Psyllid ID: psy8365

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MSDNLSSYSREDGVASHNRPIRWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
cccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcc
ccHHHHccccccHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHccEEEccc
msdnlssysredgvashnrpirwthphhNIQRVLALLLMCLLGfgsyfcydnpssleehfttdmhltnAQYMNLyswyswpnviCCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRrnagetevarlsdvkhfpvSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMvghtmidphITMVMMGIAYSMVASGLWPLIALvipeyqlgtaygm
msdnlssysredgvashnrpirwthPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNrrnagetevarlsdvkhfpvSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
MSDNLSSYSREDGVASHNRPIRWTHPHHNIQRVlalllmcllGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVlsllcslllGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMvvviivSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
*******************PIRWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTA***
****************************NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMD**********************VKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
***************SHNRPIRWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
*********************RWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
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MSDNLSSYSREDGVASHNRPIRWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query381 2.2.26 [Sep-21-2011]
Q32LQ6461 Major facilitator superfa yes N/A 0.950 0.785 0.531 1e-118
Q1JQC1468 Major facilitator superfa yes N/A 0.992 0.807 0.515 1e-116
Q9H3U5465 Major facilitator superfa yes N/A 0.931 0.763 0.536 1e-114
Q9DC37464 Major facilitator superfa yes N/A 0.973 0.799 0.501 1e-111
Q5R8G5465 Major facilitator superfa yes N/A 0.897 0.735 0.533 1e-111
Q5ZIT9442 Major facilitator superfa yes N/A 0.871 0.751 0.466 3e-97
Q0K843430 Probable sulfoacetate tra yes N/A 0.448 0.397 0.266 5e-05
>sp|Q32LQ6|MFSD1_DANRE Major facilitator superfamily domain-containing protein 1 OS=Danio rerio GN=mfsd1 PE=2 SV=1 Back     alignment and function desciption
 Score =  424 bits (1090), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 194/365 (53%), Positives = 271/365 (74%), Gaps = 3/365 (0%)

Query: 17  HNRPIRWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYS 76
           H  PI    P+H + R+L L+ MC LGFGSYFCYDNP++L+     DM+L  A +M LY+
Sbjct: 27  HLNPI--CDPNHLLHRILVLIFMCFLGFGSYFCYDNPAALQSQVIQDMNLNTASFMQLYA 84

Query: 77  WYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136
           WYSWPNV+ CF+GGFL+DRVFGIR+G+ I+S+ V++GQ++FA GA  +  ++  +GRF+F
Sbjct: 85  WYSWPNVVLCFLGGFLLDRVFGIRLGTVIFSLFVLVGQIIFAAGALANHFWLMNVGRFVF 144

Query: 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE-KFGLI 195
           GIGGESLAVAQN+YAV WFKGKELN+VFG QLS++R+GSTVNM V   +Y  ++   G  
Sbjct: 145 GIGGESLAVAQNTYAVNWFKGKELNLVFGLQLSMARLGSTVNMNVIGWVYGRIQMSMGSA 204

Query: 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSF 255
           G  TLGI L++A  TC+ SL+C+L+LG +DKRAERILN+      EV +L+DVK F VS 
Sbjct: 205 GPTTLGITLMIAASTCLFSLICALVLGFLDKRAERILNKEQGKTGEVIKLTDVKDFSVSL 264

Query: 256 WMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK 315
           W++ +I V+YY +IFPF+ L Q  F+++F      A  +NS+VY ISA  SPL+G +VDK
Sbjct: 265 WLIFIICVAYYVAIFPFIGLGQVFFIEKFGFTPVQARAINSVVYIISAPASPLLGFLVDK 324

Query: 316 TGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQL 375
           TGRN+ WV ++++ +++ H M+  T  +P I M ++G++YS++A  LWP++A V+PE+QL
Sbjct: 325 TGRNVMWVMLAVITTLLSHMMLAFTFWNPWIAMSLLGVSYSLLACALWPMVAFVVPEHQL 384

Query: 376 GTAYG 380
           GTAYG
Sbjct: 385 GTAYG 389

Danio rerio (taxid: 7955)
>sp|Q1JQC1|MFSD1_BOVIN Major facilitator superfamily domain-containing protein 1 OS=Bos taurus GN=MFSD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9H3U5|MFSD1_HUMAN Major facilitator superfamily domain-containing protein 1 OS=Homo sapiens GN=MFSD1 PE=2 SV=2 Back     alignment and function description
>sp|Q9DC37|MFSD1_MOUSE Major facilitator superfamily domain-containing protein 1 OS=Mus musculus GN=Mfsd1 PE=1 SV=1 Back     alignment and function description
>sp|Q5R8G5|MFSD1_PONAB Major facilitator superfamily domain-containing protein 1 OS=Pongo abelii GN=MFSD1 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZIT9|MFSD1_CHICK Major facilitator superfamily domain-containing protein 1 OS=Gallus gallus GN=MFSD1 PE=2 SV=1 Back     alignment and function description
>sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
193681165473 PREDICTED: major facilitator superfamily 0.979 0.788 0.603 1e-131
158288293 553 AGAP009523-PA [Anopheles gambiae str. PE 0.937 0.645 0.603 1e-128
170032359 486 major facilitator superfamily domain-con 0.937 0.734 0.589 1e-126
157111941 543 hypothetical protein AaeL_AAEL006002 [Ae 0.937 0.657 0.586 1e-125
157111939 488 hypothetical protein AaeL_AAEL006002 [Ae 0.937 0.731 0.586 1e-125
195471351 485 GE18310 [Drosophila yakuba] gi|194174069 0.973 0.764 0.561 1e-124
195051776 484 GH13224 [Drosophila grimshawi] gi|193900 0.979 0.770 0.565 1e-124
307214824 512 Major facilitator superfamily domain-con 0.986 0.734 0.557 1e-124
281364404 496 CG12194, isoform B [Drosophila melanogas 0.973 0.747 0.559 1e-123
92109876464 IP12824p [Drosophila melanogaster] 0.973 0.799 0.559 1e-123
>gi|193681165|ref|XP_001944923.1| PREDICTED: major facilitator superfamily domain-containing protein 1-like isoform 1 [Acyrthosiphon pisum] gi|328700549|ref|XP_003241299.1| PREDICTED: major facilitator superfamily domain-containing protein 1-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/376 (60%), Positives = 301/376 (80%), Gaps = 3/376 (0%)

Query: 9   SREDGVASHNR--PIRWTHPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHL 66
           S  D   +H     + WTHP H  QR++AL LMCL+GFGSYFC+DNP +L+++F  DM+L
Sbjct: 8   SSSDITDNHEEDCKVTWTHPSHIFQRLIALFLMCLIGFGSYFCFDNPGALQDNFIQDMNL 67

Query: 67  TNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSL 126
           T +Q++ LYSWYSWPNVI CFIGGFLID VFGIR+G+ IY++LVV+GQ+VFA GAY+++L
Sbjct: 68  TTSQFVYLYSWYSWPNVIMCFIGGFLIDSVFGIRLGTVIYALLVVLGQIVFAAGAYLNAL 127

Query: 127 FITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY 186
           +I ILGR IFGIGGESLAVAQN+YAVLWFKGKELNMVFGFQ+S +RVGSTVN  V EPLY
Sbjct: 128 WIMILGRLIFGIGGESLAVAQNNYAVLWFKGKELNMVFGFQISFARVGSTVNFIVMEPLY 187

Query: 187 KYVE-KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARL 245
           +Y++ +  +  YQ+L I LL+A +TCVLSL+ +LLL   DKRAE++L+R+    TEV ++
Sbjct: 188 RYIKNQINVPNYQSLSIALLVASLTCVLSLVSALLLAWQDKRAEKLLHRKTPDATEVVKM 247

Query: 246 SDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFL 305
           SDV++FP  FW+V  IIV YYTSIFPFV+L +  F K++N   D+AN +N I+Y IS+  
Sbjct: 248 SDVRYFPKVFWLVTFIIVFYYTSIFPFVALGKVFFEKKYNYSPDSANLINGIIYIISSIC 307

Query: 306 SPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPL 365
           +P +GLV+DKTGRNLFWVF+S++ ++V H  +  T ++P+I M+ MG++YSM+AS LWPL
Sbjct: 308 APGLGLVIDKTGRNLFWVFLSILGTLVSHMFLAFTFVNPYIAMLTMGLSYSMLASALWPL 367

Query: 366 IALVIPEYQLGTAYGM 381
           IA+VIPE+Q+GTAYG+
Sbjct: 368 IAMVIPEHQMGTAYGI 383

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|158288293|ref|XP_310169.4| AGAP009523-PA [Anopheles gambiae str. PEST] gi|157019180|gb|EAA05922.5| AGAP009523-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|170032359|ref|XP_001844049.1| major facilitator superfamily domain-containing protein 1 [Culex quinquefasciatus] gi|167872335|gb|EDS35718.1| major facilitator superfamily domain-containing protein 1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157111941|ref|XP_001651759.1| hypothetical protein AaeL_AAEL006002 [Aedes aegypti] gi|108878230|gb|EAT42455.1| AAEL006002-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|157111939|ref|XP_001651758.1| hypothetical protein AaeL_AAEL006002 [Aedes aegypti] gi|108878229|gb|EAT42454.1| AAEL006002-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|195471351|ref|XP_002087968.1| GE18310 [Drosophila yakuba] gi|194174069|gb|EDW87680.1| GE18310 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|195051776|ref|XP_001993168.1| GH13224 [Drosophila grimshawi] gi|193900227|gb|EDV99093.1| GH13224 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|307214824|gb|EFN89704.1| Major facilitator superfamily domain-containing protein 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|281364404|ref|NP_001162873.1| CG12194, isoform B [Drosophila melanogaster] gi|272406893|gb|ACZ94164.1| CG12194, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|92109876|gb|ABE73262.1| IP12824p [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
FB|FBgn0031636496 CG12194 [Drosophila melanogast 0.973 0.747 0.516 1.4e-105
FB|FBgn0035763478 CG8602 [Drosophila melanogaste 0.884 0.705 0.553 5.3e-104
ZFIN|ZDB-GENE-051120-153461 mfsd1 "major facilitator super 0.950 0.785 0.498 1.3e-100
UNIPROTKB|Q1JQC1468 MFSD1 "Major facilitator super 0.931 0.758 0.497 2.8e-98
UNIPROTKB|I3LIQ5441 MFSD1 "Uncharacterized protein 0.931 0.804 0.494 7.4e-98
UNIPROTKB|J3KQL7514 MFSD1 "Major facilitator super 0.887 0.657 0.513 1.2e-97
UNIPROTKB|Q9H3U5465 MFSD1 "Major facilitator super 0.887 0.726 0.513 1.2e-97
UNIPROTKB|E2RHK6465 MFSD1 "Uncharacterized protein 0.887 0.726 0.507 2e-97
UNIPROTKB|F1P182459 MFSD1 "Major facilitator super 0.887 0.736 0.501 4.1e-97
RGD|1305751464 Mfsd1 "major facilitator super 0.931 0.765 0.480 3.7e-96
FB|FBgn0031636 CG12194 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
 Identities = 192/372 (51%), Positives = 259/372 (69%)

Query:     9 SREDGVASHNRPIRWTHPHHNIQRVXXXXXXXXXGFGSYFCYDNPSSLEEHFTTDMHLTN 68
             +R+  +A H +      P     R          GFGSYFCYDNP +L++ F  ++ L++
Sbjct:    34 TRDTELAGHQKDAGCCDPTSTPHRFLALLFMCLLGFGSYFCYDNPGALQDVFQKELQLSS 93

Query:    69 AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFI 128
              ++  +YS YSWPN++ CF+GGFLIDRVFGIR+G+ IY ++V++GQL+FA G  +   ++
Sbjct:    94 TEFTLIYSIYSWPNIVLCFVGGFLIDRVFGIRLGTIIYMLIVLVGQLIFATGGVLGHFWL 153

Query:   129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188
              I+GRF+FGIG ESLAVAQNSYAVLWFKGKE+NMVFG QLS++R GSTVN ++ +PLY Y
Sbjct:   154 MIVGRFVFGIGAESLAVAQNSYAVLWFKGKEINMVFGLQLSVARFGSTVNFWIMQPLYGY 213

Query:   189 VEKFGLIGYQTLGIVLLLAGMTCVXXXXXXXXXGCMDKRAERILNRRNAGETEVARLSDV 248
             V K    GY+ LG+ L LA  TCV         G MDKRAERIL R N    E+A+LSD+
Sbjct:   214 VSK-SYSGYKGLGVALFLASSTCVMSLVCTLILGWMDKRAERILKRNNNPGGELAKLSDI 272

Query:   249 KHFPVSFWMXXXXXXSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPL 308
               F + FWM      +YY +IFPFV+L Q  FV  F++  D AN +NSIVY ISA  SPL
Sbjct:   273 VTFKLDFWMVSVVCVAYYVAIFPFVALGQAFFVSNFHMTPDEANTVNSIVYLISAIASPL 332

Query:   309 MGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIAL 368
              G V+DK GRN+ WVF + + +++ HF++  T +DP+I M +MG++YSM+A+ LWPL++L
Sbjct:   333 FGFVIDKVGRNVTWVFCATISTLLAHFLLTFTHLDPYIGMSIMGLSYSMLAASLWPLVSL 392

Query:   369 VIPEYQLGTAYG 380
             ++PEYQLGTAYG
Sbjct:   393 IVPEYQLGTAYG 404
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
FB|FBgn0035763 CG8602 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-051120-153 mfsd1 "major facilitator superfamily domain containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q1JQC1 MFSD1 "Major facilitator superfamily domain-containing protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LIQ5 MFSD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|J3KQL7 MFSD1 "Major facilitator superfamily domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H3U5 MFSD1 "Major facilitator superfamily domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RHK6 MFSD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1P182 MFSD1 "Major facilitator superfamily domain-containing protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1305751 Mfsd1 "major facilitator superfamily domain containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9H3U5MFSD1_HUMANNo assigned EC number0.53650.93170.7634yesN/A
Q1JQC1MFSD1_BOVINNo assigned EC number0.51570.99210.8076yesN/A
Q5ZIT9MFSD1_CHICKNo assigned EC number0.46620.87130.7511yesN/A
Q32LQ6MFSD1_DANRENo assigned EC number0.53150.95010.7852yesN/A
Q9DC37MFSD1_MOUSENo assigned EC number0.50130.97370.7995yesN/A
Q5R8G5MFSD1_PONABNo assigned EC number0.53350.89760.7354yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 1e-16
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 9e-16
TIGR00886366 TIGR00886, 2A0108, nitrite extrusion protein (nitr 0.001
COG2223417 COG2223, NarK, Nitrate/nitrite transporter [Inorga 0.001
TIGR00893399 TIGR00893, 2A0114, D-galactonate transporter 0.002
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information 
 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 61/348 (17%), Positives = 121/348 (34%), Gaps = 45/348 (12%)

Query: 36  LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDR 95
           LLL+ L  F S       S        D+ L+ +Q   + S +S    +   + G+L DR
Sbjct: 1   LLLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR 60

Query: 96  VFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWF 155
               R+      + +++  L   L A+  SL++ ++GRF+ G+GG +L  A  +    WF
Sbjct: 61  FGRRRV----LLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWF 116

Query: 156 KGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSL 215
             KE     G   +   +G+ +   +            L        + L+  +  +L  
Sbjct: 117 PPKERGRALGLFSAGFGLGALLGPLLG---------GLLAESLGWRWLFLILAILGLLLA 167

Query: 216 LCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSL 275
           L  L                                     ++ +         +  ++ 
Sbjct: 168 LLLLF------------------------------LLRLLLLLALAFFLLSFGYYGLLTY 197

Query: 276 AQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHF 335
                 +   L +  A  L S+        + L GL+ D+ GR    + I L+++ +   
Sbjct: 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257

Query: 336 MVGHT--MIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381
           ++     +    + ++++G         L  L + + P    GTA G+
Sbjct: 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGL 305

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|233170 TIGR00886, 2A0108, nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>gnl|CDD|225133 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 381
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 100.0
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 100.0
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 100.0
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 100.0
PRK14995 495 methyl viologen resistance protein SmvA; Provision 100.0
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 100.0
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 100.0
PRK03545390 putative arabinose transporter; Provisional 100.0
KOG4686|consensus459 100.0
PRK10133438 L-fucose transporter; Provisional 100.0
TIGR00891405 2A0112 putative sialic acid transporter. 100.0
PRK09705393 cynX putative cyanate transporter; Provisional 100.0
PRK11663434 regulatory protein UhpC; Provisional 100.0
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 100.0
PLN00028476 nitrate transmembrane transporter; Provisional 100.0
PRK15075434 citrate-proton symporter; Provisional 100.0
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 100.0
PRK10642 490 proline/glycine betaine transporter; Provisional 100.0
TIGR00900365 2A0121 H+ Antiporter protein. 100.0
PRK03699394 putative transporter; Provisional 100.0
PRK12307426 putative sialic acid transporter; Provisional 100.0
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 100.0
PRK10213394 nepI ribonucleoside transporter; Reviewed 100.0
TIGR00893399 2A0114 d-galactonate transporter. 100.0
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 100.0
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 100.0
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 100.0
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 100.0
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 100.0
PRK09952438 shikimate transporter; Provisional 100.0
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 100.0
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 100.0
PRK10504471 putative transporter; Provisional 100.0
PRK15402406 multidrug efflux system translocase MdfA; Provisio 100.0
TIGR00895398 2A0115 benzoate transport. 100.0
TIGR00881379 2A0104 phosphoglycerate transporter family protein 100.0
TIGR00892455 2A0113 monocarboxylate transporter 1. 100.0
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.98
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.98
PRK03893496 putative sialic acid transporter; Provisional 99.98
PRK10091382 MFS transport protein AraJ; Provisional 99.97
KOG1330|consensus 493 99.97
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.97
TIGR00897402 2A0118 polyol permease family. This family of prot 99.97
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.97
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.97
PRK05122399 major facilitator superfamily transporter; Provisi 99.97
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.97
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.97
PRK03633381 putative MFS family transporter protein; Provision 99.97
TIGR00896355 CynX cyanate transporter. This family of proteins 99.97
PRK11652394 emrD multidrug resistance protein D; Provisional 99.97
PRK11043401 putative transporter; Provisional 99.97
PRK12382392 putative transporter; Provisional 99.97
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.97
PRK10489417 enterobactin exporter EntS; Provisional 99.97
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.97
PRK11195393 lysophospholipid transporter LplT; Provisional 99.97
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.97
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.97
TIGR00901356 2A0125 AmpG-related permease. 99.97
PRK09874408 drug efflux system protein MdtG; Provisional 99.96
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.96
PRK11646400 multidrug resistance protein MdtH; Provisional 99.96
KOG2533|consensus495 99.96
KOG2532|consensus466 99.96
PRK11010 491 ampG muropeptide transporter; Validated 99.96
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.96
PRK10054395 putative transporter; Provisional 99.96
PRK15011393 sugar efflux transporter B; Provisional 99.96
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.96
TIGR00898505 2A0119 cation transport protein. 99.96
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.95
TIGR00805 633 oat sodium-independent organic anion transporter. 99.95
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.95
KOG0569|consensus485 99.95
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 99.95
PRK11902402 ampG muropeptide transporter; Reviewed 99.95
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.95
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.94
PRK09528420 lacY galactoside permease; Reviewed 99.94
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.94
KOG2504|consensus509 99.93
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.93
KOG0254|consensus513 99.93
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.93
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.93
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.93
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.92
PTZ00207591 hypothetical protein; Provisional 99.92
KOG2615|consensus451 99.92
KOG2563|consensus480 99.91
KOG3764|consensus464 99.91
KOG0253|consensus528 99.91
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.91
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.9
KOG0252|consensus538 99.89
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.87
PF13347428 MFS_2: MFS/sugar transport protein 99.87
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.86
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.85
KOG0255|consensus 521 99.85
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.84
PRK09669444 putative symporter YagG; Provisional 99.84
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.84
PRK10429 473 melibiose:sodium symporter; Provisional 99.83
PRK09848448 glucuronide transporter; Provisional 99.81
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.81
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.8
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.79
PRK11462 460 putative transporter; Provisional 99.78
COG2211467 MelB Na+/melibiose symporter and related transport 99.78
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.78
KOG2325|consensus 488 99.74
COG2270438 Permeases of the major facilitator superfamily [Ge 99.72
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.72
KOG3626|consensus 735 99.7
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.67
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 99.62
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.59
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.56
KOG2816|consensus463 99.55
PRK09528420 lacY galactoside permease; Reviewed 99.55
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.54
PRK15011393 sugar efflux transporter B; Provisional 99.54
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.52
PRK10489417 enterobactin exporter EntS; Provisional 99.51
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.51
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.51
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.5
PRK05122399 major facilitator superfamily transporter; Provisi 99.5
PRK10642490 proline/glycine betaine transporter; Provisional 99.49
PRK03699394 putative transporter; Provisional 99.49
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.47
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.46
PRK11010491 ampG muropeptide transporter; Validated 99.45
PRK12382392 putative transporter; Provisional 99.45
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.45
PRK03633381 putative MFS family transporter protein; Provision 99.45
PRK09874408 drug efflux system protein MdtG; Provisional 99.45
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.43
PRK03893496 putative sialic acid transporter; Provisional 99.43
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.43
PRK10504471 putative transporter; Provisional 99.42
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.42
TIGR00897402 2A0118 polyol permease family. This family of prot 99.41
PRK09705393 cynX putative cyanate transporter; Provisional 99.41
TIGR00900365 2A0121 H+ Antiporter protein. 99.4
PRK03545390 putative arabinose transporter; Provisional 99.39
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.39
TIGR00891405 2A0112 putative sialic acid transporter. 99.37
PRK11663434 regulatory protein UhpC; Provisional 99.37
PRK15075434 citrate-proton symporter; Provisional 99.36
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.36
TIGR00895398 2A0115 benzoate transport. 99.36
TIGR00893399 2A0114 d-galactonate transporter. 99.36
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 99.36
PRK12307426 putative sialic acid transporter; Provisional 99.35
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.34
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.34
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.34
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 99.34
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.34
PRK09952438 shikimate transporter; Provisional 99.34
KOG4686|consensus459 99.33
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.3
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.29
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.27
PRK11646400 multidrug resistance protein MdtH; Provisional 99.27
KOG0637|consensus498 99.27
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.26
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.26
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.24
PRK10091382 MFS transport protein AraJ; Provisional 99.23
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.23
TIGR00896355 CynX cyanate transporter. This family of proteins 99.22
PRK11902402 ampG muropeptide transporter; Reviewed 99.22
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.22
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.21
PRK10054395 putative transporter; Provisional 99.2
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.2
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.18
PRK10429473 melibiose:sodium symporter; Provisional 99.16
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.16
KOG2504|consensus509 99.15
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.15
PRK09848448 glucuronide transporter; Provisional 99.15
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.14
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.13
PLN00028476 nitrate transmembrane transporter; Provisional 99.12
KOG0569|consensus485 99.12
TIGR00901356 2A0125 AmpG-related permease. 99.11
PRK09669444 putative symporter YagG; Provisional 99.1
PRK11043401 putative transporter; Provisional 99.1
PF13347428 MFS_2: MFS/sugar transport protein 99.1
PRK11195393 lysophospholipid transporter LplT; Provisional 99.09
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.09
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.08
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 99.07
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.06
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.05
COG2270438 Permeases of the major facilitator superfamily [Ge 99.04
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.04
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.03
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 99.01
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.01
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.01
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.98
KOG4332|consensus454 98.97
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 98.97
COG2211467 MelB Na+/melibiose symporter and related transport 98.96
TIGR00898505 2A0119 cation transport protein. 98.95
PRK10133438 L-fucose transporter; Provisional 98.95
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.93
KOG3098|consensus461 98.91
COG0477338 ProP Permeases of the major facilitator superfamil 98.89
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.89
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 98.88
PRK11652394 emrD multidrug resistance protein D; Provisional 98.86
KOG0253|consensus528 98.83
PRK11462460 putative transporter; Provisional 98.83
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.81
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.8
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.79
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.77
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.77
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.74
KOG3574|consensus 510 98.73
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 98.68
KOG3762|consensus618 98.65
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 98.63
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.62
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 98.6
PRK15403413 multidrug efflux system protein MdtM; Provisional 98.56
COG0738422 FucP Fucose permease [Carbohydrate transport and m 98.54
KOG2532|consensus466 98.54
KOG3764|consensus464 98.54
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.47
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.4
KOG3810|consensus433 98.39
PF1283277 MFS_1_like: MFS_1 like family 98.38
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.38
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.37
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 98.37
PTZ00207 591 hypothetical protein; Provisional 98.31
PF1283277 MFS_1_like: MFS_1 like family 98.3
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 98.25
KOG2816|consensus463 98.21
KOG1330|consensus 493 98.2
KOG1479|consensus406 98.13
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 98.12
KOG0252|consensus538 98.04
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.02
KOG3762|consensus 618 97.99
KOG2533|consensus495 97.98
KOG0254|consensus513 97.93
PF06813 250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 97.92
TIGR00805 633 oat sodium-independent organic anion transporter. 97.91
COG3202509 ATP/ADP translocase [Energy production and convers 97.79
KOG2615|consensus451 97.77
KOG3097|consensus390 97.75
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 97.71
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 97.64
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.56
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 97.53
KOG1237|consensus 571 97.47
KOG0255|consensus521 97.42
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.38
PRK03612 521 spermidine synthase; Provisional 97.38
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 97.26
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 97.25
KOG3098|consensus461 97.04
PF13000 544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 97.03
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 96.92
KOG2325|consensus488 96.89
KOG2563|consensus480 96.82
KOG0637|consensus 498 96.81
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 96.22
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 95.99
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 95.6
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 95.51
KOG3626|consensus735 95.36
KOG4830|consensus412 95.2
COG0477 338 ProP Permeases of the major facilitator superfamil 94.68
KOG1479|consensus406 94.03
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 92.5
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 91.86
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 91.24
PF02990 521 EMP70: Endomembrane protein 70; InterPro: IPR00424 89.53
KOG3880|consensus409 89.23
KOG4332|consensus454 89.16
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 86.41
KOG3880|consensus409 85.43
KOG3574|consensus 510 81.16
KOG2601|consensus 503 80.79
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=6.1e-38  Score=267.82  Aligned_cols=340  Identities=17%  Similarity=0.130  Sum_probs=279.0

Q ss_pred             ccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHH
Q psy8365          27 HHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIY  106 (381)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~  106 (381)
                      .-+++|+.++..+++.+...++.+..++..+|.+.+|.++|.+|+|.+.+.+.+.|.++.++.|.++|| .++|+.+..+
T Consensus        22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~g  100 (448)
T COG2271          22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFG  100 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHH
Confidence            345677888999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh--HH
Q psy8365         107 SVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA--EP  184 (381)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~  184 (381)
                      +++.++..+++.+   +++.+.+.+..++.|..+|..+|++...+++|++++|||+..++++++.++|..+.|++.  +.
T Consensus       101 Lilsai~nil~Gf---s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~  177 (448)
T COG2271         101 LILSAIVNILFGF---SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF  177 (448)
T ss_pred             HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence            9999999887776   789999999999999999999999999999999999999999999999999999999888  55


Q ss_pred             HHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH-------HHhhh-----cccCcccccc-----ccc
Q psy8365         185 LYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE-------RILNR-----RNAGETEVAR-----LSD  247 (381)
Q Consensus       185 l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~~~~~~~~-----~~~  247 (381)
                      +..+.      +||.  .|++.+++..+++++......  ++|++       +..++     +++++++..+     .+.
T Consensus       178 ~~~~~------~w~~--~f~~pgiiaiival~~~~~~r--d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~Y  247 (448)
T COG2271         178 FAFHG------GWRA--AFYFPGIIAIIVALILLFLLR--DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKY  247 (448)
T ss_pred             HHhcc------chhH--HHHHHHHHHHHHHHHHHHHhC--CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHH
Confidence            55444      6999  788888877777766554432  22211       11100     1111111112     223


Q ss_pred             ccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh--cchHHHHHH
Q psy8365         248 VKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT--GRNLFWVFI  325 (381)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--g~r~~~~~~  325 (381)
                      +++ ||.+|.+.+..++.+..-+++..|.|.|+.|..|+|...++...+....+++.|.++.|+++||+  |||.+..+.
T Consensus       248 VL~-Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i  326 (448)
T COG2271         248 VLK-NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALI  326 (448)
T ss_pred             HHc-ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHH
Confidence            344 89999999999999999999999999999999999999999999999999999999999999998  577776666


Q ss_pred             HHHHHHHHHHHHhhccch--hHHHHHHHHHHHHhhhcch--hhhhhhcccCCcccccccC
Q psy8365         326 SLMVSIVCHFMVGHTMID--PHITMVMMGIAYSMVASGL--WPLIALVIPEYQLGTAYGM  381 (381)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~--~~~~~~~~p~~~~g~~~g~  381 (381)
                      ..+...+++..+...+..  .....+++.+|+...+|..  -....|..|++..|++.|+
T Consensus       327 ~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf  386 (448)
T COG2271         327 FMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGF  386 (448)
T ss_pred             HHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhch
Confidence            666666666666554433  4555566666766666643  4567899999999999885

>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>KOG0569|consensus Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>KOG0254|consensus Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>KOG0637|consensus Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>KOG0569|consensus Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>KOG4332|consensus Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3574|consensus Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3810|consensus Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>KOG1479|consensus Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>KOG0254|consensus Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>KOG3097|consensus Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG1237|consensus Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>KOG0637|consensus Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>KOG4830|consensus Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG1479|consensus Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter Back     alignment and domain information
>KOG3880|consensus Back     alignment and domain information
>KOG4332|consensus Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>KOG3880|consensus Back     alignment and domain information
>KOG3574|consensus Back     alignment and domain information
>KOG2601|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 6e-08
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 8e-06
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure
 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 49/371 (13%), Positives = 102/371 (27%), Gaps = 31/371 (8%)

Query: 32  RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGF 91
           R    L +       Y    N + L   +  +   +        S  S       FI G 
Sbjct: 26  RWQIFLGIFFGYAAYYLVRKNFA-LAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGS 84

Query: 92  LIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILG-RFIFGIGGESLAVAQNSY 150
           + DR    R+      +L     L      +  S    +    F+ G   + +       
Sbjct: 85  VSDR-SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGW-FQGMGWPPCGR 142

Query: 151 AV-LWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGM 209
            +  W+  KE   +         VG  +   +      +        +     +     +
Sbjct: 143 TMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW-----FNDWHAALYMPAFCAI 197

Query: 210 TCVLSLLCSLLL-------GCMDKRAERILNRRNAGETEVARLSDVKHFPV------SFW 256
             +++L    ++       G       +     +  E     L+  + F          W
Sbjct: 198 --LVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLW 255

Query: 257 MVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK- 315
            + +  V  Y   +  +  +     +  +   D ++    +        + L G + DK 
Sbjct: 256 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV 315

Query: 316 --TGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYS---MVASGLWPLIALVI 370
               R    VF   +V+I       +   +P + M+ M +           +      + 
Sbjct: 316 FRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA 375

Query: 371 PEYQLGTAYGM 381
           P+   GTA G 
Sbjct: 376 PKKAAGTAAGF 386
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Length = 438 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 100.0
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 100.0
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.97
2xut_A 524 Proton/peptide symporter family protein; transport 99.93
2cfq_A417 Lactose permease; transport, transport mechanism, 99.93
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.6
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.4
2cfq_A417 Lactose permease; transport, transport mechanism, 99.39
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.28
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.18
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.11
2xut_A524 Proton/peptide symporter family protein; transport 98.89
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
Probab=100.00  E-value=3.1e-38  Score=289.71  Aligned_cols=340  Identities=13%  Similarity=0.096  Sum_probs=262.5

Q ss_pred             hHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365          31 QRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV  110 (381)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~  110 (381)
                      +++..+..++...+...++....++..|.+.+++|.++.+.|++.+.+.+++.++++++|+++|| +|||++++.+.++.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~  101 (438)
T 3o7q_A           23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLY  101 (438)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHH-SCHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchHHHHHHHHHH
Confidence            34555566666777778888888999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHH-hhh
Q psy8365         111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY-KYV  189 (381)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~  189 (381)
                      +++.+++....++++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+...++|..+++.+++.+. +..
T Consensus       102 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~  181 (438)
T 3o7q_A          102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV  181 (438)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSS
T ss_pred             HHHHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9998877433448999999999999999999999999999999999999999999999999999999999999988 433


Q ss_pred             hcc-------------------ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccc
Q psy8365         190 EKF-------------------GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKH  250 (381)
Q Consensus       190 ~~~-------------------~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (381)
                      +..                   ...+||+  .++..+++..+..++.   +....++.+++.++++++++.+.+++++++
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~--~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  256 (438)
T 3o7q_A          182 PHQSQDVLDKMSPEQLSAYKHSLVLSVQT--PYMIIVAIVLLVALLI---MLTKFPALQSDNHSDAKQGSFSASLSRLAR  256 (438)
T ss_dssp             CCCCHHHHHHSCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH---HHCCCCCCTTTCCCCSSTTSHHHHHHHHTT
T ss_pred             ccccccccccCCcchhhhhhhhhhhhHHH--HHHHHHHHHHHHHHHH---HHHcCCcccccccccccccchhhhHHHHHh
Confidence            210                   0001888  5555544333332221   112222222211122222333345667777


Q ss_pred             cCcchhhHHHHHHHhhhhhhcchhhHHHH-HHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHH
Q psy8365         251 FPVSFWMVVVIIVSYYTSIFPFVSLAQEL-FVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMV  329 (381)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~  329 (381)
                       +|+++...+..++..........+.|.| +++.+|.++.+++...+...++..++.++.|++.||++||+.+.......
T Consensus       257 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~  335 (438)
T 3o7q_A          257 -IRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIA  335 (438)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence             7899998888888888888888999999 88888999999999999999999999999999999999998865554444


Q ss_pred             HHHHHHHHhh-ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccc
Q psy8365         330 SIVCHFMVGH-TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAY  379 (381)
Q Consensus       330 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~  379 (381)
                       .++..+... ..........+.+++.+...+..+++..|.+|++ ++++.
T Consensus       336 -~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~  384 (438)
T 3o7q_A          336 -MALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGS  384 (438)
T ss_dssp             -HHHHHHHHHCCHHHHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHH
T ss_pred             -HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchh
Confidence             344444333 2223344456677777778888899989999876 66554
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 381
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 1e-10
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 2e-05
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 60.1 bits (144), Expect = 1e-10
 Identities = 46/362 (12%), Positives = 96/362 (26%), Gaps = 13/362 (3%)

Query: 32  RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGF 91
           R    L +       Y    N +     +  +   +        S  S       FI G 
Sbjct: 23  RWQIFLGIFFGYAAYYLVRKNFALAM-PYLVEQGFSRGDLGFALSGISIAYGFSKFIMGS 81

Query: 92  LIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYA 151
           + DR            +   +   +  +     S+ +  +  F+ G              
Sbjct: 82  VSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTM 141

Query: 152 VLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTC 211
           V W+  KE   +         VG  +   +      +   +    Y      +L+A    
Sbjct: 142 VHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAF 201

Query: 212 VLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHF------PVSFWMVVVIIVSY 265
            +        G       +     +  E     L+  + F          W + +  V  
Sbjct: 202 AMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFV 261

Query: 266 YTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFI 325
           Y   +  +  +     +  +   D ++    +        + L G + DK  R       
Sbjct: 262 YLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATG 321

Query: 326 SLMVSIVCHFMVGHTMIDPH------ITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAY 379
              +++V    + + M          I M+++G         +      + P+   GTA 
Sbjct: 322 VFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAA 381

Query: 380 GM 381
           G 
Sbjct: 382 GF 383
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 100.0
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.92
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.59
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.47
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.4e-36  Score=275.45  Aligned_cols=343  Identities=13%  Similarity=0.048  Sum_probs=258.0

Q ss_pred             CccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHH
Q psy8365          26 PHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTI  105 (381)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~  105 (381)
                      +..+++||..+..+++.++..++++..++...|.++ |+|+|++|+|++.+.+.+++.++++++|+++|| +|||+++..
T Consensus        17 ~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~   94 (447)
T d1pw4a_          17 PTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPA   94 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHH
Confidence            345667888888888889999999999999889876 589999999999999999999999999999999 999999999


Q ss_pred             HHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHH
Q psy8365         106 YSVLVVIGQLVFALGA-YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEP  184 (381)
Q Consensus       106 ~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  184 (381)
                      +.++.+++.++++... ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~  174 (447)
T d1pw4a_          95 GLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL  174 (447)
T ss_dssp             HHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             HHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhh
Confidence            9999988888766521 235889999999999999999999999999999999999999999999999999999998888


Q ss_pred             HHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhh-hcc---------------cCcccccccccc
Q psy8365         185 LYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILN-RRN---------------AGETEVARLSDV  248 (381)
Q Consensus       185 l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~~  248 (381)
                      +.+..+     +||+  .++..+.+..+..++.....  +++++++..+ .++               +...++...++.
T Consensus       175 ~~~~~~-----~w~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (447)
T d1pw4a_         175 GMAWFN-----DWHA--ALYMPAFCAILVALFAFAMM--RDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYV  245 (447)
T ss_dssp             HHHHTC-----CSTT--CTHHHHHHHHHHHHHHHHHC--CCSSTTTCCCSCTTTCCC-------------CCTHHHHHHT
T ss_pred             Hhhhhh-----cccc--cchhhhhhHHHHHHHHHHhc--ccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHH
Confidence            777654     6898  45555444444443333222  1111111000 000               000011122334


Q ss_pred             cccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHH
Q psy8365         249 KHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLM  328 (381)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~  328 (381)
                      ++ +|.++......++.....+....+.+.|+++..+.+..+.+.......+..+++.++.|++.||++|++........
T Consensus       246 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  324 (447)
T d1pw4a_         246 LP-NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF  324 (447)
T ss_dssp             SS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred             Hc-CchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchh
Confidence            44 68888888888888888888999999999999999999999999999999999999999999999876543332222


Q ss_pred             HH--HHHHHHHhhc-c---chhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365         329 VS--IVCHFMVGHT-M---IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG  380 (381)
Q Consensus       329 ~~--~~~~~~~~~~-~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g  380 (381)
                      ..  ..+....... .   +...+..++.+++.+...+....+..|.+|++.||++.|
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g  382 (447)
T d1pw4a_         325 MTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAG  382 (447)
T ss_dssp             HHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            22  2222222221 1   122334445555555667777889999999999998876
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure