Psyllid ID: psy8315


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
MIWRILKLRNYLSQIPKRTLKTPRETPDKTLKTPRETPDKTLNTPRETPDKTLKTPRETPDKSLKTPRETPDKTLKTPRETPDKISVKSNSEVSNGVKTPKVSKKPL
cccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cEEEHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccc
MIWRILKLRNYLSqipkrtlktpretpdktlktpretpdktlntpretpdktlktpretpdkslktpretpdktlktpretpdkisvksnsevsngvktpkvskkpl
miwrilklrnylsqipkrtlktpretpdktlktpretpdktlntpretpdktlktpretpdkslktpretpdktlktpretpdkisvksnsevsngvktpkvskkpl
MIWRILKLRNYLSQIPKRTLKTPRETPDKTLKTPRETPDKTLNTPRETPDKTLKTPRETPDKSLKTPRETPDKTLKTPRETPDKISVKSNSEVSNGVKTPKVSKKPL
*IWRILKLRNYLS**********************************************************************************************
*IW********************************************************************************************************
MIWRILKLRNYLSQIPKRTLKTPRE**********************************************************************************
MIWR*LKLRNY************************************************************************************************
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MIWRILKLRNYLSQIPKRTLKTPRETPDKTLKTPRETPDKTLNTPRETPDKTLKTPRETPDKSLKTPRETPDKTLKTPRETPDKISVKSNSEVSNGVKTPKVSKKPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST


Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
MGI|MGI:1921433 840 2310042D19Rik "RIKEN cDNA 2310 0.794 0.101 0.4 1.7e-11
DICTYBASE|DDB_G0291856 1445 gerD "germination protein (270 0.794 0.058 0.417 1.3e-09
UNIPROTKB|H9GW59 963 AEBP1 "Uncharacterized protein 0.654 0.072 0.422 3.5e-09
DICTYBASE|DDB_G0271134 705 celA "cellulase 270-6" [Dictyo 0.831 0.126 0.4 4.8e-09
UNIPROTKB|F1SSF7 1140 AEBP1 "Uncharacterized protein 0.579 0.054 0.460 3.1e-08
UNIPROTKB|F1N1C7 1170 AEBP1 "Uncharacterized protein 0.822 0.075 0.360 1.4e-07
RGD|1306922 1128 Aebp1 "AE binding protein 1" [ 0.682 0.064 0.378 1.7e-07
MGI|MGI:1197012 1128 Aebp1 "AE binding protein 1" [ 0.635 0.060 0.382 4.5e-07
DICTYBASE|DDB_G0291982 557 psiA "PA14 domain-containing p 0.850 0.163 0.363 6.2e-07
DICTYBASE|DDB_G0290521 430 DDB_G0290521 [Dictyostelium di 0.794 0.197 0.371 6.9e-07
MGI|MGI:1921433 2310042D19Rik "RIKEN cDNA 2310042D19 gene" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
 Score = 169 (64.5 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 34/85 (40%), Positives = 37/85 (43%)

Query:    16 PKRTLKTPRETPDKTLKTPRETPDKTLNTPRETPDKTLKTPRETPDKSLKTPRETPDKTL 75
             P     TP   PD  L TP   PD  L+TP   PD  L TP   PD +L TP   PD  L
Sbjct:   338 PNTNQSTPASEPDTALSTPASEPDTALSTPASEPDTALSTPASEPDMALSTPASEPDMAL 397

Query:    76 KTPRETPDKISVKSNSEVSNGVKTP 100
              TP   PD       SE    + TP
Sbjct:   398 STPASEPDMALSTPASEPDTALSTP 422


GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
DICTYBASE|DDB_G0291856 gerD "germination protein (270G)" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|H9GW59 AEBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271134 celA "cellulase 270-6" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1SSF7 AEBP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1N1C7 AEBP1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1306922 Aebp1 "AE binding protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1197012 Aebp1 "AE binding protein 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291982 psiA "PA14 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290521 DDB_G0290521 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00