)
T d1utca2         119 VTD-NAVYHWSMEGESQPVKMFDRHSS-------------L-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV  183 (327)
T ss_dssp             ECS-SEEEEEESSSSCCCEEEEECCGG-------------G-TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET
T ss_pred             EcC-CceEEEcccCCCCchhhhhhccc-------------c-cCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEe
Confidence            553 5799999964 334444444433             1 123566677777777766432       2478899998


Q ss_pred             CCCCCccceEEEeCCCCCeeEEEEccC--C-CEEEE---EcCCCcEEEEEcCCCC--cce-----eEec----cccCcee
Q psy8152         217 KITTQRRPVLKVDIPDVALSCITTTNQ--S-HYVIV---GSTTGDMMAVDLRGKG--KPC-----YKYK----GFAGCVK  279 (444)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~l~~---~~~dg~i~iwd~~~~~--~~~-----~~~~----~h~~~i~  279 (444)
                      .    .+.-+.+.+|......+.+.-+  . ..++.   +...+.++|.++..+.  .+.     ..+.    ......-
T Consensus       184 e----r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPv  259 (327)
T d1utca2         184 D----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV  259 (327)
T ss_dssp             T----TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEE
T ss_pred             c----cCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEE
Confidence            7    5555566777554444433211  1 12222   3344688999886621  111     1111    1133445


Q ss_pred             EEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee
Q psy8152         280 DIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT  320 (444)
Q Consensus       280 ~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~  320 (444)
                      ++..++.-..++.-+.-|.|++||+.++.++..-. ....|.
T Consensus       260 amqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF  301 (327)
T d1utca2         260 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF  301 (327)
T ss_dssp             EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             EEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceE
Confidence            78888888899999999999999999999988765 344444

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.06  E-value=0.00057  Score=63.58  Aligned_cols=292  Identities=11%  Similarity=0.072  Sum_probs=163.8

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeecccc-----cc---E-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE-----GD---I-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-----~~---v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      +..|++++.++.|.-.|..+|+.+-.+......     ..   + ..+...+..++.+..++.|.-.|..+++.++....
T Consensus        66 ~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~Alda~tG~~~w~~~~  145 (560)
T d1kv9a2          66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT  145 (560)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEEEeCCCEEEEEECCCCcEEeccCc
Confidence            456777788899999999999988776321110     00   0 11223356788888999999999999988874332


Q ss_pred             cC-CCeEEEEEec--cCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeee-----------CCCc-c--
Q psy8152         126 VG-PQLECMKHNK--HSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSV-----------KPDE-F--  182 (444)
Q Consensus       126 ~~-~~v~~~~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~--  182 (444)
                      .. ..-..+.-.|  ....++.+..      .|.|.-+|.++++.+.++.........-..           .... .  
T Consensus       146 ~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (560)
T d1kv9a2         146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL  225 (560)
T ss_dssp             SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred             cCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccc
Confidence            11 1111111112  2334444432      367999999999999887543210000000           0000 0  


Q ss_pred             cccCccceeEEEEecCCCEEEEEeC-------------------CceEEEEEcCCCCCccceEEEeCCCCCee-------
Q psy8152         183 DLRRPVWVNGISFLPNSDKVAVCSK-------------------QGYVRVYDPKITTQRRPVLKVDIPDVALS-------  236 (444)
Q Consensus       183 ~~~~~~~i~~~~~~~~~~~l~~~~~-------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~-------  236 (444)
                      ......|. .+++.|...++..+..                   ...|.-.|++   +++....++.....+.       
T Consensus       226 ~~G~~~W~-~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~---tG~~~W~~Q~~~~D~wd~d~~~~  301 (560)
T d1kv9a2         226 GGGGTVWD-SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD---TGKLAWHYQVTPGDSWDFTATQQ  301 (560)
T ss_dssp             CEECCCCS-CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT---TCCEEEEEESSTTCCSCCCCCSC
T ss_pred             cCCCCccc-ccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCC---ccceeEEEeccccccccccccce
Confidence            00011121 2456666665554322                   2345566776   5555555443221111       


Q ss_pred             --EEEEccCC---CEEEEEcCCCcEEEEEcCCCCcceeEecccc----------------------------------C-
Q psy8152         237 --CITTTNQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA----------------------------------G-  276 (444)
Q Consensus       237 --~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~----------------------------------~-  276 (444)
                        -+.+..++   ..++.+..+|.++++|..+ ++++...+.-.                                  + 
T Consensus       302 ~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~t-G~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg  380 (560)
T d1kv9a2         302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA  380 (560)
T ss_dssp             EEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred             eeeeeeecCCceeeeeeecCccceEEEEecCC-CcccccccccccccccccChhhccccccccccccccceeeeeccccc
Confidence              12222233   3567789999999999998 88775443100                                  0 


Q ss_pred             -ceeEEEecCCCCEEEEEEC------------------------------------CCcEEEEEcCCCceEEEeecCCce
Q psy8152         277 -CVKDIACPLNENLILSVSL------------------------------------DRHFRVHDFHSKKLLRKDYMQSRL  319 (444)
Q Consensus       277 -~i~~~~~s~~~~~l~s~~~------------------------------------dg~i~vw~~~~~~~~~~~~~~~~i  319 (444)
                       .-...+++|+..+++....                                    .|.|.-||+.+++.+.+.....+.
T Consensus       381 ~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~~  460 (560)
T d1kv9a2         381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHW  460 (560)
T ss_dssp             SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred             cccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCCCC
Confidence             0013456676666554432                                    256788899999888877655443


Q ss_pred             eEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152         320 TSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN  360 (444)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~  360 (444)
                      .+-.+.         -.+.++..++.|+.++-+|..+++.+
T Consensus       461 ~gg~l~---------TagglVF~G~~dg~l~A~Da~tGe~L  492 (560)
T d1kv9a2         461 NGGTLS---------TAGNLVFQGTAAGQMHAYSADKGEAL  492 (560)
T ss_dssp             CCCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCceeE---------ECCCEEEEECCCCcEEEEECCCCcEe
Confidence            322211         12356667888999999999887764

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.99  E-value=0.0025  Score=59.47  Aligned_cols=272  Identities=12%  Similarity=0.047  Sum_probs=147.3

Q ss_pred             ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEE-EeeeccCCcEEEEEEc------CCeEEEEeCCCCcccc
Q psy8152           7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLA-LNWGNVEESELLIAYS------GQKIKIYDTDFKNFNT   79 (444)
Q Consensus         7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~~~~~------d~~i~vw~~~~~~~~~   79 (444)
                      .+|+.++.++.|.-.|..+++.. -.+. .........++. -.+.   ++.++++..      .|.|+-+|+.+|+.+-
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~-w~~~-~~d~~~~~~~t~~P~v~---~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W  196 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETV-WKVE-NSDIKVGSTLTIAPYVV---KDKVIIGSSGAELGVRGYLTAYDVKTGEQVW  196 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEE-EEEE-CCCGGGTCBCCSCCEEE---TTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             eEEEEEeCCCCeEeeccccCcee-cccc-ccccccccccccCCcEE---CCeEEEeeccccccccCceEEEECCCCcEEE
Confidence            35889999999999999998852 1111 111011111221 1122   455666543      4899999999999887


Q ss_pred             ceeecc-----------------------------------ccccE---EEEEeCCCeEEEEec----------------
Q psy8152          80 NTDVSF-----------------------------------GEGDI---VGVSRYDECILTAVK----------------  105 (444)
Q Consensus        80 ~~~~~~-----------------------------------~~~~v---~~~s~~~~~l~~~~~----------------  105 (444)
                      .+....                                   ....+   .++.+...++..+..                
T Consensus       197 ~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~y  276 (596)
T d1w6sa_         197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW  276 (596)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred             EeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccc
Confidence            653211                                   00111   233444455555432                


Q ss_pred             CCcEEEEEcCCCCccccccc--cC-------CCeEEEEE-eccC---CEEEEeeCCCeEEEEEcCCceeeeeeeccccee
Q psy8152         106 SGDVKLWRYKTEPDQWTNFN--VG-------PQLECMKH-NKHS---NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRV  172 (444)
Q Consensus       106 dg~i~iw~~~~~~~~~~~~~--~~-------~~v~~~~~-~~~~---~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~  172 (444)
                      ...|...|+.+++.++.+..  |.       ..+..+.. ..++   ..++.+..+|.+.++|..+++.+...+......
T Consensus       277 s~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~  356 (596)
T d1w6sa_         277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN  356 (596)
T ss_dssp             SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred             cccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecccccccc
Confidence            23477889999998773332  21       11222222 1233   367788999999999999999876543221100


Q ss_pred             eEeee------------------------CCCcccccCccceeEEEEecCCCEEEEEeC---------------------
Q psy8152         173 LVYSV------------------------KPDEFDLRRPVWVNGISFLPNSDKVAVCSK---------------------  207 (444)
Q Consensus       173 ~~~~~------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------------------  207 (444)
                      ..-..                        .|......   .-..++++|...+++....                     
T Consensus       357 ~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~---nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g  433 (596)
T d1w6sa_         357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYH---NQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVG  433 (596)
T ss_dssp             SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSS---CSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred             ccccccccccccccCccccccCCccceeEeccccccc---ccCccccCCCCceEEecccccccccccccccccccccccc
Confidence            00000                        00000000   0012345554444333221                     


Q ss_pred             ------------------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152         208 ------------------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY  269 (444)
Q Consensus       208 ------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  269 (444)
                                        -|.|.-||+.   +++.+.+.... .++.+-.++..+.++++|+.||.++.+|..+ ++.+.
T Consensus       434 ~~~~~~~~~~g~~~~~~~~G~l~A~D~~---TG~~~W~~~~~-~~~~gg~lsTagglVF~G~~Dg~l~A~Da~T-Ge~LW  508 (596)
T d1w6sa_         434 ATLNMYPGPKGDRQNYEGLGQIKAYNAI---TGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDT-GDLLW  508 (596)
T ss_dssp             EEEEEEECTTSBTTTTBCCEEEEEECTT---TCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTT-CCEEE
T ss_pred             cccccccCcccCcccCCCcceEEEEeCC---CCceecccCCC-CCCccceeEecCCEEEEECCCCeEEEEECCC-CcEee
Confidence                              1456667766   55555443321 1122222334577888999999999999999 99999


Q ss_pred             Eecc----ccCceeEEEecCCCC-EEEEEE
Q psy8152         270 KYKG----FAGCVKDIACPLNEN-LILSVS  294 (444)
Q Consensus       270 ~~~~----h~~~i~~~~~s~~~~-~l~s~~  294 (444)
                      ++.-    +..+++   |..+|+ ||+...
T Consensus       509 ~~~~~~~~~a~P~t---Y~~dGkQYvav~~  535 (596)
T d1w6sa_         509 KFKIPSGAIGYPMT---YTHKGTQYVAIYY  535 (596)
T ss_dssp             EEECSSCCCSCCEE---EEETTEEEEEEEE
T ss_pred             EEECCCCcccCCeE---EEECCEEEEEEEe
Confidence            8872    333443   445774 665543

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=0.0037  Score=51.73  Aligned_cols=237  Identities=13%  Similarity=0.054  Sum_probs=134.1

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCCCCccc---cceeec-cccccE
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY-SGQKIKIYDTDFKNFN---TNTDVS-FGEGDI   90 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~---~~~~~~-~~~~~v   90 (444)
                      ..|+..++.+...     ..+.  .....+.+|.|. +..+.|+-+. ..+.|+..++......   ..+... .....-
T Consensus        10 ~~I~~~~l~~~~~-----~~~~--~~~~~~~~id~d-~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~g   81 (266)
T d1ijqa1          10 HEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (266)
T ss_dssp             SSEEEEETTSCCC-----EEEE--CSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             CeEEEEECCCCcc-----eeee--CCCCceEEEEEE-eCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcce
Confidence            3588889887653     2221  344567899999 5677666554 4567776666432211   111111 112223


Q ss_pred             EEEEeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeec
Q psy8152          91 VGVSRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKN  167 (444)
Q Consensus        91 ~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~  167 (444)
                      .++.+.++.|..+ ...+.|.+.++..................++++|...+|+...  ..+.|.-.++...........
T Consensus        82 lAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~  161 (266)
T d1ijqa1          82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  161 (266)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred             EEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccccc
Confidence            5555655555444 5567899999887665443444556788999999554554433  334566666654332222211


Q ss_pred             ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCE
Q psy8152         168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHY  246 (444)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  246 (444)
                      .-.                  ....+++.+.++.|..+ ...+.|...++. +.....+............|++. .+.+
T Consensus       162 ~~~------------------~p~gl~iD~~~~~lYw~d~~~~~I~~~~~d-G~~~~~~~~~~~~~~~p~~lav~-~~~l  221 (266)
T d1ijqa1         162 NIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVF-EDKV  221 (266)
T ss_dssp             SCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEE-TTEE
T ss_pred             ccc------------------eeeEEEeeccccEEEEecCCcCEEEEEECC-CCCEEEEEeCCCcccccEEEEEE-CCEE
Confidence            111                  47889999887766655 667899999988 22222232222222334567776 3444


Q ss_pred             EEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE
Q psy8152         247 VIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI  281 (444)
Q Consensus       247 l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~  281 (444)
                      ..+-..++.|+..+..+ +.....+......+..+
T Consensus       222 y~td~~~~~I~~~~~~~-g~~~~~~~~~~~~p~~i  255 (266)
T d1ijqa1         222 FWTDIINEAIFSANRLT-GSDVNLLAENLLSPEDM  255 (266)
T ss_dssp             EEEETTTTEEEEEETTT-CCCCEEEECSCSCCCCE
T ss_pred             EEEECCCCeEEEEECCC-CcceEEEEcCCCCceEE
Confidence            55556778888888777 76666665443333333

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.91  E-value=0.00092  Score=62.34  Aligned_cols=114  Identities=12%  Similarity=0.103  Sum_probs=70.4

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeecccc--------ccE-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE--------GDI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~--------~~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  125 (444)
                      +..|++++.++.|.-+|..+|+.+-.+......        ..+ ..+......++.++.++.+.-.|..+++.++....
T Consensus        77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~~g~l~alda~tG~~~W~~~~  156 (573)
T d1kb0a2          77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT  156 (573)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred             CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEecccceeeeccccccceecccC
Confidence            356777888899999999999988776421100        001 11222345677788899999899999988763322


Q ss_pred             --cCCCeEEEEEec--cCCEEEEeeC------CCeEEEEEcCCceeeeeeecc
Q psy8152         126 --VGPQLECMKHNK--HSNIIATGGK------ENDLKLWDLNTTKNIFSAKNV  168 (444)
Q Consensus       126 --~~~~v~~~~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~  168 (444)
                        +...-..+.-.|  -...+++++.      .|.|+-+|.++|+.+..+...
T Consensus       157 ~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~  209 (573)
T d1kb0a2         157 FEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSV  209 (573)
T ss_dssp             TTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred             ccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeec
Confidence              111111111111  2345555543      468999999999999876543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.73  E-value=0.014  Score=52.01  Aligned_cols=248  Identities=8%  Similarity=-0.046  Sum_probs=130.4

Q ss_pred             CcccceEEEeeeccCCcEEEEEE-c----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC--------
Q psy8152          40 TNKASVLALNWGNVEESELLIAY-S----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS--------  106 (444)
Q Consensus        40 ~h~~~v~~~~~~~~~~~~l~~~~-~----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d--------  106 (444)
                      ++.-.+..++++ |++++++.+- .    --.|+++|+.+++.+... +.........++++++.|+....+        
T Consensus       122 ~~~~~~~~~~~S-pd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~-i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~  199 (430)
T d1qfma1         122 DGTVALRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDG  199 (430)
T ss_dssp             SSCEEEEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred             cccceecceEec-CCCCEEEEEeccccCchheeEEeccCcceecccc-cccccccceEEcCCCCEEEEEEeccccCcccc
Confidence            344455667788 7888888532 2    247999999999876532 122122345677788876654332        


Q ss_pred             --------CcEEEEEcCCCCcccc--ccc--cCCCeEEEEEeccCCEEEEeeC---CCe--EEEEEcCCcee--------
Q psy8152         107 --------GDVKLWRYKTEPDQWT--NFN--VGPQLECMKHNKHSNIIATGGK---END--LKLWDLNTTKN--------  161 (444)
Q Consensus       107 --------g~i~iw~~~~~~~~~~--~~~--~~~~v~~~~~~~~~~~l~~~~~---d~~--i~vwd~~~~~~--------  161 (444)
                              ..|..+.+.+......  +..  ....+..+..++++++++....   ...  +.+.++.....        
T Consensus       200 ~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  279 (430)
T d1qfma1         200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW  279 (430)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred             cccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccce
Confidence                    2577777766543321  112  2234566777888888764332   233  44445433211        


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCccceEEEe-CCCCCeeE
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQRRPVLKVD-IPDVALSC  237 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~  237 (444)
                      ........                   .......+..+.+++...   .++.|...++. .........+- .+...+..
T Consensus       280 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~-~~~~~~w~~vi~~~~~~~~~  339 (430)
T d1qfma1         280 VKLIDNFE-------------------GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFT-DPEESKWKVLVPEHEKDVLE  339 (430)
T ss_dssp             EEEECSSS-------------------SCEEEEEEETTEEEEEECTTCTTCEEEEEETT-BCCGGGCEEEECCCSSCEEE
T ss_pred             eEeecccc-------------------cceEEEecCCceeecccCcccccceeEEecCC-CCccccceEEecccCcceee
Confidence            00111111                   112222233333444332   34677777776 22222223333 34444443


Q ss_pred             EEEccCCCEEEEEc-CCC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE-EEE---CCCcEEEEEcCCCceE
Q psy8152         238 ITTTNQSHYVIVGS-TTG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL-SVS---LDRHFRVHDFHSKKLL  310 (444)
Q Consensus       238 ~~~~~~~~~l~~~~-~dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~-s~~---~dg~i~vw~~~~~~~~  310 (444)
                      -.+...+.+|+... .++  .|+++++.. +.....+....+.|..+...+....+. +.+   .=.+++-+|+.++++.
T Consensus       340 ~~~~~~~~~lvl~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~~  418 (430)
T d1qfma1         340 WVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELE  418 (430)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCC
T ss_pred             eEEEEECCEEEEEEEcCCEeEEEEEECCC-CcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCcc
Confidence            34444455665543 444  588899887 666555444455666665555554333 222   1267888999887654

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.69  E-value=0.0091  Score=48.94  Aligned_cols=257  Identities=10%  Similarity=0.080  Sum_probs=152.2

Q ss_pred             CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE
Q psy8152          15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS   94 (444)
Q Consensus        15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s   94 (444)
                      ...|.|.|+.....+.+  +       .-.--+.-.+ |..+.||.-+ ..++.++|+++.+.++.+..   ...|.-+-
T Consensus        44 ~~~VvIidl~n~~~~~R--r-------pi~AdsAIMh-P~~~IiALra-g~~LQiFnletK~klks~~~---~e~VvfWk  109 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIR--R-------PISADSAIMN-PASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWK  109 (327)
T ss_dssp             EEEEEEEETTSTTSCEE--E-------ECCCSEEEEC-SSSSEEEEEE-TTEEEEEETTTTEEEEEEEC---SSCCCEEE
T ss_pred             CceEEEEECCCCCccee--c-------ccchhhhhcC-CCCcEEEEec-CCeEEEEehhHhhhhceEEc---CCCcEEEE
Confidence            34677777765542110  0       1111233455 6778877765 46899999999998888764   34555555


Q ss_pred             e-CCCeEEEEecCCcEEEEEcCCC-Ccccccccc----CCCeEEEEEeccCCEEEEeeC-------CCeEEEEEcCCcee
Q psy8152          95 R-YDECILTAVKSGDVKLWRYKTE-PDQWTNFNV----GPQLECMKHNKHSNIIATGGK-------ENDLKLWDLNTTKN  161 (444)
Q Consensus        95 ~-~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~vwd~~~~~~  161 (444)
                      + +.+.|+..+. ..|+-|++... .+.+.+..|    ...|..-..+++.++++..+-       .|.+.+|....+ .
T Consensus       110 Wis~~~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~  187 (327)
T d1utca2         110 WISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-V  187 (327)
T ss_dssp             ESSSSEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-E
T ss_pred             ecCCCEEEEEcC-CceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-c
Confidence            4 4455555544 48999999543 333333333    456777788888888875442       367889988753 3


Q ss_pred             eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cc--eEE--Ee-CC---C
Q psy8152         162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RP--VLK--VD-IP---D  232 (444)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~--~~~--~~-~~---~  232 (444)
                      .+.+.+|......+.+....    .+..+.|.+.-        +...++++|.++.....+ .+  ...  +. ..   .
T Consensus       188 sQ~ieGhaa~F~~~~~~g~~----~~~~lf~fa~r--------~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~  255 (327)
T d1utca2         188 SQPIEGHAASFAQFKMEGNA----EESTLFCFAVR--------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN  255 (327)
T ss_dssp             EEEECCSEEEEEEECCTTCS----SCEEEEEEEEE--------ETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTT
T ss_pred             CccccceeeeeEEEEcCCCC----CCceEEEEEEC--------CCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccC
Confidence            34455555533333332211    11123333331        223478999998732221 11  111  11 11   2


Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEE
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFR  300 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~  300 (444)
                      .-..++..++.-..++.-+.-|.|++||+.+ +.++..-+--..+|...+-+....-+++....|.|.
T Consensus       256 DFPvamqvs~kygiiyviTK~G~i~lyDleT-gt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         256 DFPVAMQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             CcEEEEEeeccCCEEEEEecCcEEEEEEccc-ccEEEEeecCCCceEEeccCCCCceEEEECCCCeEE
Confidence            3445788888888999999999999999999 998887665555665444444444455555666654

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.52  E-value=0.025  Score=52.35  Aligned_cols=115  Identities=12%  Similarity=0.088  Sum_probs=70.0

Q ss_pred             CcEEEEEEcCCeEEEEeCCCCccccceeeccc--c----ccE-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc--
Q psy8152          55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG--E----GDI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN--  125 (444)
Q Consensus        55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~--~----~~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--  125 (444)
                      +..|++++.++.|.-.|..+|+.+-.+.....  .    ..+ ..+...+..++.++.++.+.-.|..+++.++....  
T Consensus        68 ~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~t~~~~l~alda~tG~~~W~~~~~~  147 (582)
T d1flga_          68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD  147 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred             CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEeCCceEEecCCCeEEEecccccceeeeecccC
Confidence            45778888889999999999999877642210  0    000 12233456778889999999999999987752211  


Q ss_pred             cC--CCe--EEEEEec--cCCEEEEe-------eCCCeEEEEEcCCceeeeeeeccc
Q psy8152         126 VG--PQL--ECMKHNK--HSNIIATG-------GKENDLKLWDLNTTKNIFSAKNVS  169 (444)
Q Consensus       126 ~~--~~v--~~~~~~~--~~~~l~~~-------~~d~~i~vwd~~~~~~~~~~~~~~  169 (444)
                      +.  ...  .-+.+.+  ....++..       +..+.|.-+|.++++.+.++....
T Consensus       148 ~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~  204 (582)
T d1flga_         148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVE  204 (582)
T ss_dssp             GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESST
T ss_pred             CCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccC
Confidence            10  000  0111111  23333332       235679999999999888775543

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.50  E-value=0.0077  Score=52.63  Aligned_cols=226  Identities=10%  Similarity=-0.006  Sum_probs=110.1

Q ss_pred             CcccEEEecCC-CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC------CeEEEEeCCCCcc
Q psy8152           5 DDYNIYIGSST-GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG------QKIKIYDTDFKNF   77 (444)
Q Consensus         5 ~~~~l~~g~~d-g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~~~~~   77 (444)
                      ++.+++.|+.+ ..+.+||..+...     ..+........-.+++.. +++..++.|+..      ..+.+||..+.+.
T Consensus        86 ~g~i~v~Gg~~~~~~~~yd~~~~~w-----~~~~~~~~~r~~~~~~~~-~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W  159 (387)
T d1k3ia3          86 NGQIVVTGGNDAKKTSLYDSSSDSW-----IPGPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  159 (387)
T ss_dssp             TSCEEEECSSSTTCEEEEEGGGTEE-----EECCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             CCcEEEeecCCCcceeEecCccCcc-----cccccccccccccceeee-cCCceeeeccccccccccceeeeecCCCCce
Confidence            45566666544 6899999887763     223222222233445555 578888887653      4689999877653


Q ss_pred             ccceee-------ccc-------cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc------ccccCCC--eEEEEE
Q psy8152          78 NTNTDV-------SFG-------EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT------NFNVGPQ--LECMKH  135 (444)
Q Consensus        78 ~~~~~~-------~~~-------~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~------~~~~~~~--v~~~~~  135 (444)
                      ...-..       ..+       ........++++.++.+...+.+.+++..+......      ...+...  -.++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (387)
T d1k3ia3         160 TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMY  239 (387)
T ss_dssp             EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEE
T ss_pred             eecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEe
Confidence            221000       000       111122235667777776666666766655433210      0001111  122333


Q ss_pred             ec-cCCEEEEeeCCC--------eEEEEEcCC---ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152         136 NK-HSNIIATGGKEN--------DLKLWDLNT---TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA  203 (444)
Q Consensus       136 ~~-~~~~l~~~~~d~--------~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  203 (444)
                      .. ++++++.|+...        ...+.++..   ........  ..             +..+..-.+....+++++++
T Consensus       240 ~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------~p~~r~~~~~~~~~dg~i~v  304 (387)
T d1k3ia3         240 DAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS--NG-------------LYFARTFHTSVVLPDGSTFI  304 (387)
T ss_dssp             ETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT--TC-------------CSSCCBSCEEEECTTSCEEE
T ss_pred             eccCCceEEEEeccCCCCCcccceeecccccccccCCCceeec--cc-------------cccccccceeeeccCCeEEE
Confidence            32 566677666421        122222221   10000000  00             00111233556668899999


Q ss_pred             EEeCCc-----------eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcC
Q psy8152         204 VCSKQG-----------YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGST  252 (444)
Q Consensus       204 ~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  252 (444)
                      .|+.+.           ++.+||.. ......+..+......-....+.++|+.|+.|+.
T Consensus       305 ~GG~~~~~~~~~~~~~~~ve~Ydp~-~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         305 TGGQRRGIPFEDSTPVFTPEIYVPE-QDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             ECCBSBCCTTCCCSBCCCCEEEEGG-GTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             ECCcccCccCCCCcEeceEEEEECC-CCeEEECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence            887531           47889987 2222222211111111123446789999999874

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.019  Score=47.15  Aligned_cols=230  Identities=8%  Similarity=-0.058  Sum_probs=129.0

Q ss_pred             EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEe-cCCcEEEEEcCCCC----ccccccccCCC
Q psy8152          57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAV-KSGDVKLWRYKTEP----DQWTNFNVGPQ  129 (444)
Q Consensus        57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~-~dg~i~iw~~~~~~----~~~~~~~~~~~  129 (444)
                      +|+.+.. ..|+..++.+......+.   ....+.++  .+..++|.-+. ..+.|+-.++....    ...........
T Consensus         3 fLl~s~~-~~I~~~~l~~~~~~~~~~---~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~   78 (266)
T d1ijqa1           3 YLFFTNR-HEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA   78 (266)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             EEEEECC-CeEEEEECCCCcceeeeC---CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCC
Confidence            3444443 458888887655444332   23344455  44556655543 45667666654321    11112222345


Q ss_pred             eEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--
Q psy8152         130 LECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--  206 (444)
Q Consensus       130 v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--  206 (444)
                      +..+++.+.+ ++..+-...+.|.+.++........+.....                  ....++++|...+|....  
T Consensus        79 p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~------------------~P~~l~vd~~~g~ly~~~~~  140 (266)
T d1ijqa1          79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDWG  140 (266)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC------------------CEEEEEEETTTTEEEEEECS
T ss_pred             cceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCC------------------CcceEEEEcccCeEEEeccC
Confidence            6788988744 4444545677899999886554433333222                  478899998766665443  


Q ss_pred             CCceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEecc--ccCceeEEE
Q psy8152         207 KQGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKG--FAGCVKDIA  282 (444)
Q Consensus       207 ~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~--h~~~i~~~~  282 (444)
                      ..+.|...++.    +.....+ ...-.....+++.+.++.|+.+ ...+.|...++.. ......+..  ......+|+
T Consensus       141 ~~~~I~r~~~d----Gs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG-~~~~~~~~~~~~~~~p~~la  215 (266)
T d1ijqa1         141 TPAKIKKGGLN----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLA  215 (266)
T ss_dssp             SSCEEEEEETT----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEE
T ss_pred             CCcceeEeccC----CCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCC-CCEEEEEeCCCcccccEEEE
Confidence            34567667766    2222222 2233456899999877666554 6678898889865 333222222  223455677


Q ss_pred             ecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152         283 CPLNENLILSVSLDRHFRVHDFHSKKLLRKDY  314 (444)
Q Consensus       283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~  314 (444)
                      +. .+.++.+-..++.|+..+..+++....+.
T Consensus       216 v~-~~~ly~td~~~~~I~~~~~~~g~~~~~~~  246 (266)
T d1ijqa1         216 VF-EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (266)
T ss_dssp             EE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             EE-CCEEEEEECCCCeEEEEECCCCcceEEEE
Confidence            75 33444444466788888877776554443

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.037  Score=45.72  Aligned_cols=56  Identities=9%  Similarity=0.061  Sum_probs=30.6

Q ss_pred             CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec---------CCcEEEEEcCCCCcc
Q psy8152          65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK---------SGDVKLWRYKTEPDQ  120 (444)
Q Consensus        65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~---------dg~i~iw~~~~~~~~  120 (444)
                      ..|.+||+.+++....-.++........+..++.+++.|+.         -..+.+||..+.+..
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~   83 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS   83 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred             ceEEEEECCCCeEEECCCCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhccccccccc
Confidence            46889999887654432222222222233445666666653         135677887665443

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.89  E-value=0.1  Score=44.32  Aligned_cols=196  Identities=10%  Similarity=0.143  Sum_probs=113.4

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE------EeCCC--eEEEEec-C---CcEEEEEcCCCC-c
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV------SRYDE--CILTAVK-S---GDVKLWRYKTEP-D  119 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~------s~~~~--~l~~~~~-d---g~i~iw~~~~~~-~  119 (444)
                      |...+++.....+-|++|+++ |+.+..+.    .+.+..+      ...++  -|++++. +   .+|.+|.+.... .
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~----~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~  112 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYH----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT  112 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEECC----SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEecc----cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence            355677777777779999996 77776653    2233222      22332  2455543 2   357788775322 1


Q ss_pred             cccccc-------cCCCeEEEEE--ec-cCC-EEEEeeCCCeEEEEEcCC---ce----eeeeeecccceeeEeeeCCCc
Q psy8152         120 QWTNFN-------VGPQLECMKH--NK-HSN-IIATGGKENDLKLWDLNT---TK----NIFSAKNVSHRVLVYSVKPDE  181 (444)
Q Consensus       120 ~~~~~~-------~~~~v~~~~~--~~-~~~-~l~~~~~d~~i~vwd~~~---~~----~~~~~~~~~~~~~~~~~~~~~  181 (444)
                      +..+..       -...++.+|+  ++ ++. ++++...+|.+..|.+..   +.    .+..+....            
T Consensus       113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~------------  180 (353)
T d1h6la_         113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNS------------  180 (353)
T ss_dssp             EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSS------------
T ss_pred             cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCC------------
Confidence            111111       1224667777  55 454 456677789998887742   22    233332222            


Q ss_pred             ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC--CCccceEEEeC--CCCCeeEEEEcc----CCCEEEEEcCC
Q psy8152         182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT--TQRRPVLKVDI--PDVALSCITTTN----QSHYVIVGSTT  253 (444)
Q Consensus       182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~--~~~~i~~~~~~~----~~~~l~~~~~d  253 (444)
                             .+..|.+.+....|+.+-++.-|+.++....  .....+....+  ....+..|++-.    +|-+|++.-.+
T Consensus       181 -------q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~  253 (353)
T d1h6la_         181 -------QTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGN  253 (353)
T ss_dssp             -------CEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred             -------ccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCC
Confidence                   4889999998899999988877777766511  11122222212  245567777543    24445555567


Q ss_pred             CcEEEEEcCCCCcceeEec
Q psy8152         254 GDMMAVDLRGKGKPCYKYK  272 (444)
Q Consensus       254 g~i~iwd~~~~~~~~~~~~  272 (444)
                      ++..|||...+.+.+..|.
T Consensus       254 n~f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         254 SSYAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             TEEEEEESSTTCCEEEEEE
T ss_pred             CeEEEEecCCCccccceEE
Confidence            8899999887456666664

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.14  Score=42.01  Aligned_cols=217  Identities=12%  Similarity=0.021  Sum_probs=95.7

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc---------CCeEEEEeCCCCccccceeeccc
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS---------GQKIKIYDTDFKNFNTNTDVSFG   86 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---------d~~i~vw~~~~~~~~~~~~~~~~   86 (444)
                      ..+.+||+.+++-     ..+..+.....=.+++..  ++..++.|+.         -..+.+||..+......-..+..
T Consensus        19 ~~~~~yd~~t~~W-----~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~   91 (288)
T d1zgka1          19 SYLEAYNPSNGTW-----LRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP   91 (288)
T ss_dssp             CCEEEEETTTTEE-----EECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC
T ss_pred             ceEEEEECCCCeE-----EECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccce
Confidence            3577899888762     222222111111222333  3556666553         24677888776555433221111


Q ss_pred             cccEEEEEeCCCeEEEEecCCc-----EEEEEcCCCCccccccccCCCe--EEEEEeccCCEEEEeeCC-----CeEEEE
Q psy8152          87 EGDIVGVSRYDECILTAVKSGD-----VKLWRYKTEPDQWTNFNVGPQL--ECMKHNKHSNIIATGGKE-----NDLKLW  154 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d-----~~i~vw  154 (444)
                      .....+...++++++.++..+.     +..++..+..... ........  .++... ...+++.|+.+     ..+..|
T Consensus        92 r~~~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~  169 (288)
T d1zgka1          92 RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHL-VAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECY  169 (288)
T ss_dssp             CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEE
T ss_pred             ecceeccccceeeEEecceecccccceeeeeccccCcccc-ccccccccccceeeee-eecceEecCcccccccceEEEe
Confidence            1112233346666666654443     3445555443321 11111111  112222 45566666543     346677


Q ss_pred             EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcCCCCCccceEEEe
Q psy8152         155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPKITTQRRPVLKVD  229 (444)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~  229 (444)
                      |..+.+.... .....                .....+++.. .+++++.++.+     ..+..+|..   .......-.
T Consensus       170 d~~~~~~~~~-~~~~~----------------~~~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~---~~~~~~~~~  228 (288)
T d1zgka1         170 YPERNEWRMI-TAMNT----------------IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVE---TETWTFVAP  228 (288)
T ss_dssp             ETTTTEEEEC-CCCSS----------------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETT---TTEEEECCC
T ss_pred             eccccccccc-ccccc----------------ccccccccce-eeeEEEecCccccccccceeeeeec---ceeeecccC
Confidence            7765443211 11110                0011223332 34555665443     356677776   222111101


Q ss_pred             CCCCCe-eEEEEccCCCEEEEEcCCCc-----EEEEEcCC
Q psy8152         230 IPDVAL-SCITTTNQSHYVIVGSTTGD-----MMAVDLRG  263 (444)
Q Consensus       230 ~~~~~i-~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~  263 (444)
                      ...... .+++. .++++++.|+.++.     |.+||+.+
T Consensus       229 ~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~  267 (288)
T d1zgka1         229 MKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT  267 (288)
T ss_dssp             CSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             ccCcccceEEEE-ECCEEEEEecCCCCeecceEEEEECCC
Confidence            111111 22333 36778888776543     77888886

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.36  E-value=0.16  Score=43.49  Aligned_cols=186  Identities=13%  Similarity=0.068  Sum_probs=101.2

Q ss_pred             cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-------ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcC
Q psy8152          43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-------NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK  115 (444)
Q Consensus        43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-------~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~  115 (444)
                      ....-++.+ +...+|++|+.+ .++|..+..-       .....+.....-..|..++.++..|+.. ..+.+..++..
T Consensus        37 ~~~~LLAVs-n~~GLl~aa~~~-~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d~l~v~-~~~~l~~~~~~  113 (381)
T d1xipa_          37 ASLQNLDIS-NSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVS-TRNALYSLDLE  113 (381)
T ss_dssp             SCCBCEEEE-TTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred             cccceEEEe-CCCCEEEEECCC-EEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCCEEEEE-eCCCEEEEEee
Confidence            456678888 667788888876 4667653211       0001111111123466667777776665 44567777766


Q ss_pred             CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152         116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF  195 (444)
Q Consensus       116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  195 (444)
                      .-...........++..+.++|.  .++....++.+.++.+..++......+    +..+..+         ..+.+++|
T Consensus       114 ~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~----v~~~~~~---------~~~~~v~w  178 (381)
T d1xipa_         114 ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQN----VTSFDVT---------NSQLAVLL  178 (381)
T ss_dssp             STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEES----EEEEEEC---------SSEEEEEE
T ss_pred             ccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCC----cceEEec---------CCceEEEE
Confidence            54333222234556788887764  566666789999999988654322211    1111211         24788888


Q ss_pred             ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152         196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV  249 (444)
Q Consensus       196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  249 (444)
                      ++.++.++++..++.-.--++.   ....+.........+.+|.|-.+..++++
T Consensus       179 s~kgkq~v~~~g~~~q~k~~i~---~~~~~~~p~~~~~~v~sI~WL~~~~F~vv  229 (381)
T d1xipa_         179 KDRSFQSFAWRNGEMEKQFEFS---LPSELEELPVEEYSPLSVTILSPQDFLAV  229 (381)
T ss_dssp             TTSCEEEEEEETTEEEEEEEEC---CCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             eCCcEEEEEeCCCceeeccCCC---CccccCCCcCCCcceeEEEEecCceEEEE
Confidence            8888777776443211111222   11111111122345788889866666554

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.03  E-value=0.21  Score=42.23  Aligned_cols=99  Identities=15%  Similarity=0.103  Sum_probs=57.6

Q ss_pred             ceeEEEEecCCCEEEEEeC-----------------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE-E
Q psy8152         189 WVNGISFLPNSDKVAVCSK-----------------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV-G  250 (444)
Q Consensus       189 ~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~  250 (444)
                      ..+.+++..++.+++|-..                 -+.+..|+..   ..+.+   ...-...+.|+++|++++|++ -
T Consensus       151 ~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~---~~~~~---~~~l~~pNGI~~s~d~~~lyVa~  224 (340)
T d1v04a_         151 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---DVRVV---AEGFDFANGINISPDGKYVYIAE  224 (340)
T ss_dssp             SEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS---CEEEE---EEEESSEEEEEECTTSSEEEEEE
T ss_pred             CccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC---ceEEE---cCCCCccceeEECCCCCEEEEEe
Confidence            4788999888888887311                 2334444433   22222   122234689999999887665 5


Q ss_pred             cCCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEEE
Q psy8152         251 STTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       251 ~~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      +..+.|++|++.. ...+....  .-.+..-.+.+.+.+..+..++
T Consensus       225 t~~~~i~~y~~~~-~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         225 LLAHKIHVYEKHA-NWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             GGGTEEEEEEECT-TSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             CCCCeEEEEEeCC-CcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            6677899999876 43332221  1234456677776443344444

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=95.58  E-value=0.45  Score=38.65  Aligned_cols=221  Identities=11%  Similarity=0.036  Sum_probs=110.8

Q ss_pred             cccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeee
Q psy8152          87 EGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSA  165 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~  165 (444)
                      ...|..++--..+.+.-. +|.|..|-....-.+..-......|..++.-. ...++.  .++.+..|.... ++.....
T Consensus        25 ~~~i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~-~~~~al--~dg~v~~wG~~~~gq~~~~~  100 (273)
T d1jtdb_          25 QSGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-YHSLAL--KDGEVIAWGGNEDGQTTVPA  100 (273)
T ss_dssp             SSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECS-SEEEEE--ETTEEEEEECCTTSTTCCCG
T ss_pred             CCCcEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCC-Cceeee--eeeeeeccCCCcceeecccc
Confidence            456788876555555444 89999998665443332222334455555422 222332  478999997644 2211110


Q ss_pred             ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152         166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH  245 (444)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  245 (444)
                      ..                   ...+..++....  ..+. -.|+.+..|...   ..............|..++-  ...
T Consensus       101 ~~-------------------~~~~~~i~~~~~--~~~~-~~dg~v~~~g~~---~~~~~~~~~~~~~~v~~~~~--~~~  153 (273)
T d1jtdb_         101 EA-------------------RSGVDAIAAGAW--ASYA-LKDGKVIAWGDD---SDGQTTVPAEAQSGVTALDG--GVY  153 (273)
T ss_dssp             GG-------------------GSSCCEEEEETT--EEEE-EETTEEEEEECC---TTSTTSCCGGGGSSEEEEEE--CSS
T ss_pred             cc-------------------ccceeEEeeecc--cccc-cccccceecccC---CCCceeeeccCCceEEEEec--cce
Confidence            11                   112445554332  2222 247899999755   11111111111223444433  222


Q ss_pred             EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC-CceEEEeecCCceeEEEE
Q psy8152         246 YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS-KKLLRKDYMQSRLTSILV  324 (444)
Q Consensus       246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~-~~~~~~~~~~~~i~~~~~  324 (444)
                      .++ ...++.++.|-... ..++.........|..|+.... ..++ -. ||.|+.|-... +++-........|..++-
T Consensus       154 ~~~-~~~~g~~~~~G~~~-~g~~~~~~~~~~~v~~Is~G~~-h~~~-l~-dG~v~~WG~n~~Gql~~~~~~~~~v~~I~~  228 (273)
T d1jtdb_         154 TAL-AVKNGGVIAWGDNY-FGQTTVPAEAQSGVDDVAGGIF-HSLA-LK-DGKVIAWGDNRYKQTTVPTEALSGVSAIAS  228 (273)
T ss_dssp             EEE-EEETTEEEEEECCT-TSTTSCCGGGSSSEEEEEECSS-EEEE-EE-TTEEEEEECCTTSTTCCCGGGGSSCCEEEE
T ss_pred             eee-eecccceeEeeccc-CCcccccccccCCccceeccce-eeEE-Ee-cCcEEEcCCCCCCccCCCccCCCCcEEEEe
Confidence            333 33478889997665 3333222234557888876432 2233 23 89999997644 333222223345666664


Q ss_pred             cCCCcccccchhhhhccccccCCCccccCCC
Q psy8152         325 RSDFSLENETKKEEQEHSEEKGDSDEKYDPE  355 (444)
Q Consensus       325 ~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~  355 (444)
                      ...+.          ++.  .|+.|..|-..
T Consensus       229 G~~~~----------~~l--~~g~v~~WG~~  247 (273)
T d1jtdb_         229 GEWYS----------LAL--KNGKVIAWGSS  247 (273)
T ss_dssp             CSSCE----------EEE--ETTEEEEESTT
T ss_pred             CcceE----------EEE--ECCEEEEECCC
Confidence            43322          222  36889999644

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.57  E-value=0.58  Score=39.90  Aligned_cols=179  Identities=8%  Similarity=0.000  Sum_probs=100.3

Q ss_pred             cccEEEEEeCCCeEEEEecCCcEEEEEcCC----------CCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152          87 EGDIVGVSRYDECILTAVKSGDVKLWRYKT----------EPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL  156 (444)
Q Consensus        87 ~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~  156 (444)
                      .....+++....++++|+.+ .+.|..+..          +... .....-..|..++|+-  ..|+... ++.+..++.
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~-~l~V~~t~~l~~~~~~~~~~~~~-~~~~~ip~v~~vafs~--d~l~v~~-~~~l~~~~~  112 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTF-KWEKEIPDVIFVCFHG--DQVLVST-RNALYSLDL  112 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCC-SEEEECTTEEEEEEET--TEEEEEE-SSEEEEEES
T ss_pred             ccceEEEeCCCCEEEEECCC-EEEEEEHHHHHHHhhccCCCCcc-eeccCCCCeEEEEeeC--CEEEEEe-CCCEEEEEe
Confidence            45567777777788877777 466766421          1111 1111223588889964  3455543 466888887


Q ss_pred             CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE----EEeCCC
Q psy8152         157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL----KVDIPD  232 (444)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~  232 (444)
                      ..-...........                  ++.++.++|  ..++....++.+.++.+. .....++.    .+. -.
T Consensus       113 ~~l~~~~~~~~~~~------------------~~~~~~~~p--~~~~l~~~~~~~~~~~l~-~~~~~~~~~~v~~~~-~~  170 (381)
T d1xipa_         113 EELSEFRTVTSFEK------------------PVFQLKNVN--NTLVILNSVNDLSALDLR-TKSTKQLAQNVTSFD-VT  170 (381)
T ss_dssp             SSTTCEEEEEECSS------------------CEEEEEECS--SEEEEEETTSEEEEEETT-TCCEEEEEESEEEEE-EC
T ss_pred             eccccccccccccc------------------cccceecCC--ceeEEEecCCCEEEEEec-cCccccccCCcceEE-ec
Confidence            76433333222222                  577888877  457777788999999998 22222221    111 13


Q ss_pred             CCeeEEEEccCCCEEEEEcCCCcEEE-EEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE
Q psy8152         233 VALSCITTTNQSHYVIVGSTTGDMMA-VDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS  294 (444)
Q Consensus       233 ~~i~~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~  294 (444)
                      ..+.+++|++.|..++++..++ ..+ -++.. ...+.........|.+|.|-.+..++++-+
T Consensus       171 ~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~-~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~  231 (381)
T d1xipa_         171 NSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSL-PSELEELPVEEYSPLSVTILSPQDFLAVFG  231 (381)
T ss_dssp             SSEEEEEETTSCEEEEEEETTE-EEEEEEECC-CHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             CCceEEEEeCCcEEEEEeCCCc-eeeccCCCC-ccccCCCcCCCcceeEEEEecCceEEEEEC
Confidence            5578888888888887763322 211 12222 111111112344678899987666666543

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.52  E-value=0.57  Score=39.47  Aligned_cols=205  Identities=10%  Similarity=0.147  Sum_probs=115.9

Q ss_pred             eCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec------cCCEEEEeeC--C--CeEEEEEcCC-ceeee
Q psy8152          95 RYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK------HSNIIATGGK--E--NDLKLWDLNT-TKNIF  163 (444)
Q Consensus        95 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~--d--~~i~vwd~~~-~~~~~  163 (444)
                      |...+++.....+-|++||+. |+.+..+  ..+.++.+..-.      ....|+.++.  +  .+|.+|.+.. ...+.
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~--~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~  114 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSY--HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEEC--CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEec--ccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence            345677777777779999996 6655422  235666665432      2223455552  2  3677887753 22232


Q ss_pred             eeecccceeeEeeeCCCcccccCccceeEEEE--ecC-CC-EEEEEeCCceEEEEEcCCCCC----ccceEEEeCCCCCe
Q psy8152         164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF--LPN-SD-KVAVCSKQGYVRVYDPKITTQ----RRPVLKVDIPDVAL  235 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~~-~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~~~~i  235 (444)
                      .+.......           ......++.+|+  +|. +. ++++....|.+..|.+.....    .+.++++.. ...+
T Consensus       115 ~~~~~~~p~-----------~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~-~~q~  182 (353)
T d1h6la_         115 SITDPNRPI-----------ASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKM-NSQT  182 (353)
T ss_dssp             ECSCSSSCE-----------ECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEEC-SSCE
T ss_pred             ccccccccc-----------ccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCC-CCcc
Confidence            222111100           000113666776  554 33 566777899999988751112    234445543 3458


Q ss_pred             eEEEEccCCCEEEEEcCCCcEEEEEcCCC----CcceeEecc--ccCceeEEEecC--CCC-EEE-EEECCCcEEEEEcC
Q psy8152         236 SCITTTNQSHYVIVGSTTGDMMAVDLRGK----GKPCYKYKG--FAGCVKDIACPL--NEN-LIL-SVSLDRHFRVHDFH  305 (444)
Q Consensus       236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~--h~~~i~~~~~s~--~~~-~l~-s~~~dg~i~vw~~~  305 (444)
                      ..|.+.+....|+.+-.+.-|..+++...    ...+....+  ....+-.|++-.  ++. ||+ |.-.+.+..||+..
T Consensus       183 EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~  262 (353)
T d1h6la_         183 EGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQ  262 (353)
T ss_dssp             EEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             ceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecC
Confidence            88999998889999988776666665421    122222222  345677776542  333 444 44467889999987


Q ss_pred             C-CceEEEee
Q psy8152         306 S-KKLLRKDY  314 (444)
Q Consensus       306 ~-~~~~~~~~  314 (444)
                      + .+.+..+.
T Consensus       263 ~~~~~~g~F~  272 (353)
T d1h6la_         263 GQNKYVADFQ  272 (353)
T ss_dssp             TTCCEEEEEE
T ss_pred             CCccccceEE
Confidence            6 46665543

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=93.70  E-value=1.4  Score=35.56  Aligned_cols=223  Identities=10%  Similarity=0.010  Sum_probs=107.8

Q ss_pred             ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152          42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW  121 (444)
Q Consensus        42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~  121 (444)
                      ...|..|+--  ....++ -. ||.|+.|-....-.+-.-.  .....+..++....+.+. -.++.+..|.....-...
T Consensus        25 ~~~i~~va~G--~~h~~a-l~-dG~v~~wG~N~~GQlG~~~--~~~~~v~~v~~G~~~~~a-l~dg~v~~wG~~~~gq~~   97 (273)
T d1jtdb_          25 QSGVDAIAGG--YFHGLA-LK-GGKVLGWGANLNGQLTMPA--ATQSGVDAIAAGNYHSLA-LKDGEVIAWGGNEDGQTT   97 (273)
T ss_dssp             SSSEEEEEEC--SSEEEE-EE-TTEEEEEECCTTSTTSCCG--GGGSCCCEEEECSSEEEE-EETTEEEEEECCTTSTTC
T ss_pred             CCCcEEEEcc--CCEEEE-EE-CCEEEEEeCCCCCceeeee--cccccceEEecCCCceee-eeeeeeeccCCCcceeec
Confidence            4567888765  233333 34 8999999754332222111  123445566554444333 348999999864332221


Q ss_pred             cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152         122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK  201 (444)
Q Consensus       122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  201 (444)
                      ........+..++....  ..+. -.|+.+..|.-.............                  ..|..++-.  ...
T Consensus        98 ~~~~~~~~~~~i~~~~~--~~~~-~~dg~v~~~g~~~~~~~~~~~~~~------------------~~v~~~~~~--~~~  154 (273)
T d1jtdb_          98 VPAEARSGVDAIAAGAW--ASYA-LKDGKVIAWGDDSDGQTTVPAEAQ------------------SGVTALDGG--VYT  154 (273)
T ss_dssp             CCGGGGSSCCEEEEETT--EEEE-EETTEEEEEECCTTSTTSCCGGGG------------------SSEEEEEEC--SSE
T ss_pred             cccccccceeEEeeecc--cccc-cccccceecccCCCCceeeeccCC------------------ceEEEEecc--cee
Confidence            11222233445544322  2222 247888888754322111110111                  124444332  123


Q ss_pred             EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE
Q psy8152         202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI  281 (444)
Q Consensus       202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~  281 (444)
                      ++ ...++.++.|-..   ...+..........|..|+....  +.+.- .||.|+.|=....++ +..-......|..|
T Consensus       155 ~~-~~~~g~~~~~G~~---~~g~~~~~~~~~~~v~~Is~G~~--h~~~l-~dG~v~~WG~n~~Gq-l~~~~~~~~~v~~I  226 (273)
T d1jtdb_         155 AL-AVKNGGVIAWGDN---YFGQTTVPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQ-TTVPTEALSGVSAI  226 (273)
T ss_dssp             EE-EEETTEEEEEECC---TTSTTSCCGGGSSSEEEEEECSS--EEEEE-ETTEEEEEECCTTST-TCCCGGGGSSCCEE
T ss_pred             ee-eecccceeEeecc---cCCcccccccccCCccceeccce--eeEEE-ecCcEEEcCCCCCCc-cCCCccCCCCcEEE
Confidence            33 3347788888765   21111111123345777766432  32222 379999997654222 22212223457777


Q ss_pred             EecCCCCEEEEEECCCcEEEEEcC
Q psy8152         282 ACPLNENLILSVSLDRHFRVHDFH  305 (444)
Q Consensus       282 ~~s~~~~~l~s~~~dg~i~vw~~~  305 (444)
                      +.... ..++.  .||.|+.|-..
T Consensus       227 ~~G~~-~~~~l--~~g~v~~WG~~  247 (273)
T d1jtdb_         227 ASGEW-YSLAL--KNGKVIAWGSS  247 (273)
T ss_dssp             EECSS-CEEEE--ETTEEEEESTT
T ss_pred             EeCcc-eEEEE--ECCEEEEECCC
Confidence            65432 33443  38999999644

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.15  E-value=1.9  Score=35.67  Aligned_cols=245  Identities=13%  Similarity=0.065  Sum_probs=132.2

Q ss_pred             CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEe---CCC------
Q psy8152           4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYD---TDF------   74 (444)
Q Consensus         4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~---~~~------   74 (444)
                      ++...+++-+.+|.|+-..+...+.  .....+.. .-.+.+..+... .....|+.-+..|.++.-.   +..      
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~--~~~~~~~~-k~~D~v~~~~~~-~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~   78 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAA--SNGQDFAM-KDTDRLLAMLEM-NTKDVLLLFTNKGNYLYCPVHELPDIRWKDL   78 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHH--TTTCCCCC-CTTCCEEEEEEE-ETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhh--cCCCCCcc-cCCceEEEEEEE-cCCCEEEEEecCCEEEEEeeccCcccccccc
Confidence            3557788899999999776643211  00011111 123455555554 3456666666667766544   432      


Q ss_pred             CccccceeeccccccEEEEE-----eCCCeEEEEecCCcEEEEEcCCCCc-------cccccccCCCeEEEEEeccCCEE
Q psy8152          75 KNFNTNTDVSFGEGDIVGVS-----RYDECILTAVKSGDVKLWRYKTEPD-------QWTNFNVGPQLECMKHNKHSNII  142 (444)
Q Consensus        75 ~~~~~~~~~~~~~~~v~~~s-----~~~~~l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l  142 (444)
                      |..+..+-.......+..+.     +...+|+..+..|.++...+.....       ......-...+..+........+
T Consensus        79 G~pi~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i  158 (323)
T d1wp5a_          79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL  158 (323)
T ss_dssp             CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred             cccceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEE
Confidence            33333221112233444432     2357899999999999998653221       11233456677777777777788


Q ss_pred             EEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE-EecCCCEEEEEeCCceEEEEEcCC---
Q psy8152         143 ATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS-FLPNSDKVAVCSKQGYVRVYDPKI---  218 (444)
Q Consensus       143 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~~~~~d~~i~i~d~~~---  218 (444)
                      +.++..|.+..|+...-...   ......+..+.+.+       ...|.++. ..+++..|++.+..|..+...+..   
T Consensus       159 ~l~t~~G~~lrf~~~~vr~~---gr~a~GV~~ikL~~-------~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~  228 (323)
T d1wp5a_         159 FLVTHNGYALWFDESEVSIV---GVRAAGVKGMNLKE-------GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEK  228 (323)
T ss_dssp             EEEETTSEEEEEEGGGSCBC---CSSCCCEECCCCCT-------TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCC
T ss_pred             EEEEecceeeEeeccccccc---Cccccccccccccc-------ccccchhhhccccccceeeeeeeheeecccchhhcc
Confidence            88899999999987642221   11112222233322       22455444 445567888899999888876551   


Q ss_pred             -CCCccceEEEe---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152         219 -TTQRRPVLKVD---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR  262 (444)
Q Consensus       219 -~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  262 (444)
                       ....+-+..+.   .....+..+....+...|+..+..|.+.-.++.
T Consensus       229 ~~RggkGv~~~k~~k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~~  276 (323)
T d1wp5a_         229 ATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG  276 (323)
T ss_dssp             CCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred             ccccccccccccccccccceeeeeEecCCCCEEEEEeCCCEEEEEEhh
Confidence             01111122221   122334444444445556666666666555544

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.38  E-value=2.6  Score=35.18  Aligned_cols=184  Identities=13%  Similarity=0.107  Sum_probs=95.9

Q ss_pred             EEEeeeccCCcEEEEEEc------------CCeEEEEeCCCCcccc-ceeecccc-----ccEEEE----EeCCCe-EEE
Q psy8152          46 LALNWGNVEESELLIAYS------------GQKIKIYDTDFKNFNT-NTDVSFGE-----GDIVGV----SRYDEC-ILT  102 (444)
Q Consensus        46 ~~~~~~~~~~~~l~~~~~------------d~~i~vw~~~~~~~~~-~~~~~~~~-----~~v~~~----s~~~~~-l~~  102 (444)
                      -.|+.. |++..+++++.            .|.|.++|+.+..... .+...+..     -.-..+    ..++.. |++
T Consensus        38 EDi~~~-~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          38 EDLEIL-PNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CEEEEC-TTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             ceEEEC-CCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            457777 67776666532            3899999987654322 22111110     011222    235553 444


Q ss_pred             Ee---cCCcEEEEEcCCCCcccccc---c--cCCCeEEEEEeccCCEEEEee--C-------------CCeEEEEEcCCc
Q psy8152         103 AV---KSGDVKLWRYKTEPDQWTNF---N--VGPQLECMKHNKHSNIIATGG--K-------------ENDLKLWDLNTT  159 (444)
Q Consensus       103 ~~---~dg~i~iw~~~~~~~~~~~~---~--~~~~v~~~~~~~~~~~l~~~~--~-------------d~~i~vwd~~~~  159 (444)
                      ..   ...+|-+|++..........   .  .....+.+++..++.+++|-.  .             -+...+|....+
T Consensus       117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~  196 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN  196 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS
T ss_pred             EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC
Confidence            43   34678888876443211111   1  234478888888888777721  1             022233333333


Q ss_pred             eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152         160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI  238 (444)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~  238 (444)
                      +.........                   ..+.|+++|++++|++ -+..++|+.|++...........+. -....-.+
T Consensus       197 ~~~~~~~~l~-------------------~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~-l~~~pDNi  256 (340)
T d1v04a_         197 DVRVVAEGFD-------------------FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNI  256 (340)
T ss_dssp             CEEEEEEEES-------------------SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEE
T ss_pred             ceEEEcCCCC-------------------ccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEec-CCCCCCcc
Confidence            2222222212                   4789999999976654 4667899999998222222222222 23445667


Q ss_pred             EEcc-CCCEEEEE
Q psy8152         239 TTTN-QSHYVIVG  250 (444)
Q Consensus       239 ~~~~-~~~~l~~~  250 (444)
                      .+.+ +|.+.+++
T Consensus       257 ~~d~~~g~lwva~  269 (340)
T d1v04a_         257 SVDPVTGDLWVGC  269 (340)
T ss_dssp             EECTTTCCEEEEE
T ss_pred             EEecCCCEEEEEE
Confidence            7765 44444443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.82  E-value=3.6  Score=35.57  Aligned_cols=221  Identities=10%  Similarity=0.034  Sum_probs=102.4

Q ss_pred             CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC----------------CeEEEEeCCCCcccc
Q psy8152          16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG----------------QKIKIYDTDFKNFNT   79 (444)
Q Consensus        16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d----------------~~i~vw~~~~~~~~~   79 (444)
                      -.|+++|+.+++.....+.       ......++|. +++..|+....+                ..|..|.+.+.....
T Consensus       151 ~~l~v~Dl~tg~~~~~~i~-------~~~~~~~~W~-~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d  222 (430)
T d1qfma1         151 VTIKFMKVDGAKELPDVLE-------RVKFSCMAWT-HDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED  222 (430)
T ss_dssp             EEEEEEETTTTEEEEEEEE-------EECSCCEEEC-TTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC
T ss_pred             heeEEeccCcceecccccc-------cccccceEEc-CCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCcccc
Confidence            4688889888874211111       1223568899 688877654332                367788877654433


Q ss_pred             ceeecc--ccccEE--EEEeCCCeEEEEec---CCcEEEE--EcCCCCccc-------cccccCCCeEEEEEeccCCEEE
Q psy8152          80 NTDVSF--GEGDIV--GVSRYDECILTAVK---SGDVKLW--RYKTEPDQW-------TNFNVGPQLECMKHNKHSNIIA  143 (444)
Q Consensus        80 ~~~~~~--~~~~v~--~~s~~~~~l~~~~~---dg~i~iw--~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~  143 (444)
                      .+....  ....+.  .++.++++++....   .....+|  ++.......       .+............+..+.+++
T Consensus       223 ~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (430)
T d1qfma1         223 ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTF  302 (430)
T ss_dssp             EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEE
T ss_pred             ccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecccccceEEEecCCceeec
Confidence            322222  222333  34678888664432   2333444  443321110       1111111112222222222333


Q ss_pred             Eee---CCCeEEEEEcCCcee--eeeee-cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCC--ceEEEE
Q psy8152         144 TGG---KENDLKLWDLNTTKN--IFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQ--GYVRVY  214 (444)
Q Consensus       144 ~~~---~d~~i~vwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d--~~i~i~  214 (444)
                      ...   .++.|...++.....  ...+- .+..                  .+..-.+...+.+|+.. ..+  ..|+++
T Consensus       303 ~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~------------------~~~~~~~~~~~~~lvl~~~~~~~~~l~v~  364 (430)
T d1qfma1         303 KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK------------------DVLEWVACVRSNFLVLCYLHDVKNTLQLH  364 (430)
T ss_dssp             EECTTCTTCEEEEEETTBCCGGGCEEEECCCSS------------------CEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred             ccCcccccceeEEecCCCCccccceEEecccCc------------------ceeeeEEEEECCEEEEEEEcCCEeEEEEE
Confidence            222   235566666554221  01111 1111                  23333333444555544 344  368889


Q ss_pred             EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc----CCCcEEEEEcCCCCc
Q psy8152         215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS----TTGDMMAVDLRGKGK  266 (444)
Q Consensus       215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~  266 (444)
                      ++.   .......+....+.+..+...+....+...-    .-.+++-+|+.+ ++
T Consensus       365 ~~~---~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t-~~  416 (430)
T d1qfma1         365 DLA---TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK-EE  416 (430)
T ss_dssp             ETT---TCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS-SS
T ss_pred             ECC---CCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCC-CC
Confidence            988   3333333334444555554445544433322    225688888887 54

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.18  E-value=4.3  Score=35.30  Aligned_cols=35  Identities=6%  Similarity=-0.058  Sum_probs=27.8

Q ss_pred             CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152         127 GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN  161 (444)
Q Consensus       127 ~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~  161 (444)
                      -...++|+|.|++++|++--..|.|++++..+++.
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~   60 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSV   60 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcE
Confidence            34678999999999888765579999998777543

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=90.53  E-value=2.8  Score=31.97  Aligned_cols=252  Identities=13%  Similarity=0.125  Sum_probs=129.8

Q ss_pred             CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE------EcCCeEEEEeCCCCccc
Q psy8152           5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA------YSGQKIKIYDTDFKNFN   78 (444)
Q Consensus         5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~------~~d~~i~vw~~~~~~~~   78 (444)
                      +++.|+++...|.+.++-+..++..     .+.    +.+|.....-++.-.++..+      -.-..|++-++...-..
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~v-----kLt----kePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE   95 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETV-----KLN----REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEE   95 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCE-----ECC----SSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCE
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEE-----EEe----cccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCee
Confidence            5568899999999999999888742     111    33443332221112222221      12234555555421111


Q ss_pred             cceeeccc-cccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccc----------cCCCeEEEEEec-cCCEEEEe
Q psy8152          79 TNTDVSFG-EGDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFN----------VGPQLECMKHNK-HSNIIATG  145 (444)
Q Consensus        79 ~~~~~~~~-~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~----------~~~~v~~~~~~~-~~~~l~~~  145 (444)
                      ..+  ... ..+|.++..++ +..++|+....+.+|-++.++... +..          ....|..+-+.. ...-|+++
T Consensus        96 ~~i--~spk~vRI~S~~yddk~vvF~Gased~~~LYviegGklrk-L~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~a  172 (313)
T d2hu7a1          96 QRL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTS  172 (313)
T ss_dssp             EEC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESSCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred             eEe--cCCceEEEEEeeecCceEEEecccCCceEEEEEeCCceee-eccCCCcceEEeccCCeEEEEeeecCCcceEEEE
Confidence            111  121 36677777665 456778888889999998887653 221          122333333322 22234444


Q ss_pred             eC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE----eCCceEEEEEcCCCC
Q psy8152         146 GK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC----SKQGYVRVYDPKITT  220 (444)
Q Consensus       146 ~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~d~~i~i~d~~~~~  220 (444)
                      .. .|.+++++...|.                             ++.....+..+. +++    +...-| -+|++   
T Consensus       173 dl~SG~lri~tpkeGS-----------------------------~~~ay~~~gnKV-~sdyEt~gEsywi-t~D~~---  218 (313)
T d2hu7a1         173 NLSSGGLRVFDSGEGS-----------------------------FSSASISPGMKV-TAGLETAREARLV-TVDPR---  218 (313)
T ss_dssp             ETTTEEEEEECCSSEE-----------------------------EEEEEECTTSCE-EEEEEESSCEEEE-EECTT---
T ss_pred             ecccCCEEEecCCCCc-----------------------------ccceeEccCcee-eeccCCCCceEEE-EEecc---
Confidence            43 5556666554433                             444445554333 332    222223 44666   


Q ss_pred             CccceEEEeCC--------CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152         221 QRRPVLKVDIP--------DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS  292 (444)
Q Consensus       221 ~~~~~~~~~~~--------~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s  292 (444)
                      ..+ ...+...        .-.|+-+-+.|++++++.+-.||.-++|.  + ++.+.+.++   .+..+..- .+....+
T Consensus       219 s~~-yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--n-Gk~in~p~G---~~~gat~i-~~~iyfs  290 (313)
T d2hu7a1         219 DGS-VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--D-GERVEAPQG---NHGRVVLW-RGKLVTS  290 (313)
T ss_dssp             TCC-EEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--T-TEEECCCSS---EEEEEEEE-TTEEEEE
T ss_pred             cCc-eeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCCchheee--c-ceEecCCCC---cccceEEE-CCEEEEe
Confidence            221 1111111        23455566899999989999999999986  3 666665554   23333221 2222222


Q ss_pred             -EECCCcEEEEEcCCCceE
Q psy8152         293 -VSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       293 -~~~dg~i~vw~~~~~~~~  310 (444)
                       .+...--+|-.+.+++++
T Consensus       291 hsSL~tP~kI~~~~~~~~~  309 (313)
T d2hu7a1         291 HTSLSTPPRIVSLPSGEPL  309 (313)
T ss_dssp             EEETTEEEEEEEETTCCEE
T ss_pred             ecccCCCceeEEcCCCCcc
Confidence             333333556666666554

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.11  E-value=6.5  Score=34.13  Aligned_cols=75  Identities=9%  Similarity=0.096  Sum_probs=43.1

Q ss_pred             CCEEEEEcCCCcEEEEEcCCCCccee----EeccccCceeEEEecCCCCE-EEEEECCCcEEEEEcCCCceEEEeecCCc
Q psy8152         244 SHYVIVGSTTGDMMAVDLRGKGKPCY----KYKGFAGCVKDIACPLNENL-ILSVSLDRHFRVHDFHSKKLLRKDYMQSR  318 (444)
Q Consensus       244 ~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~h~~~i~~~~~s~~~~~-l~s~~~dg~i~vw~~~~~~~~~~~~~~~~  318 (444)
                      +.+|+..-..+.|....+...+....    .+..-.+.+..|++.|||.+ .++-...|.  ||. ..+.++..+...++
T Consensus       369 g~lfvg~l~~~~i~~v~~~~~~~~~~~~~~~~~~~~~R~rdv~~gpDGs~lyv~~d~~G~--i~r-~~~~~~~~~~~p~~  445 (450)
T d1crua_         369 NTLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVLTDTAGN--VQK-DDGSVTNTLENPGS  445 (450)
T ss_dssp             TEEEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEEEEEECTTSSCEEEEECSSCC--EEC-TTSCEECCCSSTTC
T ss_pred             CCEEEEECcCCEEEEEEEcCCCceeeEEEEeccCCCCCceEEEECCCCCEEEEEECCCCC--Eec-CCCceEEEeCCCCe
Confidence            55666655677777777765222111    11122357889999999984 455544554  454 44555555555555


Q ss_pred             eeE
Q psy8152         319 LTS  321 (444)
Q Consensus       319 i~~  321 (444)
                      |..
T Consensus       446 ~~~  448 (450)
T d1crua_         446 LIK  448 (450)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            543

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.64  E-value=7.3  Score=31.98  Aligned_cols=191  Identities=10%  Similarity=0.074  Sum_probs=106.4

Q ss_pred             cCCcEEEEEEcCCeEEEEeCCCCc--cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEE---cCC------CCc
Q psy8152          53 VEESELLIAYSGQKIKIYDTDFKN--FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWR---YKT------EPD  119 (444)
Q Consensus        53 ~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~---~~~------~~~  119 (444)
                      |+...+++-+.+|.|+--.+..-+  -...+.... ...+..+  +.....|+.-+..|.++...   +..      |.+
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k~-~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~p   81 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH   81 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCcccC-CceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccccccccc
Confidence            467788889999999865543210  011111112 2233332  34455566667778766554   332      333


Q ss_pred             cccccc--cCCCeEEEE-Eec--cCCEEEEeeCCCeEEEEEcCCce--------eeeeeecccceeeEeeeCCCcccccC
Q psy8152         120 QWTNFN--VGPQLECMK-HNK--HSNIIATGGKENDLKLWDLNTTK--------NIFSAKNVSHRVLVYSVKPDEFDLRR  186 (444)
Q Consensus       120 ~~~~~~--~~~~v~~~~-~~~--~~~~l~~~~~d~~i~vwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (444)
                      +..+..  ....+..+. ..+  ...+|+..+..|.++...+..-.        ....+..                   
T Consensus        82 i~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~-------------------  142 (323)
T d1wp5a_          82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-------------------  142 (323)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-------------------
T ss_pred             ceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccc-------------------
Confidence            322222  334444443 332  46788899999999998875321        1112211                   


Q ss_pred             ccceeEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152         187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVD  260 (444)
Q Consensus       187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  260 (444)
                      ...+..+........++.++..|.+..|+...      ...+.....+.....-|......+++..|++.+..|..+...
T Consensus       143 ~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~  222 (323)
T d1wp5a_         143 DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMK  222 (323)
T ss_dssp             TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEE
T ss_pred             cccccceeccCCCeEEEEEEecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeeccc
Confidence            12466777766668888899999999998761      011111122222233233444555677888888899888766


Q ss_pred             cCC
Q psy8152         261 LRG  263 (444)
Q Consensus       261 ~~~  263 (444)
                      +..
T Consensus       223 ~~e  225 (323)
T d1wp5a_         223 LTE  225 (323)
T ss_dssp             GGG
T ss_pred             chh
Confidence            543

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=82.56  E-value=8.4  Score=29.28  Aligned_cols=220  Identities=12%  Similarity=0.098  Sum_probs=112.2

Q ss_pred             CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE-EeCCC--eEEEE------ecCCcEEEEEcCC-CCccccc
Q psy8152          54 EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV-SRYDE--CILTA------VKSGDVKLWRYKT-EPDQWTN  123 (444)
Q Consensus        54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~-s~~~~--~l~~~------~~dg~i~iw~~~~-~~~~~~~  123 (444)
                      +.++|+++...|.+.++-+..++.++.-     ..+|... .|...  ++..+      -.-..|++-+++. ++... +
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLt-----kePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~-i   98 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLN-----REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQR-L   98 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECC-----SSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEE-C
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEe-----cccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeE-e
Confidence            4568888888899999988877766542     2233222 23322  22221      1123355555542 22221 2


Q ss_pred             cc-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee--eeecccceeeEeeeCCCcccccCccceeEEEEe-cCC
Q psy8152         124 FN-VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-PNS  199 (444)
Q Consensus       124 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~  199 (444)
                      .. ..-.|.+++.. +.+..++|+......+|-+..|+...  .+++..-   +-.+..        ..|..+.+- +..
T Consensus        99 ~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsF---VtDI~~--------d~I~G~g~~~g~~  166 (313)
T d2hu7a1          99 EAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGF---VSDIRG--------DLIAGLGFFGGGR  166 (313)
T ss_dssp             TTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEE---EEEEET--------TEEEEEEEEETTE
T ss_pred             cCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcce---EEeccC--------CeEEEEeeecCCc
Confidence            11 12345566654 55677888888889999888776432  2221111   000000        023444433 222


Q ss_pred             CEEEEEeC-CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc----CCCcEEEEEcCCCCcce-eEecc
Q psy8152         200 DKVAVCSK-QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS----TTGDMMAVDLRGKGKPC-YKYKG  273 (444)
Q Consensus       200 ~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~-~~~~~  273 (444)
                      +-|+++.. .|.+++++..              .+.++.....+..+. +++-    ...-| -+|++. ++.- ..++.
T Consensus       167 ~sfF~adl~SG~lri~tpk--------------eGS~~~ay~~~gnKV-~sdyEt~gEsywi-t~D~~s-~~yerve~P~  229 (313)
T d2hu7a1         167 VSLFTSNLSSGGLRVFDSG--------------EGSFSSASISPGMKV-TAGLETAREARLV-TVDPRD-GSVEDLELPS  229 (313)
T ss_dssp             EEEEEEETTTEEEEEECCS--------------SEEEEEEEECTTSCE-EEEEEESSCEEEE-EECTTT-CCEEECCCSS
T ss_pred             ceEEEEecccCCEEEecCC--------------CCcccceeEccCcee-eeccCCCCceEEE-EEeccc-CceeeeecCc
Confidence            33444444 6666666655              233444444443332 3221    11123 336664 2211 11111


Q ss_pred             ------ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152         274 ------FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL  310 (444)
Q Consensus       274 ------h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~  310 (444)
                            ..-.|+-+-+.|++++++.+-.||.=++|.  +|+.+
T Consensus       230 kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--nGk~i  270 (313)
T d2hu7a1         230 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERV  270 (313)
T ss_dssp             CHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--TTEEE
T ss_pred             ccceeecceEEEeeeeCCCCcEEEEEecCCchheee--cceEe
Confidence                  123456667899999989999999998886  34443