Psyllid ID: psy8296

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700
MPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFIMSTKHISNLNP
ccccccHHHHHHcccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHccccccccccEEEcccccccccccHHHHHHHHHHHHHccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccEEEEcccHHHHHcccccEEEEEEEccccEEEcccHHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHcccccccccccEEEccccccccccccccccccHHHHHHccccccHHHHHHHcccccEEEEEcccHHcHHHHHHHHccccEEccEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccEEEcHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccEEEcccccEEEEEEEEEEEEEccccEEEEEEEEcccccccccccccHHHHHccccccccccccEEEEEEcccccHHHHHHHHHHHHHHccccccccccccEEEEEEcHHHHHccccccccccccEEEEEEcccHHHHccccccccccc
ccccccEEEEEEccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccccEEEEEcccccccccHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHcccccHHHcHHHHccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHcccEEEEEEccccEEEEEccHHHHHHHHHHHHHcccEEEEEEEcEEEcccHHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHccccccEEEcccccccccHHHHHHHHHHHHHccccccHHHHccccccccccccEccccccccHccccccccccccccccEEEEEEcccccccHHHHcccccEEEccHHHHHHHHHHHHHHcccccHHHHEHHHHHccccEccccccEEEEEEEEccccccccccEEEEEccccccccccccccHHHHHHHHHccccccccccccccEEEEcccHHHHHHHHHHHHHHcccccccccEccEEEEEEEEcHHHHHHHcHHHHccccccccEEcHHEEEEEEcccEEccccc
mpynndfcsLVNQVFkepinglfysgytllptptkavhgslletmpynndfcSLVNQVFkepinglfysgytllptptkavhgslfkFTLWFRTIlnfnpfcpisqltqpikrpVWFVYagmgsqwpgMARELMWFAPFRQAIFECDRVYRPLGLDIVKIitsddpttfdDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAvgiepdgylghslgengvayadGCFDIREACLGgyargyaskvyklekpglmvsvglnykdltdlppsvdiachnsddnttisgaqedvEPYLEILKAKNIFYRVVNSSFIayhsrqvkplAPKVLELFQQAVQnpkkrsakwisssipeeewnsplaqyssaeYHVNNFLHTVRFTeacayipenaiVIEVAPHGLMQALLRRttkdgcvniplcrrqtespANFLLAALGQLhmnglrpniealyepdsfpvprgtpclspcifwnheddwdsgiapniqnnevteVDLLNKEYRALFSHqvngvvipplsLFLVDVYEKLCAQHhkngldetfvcEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELsedgvpvfpSMLREFIMSTnqisnlnpgchaqiVYNGNLMVYLDTILKIKVFLELsedgvpvfpSMLREFIMSTnqisnlnpvflelsedevpvfpSMLREFIMSTkhisnlnp
MPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFImstkhisnlnp
MPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFIMSTKHISNLNP
****NDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAV**********************PLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFIM**********
**********************************************YNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWF**********************VWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKV****KPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLEL***************ISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDS**********V**VDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNP******EDEVPVFPSMLREFIMSTKHISNLN*
MPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAV************SSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFIMSTKHISNLNP
*PYNNDFCSLVNQVF************TLLPTPTKAVHGSLLE*MPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFIMSTKHISNL**
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SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTNQISNLNPVFLELSEDEVPVFPSMLREFIMSTKHISNLNP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query700 2.2.26 [Sep-21-2011]
P19096 2504 Fatty acid synthase OS=Mu yes N/A 0.688 0.192 0.370 2e-92
P12785 2505 Fatty acid synthase OS=Ra yes N/A 0.677 0.189 0.371 3e-92
P49327 2511 Fatty acid synthase OS=Ho yes N/A 0.655 0.182 0.359 6e-90
P12276 2512 Fatty acid synthase OS=Ga yes N/A 0.778 0.216 0.322 7e-87
Q71SP7 2513 Fatty acid synthase OS=Bo yes N/A 0.73 0.203 0.325 3e-84
Q4WAZ9 4007 Nonribosomal peptide synt no N/A 0.398 0.069 0.274 3e-16
B0G0Z9 2924 Probable polyketide synth yes N/A 0.404 0.096 0.257 4e-16
Q86AE3 2931 Probable polyketide synth no N/A 0.391 0.093 0.264 8e-16
B0G100 2513 Probable polyketide synth no N/A 0.404 0.112 0.263 2e-15
Q55DM7 3010 Probable polyketide synth no N/A 0.291 0.067 0.294 2e-15
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2 Back     alignment and function desciption
 Score =  340 bits (872), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/535 (37%), Positives = 293/535 (54%), Gaps = 53/535 (9%)

Query: 22  LFYSGYTLLPTPTKAVHGSLLETMPYNND--FCSLVNQVFKEPINGLFYSGYTLLPTPTK 79
           L  SG TL     +AV   L +   ++ D  F S++N +   P   + + GYT+L     
Sbjct: 424 LHASGRTL-----EAVQDLLEQGRQHSQDLAFVSMLNDIAATPTAAMPFRGYTVL----- 473

Query: 80  AVHGSLFKFTLWFRTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPF 139
            V G + +                  Q     KRP+WF+ +GMG+QW GM   LM    F
Sbjct: 474 GVEGRVQEV-----------------QQVSTNKRPLWFICSGMGTQWRGMGLSLMRLDSF 516

Query: 140 RQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIG 199
           R++I   D   +PLG+ +  ++ S D  TFDDI+++FV++                 +I 
Sbjct: 517 RESILRSDEAVKPLGVKVSDLLLSTDERTFDDIVHAFVSLTAI--------------QIA 562

Query: 200 LTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMV 259
           L ++L +VG++PDG +GHSLGE    YADGC   REA L  Y RG   K   L  PG M 
Sbjct: 563 LIDLLTSVGLKPDGIIGHSLGEVACGYADGCLSQREAVLAAYWRGQCIKDAHL-PPGSMA 621

Query: 260 SVGLNYKDLTD-LPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIA 318
           +VGL++++     P  V  ACHNS+D  TISG Q  V  ++E LK + +F + V +  +A
Sbjct: 622 AVGLSWEECKQRCPAGVVPACHNSEDTVTISGPQAAVNEFVEQLKQEGVFAKEVRTGGLA 681

Query: 319 YHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLH 378
           +HS  ++ +AP +L+  ++ ++ P+ RSA+W+S+SIPE +W S LA+ SSAEY+VNN + 
Sbjct: 682 FHSYFMEGIAPTLLQALKKVIREPRPRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVS 741

Query: 379 TVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALG 438
            V F EA  +IPE+A+V+E+APH L+QA+L+R  K  C  IPL +R  +    F L  LG
Sbjct: 742 PVLFQEALWHIPEHAVVLEIAPHALLQAVLKRGVKSSCTIIPLMKRDHKDNLEFFLTNLG 801

Query: 439 QLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNN------EV 492
           ++H+ G+  N  AL+ P  FP PRGTP +SP I W+H   WD  +A +  N        V
Sbjct: 802 KVHLTGINVNPNALFPPVEFPAPRGTPLISPHIKWDHSQTWDVPVAEDFPNGSSSSSATV 861

Query: 493 TEVDLLNKE-YRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEE 546
             +D   +     L  H ++G VI P + +L  V++ L A+     L+ET V  E
Sbjct: 862 YSIDASPESPDHYLVDHCIDGRVIFPGTGYLCLVWKTL-ARSLGLSLEETPVVFE 915
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 1EC: 4
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 Back     alignment and function description
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 Back     alignment and function description
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 Back     alignment and function description
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1 Back     alignment and function description
>sp|Q4WAZ9|NRP14_ASPFU Nonribosomal peptide synthetase 14 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=NRPS14 PE=2 SV=2 Back     alignment and function description
>sp|B0G0Z9|PKS6_DICDI Probable polyketide synthase 6 OS=Dictyostelium discoideum GN=pks6 PE=3 SV=1 Back     alignment and function description
>sp|Q86AE3|PKS9_DICDI Probable polyketide synthase 9/36 OS=Dictyostelium discoideum GN=pks9 PE=2 SV=1 Back     alignment and function description
>sp|B0G100|PKS7_DICDI Probable polyketide synthase 7 OS=Dictyostelium discoideum GN=pks7 PE=3 SV=1 Back     alignment and function description
>sp|Q55DM7|PKS2_DICDI Probable polyketide synthase 2 OS=Dictyostelium discoideum GN=pks2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query700
328703972 2090 PREDICTED: fatty acid synthase-like [Acy 0.838 0.280 0.375 1e-118
328703181 2201 PREDICTED: fatty acid synthase-like [Acy 0.642 0.204 0.431 1e-109
328703183 2215 PREDICTED: fatty acid synthase-like [Acy 0.675 0.213 0.387 1e-106
91078002 2153 PREDICTED: similar to p270 [Tribolium ca 0.707 0.229 0.383 1e-105
383856217 2420 PREDICTED: fatty acid synthase-like [Meg 0.645 0.186 0.402 1e-105
328776933 2394 PREDICTED: fatty acid synthase-like isof 0.825 0.241 0.343 1e-104
345491206 1948 PREDICTED: fatty acid synthase-like [Nas 0.75 0.269 0.397 1e-104
328703189 1899 PREDICTED: hypothetical protein LOC10056 0.677 0.249 0.388 1e-103
156549726 2406 PREDICTED: fatty acid synthase-like [Nas 0.867 0.252 0.351 1e-103
350407733 2418 PREDICTED: fatty acid synthase-like [Bom 0.857 0.248 0.339 1e-103
>gi|328703972|ref|XP_001942950.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/664 (37%), Positives = 358/664 (53%), Gaps = 77/664 (11%)

Query: 42   LETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPF 101
            ++++P ++++  L+   F E I G F+ GY +L        G         + I  FN  
Sbjct: 447  VKSLPRDDEYLGLIQNAFSENITGHFHRGYAVLNEEASPTFG--------VQEIGEFN-- 496

Query: 102  CPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKII 161
                       RPVWFV+AGMGSQWPGMA +LM    F  ++  CD+  RP+G DI  I+
Sbjct: 497  -----------RPVWFVFAGMGSQWPGMASDLMEIPCFADSVKRCDKYIRPIGYDIFDIL 545

Query: 162  TSDDPTTFDDI-LNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLG 220
            T+ DP       + SF+AI T H              I   ++L  +GI PD   GHSLG
Sbjct: 546  TNPDPEVLKQKPMISFLAITTMH--------------IAFVDLLAKLGIHPDFMFGHSLG 591

Query: 221  ENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACH 280
            ENG AYADGCF   E  +  YARG  S+  K EK GLM +VGLNY+++ DLP S+DI CH
Sbjct: 592  ENGCAYADGCFSTYETLMAAYARGKVSEFLKPEK-GLMAAVGLNYQNIPDLPSSIDIGCH 650

Query: 281  NSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQ 340
            NS+DN T+SG  +D+E YLE LK +N+F R VNS+ IAYHSR V+  A  V +  ++AV 
Sbjct: 651  NSEDNVTLSGPSDDMENYLETLKKRNVFVRTVNSNGIAYHSRLVRRQAEFVQKFIEKAVP 710

Query: 341  NPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAP 400
            NPKKRS++WIS+SIPE  WNS LAQ+SS +YH NNF  TV F+EAC  IP+N IVIE+AP
Sbjct: 711  NPKKRSSRWISTSIPEANWNSELAQWSSGKYHANNFKKTVYFSEACQKIPKNVIVIEIAP 770

Query: 401  HGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPV 460
            HGL Q +L+      C  + + +R ++SP    L  LG+L+ +GL  N++ +Y P  +PV
Sbjct: 771  HGLFQGILKSALDSSCKIVSVAKRGSKSPLKHFLTTLGELYSSGLHFNLDTIYPPPEYPV 830

Query: 461  PRGTPCLSPCIFWNHEDDWDSGIAPNIQNNEVTEVDLLNKEYRALFSHQVNGVVIPPLSL 520
             RGTP L+P + WNHE+ W         N++  ++ L +K  R L  H+VN  V+ PLS 
Sbjct: 831  SRGTPSLAPLVSWNHEETWPINTYYGNSNSDYVQLCLRDKTSRHLLGHKVNDAVVVPLSF 890

Query: 521  FLVDVYEKL-------CAQHHKNGLDETFVCEEYKMKSLVEVTSTGCHAQIVYNGNLMVY 573
            F+ +V + L         + H+   +  FV     + S  E  S G + QI         
Sbjct: 891  FITEVLKSLENKQSAILNKSHQTIFENVFV--HTPLISTAE-ESNGFYTQIQPGTGSFEV 947

Query: 574  LDT---ILKIKVFLELSEDGVPVFPSMLREF--------------IMSTNQISNLNPGCH 616
            +++   +L   V+ + S   +   P    E               + S N I+   P C 
Sbjct: 948  IESRHVLLSGLVYTDDSNHLISPEPPTDYEVNIENEWISDNEIYKVFSENNINFSTPYCT 1007

Query: 617  AQ------------IVYNGNLMVYLDTILKIKVFLEL-SEDGVPVFPSMLREFIMSTNQI 663
             Q            I +  +L + L++++++K+F +L S   +P+ PS  R  ++ +  I
Sbjct: 1008 IQKILIHDKGFLANIFWKNDLNINLNSMMQLKMFADLQSYHDLPLLPSWFRSLVIDSEII 1067

Query: 664  SNLN 667
             N+N
Sbjct: 1068 KNIN 1071

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328703181|ref|XP_001944600.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328703183|ref|XP_001944653.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|91078002|ref|XP_969531.1| PREDICTED: similar to p270 [Tribolium castaneum] gi|270001419|gb|EEZ97866.1| hypothetical protein TcasGA2_TC000238 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|383856217|ref|XP_003703606.1| PREDICTED: fatty acid synthase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328776933|ref|XP_395426.4| PREDICTED: fatty acid synthase-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|345491206|ref|XP_001607841.2| PREDICTED: fatty acid synthase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|328703189|ref|XP_003242120.1| PREDICTED: hypothetical protein LOC100569297, partial [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|156549726|ref|XP_001605700.1| PREDICTED: fatty acid synthase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350407733|ref|XP_003488176.1| PREDICTED: fatty acid synthase-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query700
RGD|620665 2505 Fasn "fatty acid synthase" [Ra 0.598 0.167 0.397 4.5e-87
UNIPROTKB|P12785 2505 Fasn "Fatty acid synthase" [Ra 0.598 0.167 0.397 4.5e-87
MGI|MGI:95485 2504 Fasn "fatty acid synthase" [Mu 0.617 0.172 0.393 4.9e-85
UNIPROTKB|E1BWG0 2446 FASN "Fatty acid synthase" [Ga 0.584 0.167 0.383 7.2e-84
UNIPROTKB|F1N8A8 2512 FASN "Fatty acid synthase" [Ga 0.584 0.162 0.383 8.2e-84
UNIPROTKB|E1BW07 2513 FASN "Fatty acid synthase" [Ga 0.584 0.162 0.383 8.3e-84
UNIPROTKB|P49327 2511 FASN "Fatty acid synthase" [Ho 0.575 0.160 0.396 2.5e-83
UNIPROTKB|P12276 2512 FASN "Fatty acid synthase" [Ga 0.584 0.162 0.381 2.8e-83
FB|FBgn0040001 2394 CG17374 [Drosophila melanogast 0.662 0.193 0.370 4.6e-82
ZFIN|ZDB-GENE-030131-7802 2514 fasn "fatty acid synthase" [Da 0.514 0.143 0.401 1.7e-81
RGD|620665 Fasn "fatty acid synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
 Score = 828 (296.5 bits), Expect = 4.5e-87, Sum P(4) = 4.5e-87
 Identities = 176/443 (39%), Positives = 263/443 (59%)

Query:   112 KRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDD 171
             +RP+WF+ +GMG+QW GM   LM    FR++I   D   +PLG+ +  ++ S D  TFDD
Sbjct:   489 QRPLWFICSGMGTQWRGMGLSLMRLDSFRESILRSDEALKPLGVKVSDLLLSTDEHTFDD 548

Query:   172 ILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCF 231
             I++SFV++                 +I L ++L ++G++PDG +GHSLGE    YADGC 
Sbjct:   549 IVHSFVSLTAI--------------QIALIDLLTSMGLKPDGIIGHSLGEVACGYADGCL 594

Query:   232 DIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTD-LPPSVDIACHNSDDNTTISG 290
               REA L  Y RG   K   L   G M +VGL++++     PP V  ACHNS+D  TISG
Sbjct:   595 SQREAVLAAYWRGQCIKDANLPA-GSMAAVGLSWEECKQRCPPGVVPACHNSEDTVTISG 653

Query:   291 AQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWI 350
              Q  V  ++E LK + +F + V +  +A+HS  ++ +AP +L+  ++ ++ P+ RSA+W+
Sbjct:   654 PQAAVNEFVEQLKQEGVFAKEVRTGGLAFHSYFMEGIAPTLLQALKKVIREPRPRSARWL 713

Query:   351 SSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRR 410
             S+SIPE +W S LA+ SSAEY+VNN +  V F EA  ++PE+A+V+E+APH L+QA+L+R
Sbjct:   714 STSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKR 773

Query:   411 TTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPC 470
               K  C  IPL +R  +    F L  LG++H+ G+  N  AL+ P  FPVPRGTP +SP 
Sbjct:   774 GVKPSCTIIPLMKRDHKDNLEFFLTNLGKVHLTGIDINPNALFPPVEFPVPRGTPLISPH 833

Query:   471 IFWNHEDDWDSGIAPNIQNNE------VTEVDLLNKEY-RALFSHQVNGVVIPPLSLFLV 523
             I W+H   WD  +A +  N        V  +D  ++     L  H ++G V+ P + +L 
Sbjct:   834 IKWDHSQTWDIPVAEDFPNGSSSSSATVYNIDASSESSDHYLVDHCIDGRVLFPGTGYLY 893

Query:   524 DVYEKLCAQHHKNGLDETFVCEE 546
              V++ L A+     L+ET V  E
Sbjct:   894 LVWKTL-ARSLSLSLEETPVVFE 915
GO:0004312 "fatty acid synthase activity" evidence=IMP;IDA
GO:0004313 "[acyl-carrier-protein
GO:0004314 "[acyl-carrier-protein
GO:0004315 "3-oxoacyl-[acyl-carrier-protein
GO:0004316 "3-oxoacyl-[acyl-carrier-protein
GO:0004317 "3-hydroxypalmitoyl-[acyl-carrier-protein
GO:0004319 "enoyl-[acyl-carrier-protein
GO:0004320 "oleoyl-[acyl-carrier-protein
GO:0005737 "cytoplasm" evidence=ISO
GO:0005739 "mitochondrion" evidence=IEA;ISO
GO:0005794 "Golgi apparatus" evidence=IEA;ISO
GO:0005886 "plasma membrane" evidence=IEA;ISO
GO:0006084 "acetyl-CoA metabolic process" evidence=IDA
GO:0006633 "fatty acid biosynthetic process" evidence=IMP
GO:0008144 "drug binding" evidence=IDA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=TAS
GO:0016295 "myristoyl-[acyl-carrier-protein
GO:0016296 "palmitoyl-[acyl-carrier-protein
GO:0042470 "melanosome" evidence=IEA
GO:0042587 "glycogen granule" evidence=IEA;ISO
GO:0042802 "identical protein binding" evidence=IPI
GO:0042803 "protein homodimerization activity" evidence=IDA
GO:0047451 "3-hydroxyoctanoyl-[acyl-carrier-protein
GO:0070402 "NADPH binding" evidence=IDA
GO:0071353 "cellular response to interleukin-4" evidence=ISO
UNIPROTKB|P12785 Fasn "Fatty acid synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:95485 Fasn "fatty acid synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BWG0 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N8A8 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW07 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P49327 FASN "Fatty acid synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P12276 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0040001 CG17374 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7802 fasn "fatty acid synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query700
pfam00698319 pfam00698, Acyl_transf_1, Acyl transferase domain 3e-57
smart00827298 smart00827, PKS_AT, Acyl transferase domain in pol 4e-56
COG33211061 COG3321, COG3321, Polyketide synthase modules and 4e-29
COG0331310 COG0331, FabD, (acyl-carrier-protein) S-malonyltra 3e-19
TIGR00128290 TIGR00128, fabD, malonyl CoA-acyl carrier protein 3e-12
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 2e-08
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information 
 Score =  196 bits (501), Expect = 3e-57
 Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 41/346 (11%)

Query: 116 WFVYAGMGSQWPGMARELMWFAP-FRQAIFECDRVYRP-LGLDIVKIITSDDPTTFDDIL 173
            FV++G GSQW GM  +L+  +P F  AI  CD  ++P  G  ++ ++ ++     + + 
Sbjct: 1   VFVFSGQGSQWAGMGMDLLKTSPVFAAAIARCDEAFKPQYGFSVLDVLRNNPEGLLERVD 60

Query: 174 NSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDI 233
               A+                 +I L  +LR+ G+ P   +GHSLGE   A   G   +
Sbjct: 61  VVQPAL--------------FAMQIALAALLRSYGVTPAAVVGHSLGEIAAAVVAGALSL 106

Query: 234 REACLGGYARGYASKVYK-LEKPGLMVSVGLNYKDLTDL---PPSVDIACHNSDDNTTIS 289
            EA L    R   S++ + L  PG M +VGL  +++  L   P  V +A  NS  +  ++
Sbjct: 107 EEAALVVALR---SRLMRQLAGPGGMAAVGLPAEEVEQLARWPDRVVVAIVNSPRSVVVA 163

Query: 290 GAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQN--PKKRSA 347
           G QE ++ ++E ++A+ +  RV+     A HS QV+ +      L            R  
Sbjct: 164 GPQEALDEFVERVEARGVRARVIAVD-YASHSPQVEAIGD---ALALALADIAPRTPRVP 219

Query: 348 KWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYI--PENAIVIEVAPHGLMQ 405
            + ++S           +   AEY   N  + VRF EA          + +EV+PH ++ 
Sbjct: 220 FYSTTSGDPS-----DQRELDAEYWYRNLRNPVRFAEAVLAAAEQGYLVFVEVSPHPVLL 274

Query: 406 ALLRRTTKDG----CVNIPLCRRQTESPANFLLAALGQLHMNGLRP 447
           A +  T K         +    R       F L AL   H+ G+  
Sbjct: 275 AAVEETLKSADGKDATLVGTLIRDQGDLVTF-LYALAVAHLTGVAV 319

Length = 319
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 700
KOG1202|consensus 2376 100.0
PF00698318 Acyl_transf_1: Acyl transferase domain; InterPro: 100.0
COG33211061 Polyketide synthase modules and related proteins [ 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
TIGR02816538 pfaB_fam PfaB family protein. The protein PfaB is 100.0
TIGR00128290 fabD malonyl CoA-acyl carrier protein transacylase 100.0
smart00827298 PKS_AT Acyl transferase domain in polyketide synth 100.0
PLN02752343 [acyl-carrier protein] S-malonyltransferase 100.0
TIGR03131295 malonate_mdcH malonate decarboxylase, epsilon subu 100.0
COG0331310 FabD (acyl-carrier-protein) S-malonyltransferase [ 100.0
KOG2926|consensus386 100.0
PF14765295 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_ 99.69
smart00826167 PKS_DH PKS_DH. 98.34
TIGR028132582 omega_3_PfaA polyketide-type polyunsaturated fatty 97.77
cd07198172 Patatin Patatin-like phospholipase. Patatin is a s 87.85
cd07205175 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi 82.7
cd07207194 Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho 82.54
COG1752306 RssA Predicted esterase of the alpha-beta hydrolas 81.2
cd07209215 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim 80.86
cd07229391 Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly 80.11
>KOG1202|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.1e-85  Score=726.04  Aligned_cols=589  Identities=35%  Similarity=0.606  Sum_probs=537.5

Q ss_pred             cceeEeccCChhHHHHHH--HhhCCCCchhHHHHHHHhhcCCCCCCceEEEEcCCcccccccccchhhhHHHhhhccCCC
Q psy8296          24 YSGYTLLPTPTKAVHGSL--LETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPF  101 (700)
Q Consensus        24 ~~~~~lsa~~~~a~~~~~--l~~~~~~~~~~~~l~~la~t~r~~~~~R~~~v~~~~~~l~~~~l~~~~~~~~~~l~~~~~  101 (700)
                      ......|.|++||+++.+  ...+.+|.++.++++|++......||+|+|.|.++....            .        
T Consensus       430 ~~l~~~sgRT~eAVeqll~~~~~n~~D~~~l~llndi~s~p~~~~pFRGY~vl~~e~~~------------~--------  489 (2376)
T KOG1202|consen  430 LRLVRASGRTPEAVEQLLEQALRNSDDLELLSLLNDIASVPAPLHPFRGYAVLGGERGG------------P--------  489 (2376)
T ss_pred             ceeeecCCCCHHHHHHHHHHHhcccchHHHHHHHHHHhcCCccCCcccceEEeccccCC------------c--------
Confidence            344555999999999983  456677889999999999999999999999999876433            2        


Q ss_pred             CCcccccCCCCCCEEEEEcCCCCChhhhHHHHhhcHHHHHHHHHHHhhhcccCCChhhhccCCCCCcchhhhhhhHhhhh
Q psy8296         102 CPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVT  181 (700)
Q Consensus       102 ~~~~~~~~~~~~~v~fvF~GQGsq~~gmg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~~~~~~~~q~~l~a  181 (700)
                       ++ ...+...+|+.|+++|.|+||+||+++|++.+.||+.+.+|++.+++.|+++.+.|...++..+++..++...|.|
T Consensus       490 -ev-~~~~~~eRPiwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsitA  567 (2376)
T KOG1202|consen  490 -EV-QQVPAGERPIWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSITA  567 (2376)
T ss_pred             -ce-eecCCCCcceEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHHHH
Confidence             23 4556666899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccccccccchhhHHHHHHHHHHcCCCcCEEEeCChHHHHHHHHhcCCCHHHHHHHHHHHhHhhhhcccCCCCcEEEE
Q psy8296         182 CHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSV  261 (700)
Q Consensus       182 ~q~~~~~~~~~~~~~~~Ala~ll~~~Gi~P~~v~GHS~GE~aAa~~aG~lsl~dai~lv~~Rg~l~~~~~~~~~G~M~av  261 (700)
                      +|              +||.++|...||+||.++|||+||+.++|+-|++|.|+++.++|.||+.+.+...+ +|+|+||
T Consensus       568 iQ--------------iaLtDlLs~lgi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~-kGaMAAV  632 (2376)
T KOG1202|consen  568 IQ--------------IALTDLLSCLGIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLP-KGAMAAV  632 (2376)
T ss_pred             HH--------------HHHHHHHHhcCCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCC-Ccchhhh
Confidence            99              99999999999999999999999999999999999999999999999998887777 9999999


Q ss_pred             cCCHHhHhC-CCCCceEeEecCCCcEEEecChhhHHHHHHHHhcCCeeEEEeccccCCCChhhHhhhHHHHHHHHhhhcc
Q psy8296         262 GLNYKDLTD-LPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQ  340 (700)
Q Consensus       262 ~~~~~~v~~-l~~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~~i~~~~L~v~~~afHS~~m~~~~~~~~~~l~~~~~  340 (700)
                      +++.|++.+ +++++.-+|+||.++|+|||+.+.+.++++.|+++|||++.++.+++||||+.|+.+.+++++.++.+..
T Consensus       633 GLsWEq~~~~~P~~~~paCHNs~D~~TiSGp~a~v~~~v~qL~~~gvFak~V~t~G~aFHS~~m~a~~p~l~~~l~k~i~  712 (2376)
T KOG1202|consen  633 GLSWEQCKSRCPPDVVPACHNSKDNVTISGPQASVFAFVEQLRAEGVFAKEVRTGGYAFHSPYMEAAAPPLRQSLEKVIP  712 (2376)
T ss_pred             cCCHHHHhccCCCcccccccCCCCceEecCChHHHHHHHHHhhhcCeeeeEecCCCccccCHHHHhhChHHHHHHHHhcC
Confidence            999999999 9999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCceEEeCCCCCCccCCccccCCChhHHHHhhccccchHHHHhhcccCcEEEEECCChhhHHHHHhhhcCCCceee
Q psy8296         341 NPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIP  420 (700)
Q Consensus       341 ~~~~p~~~~~S~~~g~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~~iEiGP~~~L~~~~~~~l~~~~~~~~  420 (700)
                      .|++.+.+|+|+...+..|.++.....+++|.++|+++||.|.+|++.+.++.+.|||.||+.+...+|+.+++.+++++
T Consensus       713 epK~rsarWlSTSipEa~W~s~la~tsSA~Y~vnNl~SPVLF~eAlq~vP~nAv~vEiAPH~LlqAiLkRsL~p~~t~v~  792 (2376)
T KOG1202|consen  713 EPKPRSARWLSTSIPEAQWHSSLARTSSAEYHVNNLVSPVLFHEALQHVPENAVVVEIAPHGLLQAILKRSLKPSCTNVS  792 (2376)
T ss_pred             CCCCcccchhhccCChhhhcChhhhhcchhhhhhccccHHHHHHHHHhCcccceEEEecchHHHHHHHHhhcCCccceeh
Confidence            88999999999999999898887778899999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCchhhHHHHhhhhhhcCCCCchhhhcCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCC--ceeEEEecc
Q psy8296         421 LCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQN--NEVTEVDLL  498 (700)
Q Consensus       421 ~l~r~~~~~~~~ll~~l~~L~~~G~~vd~~~l~~~~~~~~~~~~~~~LP~Y~f~~~~~W~~~~~~~~~~--~~~~~~~l~  498 (700)
                      .++|++.+..+.+|..+|+||.+|++++...++++.++|+++++|+.-|..-|||+..|..++......  ..+++++++
T Consensus       793 Lmkr~h~~NlEffL~~lgrly~aG~~~qi~~l~p~i~ypv~rGTPmi~~lv~WDHtq~W~~~~f~~gs~s~~a~~niD~~  872 (2376)
T KOG1202|consen  793 LMKRGHRNNLEFFLAGLGRLYAAGIQPQILALFPPIEYPVPRGTPMIGPLVKWDHTQKWLVPKFPGGSGSSAAIYNIDLS  872 (2376)
T ss_pred             hhcCcccccHHHHHHHHHHHHHccCCccceeccCCCcccCCCCCcCcccccCccccccccccccCCCCCccceEEEccCC
Confidence            999999999999999999999999999999999999999999999999999999999999887443322  778899999


Q ss_pred             cccccccccceecCeeccchhhHHHHHHHHHHHhcccCCCceeEEEecCccceeEEE------------eCCceeEEEEE
Q psy8296         499 NKEYRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEV------------TSTGCHAQIVY  566 (700)
Q Consensus       499 ~~~~p~L~dH~V~g~~v~Paa~ylemA~eA~~~~~~~~~~~~~~~l~dv~~~~~l~l------------~~~~~~F~I~S  566 (700)
                      .++..||.||.++|+++||++||+.+||...++..|.+....++.++|+.|+++..+            -++++.|||++
T Consensus       873 ~edd~yL~~HtiDGRvLfPaTGymtlaW~tlak~qGldy~ktPVvfEdvv~h~ATIL~k~~vvkl~v~~~~gs~aFEi~e  952 (2376)
T KOG1202|consen  873 KEDDHYLADHTIDGRVLFPATGYMTLAWKTLAKPQGLDYEKTPVVFEDVVFHRATILPKTGVVKLEVNLFPGSGAFEICE  952 (2376)
T ss_pred             ccccceeccceecceEEeccccchhHHHHHHhhhccCCcccCceeeeeeeeeeeEeecCCceEEEEEEEcCCCcceEEec
Confidence            777889999999999999999999999999999999888889999999999995444            35678999999


Q ss_pred             cCeEee------cCC------------------CccHHHHHHHHHhCCC---CCCcccccccccccccccCCCCceEEEE
Q psy8296         567 NGNLMV------YLD------------------TILKIKVFLELSEDGV---PVFPSMLREFIMSTNQISNLNPGCHAQI  619 (700)
Q Consensus       567 ~~~~~~------~~~------------------~~~~~~~Y~~l~~~G~---p~Fqgl~~i~~~~~~~~~~~~~~~~a~i  619 (700)
                      ++++.+      +++                  ....++.|++|+-+||   +.||||-     +.     ...+..|++
T Consensus       953 ~~~l~~SGki~i~ed~~~~~~~l~e~~~~~~a~eL~t~dvYKElrLRGYdYg~~FqGI~-----~s-----~~s~~tG~L 1022 (2376)
T KOG1202|consen  953 NGSLVVSGKIYIPEDPDPELLDLEESPTSAPAEELATADVYKELRLRGYDYGGHFQGIL-----ES-----DLSGDTGRL 1022 (2376)
T ss_pred             CCcEEEeeeEeccCCCchhhcccccCCCcchhhhhhHHHHHHHHHhcccccchhhhhhh-----hh-----ccccccceE
Confidence            776543      221                  1234899999999999   9999999     55     667889999


Q ss_pred             eecCCchhHHHHHHhhHhhhhcCCCCceeccccccEEEEccC
Q psy8296         620 VYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMSTN  661 (700)
Q Consensus       620 ~~~~~hP~~LD~~lQ~~~~a~~~~~~~~~vP~~i~~l~i~~~  661 (700)
                      .|.++|.+++|.+||..+++...  .+.++||+|+++.|.+.
T Consensus      1023 ~W~dNWvsFmDtmLQ~siLs~~~--~~LylPTrv~~~~IdP~ 1062 (2376)
T KOG1202|consen 1023 QWKDNWVSFMDTMLQFSILSSAK--RELYLPTRVERAHIDPA 1062 (2376)
T ss_pred             EEeccHHHHHHHHHHHHHHhhcc--cceecccceeeeeeChH
Confidence            99999999999999998887553  57899999999999643

>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG2926|consensus Back     alignment and domain information
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A Back     alignment and domain information
>smart00826 PKS_DH PKS_DH Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>cd07198 Patatin Patatin-like phospholipase Back     alignment and domain information
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 Back     alignment and domain information
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 Back     alignment and domain information
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli Back     alignment and domain information
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query700
3hhd_A965 Structure Of The Human Fatty Acid Synthase Ks-Mat D 8e-91
2vz8_A 2512 Crystal Structure Of Mammalian Fatty Acid Synthase 4e-86
2jfk_A433 Structure Of The Mat Domain Of Human Fas With Malon 8e-84
2jfd_A425 Structure Of The Mat Domain Of Human Fas Length = 4 5e-81
2qo3_A915 Crystal Structure Of [ks3][at3] Didomain From Modul 1e-13
3tzw_A491 Crystal Structure Of A Fragment Containing The Acyl 5e-10
2hg4_A917 Structure Of The Ketosynthase-acyltransferase Didom 2e-09
3rgi_A286 Trans-Acting Transferase From Disorazole Synthase L 1e-06
3sbm_A281 Trans-Acting Transferase From Disorazole Synthase I 2e-06
4amo_A421 Crystal Structure Of The Acyltransferase Domain Of 1e-05
4amn_A421 Crystal Structure Of The Acyltransferase Domain Of 4e-05
4amm_A401 Crystal Structure Of The Acyltransferase Domain Of 6e-05
3ezo_A318 Crystal Structure Of Acyl-Carrier-Protein S- Malony 9e-05
3im8_A307 Crystal Structure Of Mcat From Streptococcus Pneumo 4e-04
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 Back     alignment and structure 
Iteration: 1

 Score =  331 bits (849), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 182/506 (35%), Positives = 277/506 (54%), Gaps = 47/506 (9%)
Query: 35  KAVHGSLLETMPYNND--FCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWF 92
           +AV   L + + ++ D  F S++N +   P   + + GY                     
Sbjct: 434 EAVQKLLEQGLRHSQDLAFLSMLNDIAAVPATAMPFRGYA-------------------- 473
Query: 93  RTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRP 152
             +L      P  Q     +RP+WF+ +GMG+QW GM   LM    FR +I   D   +P
Sbjct: 474 --VLGGERGGPEVQQVPAGERPLWFICSGMGTQWRGMGLSLMRLDRFRDSILRSDEAVKP 531
Query: 153 LGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPD 212
            GL + +++ S D +TFDDI++SFV++                 +IGL ++L  +G+ PD
Sbjct: 532 FGLKVSQLLLSTDESTFDDIVHSFVSLTAI--------------QIGLIDLLSCMGLRPD 577
Query: 213 GYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTD-L 271
           G +GHSLGE    YADGC    EA L  Y RG   K   L  PG M +VGL++++     
Sbjct: 578 GIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHL-PPGAMAAVGLSWEECKQRC 636
Query: 272 PPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKV 331
           PP V  ACHNS D  TISG Q  V  ++E L+ + +F + V +  +A+HS  ++ +AP +
Sbjct: 637 PPGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFMEAIAPPL 696
Query: 332 LELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPE 391
           L+  ++ ++ PK RSA+W+S+SIPE +W+S LA+ SSAEY+VNN +  V F EA  ++PE
Sbjct: 697 LQELKKVIREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALWHVPE 756
Query: 392 NAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEA 451
           +A+V+E+APH L+QA+L+R  K  C  IPL ++       F LA +G+LH++G+  N  A
Sbjct: 757 HAVVLEIAPHALLQAVLKRGLKPSCTIIPLMKKDHRDNLEFFLAGIGRLHLSGIDANPNA 816
Query: 452 LYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNNE------VTEVDLLNKE-YRA 504
           L+ P  FP PRGTP +SP I W+H   WD   A +  N        +  +D  ++     
Sbjct: 817 LFPPVEFPAPRGTPLISPLIKWDHSLAWDVPAAEDFPNGSGSPSAAIYNIDTSSESPDHY 876
Query: 505 LFSHQVNGVVIPPLSLFLVDVYEKLC 530
           L  H ++G V+ P + +L  V++ L 
Sbjct: 877 LVDHTLDGRVLFPATGYLSIVWKTLA 902
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 Back     alignment and structure
>pdb|2JFK|A Chain A, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa Length = 433 Back     alignment and structure
>pdb|2JFD|A Chain A, Structure Of The Mat Domain Of Human Fas Length = 425 Back     alignment and structure
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 Back     alignment and structure
>pdb|3TZW|A Chain A, Crystal Structure Of A Fragment Containing The Acyltransferase Domain Of Pks13 From Mycobacterium Tuberculosis In The Orthorhombic Apoform At 2.6 A Length = 491 Back     alignment and structure
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 Back     alignment and structure
>pdb|3RGI|A Chain A, Trans-Acting Transferase From Disorazole Synthase Length = 286 Back     alignment and structure
>pdb|3SBM|A Chain A, Trans-Acting Transferase From Disorazole Synthase In Complex With Acetate Length = 281 Back     alignment and structure
>pdb|4AMO|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|4AMN|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|4AMM|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 401 Back     alignment and structure
>pdb|3EZO|A Chain A, Crystal Structure Of Acyl-Carrier-Protein S- Malonyltransferase From Burkholderia Pseudomallei 1710b Length = 318 Back     alignment and structure
>pdb|3IM8|A Chain A, Crystal Structure Of Mcat From Streptococcus Pneumoniae Length = 307 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query700
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 1e-120
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 1e-116
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 1e-36
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 3e-36
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 6e-32
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 2e-11
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 6e-11
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 9e-10
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 8e-09
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 3e-08
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 4e-08
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 6e-08
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 4e-07
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 4e-07
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 5e-07
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 9e-07
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 1e-06
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 2e-06
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 2e-06
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 1e-05
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 2e-05
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
 Score =  382 bits (983), Expect = e-120
 Identities = 170/438 (38%), Positives = 254/438 (57%), Gaps = 23/438 (5%)

Query: 93  RTILNFNPFCPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRP 152
             +L      P  Q     +RP+WF+ +GMG+QW GM   LM    FR +I   D   +P
Sbjct: 472 YAVLGGERGGPEVQQVPAGERPLWFICSGMGTQWRGMGLSLMRLDRFRDSILRSDEAVKP 531

Query: 153 LGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPD 212
            GL + +++ S D +TFDDI++SFV++              A++ IGL ++L  +G+ PD
Sbjct: 532 FGLKVSQLLLSTDESTFDDIVHSFVSLT-------------AIQ-IGLIDLLSCMGLRPD 577

Query: 213 GYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTD-L 271
           G +GHSLGE    YADGC    EA L  Y RG   K   L   G M +VGL++++     
Sbjct: 578 GIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPP-GAMAAVGLSWEECKQRC 636

Query: 272 PPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKV 331
           PP V  ACHNS D  TISG Q  V  ++E L+ + +F + V +  +A+HS  ++ +AP +
Sbjct: 637 PPGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFMEAIAPPL 696

Query: 332 LELFQQAVQNPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPE 391
           L+  ++ ++ PK RSA+W+S+SIPE +W+S LA+ SSAEY+VNN +  V F EA  ++PE
Sbjct: 697 LQELKKVIREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALWHVPE 756

Query: 392 NAIVIEVAPHGLMQALLRRTTKDGCVNIPLCRRQTESPANFLLAALGQLHMNGLRPNIEA 451
           +A+V+E+APH L+QA+L+R  K  C  IPL ++       F LA +G+LH++G+  N  A
Sbjct: 757 HAVVLEIAPHALLQAVLKRGLKPSCTIIPLMKKDHRDNLEFFLAGIGRLHLSGIDANPNA 816

Query: 452 LYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQNN------EVTEVDLLNKEYRA- 504
           L+ P  FP PRGTP +SP I W+H   WD   A +  N        +  +D  ++     
Sbjct: 817 LFPPVEFPAPRGTPLISPLIKWDHSLAWDVPAAEDFPNGSGSPSAAIYNIDTSSESPDHY 876

Query: 505 LFSHQVNGVVIPPLSLFL 522
           L  H ++G V+ P + +L
Sbjct: 877 LVDHTLDGRVLFPATGYL 894
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281 Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394 Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317 Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336 Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307 Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321 Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314 Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318 Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316 Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316 Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339 Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318 Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309 Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query700
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 100.0
3tzy_A491 Polyketide synthase PKS13; acyltransferase, long f 100.0
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 100.0
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 100.0
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 100.0
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 100.0
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 100.0
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 100.0
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 100.0
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 100.0
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 100.0
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 100.0
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 100.0
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 100.0
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 100.0
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 100.0
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3kg8_A308 CURJ; polyketide synthase, double hotdog fold, deh 99.86
3kg6_A285 CURF; polyketide synthase, double hotdog fold, deh 99.85
3kg9_A296 CURK; polyketide synthase, double hotdog fold, deh 99.85
3kg7_A293 CURH; polyketide synthase, double hotdog fold, deh 99.82
3el6_A313 Erythromycin dehydratase; dehydratase double hotdo 99.81
3hrq_A357 PKS, aflatoxin biosynthesis polyketide synthase; h 99.8
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 95.07
1fj2_A232 Protein (acyl protein thioesterase 1); alpha/beta 89.41
3qit_A286 CURM TE, polyketide synthase; thioesterase, alpha/ 81.92
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-93  Score=924.09  Aligned_cols=588  Identities=32%  Similarity=0.586  Sum_probs=496.6

Q ss_pred             cceeEeccCChhHHHHH--HHhhCCCCchhHHHHHHHhhcCCCCCCceEEEEcCCcccccccccchhhhHHHhhhccCCC
Q psy8296          24 YSGYTLLPTPTKAVHGS--LLETMPYNNDFCSLVNQVFKEPINGLFYSGYTLLPTPTKAVHGSLFKFTLWFRTILNFNPF  101 (700)
Q Consensus        24 ~~~~~lsa~~~~a~~~~--~l~~~~~~~~~~~~l~~la~t~r~~~~~R~~~v~~~~~~l~~~~l~~~~~~~~~~l~~~~~  101 (700)
                      ..++++||+|+++|+++  .+..+..+.++.+++.++++++|++|+||+++++.+..++            .        
T Consensus       421 ~~~~~~sa~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~------------~--------  480 (2512)
T 2vz8_A          421 PRLLQASGRTLEAVQTLLEQGLRHSRDLAFVGMLNEIAAVSPVAMPFRGYAVLGGEAGS------------Q--------  480 (2512)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHTTTTCHHHHHHHHHHHCCCTTTCCEEEEEEESSTTCC------------E--------
T ss_pred             ceeeeecCCCHHHHHHHHHHHHhhhcccchhhHHHHHHhcccccCceeeeeeccCcchh------------h--------
Confidence            45789999999999998  4444544556666789999999999999998888765544            1        


Q ss_pred             CCcccccCCCCCCEEEEEcCCCCChhhhHHHHhhcHHHHHHHHHHHhhhcccCCChhhhccCCCCCcchhhhhhhHhhhh
Q psy8296         102 CPISQLTQPIKRPVWFVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVT  181 (700)
Q Consensus       102 ~~~~~~~~~~~~~v~fvF~GQGsq~~gmg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~~~~~~~~q~~l~a  181 (700)
                       .. ......+++++|||||||+||+|||++||++|+||+.+++|+++++.+||++.++++..++..++++.++||++|+
T Consensus       481 -~~-~~~~~~~~~v~fvF~GQGsQ~~gMg~~L~~~p~f~~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qpal~a  558 (2512)
T 2vz8_A          481 -EV-QQVPGSKRPVWFICSGMGAQWQGMGLSLMRLDRFRDSILRSDQALKPLGLRVSDLLLSTDEAVLDDIVSSFVSLTS  558 (2512)
T ss_dssp             -EE-EECCCSCCCEEEEECCSSCCCTTTTSSTTSSHHHHHHHHHHHHHHGGGTCCHHHHHHTCCHHHHHCHHHHHHHHHH
T ss_pred             -hh-hcccCCCCceEEEeCCCCCchHhHHHHHHhChHHHHHHHHHHHHHHHCCCCHHHHHhcCCccccccHHHHHHHHHH
Confidence             01 1122345689999999999999999999999999999999999999999999999987765557899999999999


Q ss_pred             hccccccccccchhhHHHHHHHHHHcCCCcCEEEeCChHHHHHHHHhcCCCHHHHHHHHHHHhHhhhhcccCCCCcEEEE
Q psy8296         182 CHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSV  261 (700)
Q Consensus       182 ~q~~~~~~~~~~~~~~~Ala~ll~~~Gi~P~~v~GHS~GE~aAa~~aG~lsl~dai~lv~~Rg~l~~~~~~~~~G~M~av  261 (700)
                      +|              |||+++|++|||+|++|+|||+|||+|||+||+||++||+++++.||++|++.. .++|+|++|
T Consensus       559 ~q--------------~al~~ll~~~Gi~P~~vvGHS~GEiaAa~~AG~lsleda~~lv~~Rg~~~~~~~-~~~G~M~av  623 (2512)
T 2vz8_A          559 IQ--------------IALIDLLTSLGLQPDGIIGHSLGEVACGYADGCLTQEEAVLSSYWRGYCIKEAN-VLPGAMAAV  623 (2512)
T ss_dssp             HH--------------HHHHHHHHHTTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEEE
T ss_pred             HH--------------HHHHHHHHHcCCEEEEEEecCHhHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcC-CCCceEEEe
Confidence            99              999999999999999999999999999999999999999999999999998753 347999999


Q ss_pred             cCCHHhHhC-CCCCceEeEecCCCcEEEecChhhHHHHHHHHhcCCeeEEEeccccCCCChhhHhhhHHHHHHHHhhhcc
Q psy8296         262 GLNYKDLTD-LPPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQ  340 (700)
Q Consensus       262 ~~~~~~v~~-l~~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~~i~~~~L~v~~~afHS~~m~~~~~~~~~~l~~~~~  340 (700)
                      +++.+++++ +.++++|||+|||+++||||+.++|+++.+.|+++|+++++|+|+++||||++|+|+.++|.+.++.+..
T Consensus       624 ~~~~~~~~~~~~~~v~iA~~Nsp~s~visG~~~ai~~~~~~l~~~g~~~~~L~v~~~AfHS~~m~~~~~~~~~~l~~~~~  703 (2512)
T 2vz8_A          624 GLSWEECKQRCPPGIVPACHNSKDTVTISGPQAAMSEFLQQLKREDVFVKEVRTGGIAFHSYFMESIAPTLLRQLRKVIL  703 (2512)
T ss_dssp             CSCHHHHHTTSCTTCCEEEECSSSCEEEEEEHHHHHHHHHHHHTTTCCEEEECCTTCCCSSGGGTTTHHHHHHHHHHHSC
T ss_pred             cCCHHHHHHhccCCeEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCceEEEcCCCCccccHHHHHhHHHHHHHHHHhccc
Confidence            999999999 8889999999999999999999999999999999999999999955899999999999999999999865


Q ss_pred             CCCCCCceEEeCCCCCCccCCccccCCChhHHHHhhccccchHHHHhhcccCcEEEEECCChhhHHHHHhhhcCCCceee
Q psy8296         341 NPKKRSAKWISSSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAIVIEVAPHGLMQALLRRTTKDGCVNIP  420 (700)
Q Consensus       341 ~~~~p~~~~~S~~~g~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~~iEiGP~~~L~~~~~~~l~~~~~~~~  420 (700)
                      .++++.++++|++++.........+..+++||++|+|+||+|.++++.+.+.++|||||||++|+++++++++....+++
T Consensus       704 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~fvEiGP~~~L~~~~~~~l~~~~~~~~  783 (2512)
T 2vz8_A          704 DPKPRSKRWLSTSIPEAQWQGSLARTFSAEYSVNNLVSPVLFQEALQHVPAHAVVVEIAPHALLQAVLKRSLESSCTIIP  783 (2512)
T ss_dssp             SCCBCCTTEECSSSCGGGTTSSSTTBCCHHHHHHHHHSCEEHHHHHTTSCSSCEEEECSSSCTTHHHHHHHSCTTSEEEC
T ss_pred             cCCCCCceEEEeecCCCcccCcccccCCHHHHHHHhhccccHHHHHHhhhcCCEEEEECCcHHHHHHHHHHhccCCcEEe
Confidence            44567788999999876443322235689999999999999999999999889999999999999999999987788999


Q ss_pred             cccCCCCCchhhHHHHhhhhhhcCCCCchhhhcCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCC------ceeEE
Q psy8296         421 LCRRQTESPANFLLAALGQLHMNGLRPNIEALYEPDSFPVPRGTPCLSPCIFWNHEDDWDSGIAPNIQN------NEVTE  494 (700)
Q Consensus       421 ~l~r~~~~~~~~ll~~l~~L~~~G~~vd~~~l~~~~~~~~~~~~~~~LP~Y~f~~~~~W~~~~~~~~~~------~~~~~  494 (700)
                      +++|++.++..++++++|+||++|++|||+.+|+...++..+++++.||+|||||++||.+++...++.      ...|.
T Consensus       784 ~l~r~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~lP~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~~  863 (2512)
T 2vz8_A          784 LMKKDHRDNLEFFLSNVGRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQAWDVPSAADFPSGSSCSSVAVYK  863 (2512)
T ss_dssp             SCCTTCSCHHHHHHHHHHHHHHHTCCCCGGGTSCCCCSSCCTTCCCSGGGCCCCCCSCCCCCCGGGSCCSCCCTTEEEEE
T ss_pred             eccCCCCCHHHHHHHHHHHHHHCCCcCCHHHhCCccccCccCCCcCCCCCCCCCCcccccCcccccccCCCCCCceEEEE
Confidence            999875678999999999999999999999999876555555667889999999999999875332222      34567


Q ss_pred             Eeccccc-ccccccceecCeeccchhhHHHHHHHHHHHhcccCCCceeEEEecCccceeEEEeCC------------cee
Q psy8296         495 VDLLNKE-YRALFSHQVNGVVIPPLSLFLVDVYEKLCAQHHKNGLDETFVCEEYKMKSLVEVTST------------GCH  561 (700)
Q Consensus       495 ~~l~~~~-~p~L~dH~V~g~~v~Paa~ylemA~eA~~~~~~~~~~~~~~~l~dv~~~~~l~l~~~------------~~~  561 (700)
                      .+++.+. .|||+||+|+|++||||++|++||++|+++..+......++.|+|+.|.+|+.++++            .++
T Consensus       864 ~~~~~~~~~~wl~~H~v~g~~~~P~~~y~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  943 (2512)
T 2vz8_A          864 FDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTLARALSQNLEETPVVFEDVTLHQATILPKTGTVSLEVRLLEASHA  943 (2512)
T ss_dssp             EECSTTSGGGGGGGCEETTEEECCHHHHHHHHHHHHHHHTTCCGGGCCEEEEEEEECSCCEECSSSEEEEEEEEETTTTE
T ss_pred             EEcccccCCchhccCeECCEEeeCcHHHHHHHHHHHHHhhccccccCCeEEEeeEEeeceeecCCCCEEEEEEEEcCCce
Confidence            7777666 899999999999999999999999999888765433334688999999999888653            257


Q ss_pred             EEEEEc-CeEee------c--------C-------------CCccHHHHHHHHHhCCC---CCCcccccccccccccccC
Q psy8296         562 AQIVYN-GNLMV------Y--------L-------------DTILKIKVFLELSEDGV---PVFPSMLREFIMSTNQISN  610 (700)
Q Consensus       562 F~I~S~-~~~~~------~--------~-------------~~~~~~~~Y~~l~~~G~---p~Fqgl~~i~~~~~~~~~~  610 (700)
                      |+|++. +..+.      .        .             .+++.++||+.|+..||   |.||+++++|.        
T Consensus       944 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~g~~yg~~F~~~~~~~~-------- 1015 (2512)
T 2vz8_A          944 FEVSDSNGSLIASGKVYQWESPDPKLFDTRAAVDPADSTAEFRLSQGDVYKDLRLRGYDYGPFFQLVLESDL-------- 1015 (2512)
T ss_dssp             EEEEETTCCEEEEEEEEECSSCCGGGGCCCCSSCCCCCSSSCEEEHHHHHHHHHHHTCCCCGGGCCEEEEET--------
T ss_pred             EEEecCCCcEEEEEEEEecCCCCccccccccccccccccccccCCHHHHHHHHHHhcCcCCchhcCeeeEEE--------
Confidence            888872 21111      0        0             01345799999999987   99999996522        


Q ss_pred             CCCceEEEEeecCCchhHHHHHHhhHhhhhcCCCCceeccccccEEEEcc
Q psy8296         611 LNPGCHAQIVYNGNLMVYLDTILKIKVFLELSEDGVPVFPSMLREFIMST  660 (700)
Q Consensus       611 ~~~~~~a~i~~~~~hP~~LD~~lQ~~~~a~~~~~~~~~vP~~i~~l~i~~  660 (700)
                      +  ...+++.++..||++||+|||+.+++..  ....+||++|++++|+.
T Consensus      1016 ~--~~~~~~~~~~~~~~~lD~~lq~~~~~~~--~~~~~~p~~i~~~~~~~ 1061 (2512)
T 2vz8_A         1016 E--GNRGRLQWNDSWVSFLDAMLHMSILAPG--QLGLYLPTRFTSIRIDP 1061 (2512)
T ss_dssp             T--SSEEEEEECSCHHHHHHHHHHHHHTCTT--CCSCEEECBCSCCEECH
T ss_pred             c--CceEEEecCCccchHHHHHHHHHHHhcc--CCcceecceEeEEEEec
Confidence            1  2367888888899999999998876643  34579999999999963
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula} Back     alignment and structure
>3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} Back     alignment and structure
>3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} Back     alignment and structure
>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.77A {Lyngbya majuscula} Back     alignment and structure
>3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} Back     alignment and structure
>3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 Back     alignment and structure
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 700
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 2e-20
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 1e-11
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 0.001
d1nm2a262 d.58.23.1 (A:134-195) Probable ACP-binding domain 2e-05
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Streptomyces coelicolor A3(2) [TaxId: 100226]

 Score = 89.2 bits (220), Expect = 2e-20
 Identities = 44/300 (14%), Positives = 73/300 (24%), Gaps = 76/300 (25%)

Query: 117 FVYAGMGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSF 176
            V  G G+Q PG   + +        +         +GLD+    T  D     D   + 
Sbjct: 5   LVAPGQGAQTPGFLTDWLALPGAADRVAAWSDA---IGLDLAHFGTKADADEIRDTSVAQ 61

Query: 177 VAIVTCHQGCYVNRLLGALKKIGLTEILRAVGIEPDGYLGHSLGENGVAYADGCFDIREA 236
             +V             AL            G  P    GHS+GE               
Sbjct: 62  PLLVAAGILSAA-----ALGTQTSVADATGPGFTPGAVAGHSVGE--------------- 101

Query: 237 CLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDLPPSVDIACHNSDDNTTISGAQEDVE 296
                     + V        +                            T++GA     
Sbjct: 102 ----ITAAVFAGVLDDTAALSL--------------VRRRGLAMAEAAAVTVAGA----- 138

Query: 297 PYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWISSSIPE 356
                                 +H+R + P   K+ E  +     P      ++S+    
Sbjct: 139 ----------------------FHTRHMAPAVDKLAEAAKA--LTPADPKVTYVSNKDGR 174

Query: 357 EEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPENAI--VIEVAPHGLMQALLRRTTKD 414
              +         +  V    + VR+        E  +  +IEV P G +  L +R    
Sbjct: 175 AVAS----GTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPGGTLTGLAKRALPG 230
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 62 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query700
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 100.0
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 100.0
d1mlaa270 Probable ACP-binding domain of malonyl-CoA ACP tra 99.14
d1nm2a262 Probable ACP-binding domain of malonyl-CoA ACP tra 98.94
d1ispa_179 Lipase A {Bacillus subtilis [TaxId: 1423]} 85.47
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.8e-49  Score=398.45  Aligned_cols=215  Identities=20%  Similarity=0.282  Sum_probs=197.2

Q ss_pred             CEEEEEcCCCCChhhhHHHHhh-cHHHHHHHHHHHhhhcccCCChhhhccCCCCCcchhhhhhhHhhhhhcccccccccc
Q psy8296         114 PVWFVYAGMGSQWPGMARELMW-FAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAIVTCHQGCYVNRLL  192 (700)
Q Consensus       114 ~v~fvF~GQGsq~~gmg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~~~~~~~~q~~l~a~q~~~~~~~~~  192 (700)
                      +++|||||||+||+|||++||+ +|.||+.+++|++++   |+++.+.+...+...++++.++||++|++|         
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l---~~~l~~~~~~~~~~~~~~t~~~qpai~~~~---------   68 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAAL---GYDLWALTQQGPAEELNKTWQTQPALLTAS---------   68 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHTSHHHHHHHHHHHH---------
T ss_pred             CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHh---CCCHHHHHhcCcccccccHHHHHHHHHHHH---------
Confidence            4799999999999999999999 999999999999998   899998887776666788999999999999         


Q ss_pred             chhhHHHHHHHHHHc-CCCcCEEEeCChHHHHHHHHhcCCCHHHHHHHHHHHhHhhhhcccCCCCcEEEEcCCHHhHhCC
Q psy8296         193 GALKKIGLTEILRAV-GIEPDGYLGHSLGENGVAYADGCFDIREACLGGYARGYASKVYKLEKPGLMVSVGLNYKDLTDL  271 (700)
Q Consensus       193 ~~~~~~Ala~ll~~~-Gi~P~~v~GHS~GE~aAa~~aG~lsl~dai~lv~~Rg~l~~~~~~~~~G~M~av~~~~~~v~~l  271 (700)
                           +|++++|+++ |++|++|+|||+|||+|+|+||+++++|+++++..||.+|+... +                  
T Consensus        69 -----~al~~~l~~~~g~~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~-~------------------  124 (235)
T d1mlaa1          69 -----VALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAV-P------------------  124 (235)
T ss_dssp             -----HHHHHHHHHTTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHS-C------------------
T ss_pred             -----HHHHHHHHHhcCCCceeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcC-C------------------
Confidence                 9999999997 99999999999999999999999999999999999999998642 1                  


Q ss_pred             CCCceEeEecCCCcEEEecChhhHHHHHHHHhcCCeeEEEeccccCCCChhhHhhhHHHHHHHHhhhccCCCCCCceEEe
Q psy8296         272 PPSVDIACHNSDDNTTISGAQEDVEPYLEILKAKNIFYRVVNSSFIAYHSRQVKPLAPKVLELFQQAVQNPKKRSAKWIS  351 (700)
Q Consensus       272 ~~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~~i~~~~L~v~~~afHS~~m~~~~~~~~~~l~~~~~~~~~p~~~~~S  351 (700)
                                                                  ..||||++|+++.++|++.++++.+  +.|.+|++|
T Consensus       125 --------------------------------------------~~pfHs~~m~~~~~~~~~~l~~v~~--~~p~~pviS  158 (235)
T d1mlaa1         125 --------------------------------------------EVPSHCALMKPAADKLAVELAKITF--NAPTVPVVN  158 (235)
T ss_dssp             --------------------------------------------TSCTTSGGGHHHHHHHHHHHHTSCC--CCCSSCBBC
T ss_pred             --------------------------------------------CCcchhHHhhhhHHHHHHHHhcCCC--CCCcceEEe
Confidence                                                        3699999999999999999999986  789999999


Q ss_pred             CCCCCCccCCccccCCChhHHHHhhccccchHHHHhhcccC--cEEEEECCChhhHHHHHhhhcC
Q psy8296         352 SSIPEEEWNSPLAQYSSAEYHVNNFLHTVRFTEACAYIPEN--AIVIEVAPHGLMQALLRRTTKD  414 (700)
Q Consensus       352 ~~~g~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~--~~~iEiGP~~~L~~~~~~~l~~  414 (700)
                      +++|+...+.+    ..++||++|+++||+|.++|+.+.++  ++|||||||++|++++|+++++
T Consensus       159 ~~tg~~~~~~~----~~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~i~~~  219 (235)
T d1mlaa1         159 NVDVKCETNGD----AIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDT  219 (235)
T ss_dssp             TTTCCBCCSHH----HHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTT
T ss_pred             CCCCCCCCCHH----HHHHHHHHhccCCccHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCC
Confidence            99999875432    25799999999999999999999877  6799999999999999999864
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure