Psyllid ID: psy8177

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
MIFPTHQRAQGNKLYYQEALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSLDPSGT
ccccccHHHHccHHHHHHHHccccccccccccccccccccccHHHHHHHHccccccccccccccccEEEEEccccccEEccccEEEEEEccccEEEEcccccHHHHHHHHHHHcccccccEEEEcccccEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccccccEEEEEEEEEccccccccccccccccEEEcccccEEEEEcccccccccccccccccccccccEEEEEEcccccccccccccccccccccEEEEEcccccccccccccc
ccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHcccccccccHcccEEEEEEcccccEEEEcccEEEEEccccEEEEEEccccHHHHHHHHHHHcHHHcEEEEEccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHcccccccccHcEEEEccccccccccccccccccccHHHccccccEEEEEEEEHcccHccccccccccccEEccccccEEEEEEcccccccccccccccccEEEcccEEEcccccccccccccccEEHHHHHHHHHHHcccHHHEccccccc
mifpthqraqgnKLYYQEAlnkspelkdeppkvnnvaptlevteREKYEMLcrgdltvppaIVAQLKCryvhrnvpylrlmplkeeeaylqprIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRisksawlrepehpvIERISRRVEhmtglttstaeELQVVNygigghyephydfarpgeanafkslgtgnrVATVLFYMSDVAQGGATVFTSLNlslwpekgtAAFWHnlhssgdgdyytrhaacpvltgsnslhstcpcglrrglqrsgiICTLVGMVITIRGMlpvlysldpsgt
mifpthqraqgnkLYYQEALNkspelkdeppkvnnVAPTLEVTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKkmaqprlrratvqnyktgeleianyrisksawlrepehPVIERISRRVEHMTglttstaeelQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRgmlpvlysldpsgt
MIFPTHQRAQGNKLYYQEALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSLDPSGT
*****************************************VTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSL*****
MIFPTHQRAQGNKLYYQE*************************EREKYEMLC**************KCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPR***************IANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSL*****
**********GNKLYYQEALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSLDPSGT
MIFPTHQRAQGNKLYYQEALNKSP************APTLEVTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSLD****
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MIFPTHQRAQGNKLYYQEALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHSTCPCGLRRGLQRSGIICTLVGMVITIRGMLPVLYSLDPSGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query312 2.2.26 [Sep-21-2011]
Q20065539 Prolyl 4-hydroxylase subu yes N/A 0.910 0.526 0.510 5e-80
Q5RAG8534 Prolyl 4-hydroxylase subu yes N/A 0.839 0.490 0.530 4e-79
P13674534 Prolyl 4-hydroxylase subu yes N/A 0.839 0.490 0.530 4e-79
Q60715534 Prolyl 4-hydroxylase subu yes N/A 0.839 0.490 0.530 1e-78
Q1RMU3534 Prolyl 4-hydroxylase subu yes N/A 0.842 0.492 0.525 1e-78
P16924516 Prolyl 4-hydroxylase subu yes N/A 0.839 0.507 0.531 3e-78
P54001534 Prolyl 4-hydroxylase subu yes N/A 0.839 0.490 0.523 1e-77
Q60716537 Prolyl 4-hydroxylase subu no N/A 0.839 0.487 0.525 2e-75
O15460535 Prolyl 4-hydroxylase subu no N/A 0.839 0.489 0.518 6e-75
Q10576559 Prolyl 4-hydroxylase subu no N/A 0.875 0.488 0.472 5e-68
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1 Back     alignment and function desciption
 Score =  298 bits (762), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 151/296 (51%), Positives = 200/296 (67%), Gaps = 12/296 (4%)

Query: 2   IFPTHQRAQGNKLYYQEALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLT-VPP 60
           I P H RA+GN  +Y++ L     + D PP VN       + ER+ YE LCRG++  V P
Sbjct: 235 IAPNHPRAKGNVKWYEDMLQGKDMVGDLPPIVNKRVEYDGIVERDAYEALCRGEIPPVEP 294

Query: 61  AIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRA 120
               +L+C Y+ R+ P+L+L P+K E     P  +L+++V++DSEI++IK++A P+L+RA
Sbjct: 295 KWKNKLRC-YLKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRA 353

Query: 121 TVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIG 180
           TVQN KTGELE A YRISKSAWL+    PVI+R++RR+E  T L  +T+EELQV NYG+G
Sbjct: 354 TVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLG 413

Query: 181 GHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAA 240
           GHY+PH+DFAR  E NAFK+L TGNR+ATVLFYMS   +GGATVF  L  +++P K  A 
Sbjct: 414 GHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDAL 473

Query: 241 FWHNLHSSGDGDYYTRHAACPVLTG----SNS-LHS-----TCPCGLRRGLQRSGI 286
           FW+NL   G+GD  TRHAACPVL G    SN  +H      T PCGL   +Q + I
Sbjct: 474 FWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQEFTRPCGLEEEVQENFI 529
Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.
Caenorhabditis elegans (taxid: 6239)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 2
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1 Back     alignment and function description
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2 Back     alignment and function description
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2 Back     alignment and function description
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1 Back     alignment and function description
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1 Back     alignment and function description
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2 Back     alignment and function description
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1 Back     alignment and function description
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1 Back     alignment and function description
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
345481336 556 PREDICTED: prolyl 4-hydroxylase subunit 0.849 0.476 0.624 1e-104
380025232 537 PREDICTED: prolyl 4-hydroxylase subunit 0.849 0.493 0.620 1e-104
350416719 557 PREDICTED: prolyl 4-hydroxylase subunit 0.849 0.475 0.624 1e-104
340722330 557 PREDICTED: prolyl 4-hydroxylase subunit 0.849 0.475 0.624 1e-104
383864775 550 PREDICTED: prolyl 4-hydroxylase subunit 0.849 0.481 0.637 1e-104
328790718 415 PREDICTED: prolyl 4-hydroxylase subunit 0.849 0.638 0.620 1e-103
332026992 415 Prolyl 4-hydroxylase subunit alpha-1 [Ac 0.849 0.638 0.620 1e-103
307190793 476 Prolyl 4-hydroxylase subunit alpha-2 [Ca 0.849 0.556 0.613 1e-101
307211752 415 Prolyl 4-hydroxylase subunit alpha-1 [Ha 0.849 0.638 0.609 1e-101
91091610 536 PREDICTED: similar to prolyl 4-hydroxyla 0.891 0.518 0.602 4e-96
>gi|345481336|ref|XP_001600680.2| PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/282 (62%), Positives = 218/282 (77%), Gaps = 17/282 (6%)

Query: 2   IFPTHQRAQGNKLYYQEALNK---------SPELKDEPPKVNN--------VAPTLEVTE 44
           + PTHQRA GN+ YYQE + K           +  ++ P  +         +    E+TE
Sbjct: 242 LVPTHQRALGNRAYYQEEIQKRTNESRRKRGEDGSEDTPAADQHFTVTEKKIKSVSEMTE 301

Query: 45  REKYEMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDS 104
           RE+YEMLCRG++ +P +I  +L+CRYV R +P+L++ P KEEEAYL PRI++Y DV+YD 
Sbjct: 302 RERYEMLCRGEIKMPLSIQKELRCRYVDRGIPFLKIAPFKEEEAYLDPRIVIYHDVIYDD 361

Query: 105 EIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGL 164
           EI+ IK+MAQPR +RATVQNYKTGELEIANYRISKSAWL+E EH  +  +S+RVEHMT +
Sbjct: 362 EIETIKRMAQPRFKRATVQNYKTGELEIANYRISKSAWLQEHEHKHVRAVSQRVEHMTSM 421

Query: 165 TTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATV 224
           +  TAEELQVVNYGIGGHYEPH+DFAR  E NAFKSLGTGNR+ATVL+YMSDV QGG TV
Sbjct: 422 SIETAEELQVVNYGIGGHYEPHFDFARREEKNAFKSLGTGNRIATVLYYMSDVEQGGGTV 481

Query: 225 FTSLNLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
           FT +N+SLWP+KG+AAFW+NL  +G+GDY TRHAACPVLTGS
Sbjct: 482 FTKINISLWPKKGSAAFWYNLKPNGEGDYKTRHAACPVLTGS 523

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|380025232|ref|XP_003696381.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Apis florea] Back     alignment and taxonomy information
>gi|350416719|ref|XP_003491070.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340722330|ref|XP_003399560.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383864775|ref|XP_003707853.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328790718|ref|XP_392392.4| PREDICTED: prolyl 4-hydroxylase subunit alpha-1 [Apis mellifera] Back     alignment and taxonomy information
>gi|332026992|gb|EGI67088.1| Prolyl 4-hydroxylase subunit alpha-1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307190793|gb|EFN74662.1| Prolyl 4-hydroxylase subunit alpha-2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307211752|gb|EFN87747.1| Prolyl 4-hydroxylase subunit alpha-1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91091610|ref|XP_969386.1| PREDICTED: similar to prolyl 4-hydroxylase alpha subunit 1, putative [Tribolium castaneum] gi|270001037|gb|EEZ97484.1| hypothetical protein TcasGA2_TC011321 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
FB|FBgn0039776550 PH4alphaEFB "prolyl-4-hydroxyl 0.849 0.481 0.600 6.4e-83
UNIPROTKB|E1BY52538 P4HA1 "Prolyl 4-hydroxylase su 0.839 0.486 0.545 1.9e-74
WB|WBGene00004025539 phy-2 [Caenorhabditis elegans 0.910 0.526 0.510 3.1e-74
UNIPROTKB|A1X898534 P4HA1 "Uncharacterized protein 0.839 0.490 0.534 6.5e-74
UNIPROTKB|P13674534 P4HA1 "Prolyl 4-hydroxylase su 0.836 0.488 0.539 1.1e-73
UNIPROTKB|E2RLA2534 P4HA1 "Uncharacterized protein 0.839 0.490 0.527 3.6e-73
MGI|MGI:97463534 P4ha1 "procollagen-proline, 2- 0.836 0.488 0.528 3.6e-73
UNIPROTKB|F1NPC3515 P4HA1 "Prolyl 4-hydroxylase su 0.839 0.508 0.531 7.5e-73
UNIPROTKB|P16924516 P4HA1 "Prolyl 4-hydroxylase su 0.839 0.507 0.531 7.5e-73
UNIPROTKB|Q1RMU3534 P4HA1 "Prolyl 4-hydroxylase su 0.839 0.490 0.527 7.5e-73
FB|FBgn0039776 PH4alphaEFB "prolyl-4-hydroxylase-alpha EFB" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 167/278 (60%), Positives = 202/278 (72%)

Query:     2 IFPTHQRAQGNKLYYQEALNKSPELK--------DEPPKVN-NVA---PTL-EVTEREKY 48
             + P H+RA GNK +Y++ + +  +L+        DE PK +  VA   P + ++TER  Y
Sbjct:   243 LLPHHERANGNKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAY 302

Query:    49 EMLCRGDLTVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDL 108
             EMLCRG+L   P+ +  L+CRYV   VP+LRL PLK EE +  P I++Y D MYDSEIDL
Sbjct:   303 EMLCRGELKPSPSDLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDL 362

Query:   109 IKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTST 168
             IK+MA+PR RRATVQN  TG LE ANYRISKSAWL+  E  VIE + +R   MTGL   +
Sbjct:   363 IKRMARPRFRRATVQNSVTGALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDS 422

Query:   169 AEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSL 228
             AEELQVVNYGIGGHYEPH+DFAR  E  AF+ L  GNR+ATVLFYMSDV QGGATVFTSL
Sbjct:   423 AEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSL 482

Query:   229 NLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
             + +L+P+KGTAAFW NLH  G GD  TRHAACPVLTG+
Sbjct:   483 HTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTGT 520
GO:0016222 "procollagen-proline 4-dioxygenase complex" evidence=IC
GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS
GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=ISS
GO:0005506 "iron ion binding" evidence=IEA
GO:0031418 "L-ascorbic acid binding" evidence=IEA
GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IEA
UNIPROTKB|E1BY52 P4HA1 "Prolyl 4-hydroxylase subunit alpha-1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00004025 phy-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|A1X898 P4HA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P13674 P4HA1 "Prolyl 4-hydroxylase subunit alpha-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RLA2 P4HA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:97463 P4ha1 "procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPC3 P4HA1 "Prolyl 4-hydroxylase subunit alpha-1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P16924 P4HA1 "Prolyl 4-hydroxylase subunit alpha-1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q1RMU3 P4HA1 "Prolyl 4-hydroxylase subunit alpha-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q1RMU3P4HA1_BOVIN1, ., 1, 4, ., 1, 1, ., 20.52550.84290.4925yesN/A
P16924P4HA1_CHICK1, ., 1, 4, ., 1, 1, ., 20.53110.83970.5077yesN/A
P54001P4HA1_RAT1, ., 1, 4, ., 1, 1, ., 20.52360.83970.4906yesN/A
Q5RAG8P4HA1_PONAB1, ., 1, 4, ., 1, 1, ., 20.53090.83970.4906yesN/A
Q20065P4HA2_CAEEL1, ., 1, 4, ., 1, 1, ., 20.51010.91020.5269yesN/A
P13674P4HA1_HUMAN1, ., 1, 4, ., 1, 1, ., 20.53090.83970.4906yesN/A
Q60715P4HA1_MOUSE1, ., 1, 4, ., 1, 1, ., 20.53090.83970.4906yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
smart00702165 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun 7e-42
PLN00052310 PLN00052, PLN00052, prolyl 4-hydroxylase; Provisio 3e-27
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 7e-04
>gnl|CDD|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information 
 Score =  142 bits (359), Expect = 7e-42
 Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 25/173 (14%)

Query: 102 YDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLR-EPEHPVIERISRRVEH 160
             +E   + + A+P   R  V        E + YR S   WL       VIERI +R+  
Sbjct: 1   SPAECQKLLEEAEPLGWRGEVTRGIGNPNETSQYRQSNGTWLELLERDLVIERIRQRLAD 60

Query: 161 MTGL---TTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDV 217
             GL      +AE+ QV  YG GGHY PH D               G+R+AT + Y++DV
Sbjct: 61  FLGLLAGLPLSAEDAQVARYGPGGHYGPHVDNFL-----------YGDRIATFILYLNDV 109

Query: 218 AQGGATVFTSLNL----SLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
            +GG  VF  L L    ++ P+KG   F+ + H        + H  CPV  GS
Sbjct: 110 EEGGELVFPGLRLMVVATVKPKKGDLLFFPSGHGR------SLHGVCPVTRGS 156

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165
>gnl|CDD|177683 PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 312
KOG1591|consensus289 100.0
PLN00052310 prolyl 4-hydroxylase; Provisional 100.0
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 100.0
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 99.89
PHA02813 354 hypothetical protein; Provisional 99.63
PHA02869 418 C4L/C10L-like gene family protein; Provisional 99.63
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 99.38
COG3128229 PiuC Uncharacterized iron-regulated protein [Funct 99.22
PF1366170 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily 98.22
PF03336 339 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR 98.09
TIGR02408277 ectoine_ThpD ectoine hydroxylase. Both ectoine and 97.89
KOG3710|consensus280 97.87
PHA02866 333 Hypothetical protein; Provisional 97.8
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 97.68
PF05721211 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: 97.56
COG3751252 EGL-9 Predicted proline hydroxylase [Posttranslati 97.4
PF09859173 Oxygenase-NA: Oxygenase, catalysing oxidative meth 96.93
TIGR01762288 chlorin-enz chlorinating enzymes. This model repre 96.79
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 95.79
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 95.68
KOG3844|consensus 476 95.4
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.66
TIGR02466201 conserved hypothetical protein. This family consis 94.56
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 91.33
PHA02923 315 hypothetical protein; Provisional 90.53
KOG3200|consensus224 82.75
KOG3959|consensus306 82.62
>KOG1591|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.5e-59  Score=435.64  Aligned_cols=227  Identities=45%  Similarity=0.817  Sum_probs=202.1

Q ss_pred             hHHHHHHhcccCCCCC-CCCCCCCceEEeecCCCCccccCCceeeehccCCcEEEEcCCCCHHHHHHHHHHhcCcCccce
Q psy8177          43 TEREKYEMLCRGDLTV-PPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRAT  121 (312)
Q Consensus        43 ~~~~~~~~lCrg~~~~-~~~~~~~L~C~y~~~~~p~l~laPlk~E~ls~~P~I~v~~d~Ls~~Ec~~Li~la~~~l~~s~  121 (312)
                      ++...|+..|||+... ++.....+.|++...  ||+++||+|+|++|++|+|++||||||++||++|+.+|++++++++
T Consensus        49 ~~~~~~~~~c~g~~~~~~~~~~~~~~~~~~~~--~~~~~ap~k~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~st  126 (289)
T KOG1591|consen   49 QEFTVYEQGCRGELPPLTKLTLRRLSCRNRAG--PFLRLAPVKLEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERST  126 (289)
T ss_pred             ccccchhhhccCccCccchhHhhhhhcccccC--cceeecchhhhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhcee
Confidence            4567799999999653 333456677877644  9999999999999999999999999999999999999999999999


Q ss_pred             ee-eCCCCceeeeeeeeecccccCCCCcHHHHHHHHHHHHhcCCCccccccccccccCCCCcccccccCCCCCCcccccc
Q psy8177         122 VQ-NYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKS  200 (312)
Q Consensus       122 v~-~~~~g~~~~~~~R~s~~awl~~~~~~~~~~i~~RI~~~tGl~~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~~~~~  200 (312)
                      |. +..+|....+.+|+|+++|+..+.++++++|++||+++||++++.+|.|||+||++||||.||+|++.......+..
T Consensus       127 v~~~~~~~~~~~~~~R~S~~t~l~~~~~~~~~~i~~ri~~~T~l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~  206 (289)
T KOG1591|consen  127 VVADKGTGHSTTSAVRTSSGTFLPDGASPVVSRIEQRIADLTGLPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNG  206 (289)
T ss_pred             eeccCCcccccceeeEecceeEecCCCCHHHHHHHHHHHhccCCCcccCccceEEEecCCccccccccccccccchhhhh
Confidence            95 55567766777899999999987899999999999999999999999999999999999999999996522222344


Q ss_pred             CCCCCeEEEEEEeccCCCCCceeeecCCCe--EEeccCccEEEEccCCCCCCCCCCCcccccccccceeEEee
Q psy8177         201 LGTGNRVATVLFYMSDVAQGGATVFTSLNL--SLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHS  271 (312)
Q Consensus       201 ~~~g~R~aT~L~YLnDv~~GG~TvFp~~~~--~V~P~kGsal~f~n~~~~g~~d~~tlH~gcPV~~G~KwI~~  271 (312)
                      .+.|+|++|+|+||+||++||+|+||.++.  +|+|+||+|+||+|+++||.+|++|+|+||||+.|+||+++
T Consensus       207 ~~~g~RiaT~l~yls~v~~GG~TvFP~~~~~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~  279 (289)
T KOG1591|consen  207 LNGGNRIATVLMYLSDVEQGGETVFPNLGMKPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIAT  279 (289)
T ss_pred             cccCCcceeEEEEecccCCCCcccCCCCCCcccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeee
Confidence            457999999999999999999999999999  99999999999999999999999999999999999999544

>PLN00052 prolyl 4-hydroxylase; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PHA02813 hypothetical protein; Provisional Back     alignment and domain information
>PHA02869 C4L/C10L-like gene family protein; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown] Back     alignment and domain information
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae Back     alignment and domain information
>TIGR02408 ectoine_ThpD ectoine hydroxylase Back     alignment and domain information
>KOG3710|consensus Back     alignment and domain information
>PHA02866 Hypothetical protein; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases Back     alignment and domain information
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function Back     alignment and domain information
>TIGR01762 chlorin-enz chlorinating enzymes Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>KOG3844|consensus Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PHA02923 hypothetical protein; Provisional Back     alignment and domain information
>KOG3200|consensus Back     alignment and domain information
>KOG3959|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
2jij_A233 Crystal Structure Of The Apo Form Of Chlamydomonas 7e-21
3gze_A225 Algal Prolyl 4-Hydroxylase Complexed With Zinc And 8e-21
2jig_A224 Crystal Structure Of Chlamydomonas Reinhardtii Prol 8e-21
2v4a_A233 Crystal Structure Of The Semet-Labeled Prolyl-4 Hyd 6e-20
3itq_A216 Crystal Structure Of A Prolyl 4-Hydroxylase From Ba 5e-18
>pdb|2JIJ|A Chain A, Crystal Structure Of The Apo Form Of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I Length = 233 Back     alignment and structure 
Iteration: 1

 Score = 97.8 bits (242), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 19/192 (9%)
Query: 92  PRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVI 151
           PR  L ++ + D E D I + A+P++ +++V + ++G+   +  R S   W  + E  VI
Sbjct: 29  PRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVI 88
Query: 152 ERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYD-FARPGEANAFKSLGTGNRVATV 210
            +I +RV  +T +     E LQV++Y  G  YEPHYD F  P   NA    G G RV T+
Sbjct: 89  SKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDP--VNAGPEHG-GQRVVTM 145
Query: 211 LFYMSDVAQGGATVFTSL---------------NLSLWPEKGTAAFWHNLHSSGDGDYYT 255
           L Y++ V +GG TV  +                 L++ P KG A  +++L   G  D  +
Sbjct: 146 LMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPAS 205
Query: 256 RHAACPVLTGSN 267
            H +CP L G  
Sbjct: 206 LHGSCPTLKGDK 217
>pdb|3GZE|A Chain A, Algal Prolyl 4-Hydroxylase Complexed With Zinc And (Ser-Pro)5 Peptide Substrate Length = 225 Back     alignment and structure
>pdb|2JIG|A Chain A, Crystal Structure Of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I Complexed With Zinc And Pyridine-2,4- Dicarboxylate Length = 224 Back     alignment and structure
>pdb|2V4A|A Chain A, Crystal Structure Of The Semet-Labeled Prolyl-4 Hydroxylase (P4h) Type I From Green Algae Chlamydomonas Reinhardtii. Length = 233 Back     alignment and structure
>pdb|3ITQ|A Chain A, Crystal Structure Of A Prolyl 4-Hydroxylase From Bacillus Anthracis Length = 216 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 2e-81
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 8e-75
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Length = 216 Back     alignment and structure
 Score =  244 bits (625), Expect = 2e-81
 Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 12/201 (5%)

Query: 67  KCRYVHR-NVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNY 125
           +  + H+ NV       ++    + +P I++  +V+ D E D + ++++ +L R+ V + 
Sbjct: 13  QTIFDHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS 72

Query: 126 KTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEP 185
           +    ++ + R S  A+L   ++ +  +I +R+  +  +  S  E L ++NY +   Y+ 
Sbjct: 73  R----DVNDIRTSSGAFL--DDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKA 126

Query: 186 HYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNL 245
           HYD+      +        NR++T++ Y++DV +GG T F  LNLS+ P KG A ++   
Sbjct: 127 HYDYFAEHSRS-----AANNRISTLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYF 181

Query: 246 HSSGDGDYYTRHAACPVLTGS 266
           +     +  T H   PV  G 
Sbjct: 182 YQDQSLNELTLHGGAPVTKGE 202
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Length = 224 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 100.0
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 99.96
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 99.82
3kt7_A 633 PKHD-type hydroxylase TPA1; double-stranded beta h 98.73
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 97.98
2a1x_A308 Phytanoyl-COA dioxygenase; beta jelly roll, double 97.45
2fct_A313 Syringomycin biosynthesis enzyme 2; mononuclear ir 97.12
2rdq_A288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II 96.89
3emr_A310 ECTD; double stranded beta helix, oxidoreductase; 96.8
2opw_A291 Phyhd1 protein; double-stranded beta helix, oxygen 96.61
3gja_A319 CYTC3; halogenase, beta barrel, biosynthetic prote 96.07
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 95.89
3nnf_A344 CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependen 95.85
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 95.52
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 95.24
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 93.11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
Probab=100.00  E-value=5.9e-50  Score=360.82  Aligned_cols=192  Identities=30%  Similarity=0.495  Sum_probs=174.4

Q ss_pred             cccCCceeeehccCCcEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCceeeeeeeeecccccCCCCcHHHHHHHHH
Q psy8177          78 LRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRR  157 (312)
Q Consensus        78 l~laPlk~E~ls~~P~I~v~~d~Ls~~Ec~~Li~la~~~l~~s~v~~~~~g~~~~~~~R~s~~awl~~~~~~~~~~i~~R  157 (312)
                      ..++|.|+|+||++|+|++||||||++||++|++++++.+++|++.++.+|....+.+|+|+.+|+...+++++++|.+|
T Consensus         6 ~~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~r   85 (224)
T 2jig_A            6 KEEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKR   85 (224)
T ss_dssp             -CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHH
T ss_pred             ccccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHH
Confidence            45889999999999999999999999999999999999999999998777777788899999999997778999999999


Q ss_pred             HHHhcCCCccccccccccccCCCCcccccccCCCCCCccccccCCCCCeEEEEEEeccCCCCCceeeecCC---------
Q psy8177         158 VEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSL---------  228 (312)
Q Consensus       158 I~~~tGl~~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~~~~~~~~g~R~aT~L~YLnDv~~GG~TvFp~~---------  228 (312)
                      |.+++|+++..+|.+||+||++|++|++|+|++...... .. ...++|++|+|+||||+++||+|+||.+         
T Consensus        86 i~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~-~~-~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~  163 (224)
T 2jig_A           86 VAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNA-GP-EHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGW  163 (224)
T ss_dssp             HHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSS-SC-CCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTS
T ss_pred             HHHHhCCCcccccceEEEecCCCccccCcccCCCCcccc-cc-ccCCCeEEEEEEEecCCCCCCceeCCCcccccccccc
Confidence            999999999999999999999999999999997643210 00 1248999999999999999999999987         


Q ss_pred             ------CeEEeccCccEEEEccCCCCCCCCCCCcccccccccceeEEee
Q psy8177         229 ------NLSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSNSLHS  271 (312)
Q Consensus       229 ------~~~V~P~kGsal~f~n~~~~g~~d~~tlH~gcPV~~G~KwI~~  271 (312)
                            +++|+|++|+||||+|++++|++|++++|+||||+.|+||+.+
T Consensus       164 ~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~  212 (224)
T 2jig_A          164 SECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSAT  212 (224)
T ss_dssp             CTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEE
T ss_pred             cccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEE
Confidence                  6999999999999999999999999999999999999999654
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9 Back     alignment and structure
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A* Back     alignment and structure
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens} Back     alignment and structure
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A* Back     alignment and structure
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
d2fcta1308 Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudom 97.44
d2a1xa1296 Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapie 97.39
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 94.1
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.58
>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: PhyH-like
domain: Syringomycin biosynthesis enzyme 2, SyrB2
species: Pseudomonas syringae pv. syringae [TaxId: 321]

Probab=97.44  E-value=0.00055  Score=60.34  Aligned_cols=165  Identities=16%  Similarity=0.058  Sum_probs=87.8

Q ss_pred             eeehccCCcEEEEcCCCCHHHHHHHHHHhcCcC-cc--ceeeeCCCCceeeeeeeeecccccCCCCcHHH------HHHH
Q psy8177          85 EEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRL-RR--ATVQNYKTGELEIANYRISKSAWLREPEHPVI------ERIS  155 (312)
Q Consensus        85 ~E~ls~~P~I~v~~d~Ls~~Ec~~Li~la~~~l-~~--s~v~~~~~g~~~~~~~R~s~~awl~~~~~~~~------~~i~  155 (312)
                      ++....+-|| ++.++||++|++.|.+.....+ ..  ....+.. ........+ ....++.   .+.+      .+|.
T Consensus        10 ~~~f~~~Gyl-~i~~~~s~~ei~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~---~~~~~~l~~~p~il   83 (308)
T d2fcta1          10 RASFEKNGFI-GPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLD-AISGGTNIA-NYDRHLD---DDFLASHICRPEIC   83 (308)
T ss_dssp             HHHHHHHSEE-EEEESSCHHHHHHHHHHHHHHHTCCTTCSCCCCC-C----CGGG-GBCGGGT---CHHHHHHTTCHHHH
T ss_pred             HHHHHhCCEE-ECcCccCHHHHHHHHHHHHHHHhhcccccccccc-cccCcccee-eehhhhc---CHHHHHhhcCchhh
Confidence            3344556665 6799999999999877654211 10  0010000 000000111 1112222   2222      2345


Q ss_pred             HHHHHhcCCCccccccccccccCCCCcccccccCCCCCCcc----ccccCCCCCeEEEEEEeccCCC--CCceeeecCC-
Q psy8177         156 RRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFARPGEAN----AFKSLGTGNRVATVLFYMSDVA--QGGATVFTSL-  228 (312)
Q Consensus       156 ~RI~~~tGl~~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~----~~~~~~~g~R~aT~L~YLnDv~--~GG~TvFp~~-  228 (312)
                      ..+++++|-+.......-+.+..-++.+.||.|...-....    .+.........+|+.++|.|+.  .|+-.+.|.- 
T Consensus        84 ~~v~~llG~~~~~~~~~~~~k~p~~~~~~wHqD~~y~~~~~~~~~~~~~~~~~~~~vtvwiaL~D~~~enG~l~viPGSH  163 (308)
T d2fcta1          84 DRVESILGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQ  163 (308)
T ss_dssp             HHHHHHHCSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCT
T ss_pred             hHHHHhhcccceeeecccccccccccccccccccccccCCCCcccccCCCCCCCceEEEEEecccccccceeEEEeeCCc
Confidence            56677778554332222334554456688999975422110    0111112456899999999975  3444445531 


Q ss_pred             --------------------------------------------------CeEEeccCccEEEEccCCCCCCCCCCCccc
Q psy8177         229 --------------------------------------------------NLSLWPEKGTAAFWHNLHSSGDGDYYTRHA  258 (312)
Q Consensus       229 --------------------------------------------------~~~V~P~kGsal~f~n~~~~g~~d~~tlH~  258 (312)
                                                                        .+.|.-++|+++||..         .++|+
T Consensus       164 k~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~lkaGdvlif~~---------~l~Hg  234 (308)
T d2fcta1         164 NSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFWS---------TLMHA  234 (308)
T ss_dssp             TSCCBCTTSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEET---------TSEEE
T ss_pred             cCCccccccccccCcccccccccccccccccccccccccccccccccccceEEEeeCCCeEEEECC---------Ccccc
Confidence                                                              0234457899999985         89999


Q ss_pred             cccccc
Q psy8177         259 ACPVLT  264 (312)
Q Consensus       259 gcPV~~  264 (312)
                      +-|-..
T Consensus       235 S~pN~~  240 (308)
T d2fcta1         235 SYPHSG  240 (308)
T ss_dssp             ECCBCS
T ss_pred             CCCCCC
Confidence            999863
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure