Psyllid ID: psy8444

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMGMPPDSPIIGNLLRI
ccccccccccccEEEcccEEEEccccccccccccccEEEEEEccccEEEEEEEEEEEcccccccccEEEEEcccccccccEEEcccccccccEEEcccEEEEEEEEccccccccEEEEEEEEcccEEEcccccccEEEcccccccccccccccEEEEEEccccEEEEEEEEEEEEccccccccEEEEEEccccccccccEEccccccccccEEEcccEEEEEEEEccEEEEEEcccccccccccEEEc
ccccccccccccEEEccccEEEccccccccccccEEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccEEEcccEEEEEEEEccccccccEEEEEEEEccccEEcccccccccccccccccccccccEEEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEcccccccccccEEEEccccccccEEEcccEEEEEEEEccccccccEEEEEEEccccEEEc
nghdckeggckyeitapngviktpnhpdyypskreciwhftttpghriklvfqefelephqtcaydhvvmydgdspdsltlgrfcgiklpypiitgsnQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSharyghdnygksmdcdwtieaepgknvhltFLTFDiesnkdceyDYVEVYSgldssvsqasygrfcgtTVALKFQSFRDLRIMTSVHMIMLRLemgmppdspiignllri
nghdckeggckyeitapngviktpnHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALkfqsfrdlRIMTSVHMIMLRlemgmppdspiignllri
NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMGMPPDSPIIGNLLRI
********GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMG**************
***DCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHL*AQ**************DNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMGMPPDSPIIGNLLRI
NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMGMPPDSPIIGNLLRI
****CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMGMPPDSPIIGNLLRI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLEMGMPPDSPIIGNLLRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query248 2.2.26 [Sep-21-2011]
O438971013 Tolloid-like protein 1 OS yes N/A 0.822 0.201 0.524 1e-64
Q9Y6L71015 Tolloid-like protein 2 OS no N/A 0.814 0.199 0.548 3e-64
O574601022 Dorsal-ventral patterning yes N/A 0.822 0.199 0.524 9e-64
Q9DER71008 Tolloid-like protein 1 OS no N/A 0.822 0.202 0.529 1e-63
Q623811013 Tolloid-like protein 1 OS yes N/A 0.883 0.216 0.488 4e-63
Q9WVM61012 Tolloid-like protein 2 OS no N/A 0.822 0.201 0.519 8e-63
Q8JI281007 Tolloid-like protein 1 OS N/A N/A 0.822 0.202 0.504 5e-62
O573821019 Tolloid-like protein 2 OS N/A N/A 0.822 0.200 0.5 3e-60
P98063991 Bone morphogenetic protei no N/A 0.822 0.205 0.485 1e-59
P13497986 Bone morphogenetic protei no N/A 0.822 0.206 0.480 2e-58
>sp|O43897|TLL1_HUMAN Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=1 SV=1 Back     alignment and function desciption
 Score =  246 bits (628), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 108/206 (52%), Positives = 148/206 (71%), Gaps = 2/206 (0%)

Query: 1   NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH 60
           N HDCKE  C+ +I +P+G+I +PN PD YPS++EC W  + TPGHRIKL F EFE+E H
Sbjct: 765 NKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWEISATPGHRIKLAFSEFEIEQH 824

Query: 61  QTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 120
           Q CAYDH+ ++DG++  S  LGR CG K+P P++   N++++ F SDASVQRKGF ATH+
Sbjct: 825 QECAYDHLEVFDGETEKSPILGRLCGNKIPDPLVATGNKMFVRFVSDASVQRKGFQATHS 884

Query: 121 TVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDC 180
           T CGG L+A+   R LYSHA++G +NY   +DC+W + +E G  + L+F TF++E   DC
Sbjct: 885 TECGGRLKAESKPRDLYSHAQFGDNNYPGQVDCEWLLVSERGSRLELSFQTFEVEEEADC 944

Query: 181 EYDYVEVYSGLDSSVSQASYGRFCGT 206
            YDYVE++ GLDS+      GRFCG+
Sbjct: 945 GYDYVELFDGLDSTA--VGLGRFCGS 968
Protease which processes procollagen C-propeptides, such as chordin, pro-biglycan and pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -
>sp|Q9Y6L7|TLL2_HUMAN Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1 Back     alignment and function description
>sp|O57460|TLL1_DANRE Dorsal-ventral patterning tolloid-like protein 1 OS=Danio rerio GN=tll1 PE=2 SV=1 Back     alignment and function description
>sp|Q9DER7|TLL1_CHICK Tolloid-like protein 1 OS=Gallus gallus GN=TLL1 PE=2 SV=1 Back     alignment and function description
>sp|Q62381|TLL1_MOUSE Tolloid-like protein 1 OS=Mus musculus GN=Tll1 PE=1 SV=1 Back     alignment and function description
>sp|Q9WVM6|TLL2_MOUSE Tolloid-like protein 2 OS=Mus musculus GN=Tll2 PE=1 SV=1 Back     alignment and function description
>sp|Q8JI28|TLL1_XENLA Tolloid-like protein 1 OS=Xenopus laevis GN=tll1 PE=1 SV=1 Back     alignment and function description
>sp|O57382|TLL2_XENLA Tolloid-like protein 2 OS=Xenopus laevis GN=tll2 PE=2 SV=1 Back     alignment and function description
>sp|P98063|BMP1_MOUSE Bone morphogenetic protein 1 OS=Mus musculus GN=Bmp1 PE=1 SV=2 Back     alignment and function description
>sp|P13497|BMP1_HUMAN Bone morphogenetic protein 1 OS=Homo sapiens GN=BMP1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query248
307169336 1051 Tolloid-like protein 2 [Camponotus flori 0.883 0.208 0.651 3e-85
332021857 1224 Tolloid-like protein 2 [Acromyrmex echin 0.883 0.178 0.647 4e-85
350424355 1086 PREDICTED: tolloid-like protein 2-like [ 0.883 0.201 0.638 6e-83
307193271 1238 Tolloid-like protein 2 [Harpegnathos sal 0.883 0.176 0.625 9e-83
242023390 914 conserved hypothetical protein [Pediculu 0.826 0.224 0.676 1e-82
340722615 1233 PREDICTED: tolloid-like protein 2-like [ 0.883 0.177 0.633 1e-82
383851625 1225 PREDICTED: tolloid-like protein 2-like [ 0.883 0.178 0.624 2e-82
380022873 914 PREDICTED: LOW QUALITY PROTEIN: tolloid- 0.883 0.239 0.642 3e-82
328787501 1232 PREDICTED: tolkin [Apis mellifera] 0.883 0.177 0.631 4e-82
345495274 1135 PREDICTED: tolloid-like protein 2-like [ 0.826 0.180 0.640 1e-80
>gi|307169336|gb|EFN62057.1| Tolloid-like protein 2 [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 144/221 (65%), Positives = 174/221 (78%), Gaps = 2/221 (0%)

Query: 1    NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH 60
            NGHDCKEGGCKYEI AP G I +PN+PDYYP +++C+WHFTT PGHRIKLVF+ FE+E H
Sbjct: 794  NGHDCKEGGCKYEIIAPVGTITSPNYPDYYPGRKDCVWHFTTKPGHRIKLVFKVFEMESH 853

Query: 61   QTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 120
            Q CAYDH+V+YDGDSPDSLTLGRFCG K P+PI+   NQ+YM+FKSDASVQRKGF+ATH+
Sbjct: 854  QECAYDHIVIYDGDSPDSLTLGRFCGTKEPHPILATGNQMYMVFKSDASVQRKGFLATHS 913

Query: 121  TVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDC 180
            T CGGHL A D  +HLYSHA+YG+ NY  + DCDW IEA  GKNVHL+F +F +E   +C
Sbjct: 914  TACGGHLMATDRVKHLYSHAKYGYHNYDHNTDCDWIIEAPLGKNVHLSFHSFQLEYETEC 973

Query: 181  EYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIM 221
             YD+VEV+SGLD  VS   YGRFCG +    F S  +  ++
Sbjct: 974  GYDFVEVFSGLD--VSSPPYGRFCGNSNTTDFISMNEALLV 1012

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332021857|gb|EGI62193.1| Tolloid-like protein 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|350424355|ref|XP_003493768.1| PREDICTED: tolloid-like protein 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307193271|gb|EFN76162.1| Tolloid-like protein 2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|242023390|ref|XP_002432117.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517491|gb|EEB19379.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|340722615|ref|XP_003399699.1| PREDICTED: tolloid-like protein 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383851625|ref|XP_003701332.1| PREDICTED: tolloid-like protein 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|380022873|ref|XP_003695260.1| PREDICTED: LOW QUALITY PROTEIN: tolloid-like protein 2-like [Apis florea] Back     alignment and taxonomy information
>gi|328787501|ref|XP_393866.3| PREDICTED: tolkin [Apis mellifera] Back     alignment and taxonomy information
>gi|345495274|ref|XP_003427473.1| PREDICTED: tolloid-like protein 2-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query248
FB|FBgn00048851464 tok "tolkin" [Drosophila melan 0.903 0.153 0.512 3.1e-67
UNIPROTKB|F1NRI8960 TLL2 "Uncharacterized protein" 0.895 0.231 0.506 6.5e-63
UNIPROTKB|Q9Y6L71015 TLL2 "Tolloid-like protein 2" 0.814 0.199 0.548 6.3e-62
UNIPROTKB|O438971013 TLL1 "Tolloid-like protein 1" 0.822 0.201 0.524 1.3e-61
UNIPROTKB|E9PD251036 TLL1 "Tolloid-like protein 1" 0.822 0.196 0.524 1.5e-61
RGD|1559756957 Tll2 "tolloid-like 2" [Rattus 0.822 0.213 0.524 2.4e-61
ZFIN|ZDB-GENE-041020-11022 tll1 "tolloid-like 1" [Danio r 0.822 0.199 0.524 3.9e-61
UNIPROTKB|Q9DER71008 TLL1 "Tolloid-like protein 1" 0.822 0.202 0.529 7.6e-61
UNIPROTKB|F1P3981009 TLL1 "Tolloid-like protein 1" 0.822 0.202 0.529 7.7e-61
MGI|MGI:13460441012 Tll2 "tolloid-like 2" [Mus mus 0.822 0.201 0.519 3.5e-60
FB|FBgn0004885 tok "tolkin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 687 (246.9 bits), Expect = 3.1e-67, Sum P(2) = 3.1e-67
 Identities = 120/234 (51%), Positives = 164/234 (70%)

Query:     1 NGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH 60
             NGHDCKEG CKYEI+AP G I +PN+PD YP   +C+WHF TTPGHRIKL+F EF++E H
Sbjct:  1149 NGHDCKEGECKYEISAPFGTIFSPNYPDSYPPNADCVWHFITTPGHRIKLIFNEFDVESH 1208

Query:    61 QTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 120
             Q C YD+V +YDG+S  S  LGRFCG K+P+PI + SNQ+YM+ K+D + Q+ GF A+H+
Sbjct:  1209 QECTYDNVAVYDGESESSSVLGRFCGDKIPFPISSTSNQMYMVLKTDKNKQKNGFTASHS 1268

Query:   121 TVCGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDC 180
             T CGG+L+A    +  YSHAR+G+ +Y   MDC+WTI A     V L FLTFDIES+++C
Sbjct:  1269 TACGGYLRATSQVQQFYSHARFGNQDYDDGMDCEWTIAAPDNSYVQLIFLTFDIESSENC 1328

Query:   181 EYDYVEVYSGLDSSVSQAS--YGRFCGTTVALKFQSFRDLRIMTSVHMIMLRLE 232
              +DYV+V+S +D    Q    YG++CG  +       +D+  MT  H +++R +
Sbjct:  1329 TFDYVQVFSDIDDVYGQYGPMYGQYCGNVLP------QDINSMT--HSLLVRFK 1374
GO:0004222 "metalloendopeptidase activity" evidence=ISS
GO:0005509 "calcium ion binding" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP
GO:0008045 "motor neuron axon guidance" evidence=IMP
GO:0007415 "defasciculation of motor neuron axon" evidence=IMP
GO:0010629 "negative regulation of gene expression" evidence=IDA
GO:0016485 "protein processing" evidence=IDA
GO:0007411 "axon guidance" evidence=IMP
UNIPROTKB|F1NRI8 TLL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y6L7 TLL2 "Tolloid-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O43897 TLL1 "Tolloid-like protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PD25 TLL1 "Tolloid-like protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1559756 Tll2 "tolloid-like 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041020-1 tll1 "tolloid-like 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q9DER7 TLL1 "Tolloid-like protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P398 TLL1 "Tolloid-like protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1346044 Tll2 "tolloid-like 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O57460TLL1_DANRE3, ., 4, ., 2, 4, ., -0.52420.82250.1996yesN/A
O43897TLL1_HUMAN3, ., 4, ., 2, 4, ., -0.52420.82250.2013yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
pfam00431110 pfam00431, CUB, CUB domain 5e-43
cd00041113 cd00041, CUB, CUB domain; extracellular domain; pr 3e-40
smart00042102 smart00042, CUB, Domain first found in C1r, C1s, u 2e-36
pfam00431110 pfam00431, CUB, CUB domain 1e-21
cd00041113 cd00041, CUB, CUB domain; extracellular domain; pr 6e-21
smart00042102 smart00042, CUB, Domain first found in C1r, C1s, u 2e-18
>gnl|CDD|215916 pfam00431, CUB, CUB domain Back     alignment and domain information 
 Score =  141 bits (357), Expect = 5e-43
 Identities = 48/110 (43%), Positives = 69/110 (62%)

Query: 10  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVV 69
           C   +T  +G I +PN+P+ YP  ++C+W     PG+RI L FQ+F+LE H  C YD+V 
Sbjct: 1   CGGVLTESSGSITSPNYPNSYPPNKDCVWTIRAPPGYRISLTFQDFDLEDHDECGYDYVE 60

Query: 70  MYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATH 119
           + DG    S  LGRFCG   P  I + SNQ+ + F SD+S+ ++GF AT+
Sbjct: 61  IRDGLPSSSPLLGRFCGSGPPEDIRSTSNQMTIKFVSDSSISKRGFKATY 110

Length = 110
>gnl|CDD|238001 cd00041, CUB, CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast Back     alignment and domain information
>gnl|CDD|214483 smart00042, CUB, Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein Back     alignment and domain information
>gnl|CDD|215916 pfam00431, CUB, CUB domain Back     alignment and domain information
>gnl|CDD|238001 cd00041, CUB, CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast Back     alignment and domain information
>gnl|CDD|214483 smart00042, CUB, Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 248
PF00431110 CUB: CUB domain CUB domain entry Spermadhesins fam 99.91
cd00041113 CUB CUB domain; extracellular domain; present in p 99.89
PF00431110 CUB: CUB domain CUB domain entry Spermadhesins fam 99.87
cd00041113 CUB CUB domain; extracellular domain; present in p 99.87
smart00042102 CUB Domain first found in C1r, C1s, uEGF, and bone 99.86
smart00042102 CUB Domain first found in C1r, C1s, uEGF, and bone 99.84
KOG4292|consensus454 99.79
KOG4586|consensus156 99.75
KOG4586|consensus156 99.73
KOG4292|consensus454 99.43
PF05428311 CRF-BP: Corticotropin-releasing factor binding pro 98.55
PF05428 311 CRF-BP: Corticotropin-releasing factor binding pro 96.74
PF02408120 CUB_2: CUB-like domain; InterPro: IPR003366 This d 96.24
PF02408120 CUB_2: CUB-like domain; InterPro: IPR003366 This d 95.94
>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork Back     alignment and domain information 
Probab=99.91  E-value=1.9e-23  Score=150.06  Aligned_cols=110  Identities=45%  Similarity=0.874  Sum_probs=101.2

Q ss_pred             CCcEEecCceEEeCCCCCCCCCCCCcEEEEEEeCCCCeEEEEEEEEEEcCCCCCcceEEEEEeCCCCCccceeccccccC
Q psy8444          10 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKL   89 (248)
Q Consensus        10 C~~~~~~~~G~i~SP~yP~~y~~~~~C~w~I~~~~g~~i~l~f~~f~l~~~~~C~~d~l~i~dg~~~~~~~~~~~cg~~~   89 (248)
                      |++.++..+|.|+||+||..|+.+..|.|.|+++++.+|+|.|..|+++....|..|+|.|+++.......+.++||...
T Consensus         1 Cg~~~~~~~g~i~Sp~yp~~y~~~~~C~w~i~~~~~~~I~l~f~~~~~~~~~~c~~d~l~v~~g~~~~~~~~~~~cg~~~   80 (110)
T PF00431_consen    1 CGGRLTNNSGIISSPNYPSNYPSNSDCTWTITAPPGHRIRLTFLSFDLESSDSCCQDYLEVYDGNDESSPLLGRFCGSSP   80 (110)
T ss_dssp             SEEEECSSEEEEESTTTTS-SSSSEEEEEEEE-STTEEEEEEEEEEEB--TTTSTSSEEEEESSSSTTSEEEEEESSSSC
T ss_pred             CcCEEECCeEEEECCCCCCCCCCCCcEeEEEEecccceeeeccccccceeeeeecccceeEEeeccccceeeeeccCCcC
Confidence            88999999999999999999999999999999999999999999999998888999999999999887788899999888


Q ss_pred             CccEEEcCCEEEEEEEeCCCccCCCeEEEE
Q psy8444          90 PYPIITGSNQLYMMFKSDASVQRKGFIATH  119 (248)
Q Consensus        90 p~~~~s~~~~l~v~f~s~~~~~~~GF~~~y  119 (248)
                      |..+++.++.|+|+|+++......||+++|
T Consensus        81 ~~~i~s~~~~l~i~f~s~~~~~~~gF~~~y  110 (110)
T PF00431_consen   81 PPSIISSSNSLFIRFHSDSSNSSRGFKATY  110 (110)
T ss_dssp             CEEEEESSSEEEEEEEESSSSTTSEEEEEE
T ss_pred             CccEEECCCEEEEEEEECCCCCCccEEEEC
Confidence            889999999999999999999999999987

; InterPro: IPR000859 The CUB domain (for complement C1r/C1s, Uegf, Bmp1) is a structural motif of approximately 110 residues found almost exclusively in extracellular and plasma membrane-associated proteins, many of which are developmentally regulated [, ]. These proteins are involved in a diverse range of functions, including complement activation, developmental patterning, tissue repair, axon guidance and angiogenesis, cell signalling, fertilisation, haemostasis, inflammation, neurotransmission, receptor-mediated endocytosis, and tumour suppression [, ]. Many CUB-containing proteins are peptidases belonging to MEROPS peptidase families M12A (astacin) and S1A (chymotrypsin). Proteins containing a CUB domain include: Mammalian complement subcomponents C1s/C1r, which form the calcium-dependent complex C1, the first component of the classical pathway of the complement system. Cricetidae sp. (Hamster) serine protease Casp, which degrades type I and IV collagen and fibronectin in the presence of calcium. Mammalian complement-activating component of Ra-reactive factor (RARF), a protease that cleaves the C4 component of complement. Vertebrate enteropeptidase (3.4.21.9 from EC), a type II membrane protein of the intestinal brush border, which activates trypsinogen. Vertebrate bone morphogenic protein 1 (BMP-1), a protein which induces cartilage and bone formation and expresses metalloendopeptidase activity. Sea urchin blastula proteins BP10 and SpAN. Caenorhabditis elegans hypothetical proteins F42A10.8 and R151.5. Neuropilin (A5 antigen), a calcium-independent cell adhesion molecule that functions during the formation of certain neuronal circuits. Fibropellins I and III from Strongylocentrotus purpuratus (Purple sea urchin). Mammalian hyaluronate-binding protein TSG-6 (or PS4), a serum and growth factor induced protein. Mammalian spermadhesins. Xenopus laevis embryonic protein UVS.2, which is expressed during dorsoanterior development. Several of the above proteins consist of a catalytic domain together with several CUB domains interspersed by calcium-binding EGF domains. Some CUB domains appear to be involved in oligomerisation and/or recognition of substrates and binding partners. For example, in the complement proteases, the CUB domains mediate dimerisation and binding to collagen-like regions of target proteins (e.g. C1q for C1r/C1s). The structure of CUB domains consists of a beta-sandwich with a jelly-roll fold. Almost all CUB domains contain four conserved cysteines that probably form two disulphide bridges (C1-C2, C3-C4). The CUB1 domains of C1s and Map19 have calcium-binding sites [].; PDB: 1SFP_A 3KQ4_B 2WNO_A 2QQK_A 2QQL_A 2QQO_B 2QQM_A 3POJ_A 3POB_A 3POG_B ....
>cd00041 CUB CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast Back     alignment and domain information
>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork Back     alignment and domain information
>cd00041 CUB CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast Back     alignment and domain information
>smart00042 CUB Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein Back     alignment and domain information
>smart00042 CUB Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein Back     alignment and domain information
>KOG4292|consensus Back     alignment and domain information
>KOG4586|consensus Back     alignment and domain information
>KOG4586|consensus Back     alignment and domain information
>KOG4292|consensus Back     alignment and domain information
>PF05428 CRF-BP: Corticotropin-releasing factor binding protein (CRF-BP); InterPro: IPR008435 This family consists of several eukaryotic corticotropin-releasing factor binding proteins (CRF-BP or CRH-BP) Back     alignment and domain information
>PF05428 CRF-BP: Corticotropin-releasing factor binding protein (CRF-BP); InterPro: IPR008435 This family consists of several eukaryotic corticotropin-releasing factor binding proteins (CRF-BP or CRH-BP) Back     alignment and domain information
>PF02408 CUB_2: CUB-like domain; InterPro: IPR003366 This domain is found in a family of hypothetical Caenorhabditis elegans proteins Back     alignment and domain information
>PF02408 CUB_2: CUB-like domain; InterPro: IPR003366 This domain is found in a family of hypothetical Caenorhabditis elegans proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
3kq4_B457 Structure Of Intrinsic Factor-Cobalamin Bound To It 7e-26
3kq4_B 457 Structure Of Intrinsic Factor-Cobalamin Bound To It 9e-07
2qqk_A 579 Neuropilin-2 A1a2b1b2 Domains In Complex With A Sem 9e-21
2qqm_A 450 Crystal Structure Of The A2b1b2 Domains From Human 1e-14
4gz9_A 577 Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2 1e-14
2wno_A149 X-Ray Structure Of Cub_c Domain From Tsg-6 Length = 2e-14
2wno_A149 X-Ray Structure Of Cub_c Domain From Tsg-6 Length = 7e-06
4aqb_A361 Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44 L 3e-12
3dem_A278 Cub1-egf-cub2 Domain Of Human Masp-1/3 Length = 278 4e-12
2qqo_A 460 Crystal Structure Of The A2b1b2 Domains From Human 5e-12
2qqo_A 460 Crystal Structure Of The A2b1b2 Domains From Human 2e-05
3pob_A115 Crystal Structure Of Masp-1 Cub2 Domain In Complex 3e-10
1nzi_A159 Crystal Structure Of The Cub1-Egf Interaction Domai 9e-09
1nzi_A159 Crystal Structure Of The Cub1-Egf Interaction Domai 8e-04
1nt0_A286 Crystal Structure Of The Cub1-Egf-Cub2 Region Of Ma 1e-07
1nt0_A 286 Crystal Structure Of The Cub1-Egf-Cub2 Region Of Ma 1e-04
1szb_A170 Crystal Structure Of The Human Mbl-Associated Prote 3e-05
1szb_A170 Crystal Structure Of The Human Mbl-Associated Prote 7e-04
>pdb|3KQ4|B Chain B, Structure Of Intrinsic Factor-Cobalamin Bound To Its Receptor Cubilin Length = 457 Back     alignment and structure 
Iteration: 1

 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 4   DCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTC 63
           D    GC   +T  +G   +PN+P  Y    EC W   ++ G   +L F++F LE H  C
Sbjct: 228 DGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNC 287
Query: 64  AYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTVC 123
             D++ +YDG S +S  L + CG + P  I +  + +++  ++D   Q +GF A +   C
Sbjct: 288 TLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTC 347
Query: 124 GGHLQAQDYKRHLYSHARYGHDN-YGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEY 182
              +        L S    G+ N Y ++  C+WTI A  G  V+ TFL FD+E + +C  
Sbjct: 348 ENVVIVNQTYGILES---IGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCST 404
Query: 183 DYVEVYSGLDSSVSQASYGRFCG 205
           DY+E+Y G          GR+CG
Sbjct: 405 DYLELYDG------PRQMGRYCG 421
>pdb|3KQ4|B Chain B, Structure Of Intrinsic Factor-Cobalamin Bound To Its Receptor Cubilin Length = 457 Back     alignment and structure
>pdb|2QQK|A Chain A, Neuropilin-2 A1a2b1b2 Domains In Complex With A Semaphorin-Blocking Fab Length = 579 Back     alignment and structure
>pdb|2QQM|A Chain A, Crystal Structure Of The A2b1b2 Domains From Human Neuropilin-1 Length = 450 Back     alignment and structure
>pdb|4GZ9|A Chain A, Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2b1b2) Length = 577 Back     alignment and structure
>pdb|2WNO|A Chain A, X-Ray Structure Of Cub_c Domain From Tsg-6 Length = 149 Back     alignment and structure
>pdb|2WNO|A Chain A, X-Ray Structure Of Cub_c Domain From Tsg-6 Length = 149 Back     alignment and structure
>pdb|4AQB|A Chain A, Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44 Length = 361 Back     alignment and structure
>pdb|3DEM|A Chain A, Cub1-egf-cub2 Domain Of Human Masp-1/3 Length = 278 Back     alignment and structure
>pdb|2QQO|A Chain A, Crystal Structure Of The A2b1b2 Domains From Human Neuropilin-2 Length = 460 Back     alignment and structure
>pdb|2QQO|A Chain A, Crystal Structure Of The A2b1b2 Domains From Human Neuropilin-2 Length = 460 Back     alignment and structure
>pdb|3POB|A Chain A, Crystal Structure Of Masp-1 Cub2 Domain In Complex With The Collagen- Like Domain Of Mbl Length = 115 Back     alignment and structure
>pdb|1NZI|A Chain A, Crystal Structure Of The Cub1-Egf Interaction Domain Of Complement Protease C1s Length = 159 Back     alignment and structure
>pdb|1NZI|A Chain A, Crystal Structure Of The Cub1-Egf Interaction Domain Of Complement Protease C1s Length = 159 Back     alignment and structure
>pdb|1NT0|A Chain A, Crystal Structure Of The Cub1-Egf-Cub2 Region Of Masp2 Length = 286 Back     alignment and structure
>pdb|1NT0|A Chain A, Crystal Structure Of The Cub1-Egf-Cub2 Region Of Masp2 Length = 286 Back     alignment and structure
>pdb|1SZB|A Chain A, Crystal Structure Of The Human Mbl-Associated Protein 19 (Map19) Length = 170 Back     alignment and structure
>pdb|1SZB|A Chain A, Crystal Structure Of The Human Mbl-Associated Protein 19 (Map19) Length = 170 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
3kq4_B457 Cubilin; protein-protein complex, cobalt, cobalt t 1e-70
3kq4_B 457 Cubilin; protein-protein complex, cobalt, cobalt t 2e-61
3kq4_B 457 Cubilin; protein-protein complex, cobalt, cobalt t 6e-55
3kq4_B457 Cubilin; protein-protein complex, cobalt, cobalt t 8e-31
2qqk_A 579 Neuropilin-2; VEGF receptor, semaphorin receptor, 7e-60
2qqk_A 579 Neuropilin-2; VEGF receptor, semaphorin receptor, 1e-40
2qqm_A 450 Neuropilin-1; VEGF receptor, semaphorin receptor, 2e-50
2qqm_A 450 Neuropilin-1; VEGF receptor, semaphorin receptor, 4e-16
3dem_A278 Complement factor MAsp-3; complement system, innat 3e-50
3dem_A278 Complement factor MAsp-3; complement system, innat 9e-39
3dem_A 278 Complement factor MAsp-3; complement system, innat 4e-17
1nt0_A286 MAsp2, mannose-binding protein associated serine p 3e-48
1nt0_A286 MAsp2, mannose-binding protein associated serine p 2e-40
1nt0_A 286 MAsp2, mannose-binding protein associated serine p 8e-17
4aqb_A361 Mannan-binding lectin serine protease 1; blood clo 8e-48
4aqb_A361 Mannan-binding lectin serine protease 1; blood clo 1e-42
2wno_A149 Tumor necrosis factor-inducible gene 6 protein; gl 1e-46
2wno_A149 Tumor necrosis factor-inducible gene 6 protein; gl 2e-22
2qqo_A 460 Neuropilin-2; VEGF receptor, semaphorin receptor, 6e-46
2qqo_A 460 Neuropilin-2; VEGF receptor, semaphorin receptor, 4e-16
3poj_A115 Mannan-binding lectin serine protease 1; CUB domai 3e-38
3poj_A115 Mannan-binding lectin serine protease 1; CUB domai 3e-17
1nzi_A159 Complement C1S component; calcium, innate immunity 4e-38
1nzi_A159 Complement C1S component; calcium, innate immunity 3e-18
1szb_A170 Mannose binding lectin-associated serine protease- 3e-35
1szb_A170 Mannose binding lectin-associated serine protease- 6e-19
1sfp_A114 ASFP; spermadhesin, bovine seminal plasma protein, 2e-34
1sfp_A114 ASFP; spermadhesin, bovine seminal plasma protein, 5e-19
1spp_A109 Major seminal plasma glycoprotein PSP-I; seminal p 6e-34
1spp_A109 Major seminal plasma glycoprotein PSP-I; seminal p 3e-16
1spp_B116 Major seminal plasma glycoprotein PSP-II; seminal 8e-34
1spp_B116 Major seminal plasma glycoprotein PSP-II; seminal 9e-15
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457 Back     alignment and structure
 Score =  222 bits (568), Expect = 1e-70
 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 8/212 (3%)

Query: 3   HDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQT 62
            D    GC   +T  +G   +PN+P  Y    EC W   ++ G   +L F++F LE H  
Sbjct: 227 WDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPN 286

Query: 63  CAYDHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTV 122
           C  D++ +YDG S +S  L + CG + P  I +  + +++  ++D   Q +GF A +   
Sbjct: 287 CTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQT 346

Query: 123 CGGHLQAQDYKRHLYSHARYGHDNYGKSMDCDWTIEAEPGKNVHLTFLTFDIESNKDCEY 182
           C   +        L S      + Y ++  C+WTI A  G  V+ TFL FD+E + +C  
Sbjct: 347 CENVVIVNQTYGILESIGY--PNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCST 404

Query: 183 DYVEVYSGLDSSVSQASYGRFCGTTVALKFQS 214
           DY+E+Y G          GR+CG  +     +
Sbjct: 405 DYLELYDGPR------QMGRYCGVDLPPPGST 430
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457 Back     alignment and structure
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457 Back     alignment and structure
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457 Back     alignment and structure
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579 Back     alignment and structure
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579 Back     alignment and structure
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Length = 450 Back     alignment and structure
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Length = 450 Back     alignment and structure
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278 Back     alignment and structure
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278 Back     alignment and structure
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278 Back     alignment and structure
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286 Back     alignment and structure
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286 Back     alignment and structure
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286 Back     alignment and structure
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361 Back     alignment and structure
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361 Back     alignment and structure
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Length = 149 Back     alignment and structure
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Length = 460 Back     alignment and structure
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Length = 460 Back     alignment and structure
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Length = 115 Back     alignment and structure
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Length = 115 Back     alignment and structure
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159 Back     alignment and structure
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159 Back     alignment and structure
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170 Back     alignment and structure
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170 Back     alignment and structure
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Length = 114 Back     alignment and structure
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Length = 114 Back     alignment and structure
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 109 Back     alignment and structure
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 109 Back     alignment and structure
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 116 Back     alignment and structure
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 116 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query248
4gz9_A 577 Neuropilin-1, A5 protein; multi-domain, cell-CELL 100.0
3kq4_B457 Cubilin; protein-protein complex, cobalt, cobalt t 100.0
1nt0_A286 MAsp2, mannose-binding protein associated serine p 100.0
3kq4_B 457 Cubilin; protein-protein complex, cobalt, cobalt t 100.0
2qqk_A 579 Neuropilin-2; VEGF receptor, semaphorin receptor, 100.0
3dem_A278 Complement factor MAsp-3; complement system, innat 100.0
4aqb_A361 Mannan-binding lectin serine protease 1; blood clo 100.0
2wno_A149 Tumor necrosis factor-inducible gene 6 protein; gl 99.95
3poj_A115 Mannan-binding lectin serine protease 1; CUB domai 99.93
2wno_A149 Tumor necrosis factor-inducible gene 6 protein; gl 99.93
2qqo_A 460 Neuropilin-2; VEGF receptor, semaphorin receptor, 99.92
2qqm_A 450 Neuropilin-1; VEGF receptor, semaphorin receptor, 99.92
1spp_B116 Major seminal plasma glycoprotein PSP-II; seminal 99.9
1spp_A109 Major seminal plasma glycoprotein PSP-I; seminal p 99.9
3poj_A115 Mannan-binding lectin serine protease 1; CUB domai 99.9
1sfp_A114 ASFP; spermadhesin, bovine seminal plasma protein, 99.9
1szb_A170 Mannose binding lectin-associated serine protease- 99.89
1nzi_A159 Complement C1S component; calcium, innate immunity 99.89
1nt0_A286 MAsp2, mannose-binding protein associated serine p 99.88
3dem_A278 Complement factor MAsp-3; complement system, innat 99.87
1szb_A170 Mannose binding lectin-associated serine protease- 99.87
1nzi_A159 Complement C1S component; calcium, innate immunity 99.87
4gz9_A 577 Neuropilin-1, A5 protein; multi-domain, cell-CELL 99.87
2qqk_A 579 Neuropilin-2; VEGF receptor, semaphorin receptor, 99.86
2qqm_A 450 Neuropilin-1; VEGF receptor, semaphorin receptor, 99.86
2qqo_A 460 Neuropilin-2; VEGF receptor, semaphorin receptor, 99.85
4aqb_A361 Mannan-binding lectin serine protease 1; blood clo 99.85
1spp_B116 Major seminal plasma glycoprotein PSP-II; seminal 99.85
1spp_A109 Major seminal plasma glycoprotein PSP-I; seminal p 99.84
1sfp_A114 ASFP; spermadhesin, bovine seminal plasma protein, 99.84
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H Back     alignment and structure
Probab=100.00  E-value=1.9e-47  Score=346.20  Aligned_cols=217  Identities=25%  Similarity=0.536  Sum_probs=196.1

Q ss_pred             CCCCCCCCCcEEecC-ceEEeCCCCCCCCCCCCcEEEEEEeCCC-CeEEEEEE-EEEEcCCCCCcceEEEEEeCCCCCcc
Q psy8444           3 HDCKEGGCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPG-HRIKLVFQ-EFELEPHQTCAYDHVVMYDGDSPDSL   79 (248)
Q Consensus         3 ~~C~~~~C~~~~~~~-~G~i~SP~yP~~y~~~~~C~w~I~~~~g-~~i~l~f~-~f~l~~~~~C~~d~l~i~dg~~~~~~   79 (248)
                      ..|.  .||+.++.. +|.|+||+||..||++..|.|.|++|.+ ++|+|.|. .|+|+. .+|.+|||.|+||....++
T Consensus         4 ~~~~--~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~-~~C~~Dyl~I~dG~~~~~~   80 (577)
T 4gz9_A            4 FRSD--KCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLED-RDCKYDYVEVIDGENEGGR   80 (577)
T ss_dssp             ---C--CSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCC-GGGTSSEEEEEESSSTTSE
T ss_pred             cccC--CCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecC-CCCCccEEEEEeCCCCCCc
Confidence            3454  799999865 5999999999999999999999999865 78999997 799985 5799999999999988888


Q ss_pred             ceeccccccCCccEEEcCCEEEEEEEeCCCccCCCeEEEEEcc-----cCCeEEecCCcceeeecCCCCCCCCCCCCCce
Q psy8444          80 TLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTTV-----CGGHLQAQDYKRHLYSHARYGHDNYGKSMDCD  154 (248)
Q Consensus        80 ~~~~~cg~~~p~~~~s~~~~l~v~f~s~~~~~~~GF~~~y~~~-----C~~~~~~~~~~~~~~~Sp~y~p~~yp~~~~C~  154 (248)
                      +++++||...|..++|+++.|+|+|+||....++||.+.|++.     |++.+...   .|.|+||+| |..||++.+|.
T Consensus        81 ~lg~~CG~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~~~~C~~~~~~~---~G~i~SPny-P~~Yp~n~~C~  156 (577)
T 4gz9_A           81 LWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAP---TGVIKSPGF-PEKYPNSLECT  156 (577)
T ss_dssp             EEEEECSSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEECCCCCEEEEEECSS---EEEEECTTT-TSCCCSSCEEE
T ss_pred             EEEEecCCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEEeecCcccceeecCC---CccccCCCC-CCCCCCCceEE
Confidence            9999999999999999999999999999999999999999874     77776654   459999999 99999999999


Q ss_pred             EEEEeCCCCeEEEEEeEEEeeCCC------CCCCcEEEEEeCCCCCcCCcceecccCCCCCCcEEecCCEEEEEEeeeeE
Q psy8444         155 WTIEAEPGKNVHLTFLTFDIESNK------DCEYDYVEVYSGLDSSVSQASYGRFCGTTVALKFQSFRDLRIMTSVHMIM  228 (248)
Q Consensus       155 w~I~~p~~~~i~l~f~~f~l~~~~------~C~~d~l~I~dg~~~~~~~~~~~~~cg~~~p~~~~S~~n~~~v~f~s~~~  228 (248)
                      |.|.+|+|++|.|+|.+|+||.+.      .|.+|||+||||.+..  ++++++|||...|..++|++|.|+|+|.||.+
T Consensus       157 W~I~~p~g~~I~L~F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~--~~~lg~~CG~~~P~~i~S~~n~l~i~F~SD~s  234 (577)
T 4gz9_A          157 YIIFAPKMSEIILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEV--GPHIGRYCGQKTPGRIRSSSGVLSMVFYTDSA  234 (577)
T ss_dssp             EEEECGGGCCEEEEEEEEECCCCCSCSTTCCCCSSEEEEESSSTTT--SCEEEEECSSSCCCCEEECSSEEEEEEECCSS
T ss_pred             EEEEECCCCEEEEEEEEEEeeecCCCCCCCccCccEEEEEcCCCCC--CceeEEEeCCCCCCCcceeCCEEEEEEEECCC
Confidence            999999999999999999999753      4999999999998876  88999999999999999999999999999876
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Back     alignment and structure
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Back     alignment and structure
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Back     alignment and structure
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Back     alignment and structure
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Back     alignment and structure
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Back     alignment and structure
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Back     alignment and structure
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Back     alignment and structure
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Back     alignment and structure
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Back     alignment and structure
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Back     alignment and structure
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Back     alignment and structure
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Back     alignment and structure
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Back     alignment and structure
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Back     alignment and structure
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Back     alignment and structure
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Back     alignment and structure
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Back     alignment and structure
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Back     alignment and structure
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Back     alignment and structure
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Back     alignment and structure
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H Back     alignment and structure
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Back     alignment and structure
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Back     alignment and structure
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Back     alignment and structure
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Back     alignment and structure
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Back     alignment and structure
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Back     alignment and structure
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 248
d2qqma3108 b.23.1.1 (A:156-263) Mannose-binding protein assoc 4e-23
d2qqma3108 b.23.1.1 (A:156-263) Mannose-binding protein assoc 3e-04
d1szba1121 b.23.1.1 (A:3-123) Mannose-binding protein associa 1e-22
d1szba1121 b.23.1.1 (A:3-123) Mannose-binding protein associa 2e-05
d1nzia1117 b.23.1.1 (A:1-117) Complement C1S component {Human 6e-22
d1nzia1117 b.23.1.1 (A:1-117) Complement C1S component {Human 9e-05
d1nt0a2114 b.23.1.1 (A:165-278) Mannose-binding protein assoc 3e-20
d1sfpa_111 b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) 2e-13
d1sppa_109 b.23.1.1 (A:) Major seminal plasma glycoprotein PS 3e-12
d1sppb_112 b.23.1.1 (B:) Major seminal plasma glycoprotein PS 1e-10
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108 Back     information, alignment and structure

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (217), Expect = 4e-23
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%)

Query: 19  GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYD 72
           GVIK+P  P+ YP+  EC +         I L F+ F+LEP         C YD + ++D
Sbjct: 1   GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60

Query: 73  GDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 120
           G       +GR+CG K P  I + S  L M+F +D+++ ++GF A ++
Sbjct: 61  GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYS 108
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108 Back     information, alignment and structure
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 117 Back     information, alignment and structure
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 117 Back     information, alignment and structure
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114 Back     information, alignment and structure
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]} Length = 111 Back     information, alignment and structure
>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]} Length = 109 Back     information, alignment and structure
>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]} Length = 112 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query248
d2qqma3108 Mannose-binding protein associated serine protease 99.93
d1nt0a2114 Mannose-binding protein associated serine protease 99.91
d2qqma3108 Mannose-binding protein associated serine protease 99.91
d1nzia1117 Complement C1S component {Human (Homo sapiens) [Ta 99.9
d1szba1121 Mannose-binding protein associated serine protease 99.9
d1nt0a2114 Mannose-binding protein associated serine protease 99.88
d1nzia1117 Complement C1S component {Human (Homo sapiens) [Ta 99.88
d1sppa_109 Major seminal plasma glycoprotein PSP-I {Pig (Sus 99.88
d1szba1121 Mannose-binding protein associated serine protease 99.87
d1sppb_112 Major seminal plasma glycoprotein PSP-II {Pig (Sus 99.87
d1sfpa_111 Acidic seminal fluid protein (ASFP) {Cow (Bos taur 99.84
d1sppb_112 Major seminal plasma glycoprotein PSP-II {Pig (Sus 99.81
d1sppa_109 Major seminal plasma glycoprotein PSP-I {Pig (Sus 99.79
d1sfpa_111 Acidic seminal fluid protein (ASFP) {Cow (Bos taur 99.77
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.7e-25  Score=156.76  Aligned_cols=102  Identities=36%  Similarity=0.697  Sum_probs=95.3

Q ss_pred             eEEeCCCCCCCCCCCCcEEEEEEeCCCCeEEEEEEEEEEcCC------CCCcceEEEEEeCCCCCccceeccccccCCcc
Q psy8444          19 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH------QTCAYDHVVMYDGDSPDSLTLGRFCGIKLPYP   92 (248)
Q Consensus        19 G~i~SP~yP~~y~~~~~C~w~I~~~~g~~i~l~f~~f~l~~~------~~C~~d~l~i~dg~~~~~~~~~~~cg~~~p~~   92 (248)
                      |.|+||+||..|+++..|.|.|++|++++|+|.|..|+|+..      ..|.+|+|.|+|+.......++++||...|..
T Consensus         1 G~i~SP~yP~~Y~~~~~C~w~I~~p~~~~I~l~f~~f~l~~~~~~~~~~~C~~D~l~i~dg~~~~~~~~~~~Cg~~~p~~   80 (108)
T d2qqma3           1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGR   80 (108)
T ss_dssp             EEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEEEEECTTCCCCE
T ss_pred             CEEeCCCCCCCCCCCCeEEEEEEeCCCceeeeEEEEEEeecccccccCCCccccEEEEEeccccCCccccEEeeccCCCC
Confidence            889999999999999999999999999999999999999864      34889999999998877788899999999999


Q ss_pred             EEEcCCEEEEEEEeCCCccCCCeEEEEE
Q psy8444          93 IITGSNQLYMMFKSDASVQRKGFIATHT  120 (248)
Q Consensus        93 ~~s~~~~l~v~f~s~~~~~~~GF~~~y~  120 (248)
                      ++|.++.|+|+|+++....++||+|.|+
T Consensus        81 ~~S~~n~l~i~F~Sd~~~~~~GF~~~yt  108 (108)
T d2qqma3          81 IRSSSGILSMVFYTDSAIAKEGFSANYS  108 (108)
T ss_dssp             EEECSSEEEEEEECCSSCCCCEEEEEEE
T ss_pred             EEEcCCEEEEEEEECCCCCCCCEEEEEC
Confidence            9999999999999999889999999985
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure