Psyllid ID: psy8455

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKCATGAHTGQSL
Secondary Structure (PSIPRED)
ccHHHHHHccccccccEEEEccccccccEEEEEEEccEEEEEEEEccccEEEEcccccccHHHHHHHHHHccccEEEccccEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccccEEEEEEcccccccEEEEEccccccEEEEEEccccEEEEcccccccHHHHHHHHHHccccEEEcccEEEEEccEccccccccccccc
Coil and Loop (DISEMBL)
msriaktafpsrqdgdflvresqgspgqyvltgyqggtkkhlllidpegvvrtkdRMFESVSHLVNYhcqnqlpiisaESALilrnpvakcatgahtgqsl
Flexible Loop (DISEMBL)
msriaktafpsrqdgdflvRESQGSPGQYVLTGyqggtkkhlllIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKCATGAHTGQSL
Low Complexity Region (SEG)
MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKCATGAHTGQSL
Disordered region (IsUnstruct)
***************************QYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKCA*********
Disordered Region (DISOPRED)
*SRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVA************
Disordered Region (DISEMBL)
MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKC**********
Disordered Region (DISPRO)
MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAK***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKCATGAHTGQSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
P29353	583	SHC-transforming protein	yes	N/A	0.762	0.132	0.701	2e-25
Q0IIE2	473	SHC-transforming protein	no	N/A	0.762	0.162	0.701	2e-25
Q5R7W7	583	SHC-transforming protein	yes	N/A	0.762	0.132	0.701	3e-25
P98083	579	SHC-transforming protein	yes	N/A	0.762	0.132	0.701	3e-25
Q8BMC3	573	SHC-transforming protein	no	N/A	0.881	0.155	0.622	3e-25
Q5M824	469	SHC-transforming protein	no	N/A	0.762	0.164	0.701	3e-25
O70142	573	SHC-transforming protein	no	N/A	0.881	0.155	0.622	4e-25
Q8AY68	465	SHC-transforming protein	N/A	N/A	0.762	0.165	0.701	4e-25
Q61120	474	SHC-transforming protein	no	N/A	0.881	0.187	0.577	1e-24
Q6S5L8	630	SHC-transforming protein	no	N/A	0.772	0.123	0.653	3e-24

>sp|P29353|SHC1_HUMAN SHC-transforming protein 1 OS=Homo sapiens GN=SHC1 PE=1 SV=4

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 505 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 564

Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 565 PIISAGSELCLQQPVER 581

Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Isoform p46Shc and isoform p52Shc, once phosphorylated, couple activated receptor tyrosine kinases to Ras via the recruitment of the GRB2/SOS complex and are implicated in the cytoplasmic propagation of mitogenic signals. Isoform p46Shc and isoform p52Shc may thus function as initiators of the Ras signaling cascade in various non-neuronal systems. Isoform p66Shc does not mediate Ras activation, but is involved in signal transduction pathways that regulate the cellular response to oxidative stress and life span. Isoform p66Shc acts as a downstream target of the tumor suppressor p53 and is indispensable for the ability of stress-activated p53 to induce elevation of intracellular oxidants, cytochrome c release and apoptosis. The expression of isoform p66Shc has been correlated with life span (By similarity). Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis.
Homo sapiens (taxid: 9606)

>sp|Q0IIE2|SHC1_BOVIN SHC-transforming protein 1 OS=Bos taurus GN=SHC1 PE=2 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 395 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 454

Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 455 PIISAGSELCLQQPVER 471

Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis.

Bos taurus (taxid: 9913)

>sp|Q5R7W7|SHC1_PONAB SHC-transforming protein 1 OS=Pongo abelii GN=SHC1 PE=2 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 60/77 (77%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL+ YH  N L
Sbjct: 505 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLIGYHMDNHL 564

Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 565 PIISAGSELCLQQPVER 581

Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis.

Pongo abelii (taxid: 9601)

>sp|P98083|SHC1_MOUSE SHC-transforming protein 1 OS=Mus musculus GN=Shc1 PE=1 SV=3

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 501 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 560

Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 561 PIISAGSELCLQQPVDR 577

Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis (By similarity). Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Isoform p47Shc and isoform p52Shc, once phosphorylated, couple activated receptor kinases to Ras via the recruitment of the GRB2/SOS complex and are implicated in the cytoplasmic propagation of mitogenic signals. Isoform p47Shc and isoform p52 may thus function as initiators of the Ras signaling cascade in various non-neuronal systems. Isoform p66Shc does not mediate Ras activation, but is involved in signal transduction pathways that regulate the cellular response to oxidative stress and life span. Isoform p66Shc acts as a downstream target of the tumor suppressor p53 and is indispensable for the ability of stress-activated p53 to induce elevation of intracellular oxidants, cytochrome c release and apoptosis. The expression of isoform p66Shc has been correlated with life span.

Mus musculus (taxid: 10090)

>sp|Q8BMC3|SHC2_MOUSE SHC-transforming protein 2 OS=Mus musculus GN=Shc2 PE=1 SV=3

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 1/90 (1%)

Query: 1   MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFES 60
           MSR A      R DGDFLVR+S  +PGQYVLTG   G  KHLLL+DPEGVVRTKD +FES
Sbjct: 483 MSRRAAEKL-LRADGDFLVRDSVTNPGQYVLTGMHAGQPKHLLLVDPEGVVRTKDVLFES 541

Query: 61  VSHLVNYHCQNQLPIISAESALILRNPVAK 90
           +SHL++YH +N LPI++AES L LR  V++
Sbjct: 542 ISHLIDYHLKNGLPIVAAESELHLRGVVSR 571

Signaling adapter that couples activated growth factor receptors to signaling pathway in neurons. Involved in the signal transduction pathways of neurotrophin-activated Trk receptors in cortical neurons.

Mus musculus (taxid: 10090)

>sp|Q5M824|SHC1_RAT SHC-transforming protein 1 OS=Rattus norvegicus GN=Shc1 PE=1 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 391 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 450

Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 451 PIISAGSELCLQQPVDR 467

Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis.

Rattus norvegicus (taxid: 10116)

>sp|O70142|SHC2_RAT SHC-transforming protein 2 OS=Rattus norvegicus GN=Shc2 PE=2 SV=2

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 1/90 (1%)

Query: 1   MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFES 60
           MSR A      R DGDFLVR+S  +PGQYVLTG   G  KHLLL+DPEGVVRTKD +FES
Sbjct: 483 MSRRAAEKL-LRADGDFLVRDSITNPGQYVLTGMHAGQPKHLLLVDPEGVVRTKDVLFES 541

Query: 61  VSHLVNYHCQNQLPIISAESALILRNPVAK 90
           +SHL++YH +N LPI++AES L LR  V++
Sbjct: 542 ISHLIDYHLKNGLPIVAAESELHLRGVVSR 571

Signaling adapter that couples activated growth factor receptors to signaling pathway in neurons. Involved in the signal transduction pathways of neurotrophin-activated Trk receptors in cortical neurons.

Rattus norvegicus (taxid: 10116)

>sp|Q8AY68|SHC1_XENLA SHC-transforming protein 1 OS=Xenopus laevis GN=shc1 PE=1 SV=2

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 387 NGDFLVRESTTTPGQYVLTGLQCGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 446

Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 447 PIISAGSELCLQQPVER 463

Implicated in ras-dependent oocyte maturation induced by insulin/IGF-1.

Xenopus laevis (taxid: 8355)

>sp|Q61120|SHC3_MOUSE SHC-transforming protein 3 OS=Mus musculus GN=Shc3 PE=1 SV=2

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)

Query: 1   MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFES 60
           MSR    A   R+DGDFLVR+S  +PG +VLTG   G  KHLLL+DPEG +RTKDR+F+S
Sbjct: 384 MSRKEAEAL-LREDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIRTKDRVFDS 442

Query: 61  VSHLVNYHCQNQLPIISAESALILRNPVAK 90
           +SHL+NYH ++ LPI+SA S L L+ PV +
Sbjct: 443 ISHLINYHLESSLPIVSAGSELCLQQPVER 472

Signaling adapter that couples activated growth factor receptors to signaling pathway in neurons. Involved in the signal transduction pathways of neurotrophin-activated Trk receptors in cortical neurons.

Mus musculus (taxid: 10090)

>sp|Q6S5L8|SHC4_HUMAN SHC-transforming protein 4 OS=Homo sapiens GN=SHC4 PE=1 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 61/78 (78%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRES  SPGQYVL+G QGG  KHLLL+DPEG VRTKD +F++V HL+ YH  N 
Sbjct: 542 KDGDFLVRESATSPGQYVLSGLQGGQAKHLLLVDPEGKVRTKDHVFDNVGHLIRYHMDNS 601

Query: 73  LPIISAESALILRNPVAK 90
           LPIIS+ S + L+ PV K
Sbjct: 602 LPIISSGSEVSLKQPVRK 619

Activates both Ras-dependent and Ras-independent migratory pathways in melanomas. Contributes to the early phases of agrin-induced tyrosine phosphorylation of CHRNB1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
242015724	419	shc transforming protein, putative [Pedi	0.801	0.193	0.814	3e-33
328722362	395	PREDICTED: SHC-transforming protein 1-li	0.782	0.2	0.835	6e-32
350399507	443	PREDICTED: SHC-transforming protein 1-li	0.811	0.185	0.756	4e-30
340721047	443	PREDICTED: SHC-transforming protein 1-li	0.811	0.185	0.756	4e-30
345492155	473	PREDICTED: SHC-transforming protein 1-li	0.801	0.171	0.765	5e-30
307189948	442	SHC-transforming protein 1 [Camponotus f	0.772	0.176	0.782	5e-30
322798995	410	hypothetical protein SINV_05936 [Solenop	0.772	0.190	0.769	2e-29
383847315	444	PREDICTED: SHC-transforming protein 1-li	0.811	0.184	0.743	2e-29
66520066	443	PREDICTED: SHC-transforming protein 1-li	0.772	0.176	0.769	3e-29
170040326	430	shc transforming protein [Culex quinquef	0.782	0.183	0.734	3e-29

>gi|242015724|ref|XP_002428497.1| shc transforming protein, putative [Pediculus humanus corporis] gi|212513131|gb|EEB15759.1| shc transforming protein, putative [Pediculus humanus corporis]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 76/81 (93%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           ++DG+FLVRESQGSPGQYVLTG QGG KKHLLLIDPEGVVRTKD+MFESV+HL+NYH +N
Sbjct: 338 KKDGEFLVRESQGSPGQYVLTGMQGGLKKHLLLIDPEGVVRTKDKMFESVNHLINYHVEN 397

Query: 72  QLPIISAESALILRNPVAKCA 92
           QLPIISAESAL+LR+PV K +
Sbjct: 398 QLPIISAESALVLRHPVRKAS 418

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722362|ref|XP_003247559.1| PREDICTED: SHC-transforming protein 1-like [Acyrthosiphon pisum]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/79 (83%), Positives = 71/79 (89%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           + DGDFLVRESQGSPGQYVLTG QG  KKHLLLIDPEG VRTKDRMFESVSHLVNYH +N
Sbjct: 314 KHDGDFLVRESQGSPGQYVLTGLQGDVKKHLLLIDPEGAVRTKDRMFESVSHLVNYHSEN 373

Query: 72  QLPIISAESALILRNPVAK 90
           +LPI+SAESALILR PV +
Sbjct: 374 KLPIMSAESALILRYPVPR 392

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399507|ref|XP_003485550.1| PREDICTED: SHC-transforming protein 1-like [Bombus impatiens]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG   GT KHLLLIDPEGVVRTKDR+F+SVSHLVN+HC N 
Sbjct: 362 RDGDFLVRESQGSPGQYVLTGMNNGTPKHLLLIDPEGVVRTKDRVFDSVSHLVNHHCDNV 421

Query: 73  LPIISAESALILRNPVAKCATG 94
           LPIISA+S L+LR P+ + A  
Sbjct: 422 LPIISADSVLVLRYPIPRRANN 443

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721047|ref|XP_003398938.1| PREDICTED: SHC-transforming protein 1-like isoform 1 [Bombus terrestris] gi|340721049|ref|XP_003398939.1| PREDICTED: SHC-transforming protein 1-like isoform 2 [Bombus terrestris]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG   GT KHLLLIDPEGVVRTKDR+F+SVSHLVN+HC N 
Sbjct: 362 RDGDFLVRESQGSPGQYVLTGMNNGTPKHLLLIDPEGVVRTKDRVFDSVSHLVNHHCDNV 421

Query: 73  LPIISAESALILRNPVAKCATG 94
           LPIISA+S L+LR P+ + A  
Sbjct: 422 LPIISADSVLVLRYPIPRRANN 443

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492155|ref|XP_001602298.2| PREDICTED: SHC-transforming protein 1-like [Nasonia vitripennis]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 70/81 (86%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG   G  KHLLLIDPEG+VRTKDR+F+SVSHLVN+HC N 
Sbjct: 392 RDGDFLVRESQGSPGQYVLTGMNNGIPKHLLLIDPEGIVRTKDRVFDSVSHLVNHHCDNT 451

Query: 73  LPIISAESALILRNPVAKCAT 93
           LPIISA+SAL+LR PV +  T
Sbjct: 452 LPIISADSALVLRYPVPRRTT 472

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189948|gb|EFN74184.1| SHC-transforming protein 1 [Camponotus floridanus]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/78 (78%), Positives = 69/78 (88%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG   GT KHLLLIDPEGVVRTKDR+F+SVSHLVN+HC N 
Sbjct: 361 RDGDFLVRESQGSPGQYVLTGMNNGTPKHLLLIDPEGVVRTKDRVFDSVSHLVNHHCDNV 420

Query: 73  LPIISAESALILRNPVAK 90
           LPIISA+S L+LR P+ +
Sbjct: 421 LPIISADSVLVLRYPIPR 438

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798995|gb|EFZ20455.1| hypothetical protein SINV_05936 [Solenopsis invicta]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 68/78 (87%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG    T KHLLLIDPEGVVRTKDR+F+SVSHLVN+HC N 
Sbjct: 329 RDGDFLVRESQGSPGQYVLTGMNNNTPKHLLLIDPEGVVRTKDRVFDSVSHLVNHHCDNV 388

Query: 73  LPIISAESALILRNPVAK 90
           LPIISA+S L+LR P+ +
Sbjct: 389 LPIISADSVLVLRYPIPR 406

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847315|ref|XP_003699300.1| PREDICTED: SHC-transforming protein 1-like [Megachile rotundata]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 69/82 (84%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG    T KHLLLIDPEGVVRTKDR+F+SVSHLVN+HC N 
Sbjct: 363 RDGDFLVRESQGSPGQYVLTGMNNNTPKHLLLIDPEGVVRTKDRVFDSVSHLVNHHCDNV 422

Query: 73  LPIISAESALILRNPVAKCATG 94
           LPIISA+S L+LR P+ +  T 
Sbjct: 423 LPIISADSVLVLRYPIPRRTTN 444

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66520066|ref|XP_395635.2| PREDICTED: SHC-transforming protein 1-like [Apis mellifera]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 68/78 (87%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DGDFLVRESQGSPGQYVLTG    T KHLLLIDPEGVVRTKDR+F+SVSHLVN+HC N 
Sbjct: 362 RDGDFLVRESQGSPGQYVLTGMNNNTPKHLLLIDPEGVVRTKDRVFDSVSHLVNHHCDNV 421

Query: 73  LPIISAESALILRNPVAK 90
           LPIISA+S L+LR P+ +
Sbjct: 422 LPIISADSVLVLRYPIPR 439

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170040326|ref|XP_001847954.1| shc transforming protein [Culex quinquefasciatus] gi|167863881|gb|EDS27264.1| shc transforming protein [Culex quinquefasciatus]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           + DGDFLVRES G+PGQYVLTG Q  + KHLLLIDPEG+VRTKDR+FES+SHL+NYH  N
Sbjct: 320 KNDGDFLVRESAGTPGQYVLTGMQNNSPKHLLLIDPEGIVRTKDRIFESISHLINYHWTN 379

Query: 72  QLPIISAESALILRNPVAK 90
            LPIISAESAL+LR+P+ +
Sbjct: 380 SLPIISAESALLLRHPILR 398

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
FB|FBgn0015296	409	Shc "SHC-adaptor protein" [Dro	0.782	0.193	0.734	1.7e-27
UNIPROTKB|E1BSC1	427	SHC4 "Uncharacterized protein"	0.821	0.194	0.650	1.3e-24
ZFIN|ZDB-GENE-030131-2538	554	si:dkey-246i14.4 "si:dkey-246i	0.792	0.144	0.7	1.4e-24
UNIPROTKB|Q0IIE2	473	SHC1 "SHC-transforming protein	0.762	0.162	0.701	7.4e-24
UNIPROTKB|F1RGP5	474	SHC1 "Uncharacterized protein"	0.762	0.162	0.701	7.5e-24
RGD|620446	469	Shc1 "SHC (Src homology 2 doma	0.742	0.159	0.72	9.1e-24
UNIPROTKB|F1LN14	469	Shc1 "SHC-transforming protein	0.742	0.159	0.72	9.1e-24
UNIPROTKB|F5H5M1	344	SHC4 "SHC-transforming protein	0.772	0.226	0.653	1.4e-23
UNIPROTKB|F1PQC4	576	SHC1 "Uncharacterized protein"	0.762	0.133	0.701	1.5e-23
UNIPROTKB|E1B716	583	SHC1 "SHC-transforming protein	0.762	0.132	0.701	1.6e-23

FB|FBgn0015296 Shc "SHC-adaptor protein" [Drosophila melanogaster (taxid:7227)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 58/79 (73%), Positives = 68/79 (86%)

Query:    12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
             +QDGDFLVRESQG  GQYVLTG +G T KHLLLIDPEGVVRTKDR+F+S+SHL+NYH  +
Sbjct:   316 QQDGDFLVRESQGKRGQYVLTGLEGKTPKHLLLIDPEGVVRTKDRIFDSISHLINYHWAH 375

Query:    72 QLPIISAESALILRNPVAK 90
              LPIIS +S L+LRNPV +
Sbjct:   376 ALPIISEDSELVLRNPVRR 394

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=IGI

GO:0008293 "torso signaling pathway" evidence=IGI

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0035011 "melanotic encapsulation of foreign target" evidence=IMP

UNIPROTKB|E1BSC1 SHC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 282 (104.3 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 54/83 (65%), Positives = 64/83 (77%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             DGDFLVRES  SPGQYVL+G QGG  KHLLL+DPEG VRTKDR+F+SV HL+ YH +N L
Sbjct:   340 DGDFLVRESTTSPGQYVLSGLQGGQAKHLLLVDPEGKVRTKDRIFDSVGHLIQYHMENNL 399

Query:    74 PIISAESALILRNPVAKCATGAH 96
             PIIS+ S + L+ PV K +   H
Sbjct:   400 PIISSGSEVSLKQPVRKESNMGH 422

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0030971 "receptor tyrosine kinase binding" evidence=IEA

ZFIN|ZDB-GENE-030131-2538 si:dkey-246i14.4 "si:dkey-246i14.4" [Danio rerio (taxid:7955)]

 Score = 287 (106.1 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 56/80 (70%), Positives = 65/80 (81%)

Query:    13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
             +DGDFLVRES  +PGQYVLTG QGG  KHLLL+DPEGVVRTKD  FESVSHL++YH  N+
Sbjct:   475 KDGDFLVRESGTTPGQYVLTGQQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNR 534

Query:    73 LPIISAESALILRNPVAKCA 92
             LPIISA S + L+ PV + A
Sbjct:   535 LPIISAGSEVCLQQPVDRKA 554

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|Q0IIE2 SHC1 "SHC-transforming protein 1" [Bos taurus (taxid:9913)]

 Score = 278 (102.9 bits), Expect = 7.4e-24, P = 7.4e-24
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct:   395 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 454

Query:    74 PIISAESALILRNPVAK 90
             PIISA S L L+ PV +
Sbjct:   455 PIISAGSELCLQQPVER 471

GO:0005737 "cytoplasm" evidence=IEA

GO:0040008 "regulation of growth" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1RGP5 SHC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 278 (102.9 bits), Expect = 7.5e-24, P = 7.5e-24
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct:   396 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 455

Query:    74 PIISAESALILRNPVAK 90
             PIISA S L L+ PV +
Sbjct:   456 PIISAGSELCLQQPVER 472

GO:0046875 "ephrin receptor binding" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0030971 "receptor tyrosine kinase binding" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005168 "neurotrophin TRKA receptor binding" evidence=IEA

GO:0005159 "insulin-like growth factor receptor binding" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0000165 "MAPK cascade" evidence=IEA

RGD|620446 Shc1 "SHC (Src homology 2 domain containing) transforming protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 277 (102.6 bits), Expect = 9.1e-24, P = 9.1e-24
 Identities = 54/75 (72%), Positives = 60/75 (80%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct:   391 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 450

Query:    74 PIISAESALILRNPV 88
             PIISA S L L+ PV
Sbjct:   451 PIISAGSELCLQQPV 465

GO:0000165 "MAPK cascade" evidence=ISO

GO:0000187 "activation of MAPK activity" evidence=ISO;IMP

GO:0001525 "angiogenesis" evidence=IEA;ISO

GO:0001666 "response to hypoxia" evidence=IEP

GO:0001784 "phosphotyrosine binding" evidence=IPI

GO:0005154 "epidermal growth factor receptor binding" evidence=IPI

GO:0005158 "insulin receptor binding" evidence=ISO

GO:0005159 "insulin-like growth factor receptor binding" evidence=ISO

GO:0005168 "neurotrophin TRKA receptor binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0007507 "heart development" evidence=ISO

GO:0007568 "aging" evidence=IPI

GO:0008286 "insulin receptor signaling pathway" evidence=IMP;IDA

GO:0009636 "response to toxic substance" evidence=IEP

GO:0010008 "endosome membrane" evidence=IDA

GO:0014070 "response to organic cyclic compound" evidence=IEP

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0030182 "neuron differentiation" evidence=IMP

GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;IPI

GO:0031100 "organ regeneration" evidence=IEP

GO:0031175 "neuron projection development" evidence=IMP

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO

GO:0032403 "protein complex binding" evidence=IPI

GO:0032868 "response to insulin stimulus" evidence=IEP

GO:0035094 "response to nicotine" evidence=IEP

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0040008 "regulation of growth" evidence=IEA

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0045740 "positive regulation of DNA replication" evidence=IMP

GO:0045907 "positive regulation of vasoconstriction" evidence=IMP

GO:0046875 "ephrin receptor binding" evidence=ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IMP

GO:0051219 "phosphoprotein binding" evidence=IPI

GO:0051384 "response to glucocorticoid stimulus" evidence=IEP

GO:0070435 "Shc-EGFR complex" evidence=IDA

UNIPROTKB|F1LN14 Shc1 "SHC-transforming protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 277 (102.6 bits), Expect = 9.1e-24, P = 9.1e-24
 Identities = 54/75 (72%), Positives = 60/75 (80%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct:   391 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 450

Query:    74 PIISAESALILRNPV 88
             PIISA S L L+ PV
Sbjct:   451 PIISAGSELCLQQPV 465

GO:0000165 "MAPK cascade" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IEA

GO:0005159 "insulin-like growth factor receptor binding" evidence=IEA

GO:0005168 "neurotrophin TRKA receptor binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=IEA

GO:0030971 "receptor tyrosine kinase binding" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0046875 "ephrin receptor binding" evidence=IEA

UNIPROTKB|F5H5M1 SHC4 "SHC-transforming protein 4" [Homo sapiens (taxid:9606)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 51/78 (65%), Positives = 61/78 (78%)

Query:    13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
             +DGDFLVRES  SPGQYVL+G QGG  KHLLL+DPEG VRTKD +F++V HL+ YH  N 
Sbjct:   256 KDGDFLVRESATSPGQYVLSGLQGGQAKHLLLVDPEGKVRTKDHVFDNVGHLIRYHMDNS 315

Query:    73 LPIISAESALILRNPVAK 90
             LPIIS+ S + L+ PV K
Sbjct:   316 LPIISSGSEVSLKQPVRK 333

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0030971 "receptor tyrosine kinase binding" evidence=IEA

UNIPROTKB|F1PQC4 SHC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 278 (102.9 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct:   498 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHVDNHL 557

Query:    74 PIISAESALILRNPVAK 90
             PIISA S L L+ PV +
Sbjct:   558 PIISAGSELCLQQPVER 574

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|E1B716 SHC1 "SHC-transforming protein 1" [Bos taurus (taxid:9913)]

 Score = 278 (102.9 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 54/77 (70%), Positives = 61/77 (79%)

Query:    14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
             +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct:   505 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 564

Query:    74 PIISAESALILRNPVAK 90
             PIISA S L L+ PV +
Sbjct:   565 PIISAGSELCLQQPVER 581

GO:0046875 "ephrin receptor binding" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0030971 "receptor tyrosine kinase binding" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005168 "neurotrophin TRKA receptor binding" evidence=IEA

GO:0005159 "insulin-like growth factor receptor binding" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0000165 "MAPK cascade" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P29353	SHC1_HUMAN	No assigned EC number	0.7012	0.7623	0.1320	yes	N/A
Q5R7W7	SHC1_PONAB	No assigned EC number	0.7012	0.7623	0.1320	yes	N/A
P98083	SHC1_MOUSE	No assigned EC number	0.7012	0.7623	0.1329	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	101
cd09925	104	cd09925, SH2_SHC, Src homology 2 (SH2) domain foun	7e-45
smart00252	84	smart00252, SH2, Src homology 2 domains	2e-12
pfam00017	77	pfam00017, SH2, SH2 domain	1e-11
cd10361	90	cd10361, SH2_Fps_family, Src homology 2 (SH2) doma	2e-10
cd10337	136	cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in	1e-09
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	4e-09
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	2e-07
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	3e-07
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	6e-07
cd09940	102	cd09940, SH2_Vav_family, Src homology 2 (SH2) doma	5e-06
cd10346	97	cd10346, SH2_SH2B_family, Src homology 2 (SH2) dom	6e-06
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	9e-06
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	9e-06
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	2e-05
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	4e-05
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	6e-05
cd09944	108	cd09944, SH2_Grb7_family, Src homology 2 (SH2) dom	7e-05
cd10409	98	cd10409, SH2_Nck2, Src homology 2 (SH2) domain fou	8e-05
cd10405	103	cd10405, SH2_Vav1, Src homology 2 (SH2) domain fou	8e-05
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	1e-04
cd09929	121	cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) dom	1e-04
cd10408	97	cd10408, SH2_Nck1, Src homology 2 (SH2) domain fou	2e-04
cd10410	97	cd10410, SH2_SH2B1, Src homology 2 (SH2) domain fo	3e-04
cd10411	97	cd10411, SH2_SH2B2, Src homology 2 (SH2) domain fo	3e-04
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	3e-04
cd10353	103	cd10353, SH2_Nterm_RasGAP, N-terminal Src homology	4e-04
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	4e-04
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	5e-04
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	9e-04
cd10412	97	cd10412, SH2_SH2B3, Src homology 2 (SH2) domain fo	0.001
cd10340	99	cd10340, SH2_N-SH2_SHP_like, N-terminal Src homolo	0.001
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	0.004

>gnl|CDD|198179 cd09925, SH2_SHC, Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)

 Score =  140 bits (354), Expect = 7e-45
 Identities = 56/77 (72%), Positives = 62/77 (80%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           + DGDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKDR+FES+SHL+NYH  N
Sbjct: 24  QTDGDFLVRESTTTPGQYVLTGMQNGQPKHLLLVDPEGVVRTKDRVFESISHLINYHVTN 83

Query: 72  QLPIISAESALILRNPV 88
            LPIIS  S L LR PV
Sbjct: 84  GLPIISEGSELHLRRPV 100

SHC is involved in a wide variety of pathways including regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. An adapter protein, SHC has been implicated in Ras activation following the stimulation of a number of different receptors, including growth factors [insulin, epidermal growth factor (EGF), nerve growth factor, and platelet derived growth factor (PDGF)], cytokines [interleukins 2, 3, and 5], erythropoietin, and granulocyte/macrophage colony-stimulating factor, and antigens [T-cell and B-cell receptors]. SHC has been shown to bind to tyrosine-phosphorylated receptors, and receptor stimulation leads to tyrosine phosphorylation of SHC. Upon phosphorylation, SHC interacts with another adapter protein, Grb2, which binds to the Ras GTP/GDP exchange factor mSOS which leads to Ras activation. SHC is composed of an N-terminal domain that interacts with proteins containing phosphorylated tyrosines, a (glycine/proline)-rich collagen-homology domain that contains the phosphorylated binding site, and a C-terminal SH2 domain. SH2 has been shown to interact with the tyrosine-phosphorylated receptors of EGF and PDGF and with the tyrosine-phosphorylated C chain of the T-cell receptor, providing one of the mechanisms of T-cell-mediated Ras activation. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 57.2 bits (139), Expect = 2e-12
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRM-FESVSHLVNYHCQN 71
          DGDFLVR+S+ SPG YVL+    G  KH  +  + +G    +    F S+  LV ++ +N
Sbjct: 22 DGDFLVRDSESSPGDYVLSVRVKGKVKHYRIRRNEDGKFYLEGGRKFPSLVELVEHYQKN 81

Query: 72 QLP 74
           L 
Sbjct: 82 SLG 84

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 54.9 bits (133), Expect = 1e-11
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI--DPEGVVRTKDRMFESVSHLVNYH 68
           DG FLVRES+  PG Y L+    G  KH  +   D  G   +    F S+  LV ++
Sbjct: 20 PDGTFLVRESESKPGDYTLSVRDDGRVKHYRIQSLDNGGYYISGGVTFNSLPELVEHY 77

Length = 77

>gnl|CDD|198224 cd10361, SH2_Fps_family, Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 12 RQDGDFLVRESQ---GSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLVNY 67
          + DGDFLVR+++   G   + VL+    G  +H ++  D  G    + + F+S+S L+NY
Sbjct: 23 KNDGDFLVRKTEPKGGGKRKLVLSVRWDGKIRHFVINRDDGGKYYIEGKSFKSISELINY 82

Query: 68 HCQNQLPI 75
          + + + PI
Sbjct: 83 YQKTKEPI 90

The Fps family consists of members Fps/Fes and Fer/Flk/Tyk3. They are cytoplasmic protein-tyrosine kinases implicated in signaling downstream from cytokines, growth factors and immune receptors. Fes/Fps/Fer contains three coiled-coil regions, an SH2 (Src-homology-2) and a TK (tyrosine kinase catalytic) domain signature. Members here include: Fps/Fes, Fer, Kin-31, and In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 90

>gnl|CDD|198200 cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in the Breast Cancer Anti-estrogen Resistance protein 3

 Score = 51.2 bits (123), Expect = 1e-09
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-----DPEGVVRT----KDRMFESVS 62
           +++GDFLVR+S  SPG YVLT    G   H  +        E   R     +D  F+S+ 
Sbjct: 23  QREGDFLVRDSLSSPGDYVLTCRWKGQPLHFKINRVVLRPSEAYTRVQYQFEDEQFDSIP 82

Query: 63  HLVNYHCQNQLPIISAESALILRNPV 88
            LV+++  N+ PI  A  A+I R PV
Sbjct: 83  ALVHFYVGNRRPISQASGAIISR-PV 107

BCAR3 is part of a growing family of guanine nucleotide exchange factors is responsible for activation of Ras-family GTPases, including Sos1 and 2, GRF1 and 2, CalDAG-GEF/GRP1-4, C3G, cAMP-GEF/Epac 1 and 2, PDZ-GEFs, MR-GEF, RalGDS family members, RalGPS, RasGEF, Smg GDS, and phospholipase C(epsilon). 12102558 21262352 BCAR3 binds to the carboxy-terminus of BCAR1/p130Cas, a focal adhesion adapter protein. Over expression of BCAR1 (p130Cas) and BCAR3 induces estrogen independent growth in normally estrogen-dependent cell lines. They have been linked to resistance to anti-estrogens in breast cancer, Rac activation, and cell motility, though the BCAR3/p130Cas complex is not required for this activity in BCAR3. Many BCAR3-mediated signaling events in epithelial and mesenchymal cells are independent of p130Cas association. Structurally these proteins contain a single SH2 domain upstream of their RasGEF domain, which is responsible for the ability of BCAR3 to enhance p130Cas over-expression-induced migration. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 136

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 48.6 bits (116), Expect = 4e-09
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 11 SRQDGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG---VVRTKDRMFESVSHLVN 66
           + DG FLVRES   PG YVL+     G  KH L+   EG   ++    R F S+  LV 
Sbjct: 18 GKPDGTFLVRESSSEPGDYVLSVRSGDGKVKHYLIERNEGGYYLLGGSGRTFPSLPELVE 77

Query: 67 YH 68
          ++
Sbjct: 78 HY 79

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 44.9 bits (106), Expect = 2e-07
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 9  FPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVN 66
          +   Q G FL+RES+   G++ L+   GG  KH  +  +D  G   T+ + F +++  VN
Sbjct: 21 YSENQTGAFLIRESESQKGEFSLSVLDGGVVKHYRIRRLDEGGFFLTRRKTFSTLNEFVN 80

Query: 67 YHCQN 71
          Y+   
Sbjct: 81 YYTTT 85

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)

Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEGVVR-TKDRMFESVSHLVNYHCQN 71
          +G FLVRES+ SPGQY ++  Y G    + +  D +G V  T++  F +++ LV++H +N
Sbjct: 24 NGSFLVRESESSPGQYSISLRYDGRVYHYRISEDSDGKVYVTQEHRFNTLAELVHHHSKN 83

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 43.4 bits (103), Expect = 6e-07
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT---KDRMFESVSHLVNYHC 69
          + G FLVRESQ  PG +VL+      K   ++I  +G        +  F+S++ LV ++ 
Sbjct: 21 KPGSFLVRESQSKPGDFVLSVRTDDDKVTHIMIRCQGGKYDVGGGEE-FDSLTDLVEHYK 79

Query: 70 QNQLPIISAESALI-LRNPV 88
          +N  P++     ++ L+ P+
Sbjct: 80 KN--PMVETSGTVVHLKQPL 97

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198193 cd09940, SH2_Vav_family, Src homology 2 (SH2) domain found in the Vav family

 Score = 41.1 bits (97), Expect = 5e-06
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 11 SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVR-TKDRMFESVSHLVNYH 68
          +R DG +LVR       QY L+    G  KH+ +    +G+   ++ R F+S+  LVNY+
Sbjct: 23 NRPDGTYLVRVRPQGETQYALSIKYNGDVKHMKIEQRSDGLYYLSESRHFKSLVELVNYY 82

Query: 69 CQNQL 73
           +N L
Sbjct: 83 ERNSL 87

Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, Vav2 and Vav3 are more ubiquitously expressed. The members here include insect and amphibian Vavs. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|198209 cd10346, SH2_SH2B_family, Src homology 2 (SH2) domain found in SH2B adapter protein family

 Score = 40.9 bits (96), Expect = 6e-06
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
          G FLVR+S+   G++VLT    G  KHL L ++ +G  R +   F S+  ++ +  QN +
Sbjct: 33 GVFLVRQSETRRGEFVLTFNFQGRAKHLRLTLNEKGQCRVQHLWFPSIFDMLEHFRQNPI 92

Query: 74 PIIS 77
          P+ S
Sbjct: 93 PLES 96

The SH2B adapter protein family has 3 members: SH2B1 (SH2-B, PSM), SH2B2 (APS), and SH2B3 (Lnk). SH2B family members contain a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. SH2B3 negatively regulates lymphopoiesis and early hematopoiesis. The lnk-deficiency results in enhanced production of B cells, and expansion as well as enhanced function of hematopoietic stem cells (HSCs), demonstrating negative regulatory functions of Sh2b3/Lnk in cytokine signaling. Sh2b3/Lnk also functions in responses controlled by cell adhesion and in crosstalk between integrin- and cytokine-mediated signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 40.2 bits (94), Expect = 9e-06
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
          +GDFL+R+S+ +PG Y ++    G  KH  +   + V     R F ++  LV ++   + 
Sbjct: 23 EGDFLIRDSESNPGDYSVSLKAPGRNKHFKVQVVDNVYCIGQRKFHTMDELVEHY--KKA 80

Query: 74 PIISAE 79
          PI ++E
Sbjct: 81 PIFTSE 86

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 40.8 bits (96), Expect = 9e-06
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM-FESVSHLVNYHCQNQ 72
           DG FLVR++    G Y LT  +GG  K + +   +G     D + F SV  L+NY+  N 
Sbjct: 28  DGTFLVRDASTMKGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFNSVVELINYYRNNS 87

Query: 73  LPIISAESALILRNPVAK 90
           L   + +  + L  PV++
Sbjct: 88  LAEYNRKLDVKLLYPVSR 105

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 13 QDGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEGVV-RTKDRMFESVSHLV 65
           DG +L+RES    G Y L+  + G  K + L  D +       ++ F+++  LV
Sbjct: 26 SDGSYLIRESSRDDGYYTLSLRFNGKVKNYKLYYDGKNHYHYVGEKRFDTIHDLV 80

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ SPG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 23 RPDGAFLIRESESSPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRT 82

Query: 71 NQLPIISAESALILR 85
               +S    + LR
Sbjct: 83 TS---VSRNQQIFLR 94

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 38.2 bits (89), Expect = 6e-05
 Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 9/94 (9%)

Query: 1  MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLT--GYQGGTKKHLLLI---DPEGVVRTK 54
          ++RI A++     ++G +LVR S+ +   Y L+    +G    H+ +      + ++   
Sbjct: 8  ITRIEAESLLRPCKEGSYLVRNSESTKQDYSLSLKSAKGFM--HMRIQRNETGQYILGQF 65

Query: 55 DRMFESVSHLVNYHCQNQLPIISAESALILRNPV 88
           R FE++  ++ ++C N+LP+  AE   +L  PV
Sbjct: 66 SRPFETIPEMIRHYCLNKLPVRGAEHMCLLE-PV 98

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198197 cd09944, SH2_Grb7_family, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 38.2 bits (89), Expect = 7e-05
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI---DPEGVVRTKDR---MFESVSHLVNY 67
          DG FLVRESQ +PG +VL+   G   KH  +I   D      T D     F  +  LV +
Sbjct: 28 DGVFLVRESQSNPGAFVLSLKHGQKIKHYQIIPIEDEGQWYFTLDDGVTKFYDLLQLVEF 87

Query: 68 HCQNQ--LP 74
          +  N   LP
Sbjct: 88 YQLNAGSLP 96

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. There are 3 members of the Grb7 family of proteins: Grb7, Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR). Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198272 cd10409, SH2_Nck2, Src homology 2 (SH2) domain found in Nck

 Score = 38.1 bits (88), Expect = 8e-05
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
          +GDFL+R+S+ SP  + ++    G  KH  +   + V     R F S+  LV ++   + 
Sbjct: 23 EGDFLIRDSESSPSDFSVSLKAVGKNKHFKVQLVDNVYCIGQRRFNSMDELVEHY--KKA 80

Query: 74 PIISAE 79
          PI ++E
Sbjct: 81 PIFTSE 86

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198268 cd10405, SH2_Vav1, Src homology 2 (SH2) domain found in the Vav1 proteins

 Score = 38.1 bits (88), Expect = 8e-05
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 5  AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSH 63
          A++   +R DG +LVR+      ++ ++       KH+ ++  EG+ R T+ + F  ++ 
Sbjct: 17 AESILANRSDGTYLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTE 76

Query: 64 LVNYHCQNQL 73
          LV ++ QN L
Sbjct: 77 LVEFYQQNSL 86

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav1 plays a role in T-cell and B-cell development and activation. It has been identified as the specific binding partner of Nef proteins from HIV-1, resulting in morphological changes, cytoskeletal rearrangements, and the JNK/SAPK signaling cascade, leading to increased levels of viral transcription and replication. Vav1 has been shown to interact with Ku70, PLCG1, Lymphocyte cytosolic protein 2, Janus kinase 2, SIAH2, S100B, Abl gene, ARHGDIB, SHB, PIK3R1, PRKCQ, Grb2, MAPK1, Syk, Linker of activated T cells, Cbl gene and EZH2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDR--MFESVSHLVNYHCQ 70
          DG FLVR S+  PG YVLT        H  + + +      D    FES+ HL+ ++ Q
Sbjct: 23 DGSFLVRYSRRRPGGYVLTLVYENHVYHFEIQNRDDKWFYIDDGPYFESLEHLIEHYTQ 81

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|198183 cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 19/85 (22%)

Query: 11  SRQDGDFLVRESQGSPGQ--YVLT------------GYQGGTKKHLLLIDPEGVVRTKDR 56
           S +DG FLVR+S G      Y L              +   T+++ L     G     + 
Sbjct: 30  SNKDGTFLVRDSSGKDSSQPYTLMVLYNDKVYNIQIRFLENTRQYAL-----GTGLRGEE 84

Query: 57  MFESVSHLVNYHCQNQLPIISAESA 81
            F SV+ ++ +H +  L +I  +  
Sbjct: 85  TFSSVAEIIEHHQKTPLLLIDGKDN 109

BLNK (also known as SLP-65 or BASH) is an important adaptor protein expressed in B-lineage cells. BLNK consists of a N-terminal sterile alpha motif (SAM) domain and a C-terminal SH2 domain. BLNK is a cytoplasmic protein, but a part of it is bound to the plasma membrane through an N-terminal leucine zipper motif and transiently bound to a cytoplasmic domain of Iga through its C-terminal SH2 domain upon B cell antigen receptor (BCR)-stimulation. A non-ITAM phosphotyrosine in Iga is necessary for the binding with the BLNK SH2 domain and/or for normal BLNK function in signaling and B cell activation. Upon phosphorylation BLNK binds Btk and PLCgamma2 through their SH2 domains and mediates PLCgamma2 activation by Btk. BLNK also binds other signaling molecules such as Vav, Grb2, Syk, and HPK1. BLNK has been shown to be necessary for BCR-mediated Ca2+ mobilization, for the activation of mitogen-activated protein kinases such as ERK, JNK, and p38 in a chicken B cell line DT40, and for activation of transcription factors such as NF-AT and NF-kappaB in human or mouse B cells. BLNK is involved in B cell development, B cell survival, activation, proliferation, and T-independent immune responses. BLNK is structurally homologous to SLP-76. SLP-76 and (linker for activation of T cells) LAT are adaptor/linker proteins in T cell antigen receptor activation and T cell development. BLNK interacts with many downstream signaling proteins that interact directly with both SLP-76 and LAT. New data suggest functional complementation of SLP-76 and LAT in T cell antigen receptor function with BLNK in BCR function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 121

>gnl|CDD|198271 cd10408, SH2_Nck1, Src homology 2 (SH2) domain found in Nck

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 5  AKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSH 63
          A+ A   R  +GDFL+R+S+ SP  + ++    G  KH  +   E V     R F S+  
Sbjct: 13 AEMALNERGNEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKECVYCIGQRKFSSMEE 72

Query: 64 LVNYHCQNQLPIISAE 79
          LV ++   + PI ++E
Sbjct: 73 LVEHY--KKAPIFTSE 86

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198273 cd10410, SH2_SH2B1, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 36.5 bits (84), Expect = 3e-04
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 15 GDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
          G FLVR+S+   G+YVLT  +QG  K   L ++ EG  R +   F+S+  ++ +   + +
Sbjct: 33 GVFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNEEGQCRVQHLWFQSIFDMLEHFRVHPI 92

Query: 74 PIISA 78
          P+ S 
Sbjct: 93 PLESG 97

SH2B1 (SH2-B, PSM), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198274 cd10411, SH2_SH2B2, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 36.5 bits (84), Expect = 3e-04
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 11 SRQDGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHC 69
           R  G F++R+S+  PG+YVLT  +QG  K   L ++  G    +   F+SV  ++ +  
Sbjct: 29 PRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFH 88

Query: 70 QNQLPIIS 77
           + +P+ S
Sbjct: 89 THPIPLES 96

SH2B2 (APS), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B1 and SH2B2 function in signaling pathways found downstream of growth hormone receptor and receptor tyrosine kinases, including the insulin, insulin-like growth factor-I (IGF-I), platelet-derived growth factor (PDGF), nerve growth factor, hepatocyte growth factor, and fibroblast growth factor receptors. SH2B2beta, a new isoform of SH2B2, is an endogenous inhibitor of SH2B1 and/or SH2B2 (SH2B2alpha), negatively regulating insulin signaling and/or JAK2-mediated cellular responses. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG---VVRTKDRMFESVSHLVNYH 68
           +DG FLVR S+  P  + ++    G  KH   I  EG   V+ T    FES+  LV+Y+
Sbjct: 24 PRDGAFLVRPSETDPNSFAISFRAEGKIKH-CRIKQEGRLFVIGTSQ--FESLVELVSYY 80

Query: 69 CQNQL 73
           ++ L
Sbjct: 81 EKHPL 85

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198216 cd10353, SH2_Nterm_RasGAP, N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 36.0 bits (83), Expect = 4e-04
 Identities = 18/58 (31%), Positives = 28/58 (48%)

Query: 11 SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYH 68
          + + G +L+RES   PG +VL+        H  +I   G      R F S+S L+ Y+
Sbjct: 38 AGKLGSYLIRESDRRPGSFVLSFLSRTGVNHFRIIAMCGDYYIGGRRFSSLSDLIGYY 95

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general the longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the N-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYH 68
            G FLVRES  +PG Y L+       KH  +I           R F S+  +++ +
Sbjct: 21 GPGSFLVRESDNTPGDYSLSFRVNEGIKHFKIIPTGNNQFMMGGRYFSSLDDVIDRY 77

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM--FESVSHLV 65
           +DG FLVRES   PG Y L     G  +H  +I   G + T D    FE++  LV
Sbjct: 22 PEDGLFLVRESTNYPGDYTLCVSFEGKVEHYRVIYRNGKL-TIDEEEYFENLIQLV 76

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 34.7 bits (80), Expect = 9e-04
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 11 SRQDGDFLVRESQGSPGQYVLTGYQGGTKKH 41
            +DG FLVRES  +PG YVL+    G   H
Sbjct: 21 GGRDGLFLVRESTSAPGDYVLSLLAQGEVLH 51

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|198275 cd10412, SH2_SH2B3, Src homology 2 (SH2) domain found in SH2B adapter proteins (SH2B1, SH2B2, SH2B3)

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE-GVVRTKDRMFESVSHLVNYHCQNQL 73
          G FLVR+S+   G+YVLT    G  KHL L   E G  R +   F SV  ++++  ++ +
Sbjct: 33 GVFLVRQSETRRGEYVLTFNFQGRAKHLRLSLTERGQCRVQHLHFPSVVDMLHHFQRSPI 92

Query: 74 PI 75
          P+
Sbjct: 93 PL 94

SH2B3 (Lnk), like other members of the SH2B adapter protein family, contains a pleckstrin homology domain, at least one dimerization domain, and a C-terminal SH2 domain which binds to phosphorylated tyrosines in a variety of tyrosine kinases. SH2B3 negatively regulates lymphopoiesis and early hematopoiesis. The lnk-deficiency results in enhanced production of B cells, and expansion as well as enhanced function of hematopoietic stem cells (HSCs), demonstrating negative regulatory functions of Sh2b3/Lnk in cytokine signaling. Sh2b3/Lnk also functions in responses controlled by cell adhesion and in crosstalk between integrin- and cytokine-mediated signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|198203 cd10340, SH2_N-SH2_SHP_like, N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 17/68 (25%)

Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKH---------LLLIDPEGVVRTKDRMFESVSHL 64
          DG FL R S+ +PG + L+  +G    H           L   E         F ++S L
Sbjct: 22 DGSFLARPSKSNPGDFTLSVRRGDEVTHIKIQNTGDYYDLYGGE--------KFATLSEL 73

Query: 65 VNYHCQNQ 72
          V Y+ +  
Sbjct: 74 VQYYMEQH 81

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [IVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 33.3 bits (77), Expect = 0.004
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
          P    G FL+RES+ +PG Y L+       +G T KH  +  +D  G   T    F ++ 
Sbjct: 22 PGNPRGTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIRKLDNGGYYITTRATFPTLQ 81

Query: 63 HLVNY 67
           LV +
Sbjct: 82 ELVQH 86

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.88
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.85
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.84
KOG4637|consensus	464		99.75
KOG4226|consensus	379		99.74
KOG4792|consensus	293		99.73
KOG0790|consensus	600		99.68
KOG1264|consensus	1267		99.68
KOG4278|consensus	1157		99.65
KOG1264|consensus	1267		99.61
KOG4637|consensus	464		99.59
KOG2996|consensus	865		99.55
KOG0197|consensus	468		99.53
KOG0194|consensus	474		99.51
KOG0790|consensus	600		99.23
KOG1930|consensus	483		99.22
KOG3601|consensus	222		99.08
KOG3697|consensus	345		99.07
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	98.23
KOG3751|consensus	622		98.0
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	96.61
KOG4566|consensus	258		96.48
KOG1856|consensus	1299		96.13
KOG1856|consensus	1299		96.03
PF02762	86	Cbl_N3: CBL proto-oncogene N-terminus, SH2-like do	89.99
smart00557	93	IG_FLMN Filamin-type immunoglobulin domains. These	82.9

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.88  E-value=1.9e-21  Score=113.53  Aligned_cols=85  Identities=35%  Similarity=0.505  Sum_probs=70.0

Q ss_pred             CChHHHHhcccC-CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~-~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|.. ++|+||||.|.+.++.|+||++.++.++|++|. ..++++... ...|+||.|||+||+.+++   .
T Consensus         7 i~r~~Ae~~L~~~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~~~---~   83 (94)
T cd00173           7 ISREEAEELLKKKPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKNPL---S   83 (94)
T ss_pred             CCHHHHHHHHhcCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhCcc---C
Confidence            789996555543 799999999998789999999999999999997 445555554 6899999999999999885   2


Q ss_pred             cCcceEEcCcc
Q psy8455          78 AESALILRNPV   88 (101)
Q Consensus        78 ~~~~~~L~~Pv   88 (101)
                      ....+.|..|+
T Consensus        84 ~~~~~~L~~p~   94 (94)
T cd00173          84 DGLGVKLRYPV   94 (94)
T ss_pred             CCcccEeCCcC
Confidence            34567888886

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>smart00252 SH2 Src homology 2 domains

Probab=99.85  E-value=2.2e-20  Score=107.29  Aligned_cols=73  Identities=36%  Similarity=0.525  Sum_probs=62.6

Q ss_pred             CChHHHHhcccC-CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCc
Q psy8455           1 MSRIAKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQL   73 (101)
Q Consensus         1 isR~~a~~~Ll~-~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~   73 (101)
                      |+|++|++.|.. .+|+||||.|++.++.|+||++.++.++||+|. ..+|.|.+++ ..|+||.+||+||+.+++
T Consensus         8 i~r~~Ae~lL~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~~~~   83 (84)
T smart00252        8 ISREEAEKLLKNEGDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQKNSL   83 (84)
T ss_pred             CCHHHHHHHHhcCCCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhhCCC
Confidence            689996666654 389999999998788999999999999999997 4447777776 899999999999998764

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.84  E-value=1.2e-20  Score=106.81  Aligned_cols=68  Identities=34%  Similarity=0.465  Sum_probs=57.8

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEe-CCcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRT-KDRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~-~~~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|..  ++|+||||.|.+.+|.|+||++.++.+.|++|. ..++.|.+ ++..|+||.+||+||
T Consensus         6 isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y   77 (77)
T PF00017_consen    6 ISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY   77 (77)
T ss_dssp             SHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence            689997666654  599999999998889999999999999999996 55564555 458899999999998

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG4637|consensus

Probab=99.75  E-value=1.4e-18  Score=121.00  Aligned_cols=95  Identities=26%  Similarity=0.372  Sum_probs=84.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |||+++.+.|. ++||+||||+..+-+|+|+|+++.+|..+-++|...+|.|-|. .-.|.|+.+||+||+..++..+++
T Consensus        30 isReev~~~L~d~PDGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelIn~yr~~SL~~yN~  109 (464)
T KOG4637|consen   30 ISREEVNKKLRDQPDGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELINHYRNESLAQYNP  109 (464)
T ss_pred             cCHHHHHHHhcCCCCCcEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHHHHHhhhHHHhhCc
Confidence            78999777777 6799999999888899999999999999999998778877665 479999999999999999999888


Q ss_pred             CcceEEcCccccCCCCC
Q psy8455          79 ESALILRNPVAKCATGA   95 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~~~~   95 (101)
                      ...++|.+||.+..+.+
T Consensus       110 ~LDvrLlyPVs~~r~dq  126 (464)
T KOG4637|consen  110 KLDVRLLYPVSRYRQDQ  126 (464)
T ss_pred             ccceeeechHHHhhhcc
Confidence            89999999999865543

>KOG4226|consensus

Probab=99.74  E-value=1.1e-17  Score=113.11  Aligned_cols=90  Identities=22%  Similarity=0.357  Sum_probs=76.4

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|.+|+..|-  -.+|+||||+|++.||+|.+|++..++-+||+++..++.|.++++.|.++.+||+||++.++--...
T Consensus       288 itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq~~d~~ycIGqRkF~tmd~Lv~HY~kaPIfts~q  367 (379)
T KOG4226|consen  288 ITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQLVDNVYCIGQRKFHTMDELVEHYKKAPIFTSEQ  367 (379)
T ss_pred             ccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEEEecceEEeccceeccHHHHHHhhhcCCceecCC
Confidence            68999555442  2599999999999999999999999999999999778999999999999999999999987654334


Q ss_pred             CcceEEcCcccc
Q psy8455          79 ESALILRNPVAK   90 (101)
Q Consensus        79 ~~~~~L~~Pv~~   90 (101)
                      ++...|..|+++
T Consensus       368 gEKLyLvr~Lpk  379 (379)
T KOG4226|consen  368 GEKLYLVRALPK  379 (379)
T ss_pred             CceEEEeccCCC
Confidence            667788887753

>KOG4792|consensus

Probab=99.73  E-value=1.2e-17  Score=110.29  Aligned_cols=87  Identities=30%  Similarity=0.488  Sum_probs=74.2

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEEC--CC------CeEEeCCcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID--PE------GVVRTKDRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~--~~------~~~~~~~~~F~sl~~LI~~y~~~   71 (101)
                      |||+||.+.|. ++.|.||||+|.+.||+|+|+|+-+.+|.||.|..  ..      ..|.+++..|++|+.|++||+-+
T Consensus        18 mSRqeA~~lL~~~r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIgdQ~Fd~lPaLL~fykih   97 (293)
T KOG4792|consen   18 MSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIGDQEFDSLPALLEFYKIH   97 (293)
T ss_pred             ccHHHHHHHhcCcceeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeeccccccchHHHHhheeEe
Confidence            79999766665 46999999999999999999999999999999963  11      26888999999999999999988


Q ss_pred             CcCccccCcceEEcCccccCCC
Q psy8455          72 QLPIISAESALILRNPVAKCAT   93 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~~~   93 (101)
                      -+.      .+.|+.|.+|...
T Consensus        98 yLd------tttLi~p~~r~~~  113 (293)
T KOG4792|consen   98 YLD------TTTLIEPAKRSRQ  113 (293)
T ss_pred             eec------ccccccccccccc
Confidence            763      3679999988765

>KOG0790|consensus

Probab=99.68  E-value=1.1e-16  Score=114.14  Aligned_cols=90  Identities=27%  Similarity=0.387  Sum_probs=73.5

Q ss_pred             CChHHHHhccc-C--CCCcEEEEeeCCCCCCEEEEEEeCC---------eEEEEEEECCCCeEEeCC-cccCCHHHHHHH
Q psy8455           1 MSRIAKTAFPS-R--QDGDFLVRESQGSPGQYVLTGYQGG---------TKKHLLLIDPEGVVRTKD-RMFESVSHLVNY   67 (101)
Q Consensus         1 isR~~a~~~Ll-~--~~G~FLvR~s~~~~g~~~Lsv~~~~---------~~~h~~I~~~~~~~~~~~-~~F~sl~~LI~~   67 (101)
                      ++-.+ ||.|+ .  ++|+||||+|.+.||+|+||++.+.         +|.|+.|++.++.|.+++ ..|+|+.+||+|
T Consensus       117 Lsgke-AekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~sltdLidh  195 (600)
T KOG0790|consen  117 LSGKE-AEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFDSLTDLVEH  195 (600)
T ss_pred             CCchh-HHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccchHHHHHHH
Confidence            45677 56666 2  5999999999999999999999865         899999998889999975 899999999999


Q ss_pred             HhhCCcCccccCcceEEcCccccCC
Q psy8455          68 HCQNQLPIISAESALILRNPVAKCA   92 (101)
Q Consensus        68 y~~~~~~l~~~~~~~~L~~Pv~~~~   92 (101)
                      |++++.-.. .+.-..|+.|.....
T Consensus       196 ykknpmvEt-~gtvv~LrqP~naTr  219 (600)
T KOG0790|consen  196 YKKNPMVET-LGTVVYLRQPLNATR  219 (600)
T ss_pred             hccCchhhh-cceeEEeeccccccc
Confidence            999987542 234457888887443

>KOG1264|consensus

Probab=99.68  E-value=1.2e-16  Score=120.10  Aligned_cols=91  Identities=27%  Similarity=0.382  Sum_probs=75.8

Q ss_pred             hHHHHhcccC-------CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE--CCCC---eEEeCCcccCCHHHHHHHHhh
Q psy8455           3 RIAKTAFPSR-------QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI--DPEG---VVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         3 R~~a~~~Ll~-------~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~--~~~~---~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      |.+|+..|..       +||+||||+|++..|+|+||+..+|++.|++|+  ..+|   +|..++..|+||.+||.||+.
T Consensus       544 R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~  623 (1267)
T KOG1264|consen  544 RTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRE  623 (1267)
T ss_pred             chHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHh
Confidence            7785444432       499999999999999999999999999999996  3344   567788999999999999999


Q ss_pred             CCcCccccCcceEEcCccccCCCCC
Q psy8455          71 NQLPIISAESALILRNPVAKCATGA   95 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~~~~~~   95 (101)
                      +.+  .+....++|..||+++.++.
T Consensus       624 ~~L--r~aeF~m~LtePvPqp~~He  646 (1267)
T KOG1264|consen  624 THL--RCAEFEMRLTEPVPQPNPHE  646 (1267)
T ss_pred             ccc--cccceEEEecCCCCCCCccc
Confidence            877  45567899999999887754

>KOG4278|consensus

Probab=99.65  E-value=5.4e-16  Score=115.23  Aligned_cols=91  Identities=31%  Similarity=0.416  Sum_probs=76.8

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCe-EEeCCcccCCHHHHHHHHhhCCcCcc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGV-VRTKDRMFESVSHLVNYHCQNQLPII   76 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~-~~~~~~~F~sl~~LI~~y~~~~~~l~   76 (101)
                      +||.. +|.+|.  -+|+||||+|++.+|+|.+|++++|.|.||+|+ +.+|. |......|.+|.|||.||....+++.
T Consensus       159 vSRsa-aEy~LsSgInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLi  237 (1157)
T KOG4278|consen  159 VSRSA-AEYILSSGINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLI  237 (1157)
T ss_pred             cccch-hhhhhhcCcccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHHHhhcccccccee
Confidence            57887 677774  499999999999999999999999999999997 55664 66667899999999999999988775


Q ss_pred             ccCcceEEcCccccCCCCCCC
Q psy8455          77 SAESALILRNPVAKCATGAHT   97 (101)
Q Consensus        77 ~~~~~~~L~~Pv~~~~~~~~~   97 (101)
                           ++|.+|.++.+.+-..
T Consensus       238 -----ttLhYPApK~nKptvy  253 (1157)
T KOG4278|consen  238 -----TTLHYPAPKKNKPTVY  253 (1157)
T ss_pred             -----EeeeccCccCCCCcee
Confidence                 7899999987655433

>KOG1264|consensus

Probab=99.61  E-value=1.8e-15  Score=113.97  Aligned_cols=85  Identities=26%  Similarity=0.374  Sum_probs=71.5

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      .+|++|++.|+  ..||+||||.++. +..|+||++.+|+++|++|...+..|.++...|+|+.+||+||.++++  +  
T Consensus       655 ~treqAE~mL~rvp~DGaFLiR~~~~-~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~FesLv~lv~yY~k~~l--y--  729 (1267)
T KOG1264|consen  655 LTREQAEDMLMRVPRDGAFLIRKREG-SNSYAISFRARGKIKHCRINRDGRHFVLGTSAFESLVELVSYYEKHPL--Y--  729 (1267)
T ss_pred             ccHHHHHHHHhhCccCcceEEEeccC-CceEEEEEEEcCcEeEEEEccCceEEEeccHHHHHHHHHHHHHhcChh--h--
Confidence            37899777666  3699999995544 678999999999999999987667889999999999999999999876  3  


Q ss_pred             CcceEEcCccccC
Q psy8455          79 ESALILRNPVAKC   91 (101)
Q Consensus        79 ~~~~~L~~Pv~~~   91 (101)
                       ..+.|++||+..
T Consensus       730 -R~mkLr~PVnee  741 (1267)
T KOG1264|consen  730 -RKMKLRYPVNEE  741 (1267)
T ss_pred             -hcccccCcCCHH
Confidence             468899999753

>KOG4637|consensus

Probab=99.59  E-value=3.1e-15  Score=104.50  Aligned_cols=91  Identities=26%  Similarity=0.354  Sum_probs=73.0

Q ss_pred             ChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCcccc
Q psy8455           2 SRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         2 sR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      .|..|++.|. .++|+||||+|. +.|.|+|||..++.|+|+.|. +..|+-+-+. ..+.||.+||.||+..++.-.+.
T Consensus       340 ~r~kAe~llrg~~dGtFLIR~ss-~~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~hY~h~SLe~HnD  418 (464)
T KOG4637|consen  340 NRDKAEELLRGKPDGTFLIRESS-KGGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYSTLKELVLHYQHTSLEQHND  418 (464)
T ss_pred             hHHHHHHHhcCCCCCeEEEeecc-CCCceEEEEEECCceeeeEEeeccccccccchhHHHHHHHHHHHHHhhhhHHhhcc
Confidence            4778666554 579999999964 468999999999999999996 6667544333 68899999999999999877666


Q ss_pred             CcceEEcCccccCCC
Q psy8455          79 ESALILRNPVAKCAT   93 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~~   93 (101)
                      ...++|..||.-+.+
T Consensus       419 al~ttLr~Pv~~~~~  433 (464)
T KOG4637|consen  419 ALTTTLRYPVFAQVT  433 (464)
T ss_pred             ccccccccceecccC
Confidence            777899999976533

>KOG2996|consensus

Probab=99.55  E-value=6.6e-15  Score=107.88  Aligned_cols=90  Identities=23%  Similarity=0.342  Sum_probs=76.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |-|++|+..|. ..+|+||||.+....+.|++|++++..++|++|.+.+|++.+ +...|.|+.|||+||+.+++...-+
T Consensus       692 MERaqaes~Lk~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELVeyYq~~sLke~Fk  771 (865)
T KOG2996|consen  692 MERAQAESTLKNRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELVEYYQSHSLKEIFK  771 (865)
T ss_pred             HhhhhhhhHhhcCCCceEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHHHHHHhccHHHHHH
Confidence            45888655555 469999999998777899999999999999999877898776 4699999999999999999866556


Q ss_pred             CcceEEcCcccc
Q psy8455          79 ESALILRNPVAK   90 (101)
Q Consensus        79 ~~~~~L~~Pv~~   90 (101)
                      ...++|++|...
T Consensus       772 ~LDTtLk~Pyke  783 (865)
T KOG2996|consen  772 ALDTTLKFPYKE  783 (865)
T ss_pred             HhhhhhcCCCcC
Confidence            677889999874

>KOG0197|consensus

Probab=99.53  E-value=3.5e-14  Score=102.52  Aligned_cols=85  Identities=32%  Similarity=0.451  Sum_probs=70.0

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCC------eEEEEEEE-CCCCeEE--eC-CcccCCHHHHHHH
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGG------TKKHLLLI-DPEGVVR--TK-DRMFESVSHLVNY   67 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~------~~~h~~I~-~~~~~~~--~~-~~~F~sl~~LI~~   67 (101)
                      |||++|++.|+.   ..|+||||+|++.+|.|+||++...      .++|++|+ ..+|.+.  +. ...|+++.+||+|
T Consensus        88 isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~  167 (468)
T KOG0197|consen   88 ISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNY  167 (468)
T ss_pred             ccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhh
Confidence            799998877773   3599999999999999999999865      89999996 4444333  43 5899999999999


Q ss_pred             HhhCCcCccccCcceEEcCcccc
Q psy8455          68 HCQNQLPIISAESALILRNPVAK   90 (101)
Q Consensus        68 y~~~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      |+.++.+++     ..|..||..
T Consensus       168 ~~~~~~gl~-----~~l~~p~~~  185 (468)
T KOG0197|consen  168 YSKNADGLC-----TRLRDPCSK  185 (468)
T ss_pred             hhccCcchh-----hcccCchhc
Confidence            999998775     568888875

>KOG0194|consensus

Probab=99.51  E-value=1.6e-13  Score=99.78  Aligned_cols=89  Identities=28%  Similarity=0.417  Sum_probs=72.5

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCC---CE-EEEEEeC--CeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPG---QY-VLTGYQG--GTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQL   73 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g---~~-~Lsv~~~--~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~   73 (101)
                      |.|++ ++.||+.+||||||.++..+|   .+ +||+.+.  .+++||.|+..++++..+ ...|++|.+||.||+.+..
T Consensus        56 l~red-~~~lL~~~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li~~~~~~~~  134 (474)
T KOG0194|consen   56 LPRED-AEKLLKNDGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELVNYYKFSKL  134 (474)
T ss_pred             ccHhH-HHHHhCCCCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHHHHHHhccc
Confidence            57899 788889999999999988765   23 8999985  788999998545555555 4899999999999999998


Q ss_pred             CccccCcceEEcCccccCC
Q psy8455          74 PIISAESALILRNPVAKCA   92 (101)
Q Consensus        74 ~l~~~~~~~~L~~Pv~~~~   92 (101)
                      ++.  .....|+.|+.|+.
T Consensus       135 ~~~--~~~~~L~~PI~r~~  151 (474)
T KOG0194|consen  135 EIT--GKNFFLKRPIPRQK  151 (474)
T ss_pred             cee--ccceeecccccccc
Confidence            874  23447999999865

>KOG0790|consensus

Probab=99.23  E-value=2.3e-11  Score=87.31  Aligned_cols=92  Identities=20%  Similarity=0.385  Sum_probs=70.7

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+-.+|++.|..  .+|+||.|.|++.||.|+|+++.++++.|++|+..++.|.+ ++..|.+++|||+||+...-.+..
T Consensus        11 ~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyyme~~~~lke   90 (600)
T KOG0790|consen   11 LSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYMEHHGQLKE   90 (600)
T ss_pred             ccchhHHHHHHHhccccchhhccccCCCcceeEEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHHhhhHHHHh
Confidence            355675444443  49999999999999999999999999999999865555654 679999999999999887643321


Q ss_pred             -cCcceEEcCccccCC
Q psy8455          78 -AESALILRNPVAKCA   92 (101)
Q Consensus        78 -~~~~~~L~~Pv~~~~   92 (101)
                       .+.-+-|++|+.=.+
T Consensus        91 kng~~ielK~pl~cAd  106 (600)
T KOG0790|consen   91 KNGDVIELKYPLNCAD  106 (600)
T ss_pred             cCCCEEEecCCCccCC
Confidence             234567899886433

>KOG1930|consensus

Probab=99.22  E-value=3.9e-11  Score=85.19  Aligned_cols=84  Identities=30%  Similarity=0.414  Sum_probs=63.9

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeC---------------CeEEEEEEE-CCCCeEEe----CCcccC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQG---------------GTKKHLLLI-DPEGVVRT----KDRMFE   59 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~---------------~~~~h~~I~-~~~~~~~~----~~~~F~   59 (101)
                      |+|++|++.|. +++|+|+||+|.+.+|.|-|.++..               ..|+||.|. ...|. -+    +...|.
T Consensus       219 isREQAIalLrdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGV-kLKGC~nEP~FG  297 (483)
T KOG1930|consen  219 ISREQAIALLRDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGV-KLKGCDNEPVFG  297 (483)
T ss_pred             CCHHHHHHHhhcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCce-eccCCCCCCccc
Confidence            79999998877 5699999999999999999999752               358999997 44553 33    237999


Q ss_pred             CHHHHHHHHhhCCcCccccCcceEEcCcccc
Q psy8455          60 SVSHLVNYHCQNQLPIISAESALILRNPVAK   90 (101)
Q Consensus        60 sl~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      ||..||--|.-..+     ..+|+|.-|-..
T Consensus       298 SLSALV~QHSIt~L-----ALPckL~iP~rD  323 (483)
T KOG1930|consen  298 SLSALVYQHSITAL-----ALPCKLVIPDRD  323 (483)
T ss_pred             hhHHHHhhccchhh-----hcceeEeccCCC
Confidence            99999955554444     356778766543

>KOG3601|consensus

Probab=99.08  E-value=1.7e-11  Score=80.32  Aligned_cols=73  Identities=27%  Similarity=0.362  Sum_probs=64.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEE-ECCCCeEEeCCcccCCHHHHHHHHhhCCc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLVNYHCQNQL   73 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I-~~~~~~~~~~~~~F~sl~~LI~~y~~~~~   73 (101)
                      |+|..|++.|+ +++|+||+|.++..||.|.++++....+.|+++ +...|.|......|.|+.++++||..+..
T Consensus        65 i~r~~ae~~l~~~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~  139 (222)
T KOG3601|consen   65 IPRPLAEDLLSKKRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQ  139 (222)
T ss_pred             cccchhhhhhhccCcchhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCccccc
Confidence            57888766666 579999999999999999999999999999988 46678888888999999999999988764

>KOG3697|consensus

Probab=99.07  E-value=2.6e-10  Score=77.87  Aligned_cols=69  Identities=67%  Similarity=1.066  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCccccCcceEEcCccccC
Q psy8455          23 QGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAKC   91 (101)
Q Consensus        23 ~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      .+.+|+|+|+-...+..+|..+.+++|.....+..|+||..||.||..+.+||.+.++...|.+||.|+
T Consensus       276 ~~~~gqyvltgl~~~~~khlllvdpegvvrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r~  344 (345)
T KOG3697|consen  276 TTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVERK  344 (345)
T ss_pred             cCCCccEEEecccCCCcceEEEECCccceecccchhhHHHHHHHHhhhccCceecCcchhhhhCccccc
Confidence            345788999999999999999999999888889999999999999999999999999999999999875

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=98.23  E-value=1.8e-05  Score=52.99  Aligned_cols=70  Identities=16%  Similarity=0.350  Sum_probs=50.3

Q ss_pred             CChHHHHhcccC-CCCcEEEEeeCCCCCCEEEEEEe-CCeEEEEEEE--C-CC----C-eEEeCCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQ-GGTKKHLLLI--D-PE----G-VVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~-~~G~FLvR~s~~~~g~~~Lsv~~-~~~~~h~~I~--~-~~----~-~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      ++-.+|++.|-. ..|+++||.|+.....-+++++. ++...|+-|.  . .+    | ...+++..|++|.|||.-|..
T Consensus        44 ~~~~qAe~~L~~~~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~~~yeDLDEii~r~V~  123 (220)
T PF14633_consen   44 FNYKQAEEYLADQDVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGGEEYEDLDEIIARHVE  123 (220)
T ss_dssp             S-HHHHHHHHCCS-TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETTEEESSHHHHHHHCHH
T ss_pred             CCHHHHHHHHhcCCCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECCeEECCHHHHHHHHHH
Confidence            356787777664 47999999998866667888876 6777899995  2 11    2 467788999999999998844

>KOG3751|consensus

Probab=98.00  E-value=1.2e-06  Score=64.42  Aligned_cols=74  Identities=28%  Similarity=0.403  Sum_probs=58.9

Q ss_pred             CChHHHHhcccCC----CCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE--CCCC-eEE-eC--CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSRQ----DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI--DPEG-VVR-TK--DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~~----~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~--~~~~-~~~-~~--~~~F~sl~~LI~~y~~   70 (101)
                      |+|+| ..+++++    +|.|++|+|.+.|..|++++....+++||+|.  ..+| .|. .+  ...|.++..|+++|+-
T Consensus       526 is~~e-s~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~~ql~~~~ql  604 (622)
T KOG3751|consen  526 ISRDE-SQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFSDLIQLVEFYQL  604 (622)
T ss_pred             cCchh-hhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCccccccccccchhhc
Confidence            68888 5556642    89999999999998899999999999999996  3344 333 33  2799999999999998


Q ss_pred             CCcCc
Q psy8455          71 NQLPI   75 (101)
Q Consensus        71 ~~~~l   75 (101)
                      ++-++
T Consensus       605 ~k~~l  609 (622)
T KOG3751|consen  605 NKGVL  609 (622)
T ss_pred             CCCcc
Confidence            86444

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=96.61  E-value=0.0082  Score=40.34  Aligned_cols=56  Identities=21%  Similarity=0.438  Sum_probs=40.5

Q ss_pred             CcEEEEeeCCCCCCEEEEEEeCCeEEEEE--EE-CCCCeEEeCCcccCCHHHHHHHHhhC
Q psy8455          15 GDFLVRESQGSPGQYVLTGYQGGTKKHLL--LI-DPEGVVRTKDRMFESVSHLVNYHCQN   71 (101)
Q Consensus        15 G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~--I~-~~~~~~~~~~~~F~sl~~LI~~y~~~   71 (101)
                      -.|.+..+...||.|.|+...+...+|..  |. .++| |.+.+..|+++.+|+.+++.+
T Consensus       161 i~Y~f~~~~~~PG~F~L~y~~~~~~~~~~~~v~V~p~G-f~~r~~~f~~~~~L~~~FK~~  219 (220)
T PF14633_consen  161 IPYAFCISKEHPGYFILSYKPNKNPRHEYWPVKVTPDG-FRFRKQVFPSLDRLINWFKKH  219 (220)
T ss_dssp             -EEEEEE-TTSTTEEEEEEESSTTS-EEEEEEEE-SSS-EEETTEEESSHHHHHHHHHHH
T ss_pred             ceEEEEECCCCCCEEEEEEEcCCCCceEEeeEEEecCc-EEEecccCCCHHHHHHHHhhc
Confidence            36777778888999999998865544443  64 5566 566889999999999998763

>KOG4566|consensus

Probab=96.48  E-value=0.0069  Score=41.58  Aligned_cols=71  Identities=21%  Similarity=0.246  Sum_probs=51.7

Q ss_pred             ChHHHHhcccC-CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe------CC--cccCCHHHHHHHHhhCC
Q psy8455           2 SRIAKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT------KD--RMFESVSHLVNYHCQNQ   72 (101)
Q Consensus         2 sR~~a~~~Ll~-~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~------~~--~~F~sl~~LI~~y~~~~   72 (101)
                      +.++|++.|-+ ..|.|+||++...+-.+.|++....+.+..+|...++.|..      ..  ..|+++..++.+|....
T Consensus        60 ~~~~~~~~l~~~p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~sfr~ds~~~~~~pl~~~e~~~~~~~~y~~~~  139 (258)
T KOG4566|consen   60 TANEAELCLGQEPRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDSSFRLDSSHRHTPPLISFEDVEVLIHHYRQSR  139 (258)
T ss_pred             cchhHHHhhcCCCccceeeecCcCccccceeEeeeccCCCCccccccccceecccccccCCCcccChhHHHHHHhhhhhh
Confidence            34564455543 47999999998877788999999888888888644443332      22  58999999999995544

>KOG1856|consensus

Probab=96.13  E-value=0.015  Score=46.99  Aligned_cols=69  Identities=19%  Similarity=0.283  Sum_probs=49.9

Q ss_pred             ChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEe-CCeEEEEEEE--CCC------CeEEeCCcccCCHHHHHHHHhh
Q psy8455           2 SRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQ-GGTKKHLLLI--DPE------GVVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         2 sR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~-~~~~~h~~I~--~~~------~~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      +-++|+..|- ...|.++||.|+.....-+++++. ++...|+-|+  ..+      +..++++..|..|.++|.-|..
T Consensus      1115 n~eQAe~yL~~~d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLDEiI~r~vq 1193 (1299)
T KOG1856|consen 1115 NAEQAEAYLSDMDQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLDEIIARYVQ 1193 (1299)
T ss_pred             CHHHHHHHHHhcccccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHHHHHHHHHH
Confidence            4456555444 468999999998866667777776 4667888886  222      2456678999999999988854

>KOG1856|consensus

Probab=96.03  E-value=0.025  Score=45.76  Aligned_cols=68  Identities=16%  Similarity=0.259  Sum_probs=51.9

Q ss_pred             hHHHHhccc----CCCCcEE---EEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCC
Q psy8455           3 RIAKTAFPS----RQDGDFL---VRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQ   72 (101)
Q Consensus         3 R~~a~~~Ll----~~~G~FL---vR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~   72 (101)
                      +++ .+.+|    ..++.+.   ...|...||.|.|+.+.+.+++|--|. .++| |.+.+..|+++.+|..|++.+-
T Consensus      1213 ~~~-~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~heyv~v~p~g-~~~rg~~f~tld~L~~~FK~h~ 1288 (1299)
T KOG1856|consen 1213 KKE-VEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPRHEYVKVVPEG-FRFRGQNFGTLDELCRWFKRHY 1288 (1299)
T ss_pred             HHH-HHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCccceeEEEcccc-eEEecccchhHHHHHHHHHHHh
Confidence            445 55555    2355444   457888899999999999999998775 5555 6678899999999999998764

>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface

Probab=89.99  E-value=2.3  Score=24.08  Aligned_cols=33  Identities=18%  Similarity=0.149  Sum_probs=24.8

Q ss_pred             HHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeC
Q psy8455           4 IAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQG   36 (101)
Q Consensus         4 ~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~   36 (101)
                      +|..++|-   .++|+|+.|-|++.-|++++-....
T Consensus        12 devk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~   47 (86)
T PF02762_consen   12 DEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQ   47 (86)
T ss_dssp             HHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEET
T ss_pred             HHHHHHHHHHhCCcccEEEeeccccccceeEEEEcC
Confidence            44344443   5799999999999999998876553

The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....

>smart00557 IG_FLMN Filamin-type immunoglobulin domains

Probab=82.90  E-value=3.1  Score=23.78  Aligned_cols=25  Identities=36%  Similarity=0.633  Sum_probs=19.5

Q ss_pred             CCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          13 QDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        13 ~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      .+|.|.|.-....+|.|.+++.+++
T Consensus        54 ~dGty~v~y~P~~~G~~~i~V~~~g   78 (93)
T smart00557       54 GDGTYTVSYTPTEPGDYTVTVKFGG   78 (93)
T ss_pred             CCCEEEEEEEeCCCEeEEEEEEECC
Confidence            5788888877777788888887765

These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	101
1mil_A	104	Transforming Protein Length = 104		2e-26
1tce_A	107	Solution Nmr Structure Of The Shc Sh2 Domain Comple		2e-26
2kk6_A	116	Solution Structure Of Sh2 Domain Of Proto-Oncogene		1e-10
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		6e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-05
1wqu_A	114	Solution Structure Of The Human Fes Sh2 Domain Leng		3e-04
2lct_A	107	Solution Structure Of The Vav1 Sh2 Domain Complexed		3e-04
2dly_A	121	Solution Structure Of The Sh2 Domain Of Murine Fyn-		4e-04
1jyq_A	96	Xray Structure Of Grb2 Sh2 Domain Complexed With A		4e-04
2crh_A	138	Solution Structure Of The Sh2 Domain Of Human Proto		5e-04
1tze_E	98	Signal Transduction Adaptor Growth Factor, Grb2 Sh2		5e-04
3mxc_A	101	Structures Of Grb2-Sh2 Domain And Aicd Peptide Comp		5e-04
1cj1_A	96	Growth Factor Receptor Binding Protein Sh2 Domain (		5e-04
2aoa_A	99	Crystal Structures Of A High-affinity Macrocyclic P		5e-04
1zfp_E	98	Growth Factor Receptor Binding Protein Sh2 Domain C		5e-04
3n84_A	112	Crystal Structure Of The Grb2 Sh2 Domain In Complex		6e-04
1ghu_A	107	Nmr Solution Structure Of Growth Factor Receptor-Bo		6e-04
1x0n_A	104	Nmr Structure Of Growth Factor Receptor Binding Pro		6e-04
1fhs_A	112	The Three-Dimensional Solution Structure Of The Src		6e-04
3ove_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		6e-04
3imd_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		6e-04
1bmb_A	123	Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-9		6e-04
1bm2_A	117	Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acet		6e-04
1fyr_A	114	Dimer Formation Through Domain Swapping In The Crys		6e-04
2h46_E	116	Native Domain-Swapped Dimer Crystal Structure Of Th		6e-04
1gri_A	217	Grb2 Length = 217		7e-04

>pdb|1MIL|A Chain A, Transforming Protein Length = 104

Iteration: 1
 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 26  NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 85
Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 86  PIISAGSELCLQQPVER 102

>pdb|1TCE|A Chain A, Solution Nmr Structure Of The Shc Sh2 Domain Complexed With A Tyrosine-Phosphorylated Peptide From The T-Cell Receptor, Minimized Average Structure Length = 107

Iteration: 1
 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 14  DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
           +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N L
Sbjct: 26  NGDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 85
Query: 74  PIISAESALILRNPVAK 90
           PIISA S L L+ PV +
Sbjct: 86  PIISAGSELCLQQPVER 102

>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene Tyrosine- Protein Kinase Fer From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target Hr3461d Length = 116

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           ++ GDFLVRES G PG+YVL+ Y  G ++H ++   + + R +   F ++  L+++H   
Sbjct: 34  KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTT 93
Query: 72  QLPIISAESALILRNPVAK 90
           +  +I+ +S ++L NP+ K
Sbjct: 94  K-QVITKKSGVVLLNPIPK 111

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 15  GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
           GDFLVRESQG   +YVL+    G  +H ++   + + R +   F S+  L+++    Q P
Sbjct: 33  GDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQP 91
Query: 75  IISAESALILRNPVAK 90
            ++ +S ++L   V K
Sbjct: 92  -LTKKSGVVLHRAVPK 106

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 15  GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
           GDFLVRESQG   +YVL+    G  +H ++   + + R +   F S+  L+++    Q P
Sbjct: 33  GDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQP 91
Query: 75  IISAESALILRNPVAK 90
            ++ +S ++L   V K
Sbjct: 92  -LTKKSGVVLHRAVPK 106

>pdb|1WQU|A Chain A, Solution Structure Of The Human Fes Sh2 Domain Length = 114

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 15  GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
           GDFLVRESQG   +YVL+    G  +H ++   + + R +   F S+  L+++    Q P
Sbjct: 36  GDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQP 94
Query: 75  IISAESALILRNPV 88
            ++ +S ++L   V
Sbjct: 95  -LTKKSGVVLHRAV 107

>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A Syk-Derived Doubly Phosphorylated Peptide Length = 107

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 5  AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSH 63
          A++   +R DG FLVR+      ++ ++       KH+ ++  EG+ R T+ + F  ++ 
Sbjct: 21 AESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTE 80
Query: 64 LVNYHCQNQL 73
          LV ++ QN L
Sbjct: 81 LVEFYQQNSL 90

>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine Fyn-Related Kinase Length = 121

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 9  FPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVN 66
          +   Q G FL+RES+   G + L+    G  KH  +  +D  G   T+ ++F +++  VN
Sbjct: 34 YSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVN 93
Query: 67 YH 68
          Y+
Sbjct: 94 YY 95

>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly Affine Phospho Peptide Length = 96

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH
Sbjct: 23 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 80

>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto- Oncogene Protein Vav1 Length = 138

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 5   AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSH 63
           A++   +R DG FLVR+      ++ ++       KH+ ++  EG+ R T+ + F  ++ 
Sbjct: 38  AESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTE 97
Query: 64  LVNYHCQNQL 73
           LV ++ QN L
Sbjct: 98  LVEFYQQNSL 107

>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain Complexed With Phosphotyrosyl Heptapeptide Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2) Length = 98

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 24 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 83
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 84 TS---VSRNQQIFLRD 96

>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes Reveal A Conformational Switch And Their Functional Implications. Length = 101

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 27 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 86
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 87 TS---VSRNQQIFLRD 99

>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain (Human) Complexed With A Phosphotyrosyl Derivative Length = 96

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 22 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 81
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 82 TS---VSRNQQIFLRD 94

>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide Mimetic In Complex With The Grb2 Sh2 Domain Length = 99

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 24 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 83
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 84 TS---VSRNQQIFLRD 96

>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain Complexed With A Phosphotyrosyl Pentapeptide Length = 98

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 23 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 82
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 83 TS---VSRNQQIFLRD 95

>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A 23-Membered Macrocyclic Ligand Having The Sequence Pyvnvp Length = 112

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 27 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 86
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 87 TS---VSRNQQIFLRD 99

>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound Protein 2 (Grb2) Sh2 Domain, 24 Structures Length = 107

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH
Sbjct: 21 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 78

>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein Sh2 Domain Complexed With The Inhibitor Length = 104

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 23 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 82
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 83 TS---VSRNQQIFLRD 95

>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src Homology Domain-2 Of The Growth Factor Receptor Bound Protein-2, Nmr, 18 Structures Length = 112

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 27 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 86
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 87 TS---VSRNQQIFLRD 99

>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Pyxn- Derived Tripeptide Length = 117

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 26 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 85
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 86 TS---VSRNQQIFLRD 98

>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic Length = 117

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 26 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 85
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 86 TS---VSRNQQIFLRD 98

>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974) Length = 123

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
           R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 33  RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 92
Query: 71  NQLPIISAESALILRN 86
                +S    + LR+
Sbjct: 93  TS---VSRNQQIFLRD 105

>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acetyl-L-Thi Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl] (Pkf273-791) Length = 117

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
           R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 32  RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 91
Query: 71  NQLPIISAESALILRN 86
                +S    + LR+
Sbjct: 92  TS---VSRNQQIFLRD 104

>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal Structure Of The Grb2-Sh2 Ac-Pyvnv Complex Length = 114

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
           R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 31  RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 90
Query: 71  NQLPIISAESALILRN 86
                +S    + LR+
Sbjct: 91  TS---VSRNQQIFLRD 103

>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2 Sh2 Domain Length = 116

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
          R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH  
Sbjct: 26 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 85
Query: 71 NQLPIISAESALILRN 86
               +S    + LR+
Sbjct: 86 TS---VSRNQQIFLRD 98

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
           R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH
Sbjct: 78  RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 135

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	7e-32
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	3e-28
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	2e-25
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	5e-25
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-25
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	8e-23
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	3e-21
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	5e-21
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	9e-21
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	2e-20
2dly_A	121	FYN-related kinase; BRK family kinase, structural	2e-18
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	8e-18
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-07
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	2e-17
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	8e-17
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	9e-17
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	3e-16
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	3e-16
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	2e-15
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	3e-15
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	4e-15
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	2e-14
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	2e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-14
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	8e-14
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	8e-09
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	2e-13
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	3e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-13
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	2e-12
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	2e-12
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	3e-12
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	5e-12
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	6e-12
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	1e-11
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	2e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-09
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	3e-11
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	4e-11
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	5e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-11
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	8e-11
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	9e-11
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	1e-10
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	2e-10
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	6e-10
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	3e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-10
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	3e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-10
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	3e-10
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	5e-10
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	2e-09
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	8e-10
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	1e-09
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	1e-09
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	1e-09
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	2e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-09
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	4e-09
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	7e-09
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	8e-09
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	8e-09
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-08
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	3e-08
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	6e-08
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	6e-06
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	1e-05
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	1e-05
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	3e-05
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	1e-04
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	8e-04

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score =  106 bits (267), Expect = 7e-32
 Identities = 54/79 (68%), Positives = 62/79 (78%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           + +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N
Sbjct: 24  QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDN 83

Query: 72  QLPIISAESALILRNPVAK 90
            LPIISA S L L+ PV +
Sbjct: 84  HLPIISAGSELCLQQPVER 102

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 97.8 bits (244), Expect = 3e-28
 Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           ++ GDFLVRES G PG+YVL+ Y  G ++H ++   + + R +   F ++  L+++H   
Sbjct: 34  KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTT 93

Query: 72  QLPIISAESALILRNPVAK 90
           +   I+ +S ++L NP+ K
Sbjct: 94  KQV-ITKKSGVVLLNPIPK 111

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 91.3 bits (227), Expect = 2e-25
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMF 58
           M R  A++   +R DG FLVR+      ++ ++       KH+ ++  EG+ R T+ + F
Sbjct: 33  MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAF 92

Query: 59  ESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
             ++ LV ++ QN L          L+ P  +
Sbjct: 93  RGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE 124

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 89.3 bits (222), Expect = 5e-25
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 7   TAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLV 65
               +   G FLVR+S+   G+ VLT    G  KHL L ++  G  R +   F+S+  ++
Sbjct: 26  LEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDML 85

Query: 66  NYHCQNQLPIISA-ESALILRNPV 88
            +   + +P+ S   S ++L + V
Sbjct: 86  EHFRVHPIPLESGGSSDVVLVSYV 109

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 89.4 bits (222), Expect = 7e-25
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
              GDFLVRESQ    +YVL+    G  +H ++   + + R +   F S+  L+++    
Sbjct: 33  VHSGDFLVRESQ-GKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLST 91

Query: 72  QLPIISAESALILRNPVAK 90
           Q P ++ +S ++L   V  
Sbjct: 92  QQP-LTKKSGVVLHRAVPS 109

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 83.8 bits (208), Expect = 8e-23
 Identities = 18/76 (23%), Positives = 34/76 (44%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
            +GDFL+R+S+ SP  + ++    G  KH  +   + V     R F ++  LV ++ +  
Sbjct: 26  VEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAP 85

Query: 73  LPIISAESALILRNPV 88
           +        L L   +
Sbjct: 86  IFTSEHGEKLYLVRAL 101

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 80.4 bits (199), Expect = 3e-21
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGS-PGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM- 57
           +SR           DG FLVR++     G Y LT  +GG  K + +   +G     D + 
Sbjct: 18  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLT 77

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAKC 91
           F SV  L+N++    L   + +  + L  PV+K 
Sbjct: 78  FSSVVELINHYRNESLAQYNPKLDVKLLYPVSKY 111

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 79.6 bits (197), Expect = 5e-21
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
             R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH
Sbjct: 24  KQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 83

Query: 69  CQNQLPIISAESALILRNPV 88
               +        L     V
Sbjct: 84  RSTSVSRNQQIF-LRDIEQV 102

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 78.4 bits (194), Expect = 9e-21
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
            R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH
Sbjct: 21 KQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 80

Query: 69 CQNQLPIISAESALILRN 86
                 +S    + LR+
Sbjct: 81 RSTS---VSRNQQIFLRD 95

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 77.7 bits (192), Expect = 2e-20
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 8/92 (8%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMF 58
           +SR  A+T    ++ G FLVR+S   PG YVL+  +     H ++   P    +  D+ F
Sbjct: 26  VSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEF 85

Query: 59  ESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           + +  L+ ++  + L   +      L  P  +
Sbjct: 86  DHLPALLEFYKIHYLDTTT------LIEPAPR 111

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 73.1 bits (180), Expect = 2e-18
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
              Q G FL+RES+   G + L+    G  KH  +  +D  G   T+ ++F +++  VNY
Sbjct: 35  SENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNY 94

Query: 68  HCQNQLPIISAESALILRNPVAK 90
           +      +        L  P  K
Sbjct: 95  YTTTSDGLCVK-----LEKPCLK 112

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 75.6 bits (185), Expect = 8e-18
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQ-GSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM- 57
           +SR           DG FLVR++     G Y LT  +GG  K + +   +G     D + 
Sbjct: 17  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLT 76

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAKC 91
           F SV  L+N++    L   + +  + L  PV+K 
Sbjct: 77  FSSVVELINHYRNESLAQYNPKLDVKLLYPVSKY 110

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 46.7 bits (110), Expect = 1e-07
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE--GVVRTKDRM 57
            +R  A+     ++DG FLVRES    G Y  +    G  KH ++              +
Sbjct: 308 SNRNKAENLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNL 366

Query: 58  FESVSHL 64
           + S+  L
Sbjct: 367 YSSLKEL 373

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 69.9 bits (172), Expect = 2e-17
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 11  SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHC 69
            +  G F++R SQ SPG + ++       +H  ++ D +G        F S++ LV+Y+ 
Sbjct: 27  GKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYR 86

Query: 70  QNQLPIISAESALILRN 86
                 IS +  + LR+
Sbjct: 87  TTS---ISKQKQVFLRD 100

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 68.5 bits (168), Expect = 8e-17
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSHLVNYHCQN 71
            DG FL R S+ +PG + L+  + G   H+ + +            F +++ LV Y+ ++
Sbjct: 28  VDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEH 87

Query: 72  QLPIISAESALI-LRNPVAK 90
              +      +I L+ P+  
Sbjct: 88  HGQLKEKNGDVIELKYPLNC 107

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 69.1 bits (169), Expect = 9e-17
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 8/95 (8%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE--GVVR---TKDRMFESVSHL 64
              +DG FLVRES+  P  Y L+ ++ G  +H  +      GV++   T +  F S+  L
Sbjct: 46  TGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYAL 105

Query: 65  VNYHCQNQLPIISAESALILRNPVAK-CATGAHTG 98
           + ++ +    +  AE  L L +PV     +G  +G
Sbjct: 106 IQHYREA--HLRCAEFELRLTDPVPNPNPSGPSSG 138

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 67.2 bits (164), Expect = 3e-16
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 25/109 (22%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--------------- 44
           +SR  A      ++ G FLVR+S  SPG YVL+  +     H ++               
Sbjct: 7   LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQ 66

Query: 45  ---IDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
                    +R  D+ F+S+  L+ ++  + L   +      L  PV++
Sbjct: 67  PPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTT------LIEPVSR 109

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 68.0 bits (166), Expect = 3e-16
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 13/96 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQ--YVLTGYQGGTKKHLLLIDPE-------GVVRTKDRMFES 60
            S +DG FL+R+S G   +  Y L  +      ++ +   E       G  +  +  F S
Sbjct: 41  RSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGS 100

Query: 61  VSHLVNYHCQNQLPIISAES----ALILRNPVAKCA 92
           V  +VN H  N L +I +++    +  L+  V   +
Sbjct: 101 VVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVSS 136

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 65.0 bits (159), Expect = 2e-15
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMF 58
           M R        S   G +L+RE      ++ ++       KH+ +++ +  +  T+ + F
Sbjct: 23  MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKF 82

Query: 59  ESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           +S+  LV Y+  + L     +    L+ P + 
Sbjct: 83  DSLLELVEYYQCHSLKESFKQLDTTLKYPYSG 114

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 64.6 bits (158), Expect = 3e-15
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 15/91 (16%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK------DRMFESVSH 63
               DG FLVRESQ +P  +VL+       KH L++  E   R           F  +  
Sbjct: 33  QGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQ 92

Query: 64  LVNYHCQNQ--LPIISAESALILRNPVAKCA 92
           LV +H  N+  LP        +LR+   + A
Sbjct: 93  LVEFHQLNRGILPC-------LLRHCCTRVA 116

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 64.6 bits (158), Expect = 4e-15
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYH 68
              Q   FLVR S  +PG Y L        +   +   P        R + S+  +++++
Sbjct: 34  TVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHY 93

Query: 69  CQNQLPIISAESALILRNPVAK 90
            + Q+          L+ PV  
Sbjct: 94  RKEQI-----VEGYYLKEPVPM 110

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 62.6 bits (153), Expect = 2e-14
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 11  SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHC 69
             + G FLVRES   PG Y L     G  +H  ++     +   ++  FE++  LV ++ 
Sbjct: 26  PPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT 85

Query: 70  QNQLPIISAESALILRNPVAK 90
            +   + +      L  P   
Sbjct: 86  SDADGLCTR-----LIKPKVM 101

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 62.7 bits (153), Expect = 2e-14
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKH--LLLIDPEGVVRTKDRMFESVS 62
                G FL+RES+ + G Y L+       +G   KH  +  +D  G   T    FE++ 
Sbjct: 24  FGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQ 83

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
            LV ++ +      +A  +  L  P  K
Sbjct: 84  QLVQHYSER-----AAGLSSRLVVPSHK 106

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.0 bits (159), Expect = 4e-14
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
              GDFLVRESQ    +YVL+    G  +H ++   + + R +   F S+  L+++    
Sbjct: 30  VHSGDFLVRESQ-GKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLST 88

Query: 72  QLPIISAESALILRNPVAK 90
           Q P+   +S ++L   V K
Sbjct: 89  QQPLTK-KSGVVLHRAVPK 106

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 63.4 bits (154), Expect = 8e-14
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 13  QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
           +DG FLVR+    P  Y ++    G  KH  +      V   +  F+S+  L++Y+ ++ 
Sbjct: 143 RDGAFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHP 201

Query: 73  LPIISAESALILRNPVAK 90
           L        + LR P+ +
Sbjct: 202 LYRK-----MKLRYPINE 214

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 49.9 bits (119), Expect = 8e-09
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-----DPEGVVRTKDRMFESVSHL 64
               DG FLVRES+   G Y L+ ++ G  +H  +             T + +F+S+  L
Sbjct: 32  TGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDL 91

Query: 65  VNYHCQNQL 73
           + ++ Q  L
Sbjct: 92  ITHYQQVPL 100

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 59.6 bits (145), Expect = 2e-13
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK------DRMFESVSH 63
               DG FL+R+SQ +P  +VLT       K+  ++  E   +T       +  F  +  
Sbjct: 24  QGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQ 83

Query: 64  LVNYHCQNQLPIISAESALILRNPVAK 90
           LV+++  N+  +        L++   +
Sbjct: 84  LVDFYQLNKGVLPCK-----LKHHCIR 105

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 59.1 bits (144), Expect = 3e-13
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 6/81 (7%)

Query: 11 SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHC 69
            +DG FLVRES   PG YVL    G    H  +L     +   +   F ++  +V ++ 
Sbjct: 23 PPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYS 82

Query: 70 QNQLPIISAESALILRNPVAK 90
          +++  I +      L  P  K
Sbjct: 83 KDKGAICTK-----LVRPKRK 98

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 62.1 bits (151), Expect = 6e-13
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH--LLLIDPEGVVRTKDRM 57
           +SR  A+    S  +G FLVRES+ SPGQ  ++    G   H  +       +  + +  
Sbjct: 112 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 171

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           F +++ LV++H      +I+      L  P  K
Sbjct: 172 FNTLAELVHHHSTVADGLITT-----LHYPAPK 199

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 58.1 bits (141), Expect = 2e-12
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 11/87 (12%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG------VVRTKDRMFESVSH 63
               DG FLVR+SQ +P  +VL+   G   KH  +I  E        +      F  +  
Sbjct: 45  QGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQ 104

Query: 64  LVNYHCQNQLPIISAESALILRNPVAK 90
           LV ++  N+  +        L++  A+
Sbjct: 105 LVEFYQLNKGVLPCK-----LKHYCAR 126

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 59.1 bits (143), Expect = 2e-12
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 16/106 (15%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--------IDPEGVV 51
           M+   AK       +G FL+R+S  S     ++        +L +        +D    V
Sbjct: 24  MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICV 83

Query: 52  RTKDRMFESVSHLVNYHCQNQLPIISAESA-------LILRNPVAK 90
           ++K + F+SV HL++Y+ Q      +   A       L L  P+  
Sbjct: 84  KSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPLYT 129

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 56.9 bits (138), Expect = 3e-12
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEG-VVRTKDRM 57
            +R  A+     ++DG FLVRES    G Y  +    G  KH ++     G        +
Sbjct: 17  SNRNKAENLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNL 75

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           + S+  LV ++    L   +    + L  PV  
Sbjct: 76  YSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 108

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 56.6 bits (137), Expect = 5e-12
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 14/100 (14%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT------GYQGGTKKH--LLLIDPEGVVRTKDRMFESV 61
              ++G F+VR+S    G+Y ++      G   G  +H  +           +  +F ++
Sbjct: 29  QEGKEGGFIVRDSS-KAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTI 87

Query: 62  SHLVNYHCQNQLPIISAESALILRNPVAKCATGAHTGQSL 101
             L+NYH  N   +IS      L+ PV++    A +    
Sbjct: 88  PELINYHQHNSAGLISR-----LKYPVSQQNKNAPSTHHH 122

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 56.7 bits (137), Expect = 6e-12
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 15/105 (14%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG----VVRTKD 55
           ++R  A+    +  DG FLVR+S        L+    G   H  +    G      +   
Sbjct: 31  ITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDV 90

Query: 56  RMFESVSHLVNYHCQN----------QLPIISAESALILRNPVAK 90
               S+  L+ +   +               SA   + L NPV++
Sbjct: 91  EGHTSIVDLIEHSIGDSENGAFCYSRSRLPGSATYPVRLTNPVSR 135

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 55.4 bits (134), Expect = 1e-11
 Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEG------VVRTKDRMFESVS 62
            + +DG FLVR S+     Y L            +L + +             R F  + 
Sbjct: 28  RTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLD 87

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
            L+ ++ +  + +++      L+ PV  
Sbjct: 88  QLIEFYKKENMGLVTH-----LQYPVPL 110

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 54.6 bits (132), Expect = 2e-11
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 14/88 (15%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT------GYQGGTKKH-LLLIDPEG-VVRTKDRMFESV 61
              ++G F+VR S    G Y ++        + GT KH  +  + E  +   ++  F+S+
Sbjct: 29  QKGKEGAFMVRNSS-QVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSI 87

Query: 62  SHLVNYHCQNQLPIISAESALILRNPVA 89
             L++YH  N   +I+      LR+PV+
Sbjct: 88  PKLIHYHQHNSAGMITR-----LRHPVS 110

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 57.3 bits (138), Expect = 3e-11
 Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH--LLLIDPEGVVRTKDRMFESVSHLVNY 67
               DG FL+R+   S G YVL+        H  +             +     + L  +
Sbjct: 27  AGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEF 86

Query: 68  HCQNQLPIISAESALILRNPVAKC 91
           + ++   +        LR P  + 
Sbjct: 87  YSRDPDGLPCN-----LRKPCNRP 105

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 51.1 bits (122), Expect = 4e-09
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH--LLLIDPEGVVRTKDRMFESVSHLVNY 67
            ++ DG FL+R  +   G Y L+   G T  H  +           +   F+++  LV Y
Sbjct: 180 GAQTDGKFLLRPRK-EQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEY 238

Query: 68  HCQNQ 72
                
Sbjct: 239 LKLKA 243

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 54.2 bits (131), Expect = 3e-11
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEG------VVRTKDRMFESVS 62
            +  DG +L+R+S+  PG Y L     G      +     G            R F  + 
Sbjct: 22  ATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIK 81

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
           +L++   +    I+       L+ PV K
Sbjct: 82  NLISAFQKPDQGIVIP-----LQYPVEK 104

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 53.8 bits (130), Expect = 4e-11
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEG------VVRTKDRMFESVS 62
               DG+FL+R+S+  PG   L            +  +  G         T   +F ++ 
Sbjct: 21  KGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQ 80

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
            LV+ + +    ++       L NP+ +
Sbjct: 81  ELVSKYGKPGQGLVVH-----LSNPIMR 103

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 53.3 bits (129), Expect = 5e-11
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDRM-FESVSHLVNY 67
               G FL+R S+     YVL+       +H  +     G +   + + F S+  LVNY
Sbjct: 21 EGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNY 80

Query: 68 HCQNQLPIISAESALILRNPVAK 90
          H    L          L  P  K
Sbjct: 81 HRAQSLSHGLR-----LAAPCRK 98

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 56.4 bits (136), Expect = 5e-11
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKH--LLLIDPEGVVRTKDRMFESVS 62
                G FLVRES+ + G Y L+       +G   KH  +  +D  G   T    F S+ 
Sbjct: 167 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 226

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
            LV Y+ ++   +        L      
Sbjct: 227 QLVAYYSKHADGLCHR-----LTTVCPT 249

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 53.6 bits (129), Expect = 8e-11
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEG------VVRTKDRMFESVS 62
            +  DG +L+R+S+  PG Y L     G      +     G            R F  + 
Sbjct: 22  ATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIK 81

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
           +L++   +    I+       L+ PV K
Sbjct: 82  NLISAFQKPDQGIVIP-----LQYPVEK 104

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 53.0 bits (128), Expect = 9e-11
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 11  SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEG-VVRTKDRMFESVSHLVNYH 68
           S  +G FLVRES+ SPGQ  ++    G   H  +    +G V  T +  F +++ LV++H
Sbjct: 34  SLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHH 93

Query: 69  CQNQLPIISAESALILRNPVAKC 91
                   +      L  P  KC
Sbjct: 94  STV-----ADGLVTTLHYPAPKC 111

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 52.7 bits (127), Expect = 1e-10
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 9   FPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNY 67
               +DG FL+R+ +     Y +T    G  KH  +  D    V      FES+  LV+Y
Sbjct: 36  MRIPRDGAFLIRKRE-GTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSY 94

Query: 68  HCQNQLPIISAESALILRNPVAK 90
           + ++ L          LR PV  
Sbjct: 95  YEKHALYRKMR-----LRYPVTP 112

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 54.5 bits (131), Expect = 2e-10
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDR-MFESVSHLVNY 67
            ++ DG FL+R  +   G Y L+   G T  H L+  D  G     +   F+++  LV Y
Sbjct: 178 GAQTDGKFLLRPRK-EQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEY 236

Query: 68  HCQNQ 72
                
Sbjct: 237 LKLKA 241

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 53.0 bits (127), Expect = 6e-10
 Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDR-MFESVSHLVNY 67
              DG FL+R+   S G YVL+        H  +     G             + L  +
Sbjct: 25 AGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEF 84

Query: 68 HCQNQLPII 76
          + ++   + 
Sbjct: 85 YSRDPDGLP 93

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 54.3 bits (130), Expect = 3e-10
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLL-LIDPEGVVR-TKDRM 57
           ++R  A+     ++DG FL+RES    G Y  +    G  KH +      G        +
Sbjct: 201 INRTQAEEMLSGKRDGTFLIRESS-QRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNL 259

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           + S+  LV ++    L   +    + L +PV  
Sbjct: 260 YGSLKELVLHYQHASLVQHNDALTVTLAHPVRA 292

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 54.4 bits (131), Expect = 3e-10
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKH--LLLIDPEGVVRTKDRMFESVS 62
                G FLVRES+ + G Y L+       +G   KH  +  +D  G   T    F S+ 
Sbjct: 84  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143

Query: 63  HLVNYHCQNQLPIIS 77
            LV Y+ ++   +  
Sbjct: 144 QLVAYYSKHADGLCH 158

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 51.8 bits (125), Expect = 3e-10
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 11 SRQDGDFLVRESQGSPGQYVLTGYQGGTKKH--LLLIDPEGVVRTKDRMFESVSHLVNYH 68
          S  +G FLVRES+ SPGQ  ++    G   H  +       +  + +  F +++ LV++H
Sbjct: 23 SGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH 82

Query: 69 CQNQLPIISAESALILRNPVAK 90
                  +      L  P  K
Sbjct: 83 STV-----ADGLITTLHYPAPK 99

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 54.3 bits (131), Expect = 3e-10
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 11  SRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDRMFESVSHLVNYHC 69
             + G FLVRES   PG Y L     G  +H  ++     +   ++  FE++  LV ++ 
Sbjct: 98  PPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT 157

Query: 70  QNQLPIISAESALILRNPVAK 90
            +   + +      L  P   
Sbjct: 158 TDADGLCTR-----LIKPKVM 173

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 53.9 bits (128), Expect = 3e-10
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 1  MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTG-YQGGTKKHLLLIDPEGVVRTKDRMF 58
          +SR  A+T    ++ G FLVR+S   PG YVL+         +++   P    +  D+ F
Sbjct: 19 VSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEF 78

Query: 59 ESVSHLVNYHCQNQ 72
          + +  L+ ++  + 
Sbjct: 79 DHLPALLEFYKIHY 92

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 53.4 bits (128), Expect = 5e-10
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVR-TKDRMFESVSHLVNY 67
              DG +L+R+S+   G + L+   G    H  +  +  G       R   S + L +Y
Sbjct: 24 GGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHY 83

Query: 68 HCQN 71
          H Q 
Sbjct: 84 HSQE 87

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 51.8 bits (124), Expect = 2e-09
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDRM-FESVSHLVNY 67
            S+ +G FL+R    + G Y L     G   H  +  D  G +   +   F+++  LV +
Sbjct: 177 GSKTNGKFLIRARD-NNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEH 235

Query: 68  HCQNQLPIISAESALILRNPVAK 90
           +      ++       L  P  K
Sbjct: 236 YSYKADGLLRV-----LTVPCQK 253

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 50.4 bits (121), Expect = 8e-10
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKH-LLLIDPEGVVRTKDRM-FESVS 62
          P    G FL+RES+ + G + L+       QG   KH  +     G      R+ F  + 
Sbjct: 23 PGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLH 82

Query: 63 HLVNYHCQNQ 72
           LV ++    
Sbjct: 83 ELVRHYTNAS 92

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 50.4 bits (121), Expect = 1e-09
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEG--VVRTKDRMFESVSHLVN 66
            S+  G FL+R S    G Y L+     +  H ++ +  +G  ++  +     S+  LV 
Sbjct: 33  ESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVT 91

Query: 67  YHCQNQLPIISAESALILRNPVAK 90
           +H Q  +         +L  P  +
Sbjct: 92  FHQQKPIEPRR----ELLTQPCRQ 111

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 50.7 bits (121), Expect = 1e-09
 Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 20/93 (21%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLT---------------GYQGGTKKHLLL 44
           +SR  A      +  G FL+R+S    G Y L                       +H L+
Sbjct: 27  LSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLI 86

Query: 45  IDPEGVVR----TKDRMFESVSHLVNYHCQNQL 73
                 V+      +  F S+S LV+ H  + +
Sbjct: 87  ETGPKGVKIKGCPSEPYFGSLSALVSQHSISPI 119

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 51.1 bits (122), Expect = 1e-09
 Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 9/80 (11%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL--------LLIDPEGVV 51
           ++   A     +   G FL+R+S      + L+       K+L          +  +   
Sbjct: 30  VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRS 89

Query: 52  RTKDRMFESVSHLVNYHCQN 71
                 F+ V  LV+++   
Sbjct: 90  TQPVPRFDCVLKLVHHYMPP 109

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 50.0 bits (120), Expect = 2e-09
 Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 11/89 (12%)

Query: 10  PSRQDGDFLVRESQGSPGQYVL----TGYQGGTKKH-LLLIDPEGVVRTKDR-MFESVSH 63
           P  + G FL+RES+ + G + L       QG   KH  +     G      R  F ++  
Sbjct: 31  PMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQA 90

Query: 64  LVNYHCQNQLPIISAESALILRNPVAKCA 92
           LV ++ +    +        L  P    A
Sbjct: 91  LVQHYSKKGDGLCQK-----LTLPCVNLA 114

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 51.6 bits (124), Expect = 3e-09
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKH--LLLIDPEGVVRTKDRMFESVS 62
           P    G F++R+S+ + G Y L+       QG T KH  +  +D  G   +    F ++ 
Sbjct: 89  PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ 148

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
            LV+++ +    +        L  P   
Sbjct: 149 ELVDHYKKGNDGLCQ-----KLSVPCMS 171

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 50.3 bits (120), Expect = 4e-09
 Identities = 9/88 (10%), Positives = 27/88 (30%), Gaps = 8/88 (9%)

Query: 11  SRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG-----VVRTKDRMFESVSHLV 65
            + +G FL+R+S      + ++  +     H  +                     ++ L+
Sbjct: 52  GKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLL 111

Query: 66  NYHCQNQLPIISAESALILRNPVAKCAT 93
            ++      +       +L  P+ +   
Sbjct: 112 EHYKDPSACMF---FEPLLSTPLIRTFP 136

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 50.3 bits (119), Expect = 7e-09
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 19/91 (20%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-------------- 45
           +SR  A      ++ G FLVR+S  SPG YVL+  +     H ++               
Sbjct: 20  LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQ 79

Query: 46  ----DPEGVVRTKDRMFESVSHLVNYHCQNQ 72
                    +R  D+ F+S+  L+ ++  + 
Sbjct: 80  PPPGVSPSRLRIGDQEFDSLPALLEFYKIHY 110

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 48.1 bits (115), Expect = 8e-09
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 11/72 (15%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLT------GYQGGTKKH----LLLIDPEGVVRTKDRMFE 59
           + ++G F+VR+S+ +PG Y ++        +    KH         P+     +  +F+
Sbjct: 27 DTGKEGAFMVRDSR-TPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFD 85

Query: 60 SVSHLVNYHCQN 71
          S+  L+ YH  N
Sbjct: 86 SIPLLIQYHQYN 97

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 48.8 bits (116), Expect = 8e-09
 Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 9/96 (9%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH--------LLLIDPEGVV 51
           ++   A     +   G FL+R+S      + L+       K+           +  +   
Sbjct: 41  VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRS 100

Query: 52  RTKDRMFESVSHLVNYHCQNQLPIISAESALILRNP 87
                 F+ V  LV+++   Q    S          
Sbjct: 101 TQPVPRFDXVLKLVHHYMPPQALPGSTPKRAYYIYS 136

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDRMFESVSHLVNYH 68
             R DG FL+RES+ +PG + L+   G   +H  +L D  G        F S++ LV+YH
Sbjct: 76  KQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 135

Query: 69  CQNQL 73
               +
Sbjct: 136 RSTSV 140

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 46.9 bits (112), Expect = 3e-08
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (15%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT------GYQGGTKKH-LLLIDPEG-VVRTKDRMFESV 61
              ++G F+VR+S+   G Y ++             KH  +  +  G     +   F+S+
Sbjct: 34  QESKEGAFIVRDSR-HLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSI 92

Query: 62  SHLVNYHCQNQLPIISAESALILRNPVAK 90
             L+ YH  N   +++      LR PV  
Sbjct: 93  PELIWYHQHNAAGLMTR-----LRYPVGL 116

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 45.9 bits (108), Expect = 6e-08
 Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 5   AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTK-KHLLLIDPEGVVR-TKDRMFESVS 62
           A +     QDG + +R S    G+ ++   +   K ++  + + +       + +F SV 
Sbjct: 35  ATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLFVSVG 94

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAKCATGA 95
            +V ++  + LP   +  +L+LR+P    +  +
Sbjct: 95  SMVEHYHTHVLP---SHQSLLLRHPYGYTSGPS 124

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 41.9 bits (97), Expect = 6e-06
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 19/93 (20%)

Query: 1   MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLT------------------GYQGGTKKH 41
           +SR  A      ++ G FLVR+S  SPG YVL+                       +   
Sbjct: 18  LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQ 77

Query: 42  LLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
                    +R  D+ F+S+  L+ ++  + L 
Sbjct: 78  PPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLD 110

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A Length = 463

 Score = 41.0 bits (96), Expect = 1e-05
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 1   MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFE 59
           +SR A        +G +L+RESQ  PG Y L    G   ++  L  D +  V   ++ FE
Sbjct: 58  ISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVG--EKRFE 115

Query: 60  SVSHLV 65
           S+  LV
Sbjct: 116 SIHDLV 121

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGY-----QGGTKKHLLLI-DPEGVVR-TKDRMFESVS 62
           P    G FL+RES+ + G + L+       QG   KH  +     G    +    F  + 
Sbjct: 93  PGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLH 152

Query: 63  HLVNYHCQN 71
            LV ++   
Sbjct: 153 ELVRHYTNA 161

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 39.0 bits (91), Expect = 3e-05
 Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 7/68 (10%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLT---GYQGGTKKH-LLLIDPEGVV--RTKDRMFESVSH 63
           +   G+ ++R        Y +T          KH  ++   +       K     ++  
Sbjct: 33 KNPSLGNMILRPGS-DSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFS 91

Query: 64 LVNYHCQN 71
          +++Y  + 
Sbjct: 92 VIDYFVKE 99

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 12/76 (15%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLT---GYQGGTKKHLLLIDPE--------GVVRTKDRMF 58
           P    G FL+R+S   PG+Y LT     +G    H L+   E          V+  ++ F
Sbjct: 60  PQVSIGTFLMRDSS-RPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSF 118

Query: 59  ESVSHLVNYHCQNQLP 74
             +  L+N+     L 
Sbjct: 119 PDIPALLNHFKMRVLT 134

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 36.0 bits (83), Expect = 8e-04
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQN 71
            G FL R S+ + G + L+   G    H+ +    +         F +++ LV Y+ Q 
Sbjct: 23 VHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQ 82

Query: 72 Q 72
          Q
Sbjct: 83 Q 83

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.96
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.95
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.94
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.94
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.94
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.93
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.93
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.93
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.93
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.93
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.93
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.93
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.93
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.93
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.93
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.93
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.93
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.93
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.93
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.93
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.93
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.92
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.92
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.92
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.92
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.92
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.92
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.92
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.92
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.92
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.92
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.92
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.91
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.91
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.91
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.91
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.91
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.9
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.9
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.9
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.9
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.9
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.89
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.88
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.88
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.88
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.88
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.88
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.88
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.88
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.87
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.87
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.87
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.87
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.87
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.86
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.86
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.86
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.86
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.84
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.84
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.83
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.83
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.83
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.71
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.82
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.81
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.8
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.8
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.79
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.78
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.77
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.74
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.72
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.71
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.67
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.66
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.66
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.63
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.62
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.58
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.54
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.48
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	98.74
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	98.28
1uur_A	473	Stata protein, STAT protein; transcription activat	98.19
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	97.97
1yvl_A	683	Signal transducer and activator of transcription 1	97.36
1y1u_A	585	Signal transducer and activator of transcription;	97.28
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	97.12
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	96.82
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	96.77
1bf5_A	575	Signal transducer and activator of transcription 1	96.6
3op0_A	323	Signal transduction protein CBL-C; structural geno	96.47
2w0p_A	94	Filamin-A; alternative splicing, cytoskeleton/comp	89.72
2di8_A	111	Filamin-B; beta-sandwich, immunoglobulin-like fold	88.92
2bp3_A	97	Filamin A; structural protein, cytoskeleton/comple	88.77
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	88.77
3rgh_A	100	Filamin-A; cell adhesion, cytoskeleton-complex, di	87.87
2dic_A	105	Filamin-B; beta-sandwich, immunoglobulin-like fold	87.58
2eea_A	115	Filamin-B; beta-sandwich, immunoglobulin-like fold	87.29
1v05_A	96	Filamin C; actin-binding protein, immunoglobulin;	87.16
2dia_A	113	Filamin-B; beta-sandwich, immunoglobulin-like fold	86.86
2k9u_A	119	Gamma filamin; cytoskeletal complex, alternative s	86.78
3cnk_A	89	Filamin-A; FLNA24, X-RAY crystalography, homodimer	86.44
2dmb_A	124	Filamin-B; beta-sandwich, immunoglobulin-like fold	85.95
2ds4_A	113	Tripartite motif protein 45; beta-sandwich, immuno	85.59
2di7_A	124	BK158_1; beta-sandwich, immunoglobulin-like fold,	84.32
2di9_A	131	Filamin-B; beta-sandwich, immunoglobulin-like fold	84.09
2ee6_A	105	Filamin-B; beta-sandwich, immunoglobulin-like fold	83.98
2dj4_A	108	Filamin-B; beta-sandwich, immunoglobulin-like fold	83.3
2d7o_A	111	Filamin-C; beta-sandwich, immunoglobulin-like fold	82.7
2d7m_A	115	Filamin-C; beta-sandwich, immunoglobulin-like fold	82.68
2e9j_A	119	Filamin-B; beta-sandwich, immunoglobulin-like fold	82.09

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.96  E-value=9.7e-29  Score=146.75  Aligned_cols=91  Identities=62%  Similarity=0.924  Sum_probs=81.6

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCccccCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAES   80 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~   80 (101)
                      |+|++| +.||.++|+||||+|++.+|.|+||++.++.++||+|...+|.|.+++..|+||.+||+||+.+++|+.+.+.
T Consensus        14 isR~~A-e~lL~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LI~~y~~~~~p~~~~g~   92 (104)
T 1mil_A           14 LSRREA-EALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGS   92 (104)
T ss_dssp             CCHHHH-HTTCCSTTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHHTCCEEETTE
T ss_pred             CCHHHH-HHHhccCCcEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCEEEECCceeCCHHHHHHHHhhCCCccccCCc
Confidence            789995 5555689999999999989999999999999999999877788989889999999999999999998866677


Q ss_pred             ceEEcCccccCC
Q psy8455          81 ALILRNPVAKCA   92 (101)
Q Consensus        81 ~~~L~~Pv~~~~   92 (101)
                      .+.|+.||+|++
T Consensus        93 ~~~L~~Pv~r~~  104 (104)
T 1mil_A           93 ELCLQQPVERKL  104 (104)
T ss_dssp             EECCCEECCCCC
T ss_pred             eEEeCccCCCCC
Confidence            889999999864

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.95  E-value=6.1e-28  Score=145.86  Aligned_cols=90  Identities=32%  Similarity=0.616  Sum_probs=80.2

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCccccCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAES   80 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~   80 (101)
                      |+|++| |.||+++|+||||+|++.+|.|+||++.++.++||+|...+|.|.+++..|+||.+||+||+.+++++ +.+.
T Consensus        24 isR~eA-e~lL~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~y~~~~~~F~sl~eLV~~y~~~~~~i-~~~~  101 (116)
T 2kk6_A           24 IPRIEA-QELLKKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTTKQVI-TKKS  101 (116)
T ss_dssp             CCHHHH-HHTCCSTTCEEEEECTTCTTCEEEEEEETTEEEEEEEEEETTEEESSSCEESCHHHHHHHHHHTTCCS-CTTT
T ss_pred             CCHHHH-HHHhccCCcEEEEECCCCCCcEEEEEEECCeEEEEEEEecCCEEEECCCEeCCHHHHHHHHhhCCCCc-cCCC
Confidence            789995 55556899999999999899999999999999999998667889998899999999999999999987 4457


Q ss_pred             ceEEcCccccCC
Q psy8455          81 ALILRNPVAKCA   92 (101)
Q Consensus        81 ~~~L~~Pv~~~~   92 (101)
                      .+.|+.||+|++
T Consensus       102 ~~~L~~Pv~r~~  113 (116)
T 2kk6_A          102 GVVLLNPIPKDK  113 (116)
T ss_dssp             TCCCCSCCCCCC
T ss_pred             CCeECcccCCCC
Confidence            789999999873

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.94  E-value=7.7e-27  Score=140.62  Aligned_cols=90  Identities=29%  Similarity=0.462  Sum_probs=79.1

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCccccCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAES   80 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~   80 (101)
                      |+|++| |.||.++|+||||+|++.+ .|+||++.++.++||+|...+|.|.+++..|+||.+||+||+.+.+++ +...
T Consensus        23 isR~eA-e~lL~~~G~FLVR~S~~~~-~y~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LV~~y~~~~~~~-~~~~   99 (114)
T 1wqu_A           23 IPRAEV-AELLVHSGDFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPL-TKKS   99 (114)
T ss_dssp             CCHHHH-HTTCCSTTEEEEEECSSSC-CEEEEEEETTEEEEEECEECSSSEESSSCCBSSHHHHHHHHHHHCCCS-CTTT
T ss_pred             CCHHHH-HHHhccCCeEEEEEcCCCC-CEEEEEEECCEEEEEEEEecCCEEEECCCCCCCHHHHHHHHHHCCCCc-CCCC
Confidence            789995 5566689999999999877 899999999999999998667889999999999999999999998887 4457


Q ss_pred             ceEEcCccccCCC
Q psy8455          81 ALILRNPVAKCAT   93 (101)
Q Consensus        81 ~~~L~~Pv~~~~~   93 (101)
                      .+.|..||++++.
T Consensus       100 ~~~L~~Pv~r~~~  112 (114)
T 1wqu_A          100 GVVLHRAVPSGPS  112 (114)
T ss_dssp             CCCCCEECCSCTT
T ss_pred             CcEECcccCCCCC
Confidence            7899999998653

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.94  E-value=1.9e-26  Score=139.61  Aligned_cols=93  Identities=17%  Similarity=0.301  Sum_probs=79.6

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. ..+|+||||+|++.+|.|+||++.++.++||+|...+|.|.+. ...|+||.+||+||+.+++...+.
T Consensus        23 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV~~y~~~~l~~~~~  102 (118)
T 2dlz_A           23 MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFK  102 (118)
T ss_dssp             CCHHHHHHHHHHSCTTBEEEECCSCSSCCEEEEEECSSSEEEEEEEEETTEEESTTSCCBSSHHHHHHHHTTSCTTTTCT
T ss_pred             CCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCcEEEEEEEEcCCEEEEeCCcccCCHHHHHHHHhhCcccccCC
Confidence            78999666555 4699999999998889999999999999999997557778876 489999999999999998866444


Q ss_pred             CcceEEcCccccCCC
Q psy8455          79 ESALILRNPVAKCAT   93 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~~   93 (101)
                      +..+.|+.||+++.+
T Consensus       103 gl~~~L~~Pv~~p~~  117 (118)
T 2dlz_A          103 QLDTTLKYPYSGPSS  117 (118)
T ss_dssp             TCCCCCCBCCSCCCC
T ss_pred             CcccEeCCcCCCCCC
Confidence            566899999998765

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.94  E-value=2.1e-26  Score=142.78  Aligned_cols=95  Identities=23%  Similarity=0.359  Sum_probs=80.5

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+|||+.++.++||+|+..+|.|.++ ...|+||.+||+||+.++++..+.
T Consensus        33 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~eLV~~y~~~~l~~~~~  112 (138)
T 2crh_A           33 MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFK  112 (138)
T ss_dssp             CCHHHHHHHTTTSCTTEEEEECCSSTTCCCEEEEEETTEEEEEECEEETTEEESSTTCCBSSHHHHHHHHTTSCGGGTCT
T ss_pred             CCHHHHHHHhcCCCCCEEEEEECCCCCCCEEEEEEECCeEEEEEEEeCCCEEEECCCCccCCHHHHHHHHHhCccccccC
Confidence            78999666554 3599999999998889999999999999999998667888886 589999999999999998765444


Q ss_pred             CcceEEcCccccCCCCC
Q psy8455          79 ESALILRNPVAKCATGA   95 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~~~~   95 (101)
                      +..+.|+.||+++....
T Consensus       113 ~l~~~L~~Pv~~~~~~~  129 (138)
T 2crh_A          113 SLDTTLQFPFKEPEKRT  129 (138)
T ss_dssp             TCCCCCCEESSCCCCCC
T ss_pred             CcCcccCCccCCCCCCC
Confidence            56789999999876543

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.94  E-value=2.5e-26  Score=139.42  Aligned_cols=96  Identities=27%  Similarity=0.352  Sum_probs=79.5

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCC-CCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGS-PGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~-~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. .++|+||||+|++. +|.|+||++.++.++||+|...+|.|.+. ...|+||.+||+||+.++++..+
T Consensus        18 isR~eAe~lL~~~~~G~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI~~y~~~~~~~~~   97 (120)
T 2iug_A           18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYN   97 (120)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSGGGCSEEEEEEETTEEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCGGGTC
T ss_pred             CCHHHHHHHhcCCCCcEEEEECCCCCCCCcEEEEEEECCEEEEEEEEEcCCEEEECCCCccCCHHHHHHHHHhCcccccc
Confidence            78999666554 35999999999987 89999999999999999997557778775 58999999999999999987644


Q ss_pred             cCcceEEcCccccCCCCCC
Q psy8455          78 AESALILRNPVAKCATGAH   96 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~~~   96 (101)
                      .+..+.|..||+++.+...
T Consensus        98 ~~l~~~L~~Pv~r~~~~~~  116 (120)
T 2iug_A           98 PKLDVKLLYPVSKYQQDQV  116 (120)
T ss_dssp             GGGCCCCCEECCTTTC---
T ss_pred             CCcceeeCCcCCcCccccc
Confidence            4567899999998876543

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.93  E-value=8.5e-26  Score=132.59  Aligned_cols=85  Identities=27%  Similarity=0.352  Sum_probs=73.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...+|.|.++ ...|+||.+||+||+.++.++   
T Consensus        12 isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~~~~~~l---   88 (98)
T 3us4_A           12 ISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAI---   88 (98)
T ss_dssp             CCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEETTEEESSSSSEESSHHHHHHHHHHCCTTS---
T ss_pred             CCHHHHHHHccCCCCcEEEEEeCCCCCCcEEEEEEECCceEEEEEEEeCCEEEECCCCccCCHHHHHHHhhhCCCCC---
Confidence            78999666554 3699999999999899999999999999999997556777776 489999999999999998655   


Q ss_pred             CcceEEcCcccc
Q psy8455          79 ESALILRNPVAK   90 (101)
Q Consensus        79 ~~~~~L~~Pv~~   90 (101)
                        .+.|..||+|
T Consensus        89 --~~~L~~P~pk   98 (98)
T 3us4_A           89 --CTKLVRPKRK   98 (98)
T ss_dssp             --SSCCCSBCCC
T ss_pred             --eEcCCccCCC
Confidence              4789999975

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.93  E-value=5.9e-26  Score=135.61  Aligned_cols=92  Identities=18%  Similarity=0.368  Sum_probs=76.1

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++.++.++||+|...++.|.+ +...|+||.+||+||+.+++++..
T Consensus        14 isr~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~l~~   93 (109)
T 3tkz_A           14 ITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKE   93 (109)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHHSTTSEEE
T ss_pred             CCHHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEeCCCEEEecCCcccCCHHHHHHHHHhCcCcccc
Confidence            799997666654  59999999999889999999999999999999766677766 468999999999999999987742


Q ss_pred             -cCcceEEcCccccCC
Q psy8455          78 -AESALILRNPVAKCA   92 (101)
Q Consensus        78 -~~~~~~L~~Pv~~~~   92 (101)
                       .+..+.|+.||++++
T Consensus        94 ~~gl~~~L~~Pv~~~d  109 (109)
T 3tkz_A           94 KNGDVIELKYPLNCAD  109 (109)
T ss_dssp             TTSCBCCCCEECC---
T ss_pred             CCCceEECCCcccCCC
Confidence             355678999998764

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.93  E-value=5.5e-26  Score=136.43  Aligned_cols=92  Identities=24%  Similarity=0.280  Sum_probs=74.8

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. .++|+||||+| +.+|.|+|||+.++.++||+|. ..+|+|..+ ...|+||.+||+||+.++++...
T Consensus        17 isR~~Ae~lL~~~~~G~FLVR~S-~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~l~~~~   95 (112)
T 1h9o_A           17 SNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHN   95 (112)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEEC-SSTTCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSCGGGTC
T ss_pred             CCHHHHHHHhcCCCCceEEEeec-CCCCCEEEEEEECCEEEEEEEEEcCCceEEeCCCCCcCCHHHHHHHHhhCcccccC
Confidence            79999766655 57999999999 7789999999999999999996 445555544 37999999999999999887644


Q ss_pred             cCcceEEcCccccCCC
Q psy8455          78 AESALILRNPVAKCAT   93 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~   93 (101)
                      .+..+.|+.||+++.+
T Consensus        96 ~gl~~~L~~P~~~~~p  111 (112)
T 1h9o_A           96 DSLNVTLAYPVYAQQR  111 (112)
T ss_dssp             TTCCCCCCEETTC---
T ss_pred             CCcCeeCCCCcCCCCC
Confidence            5667899999998754

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.93  E-value=7.2e-26  Score=134.22  Aligned_cols=85  Identities=25%  Similarity=0.375  Sum_probs=73.8

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC------CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK------DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~------~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|.+  ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.++      ...|+||.+||+||+.+
T Consensus        11 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~   90 (104)
T 1d4t_A           11 ISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKP   90 (104)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSS
T ss_pred             CCHHHHHHHHHhcCCCCEEEEeeCCCCCCCEEEEEEECCeEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhC
Confidence            789996665542  799999999998899999999999999999997 667888886      47999999999999999


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|..||+|
T Consensus        91 ~~~l-----~~~L~~P~~r  104 (104)
T 1d4t_A           91 DQGI-----VIPLQYPVEK  104 (104)
T ss_dssp             SSSS-----SSCCCEECCC
T ss_pred             CCCC-----eEECCCcCCC
Confidence            8755     3789999975

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=134.23  Aligned_cols=84  Identities=25%  Similarity=0.418  Sum_probs=73.8

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.++++    
T Consensus        26 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~----  101 (111)
T 2eo3_A           26 VSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLD----  101 (111)
T ss_dssp             CCHHHHHHHHSSCCTTCEEEEECSSSSSCEEEEEEETTEEEEEEEEEETTTEEEETTCCBSSHHHHHHHHTTSCSS----
T ss_pred             CCHHHHHHHhcCCCCceEEEEeecCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCCCC----
Confidence            78999666554 3799999999999899999999999999999997 46788888889999999999999998864    


Q ss_pred             CcceEEcCcccc
Q psy8455          79 ESALILRNPVAK   90 (101)
Q Consensus        79 ~~~~~L~~Pv~~   90 (101)
                        .+.|+.||+|
T Consensus       102 --~~~L~~Pv~r  111 (111)
T 2eo3_A          102 --TTTLIEPAPR  111 (111)
T ss_dssp             --SSCCCCBCCC
T ss_pred             --CccCCCcCcC
Confidence              3689999985

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.93  E-value=6.6e-26  Score=133.58  Aligned_cols=86  Identities=28%  Similarity=0.375  Sum_probs=74.4

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|..   ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.++ ...|+||.+||+||+.+++++
T Consensus         9 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l   88 (100)
T 1rja_A            9 ISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSH   88 (100)
T ss_dssp             CCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCCTTS
T ss_pred             CCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHHHHHhhCCCCC
Confidence            799997766664   599999999999889999999999999999997 456766665 589999999999999998865


Q ss_pred             cccCcceEEcCccccC
Q psy8455          76 ISAESALILRNPVAKC   91 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~   91 (101)
                           .+.|+.||+++
T Consensus        89 -----~~~L~~p~~~~   99 (100)
T 1rja_A           89 -----GLRLAAPCRKH   99 (100)
T ss_dssp             -----SSCCCSBCCCC
T ss_pred             -----CCCCCccCCCC
Confidence                 47899999875

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.93  E-value=4e-26  Score=135.00  Aligned_cols=89  Identities=21%  Similarity=0.313  Sum_probs=76.6

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|.  .++|+||||+|++.+|.|+||++.++.++||+|...+|.|.+++..|+||.+||+||+.+++.....
T Consensus        12 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~~~~   91 (102)
T 2cia_A           12 VTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPIFTSEH   91 (102)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEECCSSSCEEEEEEEETTEEEETTEEESSHHHHHHHHHHSCSEECTT
T ss_pred             CCHHHHHHHHhhCCCCcEEEEEECCCCCCCEEEEEEeCCeeEEEEEEecCCEEEECCcCcCCHHHHHHHHhhCccccCCC
Confidence            78999766554  3799999999999899999999999999999998667889998899999999999999988754224


Q ss_pred             CcceEEcCccc
Q psy8455          79 ESALILRNPVA   89 (101)
Q Consensus        79 ~~~~~L~~Pv~   89 (101)
                      +..+.|++|++
T Consensus        92 ~~~~~L~~Pip  102 (102)
T 2cia_A           92 GEKLYLVRALQ  102 (102)
T ss_dssp             SCEECCCEECC
T ss_pred             CceEEeCCCCC
Confidence            56788999985

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.93  E-value=1.7e-25  Score=135.97  Aligned_cols=89  Identities=25%  Similarity=0.368  Sum_probs=75.6

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|++   .+|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+. ...|+||.+||+||+.+++++
T Consensus        23 isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l  102 (121)
T 2dly_A           23 IKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTTSDGL  102 (121)
T ss_dssp             CCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEETTEEESSHHHHHHHHTTCCSSS
T ss_pred             CCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEECCCCccCCHHHHHHHHhhCCCCC
Confidence            799997776663   589999999998899999999999999999996 456666654 689999999999999998766


Q ss_pred             cccCcceEEcCccccCCCC
Q psy8455          76 ISAESALILRNPVAKCATG   94 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~~~   94 (101)
                           .+.|+.||.++.++
T Consensus       103 -----~~~L~~P~~~~~~~  116 (121)
T 2dly_A          103 -----CVKLEKPCLKIQVS  116 (121)
T ss_dssp             -----SSCCCSBCCCCCSS
T ss_pred             -----ceeCCeecCCCCCC
Confidence                 37899999986543

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.93  E-value=1e-25  Score=134.02  Aligned_cols=88  Identities=24%  Similarity=0.314  Sum_probs=74.6

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...+|.|.++ +..|+||.+||+||+.++.++   
T Consensus        15 isr~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv~~y~~~~~gl---   91 (106)
T 3eaz_A           15 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDADGL---   91 (106)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECTTSTTCEEEEEEETTEEEEEECEEETTEEESSSSSCBSSHHHHHHHHHHCCTTS---
T ss_pred             CCHHHHHHHhCCCCCCEEEEEECCCCCCcEEEEEEeCCceEEEEEEecCCEEEECCCCccCCHHHHHHHHhhCCCCC---
Confidence            78999665554 3799999999998899999999999999999997557888887 479999999999999998655   


Q ss_pred             CcceEEcCccccCCC
Q psy8455          79 ESALILRNPVAKCAT   93 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~~   93 (101)
                        .+.|..||++..+
T Consensus        92 --~~~L~~P~~~~~~  104 (106)
T 3eaz_A           92 --CTRLIKPKVMEGT  104 (106)
T ss_dssp             --SSCCCEECCCC--
T ss_pred             --CeecCCcCCCCCC
Confidence              4789999988654

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.93  E-value=1.8e-25  Score=134.03  Aligned_cols=93  Identities=28%  Similarity=0.355  Sum_probs=73.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+. +..|+||.+||+||+.+..++  
T Consensus        12 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l--   89 (112)
T 3k2m_A           12 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGL--   89 (112)
T ss_dssp             CCHHHHHHHTTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHHHHHHHCCTTS--
T ss_pred             CCHHHHHHHhccCCCceEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHHHHHhhCCCCC--
Confidence            78999665443 3599999999998899999999999999999996 567777664 589999999999999987655  


Q ss_pred             cCcceEEcCccccCCCCCCCC
Q psy8455          78 AESALILRNPVAKCATGAHTG   98 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~~~~~   98 (101)
                         .+.|..||++...+...+
T Consensus        90 ---~~~L~~P~~~~~~p~~~~  107 (112)
T 3k2m_A           90 ---ITTLHYPAPKRNKPTVYG  107 (112)
T ss_dssp             ---SSCCCEECCCC-------
T ss_pred             ---ccCCCCCCCCCCCCCCCC
Confidence               478999999866554433

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.93  E-value=8.5e-26  Score=135.43  Aligned_cols=89  Identities=29%  Similarity=0.413  Sum_probs=74.6

Q ss_pred             CChHHHHhcccC----CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR----QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~----~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|..    ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.+++++
T Consensus        16 isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~   95 (111)
T 2hdv_A           16 LSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPIPL   95 (111)
T ss_dssp             CCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEETTEEEEEEEEECTTCCEEETTEEESSHHHHHHHHTTSCCC-
T ss_pred             CCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEeCCceeCCHHHHHHHHhhCCccc
Confidence            799997666653    799999999999899999999999999999996 567888888899999999999999999998


Q ss_pred             cccC-cceEEcCccc
Q psy8455          76 ISAE-SALILRNPVA   89 (101)
Q Consensus        76 ~~~~-~~~~L~~Pv~   89 (101)
                      .+.+ ..+.|+.||+
T Consensus        96 ~~~~~~~v~L~~~v~  110 (111)
T 2hdv_A           96 ESGGSSDVVLVSYVP  110 (111)
T ss_dssp             ------CCCCCEECC
T ss_pred             ccCCccceEcccccc
Confidence            6544 5788988875

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.93  E-value=1.1e-25  Score=136.10  Aligned_cols=94  Identities=26%  Similarity=0.414  Sum_probs=76.8

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.+++.   
T Consensus        13 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~eLV~~y~~~~l~---   89 (117)
T 3ov1_A           13 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS---   89 (117)
T ss_dssp             CCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTTSCSC---
T ss_pred             CCHHHHHHHHhCCCCCCcEEEEeCCCCCCCEEEEEecCCceEEEEEEECCCCeEEECCCCcCCHHHHHHHHhhCCCC---
Confidence            799997665554  489999999999899999999999999999996 56788888889999999999999999863   


Q ss_pred             cCcceEEcCccccCCCCCCC
Q psy8455          78 AESALILRNPVAKCATGAHT   97 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~~~~   97 (101)
                      ......|+.|++.+.+....
T Consensus        90 ~~~~~~L~~~~~~P~~~~~~  109 (117)
T 3ov1_A           90 RNQQIFLRDIEQVPQQPTYV  109 (117)
T ss_dssp             SSSCCCCBCCCCCC------
T ss_pred             CCCceEecCCCcCCCCCccc
Confidence            35678899999887665443

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.93  E-value=2.3e-25  Score=132.17  Aligned_cols=85  Identities=22%  Similarity=0.271  Sum_probs=72.7

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+.   ++|+||||+|++.+|.|+||++.     ++.++||+|. ..+|.|.+. ...|+||.+||+||+.
T Consensus        11 isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LI~~y~~   90 (105)
T 1lkk_A           11 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTN   90 (105)
T ss_dssp             CCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCHHHHHHHHhh
Confidence            799997777763   69999999999889999999998     6889999997 456767775 5899999999999999


Q ss_pred             CCcCccccCcceEEcCcccc
Q psy8455          71 NQLPIISAESALILRNPVAK   90 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      ++.++.     +.|..||++
T Consensus        91 ~~~~l~-----~~L~~P~~~  105 (105)
T 1lkk_A           91 ASDGLC-----TRLSRPCQT  105 (105)
T ss_dssp             CCTTSS-----SCCCSBCCC
T ss_pred             CCCCCc-----cCCcCcCCC
Confidence            987663     789999974

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.93  E-value=1.9e-25  Score=133.52  Aligned_cols=84  Identities=30%  Similarity=0.483  Sum_probs=71.6

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCC------------------CeEEeCCcccCCH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE------------------GVVRTKDRMFESV   61 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~------------------~~~~~~~~~F~sl   61 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...+                  +.|.+++..|+||
T Consensus         7 isr~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l~~~~F~sl   86 (109)
T 1ju5_A            7 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSL   86 (109)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSSTTEEEEEEECSSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEEETTEEESSH
T ss_pred             CCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcccccccccccccccccEEEeCCcccCCH
Confidence            79999766554 3599999999999899999999999999999997322                  4688888999999


Q ss_pred             HHHHHHHhhCCcCccccCcceEEcCcccc
Q psy8455          62 SHLVNYHCQNQLPIISAESALILRNPVAK   90 (101)
Q Consensus        62 ~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      .+||+||+.++++.      +.|+.||+|
T Consensus        87 ~~LV~~y~~~~l~~------~~L~~Pv~r  109 (109)
T 1ju5_A           87 PALLEFYKIHYLDT------TTLIEPVSR  109 (109)
T ss_dssp             HHHHHHHHHSCSSS------SCCCEESCC
T ss_pred             HHHHHHHhhCCCCC------eecCccCCC
Confidence            99999999987643      479999986

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.93  E-value=1.5e-25  Score=136.43  Aligned_cols=91  Identities=18%  Similarity=0.300  Sum_probs=77.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...++.|.+. ...|+||.+||+||+.+++.....
T Consensus        29 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV~~y~~~~l~~~~~  108 (122)
T 2lnw_A           29 MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFK  108 (122)
T ss_dssp             CCHHHHHHHHHHSCTTBEEEEECCCSSEEEEEEEECSSCEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCGGGTCT
T ss_pred             CCHHHHHHHhcCCCCCeEEEEeCCCCCCcEEEEEEeCCcEEEEEEEEcCCEEEECCCCeECCHHHHHHHHhhCcCcccCC
Confidence            79999666555 5799999999998889999999999999999997555666665 589999999999999998765445


Q ss_pred             CcceEEcCccccC
Q psy8455          79 ESALILRNPVAKC   91 (101)
Q Consensus        79 ~~~~~L~~Pv~~~   91 (101)
                      +..+.|+.||+++
T Consensus       109 ~l~~~L~~P~~~p  121 (122)
T 2lnw_A          109 QLDTTLKYPYKSR  121 (122)
T ss_dssp             TCCCCCCBCSSSC
T ss_pred             CcCeeeCCcCCCC
Confidence            6678999999875

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.93  E-value=1.1e-25  Score=133.11  Aligned_cols=85  Identities=21%  Similarity=0.355  Sum_probs=72.6

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC------CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK------DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~------~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.++      ...|+||.+||+||+.+
T Consensus        10 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~   89 (103)
T 1i3z_A           10 LTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKP   89 (103)
T ss_dssp             CCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSS
T ss_pred             CCHHHHHHHHhhcCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhC
Confidence            799997666554  499999999998899999999999999999997 667888776      47999999999999998


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|..||+|
T Consensus        90 ~~~l-----~~~L~~P~~R  103 (103)
T 1i3z_A           90 GQGL-----VVHLSNPIMR  103 (103)
T ss_dssp             SSSS-----SSCCCEECC-
T ss_pred             CCCC-----eEEcCCccCC
Confidence            7654     4789999976

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.92  E-value=1.9e-25  Score=135.40  Aligned_cols=89  Identities=20%  Similarity=0.321  Sum_probs=77.3

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.+++.   
T Consensus        23 isR~~Ae~lL~~~g~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LI~~y~~~~l~---   99 (119)
T 2gsb_A           23 ISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIV---   99 (119)
T ss_dssp             SCHHHHHHHHHHTCCSSEEEEEECSSSTTCEEEEEECSSCBCCCCEEEETTTEEEESSCCBSCHHHHHHHHTTSCSB---
T ss_pred             CCHHHHHHHHhhcCCCCeEEEEeCCCCCCceEEEEEECCEEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCccC---
Confidence            789997666653  589999999999899999999999999999996 56788989889999999999999998764   


Q ss_pred             cCcceEEcCccccCCCC
Q psy8455          78 AESALILRNPVAKCATG   94 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~   94 (101)
                        ..+.|+.||+++.+.
T Consensus       100 --~~~~L~~Pv~~~~~~  114 (119)
T 2gsb_A          100 --EGYYLKEPVPMQDQS  114 (119)
T ss_dssp             --TTBCCCCCCCCCCCC
T ss_pred             --CCCEeCCccCCCCCC
Confidence              347899999986653

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.92  E-value=1.5e-25  Score=135.80  Aligned_cols=91  Identities=30%  Similarity=0.417  Sum_probs=75.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEe-CCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRT-KDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. ..+|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+ +...|+||.+||+||+.+..++  
T Consensus        23 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~gl--  100 (119)
T 2ecd_A           23 VSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTVADGL--  100 (119)
T ss_dssp             CCHHHHHHHHHTSCTTBEEEEEESSSTTEEEEEEECSSCEEEECCCCCSSSCCCCCSSCCCSSHHHHHHHHHHCCTTS--
T ss_pred             CCHHHHHHHhcCCCCCeEEEEeCCCCCCCEEEEEEECCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHHHHhhCCCCC--
Confidence            78999665554 3599999999998899999999999999999996 45676655 4689999999999999987644  


Q ss_pred             cCcceEEcCccccCCCCCC
Q psy8455          78 AESALILRNPVAKCATGAH   96 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~~~   96 (101)
                         .+.|+.||+++.++..
T Consensus       101 ---~~~L~~P~~~~~~p~~  116 (119)
T 2ecd_A          101 ---VTTLHYPAPKCNKSGP  116 (119)
T ss_dssp             ---SSCCCBCCSSCCSSCC
T ss_pred             ---ceECCCccCCCCCCCC
Confidence               4789999999765543

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.92  E-value=4.6e-25  Score=133.64  Aligned_cols=89  Identities=20%  Similarity=0.354  Sum_probs=75.6

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC------cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD------RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~------~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+|||+.++.++||+|. ..+|.|.+++      ..|+||.+||+||+.+
T Consensus        17 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~eLV~~y~~~   96 (119)
T 2ysx_A           17 ITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKE   96 (119)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSCTTSEEEEEECSSCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHHHHHHTTSS
T ss_pred             CCHHHHHHHHhhcCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHHHHHHHhhC
Confidence            799997665543  599999999999899999999999999999996 5677787763      6999999999999998


Q ss_pred             CcCccccCcceEEcCccccCCCC
Q psy8455          72 QLPIISAESALILRNPVAKCATG   94 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~~~~   94 (101)
                      ++++     .+.|+.||+++.+.
T Consensus        97 ~~~l-----~~~L~~P~~~~~~~  114 (119)
T 2ysx_A           97 NMGL-----VTHLQYPVPLEEED  114 (119)
T ss_dssp             SSSS-----SSCCCEECCCCCCC
T ss_pred             CCCC-----CeECCCcCCCCCCC
Confidence            8754     47899999986543

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.92  E-value=4.9e-25  Score=137.06  Aligned_cols=93  Identities=24%  Similarity=0.322  Sum_probs=77.1

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCC--CCCCEEEEEEeCCeEEEEEEE-CCCC-eEEeC-----CcccCCHHHHHHHHh
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQG--SPGQYVLTGYQGGTKKHLLLI-DPEG-VVRTK-----DRMFESVSHLVNYHC   69 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~--~~g~~~Lsv~~~~~~~h~~I~-~~~~-~~~~~-----~~~F~sl~~LI~~y~   69 (101)
                      |+|++|++.|+  .++|+||||+|++  .+|.|+|||+.++.++||+|. ..+| .|.++     ...|+||.+||+||+
T Consensus        30 isR~eAe~lL~~~~~~G~FLVR~S~~~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl~eLV~~y~  109 (141)
T 2eo6_A           30 CDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQ  109 (141)
T ss_dssp             CCHHHHHHHHHHHCCTTCBCEEECSTTCSSCSEEEEEEETTEEEEEEECEETTTTEECSSSCCTTCCCBSSHHHHHHHHH
T ss_pred             CCHHHHHHHhhccCCCceEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEeCCCCEEEEccccCCCCccCCHHHHHHHHh
Confidence            79999766664  4799999999997  689999999999999999996 4455 47775     489999999999999


Q ss_pred             hCCcCccccCc----ceEEcCccccCCC
Q psy8455          70 QNQLPIISAES----ALILRNPVAKCAT   93 (101)
Q Consensus        70 ~~~~~l~~~~~----~~~L~~Pv~~~~~   93 (101)
                      .+++++++...    .+.|++||.+...
T Consensus       110 ~~~~~l~~~~~~~~~~~~L~~Pv~~~~~  137 (141)
T 2eo6_A          110 HNPLVLIDSQNNTKDSTRLKYAVKVSSG  137 (141)
T ss_dssp             HSCCCCCCSSSCCCCCCCCCCBCCCCCC
T ss_pred             hCCccceecccCCCCceEeCcCcccCCC
Confidence            99998854322    6789999987643

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.92  E-value=5e-25  Score=135.03  Aligned_cols=88  Identities=24%  Similarity=0.361  Sum_probs=75.4

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC------CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK------DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~------~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.++      ...|+||.+||+||+.+
T Consensus        11 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~   90 (128)
T 1ka6_A           11 ISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKP   90 (128)
T ss_dssp             CCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEESSSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHHHHHTTSS
T ss_pred             CCHHHHHHHHhcCCCCCEEEEeecCCCCCCEEEEEEeCCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHHHHHHhhC
Confidence            799996665542  799999999998899999999999999999997 567888776      48999999999999998


Q ss_pred             CcCccccCcceEEcCccccCCC
Q psy8455          72 QLPIISAESALILRNPVAKCAT   93 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~~~   93 (101)
                      +.++     .+.|+.||+++..
T Consensus        91 ~~gl-----~~~L~~P~~~~~~  107 (128)
T 1ka6_A           91 DQGI-----VIPLQYPVEKKSS  107 (128)
T ss_dssp             CSSS-----SSCCCSBCCSSCC
T ss_pred             CCCC-----cEEcCCcCCCCCC
Confidence            7644     4789999998764

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.92  E-value=5.5e-25  Score=130.62  Aligned_cols=85  Identities=24%  Similarity=0.361  Sum_probs=70.6

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CC-CC--eEEeC--CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DP-EG--VVRTK--DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~-~~--~~~~~--~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|..   ++|+||||+|++.+|.|+||++.++.++||+|. .. +|  +|.++  ...|+||.+||+||+.+
T Consensus        12 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~   91 (105)
T 1nrv_A           12 ISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLN   91 (105)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEeCCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHHHHHhhhC
Confidence            799997666653   599999999999899999999999999999996 32 45  46675  37999999999999998


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|+.||+|
T Consensus        92 ~~~l-----~~~L~~p~~r  105 (105)
T 1nrv_A           92 KGVL-----PCKLKHHCIR  105 (105)
T ss_dssp             CTTS-----SSCCCEECCC
T ss_pred             CCCC-----cEeCCCcCCC
Confidence            8766     4789999975

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.92  E-value=1.1e-24  Score=132.06  Aligned_cols=91  Identities=22%  Similarity=0.324  Sum_probs=75.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC--CcccCCHHHHHHHHhhCCcCcc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK--DRMFESVSHLVNYHCQNQLPII   76 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~--~~~F~sl~~LI~~y~~~~~~l~   76 (101)
                      |+|++|++.|. .++|+||||+|++.+| |+||++.++.++||+|. ..+|.|.+.  ...|+||.+||+||+.+++.. 
T Consensus        23 isR~~Ae~lL~~~~~G~FLVR~S~~~~~-y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~~y~~~~l~~-  100 (119)
T 2cs0_A           23 ISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEP-  100 (119)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSCCSS-
T ss_pred             CCHHHHHHHhcCCCCCEEEEEecCCCCC-EEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHHHHhhCcCCC-
Confidence            78999666554 3599999999999888 99999999999999996 556677774  479999999999999987642 


Q ss_pred             ccCcceEEcCccccCCCCCC
Q psy8455          77 SAESALILRNPVAKCATGAH   96 (101)
Q Consensus        77 ~~~~~~~L~~Pv~~~~~~~~   96 (101)
                         .++.|+.||+++.+...
T Consensus       101 ---~~~~L~~P~~~~~p~~~  117 (119)
T 2cs0_A          101 ---RRELLTQPCRQKDSGPS  117 (119)
T ss_dssp             ---CCCCCCSBCCCSSCCSS
T ss_pred             ---CCCEeCccCCCCCCCCC
Confidence               23789999999766543

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.92  E-value=1.8e-25  Score=136.36  Aligned_cols=90  Identities=27%  Similarity=0.308  Sum_probs=75.4

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCc-ccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDR-MFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~-~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|..  ++|+||||+|+ .+|.|+||++.++.++||+|...++.|.++.. .|+||.+||+||+.+++.+  
T Consensus        26 isR~eAe~lL~~~~~~G~FLVR~S~-~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~--  102 (124)
T 2eob_A           26 LSRGEAEDMLMRIPRDGAFLIRKRE-GTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKHALYR--  102 (124)
T ss_dssp             CCHHHHHHHHHHCCSSSEEEEECCT-TSSCEEEEEEETTEEEEEEEEESSSCEESSSSCCBSSHHHHHHHHTTSCSSS--
T ss_pred             CCHHHHHHHHhcCCCCCEEEEEecC-CCCCEEEEEEeCCeEEEEEEEECCCEEEECCCCcCCCHHHHHHHHhhCCCCC--
Confidence            789996665553  58999999999 78999999999999999999866678888764 5999999999999998754  


Q ss_pred             cCcceEEcCccccCCCCCC
Q psy8455          78 AESALILRNPVAKCATGAH   96 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~~~   96 (101)
                         .+.|+.||+++.....
T Consensus       103 ---~~~L~~P~~~~~~~~~  118 (124)
T 2eob_A          103 ---KMRLRYPVTPELLERY  118 (124)
T ss_dssp             ---SCCSCEECCHHHHHHT
T ss_pred             ---CcCCCCcCCcHHHHHc
Confidence               4789999998654433

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.92  E-value=4.2e-25  Score=132.79  Aligned_cols=86  Identities=22%  Similarity=0.256  Sum_probs=73.3

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|+.   ++|+||||+|++.+|.|+||++.    ++.++||+|. ..+|.|.+. ...|+||.+||+||+.+
T Consensus        19 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~   98 (114)
T 1blj_A           19 ISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKK   98 (114)
T ss_dssp             CCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHC
T ss_pred             CCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCCHHHHHHHhhhC
Confidence            799997777763   69999999999989999999998    6899999996 456666664 58999999999999999


Q ss_pred             CcCccccCcceEEcCccccC
Q psy8455          72 QLPIISAESALILRNPVAKC   91 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      +.++     .+.|..||+++
T Consensus        99 ~~~l-----~~~L~~p~~~~  113 (114)
T 1blj_A           99 GDGL-----CQKLTLPCVNL  113 (114)
T ss_dssp             CSSS-----SSCCCCCSCCC
T ss_pred             CCCC-----ceecCccCCCC
Confidence            8766     37899999875

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.92  E-value=9.9e-25  Score=127.76  Aligned_cols=84  Identities=30%  Similarity=0.509  Sum_probs=71.2

Q ss_pred             CChHHHHhcccCC--CCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSRQ--DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~~--~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|...  +|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.++++   
T Consensus        10 isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~---   86 (96)
T 1jyr_A           10 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS---   86 (96)
T ss_dssp             CCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTSSCSC---
T ss_pred             CCHHHHHHHHhcCCCCcEEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCCCC---
Confidence            7999976666542  89999999999899999999999999999996 55788888889999999999999999864   


Q ss_pred             cCcceEEcCc
Q psy8455          78 AESALILRNP   87 (101)
Q Consensus        78 ~~~~~~L~~P   87 (101)
                      ....+.|+.|
T Consensus        87 ~~~~~~L~~~   96 (96)
T 1jyr_A           87 RNQQIFLRDI   96 (96)
T ss_dssp             SSSCCCCBCC
T ss_pred             CCCceEecCC
Confidence            3456666654

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.92  E-value=1.8e-24  Score=130.61  Aligned_cols=89  Identities=26%  Similarity=0.391  Sum_probs=73.4

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeC------CeEEEEEEE---CCCCeEEe-CCcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQG------GTKKHLLLI---DPEGVVRT-KDRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~------~~~~h~~I~---~~~~~~~~-~~~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|..  ++|+||||+| +.+|.|+|||+..      +.++||+|+   ..+|.|.+ +...|+||.+||+||
T Consensus        16 isR~~Ae~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl~~LV~~y   94 (118)
T 3s9k_A           16 ISRDKAEKLLLDTGKEGAFMVRDS-RTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYH   94 (118)
T ss_dssp             CCHHHHHHHHHHHCCTTCEEEEEC-SSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEECSCCCSCHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCeEEEEee-CCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECCCcccCCHHHHHHHh
Confidence            799997665544  5999999999 7789999999996      899999993   45566655 457999999999999


Q ss_pred             hhCCcCccccCcceEEcCccccCCCCC
Q psy8455          69 CQNQLPIISAESALILRNPVAKCATGA   95 (101)
Q Consensus        69 ~~~~~~l~~~~~~~~L~~Pv~~~~~~~   95 (101)
                      +.++.++     .+.|..||++++..+
T Consensus        95 ~~~~~~l-----~~~L~~Pv~~~~~~~  116 (118)
T 3s9k_A           95 QYNGGGL-----VTRLRYPVCGSPGIH  116 (118)
T ss_dssp             HHCCTTS-----SSCCCCCCCCSTTCC
T ss_pred             eeCCCCC-----ccCCCCcCCCCCCCC
Confidence            9998654     478999999887543

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.91  E-value=2.2e-24  Score=134.07  Aligned_cols=93  Identities=22%  Similarity=0.214  Sum_probs=77.2

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC----CcccCCHHHHHHHHhhCCc-C
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK----DRMFESVSHLVNYHCQNQL-P   74 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~----~~~F~sl~~LI~~y~~~~~-~   74 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...+|.|.++    ...|+||.+||+||+.+++ +
T Consensus        31 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI~~y~~~~~~g  110 (141)
T 2vif_A           31 ITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIGDSENG  110 (141)
T ss_dssp             CCHHHHHHHTTTSCTTCEEEEECSSTTCSEEEEEEETTEEEEEEEEEETTEEEETTCCSCCCBSSHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHhcCCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEEECCEEEEeecCCCCccCCHHHHHHHHhhCCCCC
Confidence            78999666554 3599999999999889999999999999999997557888887    5899999999999998873 4


Q ss_pred             cc---------ccCcceEEcCccccCCC
Q psy8455          75 II---------SAESALILRNPVAKCAT   93 (101)
Q Consensus        75 l~---------~~~~~~~L~~Pv~~~~~   93 (101)
                      +.         +...++.|++||.|..+
T Consensus       111 l~c~l~~~~~~~~~~~v~L~~Pv~R~~~  138 (141)
T 2vif_A          111 AFCYSRSRLPGSATYPVRLTNPVSRFMQ  138 (141)
T ss_dssp             CCEEESCCSTTCCCEECCCCCBCCSSCC
T ss_pred             cceeccccCCCCCccceEeCCCCccccc
Confidence            42         23457889999998764

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.91  E-value=1.7e-24  Score=132.43  Aligned_cols=85  Identities=28%  Similarity=0.398  Sum_probs=71.6

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEEC--CCCeEE--eC--CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID--PEGVVR--TK--DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~--~~~~~~--~~--~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|.+   ++|+||||+|++.+|.|+||++.++.++||+|..  .+|.|.  ++  ...|+||.+||+||+.+
T Consensus        33 isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eLV~~y~~~  112 (126)
T 2aug_A           33 ISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQLN  112 (126)
T ss_dssp             CCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEcCCeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHHHHHHhhC
Confidence            799997666654   4899999999998999999999999999999963  367554  34  37999999999999999


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|+.||+|
T Consensus       113 ~~~l-----~~~L~~P~~r  126 (126)
T 2aug_A          113 KGVL-----PCKLKHYCAR  126 (126)
T ss_dssp             CTTS-----SSCCCEECCC
T ss_pred             CCCC-----ceecCCCcCC
Confidence            8766     4789999975

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.91  E-value=2.4e-24  Score=133.55  Aligned_cols=92  Identities=28%  Similarity=0.390  Sum_probs=72.4

Q ss_pred             CChHHHHhcccC-------CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CC-CC--eEEeC-CcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPSR-------QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DP-EG--VVRTK-DRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll~-------~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~-~~--~~~~~-~~~F~sl~~LI~~y   68 (101)
                      -+|++|++.|..       ++|+||||+|++.+|.|+|||+.++.++||+|. .. +|  .|.+. +..|+||.+||+||
T Consensus        30 ~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~F~sl~eLI~~y  109 (138)
T 2dx0_A           30 ESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHY  109 (138)
T ss_dssp             CCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSCBSSHHHHHHHT
T ss_pred             CCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCcCCCHHHHHHHH
Confidence            079997666652       799999999998889999999999999999996 32 34  56664 68999999999999


Q ss_pred             hhCCcCccccCcceEEcCccccCCCC
Q psy8455          69 CQNQLPIISAESALILRNPVAKCATG   94 (101)
Q Consensus        69 ~~~~~~l~~~~~~~~L~~Pv~~~~~~   94 (101)
                      +.++++.  .+..+.|+.||+++.+.
T Consensus       110 ~~~~l~~--~gl~~~L~~Pv~~~~p~  133 (138)
T 2dx0_A          110 REAHLRC--AEFELRLTDPVPNPNPS  133 (138)
T ss_dssp             TTSCCCC--GGGSSCCCCBCC-----
T ss_pred             hhCCCCC--CCcccccCccCCCCCCC
Confidence            9998743  34678999999987654

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.91  E-value=4e-25  Score=131.33  Aligned_cols=85  Identities=25%  Similarity=0.297  Sum_probs=71.7

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+.   ++|+||||+|++.+|.|+||++.     ++.++||+|. ..+|.|.+. ...|+||.+||+||+.
T Consensus        12 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~   91 (106)
T 1aot_F           12 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSE   91 (106)
T ss_dssp             CCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESSHHHHHHHHTT
T ss_pred             CCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCCHHHHHHHhcc
Confidence            799997766654   59999999999989999999996     6899999996 456766664 6899999999999999


Q ss_pred             CCcCccccCcceEEcCcccc
Q psy8455          71 NQLPIISAESALILRNPVAK   90 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      ++.++     .+.|..||++
T Consensus        92 ~~~~l-----~~~L~~p~~~  106 (106)
T 1aot_F           92 RAAGL-----SSRLVVPSHK  106 (106)
T ss_dssp             CCTTS-----SSCSCSSCCC
T ss_pred             CCCCC-----cEeecccCCC
Confidence            98766     3789999975

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.91  E-value=3.9e-24  Score=129.07  Aligned_cols=86  Identities=30%  Similarity=0.435  Sum_probs=69.5

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-C-CCCe--EEeC--CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-D-PEGV--VRTK--DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~-~~~~--~~~~--~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|..   ++|+||||+|++.+|.|+||++.++.++||+|. . .+|.  |.++  ...|+||.+||+||+.+
T Consensus        21 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~  100 (117)
T 3pqz_A           21 ISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLN  100 (117)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEETTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHHHHHHHHC
T ss_pred             CCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEeCCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHHHHHHhhC
Confidence            789997666653   499999999999889999999999999999996 3 4563  3443  47999999999999999


Q ss_pred             CcCccccCcceEEcCccccC
Q psy8455          72 QLPIISAESALILRNPVAKC   91 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      ++++     .+.|..||+|.
T Consensus       101 ~~~l-----~~~L~~P~~~~  115 (117)
T 3pqz_A          101 RGIL-----PCLLRHCCTRV  115 (117)
T ss_dssp             CTTS-----SSCCCEECC--
T ss_pred             CCCC-----cEECCCcCccc
Confidence            8765     47899999874

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.90  E-value=8.1e-24  Score=124.69  Aligned_cols=75  Identities=24%  Similarity=0.391  Sum_probs=66.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.++++.
T Consensus        16 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~   92 (100)
T 1r1p_A           16 LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSISK   92 (100)
T ss_dssp             CCHHHHHHHHHTSCTTBEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCEESSHHHHHHHHTTSCSSS
T ss_pred             CCHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeCCEeCCHHHHHHHHHhCCCCC
Confidence            78999666555 3599999999999899999999999999999996 457888888899999999999999998755

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.90  E-value=1.6e-23  Score=133.70  Aligned_cols=92  Identities=23%  Similarity=0.282  Sum_probs=74.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCC--------cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKD--------RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~--------~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...+|.|.+++        ..|+||.+||+||+.+
T Consensus        24 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eLI~~y~~~  103 (169)
T 2c9w_A           24 MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQM  103 (169)
T ss_dssp             CCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHH
T ss_pred             CCHHHHHHHcCCCCCcEEEEecCCCCCCeEEEEEEECCeeEEEEEEEeCCEEEEccccCccccCCCCCCHHHHHHHHHhC
Confidence            78999666554 35999999999988899999999999999999975678888876        7999999999999998


Q ss_pred             CcCc-------cccCcceEEcCccccCC
Q psy8455          72 QLPI-------ISAESALILRNPVAKCA   92 (101)
Q Consensus        72 ~~~l-------~~~~~~~~L~~Pv~~~~   92 (101)
                      +++.       ...+..+.|+.||.+..
T Consensus       104 ~~~~~~~~~~~~~~~~~~~L~~P~~~~~  131 (169)
T 2c9w_A          104 CKDKRTGPEAPRNGTVHLYLTKPLYTSA  131 (169)
T ss_dssp             TC--------------CCCCCCBCCSSC
T ss_pred             cCCCcccccCCCCcCccceecCcccccc
Confidence            8752       11345678999998744

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.90  E-value=5e-24  Score=130.05  Aligned_cols=86  Identities=24%  Similarity=0.421  Sum_probs=71.6

Q ss_pred             CChHHHHhccc-C-CCCcEEEEeeCCCCCCEEEEEEe------CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPS-R-QDGDFLVRESQGSPGQYVLTGYQ------GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll-~-~~G~FLvR~s~~~~g~~~Lsv~~------~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|. . ++|+||||+| +.+|.|+|||+.      .+.++||+|. ..+|.|.+. ...|+||.+||+||+.
T Consensus        23 isR~eAe~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~  101 (125)
T 2dm0_A           23 ITRNQAEHLLRQESKEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPELIWYHQH  101 (125)
T ss_dssp             CCHHHHHHHHHHHCSTTCBCEEEE-TTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSSHHHHHHHHTT
T ss_pred             CCHHHHHHHHhhcCCCCEEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCCHHHHHHHhhh
Confidence            79999666554 2 7999999999 568999999998      4689999996 556777765 5899999999999999


Q ss_pred             CCcCccccCcceEEcCccccCC
Q psy8455          71 NQLPIISAESALILRNPVAKCA   92 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~~~   92 (101)
                      ++.++     .+.|+.||+++.
T Consensus       102 ~~~~l-----~~~L~~P~~~~~  118 (125)
T 2dm0_A          102 NAAGL-----MTRLRYPVGLMG  118 (125)
T ss_dssp             CCCSS-----SCCCCSBCCSSC
T ss_pred             CCCCC-----ccCCCCccCCCC
Confidence            98765     478999999864

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=128.65  Aligned_cols=88  Identities=24%  Similarity=0.520  Sum_probs=72.8

Q ss_pred             CChHHHHhccc-C-CCCcEEEEeeCCCCCCEEEEEEe------CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPS-R-QDGDFLVRESQGSPGQYVLTGYQ------GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll-~-~~G~FLvR~s~~~~g~~~Lsv~~------~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|. . ++|+||||+| +.+|.|+|||+.      ++.++||+|. ..+|.|.+. +..|+||.+||+||+.
T Consensus        18 isR~eAe~lL~~~g~~G~FLVR~S-s~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~   96 (125)
T 2ge9_A           18 MTRSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQH   96 (125)
T ss_dssp             CCHHHHHHHHHHHTCTTEEEEEEC-SSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSSHHHHHHHHHC
T ss_pred             CCHHHHHHHHhhcCCCceEEEEec-CCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHHHHHhhh
Confidence            79999666554 2 7999999999 568999999997      4799999996 556877775 4799999999999999


Q ss_pred             CCcCccccCcceEEcCccccCCCC
Q psy8455          71 NQLPIISAESALILRNPVAKCATG   94 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~~~~~   94 (101)
                      ++.++     .+.|+.||+++...
T Consensus        97 ~~~~l-----~~~L~~P~~~~~~~  115 (125)
T 2ge9_A           97 NSAGL-----ISRLKYPVSQQNKN  115 (125)
T ss_dssp             CCTTC-----SCCSSEECCSSCCC
T ss_pred             CCCCC-----ceeCCCccCCCCCC
Confidence            98755     47899999986543

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.90  E-value=9.3e-24  Score=126.25  Aligned_cols=83  Identities=29%  Similarity=0.528  Sum_probs=68.7

Q ss_pred             CChHHHHhccc-C-CCCcEEEEeeCCCCCCEEEEEEe------CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPS-R-QDGDFLVRESQGSPGQYVLTGYQ------GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll-~-~~G~FLvR~s~~~~g~~~Lsv~~------~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|. . ++|+||||+| +.+|.|+|||+.      ++.++||+|. ..+|.|.+. ...|+||.+||+||+.
T Consensus        18 isR~~Ae~lL~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~   96 (110)
T 2ekx_A           18 ISRSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQH   96 (110)
T ss_dssp             CCHHHHHHHHHHTCCTTEEEEEEC-SSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSCHHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCCHHHHHHHHee
Confidence            79999766554 3 7999999999 558999999996      4789999996 456767775 5799999999999999


Q ss_pred             CCcCccccCcceEEcCccc
Q psy8455          71 NQLPIISAESALILRNPVA   89 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~   89 (101)
                      ++.++     .+.|+.||+
T Consensus        97 ~~~~l-----~~~L~~Pv~  110 (110)
T 2ekx_A           97 NSAGM-----ITRLRHPVS  110 (110)
T ss_dssp             SCCSS-----SCCCCEECC
T ss_pred             CCCCC-----ceecCccCC
Confidence            98655     478999985

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.89  E-value=3.1e-23  Score=127.52  Aligned_cols=83  Identities=30%  Similarity=0.466  Sum_probs=69.4

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeC---------------CeEEEEEEE-CCCCeEEe----CCcccC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQG---------------GTKKHLLLI-DPEGVVRT----KDRMFE   59 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~---------------~~~~h~~I~-~~~~~~~~----~~~~F~   59 (101)
                      |+|++|++.|. +++|+||||+|++.+|.|+|||+..               +.++||+|. ..+| |.+    +...|+
T Consensus        27 isR~eAe~lL~~~~~G~FLVR~S~s~~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~~~g-~~l~g~~~~~~F~  105 (131)
T 2kno_A           27 LSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKG-VKIKGCPSEPYFG  105 (131)
T ss_dssp             CCHHHHHHHHTTSCTTBEEEEECSSSTTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECCSSC-CCEETCSSCCCCC
T ss_pred             CCHHHHHHHhcCCCCCeEEEecCCCCCCCEEEEEEeCCCCcccccccccccCCceEEEEEEECCCC-CEEecCCCCCccC
Confidence            79999766665 4699999999999899999999986               379999997 4456 555    457999


Q ss_pred             CHHHHHHHHhhCCcCccccCcceEEcCccc
Q psy8455          60 SVSHLVNYHCQNQLPIISAESALILRNPVA   89 (101)
Q Consensus        60 sl~~LI~~y~~~~~~l~~~~~~~~L~~Pv~   89 (101)
                      ||.+||+||+.+++++.     +.|..|+.
T Consensus       106 SL~eLV~~y~~~~~~L~-----~~L~~P~~  130 (131)
T 2kno_A          106 SLSALVSQHSISPISLP-----CCLRIPSK  130 (131)
T ss_dssp             SHHHHHHTTTTCCSSCS-----SCCBCSSC
T ss_pred             CHHHHHHHHhhCCCCCC-----eECCCcCC
Confidence            99999999999988663     78999884

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.88  E-value=1.2e-22  Score=129.94  Aligned_cols=85  Identities=22%  Similarity=0.276  Sum_probs=72.4

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+.   ++|+||||+|++.+|.|+||++.     ++.++||+|. ..+|.|.+.+ ..|+||.+||+||+.
T Consensus        81 isr~~ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~  160 (175)
T 4d8k_A           81 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTN  160 (175)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHHHHHHHHH
T ss_pred             ccHHHHHHHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHHHHHHHhh
Confidence            689997666654   49999999999889999999998     7899999996 5567777765 899999999999999


Q ss_pred             CCcCccccCcceEEcCcccc
Q psy8455          71 NQLPIISAESALILRNPVAK   90 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      ++.++     .+.|..||++
T Consensus       161 ~~~gl-----~~~L~~Pc~~  175 (175)
T 4d8k_A          161 ASDGL-----CTRLSRPCQT  175 (175)
T ss_dssp             CCTTS-----SSCCCSBCCC
T ss_pred             CCCCC-----cccCCCcCCC
Confidence            98765     3789999963

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.88  E-value=5.2e-23  Score=129.33  Aligned_cols=72  Identities=21%  Similarity=0.255  Sum_probs=62.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCC--------cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKD--------RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~--------~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|...+|.|.+++        ..|+||.+||+||+.+
T Consensus        41 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~~Y~~~  120 (152)
T 2hmh_A           41 VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVHHYMPP  120 (152)
T ss_dssp             CCHHHHHHHHHTSCTTEEEEEECCSTTCSEEEEEEETTEEEEEEEECGGGCBEECBCTTCSSCCCCBSSHHHHHHHTCCC
T ss_pred             CCHHHHHHHhcCCCCCcEEEEeCCCCCCcEEEEEEcCCceEEEEEEecCCEEEEecccccccccCccCCHHHHHHHHhhC
Confidence            79999666554 47999999999998899999999999999999986666676653        8999999999999988


Q ss_pred             C
Q psy8455          72 Q   72 (101)
Q Consensus        72 ~   72 (101)
                      +
T Consensus       121 ~  121 (152)
T 2hmh_A          121 Q  121 (152)
T ss_dssp             C
T ss_pred             c
Confidence            6

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.88  E-value=8e-23  Score=132.20  Aligned_cols=90  Identities=13%  Similarity=0.125  Sum_probs=75.4

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCC-----cccCCHHHHHHHHhhCCcC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKD-----RMFESVSHLVNYHCQNQLP   74 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~-----~~F~sl~~LI~~y~~~~~~   74 (101)
                      |+|+||++.|. ..+|+||||+|++.++.|+||++.++.++||+|...+|.|.++.     ..|+||.+||+||+.++.+
T Consensus        41 isR~eAE~lL~~~~dGtFLVR~S~~~~~~lsLSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV~hY~~~~~~  120 (187)
T 2izv_A           41 MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSAC  120 (187)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTCCGGGC
T ss_pred             CCHHHHHHHhcCCCCCcEEEEECCCCCceEEEEEeeCCeEEEEEEEECCCEEEEeccCCCccccCCHHHHHHHHHhcccc
Confidence            79999766655 36999999999987778999999999999999975578788764     2899999999999998876


Q ss_pred             ccccCcceEEcCccccCCC
Q psy8455          75 IISAESALILRNPVAKCAT   93 (101)
Q Consensus        75 l~~~~~~~~L~~Pv~~~~~   93 (101)
                      +.   ..+.|+.||.+..+
T Consensus       121 ~~---~~~~L~~Pv~r~~p  136 (187)
T 2izv_A          121 MF---FEPLLSTPLIRTFP  136 (187)
T ss_dssp             CT---TSCCCCEECCCCSC
T ss_pred             cc---cccccccccccccc
Confidence            52   35789999998754

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.88  E-value=1.4e-22  Score=122.99  Aligned_cols=83  Identities=14%  Similarity=0.163  Sum_probs=66.0

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEe---CCeEEEEEEECCCCeEEeC---CcccCCHHHHHHHHhhCC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQ---GGTKKHLLLIDPEGVVRTK---DRMFESVSHLVNYHCQNQ   72 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~---~~~~~h~~I~~~~~~~~~~---~~~F~sl~~LI~~y~~~~   72 (101)
                      |+|.+|++.|+.  .+|+||||+|++.+ .|+|||+.   .+.|+||+|+..+|.|.+.   ...|+||.|||+||+.++
T Consensus        22 isR~eAE~lL~~~~~~GaFLVR~Se~~~-~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV~yY~~~a  100 (125)
T 3maz_A           22 VSRKEATEMLQKNPSLGNMILRPGSDSR-NYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYFVKET  100 (125)
T ss_dssp             CCHHHHHHHHHHCGGGCSEEEEECTTSS-SEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHhccCCCCcEEEEeCCCCC-CEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHHHHHHhCC
Confidence            789997754442  48999999998765 89999998   5789999997436777776   257999999999999999


Q ss_pred             cCccccCcceEEcCccc
Q psy8455          73 LPIISAESALILRNPVA   89 (101)
Q Consensus        73 ~~l~~~~~~~~L~~Pv~   89 (101)
                      ++++     +.|..||.
T Consensus       101 dGl~-----~~L~~~c~  112 (125)
T 3maz_A          101 RGNL-----RPFIASTD  112 (125)
T ss_dssp             TTCC-----CBCCC---
T ss_pred             CcCc-----cccccccc
Confidence            8875     56888884

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.88  E-value=1.5e-22  Score=142.36  Aligned_cols=95  Identities=28%  Similarity=0.382  Sum_probs=80.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCC-CCCEEEEEEeCCeEEEEEEECCCCeEEeCC-cccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGS-PGQYVLTGYQGGTKKHLLLIDPEGVVRTKD-RMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~-~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. .++|+||||+|++. +|.|+|||+.++.++||+|...+|.|.+++ ..|+||.+||+||+.++++..+
T Consensus        17 IsR~eAE~lL~~~~dG~FLVR~S~s~~~g~y~LSvr~~~~v~H~rI~~~~g~y~l~~~~~F~SL~eLV~~Y~~~~l~~~~   96 (373)
T 3hhm_B           17 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYN   96 (373)
T ss_dssp             CCHHHHHHHTTTCCTTEEEEEECSCC--CCEEEEEEETTEEEEEEECCSSSCBCSSSSCCBSSSHHHHHHHHHSCGGGSC
T ss_pred             CCHHHHHHHhcCCCCCCEEEeccCCCCCCCEEEEEEECCeeEEEEEEecCCeEEeCCCCCcCCHHHHHHHHhhCCccccC
Confidence            79999666555 37999999999998 899999999999999999986667777765 8999999999999999987666


Q ss_pred             cCcceEEcCccccCCCCC
Q psy8455          78 AESALILRNPVAKCATGA   95 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~~~   95 (101)
                      .+..+.|..||+++.+..
T Consensus        97 ~gl~~~L~~Pv~r~~qd~  114 (373)
T 3hhm_B           97 PKLDVKLLYPVSKYQQDQ  114 (373)
T ss_dssp             TTCCCCCCEECCSCCC-C
T ss_pred             CCCCcccCCCCCCcchhh
Confidence            677899999999876543

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.88  E-value=4.6e-22  Score=133.83  Aligned_cols=89  Identities=20%  Similarity=0.244  Sum_probs=76.3

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+   ..+|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+. +..|+||.+||+||+.++.++
T Consensus        13 isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l   92 (254)
T 2oq1_A           13 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGL   92 (254)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCCTTS
T ss_pred             CCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHHHHHhCCCCc
Confidence            79999766664   3699999999999899999999999999999997 467777775 589999999999999988655


Q ss_pred             cccCcceEEcCccccCCCC
Q psy8455          76 ISAESALILRNPVAKCATG   94 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~~~   94 (101)
                           .+.|..||+++.+.
T Consensus        93 -----~~~L~~p~~~~~~~  106 (254)
T 2oq1_A           93 -----PCNLRKPCNRPSGL  106 (254)
T ss_dssp             -----SSCCCSBCCCCTTC
T ss_pred             -----ccccccccCCCCCC
Confidence                 47899999987653

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.88  E-value=1.1e-22  Score=129.19  Aligned_cols=88  Identities=18%  Similarity=0.195  Sum_probs=74.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCC--------cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKD--------RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~--------~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+|||+.++.++||+|...+|.|.+++        ..|+||.+||+||+.+
T Consensus        30 IsR~eAe~lL~~~~~GtFLVR~S~s~~g~y~LSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~~Y~~~  109 (164)
T 2bbu_A           30 VTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPP  109 (164)
T ss_dssp             SCHHHHHHHHHHSSTTCCEEEECSTTSCCEEEEECCTTCCEEEECEEETTEEESSSCCCCCSSCTTCCHHHHHHHHHSCC
T ss_pred             CCHHHHHHHhcCCCCCCEEEEECCCCCCCEEEEEEECCceEEEEEEeCCCeEEEecCcccccCCCccCCHHHHHHHHhhC
Confidence            78999666544 57999999999988999999999999999999976678888864        6999999999999998


Q ss_pred             CcCccccCcceEEcCccccC
Q psy8455          72 QLPIISAESALILRNPVAKC   91 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      ++.   .+..+.|..|++..
T Consensus       110 ~~~---~~~~~~l~ep~~~~  126 (164)
T 2bbu_A          110 PGT---PSFSLPPTEPSSEV  126 (164)
T ss_dssp             CSC---SCCSSSCSSCCSSC
T ss_pred             CCC---CCccccccCCCccc
Confidence            873   34567788888754

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.87  E-value=4.6e-23  Score=124.75  Aligned_cols=76  Identities=20%  Similarity=0.267  Sum_probs=65.8

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEe----CCeEEEEEEECCCCeEEeC-Cccc--CCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQ----GGTKKHLLLIDPEGVVRTK-DRMF--ESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~----~~~~~h~~I~~~~~~~~~~-~~~F--~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|++  ++|+||||+|++.+|.|+|||+.    ++.++||+|...+|.|.+. ...|  +||.+||+||+.+
T Consensus        28 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~g~~~i~~~~~F~~~sL~eLV~~y~~~  107 (118)
T 2el8_A           28 VSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSH  107 (118)
T ss_dssp             CCHHHHHHHHHHSSTTCSBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCCBTTBCCBSSSSCCCCSSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhhCCCCcEEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEEcCCEEEEeCCCeECCCCHHHHHHHHhhC
Confidence            799997666653  69999999999989999999999    8899999997566777775 4789  9999999999999


Q ss_pred             CcCcc
Q psy8455          72 QLPII   76 (101)
Q Consensus        72 ~~~l~   76 (101)
                      +++++
T Consensus       108 ~~gl~  112 (118)
T 2el8_A          108 TKKAL  112 (118)
T ss_dssp             SSSCC
T ss_pred             CCCCe
Confidence            88774

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.87  E-value=1e-21  Score=132.11  Aligned_cols=88  Identities=22%  Similarity=0.375  Sum_probs=75.6

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+   .++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+. +..|+||.+||+||+.++.++
T Consensus        12 isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv~~y~~~~~~l   91 (254)
T 1a81_A           12 ITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGL   91 (254)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCCTTS
T ss_pred             CCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHHHHHHhCCCCc
Confidence            78999766664   3699999999999899999999999999999997 467777775 689999999999999987655


Q ss_pred             cccCcceEEcCccccCCC
Q psy8455          76 ISAESALILRNPVAKCAT   93 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~~   93 (101)
                           .+.|+.||+++.+
T Consensus        92 -----~~~L~~p~~~~~~  104 (254)
T 1a81_A           92 -----VCLLKKPFNRPQG  104 (254)
T ss_dssp             -----SSCCCEECCCCSS
T ss_pred             -----eECCccccCCCCC
Confidence                 3789999988654

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.87  E-value=8.2e-22  Score=132.61  Aligned_cols=84  Identities=25%  Similarity=0.346  Sum_probs=73.0

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|..   ++|+||||+| +.+|.|+||++.++.++||+|. ..+|.|.+. ...|+||.+||+||+.++.++
T Consensus       166 isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l  244 (254)
T 2oq1_A          166 LTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGL  244 (254)
T ss_dssp             CCHHHHHHHHHSSCCCTTEEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHHCCTTS
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCCEEECCCceECCHHHHHHHHHhCCCCC
Confidence            789997666653   6999999999 7789999999999999999996 567878775 589999999999999998766


Q ss_pred             cccCcceEEcCcccc
Q psy8455          76 ISAESALILRNPVAK   90 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~   90 (101)
                      .     +.|+.||+|
T Consensus       245 ~-----~~L~~p~~r  254 (254)
T 2oq1_A          245 I-----YCLKEACPN  254 (254)
T ss_dssp             S-----SCCCSBCCC
T ss_pred             C-----eeCCccCcC
Confidence            3     689999975

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=5.9e-22  Score=121.09  Aligned_cols=79  Identities=20%  Similarity=0.347  Sum_probs=67.1

Q ss_pred             CCcEEEEeeCCCCCCEEEEEEeC--CeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCccccCcceEEcCcccc
Q psy8455          14 DGDFLVRESQGSPGQYVLTGYQG--GTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIISAESALILRNPVAK   90 (101)
Q Consensus        14 ~G~FLvR~s~~~~g~~~Lsv~~~--~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +|+||||+|+ .+|.|+|||+.+  +.++||+|...++.|.+. ...|+||.+||+||+.+++++   ...+.|+.|+++
T Consensus        44 dG~FLVR~S~-~~g~y~LSv~~~~~~~vkH~rI~~~~~~~~i~~~~~F~sL~eLV~hY~~~~l~~---~~~~~L~~P~~~  119 (126)
T 2cr4_A           44 DGLYCIRNSS-TKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMVEHYHTHVLPS---HQSLLLRHPYGY  119 (126)
T ss_dssp             TTCEEEEECS-STTCEEEEEEETTTTEECCEECEEETTEEESSSSCEESSHHHHHHHHTTSCCSS---SSSCCCCSBSSC
T ss_pred             CCeEEEEecC-CCCCEEEEEEeCCCCCEEEEEEEECCCeEEEcCCccCCCHHHHHHHHhhCCcCC---CCCEEeCCcCCC
Confidence            5999999999 789999999999  999999997444566665 579999999999999999977   256789999998


Q ss_pred             CCCCCC
Q psy8455          91 CATGAH   96 (101)
Q Consensus        91 ~~~~~~   96 (101)
                      +..+++
T Consensus       120 ~~~~~~  125 (126)
T 2cr4_A          120 TSGPSS  125 (126)
T ss_dssp             CCCTTT
T ss_pred             CCCCCC
Confidence            765543

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.87  E-value=1.1e-21  Score=132.03  Aligned_cols=84  Identities=23%  Similarity=0.330  Sum_probs=72.8

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|..   ++|+||||+| +.+|.|+||++.++.++||+|. ..+|.|.+. +..|+||.+||+||+.++.++
T Consensus       165 isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l  243 (254)
T 1a81_A          165 ISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGL  243 (254)
T ss_dssp             CCHHHHHHHHHSSCCCTTCEEEEEC-SSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTCCTTS
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHHHCCCCC
Confidence            789997666653   6999999999 7789999999999999999996 567878775 689999999999999998755


Q ss_pred             cccCcceEEcCcccc
Q psy8455          76 ISAESALILRNPVAK   90 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~   90 (101)
                           .+.|+.||++
T Consensus       244 -----~~~L~~p~~r  253 (254)
T 1a81_A          244 -----LRVLTVPCQK  253 (254)
T ss_dssp             -----SSCCCCBCCC
T ss_pred             -----CeecCCcCCC
Confidence                 3789999986

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.86  E-value=3.4e-22  Score=137.14  Aligned_cols=92  Identities=24%  Similarity=0.347  Sum_probs=75.2

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. .++|+||||.| +.+|.|+|||+.++.++||+|. ..+|+|..+. ..|+||.+||+||+.++++..+
T Consensus       201 IsR~eAE~lL~~~~~GtFLVR~S-s~~g~y~LSv~~~~~V~H~rI~~~~~g~~~~~~~~~F~SL~eLV~~Y~~~~L~~~~  279 (302)
T 2y3a_B          201 INRTQAEEMLSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHN  279 (302)
T ss_dssp             CCHHHHHHHHTTSCTTBEEBCCC-SSTTCEEEEEECSSSEEEEEEEEETTEEESBTTBCCCSSHHHHHHTTSSSCSTTTC
T ss_pred             CCHHHHHHHhcCCCCCcEEEEec-cCCCceEEEEEeCCeeEEEEEEECCCceEEeCCCCCCCCHHHHHHHHHhCCccccC
Confidence            78999665554 57999999999 7789999999999999999997 4445444444 6999999999999998876544


Q ss_pred             cCcceEEcCccccCCC
Q psy8455          78 AESALILRNPVAKCAT   93 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~~   93 (101)
                      .+..+.|..||+++.+
T Consensus       280 ~gl~~~L~~Pv~~~~P  295 (302)
T 2y3a_B          280 DALTVTLAHPVRAPGP  295 (302)
T ss_dssp             SSCCCCCSBCSCCCC-
T ss_pred             CCCceeeCCccCCCCC
Confidence            5677899999998654

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.86  E-value=1.2e-22  Score=135.02  Aligned_cols=87  Identities=29%  Similarity=0.469  Sum_probs=73.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCC------------------CeEEeCCcccCCH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE------------------GVVRTKDRMFESV   61 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~------------------~~~~~~~~~F~sl   61 (101)
                      |+|++|++.|. ..+|+||||+|++.+|.|+|||+.++.++||+|...+                  +.|.++...|+||
T Consensus        20 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~F~sl   99 (230)
T 2dvj_A           20 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSL   99 (230)
T ss_dssp             CCTTHHHHHHTTSSSSCBEEECCSSCTTSCEEECCCSSSCCCEECBCCCSCCSSSSSSSSTTTSCCCCCEESSSCEESSH
T ss_pred             CCHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCCcccccccccccccccceEEEeCCceeCCH
Confidence            78999666554 3599999999999899999999999999999996322                  4688888999999


Q ss_pred             HHHHHHHhhCCcCccccCcceEEcCccccCCC
Q psy8455          62 SHLVNYHCQNQLPIISAESALILRNPVAKCAT   93 (101)
Q Consensus        62 ~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~~~~   93 (101)
                      .+||+||+.+.+.      .+.|+.||++...
T Consensus       100 ~~LV~~y~~~~l~------~~~L~~Pv~~~~~  125 (230)
T 2dvj_A          100 PALLEFYKIHYLD------TTTLIEPVSRSRQ  125 (230)
T ss_dssp             HHHHTTSTTTCSS------SSCCCCBCCSCCC
T ss_pred             HHHHHHHhhCccc------ccccccccccccc
Confidence            9999999998763      2679999987653

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.86  E-value=1.2e-21  Score=131.40  Aligned_cols=85  Identities=26%  Similarity=0.409  Sum_probs=73.4

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|+.  ++|+||||+|+ .+|.|+||++.++.++||+|...++.|.+++..|+||.+||+||+.+++.+   
T Consensus       129 isr~~Ae~lL~~~~~~G~FLVR~s~-~~g~y~Lsv~~~~~v~H~~I~~~~~~~~~~~~~F~sL~~Lv~~y~~~p~~~---  204 (246)
T 4fbn_A          129 LTRAQAEHMLMRVPRDGAFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYR---  204 (246)
T ss_dssp             CCHHHHHHHHHTSCCTTEEEEEECS-STTEEEEEEEETTEEEEEEEEEETTEEEETTEEESCHHHHHHHHHHSCSBT---
T ss_pred             ccHHHHHHHHhhCCCCCeEEEEecC-CCCCEEEEEEeCCCeEEEEEEeCCCEEEeCCCccCCHHHHHHHhCcCCCCC---
Confidence            789997666654  48999999985 478999999999999999998667788889899999999999999998754   


Q ss_pred             CcceEEcCccccC
Q psy8455          79 ESALILRNPVAKC   91 (101)
Q Consensus        79 ~~~~~L~~Pv~~~   91 (101)
                        .+.|++||++.
T Consensus       205 --~~~L~~Pv~~~  215 (246)
T 4fbn_A          205 --KMKLRYPINEE  215 (246)
T ss_dssp             --TBCCCEECSHH
T ss_pred             --CcCCCCcCCCc
Confidence              47899999764

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.86  E-value=2e-21  Score=130.37  Aligned_cols=89  Identities=27%  Similarity=0.386  Sum_probs=69.8

Q ss_pred             ChHHHHhccc-------CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCC---eE-EeCCcccCCHHHHHHHHh
Q psy8455           2 SRIAKTAFPS-------RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEG---VV-RTKDRMFESVSHLVNYHC   69 (101)
Q Consensus         2 sR~~a~~~Ll-------~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~---~~-~~~~~~F~sl~~LI~~y~   69 (101)
                      +|++|++.|.       .++|+||||+|++.+|.|+||++.++.++||+|. ..++   .| ..++..|+||.+||+||+
T Consensus        17 sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~F~sl~~LV~~y~   96 (246)
T 4fbn_A           17 GRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQ   96 (246)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEETTEEESSHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecCCcccCCHHHHHHhHh
Confidence            7999666553       2699999999999999999999999999999995 3322   34 446689999999999999


Q ss_pred             hCCcCccccCcceEEcCccccCC
Q psy8455          70 QNQLPIISAESALILRNPVAKCA   92 (101)
Q Consensus        70 ~~~~~l~~~~~~~~L~~Pv~~~~   92 (101)
                      .+++.  +......+..|++...
T Consensus        97 ~~~l~--~~~~~~~l~~p~p~~~  117 (246)
T 4fbn_A           97 QVPLR--CNEFEMRLSEPVPQTN  117 (246)
T ss_dssp             HSCEE--CSSCEECCCCBCCCSC
T ss_pred             hcccc--cccccccccccccccC
Confidence            98763  3345566777776544

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.84  E-value=4.6e-22  Score=136.77  Aligned_cols=86  Identities=29%  Similarity=0.476  Sum_probs=73.8

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEEC------------------CCCeEEeCCcccCCH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID------------------PEGVVRTKDRMFESV   61 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~------------------~~~~~~~~~~~F~sl   61 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++||+|..                  .++.|.++...|+||
T Consensus        18 isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~sl   97 (304)
T 2eyz_A           18 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSL   97 (304)
T ss_dssp             CCSSHHHHTTTTCCSSCEECCSCCSSSSCCEEEECSSSSCEEEECCCCSSCCSSCCCCCCCSSSSSCCCCCBTTBCCSCH
T ss_pred             CCHHHHHHHhcCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEeeccccccccccccccccccCCCeEEeCCcEECCH
Confidence            78999655554 37999999999998999999999999999999964                  457888888999999


Q ss_pred             HHHHHHHhhCCcCccccCcceEEcCccccCC
Q psy8455          62 SHLVNYHCQNQLPIISAESALILRNPVAKCA   92 (101)
Q Consensus        62 ~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~~~   92 (101)
                      .+||+||+.+.+.      .+.|+.||+++.
T Consensus        98 ~~LV~~y~~~~l~------~~~L~~P~~~~~  122 (304)
T 2eyz_A           98 PALLEFYKIHYLD------TTTLIEPVSRSR  122 (304)
T ss_dssp             HHHHTTTTTSCCS------SSSSCCBCCSCS
T ss_pred             HHHHHHhhhCccc------cceecccccccc
Confidence            9999999998763      367999998865

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.5e-20  Score=138.77  Aligned_cols=87  Identities=21%  Similarity=0.256  Sum_probs=74.3

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEe-CCcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRT-KDRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+   .++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+ ++..|.||.+||+||+.++.++
T Consensus        15 i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~~~~~~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~~y~~~~~~l   94 (613)
T 2ozo_A           15 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGL   94 (613)
T ss_dssp             CCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTSCCTTS
T ss_pred             CCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcEEECCCCCcCCHHHHHHHHhhCCCCC
Confidence            79999766664   3489999999999999999999999999999996 55666666 5689999999999999998765


Q ss_pred             cccCcceEEcCccccCC
Q psy8455          76 ISAESALILRNPVAKCA   92 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~   92 (101)
                      +     +.|..||+++.
T Consensus        95 ~-----~~L~~p~~~~~  106 (613)
T 2ozo_A           95 P-----CNLRKPCNRPS  106 (613)
T ss_dssp             S-----SCCCSBCCCCT
T ss_pred             C-----ccCCccCCCCC
Confidence            3     67999999864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.83  E-value=2.2e-20  Score=138.50  Aligned_cols=87  Identities=22%  Similarity=0.393  Sum_probs=74.8

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEe-CCcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRT-KDRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+.   ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+ ++..|+|+.+||+||+.++.++
T Consensus        20 isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~~y~~~~~~l   99 (635)
T 4fl3_A           20 ITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGL   99 (635)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHHTTCCTTS
T ss_pred             CCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEeCCEEEeEEEEEcCCCCEEeCCCCccCCHHHHHHHHhhCCCCC
Confidence            799997666653   489999999999999999999999999999996 54677777 4589999999999999998765


Q ss_pred             cccCcceEEcCccccCC
Q psy8455          76 ISAESALILRNPVAKCA   92 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~   92 (101)
                           .+.|+.||.++.
T Consensus       100 -----~~~L~~p~~~~~  111 (635)
T 4fl3_A          100 -----VCLLKKPFNRPQ  111 (635)
T ss_dssp             -----SSCCCEECCCCT
T ss_pred             -----eeccCCcCCCcc
Confidence                 378999999864

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.83  E-value=1.4e-20  Score=120.16  Aligned_cols=84  Identities=26%  Similarity=0.339  Sum_probs=69.6

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCe---EEEEEEEC----CC----CeEEeCCcccCCHHHHHH
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGT---KKHLLLID----PE----GVVRTKDRMFESVSHLVN   66 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~---~~h~~I~~----~~----~~~~~~~~~F~sl~~LI~   66 (101)
                      |+|++|++.|..   ++|+||||+| +.+|.|+||++.++.   ++||+|..    .+    |.|.+++..|+|+.+||+
T Consensus        19 isR~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~~~~~~~~~~F~sl~eLv~   97 (174)
T 3qwx_X           19 MSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLN   97 (174)
T ss_dssp             CCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEECCSSSSCEEEEEEEECCCCTTSSSCCCEEETTEEESSHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCCeEEEEec-CCCCCEEEEEEECCCCCceEEEEEEeccCCCCCcccceEEECCeecCcHHHHhh
Confidence            789997666654   3799999999 878999999999998   99999954    23    478888899999999999


Q ss_pred             HHhhCCcCccccCcceEEcCccccC
Q psy8455          67 YHCQNQLPIISAESALILRNPVAKC   91 (101)
Q Consensus        67 ~y~~~~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      ||+.+++.      .+.|..||+++
T Consensus        98 ~y~~~~~~------~~~L~~P~~~p  116 (174)
T 3qwx_X           98 HFKMRVLT------EASLLAAYKKP  116 (174)
T ss_dssp             HTTSSCSS------SCCCCEECCCC
T ss_pred             hhhcCccc------ccccccccccc
Confidence            99988752      24588888764

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.83  E-value=2.9e-20  Score=135.66  Aligned_cols=93  Identities=19%  Similarity=0.320  Sum_probs=78.6

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++.++.++||+|...+|+|.+ ++..|+||.+||+||+.++.++..
T Consensus         9 i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~~~~~~l~~   88 (532)
T 2b3o_A            9 LSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQD   88 (532)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSSSEEEEEEEETTEEEEEEEECSSSCEEETTSCEESCHHHHHHHHHTTCSCBCC
T ss_pred             CCHHHHHHHHHhcCCCCCEEEecCCCCCCceEEEEEECCEEEEEEEEecCCEEEECCCcccCCHHHHHHHHHhccccccc
Confidence            789997665553  69999999999989999999999999999999876778877 468999999999999999866643


Q ss_pred             -cCcceEEcCccccCCC
Q psy8455          78 -AESALILRNPVAKCAT   93 (101)
Q Consensus        78 -~~~~~~L~~Pv~~~~~   93 (101)
                       .+..+.|+.||+++++
T Consensus        89 ~~g~~~~L~~P~~~~~p  105 (532)
T 2b3o_A           89 RDGTIIHLKYPLNCSDP  105 (532)
T ss_dssp             SSSCCBCCCEECCCCCG
T ss_pred             ccCchhhcccccccccc
Confidence             3566789999987654

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.71  E-value=6e-22  Score=136.13  Aligned_cols=86  Identities=24%  Similarity=0.412  Sum_probs=73.8

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. ..+|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++..|+||.+||+||+.+.+     
T Consensus        19 isR~~Ae~lL~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~Lv~~y~~~~~-----   93 (303)
T 2lqn_A           19 VSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYL-----   93 (303)
Confidence            78999655554 3599999999998899999999999999999997 4677888888999999999999999876     


Q ss_pred             CcceEEcCccccCC
Q psy8455          79 ESALILRNPVAKCA   92 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~   92 (101)
                       ..+.|+.||.++.
T Consensus        94 -~~~~L~~P~~r~~  106 (303)
T 2lqn_A           94 -DTTTLIEPAPRYP  106 (303)
Confidence             2378999999854

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.82  E-value=4.7e-20  Score=136.75  Aligned_cols=85  Identities=22%  Similarity=0.347  Sum_probs=72.9

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+.   ++|+||||+| +.+|.|+||++.++.++||+|. ..+|.|.+++ ..|+||.+||+||+.++.++
T Consensus       173 isr~~ae~~L~~~~~~~G~FLvR~s-~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv~~y~~~~~~l  251 (635)
T 4fl3_A          173 ISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGL  251 (635)
T ss_dssp             CCHHHHHHHHHSSSCCTTCEEEEES-SSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHHTTCCTTS
T ss_pred             CCHHHHHHHHHcCCCCCceEEEEec-CCCCCEEEEEEECCEEEEEEEEECCCCCEEeCCCCccCCHHHHHHHhhhCCCCC
Confidence            799997666653   4899999999 5689999999999999999995 6678888865 89999999999999999877


Q ss_pred             cccCcceEEcCccccC
Q psy8455          76 ISAESALILRNPVAKC   91 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~   91 (101)
                      +     +.|..||++.
T Consensus       252 ~-----~~L~~p~~~~  262 (635)
T 4fl3_A          252 L-----RVLTVPCQKI  262 (635)
T ss_dssp             S-----SCCCSBCCC-
T ss_pred             c-----cccCccCcCc
Confidence            5     5799999874

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.81  E-value=1.4e-19  Score=131.84  Aligned_cols=93  Identities=18%  Similarity=0.343  Sum_probs=77.9

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|..  .+|+||||+|++.+|.|+||++.++.++||+|...++.|.+. +..|+||.+||+||+.++.++..
T Consensus        11 i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLv~~y~~~~~~l~~   90 (525)
T 2shp_A           11 ITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKE   90 (525)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHTCTTCSBS
T ss_pred             CCHHHHHHHHHhCCCCCcEEeeccCCCCCcEEEEEEECCEEEEEEEEecCCeEEECCCCeECCHHHHHHHHHhCCccccc
Confidence            789997666654  599999999999899999999999999999998666777664 58999999999999999877632


Q ss_pred             -cCcceEEcCccccCCC
Q psy8455          78 -AESALILRNPVAKCAT   93 (101)
Q Consensus        78 -~~~~~~L~~Pv~~~~~   93 (101)
                       .+..+.|+.||+++++
T Consensus        91 ~~g~~i~L~~Pv~~~dp  107 (525)
T 2shp_A           91 KNGDVIELKYPLNCADP  107 (525)
T ss_dssp             SSSCBCCCCEECCCCCC
T ss_pred             ccccccccccccccccc
Confidence             2446789999987654

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.80  E-value=3.5e-19  Score=131.46  Aligned_cols=93  Identities=19%  Similarity=0.319  Sum_probs=76.3

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|+.  .+|+||||+|++.+|.|+||++.++.++||+|...++.|.+ ++..|+||.+||+||+.+++++..
T Consensus         9 isr~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv~~y~~~~~~l~~   88 (595)
T 3ps5_A            9 LSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQD   88 (595)
T ss_dssp             CCHHHHHHHHHHHCCTTCEEEEECSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHTTSSCCBC
T ss_pred             CCHHHHHHHHhhCCCCCEEEEeecCCCCCceEEEEEECCEEEEEEEEeCCCcEEEecCccccchhhhhhhhccCcccccc
Confidence            789997665542  69999999999999999999999999999999855666654 568999999999999999887743


Q ss_pred             c-CcceEEcCccccCCC
Q psy8455          78 A-ESALILRNPVAKCAT   93 (101)
Q Consensus        78 ~-~~~~~L~~Pv~~~~~   93 (101)
                      . +..+.|..|+++..+
T Consensus        89 ~~g~~i~L~~P~~~~~p  105 (595)
T 3ps5_A           89 RDGTIIHLKYPLNCSDP  105 (595)
T ss_dssp             SSCCBCCCCCBCCCCCS
T ss_pred             ccccccccccccccccc
Confidence            2 445678888886554

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.80  E-value=2.4e-19  Score=132.36  Aligned_cols=85  Identities=25%  Similarity=0.342  Sum_probs=72.3

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+.   ++|+||||+| +.+|.|+|||+.++.++||+|. ..+|.|.+. +..|+||.+||+||+.++.++
T Consensus       168 i~r~~ae~~L~~~~~~~G~FLvR~s-~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~~y~~~~~~l  246 (613)
T 2ozo_A          168 LTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGL  246 (613)
T ss_dssp             CCHHHHHHHHSSSCCCTTCEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHHHHHHHHCCTTC
T ss_pred             CCHHHHHHHHhhcCCCCceEEEEec-CCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHHHHHHhhCCCCc
Confidence            789997776663   5999999999 5689999999999999999996 567877776 689999999999999998877


Q ss_pred             cccCcceEEcCccccC
Q psy8455          76 ISAESALILRNPVAKC   91 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~   91 (101)
                      +     +.|..||+..
T Consensus       247 ~-----~~L~~pC~~~  257 (613)
T 2ozo_A          247 I-----YCLKEACPNS  257 (613)
T ss_dssp             S-----SCCCSBCCC-
T ss_pred             e-----eccccccccc
Confidence            4     5788888764

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.79  E-value=2.4e-19  Score=123.32  Aligned_cols=84  Identities=27%  Similarity=0.366  Sum_probs=70.3

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCe---EEEEEEEC--CC------CeEEeCCcccCCHHHHHH
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGT---KKHLLLID--PE------GVVRTKDRMFESVSHLVN   66 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~---~~h~~I~~--~~------~~~~~~~~~F~sl~~LI~   66 (101)
                      |+|++|++.|+.   ++|+||||+| +.+|.|+|||+.+++   ++||+|+.  .+      |.|.+++..|+|+.+||+
T Consensus        48 i~R~~Ae~lL~~~~~~~G~FLVR~S-~~~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~g~~~~~~~~F~Sl~eLv~  126 (308)
T 3qwy_A           48 MSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLN  126 (308)
T ss_dssp             CCHHHHHHHHHSTTCCTTEEEEEEC-SSTTCEEEEEECCSSSSCEEEEEEEECCCCTTTTCCCCEEETTEEESSHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCceEEEEcc-CCCCCEEEEEEeCCCCCceEEEEEeeccCCCcCcccceEEEeCeeeCCHHHHHH
Confidence            799997666654   3899999999 889999999999999   99999954  22      788888899999999999


Q ss_pred             HHhhCCcCccccCcceEEcCccccC
Q psy8455          67 YHCQNQLPIISAESALILRNPVAKC   91 (101)
Q Consensus        67 ~y~~~~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      ||+.+.+.      .+.|..|+.++
T Consensus       127 ~y~~~~~~------~~~L~~P~~~p  145 (308)
T 3qwy_A          127 HFKMRVLT------EASLLAAYKKP  145 (308)
T ss_dssp             HHHHSCSS------SCCCCEECCCC
T ss_pred             HHhhcccc------cchhccccccc
Confidence            99998863      24578888764

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.78  E-value=1.9e-19  Score=132.96  Aligned_cols=91  Identities=23%  Similarity=0.308  Sum_probs=75.1

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCCCCCCEEEEEEeCC---------eEEEEEEECCCCeEEeCC-cccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQGSPGQYVLTGYQGG---------TKKHLLLIDPEGVVRTKD-RMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~~~g~~~Lsv~~~~---------~~~h~~I~~~~~~~~~~~-~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|+  ..+|+||||+|++.+|.|+|||++.+         .++||+|...+|.|.+.+ ..|+||.+||+||
T Consensus       115 ~~r~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y  194 (595)
T 3ps5_A          115 MSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHF  194 (595)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCBBSSSSCCBSSHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEEeCCEEEEcCCcCCCCHHHHHHHH
Confidence            68999766554  35899999999999999999999987         899999986566666654 7999999999999


Q ss_pred             hhCCcCccccCcceEEcCccccCC
Q psy8455          69 CQNQLPIISAESALILRNPVAKCA   92 (101)
Q Consensus        69 ~~~~~~l~~~~~~~~L~~Pv~~~~   92 (101)
                      +.++++.. .+..+.|+.|+....
T Consensus       195 ~~~~l~~~-~g~~~~L~~p~~~t~  217 (595)
T 3ps5_A          195 KKTGIEEA-SGAFVYLRQPYYATR  217 (595)
T ss_dssp             HHSCBCCT-TSCCBCCCEECCCCC
T ss_pred             hcCCcccc-CCcEEEeeccccccc
Confidence            99888663 456678999997543

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.77  E-value=2.1e-18  Score=125.71  Aligned_cols=92  Identities=26%  Similarity=0.393  Sum_probs=76.9

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCC----------eEEEEEEECCCCeEEeC-CcccCCHHHHHHH
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGG----------TKKHLLLIDPEGVVRTK-DRMFESVSHLVNY   67 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~----------~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~   67 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++..+          .++|++|...+|.|.++ ...|+||.+||+|
T Consensus       117 ~~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~~~~F~sL~eLV~~  196 (525)
T 2shp_A          117 LSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEH  196 (525)
T ss_dssp             CCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCceEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEecCCeEEECCCceeCcHHHHHHh
Confidence            689996666553  6899999999999999999999987          89999997557778776 5799999999999


Q ss_pred             HhhCCcCccccCcceEEcCccccCCC
Q psy8455          68 HCQNQLPIISAESALILRNPVAKCAT   93 (101)
Q Consensus        68 y~~~~~~l~~~~~~~~L~~Pv~~~~~   93 (101)
                      |+.+++.. ..+..+.|+.||++...
T Consensus       197 y~~~~l~~-~~g~~~~L~~P~~~t~i  221 (525)
T 2shp_A          197 YKKNPMVE-TLGTVLQLKQPLNTTRI  221 (525)
T ss_dssp             HHHSCCBC-TTSCBCCCCEECCCSCE
T ss_pred             hhccCccc-cCCeEEEeecccccccc
Confidence            99998755 34566789999987643

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.74  E-value=3.7e-18  Score=124.56  Aligned_cols=92  Identities=23%  Similarity=0.298  Sum_probs=74.9

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCC---------eEEEEEEECCCCeEEeC-CcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGG---------TKKHLLLIDPEGVVRTK-DRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~---------~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++..+         .++|++|...+|.|.++ ...|+||.+||+||
T Consensus       115 i~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~~g~~~l~~~~~F~sl~eLV~~y  194 (532)
T 2b3o_A          115 MSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHF  194 (532)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEEC----CCEEEEEEEEBCCTTSBBSSSSCCBSSHHHHHHHH
T ss_pred             cchHHHHHHHhcCCCCceEEEecCCCCCCceEEEEEecCccccccCCCceEEEEEEEcCCceeeCCCcccCcHHHHHhhc
Confidence            689996665542  6899999999999999999999877         89999998667777776 57999999999999


Q ss_pred             hhCCcCccccCcceEEcCccccCCC
Q psy8455          69 CQNQLPIISAESALILRNPVAKCAT   93 (101)
Q Consensus        69 ~~~~~~l~~~~~~~~L~~Pv~~~~~   93 (101)
                      +.+++.. ..+..+.|+.||+++..
T Consensus       195 ~~~~l~~-~~g~~~~L~~P~~~t~i  218 (532)
T 2b3o_A          195 KKTGIEE-ASGAFVYLRQPYYATRV  218 (532)
T ss_dssp             HHHCEEC-SSSCEECCCEECCCCCC
T ss_pred             cccCccc-cCCeeEecccccccccc
Confidence            9987643 23456788999987653

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.72  E-value=1.6e-17  Score=119.61  Aligned_cols=70  Identities=30%  Similarity=0.456  Sum_probs=61.7

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHH-----HHhhC
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVN-----YHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~-----~y~~~   71 (101)
                      |+|++|++.|..++|+||||+|++.+|.|+||++.++.++||+|.. +|.|.+++..|+||.|||+     +|+..
T Consensus        58 i~r~~ae~lL~~~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~-~g~~~~~~~~F~sl~~Lv~dGl~~~~~~~  132 (463)
T 3cxl_A           58 ISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYY-DGKHFVGEKRFESIHDLVTDGLITLYIET  132 (463)
T ss_dssp             CCHHHHHHHHTTSTTEEEEEECSSSTTCEEEEEECSSSEEEEECEE-SSSEESSSCCBSCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHcCCCCeEEEeccCCCCCCEEEEEEECCEEEEEEEec-CCeEEECCCccCCHHHHHHHHHHhhhccC
Confidence            7899976655456999999999999999999999999999999976 6778888899999999999     98654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.71  E-value=4.1e-18  Score=118.92  Aligned_cols=87  Identities=30%  Similarity=0.490  Sum_probs=55.9

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCccccCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAES   80 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~   80 (101)
                      |+|++|++ ||.++|+||||+|++.+ .|+|||++++.++||+|...++.|.+++..|+|+++||+||+.++.++. ...
T Consensus        20 i~r~~a~~-lL~~~G~flvR~s~~~~-~~~lsv~~~~~~~h~~i~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~-~~~   96 (377)
T 3cbl_A           20 IPRAEVAE-LLVHSGDFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLT-KKS   96 (377)
T ss_dssp             CCHHHHHH-HCCSTTEEEEEECC--C-CEEEEC-----CCEEEC----CCCCC----CCSHHHHHHHHHHHTCCC-----
T ss_pred             CCHHHHHH-HHhcCCCEEEEEeCCCC-cEEEEEEECCCccchhhccccceEEecceeccchHHHHHHHhhccCCcc-ccc
Confidence            78999554 66689999999999877 8999999999999999986667888888999999999999998877662 223


Q ss_pred             ceEEcCcccc
Q psy8455          81 ALILRNPVAK   90 (101)
Q Consensus        81 ~~~L~~Pv~~   90 (101)
                      ...+..|+++
T Consensus        97 ~~~~~~~~~~  106 (377)
T 3cbl_A           97 GVVLHRAVPK  106 (377)
T ss_dssp             -CCCCEECCC
T ss_pred             CcccccCccc
Confidence            3445555543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.67  E-value=5.1e-16  Score=111.98  Aligned_cols=86  Identities=30%  Similarity=0.396  Sum_probs=68.2

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|+..|. ..+|+||||+|+..+|.|+||++.++.++||+|. ..+|.|.+. ...|.++.+||+||.....++. 
T Consensus       112 i~r~~ae~ll~~~~~G~fLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~eLv~~~~~~~~g~~-  190 (495)
T 1opk_A          112 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLI-  190 (495)
T ss_dssp             CCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTCCTTSS-
T ss_pred             CCHHHHHHHhhCCCCceEEEEeCCCCCCceEEEEeeCCeEEEEEEEecCCCceEeccCccchhHHHHhhhhcccccccc-
Confidence            78999554443 2599999999999899999999999999999996 456666654 5799999999999988776553 


Q ss_pred             cCcceEEcCccccC
Q psy8455          78 AESALILRNPVAKC   91 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~   91 (101)
                          ..|..|+++.
T Consensus       191 ----~~l~~~~~~~  200 (495)
T 1opk_A          191 ----TTLHYPAPKR  200 (495)
T ss_dssp             ----SCCCEECCCC
T ss_pred             ----hhcccccccc
Confidence                3455666543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.66  E-value=3.1e-16  Score=111.92  Aligned_cols=76  Identities=26%  Similarity=0.351  Sum_probs=63.0

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+.   .+|+||||.|+..+|.|+|||+.     .+.++||+|. ..+|.|.+. ...|.|+.+||+||+.
T Consensus        72 ~~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~Li~~y~~  151 (452)
T 1fmk_A           72 ITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSK  151 (452)
T ss_dssp             CCHHHHHHHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHHHHHTT
T ss_pred             ccHHHHHHHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHHHHHHhhh
Confidence            689997666653   46999999999989999999997     5689999996 455656654 5899999999999998


Q ss_pred             CCcCcc
Q psy8455          71 NQLPII   76 (101)
Q Consensus        71 ~~~~l~   76 (101)
                      ...+++
T Consensus       152 ~~~~l~  157 (452)
T 1fmk_A          152 HADGLC  157 (452)
T ss_dssp             CCTTSS
T ss_pred             ccccch
Confidence            887664

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.66  E-value=1.1e-15  Score=100.09  Aligned_cols=74  Identities=31%  Similarity=0.524  Sum_probs=64.4

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcC
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLP   74 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~   74 (101)
                      |+|++|++.|.  .++|+||||.|++.+|.|+||++..+.++||+|. ..+|.|.+....|+|+.+||+||+.+++.
T Consensus        65 isr~~ae~lL~~~~~~G~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~~~~f~sl~eLv~~~~~~~~~  141 (217)
T 1gri_A           65 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS  141 (217)
T ss_dssp             CCHHHHHHHHHTCSSTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESSSCEESSHHHHHHHHHHSCSS
T ss_pred             CCHHHHHHHHhccCCCceEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeeeEcCCHHHHHHhhhccccc
Confidence            68999666553  4699999999999999999999999999999996 56778888889999999999999988753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.63  E-value=1.3e-15  Score=110.78  Aligned_cols=76  Identities=28%  Similarity=0.357  Sum_probs=62.0

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCe-EEeCCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGV-VRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~-~~~~~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+.   .+|+||||+|+..+|.|+|||+.     .+.++||+|+ ..+|. |......|.|+.+||+||+.
T Consensus       155 i~r~~ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~eLv~~y~~  234 (535)
T 2h8h_A          155 ITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSK  234 (535)
T ss_dssp             CCHHHHHHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHHHHHHHHH
T ss_pred             cCHHHHHHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHHhheeecc
Confidence            789996666653   46999999999989999999996     4689999996 34554 44456899999999999999


Q ss_pred             CCcCcc
Q psy8455          71 NQLPII   76 (101)
Q Consensus        71 ~~~~l~   76 (101)
                      +..+++
T Consensus       235 ~~~~~~  240 (535)
T 2h8h_A          235 HADGLC  240 (535)
T ss_dssp             CCTTSS
T ss_pred             ccCccc
Confidence            887664

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.62  E-value=2.3e-15  Score=107.31  Aligned_cols=76  Identities=24%  Similarity=0.326  Sum_probs=64.3

Q ss_pred             CChHHHHhcccC-CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCcc
Q psy8455           1 MSRIAKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPII   76 (101)
Q Consensus         1 isR~~a~~~Ll~-~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~   76 (101)
                      |+|++|++.|.. .+|+||||+|++.+|.|+||++.++.++||+|...++.|.+. ...|.++.+||+||.....+++
T Consensus        87 i~r~~ae~~L~~~~~G~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~i~~~~~F~sl~eLv~~y~~~~~~~~  164 (450)
T 1k9a_A           87 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLC  164 (450)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHHHCCTTSS
T ss_pred             cCHHHhhhhhccCCCceEEEEecCCCCCceEEEEEeCCeeeEEEEEecCCceEeccccccccHHHHHhhhcccccchh
Confidence            789996666653 589999999999999999999999999999997555656654 5899999999999998887663

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.58  E-value=6.5e-15  Score=105.05  Aligned_cols=76  Identities=22%  Similarity=0.274  Sum_probs=63.2

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEe-CCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRT-KDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~-~~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+.   .+|+||||+|+..+|.|+||++.     ++.++||+|. ..+|.|.+ ....|.++.+||+||+.
T Consensus        77 i~r~~ae~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLv~~y~~  156 (454)
T 1qcf_A           77 ISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKK  156 (454)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTS
T ss_pred             cchhhhhhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHHHHHHHHHh
Confidence            789997766653   68999999999989999999998     6789999996 45565555 45799999999999998


Q ss_pred             CCcCcc
Q psy8455          71 NQLPII   76 (101)
Q Consensus        71 ~~~~l~   76 (101)
                      ...+++
T Consensus       157 ~~~~l~  162 (454)
T 1qcf_A          157 GNDGLC  162 (454)
T ss_dssp             SCTTSS
T ss_pred             ccCCcc
Confidence            876663

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.54  E-value=3.1e-14  Score=91.24  Aligned_cols=69  Identities=14%  Similarity=0.245  Sum_probs=60.0

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEe-CCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQ-GGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~-~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      +++.||++.|..++|+||||.|.. ++.++|+++. ++.+.|+.|...+..|.+++..|++|.|||.+|..
T Consensus        20 ~s~~qAe~~L~~~~G~~liRPSsk-~~~ltit~Kv~d~~~~Hi~I~E~~k~l~ig~~~fedLDElI~~yv~   89 (178)
T 2xp1_A           20 FNVTESENYLRSSTDDFLIRKGSR-HGYCVLVIKFASDVFVHMKIEEHSEHYTCSNKHFEDIDEVISVYVR   89 (178)
T ss_dssp             CCHHHHHHHHHHSSCCEEEEECSS-TTEEEEEEEEETTEEEEEEEEECSSCEEETTEEESSHHHHHHHTHH
T ss_pred             CCHHHHHHHHhcCCCCEEEeecCC-CCcEEEEEEECCCcEEEEEEEECCCEEEECCcEECCHHHHHHHHHH
Confidence            578997777776789999999998 7789999995 88999999985555788898999999999999976

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.48  E-value=2.8e-15  Score=105.45  Aligned_cols=63  Identities=27%  Similarity=0.415  Sum_probs=0.0

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHL   64 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~L   64 (101)
                      |+|++|++.|. ..+|+||||+| +.+|.|+|||+.++.|+||+|. ..+|+|.++. ..|+||.+|
T Consensus       308 isR~~AE~LL~~~~~G~FLVR~S-s~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~SL~eL  373 (373)
T 3hhm_B          308 SNRNKAENLLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL  373 (373)
T ss_dssp             -------------------------------------------------------------------
T ss_pred             CCHHHHHHHhccCCCCcEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCcEEeCCCCCCCChhhC
Confidence            78999655443 35999999999 7789999999999999999996 5567777765 899999986

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=98.28  E-value=2.4e-06  Score=54.53  Aligned_cols=66  Identities=15%  Similarity=0.180  Sum_probs=47.9

Q ss_pred             ChHHHHhccc-CCCCc---EEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhh
Q psy8455           2 SRIAKTAFPS-RQDGD---FLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         2 sR~~a~~~Ll-~~~G~---FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      ++++ +|.+| ..++.   |.++.+...||.|+|++. .+.++|-.|.-..| |.+.+..|+||.+||+||++
T Consensus       107 s~~~-~e~~L~~~~p~~~~Y~f~~s~~~PG~f~l~~~-~~~~~~e~i~V~~g-~~~~~~~f~sl~~L~~~fK~  176 (178)
T 2xp1_A          107 SPED-AEKLLSSFDGSKVVYAFYFSRKYPGKLTFAYN-NGSILEEYIGVSDM-LTYNNSTFKDIDSFVAYRKR  176 (178)
T ss_dssp             CTTT-SHHHHHTCCSSSCEEEEEECSSSTTEEEEEEE-SSSEEEEEEEESSS-EEETTEEESSHHHHHHHHHC
T ss_pred             CHHH-HHHHHHHhCCCCceEEEEecCCCCCeEEEEEc-CCCCceeeEEEccC-CEEcCcCCcCHHHHHHHHhh
Confidence            3455 45555 33333   999999999999999987 66666655531245 55688999999999999975

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=98.19  E-value=3.2e-06  Score=60.94  Aligned_cols=63  Identities=21%  Similarity=0.313  Sum_probs=47.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeC---CeEEEEEEECCCCeEEeCCcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQG---GTKKHLLLIDPEGVVRTKDRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~---~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|. +.+|+||+|-|++.+|.|++++...   +.++|+.|.-.+..     ..-.|++|+|..|
T Consensus       358 Isk~ea~~lL~~~~~GTFLLRFSeS~~GgitIsyV~~d~~~~~kh~~v~p~t~~-----ls~~SL~D~I~d~  424 (473)
T 1uur_A          358 MGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA-----AAKKTFPDFLSEH  424 (473)
T ss_dssp             CCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGSB-----TTTBCHHHHHTTC
T ss_pred             ecHHHHHHHhhCCCCCeEEEEeccCCCceEEEEEEeecCCCceeEEEecCCccc-----cccCCHHHHHhcc
Confidence            78999666555 3689999999999999999999874   68999988621221     2347788888765

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=97.36  E-value=0.0003  Score=52.90  Aligned_cols=66  Identities=18%  Similarity=0.196  Sum_probs=44.4

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCC-CCCCEEEEEEeC---C-eEEEEEEECCCCeEEeCCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQG-SPGQYVLTGYQG---G-TKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~-~~g~~~Lsv~~~---~-~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|.+.|. +.+|+||+|-|++ ..|.+++++...   + .+.++.|.    -|...+-.=.|++|.|..|+.
T Consensus       582 IsK~~a~~lL~~~~~GTFLLRFSdS~~~Ggitia~V~~~~~~~~~~v~~v~----P~t~kdl~~~sl~d~i~d~~~  653 (683)
T 1yvl_A          582 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVE----PYTKKELSAVTFPDIIRNYKV  653 (683)
T ss_dssp             CCHHHHHHHHSSSCSSCEEEEECSSCSSCEEEEEEEECCC---CCEEEEBC----CEEHHHHTTSCHHHHHHHCCE
T ss_pred             ecHHHHHHHHhCCCCCeEEEecCCCCCCCceEEEEEeccCCCccceEEecC----CCchHhhhhCCHHHHhhchhh
Confidence            68999666555 4699999999999 899888888763   2 33333332    233222233788999988853

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=97.28  E-value=0.00026  Score=52.38  Aligned_cols=64  Identities=17%  Similarity=0.180  Sum_probs=42.5

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCe-EEEEEEECCCCeEEeCCcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGT-KKHLLLIDPEGVVRTKDRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~-~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|. ..+|+||+|-|++..|.|++++..... .+++.|.    -|...+-.-.|++|+|..|
T Consensus       471 isk~~a~~~L~~~~~GtFLlRFSds~~G~~tisyv~~~~~~~v~~v~----P~t~kdl~~~sL~d~I~d~  536 (585)
T 1y1u_A          471 VNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSPDRNLWNLK----PFTTRDFSIRSLADRLGDL  536 (585)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEEETTSTTEEEEEECCSSCCSSCSEEE----EECHHHHHHSCHHHHHHHC
T ss_pred             ccHHHHHHHHhCCCCCceEEEeccCCcCcEEEEEEecCCCceeEeec----CCchhhcccCCHHHHHhcc
Confidence            68999655555 469999999999999999999977422 2222232    1111122447888988776

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=97.12  E-value=3.7e-05  Score=56.91  Aligned_cols=64  Identities=16%  Similarity=0.109  Sum_probs=42.9

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCC-CCCCEEEEEEeC---CeEEEEEEECCCCeEEeCCcccCCHHHHHHHHh
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQG-SPGQYVLTGYQG---GTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHC   69 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~-~~g~~~Lsv~~~---~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~   69 (101)
                      |+|++| +.||  ..+|+||+|-|++ ..|.++++....   |.+.|+.|.-    |....-.-.|++|+|..|+
T Consensus       463 isk~~a-~~lL~~~~~GTFLlRFSes~~~Ggitis~v~~~~~g~~~~~~v~P----~t~~~l~~~sLad~I~d~~  532 (596)
T 1bg1_A          463 ISKERE-RAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP----YTKQQLNNMSFAEIIMGYK  532 (596)
T ss_dssp             CCTTGG-GTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCCC----BCGGGGTSSCHHHHTTSCC
T ss_pred             ecHHHH-HHHHhCCCCCeeEEeecCCCCCCcEEEEEEecCCCCceeEEecCC----CchhhhccCCHHHHHHhhh
Confidence            689995 5555  4699999999998 889899988763   3444554431    2112223458899996653

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=96.82  E-value=0.00018  Score=57.10  Aligned_cols=70  Identities=17%  Similarity=0.309  Sum_probs=0.0

Q ss_pred             ChHHHHhcccC-CCCcEEEEeeCCCCCCEEEEEEe-CCeEEEEEEE--CCC-----C-eEEeCCcccCCHHHHHHHHhhC
Q psy8455           2 SRIAKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQ-GGTKKHLLLI--DPE-----G-VVRTKDRMFESVSHLVNYHCQN   71 (101)
Q Consensus         2 sR~~a~~~Ll~-~~G~FLvR~s~~~~g~~~Lsv~~-~~~~~h~~I~--~~~-----~-~~~~~~~~F~sl~~LI~~y~~~   71 (101)
                      +-.+|++.|-. ..|+++||.|+..+..-+++++. ++...|+-|.  ...     | .+.+++..|.+|.|||.-|...
T Consensus      1031 ~~~qAe~~L~~~~~Gd~vIRPSSkG~dhLtvTwKv~d~vyqHidV~E~~K~n~~slG~~L~I~~~~y~DLDEli~r~V~p 1110 (1219)
T 3psi_A         1031 NGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVLIVDNQKYNDLDQIIVEYLQN 1110 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CHHHHHHHHhcCCCCCEEEeecCCCCCceEEEEEEcCCcEEEEEEEecCCccccccCceEEECCceECCHHHHHHHHHHH
Confidence            44676666654 47999999998866666777776 5778899885  211     2 4566778999999999888553

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=96.77  E-value=0.0028  Score=43.61  Aligned_cols=38  Identities=16%  Similarity=0.163  Sum_probs=30.1

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ||=+||.+.|-   +++|+|++|-|++.+|.|+++.....+
T Consensus       250 lTydEv~~~L~~~~~kpGsYIfR~ScTrlGqwAIgyV~~~~  290 (329)
T 3bux_B          250 LTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADG  290 (329)
T ss_dssp             CCHHHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEECTTS
T ss_pred             eeHHHHHHHHHHhcCCCCcEEEEeccCccCceEEEEECCCC
Confidence            45577666665   369999999999999999999877533

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=96.60  E-value=0.0019  Score=47.78  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=41.6

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCC-CCCCEEEEEEeC---C-eEEEEEEECCCCeEEeCCcccCCHHHHHHHHh
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQG-SPGQYVLTGYQG---G-TKKHLLLIDPEGVVRTKDRMFESVSHLVNYHC   69 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~-~~g~~~Lsv~~~---~-~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~   69 (101)
                      |++++|.+.|. +.+|+||+|-|++ ..|..++++...   + .+.+..|.-    |...+-.=.|++|.|..|.
T Consensus       447 IsK~~a~~lL~~~~~GTFLLRFSdS~~~GgITia~V~~~~~~~~~~v~~v~P----~T~kdl~~~sL~d~i~d~~  517 (575)
T 1bf5_A          447 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEP----YTKKELSAVTFPDIIRNYK  517 (575)
T ss_dssp             CCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSSSCCCCEECCC----BCHHHHHSSCHHHHHHTCC
T ss_pred             ecHHHHHHHHhCCCCCeEEEecCCCCCCCcEEEEEEecCCCCccceeEecCC----CchhhhhhCCHHHHhhcch
Confidence            68999655554 4689999999998 889888888663   2 333333321    1111112257888887774

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=96.47  E-value=0.006  Score=41.77  Aligned_cols=41  Identities=15%  Similarity=0.193  Sum_probs=31.3

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeC-CeEEE
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQG-GTKKH   41 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~-~~~~h   41 (101)
                      ||=+||.+.|-   +++|+|++|-|++.+|.|+++.... +.+.|
T Consensus       235 lTydEV~~~L~~~~~KpGsYIfR~ScTrlGqwAIgYV~s~g~I~q  279 (323)
T 3op0_A          235 LTYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGYVSSDGSILQ  279 (323)
T ss_dssp             CCHHHHHHHTTGGGGSTTEEEEEECSSSTTCEEEEEECTTSCEEE
T ss_pred             eeHHHHHHHHHHhccCCCcEEEEeccCccCceEEEEEcCCCceee
Confidence            45577666655   3699999999999999999998774 44443

>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A

Probab=89.72  E-value=0.49  Score=26.36  Aligned_cols=27  Identities=26%  Similarity=0.315  Sum_probs=23.1

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        53 ~~dGty~v~Y~p~~~G~y~I~V~~~g~   79 (94)
T 2w0p_A           53 RKDGSCGVAYVVQEPGDYEVSVKFNEE   79 (94)
T ss_dssp             CTTSCEEEEEECSSCEEEEEEEEETTE
T ss_pred             CCCCEEEEEEEECCCceEEEEEEECCE
Confidence            468999999888888999999998763

>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=88.92  E-value=0.62  Score=26.89  Aligned_cols=27  Identities=22%  Similarity=0.309  Sum_probs=23.2

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        61 ~~dGty~v~Y~p~~~G~y~I~V~~~g~   87 (111)
T 2di8_A           61 LEDGTCKVSYFPTVPGVYIVSTKFADE   87 (111)
T ss_dssp             CTTSCEEEEECCCSCSEEEEEEEESSC
T ss_pred             CCCCEEEEEEEeCCCeEEEEEEEECCE
Confidence            468999999888889999999998653

>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A

Probab=88.77  E-value=0.56  Score=26.23  Aligned_cols=26  Identities=27%  Similarity=0.259  Sum_probs=22.6

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|.|++++
T Consensus        56 ~~dGty~v~Y~p~~~G~y~i~V~~~g   81 (97)
T 2bp3_A           56 NQDGTCSVSYLPVLPGDYSILVKYNE   81 (97)
T ss_dssp             CSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred             CCCCEEEEEEEeCCCCcEEEEEEECC
Confidence            46899999988888899999999876

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=88.77  E-value=0.081  Score=42.45  Aligned_cols=56  Identities=14%  Similarity=0.043  Sum_probs=0.0

Q ss_pred             cEEEEeeCCCCCCEEEEEEe--CCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCC
Q psy8455          16 DFLVRESQGSPGQYVLTGYQ--GGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQ   72 (101)
Q Consensus        16 ~FLvR~s~~~~g~~~Lsv~~--~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~   72 (101)
                      .|.+..+...||.|.|++..  +..++|.-|. .++| |.+.+..|+++.+|+.+++.+-
T Consensus      1148 ~Y~f~~~~~~PG~F~L~f~~~~~~~~~~~~v~v~p~G-f~~r~~~f~~~~~L~~~FK~~~ 1206 (1219)
T 3psi_A         1148 VYYFSLNHDNPGWFYLMFKINANSKLYTWNVKLTNTG-YFLVNYNYPSVIQLCNGFKTLL 1206 (1219)
T ss_dssp             ------------------------------------------------------------
T ss_pred             eEEEEeCCCCCCEEEEEEecCCCCCceeeeEEEccCe-EEEcCccCcCHHHHHHHHHHHh
Confidence            45556677789999999886  3457776665 4556 5566899999999999987753

>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0

Probab=87.87  E-value=0.69  Score=26.11  Aligned_cols=26  Identities=31%  Similarity=0.442  Sum_probs=21.7

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      +.||+|.|+-....+|.|.+.|++++
T Consensus        60 ~~dGty~V~Y~p~~~G~y~i~V~~~g   85 (100)
T 3rgh_A           60 HGDGTHTITYIPLCPGAYTVTIKYGG   85 (100)
T ss_dssp             CSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred             CCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            45899999988887888999998875

>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=87.58  E-value=0.73  Score=26.24  Aligned_cols=27  Identities=26%  Similarity=0.377  Sum_probs=23.0

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      +.+|+|.|+-....+|.|.|.|++++.
T Consensus        61 ~~dGty~v~Y~p~~~G~y~I~V~~~g~   87 (105)
T 2dic_A           61 NKDGSCSAEYIPFAPGDYDVNITYGGA   87 (105)
T ss_dssp             CSSSCEEEEECCSSCEEEEEEEEETTE
T ss_pred             CCCCeEEEEEEeCCCeEEEEEEEECCE
Confidence            468999999888888999999998763

>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.29  E-value=0.94  Score=26.16  Aligned_cols=27  Identities=22%  Similarity=0.284  Sum_probs=23.1

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        71 ~~dGty~v~Y~p~~~G~y~I~V~~~g~   97 (115)
T 2eea_A           71 NKDGTCTVTYLPTLPGDYSILVKYNDK   97 (115)
T ss_dssp             CSSSEEEEEEECSSCSCEEEEEEESSS
T ss_pred             CCCCEEEEEEEeCCCeeEEEEEEECCE
Confidence            468999999888889999999998653

>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A

Probab=87.16  E-value=0.84  Score=25.40  Aligned_cols=27  Identities=19%  Similarity=0.212  Sum_probs=22.3

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        58 ~~dGty~v~Y~p~~~G~y~i~V~~~g~   84 (96)
T 1v05_A           58 MGNRVYNVTYTVKEKGDYILIVKWGDE   84 (96)
T ss_dssp             CSTTEEEEEEECSSCEEEEEEEEETTE
T ss_pred             CCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence            458999999888888899999988763

>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=86.86  E-value=0.85  Score=26.24  Aligned_cols=27  Identities=33%  Similarity=0.487  Sum_probs=22.6

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        63 ~~dGty~v~Y~p~~~G~y~i~V~~~g~   89 (113)
T 2dia_A           63 NKDGTYAVTYVPLTAGMYTLTMKYGGE   89 (113)
T ss_dssp             CTTSEEEEEEECSSCEEEEEEEEETTE
T ss_pred             CCCCEEEEEEEeCCCccEEEEEEECCE
Confidence            468999999888888899999998764

>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}

Probab=86.78  E-value=0.74  Score=26.81  Aligned_cols=26  Identities=27%  Similarity=0.330  Sum_probs=22.5

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|.|++++
T Consensus        68 ~~dGty~v~Y~p~~~G~y~I~V~~~g   93 (119)
T 2k9u_A           68 RKDGSCGVSYVVQEPGDYEVSIKFND   93 (119)
T ss_dssp             CSSSEEEEEEECCSSEEEEEEEEETS
T ss_pred             CCCCEEEEEEEECCCceEEEEEEECC
Confidence            46899999988888899999999865

>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}

Probab=86.44  E-value=0.91  Score=24.88  Aligned_cols=26  Identities=19%  Similarity=0.133  Sum_probs=21.4

Q ss_pred             CCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          13 QDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        13 ~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      .+|+|.|+-....+|.|.|.|++++.
T Consensus        52 ~dGty~v~Y~p~~~G~y~i~V~~~g~   77 (89)
T 3cnk_A           52 GSRLYSVSYLLKDKGEYTLVVKWGHE   77 (89)
T ss_dssp             ETTEEEEEEECCSCEEEEEEEEETTE
T ss_pred             CCCEEEEEEEECCCccEEEEEEECCE
Confidence            58999999888788889999988763

>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=85.95  E-value=0.94  Score=26.69  Aligned_cols=27  Identities=30%  Similarity=0.560  Sum_probs=22.7

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..||+|.|+-....+|.|.|.|++++.
T Consensus        64 ~~dGty~V~Y~p~~~G~y~I~V~~~g~   90 (124)
T 2dmb_A           64 NEDGTYDIFYTAAKPGTYVIYVRFGGV   90 (124)
T ss_dssp             CTTSCEEEEEECSSCEEEEEEEEESSC
T ss_pred             CCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence            468999999888888999999998653

>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.59  E-value=0.9  Score=25.82  Aligned_cols=26  Identities=19%  Similarity=0.386  Sum_probs=21.2

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|+|+.++
T Consensus        72 ~~dGty~v~y~p~~~G~y~i~V~~~g   97 (113)
T 2ds4_A           72 NKDGTYYISYTPKEPGVYTVWVCIKE   97 (113)
T ss_dssp             CSSSEEEEEEECSSSEEEEEEEEESS
T ss_pred             CCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            35899999988777888999888765

>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.32  E-value=0.78  Score=27.25  Aligned_cols=27  Identities=30%  Similarity=0.319  Sum_probs=21.6

Q ss_pred             CCCCcEEEEe-eCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRE-SQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~-s~~~~g~~~Lsv~~~~~   38 (101)
                      +.||+|+||- ....+|.|.+.|...++
T Consensus        80 n~DGsy~v~Yr~~~~~g~~~I~V~~~~~  107 (124)
T 2di7_A           80 RKDGSFIVRYRMYASYKNLKVEIKFQGQ  107 (124)
T ss_dssp             CSSSCCEEECCCCSCCSCCEEEEESSSC
T ss_pred             CCCCeEEEEEECCCCCCCEEEEEEECCE
Confidence            4699999997 55557899999987654

>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=84.09  E-value=1.4  Score=26.08  Aligned_cols=26  Identities=23%  Similarity=0.288  Sum_probs=22.0

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|.|++++
T Consensus        81 ~~dGty~v~Y~p~~~G~y~I~V~~~g  106 (131)
T 2di9_A           81 NGDGTCSVSYLPTKPGEYFVNILFEE  106 (131)
T ss_dssp             CSSSEEEEEEECSSSSEEEEEEEESS
T ss_pred             CCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            46899999988888899999998865

>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.98  E-value=0.74  Score=26.16  Aligned_cols=26  Identities=19%  Similarity=0.249  Sum_probs=22.0

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|.|++++
T Consensus        61 ~~dGty~v~Y~p~~~G~y~I~V~~~g   86 (105)
T 2ee6_A           61 HKNGSCGVSYIAQEPGNYEVSIKFND   86 (105)
T ss_dssp             CCSSCCCEEEEESSCEEEEEEEEETT
T ss_pred             CCCCEEEEEEEECCCceEEEEEEECC
Confidence            46899999988777899999999876

>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=83.30  E-value=1.2  Score=25.38  Aligned_cols=26  Identities=19%  Similarity=0.305  Sum_probs=21.5

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|.|++++
T Consensus        64 ~~dGty~v~Y~p~~~G~y~i~V~~~g   89 (108)
T 2dj4_A           64 NGDGTHTVTYTPSQEGPYMVSVKYAD   89 (108)
T ss_dssp             CSSSEEEEEECCSSCEEEEEEEEESS
T ss_pred             CCCCEEEEEEEeCCCeeEEEEEEECC
Confidence            35899999988777889999998865

>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=82.70  E-value=0.81  Score=26.36  Aligned_cols=26  Identities=23%  Similarity=0.332  Sum_probs=22.5

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      ..+|+|.|+-....+|.|.|.|++++
T Consensus        61 ~~dGty~V~Y~p~~~G~y~I~V~~~g   86 (111)
T 2d7o_A           61 NKDGTCTVSYLPTAPGDYSIIVRFDD   86 (111)
T ss_dssp             CSSSEEEEEECCSSCEEEEEECBBSS
T ss_pred             CCCCEEEEEEEeCCCeEEEEEEEECC
Confidence            45899999988888899999999865

>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=82.68  E-value=1.5  Score=25.24  Aligned_cols=27  Identities=30%  Similarity=0.468  Sum_probs=22.0

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        65 ~~dGty~v~Y~p~~~G~y~i~V~~~g~   91 (115)
T 2d7m_A           65 NGDGTYTVSYLPDMSGRYTITIKYGGD   91 (115)
T ss_dssp             CSSSCEEEEECCCSCEEEEEEEEESSC
T ss_pred             CCCCEEEEEEEeCCCceEEEEEEECCE
Confidence            358999999888888899999988653

>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.09  E-value=1.1  Score=26.07  Aligned_cols=27  Identities=26%  Similarity=0.511  Sum_probs=21.5

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|+|.|+-....+|.|.|.|++++.
T Consensus        75 ~~dGty~v~Y~p~~~G~y~i~V~~~g~  101 (119)
T 2e9j_A           75 NKDGTYAVTYIPDKTGRYMIGVTYGGD  101 (119)
T ss_dssp             CCSSEEEEEECCCSCSEEEECCEESSC
T ss_pred             CCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence            358899998887778889888888653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	101
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	2e-23
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	4e-16
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	2e-15
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	5e-15
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	9e-15
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	5e-14
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	6e-14
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	9e-14
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	2e-13
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	5e-13
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	6e-13
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	7e-13
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	2e-12
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	2e-12
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	6e-12
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	2e-11
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	2e-11
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	3e-11
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	3e-11
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	3e-11
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	6e-11
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	2e-10
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	4e-10
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	5e-10
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	5e-10
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	5e-10
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	9e-10
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	4e-09
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	7e-09
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	8e-09
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	2e-08
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	2e-07
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	9e-07
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	7e-06

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 2e-23
 Identities = 54/79 (68%), Positives = 62/79 (78%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
           + +GDFLVRES  +PGQYVLTG Q G  KHLLL+DPEGVVRTKD  FESVSHL++YH  N
Sbjct: 24  QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDN 83

Query: 72  QLPIISAESALILRNPVAK 90
            LPIISA S L L+ PV +
Sbjct: 84  HLPIISAGSELCLQQPVER 102

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.8 bits (160), Expect = 4e-16
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 1   MSR-IAKTAFPSRQDGDFLVRES-QGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM- 57
           +SR           DG FLVR++     G Y LT  +GG  K + +   +G     D + 
Sbjct: 18  ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLT 77

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           F SV  L+N++    L   + +  + L  PV+K
Sbjct: 78  FNSVVELINHYRNESLAQYNPKLDVKLLYPVSK 110

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 2e-15
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSHLVNYHCQ 70
             DG FL R S+ +PG   L+  + G   H+ + +            F +++ LV Y+ +
Sbjct: 23  GVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYME 82

Query: 71  NQLPIISAESALI-LRNPVAK 90
           +   +      +I L+ P+  
Sbjct: 83  HHGQLKEKNGDVIELKYPLNC 103

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.6 bits (152), Expect = 5e-15
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 1  MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMF 58
          +SR  A+     +  G F++R SQ SPG + ++       +H  ++ D +G        F
Sbjct: 13 LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKF 72

Query: 59 ESVSHLVNYHCQNQLPIISAESALILRN 86
           S++ LV+Y+       IS +  + LR+
Sbjct: 73 PSLNKLVDYYRTTS---ISKQKQVFLRD 97

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 9e-15
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYH 68
            R DG FL+RES+ +PG + L+   G   +H  ++ D  G        F S++ LV+YH
Sbjct: 21 KQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 80

Query: 69 CQNQLPIISAESALILRN 86
                 +S    + LR+
Sbjct: 81 RSTS---VSRNQQIFLRD 95

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 5e-14
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK------DRMFESVSH 63
               DG FL+R+SQ +P  +VLT       K+  ++  E   +T       +  F  +  
Sbjct: 24  QGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQ 83

Query: 64  LVNYHCQNQLPIISAESALILRNPVAK 90
           LV+++  N+  +        L++   +
Sbjct: 84  LVDFYQLNKGVLPCK-----LKHHCIR 105

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 6e-14
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 11/89 (12%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK------DRMFESVSH 63
               DG FLVRESQ +P  +VL+       KH L++  E   R           F  +  
Sbjct: 29  QGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQ 88

Query: 64  LVNYHCQNQLPIISAESALILRNPVAKCA 92
           LV +H  N+  +       +LR+   + A
Sbjct: 89  LVEFHQLNRGILPC-----LLRHCCTRVA 112

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 9e-14
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 11 SRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVRTKDRMFESVSHLVNYHC 69
            + G FLVRES   PG Y L     G  +H  ++     +   ++  FE++  LV ++ 
Sbjct: 22 PPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT 81

Query: 70 QNQLPIISAESALILRNPVAK 90
           +   + +      L  P   
Sbjct: 82 TDADGLCT-----RLIKPKVM 97

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-13
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVR------TKDRMFESVS 62
            +  DG +L+R+S+  PG Y L     G      +     G            R F  + 
Sbjct: 22  ATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIK 81

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
           +L++   +    I+       L+ PV K
Sbjct: 82  NLISAFQKPDQGIVIP-----LQYPVEK 104

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.7 bits (139), Expect = 5e-13
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTG-YQGGTKKHLLLIDPEGVVR-TKDRM 57
            +R  A+     ++DG FLVRES    G Y  +    G  K  ++     G        +
Sbjct: 16  SNRNKAENLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNL 74

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPV 88
           + S+  LV ++    L   +    + L  PV
Sbjct: 75  YSSLKELVLHYQHTSLVQHNDSLNVTLAYPV 105

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-13
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-----------DPEGVVRTKDRMFES 60
            + G FLVRESQ  PG +VL+   G  K                             F+S
Sbjct: 20  GKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDS 79

Query: 61  VSHLVNYHCQNQLPIISAESALILRNPV 88
           ++ LV ++ +N +   +  + L L+ P+
Sbjct: 80  LTDLVEHYKKNPMV-ETLGTVLQLKQPL 106

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.9 bits (137), Expect = 7e-13
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYH 68
            R  G F++R+S+  PG+ VLT    G  KHL L  +  G    +   F+SV  ++ + 
Sbjct: 25 GPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHF 84

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-12
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 1  MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMF 58
          +S   A       +DG FLVRES   PG YVL    G    H  ++  +G +   +   F
Sbjct: 11 ISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFF 70

Query: 59 ESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
           ++  +V ++ +++  I +      L  P  K
Sbjct: 71 CNLMDMVEHYSKDKGAICTK-----LVRPKRK 97

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-12
 Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI--DPEGVVRTKDRMFESVSHLVNY 67
               G FL+R S+     YVL+       +H  +       +   +   F S+  LVNY
Sbjct: 21 EGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNY 80

Query: 68 HCQNQLPIISAESALILRNPVAK 90
          H    L        L L  P  K
Sbjct: 81 HRAQSLSHG-----LRLAAPCRK 98

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.7 bits (131), Expect = 6e-12
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 12/88 (13%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVR------TKDRMFESVS 62
               DG+FL+R+S+  PG   L            +  +  G  R      T   +F ++ 
Sbjct: 21  KGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQ 80

Query: 63  HLVNYHCQNQLPIISAESALILRNPVAK 90
            LV+ + +    ++       L NP+ +
Sbjct: 81  ELVSKYGKPGQGLVV-----HLSNPIMR 103

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-11
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH-LLLIDPEGVVR-TKDRMFESVSHLVNY 67
               DG +L+R+S+   G + L+   G    H  +  +  G       R   S + L +Y
Sbjct: 24  GGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHY 83

Query: 68  HCQNQLPIISAESALILRNPVAK 90
           H Q    ++       L+ P  +
Sbjct: 84  HSQESDGLVCL-----LKKPFNR 101

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-11
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 7/83 (8%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRM-FESVSHLVNY 67
               DG FL+R+   S G YVL+        H  +     G             + L  +
Sbjct: 25  AGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEF 84

Query: 68  HCQNQLPIISAESALILRNPVAK 90
           + ++   +        LR P  +
Sbjct: 85  YSRDPDGLPC-----NLRKPCNR 102

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 3e-11
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 25/109 (22%)

Query: 1   MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--------------- 44
           +SR  A      ++ G FLVR+S  SPG YVL+  +     H ++               
Sbjct: 7   LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQ 66

Query: 45  ---IDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
                    +R  D+ F+S+  L+ ++  + L   +      L  PV++
Sbjct: 67  PPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTT------LIEPVSR 109

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.7 bits (126), Expect = 3e-11
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 1  MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEG-VVRTKDRM 57
          +SR  A+    S  +G FLVRES+ SPGQ  ++    G   H  +    +G +  + +  
Sbjct: 12 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 71

Query: 58 FESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
          F +++ LV++H      +I+      L  P  K
Sbjct: 72 FNTLAELVHHHSTVADGLIT-----TLHYPAPK 99

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 3e-11
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG--VVRTKDRM 57
           +SR  A+    S+  G FL+R S    G  +    Q      ++ +  +G  ++  +   
Sbjct: 16  ISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVA 75

Query: 58  FESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
             S+  LV +H Q  +         +L  P  +
Sbjct: 76  HTSLDALVTFHQQKPIEPRRE----LLTQPCRQ 104

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 6e-11
 Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 9/94 (9%)

Query: 1   MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG-----VVRTK 54
           M +  A+     + +G FL+R+S      + ++  +     H  +               
Sbjct: 18  MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPC 77

Query: 55  DRMFESVSHLVNYHCQNQLPIISAESALILRNPV 88
                 ++ L+ ++      +       +L  P+
Sbjct: 78  VFHSPDITGLLEHYKDPSACMF---FEPLLSTPL 108

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.8 bits (121), Expect = 2e-10
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 12  RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
            +DG FLVR+    P  Y ++    G  KH  +      V   +  F+S+  L++Y+ ++
Sbjct: 29  PRDGAFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKH 87

Query: 72  QLPIISAESALILRNPVAK 90
            L        + LR P+ +
Sbjct: 88  PLYRK-----MKLRYPINE 101

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 4e-10
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 1   MSR-IAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--------IDPEGVV 51
           M+   AK       +G FL+R+S  S     ++        +L +        +D    V
Sbjct: 22  MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICV 81

Query: 52  RTKDRMFESVSHLVNYHCQN 71
           ++K + F+SV HL++Y+ Q 
Sbjct: 82  KSKLKQFDSVVHLIDYYVQM 101

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 5e-10
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRM-FESVSHLVNY 67
            ++ DG FL+R  +   G Y L+   G T  H L+  D  G     +   F+++  LV Y
Sbjct: 48  GAQTDGKFLLRPRK-EQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEY 106

Query: 68  HCQNQLPII 76
                  +I
Sbjct: 107 LKLKADGLI 115

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 5e-10
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGY-----QGGTKKHLLLI--DPEGVVRTKDRMFESVS 62
               G FL+RES+ + G Y L+       +G   KH  +   D  G   T    FE++ 
Sbjct: 25 FGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQ 84

Query: 63 HLVNYHCQNQLPII 76
           LV ++ +    + 
Sbjct: 85 QLVQHYSERAAGLS 98

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 5e-10
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGY-----QGGTKKHLLLI--DPEGVVRTKDRMFESVS 62
          P    G FL+RES+ + G + L+       QG   KH  +   D  G   +    F  + 
Sbjct: 23 PGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLH 82

Query: 63 HLVNYHCQNQL 73
           LV ++     
Sbjct: 83 ELVRHYTNASD 93

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 9e-10
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-------DPEGVVRTKDRMFESVS 62
               G FLVRES+ + G Y L+       K L +        D  G   T    F S+ 
Sbjct: 24 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 83

Query: 63 HLVNYHCQNQL 73
           LV Y+ ++  
Sbjct: 84 QLVAYYSKHAD 94

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 4e-09
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 1   MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFES 60
           +SR          +G +++RESQ  PG Y L    G    +   +  +G     ++ FES
Sbjct: 42  ISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLN-YRLFHDGKHFVGEKRFES 100

Query: 61  VSHLV 65
           +  LV
Sbjct: 101 IHDLV 105

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (112), Expect = 7e-09
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 11/89 (12%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGY----QGGTKKHLLLIDPE--GVVRTKDRMFESVSH 63
           P  + G FL+RES+ + G + L+      QG   KH  +   +  G   +    F ++  
Sbjct: 31  PMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQA 90

Query: 64  LVNYHCQNQLPIISAESALILRNPVAKCA 92
           LV ++ +    +        L  P    A
Sbjct: 91  LVQHYSKKGDGLCQ-----KLTLPCVNLA 114

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 8e-09
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKH------LLLIDPEGVVR-TKDRMFESVS 62
          P    G F++R+S+ + G Y L+      ++        +     G    +    F ++ 
Sbjct: 20 PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ 79

Query: 63 HLVNYHCQNQL 73
           LV+++ +   
Sbjct: 80 ELVDHYKKGND 90

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 2e-08
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 10  PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE--GVVRTKDRMFESVSHLVNY 67
            S+ +G FL+R    + G Y L     G   H  +   +   +   + + F+++  LV +
Sbjct: 48  GSKTNGKFLIRARD-NNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEH 106

Query: 68  HCQNQLPIISAESALILRNPVAK 90
           +      ++      +L  P  K
Sbjct: 107 YSYKADGLLR-----VLTVPCQK 124

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (102), Expect = 2e-07
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 16/86 (18%)

Query: 13  QDGDFLVRESQGSPGQYVLT------GYQGGTKKHLLLI----DPEGVVRTKDRMFESVS 62
           ++G F+VR+S+ +PG Y ++        +    KH  +      P+     +  +F+S+ 
Sbjct: 27  KEGAFMVRDSR-TPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIP 85

Query: 63  HLVNYHCQNQLPIISAESALILRNPV 88
            L+ YH  N   +++      LR PV
Sbjct: 86  LLIQYHQYNGGGLVTR-----LRYPV 106

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (99), Expect = 9e-07
 Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 3/92 (3%)

Query: 1   MSRI-AKTAFPSRQDGDFLVRESQGS-PGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMF 58
           +S+   +    ++  G FL+R S+ S  G    T +          I        +    
Sbjct: 14  ISKERERAILSTKPPGTFLLRFSESSKEGGVTFT-WVEKDISGSTQIQSVEPYTKQQLNN 72

Query: 59  ESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
            S + ++  +       I     + L   + K
Sbjct: 73  MSFAEIIMGYKIMDATNILVSPLVYLYPDIPK 104

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 39.6 bits (92), Expect = 7e-06
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 11  SRQDGDFLVRESQGSPGQYVLT---GYQGGTKKHLLLI--DPEGVVRTKDRMFESVSHLV 65
           ++  G F++R S+ +PGQ+ +           KH L+   D     +T        S  V
Sbjct: 27  NQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAAAKKTFPDFLSEHSQFV 86

Query: 66  NYHCQNQLPIISAESALILRNPV 88
           N     +    +     + ++  
Sbjct: 87  NLLQWTKDTNGAPRFLKLHKDTA 109

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.96
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.94
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.94
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.94
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.93
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.93
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.93
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.93
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.92
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.92
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.92
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.91
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.91
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.91
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.91
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.91
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.91
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.91
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.91
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.91
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.9
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.9
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.9
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.9
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.9
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.89
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.88
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.88
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.86
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.85
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.8
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.45
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	99.4
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	97.56
d3buxb3	88	Cbl {Human (Homo sapiens) [TaxId: 9606]}	91.58
d2w0pa1	92	Filamin a {Human (Homo sapiens) [TaxId: 9606]}	84.95
d1wlha1	101	F-actin cross-linking gelation factor (ABP-120) re	83.28
d2dica1	98	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	81.34
d2di8a1	98	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	81.07
d2diaa1	100	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	80.26
d2dj4a1	101	Filamin b {Human (Homo sapiens) [TaxId: 9606]}	80.2

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3e-29  Score=147.60  Aligned_cols=90  Identities=62%  Similarity=0.939  Sum_probs=81.7

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCccccCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAES   80 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~   80 (101)
                      |+|++| +.||+++|+||||.|++.+|.|+||+++++.++||+|...+|.|.+++..|+||.|||+||+.+++++.+.+.
T Consensus        14 i~R~~A-e~lL~~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~~~   92 (104)
T d1mila_          14 LSRREA-EALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGS   92 (104)
T ss_dssp             CCHHHH-HTTCCSTTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHHTCCEEETTE
T ss_pred             CCHHHH-HHHHhcCCcEEEEecCCCCCCEEEEEEEccccceEEEEeCCCEEEeCCeeECCHHHHHHHHhhCCCCcccCCc
Confidence            789995 5566889999999999989999999999999999999877788988889999999999999999999877777


Q ss_pred             ceEEcCccccC
Q psy8455          81 ALILRNPVAKC   91 (101)
Q Consensus        81 ~~~L~~Pv~~~   91 (101)
                      .+.|++||+|+
T Consensus        93 ~~~L~~Pi~R~  103 (104)
T d1mila_          93 ELCLQQPVERK  103 (104)
T ss_dssp             EECCCEECCCC
T ss_pred             ceEeCCCcCCc
Confidence            88899999885

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.6e-27  Score=136.23  Aligned_cols=85  Identities=27%  Similarity=0.355  Sum_probs=72.5

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. ..+|+||||+|++.+|.|+|||+.++.++||+|...+|.|.+ ++..|+||.+||+||+.++.++   
T Consensus        11 isR~eAe~~L~~~~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~L---   87 (97)
T d1jwoa_          11 ISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAI---   87 (97)
T ss_dssp             CCHHHHHHHTCSCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEESSSEESSTTSCCBSCHHHHHHHHHHCCTTS---
T ss_pred             CCHHHHHHHhcCCCCCeEEEEecCCCCccEEEEEEecCceEEEEEEEcCCcEEecCCcccCCHHHHHHHHhhCCCCC---
Confidence            79999766665 469999999999989999999999999999999755566655 4589999999999999988765   


Q ss_pred             CcceEEcCcccc
Q psy8455          79 ESALILRNPVAK   90 (101)
Q Consensus        79 ~~~~~L~~Pv~~   90 (101)
                        .+.|+.||+|
T Consensus        88 --~~~L~~P~~k   97 (97)
T d1jwoa_          88 --CTKLVRPKRK   97 (97)
T ss_dssp             --SSCCCCBCCC
T ss_pred             --CccCCccCcC
Confidence              3679999986

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.8e-27  Score=136.86  Aligned_cols=86  Identities=28%  Similarity=0.376  Sum_probs=73.9

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEe-CCcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRT-KDRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|++   ++|+||||+|.+.+|.|+|||+.+++++||+|. ..+|.|.+ ++..|+||.+||+||+.+++++
T Consensus         9 isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~~   88 (100)
T d1rjaa_           9 ISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSH   88 (100)
T ss_dssp             CCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCCTTS
T ss_pred             CCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHHHHHhhCCCCC
Confidence            799997776653   589999999999899999999999999999996 56676666 4679999999999999998765


Q ss_pred             cccCcceEEcCccccC
Q psy8455          76 ISAESALILRNPVAKC   91 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~   91 (101)
                           .+.|+.||+|.
T Consensus        89 -----~~~L~~Pc~~~   99 (100)
T d1rjaa_          89 -----GLRLAAPCRKH   99 (100)
T ss_dssp             -----SSCCCSBCCCC
T ss_pred             -----ccCcCeecCCC
Confidence                 47899999875

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-26  Score=135.41  Aligned_cols=87  Identities=23%  Similarity=0.291  Sum_probs=73.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.+++++||+|...++.|.+ ++..|+||.+||+||+.++.++.  
T Consensus        11 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~gl~--   88 (101)
T d1k9aa2          11 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDADGLC--   88 (101)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHHHCCTTSS--
T ss_pred             CCHHHHHHHHcCCCCCCEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCCCceecCCcccCCHHHHHHHHhhCCCCCc--
Confidence            78999666554 469999999999889999999999999999999754555555 46789999999999999987653  


Q ss_pred             CcceEEcCccccCC
Q psy8455          79 ESALILRNPVAKCA   92 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~   92 (101)
                         +.|+.||+++.
T Consensus        89 ---~~L~~P~~~~~   99 (101)
T d1k9aa2          89 ---TRLIKPKVMEG   99 (101)
T ss_dssp             ---SCCCEECCCTT
T ss_pred             ---eeCCccccCCC
Confidence               78999998765

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.6e-26  Score=135.16  Aligned_cols=87  Identities=30%  Similarity=0.390  Sum_probs=73.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. ..+|+||||+|++.+|.|+||++.++.++|++|. ..+|.|.+. +..|+||.+||+||+.++.++. 
T Consensus        12 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~y~~~~~~l~-   90 (101)
T d1opka2          12 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLI-   90 (101)
T ss_dssp             CCHHHHHHHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTCCTTSS-
T ss_pred             CCHHHHHHHhcCCCCCeEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCHHHHHHHHhhCCCCCc-
Confidence            79999665544 3699999999998899999999999999999996 667777775 4789999999999999887553 


Q ss_pred             cCcceEEcCccccCC
Q psy8455          78 AESALILRNPVAKCA   92 (101)
Q Consensus        78 ~~~~~~L~~Pv~~~~   92 (101)
                          +.|..||+|++
T Consensus        91 ----~~L~~P~pr~~  101 (101)
T d1opka2          91 ----TTLHYPAPKRN  101 (101)
T ss_dssp             ----SCCCEECCCCS
T ss_pred             ----eECCCccCCCC
Confidence                67999998753

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4e-26  Score=135.10  Aligned_cols=94  Identities=18%  Similarity=0.338  Sum_probs=77.0

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEe-CCcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRT-KDRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|+.  .+|+||||+|.+.+|.|+||++.+++++|++|...++.|.+ ++..|+||.+||+||+.+.+.+..
T Consensus        10 isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~   89 (109)
T d2shpa2          10 ITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKE   89 (109)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHTCTTCSBS
T ss_pred             CCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHHHHHHHCCCCccc
Confidence            799997766653  48999999999989999999999999999999855555554 568999999999999998876643


Q ss_pred             c-CcceEEcCccccCCCC
Q psy8455          78 A-ESALILRNPVAKCATG   94 (101)
Q Consensus        78 ~-~~~~~L~~Pv~~~~~~   94 (101)
                      . +..+.|+.|++++.+.
T Consensus        90 ~~~~~~~L~~P~~~~~Ps  107 (109)
T d2shpa2          90 KNGDVIELKYPLNCADPT  107 (109)
T ss_dssp             SSSCBCCCCEECCCCCCT
T ss_pred             CCCCeeeccccCCCCCCC
Confidence            2 3557899999876554

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.1e-26  Score=137.68  Aligned_cols=89  Identities=20%  Similarity=0.244  Sum_probs=76.7

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|.   +++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++ ..|+||.+||+||+.++.++
T Consensus        13 i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~~Y~~~~~gL   92 (130)
T d2oq1a1          13 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGL   92 (130)
T ss_dssp             CCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCCTTS
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHHHHHhhCCCCC
Confidence            78999777775   2689999999999999999999999999999996 6677787764 78999999999999988755


Q ss_pred             cccCcceEEcCccccCCCC
Q psy8455          76 ISAESALILRNPVAKCATG   94 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~~~   94 (101)
                           .+.|+.||+++...
T Consensus        93 -----~~~L~~P~~r~~~~  106 (130)
T d2oq1a1          93 -----PCNLRKPCNRPSGL  106 (130)
T ss_dssp             -----SSCCCSBCCCCTTC
T ss_pred             -----CccCCccCCCCCCC
Confidence                 47899999987653

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.5e-26  Score=138.38  Aligned_cols=89  Identities=21%  Similarity=0.370  Sum_probs=75.5

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|.+   ++|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+++ ..|+||.+||+||+.++.++
T Consensus        12 isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~~Y~~~~~gl   91 (129)
T d1a81a1          12 ITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGL   91 (129)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCCTTS
T ss_pred             CCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHHHHHhhCCCCC
Confidence            799997666652   689999999999899999999999999999996 6677777764 78999999999999988755


Q ss_pred             cccCcceEEcCccccCCCC
Q psy8455          76 ISAESALILRNPVAKCATG   94 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~~~   94 (101)
                           .+.|..||+++...
T Consensus        92 -----~~~L~~P~~~~~~~  105 (129)
T d1a81a1          92 -----VCLLKKPFNRPQGV  105 (129)
T ss_dssp             -----SSCCCEECCCCSSC
T ss_pred             -----cccCCCCCCCCCCC
Confidence                 46899999876543

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=3.8e-26  Score=134.39  Aligned_cols=87  Identities=25%  Similarity=0.404  Sum_probs=74.9

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcCcccc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISA   78 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~   78 (101)
                      |+|++|++.|..  .+|+||||.|. .+|.|+||++.+++++||+|...++.|.+++..|+||.+||+||+.+++.+   
T Consensus        16 i~R~eAe~lL~~~~~~G~FLVR~S~-~~~~yvLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~~---   91 (105)
T d2fcia1          16 LTRAQAEHMLMRVPRDGAFLVRKRN-EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYR---   91 (105)
T ss_dssp             SCSHHHHHHHHHSSSSCCEEEEECS-STTCEEEEEEETTEECCCEEBCCSSCEECSSSEESTTHHHHHHHHHSCCST---
T ss_pred             CCHHHHHHHHHhCCCCCeEEEEecC-CCCCEEEEEEeccccEEEEEEecCCeEecCCcccCCHHHHHHHHhhCCCCC---
Confidence            789997766653  38999999995 478999999999999999998667788888899999999999999988744   


Q ss_pred             CcceEEcCccccCCC
Q psy8455          79 ESALILRNPVAKCAT   93 (101)
Q Consensus        79 ~~~~~L~~Pv~~~~~   93 (101)
                        .+.|+.||+++.+
T Consensus        92 --~~~L~~P~~~~~p  104 (105)
T d2fcia1          92 --KMKLRYPINEENS  104 (105)
T ss_dssp             --TCSSCCCCCCTTT
T ss_pred             --ccCCCCCCCCCCC
Confidence              4789999998765

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.7e-25  Score=131.20  Aligned_cols=85  Identities=21%  Similarity=0.356  Sum_probs=70.6

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC------cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD------RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~------~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|++  .+|+||||+|++.+|.|+||++.++.++||+|. ..+|.|.+..      ..|+||.+||+||+.+
T Consensus        10 isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~LV~~y~~~   89 (103)
T d1i3za_          10 LTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKP   89 (103)
T ss_dssp             CCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSS
T ss_pred             CCHHHHHHHHHhCCCCCeEEEEecCCCCCCEEEEEEeCCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHHHHHhhhC
Confidence            789997666653  589999999999999999999999999999995 6677776632      4699999999999988


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|..||.|
T Consensus        90 ~~gl-----~~~L~~P~~R  103 (103)
T d1i3za_          90 GQGL-----VVHLSNPIMR  103 (103)
T ss_dssp             SSSS-----SSCCCEECC-
T ss_pred             CCCC-----eEeCCccccC
Confidence            7655     3679999875

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.6e-25  Score=129.27  Aligned_cols=85  Identities=25%  Similarity=0.357  Sum_probs=69.1

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCC-C--eEEeCC--cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPE-G--VVRTKD--RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~-~--~~~~~~--~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|.   .+||+||||+|++.+|.|+|||+.++++.||+|. ..+ +  .|.+++  ..|+||.+||+||+.+
T Consensus        12 isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~   91 (105)
T d1nrva_          12 ISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLN   91 (105)
T ss_dssp             CCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCcccCCHHHHHHHhccC
Confidence            79999766664   2589999999999999999999999999999995 322 2  355543  6899999999999998


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|+.||+|
T Consensus        92 ~~~L-----~~~L~~Pc~r  105 (105)
T d1nrva_          92 KGVL-----PCKLKHHCIR  105 (105)
T ss_dssp             CTTS-----SSCCCEECCC
T ss_pred             cCCC-----CccCCcCCCC
Confidence            8755     3679999986

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.5e-25  Score=128.53  Aligned_cols=85  Identities=22%  Similarity=0.276  Sum_probs=70.8

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|+   .++|+||||+|++.+|.|+|||+.     ++.++|++|. ..+|.|.+. +..|+||.+||+||+.
T Consensus         8 isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~   87 (103)
T d1qcfa2           8 ISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKK   87 (103)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTS
T ss_pred             CCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHHHHHHHhh
Confidence            79999777675   368999999999999999999985     4689999996 555666654 5789999999999999


Q ss_pred             CCcCccccCcceEEcCcccc
Q psy8455          71 NQLPIISAESALILRNPVAK   90 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +++++     .+.|..||++
T Consensus        88 ~~~gL-----~~~L~~PC~~  102 (103)
T d1qcfa2          88 GNDGL-----CQKLSVPCMS  102 (103)
T ss_dssp             SCTTS-----SSCCCSBCCC
T ss_pred             CCCCC-----CccCCccCCC
Confidence            88755     4789999975

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-24  Score=131.45  Aligned_cols=84  Identities=23%  Similarity=0.351  Sum_probs=71.1

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|+   .++|+||||.|+. +|.|+||++.+++++||+|. ..+|+|.++ +..|+||.+||+||+.++.++
T Consensus        36 isR~~Ae~lL~~~g~~~G~FLVR~S~~-~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~~y~~~~~gL  114 (125)
T d1a81a2          36 ISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGL  114 (125)
T ss_dssp             CCHHHHHHHHHSSCCCTTCEEEEECSS-SSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTCCTTS
T ss_pred             CCHHHHHHHHHhcCCCCceEEEEecCC-CCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCHHHHHHHHhhCCCCC
Confidence            79999766664   2589999999866 68899999999999999996 667778776 478999999999999887655


Q ss_pred             cccCcceEEcCcccc
Q psy8455          76 ISAESALILRNPVAK   90 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~   90 (101)
                           .+.|+.||+|
T Consensus       115 -----~~~L~~P~~k  124 (125)
T d1a81a2         115 -----LRVLTVPCQK  124 (125)
T ss_dssp             -----SSCCCCBCCC
T ss_pred             -----CccCCeeCCC
Confidence                 4789999986

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-24  Score=127.17  Aligned_cols=85  Identities=25%  Similarity=0.372  Sum_probs=71.0

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEe------CCcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRT------KDRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~------~~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|.+  .+|+||||+|++.+|.|+||++.++.+.|++|. ..+|.|.+      ++..|+||.+||+||+.+
T Consensus        11 isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~   90 (104)
T d1d4ta_          11 ISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKP   90 (104)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSS
T ss_pred             CCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEecCCCceEEEEEEcCCCcEEEeeccCCCCcccCCHHHHHHHHhhC
Confidence            799997666653  489999999999999999999999999999996 55666654      236799999999999988


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      +.++     .+.|+.||+|
T Consensus        91 ~~gl-----~~~L~~P~~r  104 (104)
T d1d4ta_          91 DQGI-----VIPLQYPVEK  104 (104)
T ss_dssp             SSSS-----SSCCCEECCC
T ss_pred             CCCC-----cEeCCccccC
Confidence            7655     3679999986

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=127.40  Aligned_cols=84  Identities=21%  Similarity=0.237  Sum_probs=69.9

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCC-----eEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGG-----TKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~-----~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|++   ++|+||||.|++.+|.|+||++..+     .+.|++|. ..+|.|.++ ...|+||.+||+||+.
T Consensus        11 isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~~LV~~y~~   90 (105)
T d1lkka_          11 LSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTN   90 (105)
T ss_dssp             CCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccCCCccEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHhh
Confidence            799997777763   5899999999998999999998743     38999996 556777765 4789999999999999


Q ss_pred             CCcCccccCcceEEcCccc
Q psy8455          71 NQLPIISAESALILRNPVA   89 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~   89 (101)
                      +++++     .+.|+.||+
T Consensus        91 ~~~gL-----~~~L~~Pcp  104 (105)
T d1lkka_          91 ASDGL-----CTRLSRPCQ  104 (105)
T ss_dssp             CCTTS-----SSCCCSBCC
T ss_pred             CCCCC-----CccCCCcCC
Confidence            98765     367999986

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.9e-24  Score=130.41  Aligned_cols=83  Identities=24%  Similarity=0.344  Sum_probs=70.6

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|.+   ++|+||||.|++ +|.|+|||+.+++++||+|. ..+|.|.+++ ..|+||.+||+||+.++.++
T Consensus        36 isR~eAe~lL~~~~~~dGtFLVR~S~~-~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~gL  114 (124)
T d2oq1a2          36 LTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGL  114 (124)
T ss_dssp             CCHHHHHHHHHSSCCCTTEEEEEECSS-TTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHHCCTTS
T ss_pred             CCHHHHHHHHhhcCCCCceEEeEecCC-CCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCHHHHHHHHhhCCCCC
Confidence            789997776653   589999999976 78999999999999999996 5567777754 79999999999999988755


Q ss_pred             cccCcceEEcCccc
Q psy8455          76 ISAESALILRNPVA   89 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~   89 (101)
                           .+.|..||+
T Consensus       115 -----~~~L~~PcP  123 (124)
T d2oq1a2         115 -----IYCLKEACP  123 (124)
T ss_dssp             -----SSCCCSBCC
T ss_pred             -----cccCCCcCc
Confidence                 478999997

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-24  Score=127.10  Aligned_cols=84  Identities=30%  Similarity=0.479  Sum_probs=68.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECC-CC-----------------eEEeCCcccCCH
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDP-EG-----------------VVRTKDRMFESV   61 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~-~~-----------------~~~~~~~~F~sl   61 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.+++++|++|... ++                 .|..++..|+||
T Consensus         7 isR~~Ae~lL~~~~~G~FLVR~S~~~~~~~~LS~~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~sl   86 (109)
T d2eyva1           7 LSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSL   86 (109)
T ss_dssp             CCHHHHHHHCSSCSTTCEEEECCCSSSSCEEEEEEETTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEEETTEEESSH
T ss_pred             CCHHHHHHHhcCCCCCeEEeeecCCCCCCEEEEEEECCEEEEEEEEEcCCcceeeccccccccccccceEEeCCeeeCCH
Confidence            79999666554 468999999999889999999999999999999632 22                 345556789999


Q ss_pred             HHHHHHHhhCCcCccccCcceEEcCcccc
Q psy8455          62 SHLVNYHCQNQLPIISAESALILRNPVAK   90 (101)
Q Consensus        62 ~~LI~~y~~~~~~l~~~~~~~~L~~Pv~~   90 (101)
                      .+||+||+.+.+..      +.|..||+|
T Consensus        87 ~~LV~~y~~~~l~~------~~L~~P~~r  109 (109)
T d2eyva1          87 PALLEFYKIHYLDT------TTLIEPVSR  109 (109)
T ss_dssp             HHHHHHSSSSCSSS------SCCCSBCCS
T ss_pred             HHHHHHHhhCcCCC------CccCCcCCC
Confidence            99999999987633      469999986

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-24  Score=125.29  Aligned_cols=75  Identities=29%  Similarity=0.498  Sum_probs=65.8

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCcCc
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~~l   75 (101)
                      |+|++|++.|.+  ++|+||||+|++.+|.|+||++.+++++||+|. +.+|.|.+++..|+||.+||+||+.+++..
T Consensus        10 isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~~~~l~~   87 (96)
T d1jyra_          10 IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSR   87 (96)
T ss_dssp             CCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTSSCSCS
T ss_pred             CCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEeCCceEEEEEEECCCCeEEeCCccCCCHHHHHHHHhhCCCCC
Confidence            799997666643  589999999999899999999999999999996 666788888889999999999999988643

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.7e-24  Score=125.63  Aligned_cols=73  Identities=25%  Similarity=0.410  Sum_probs=65.3

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhhCCc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQNQL   73 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~~~~   73 (101)
                      |+|++|++.|. .++|+||||.|++.+|.|+||++.++.++|++|. ..+|+|.+++..|+||.+||+||+.+++
T Consensus        13 isR~~Ae~lL~~~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~~~~l   87 (97)
T d1r1qa_          13 LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSI   87 (97)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCCBSSHHHHHHHTTTSCS
T ss_pred             CCHHHHHHHHhcCCCCCEEEeecCCCCCCEEEEEEecCCeEEEEEEEcCCCeEEeCCCCcCCHHHHHHHHccCCc
Confidence            79999766555 5799999999998899999999999999999996 6678888888999999999999999875

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-24  Score=128.64  Aligned_cols=86  Identities=31%  Similarity=0.444  Sum_probs=70.6

Q ss_pred             CChHHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE--CCCCe--EEeCC--cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI--DPEGV--VRTKD--RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~--~~~~~--~~~~~--~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|.   .++|+||||+|++.+|.|+||++.+++++|++|.  ..++.  |.+++  ..|+||.+||+||+.+
T Consensus        17 isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~   96 (113)
T d2qmsa1          17 ISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLN   96 (113)
T ss_dssp             BCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHHHHHhccC
Confidence            78999766665   3689999999999899999999999999999995  23343  44443  5799999999999999


Q ss_pred             CcCccccCcceEEcCccccC
Q psy8455          72 QLPIISAESALILRNPVAKC   91 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~~   91 (101)
                      +.++     .+.|+.||+|-
T Consensus        97 ~~~L-----~~~L~~pc~r~  111 (113)
T d2qmsa1          97 RGIL-----PCLLRHCCTRV  111 (113)
T ss_dssp             CTTS-----SSCCCEECCSS
T ss_pred             CCCC-----ccccCCCCcCc
Confidence            8755     47899999874

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=2e-24  Score=127.29  Aligned_cols=88  Identities=25%  Similarity=0.312  Sum_probs=70.5

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC-cccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD-RMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~-~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. .++|+||||.|. .+|.|+||++.+++++||+|. ..+|+|..+. ..|+||.+||+||+.+++....
T Consensus        16 isR~eAe~lL~~~~~G~FLVR~S~-~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y~~~~l~~~~   94 (107)
T d1qada_          16 SNRNKAENLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHN   94 (107)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEEC----CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSCGGGTC
T ss_pred             CCHHHHHHHHcCCCCCcEEEEecC-CCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHHHhCcccccc
Confidence            78999666554 469999999995 478999999999999999996 5556666554 6899999999999999887655


Q ss_pred             cCcceEEcCccc
Q psy8455          78 AESALILRNPVA   89 (101)
Q Consensus        78 ~~~~~~L~~Pv~   89 (101)
                      .+..+.|+.||-
T Consensus        95 ~~l~~~L~~Pv~  106 (107)
T d1qada_          95 DSLNVTLAYPVY  106 (107)
T ss_dssp             TTCCCCCCEETT
T ss_pred             CCCceEcccccc
Confidence            566788998874

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-24  Score=127.58  Aligned_cols=88  Identities=14%  Similarity=0.136  Sum_probs=72.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCC-----cccCCHHHHHHHHhhCCcC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKD-----RMFESVSHLVNYHCQNQLP   74 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~-----~~F~sl~~LI~~y~~~~~~   74 (101)
                      |+|++|++.|. .++|+||||+|++.+|.|+||++.++.++|++|...+|.|.++.     ..|+||.+||+||+.+++.
T Consensus        18 isR~~Ae~lL~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~l~~~~~~~~~F~sl~~LV~~Y~~~~~~   97 (112)
T d2izva2          18 MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSAC   97 (112)
T ss_dssp             CCHHHHHHHHTTCCTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTCCGGGC
T ss_pred             CCHHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEecCCceEEEEEEeCCeEEEeecccCcccCCCHHHHHHHHhccccc
Confidence            78999766554 35999999999988899999999999999999976567777743     3699999999999988775


Q ss_pred             ccccCcceEEcCccccC
Q psy8455          75 IISAESALILRNPVAKC   91 (101)
Q Consensus        75 l~~~~~~~~L~~Pv~~~   91 (101)
                      ..   ....|..||+|+
T Consensus        98 ~~---~~~llt~P~~r~  111 (112)
T d2izva2          98 MF---FEPLLSTPLIRT  111 (112)
T ss_dssp             CT---TSCCCCEECCCC
T ss_pred             cc---CccccCCCCCCC
Confidence            42   345689999875

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.3e-24  Score=124.33  Aligned_cols=88  Identities=27%  Similarity=0.418  Sum_probs=72.1

Q ss_pred             CChHHHHhcccC--CCCcEEEEeeCCCCCCEEEEEEeC----------CeEEEEEEECCCCeEEe-CCcccCCHHHHHHH
Q psy8455           1 MSRIAKTAFPSR--QDGDFLVRESQGSPGQYVLTGYQG----------GTKKHLLLIDPEGVVRT-KDRMFESVSHLVNY   67 (101)
Q Consensus         1 isR~~a~~~Ll~--~~G~FLvR~s~~~~g~~~Lsv~~~----------~~~~h~~I~~~~~~~~~-~~~~F~sl~~LI~~   67 (101)
                      |+|++|++.|..  ++|+||||+|++.+|.|+||++..          +.++|+.|...++.|.+ +...|+||.+||+|
T Consensus         7 i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~F~sl~~LV~~   86 (108)
T d2shpa3           7 LSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEH   86 (108)
T ss_dssp             CCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSSHHHHHHH
T ss_pred             CCHHHHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEecCccccccccccceeeEEEEeCCCceEeCCCcccCCHHHHHHH
Confidence            799997666653  589999999999899999999974          45789999755565655 45899999999999


Q ss_pred             HhhCCcCccccCcceEEcCccc
Q psy8455          68 HCQNQLPIISAESALILRNPVA   89 (101)
Q Consensus        68 y~~~~~~l~~~~~~~~L~~Pv~   89 (101)
                      |+.++++. +.+..+.|++||.
T Consensus        87 y~~~~l~~-~~g~~~~L~~Pv~  107 (108)
T d2shpa3          87 YKKNPMVE-TLGTVLQLKQPLN  107 (108)
T ss_dssp             HHHSCCBC-TTSCBCCCCEECC
T ss_pred             HhhCCCCC-CCCceEEcCCCCc
Confidence            99998766 4456778999985

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.1e-24  Score=124.43  Aligned_cols=84  Identities=24%  Similarity=0.272  Sum_probs=69.3

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEeC-----CeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQG-----GTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~~-----~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|++   ++|+||||+|.+.+|.|+||++..     ..+.|++|. ..+|.|.+. +..|+||.+||+||+.
T Consensus        12 i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g~~~~~~~~~F~sl~eLV~~y~~   91 (106)
T d1o48a_          12 ITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSK   91 (106)
T ss_dssp             CCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHHHHHTT
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccCcccceEEEEEEEecCCCEEEcCCeeECCHHHHHHHHhh
Confidence            789997777753   589999999999899999999874     357889885 556767665 5789999999999999


Q ss_pred             CCcCccccCcceEEcCccc
Q psy8455          71 NQLPIISAESALILRNPVA   89 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~Pv~   89 (101)
                      ++.++     .+.|+.||+
T Consensus        92 ~~~gL-----~~~L~~pcP  105 (106)
T d1o48a_          92 HADGL-----CHRLTTVCP  105 (106)
T ss_dssp             CCTTS-----SSCCCSBCC
T ss_pred             CCCCC-----CccCCCcCC
Confidence            88755     367999986

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3.2e-24  Score=127.68  Aligned_cols=85  Identities=22%  Similarity=0.258  Sum_probs=70.7

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|++   ++|+||||+|++.+|.|+||++.    ++.++|++|. ..+|.|.++ ...|+||.+||+||+.+
T Consensus        19 isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~eLV~~y~~~   98 (114)
T d1blja_          19 ISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKK   98 (114)
T ss_dssp             CCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeeccCCCEEEEEEEEEcCCCCEEecCCceECCHHHHHHHHhhC
Confidence            799997777763   58999999999889999999985    3568999996 456666665 46899999999999999


Q ss_pred             CcCccccCcceEEcCcccc
Q psy8455          72 QLPIISAESALILRNPVAK   90 (101)
Q Consensus        72 ~~~l~~~~~~~~L~~Pv~~   90 (101)
                      ++++.     +.|..||++
T Consensus        99 ~~gL~-----~~L~~PC~~  112 (114)
T d1blja_          99 GDGLC-----QKLTLPCVN  112 (114)
T ss_dssp             CSSSS-----SCCCCCSCC
T ss_pred             CCCCC-----ccCCccCcC
Confidence            87664     689999976

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-23  Score=123.24  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=71.4

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCC--cccCCHHHHHHHHhhCCcCcc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKD--RMFESVSHLVNYHCQNQLPII   76 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~--~~F~sl~~LI~~y~~~~~~l~   76 (101)
                      |+|++|++.|. .++|+||||.|...++ |+|+++.++.++|++|. ..+|.|.+.+  ..|+||.+||+||+.++++. 
T Consensus        16 isR~eAe~lL~~~~~G~FLvR~S~~~~~-y~Lsv~~~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~y~~~~~~~-   93 (106)
T d2cs0a1          16 ISREDAENLLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEP-   93 (106)
T ss_dssp             CCHHHHHHHHHTSCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSCCSS-
T ss_pred             CCHHHHHHHHcCCCCCcEEEEecCCCCC-EEEEEEecCCceeEEEEEcCCCCEEEecCCccCCCHHHHHHHHHHCCCCC-
Confidence            78999766554 3599999999987666 99999999999999996 5567676643  57999999999999987632 


Q ss_pred             ccCcceEEcCccccCC
Q psy8455          77 SAESALILRNPVAKCA   92 (101)
Q Consensus        77 ~~~~~~~L~~Pv~~~~   92 (101)
                         ..+.|++||++++
T Consensus        94 ---~~~~L~~P~~~~~  106 (106)
T d2cs0a1          94 ---RRELLTQPCRQKD  106 (106)
T ss_dssp             ---CCCCCCSBCCCSS
T ss_pred             ---ccCcccCcCCCCC
Confidence               4578999999864

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.5e-23  Score=121.23  Aligned_cols=82  Identities=24%  Similarity=0.291  Sum_probs=67.3

Q ss_pred             CChHHHHhcccC---CCCcEEEEeeCCCCCCEEEEEEe-----CCeEEEEEEE-CCCCeEEeC-CcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR---QDGDFLVRESQGSPGQYVLTGYQ-----GGTKKHLLLI-DPEGVVRTK-DRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~---~~G~FLvR~s~~~~g~~~Lsv~~-----~~~~~h~~I~-~~~~~~~~~-~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|++   ++|+||||+|++.+|.|+||++.     ++.++|++|. ..+|.|.++ ...|+||.+||+||+.
T Consensus        13 i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~   92 (104)
T d1g83a2          13 LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSE   92 (104)
T ss_dssp             CCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSSSCEEEEEEEEEECTTSCEEETTTEEESSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecCcCCeEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHhh
Confidence            799997777763   58999999999999999999986     4679999996 555666554 5799999999999999


Q ss_pred             CCcCccccCcceEEcCc
Q psy8455          71 NQLPIISAESALILRNP   87 (101)
Q Consensus        71 ~~~~l~~~~~~~~L~~P   87 (101)
                      ++.++.     ++|+.|
T Consensus        93 ~~~gL~-----~~L~~P  104 (104)
T d1g83a2          93 RAAGLS-----SRLVVP  104 (104)
T ss_dssp             CCTTSS-----SCCCCC
T ss_pred             CCCCCc-----eeCCCC
Confidence            987653     567766

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=2.6e-24  Score=127.42  Aligned_cols=90  Identities=29%  Similarity=0.394  Sum_probs=74.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCC-CCCEEEEEEeCCeEEEEEEECCCCeEEeC-CcccCCHHHHHHHHhhCCcCccc
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGS-PGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQLPIIS   77 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~-~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~-~~~F~sl~~LI~~y~~~~~~l~~   77 (101)
                      |+|++|++.|. ..+|+||||+|++. ++.|+|+++.++.+.|++|...+|.|.+. ...|+||.+||+||+.++++...
T Consensus        18 isR~eAe~lL~~~~~G~FLVR~S~~~~~~~~~ls~~~~~~~~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l~~~~   97 (111)
T d1fu6a_          18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNSVVELINHYRNESLAQYN   97 (111)
T ss_dssp             CCSHHHHHHSSSCSSCCCCCBSSCCSSSCCSBCEEEETTEEEECCCCCTTTCCCTTTTSCCCCTTHHHHHHHTTCSTTTC
T ss_pred             CCHHHHHHHhCcCCCCEEEEEeccCCCCccEEEEEecCCceEEEEEEEcCCeEEECCCcccCCHHHHHHHHhhCcCCccC
Confidence            78999666555 35999999999765 46799999999999999997556656555 47899999999999999987755


Q ss_pred             cCcceEEcCcccc
Q psy8455          78 AESALILRNPVAK   90 (101)
Q Consensus        78 ~~~~~~L~~Pv~~   90 (101)
                      .+..+.|+.||.|
T Consensus        98 ~~l~~~L~~Pv~r  110 (111)
T d1fu6a_          98 PKLDVKLLYPVSK  110 (111)
T ss_dssp             SSCCCCSCCCCCC
T ss_pred             CCCccccCccccC
Confidence            5678899999987

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=6.8e-23  Score=120.83  Aligned_cols=83  Identities=27%  Similarity=0.426  Sum_probs=66.0

Q ss_pred             CChHHHHhccc--CCCCcEEEEeeCCCCCCEEEEEEeC------CeEEEEEEE-CCC--CeEEeC-CcccCCHHHHHHHH
Q psy8455           1 MSRIAKTAFPS--RQDGDFLVRESQGSPGQYVLTGYQG------GTKKHLLLI-DPE--GVVRTK-DRMFESVSHLVNYH   68 (101)
Q Consensus         1 isR~~a~~~Ll--~~~G~FLvR~s~~~~g~~~Lsv~~~------~~~~h~~I~-~~~--~~~~~~-~~~F~sl~~LI~~y   68 (101)
                      |+|++|++.|+  .++|+||||+|++ +|.|+||++..      +.++||+|. ..+  +.|.+. ...|+||.+||+||
T Consensus        13 isR~eAe~lL~~~~~~G~FLVR~S~~-~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl~~LV~~y   91 (108)
T d1luia_          13 ISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYH   91 (108)
T ss_dssp             CCHHHHHHHHHHHCCTTEEEEEECCT-TTCEEEEEECSCCTTTCSCEEEEECEECCCSSCCEESSSSCCBSSHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCeEEEEecCC-CCCEEEEEEecCCcccCCceeEEEEEEecCCCceeecCCCcccCCHHHHHHHH
Confidence            78999766665  3689999999976 78999999873      468999995 333  345554 58999999999999


Q ss_pred             hhCCcCccccCcceEEcCccc
Q psy8455          69 CQNQLPIISAESALILRNPVA   89 (101)
Q Consensus        69 ~~~~~~l~~~~~~~~L~~Pv~   89 (101)
                      +.++.++     .+.|+.||+
T Consensus        92 ~~~~~~L-----~~~L~~Pv~  107 (108)
T d1luia_          92 QYNGGGL-----VTRLRYPVC  107 (108)
T ss_dssp             HTTCCSS-----SSSSSEECC
T ss_pred             hhCCCCC-----ccCCCCcCC
Confidence            9988755     378999986

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=2.8e-23  Score=117.99  Aligned_cols=70  Identities=29%  Similarity=0.416  Sum_probs=58.7

Q ss_pred             CChHHHHhcccC----CCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEE-CCCCeEEeCCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPSR----QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLI-DPEGVVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll~----~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~-~~~~~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|..    ++|+||||.|++.+|.|+|||+.++.++|++|. ..+|+|..+...|+||.+||+||++
T Consensus        12 isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~LV~~y~t   86 (86)
T d1rpya_          12 LSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFHT   86 (86)
T ss_dssp             CCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEETTEEEEEEC----CCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEECCceEEEEEEEcCCceEEeCCCeeCCHHHHHHhhcC
Confidence            789997666643    479999999998899999999999999999996 5567776677899999999999974

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.7e-21  Score=112.94  Aligned_cols=72  Identities=24%  Similarity=0.314  Sum_probs=60.7

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCC--------cccCCHHHHHHHHhhC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKD--------RMFESVSHLVNYHCQN   71 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~--------~~F~sl~~LI~~y~~~   71 (101)
                      |+|++|++.|. .++|+||||.|+..+|.|+||++.+++++|++|...++.|.++.        ..|+||.+||+||+..
T Consensus        22 i~R~~Ae~~L~~~~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~  101 (103)
T d2c9wa2          22 MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQM  101 (103)
T ss_dssp             CCHHHHHHHHTTSCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHH
T ss_pred             CCHHHHHHHhcCCCCCceEEeccCCCCCCEEEEEEECCEEEEEEEEEcCCeEeeCCccccccCCCccCCHHHHHHHHHhh
Confidence            78999766665 46999999999998999999999999999999975566666632        5799999999999875


Q ss_pred             C
Q psy8455          72 Q   72 (101)
Q Consensus        72 ~   72 (101)
                      +
T Consensus       102 s  102 (103)
T d2c9wa2         102 C  102 (103)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.8e-20  Score=114.80  Aligned_cols=89  Identities=24%  Similarity=0.338  Sum_probs=65.7

Q ss_pred             CChHHHHhcccCCCCcEEEEeeCCCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHH-----HHhhCCcCc
Q psy8455           1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVN-----YHCQNQLPI   75 (101)
Q Consensus         1 isR~~a~~~Ll~~~G~FLvR~s~~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~-----~y~~~~~~l   75 (101)
                      |+|++|++.|..++|+||||+|++.+|.|+|||+.+++++||+|... |.+.+.+..|+|+.|||+     +|+......
T Consensus        42 isR~eAe~lL~~~dGsFLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~-g~~~~~~~~F~sl~eLV~dgLv~~~~~~~~~~  120 (141)
T d1xa6a2          42 ISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHD-GKHFVGEKRFESIHDLVTDGLITLYIETKAAE  120 (141)
T ss_dssp             CCHHHHHHHHCSCTTBEEEEECSSSTTCEEEEEEETTEEEECCCEES-SSEECSSSCCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CCHHHHHHHHcCCCCeEEEEecCCCCCCEEEEEEECCEEEEEEEEEC-CCEEECCCeECCHHHHHhhhhhhhhccccccc
Confidence            79999766554579999999999888999999999999999999753 445567778999999885     565544321


Q ss_pred             cccCcceEEcCccccCCC
Q psy8455          76 ISAESALILRNPVAKCAT   93 (101)
Q Consensus        76 ~~~~~~~~L~~Pv~~~~~   93 (101)
                      .   ....+..||..+.+
T Consensus       121 ~---~~~~~t~p~~~~~p  135 (141)
T d1xa6a2         121 Y---ISKMTTNPIYEHIG  135 (141)
T ss_dssp             H---HHHTTSSCCGGGSS
T ss_pred             c---cccccCccccccCC
Confidence            1   12234566665433

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.45  E-value=6e-14  Score=84.50  Aligned_cols=65  Identities=22%  Similarity=0.316  Sum_probs=50.4

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCCCCCEEEEEEeC---CeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhh
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGSPGQYVLTGYQG---GTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQ   70 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~~g~~~Lsv~~~---~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~   70 (101)
                      |+|++|++.|. .++|+||||.|++.+|.|+||++..   +.++|++|+..++     +..|.+++++|..|..
T Consensus        16 isr~~ae~~L~~~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~-----~~~~~sl~d~l~~~~~   84 (131)
T d1uura3          16 MGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDT-----AAAKKTFPDFLSEHSQ   84 (131)
T ss_dssp             CCHHHHHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGS-----BTTTBCHHHHHTTCTT
T ss_pred             CCHHHHHHHHhcCCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCC-----CcccccHHHHHHhHHH
Confidence            79999666655 3699999999999999999999974   6799999963222     2467888888766543

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=1.1e-14  Score=88.67  Aligned_cols=73  Identities=16%  Similarity=0.101  Sum_probs=58.2

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeC-CCCCCEEEEEEeCCeEEEEEEECCCCeEEeCCcccCCHHHHHHHHhhCCcC
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQ-GSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP   74 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~-~~~g~~~Lsv~~~~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~   74 (101)
                      |+|++|++.|. .++|+||||.|+ +.+|.|+++++..+...|++|..... |..++..|.|++|+|.||+....+
T Consensus        14 isr~~a~~~L~~~~~GtFLvR~S~~s~~G~~tis~~~~~~~~~~~i~~~~p-~t~~dl~~~sL~dlI~~y~~~~~~   88 (141)
T d1bg1a3          14 ISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP-YTKQQLNNMSFAEIIMGYKIMDAT   88 (141)
T ss_dssp             CCTTGGGTTTTTSCTTCBCEEECSSCSSCCEEECCCCSSSCSSCCCCCCCC-BCGGGGTSSCHHHHTTSCCCBCTT
T ss_pred             CCHHHHHHHhhCCCCCeEEEEecCCccCCCEEEEEEecCcCCceEEeecCC-eecCccccCCHHHHHHhhhhhccc
Confidence            78999655554 469999999998 45899999999999899998864333 555667899999999999765543

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=3.9e-05  Score=45.65  Aligned_cols=65  Identities=20%  Similarity=0.219  Sum_probs=40.1

Q ss_pred             CChHHHHhccc-CCCCcEEEEeeCCC-CCCEEEEEEeC----CeEEEEEEECCCCeEEeCCcccCCHHHHHHHHh
Q psy8455           1 MSRIAKTAFPS-RQDGDFLVRESQGS-PGQYVLTGYQG----GTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHC   69 (101)
Q Consensus         1 isR~~a~~~Ll-~~~G~FLvR~s~~~-~g~~~Lsv~~~----~~~~h~~I~~~~~~~~~~~~~F~sl~~LI~~y~   69 (101)
                      |+|++|.+.|. +.+|+||+|-|++. +|..++++...    +...+..|+    -|....-.=.|++|.|..|.
T Consensus        14 IsK~~a~~~L~~~~~GTFLLRFSdS~~~GgitiawV~~~~~~~~~~v~~lq----P~t~kdl~~~sLad~Ird~~   84 (142)
T d1bf5a3          14 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVE----PYTKKELSAVTFPDIIRNYK   84 (142)
T ss_dssp             CCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSSSCCCCEECC----CBCHHHHHSSCHHHHHHTCC
T ss_pred             ecHHHHHHHhhCCCCceEEEEeccCccCCceEEEEEEecCCCCceeEEeeC----CCchhhhccCCHHHHHHHHH
Confidence            68999665555 46899999999976 58888888642    122222221    01111112358889887764

>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Cbl
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.58  E-value=0.24  Score=25.88  Aligned_cols=32  Identities=19%  Similarity=0.173  Sum_probs=24.4

Q ss_pred             HHHHhccc---CCCCcEEEEeeCCCCCCEEEEEEe
Q psy8455           4 IAKTAFPS---RQDGDFLVRESQGSPGQYVLTGYQ   35 (101)
Q Consensus         4 ~~a~~~Ll---~~~G~FLvR~s~~~~g~~~Lsv~~   35 (101)
                      +|...+|.   .++|+|+.|-|++.-|++++-...
T Consensus        12 Devk~rL~~~~~kPGSYiFRlSCTrlGQWAIGyvt   46 (88)
T d3buxb3          12 DEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVT   46 (88)
T ss_dssp             HHHHHHHGGGTTSTTEEEEEECSSSTTSEEEEEEC
T ss_pred             HHHHHHHHHHhcCCCceEEeeccccccceeeeeec
Confidence            44344443   579999999999999999887655

>d2w0pa1 b.1.18.10 (A:2237-2328) Filamin a {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.95  E-value=0.65  Score=24.50  Aligned_cols=26  Identities=23%  Similarity=0.267  Sum_probs=21.1

Q ss_pred             CCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          13 QDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        13 ~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      .+|.|.|+-....+|.|.++|++++.
T Consensus        53 ~dg~y~v~ytP~~~G~y~i~V~~~g~   78 (92)
T d2w0pa1          53 KDGSCGVAYVVQEPGDYEVSVKFNEE   78 (92)
T ss_dssp             TTSCEEEEEECSSCEEEEEEEEETTE
T ss_pred             CCCEEEEEEEECCCceEEEEEEECCE
Confidence            57888888888888888888888653

>d1wlha1 b.1.18.10 (A:547-647) F-actin cross-linking gelation factor (ABP-120) repeats {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: F-actin cross-linking gelation factor (ABP-120) repeats
species: Dictyostelium discoideum [TaxId: 44689]

Probab=83.28  E-value=0.76  Score=24.28  Aligned_cols=26  Identities=27%  Similarity=0.405  Sum_probs=21.9

Q ss_pred             CCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          13 QDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        13 ~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      .+|.|.|+-....+|.|.|+|.+++.
T Consensus        63 ~dGty~v~y~p~~~G~y~i~V~~~g~   88 (101)
T d1wlha1          63 GDGTYDVEFEPKEAGDYVINLTLDGD   88 (101)
T ss_dssp             SSSEEEEEECCCSCSEEEEEEEESSS
T ss_pred             CCCeEEEEEEeCCCccEEEEEEECCE
Confidence            58999999888888999999988653

>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.34  E-value=0.97  Score=23.91  Aligned_cols=27  Identities=26%  Similarity=0.377  Sum_probs=21.1

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|.|.|+-.....|.|.|.|++++.
T Consensus        54 ~~dg~y~v~y~P~~~G~y~i~V~~~g~   80 (98)
T d2dica1          54 NKDGSCSAEYIPFAPGDYDVNITYGGA   80 (98)
T ss_dssp             CSSSCEEEEECCSSCEEEEEEEEETTE
T ss_pred             CCCCEEEEEEEECCCceEEEEEEECCE
Confidence            357888888887778888888888653

>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.07  E-value=1.2  Score=23.60  Aligned_cols=25  Identities=24%  Similarity=0.364  Sum_probs=20.8

Q ss_pred             CCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          13 QDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        13 ~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      .+|.|.|+-....+|.|.+++.+++
T Consensus        55 ~dg~y~v~y~P~~~G~y~i~V~~~g   79 (98)
T d2di8a1          55 EDGTCKVSYFPTVPGVYIVSTKFAD   79 (98)
T ss_dssp             TTSCEEEEECCCSCSEEEEEEEESS
T ss_pred             CCCEEEEEEEECCCceEEEEEEECC
Confidence            5789999888888889999998864

>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.26  E-value=1.1  Score=23.61  Aligned_cols=27  Identities=33%  Similarity=0.487  Sum_probs=20.6

Q ss_pred             CCCCcEEEEeeCCCCCCEEEEEEeCCe
Q psy8455          12 RQDGDFLVRESQGSPGQYVLTGYQGGT   38 (101)
Q Consensus        12 ~~~G~FLvR~s~~~~g~~~Lsv~~~~~   38 (101)
                      ..+|.|.|+-.....|.|.|++++++.
T Consensus        56 ~~dg~y~v~y~P~~~G~h~i~V~~~g~   82 (100)
T d2diaa1          56 NKDGTYAVTYVPLTAGMYTLTMKYGGE   82 (100)
T ss_dssp             CTTSEEEEEEECSSCEEEEEEEEETTE
T ss_pred             CCCCEEEEEEEeCcCccEEEEEEECCE
Confidence            357888888777777888888887654

>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.20  E-value=0.87  Score=24.25  Aligned_cols=25  Identities=20%  Similarity=0.313  Sum_probs=20.1

Q ss_pred             CCCcEEEEeeCCCCCCEEEEEEeCC
Q psy8455          13 QDGDFLVRESQGSPGQYVLTGYQGG   37 (101)
Q Consensus        13 ~~G~FLvR~s~~~~g~~~Lsv~~~~   37 (101)
                      .+|.|.|+-....+|.|.|.+++++
T Consensus        58 ~dG~y~v~y~P~~~G~y~i~V~~~g   82 (101)
T d2dj4a1          58 GDGTHTVTYTPSQEGPYMVSVKYAD   82 (101)
T ss_dssp             SSSEEEEEECCSSCEEEEEEEEESS
T ss_pred             CCCEEEEEEEeCCCeeEEEEEEECC
Confidence            4788888888777888888888864