Psyllid ID: psy8484

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
Protein Sequence
MIGVPRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL
Secondary Structure (PSIPRED)
cccccEEEEEEEEEcEEEEEEccEEEEccEEccccccEEEEEEEccccccEEEEccccEEcccccccccccccccccccccccEEcccccEEccccccccccccccccccccccccccEEcccccEEccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccEEEEEcccEEEccccccccccccEEEEEEEEEEEEEEcccEEEEcccccccccccEcEcccccccccEEccccEEEcccccEEcccccccccccccccccccEEcccccEEccccc
Coil and Loop (DISEMBL)
migvprtrtktipipytetymdeycmrqswyftyhcqktrtaysykykteeymedTHVRICCegyeddhgscrpvcerecvfgsctspnqctcspgyvvineaspnicephcaecvngvcsapntcdcldvl
Flexible Loop (DISEMBL)
migvprtrtktipipytetYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL
Low Complexity Region (SEG)
MIGVPRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL
Disordered region (IsUnstruct)
**********TIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLD**
Disordered Region (DISOPRED)
****PRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL
Disordered Region (DISEMBL)
********TKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL
Disordered Region (DISPRO)
*IGVPRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCL*VL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIGVPRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	132	2.2.26 [Sep-21-2011]
Q8VIK5	1034	Platelet endothelial aggr	yes	N/A	0.674	0.086	0.344	4e-08
Q5VY43	1037	Platelet endothelial aggr	yes	N/A	0.734	0.093	0.306	2e-06
Q96KG7	1140	Multiple epidermal growth	no	N/A	0.901	0.104	0.289	1e-05
Q6DIB5	1147	Multiple epidermal growth	no	N/A	0.795	0.091	0.279	3e-05
A0JM12	1114	Multiple epidermal growth	no	N/A	0.840	0.099	0.3	3e-05
Q80T91	1091	Multiple epidermal growth	no	N/A	0.848	0.102	0.289	9e-05
A6BM72	1044	Multiple epidermal growth	no	N/A	0.848	0.107	0.289	0.0001
Q6GUQ1	293	Epidermal growth factor-l	no	N/A	0.878	0.395	0.282	0.0003
Q6MG84	291	Epidermal growth factor-l	no	N/A	0.681	0.309	0.281	0.0006

>sp|Q8VIK5|PEAR1_MOUSE Platelet endothelial aggregation receptor 1 OS=Mus musculus GN=Pear1 PE=1 SV=1

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 23  EYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVF 82
           E C R  W   + C +    Y   Y+    M+      CC GY +  G+C P+C +ECV 
Sbjct: 51  ESCHR-PWEDPHTCAQPTVVYRTVYRQVVKMDSRPRLQCCRGYYESRGACVPLCAQECVH 109

Query: 83  GSCTSPNQCTCSPGYVVIN---EASPNICEPHC 112
           G C +PNQC C+PG+   +   E +P +  P C
Sbjct: 110 GRCVAPNQCQCAPGWRGGDCSSECAPGMWGPQC 142

When overexpressed, reduces the number of both early and late non-adherent myeloid progenitor cells.
Mus musculus (taxid: 10090)

>sp|Q5VY43|PEAR1_HUMAN Platelet endothelial aggregation receptor 1 OS=Homo sapiens GN=PEAR1 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 28  QSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTS 87
           + W   + C +    Y   Y+     +      CC G+ +  G C P+C +ECV G C +
Sbjct: 57  RPWEGPHTCPQPTVVYRTVYRQVVKTDHRQRLQCCHGFYESRGFCVPLCAQECVHGRCVA 116

Query: 88  PNQCTCSPGYV---VINEASPNICEPHCAE---CVN--------GVCSAPN 124
           PNQC C PG+      +E +P +  P C +   C N        GVCS P+
Sbjct: 117 PNQCQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPS 167

When overexpressed, reduces the number of both early and late non-adherent myeloid progenitor cells.

Homo sapiens (taxid: 9606)

>sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like domains protein 10 OS=Homo sapiens GN=MEGF10 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 9/128 (7%)

Query: 7   TRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYE 66
           T  ++ P P+ + Y        +W+    C + R +Y   Y+  E         CC G+ 
Sbjct: 43  TVQESYPHPFDQIYYTSCTDILNWF---KCTRHRVSYRTAYRHGEKTMYRRKSQCCPGFY 99

Query: 67  DDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASP---NICEPHCA---ECVNGVC 120
           +    C P C  +CV G C +PN C C PG+   N +S    +   PHC    +C NG  
Sbjct: 100 ESGEMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCTSRCQCKNGAL 159

Query: 121 SAPNTCDC 128
             P T  C
Sbjct: 160 CNPITGAC 167

Membrane receptor involved in phagocytosis by macrophages of apoptotic cells. Cooperates with ABCA1 within the process of engulfment. Promotes the formation of large intracellular vacuoles and may be responsible for the uptake of amyloid-beta peptides. May also function in the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements. May play role in cell adhesion and motility. Is also an essential factor in the regulation of myogenesis. Controls the balance between skeletal muscle satellite cells proliferation and differentiation problably through regulation of the notch signaling pathway.

Homo sapiens (taxid: 9606)

>sp|Q6DIB5|MEG10_MOUSE Multiple epidermal growth factor-like domains protein 10 OS=Mus musculus GN=Megf10 PE=1 SV=1

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 7   TRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYE 66
           T  ++ P P+ + Y        +W+    C + R +Y   Y+  E         CC G+ 
Sbjct: 43  TVQESYPHPFDQIYYTSCTDILNWF---KCTRHRISYRTAYRHGEKTMYRRKSQCCPGFY 99

Query: 67  DDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASP---NICEPHCAE 114
           +    C P C  +CV G C +PN C C PG+   N +S    +   PHC+ 
Sbjct: 100 ESRDMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSS 150

Membrane receptor involved in phagocytosis by macrophages of apoptotic cells. Cooperates with ABCA1 within the process of engulfment. Promotes the formation of large intracellular vacuoles and may be responsible for the uptake of amyloid-beta peptides. May also function in the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements. May play role in cell adhesion and motility. Is also an essential factor in the regulation of myogenesis. Controls the balance between skeletal muscle satellite cells proliferation and differentiation problably through regulation of the notch signaling pathway.

Mus musculus (taxid: 10090)

>sp|A0JM12|MEG10_XENTR Multiple epidermal growth factor-like domains protein 10 OS=Xenopus tropicalis GN=megf10 PE=2 SV=1

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 9/120 (7%)

Query: 15  PYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRP 74
           PY + Y        +W+    C + R +Y   Y+  E         CC G+ +    C P
Sbjct: 50  PYDQVYYTSCTDILNWF---KCTRHRISYRTAYRRGEKTMYRRKSQCCPGFYESREMCVP 106

Query: 75  VCERECVFGSCTSPNQCTCSPGYVVINEASP---NICEPHCA---ECVNGVCSAPNTCDC 128
            C  +CV G C +PN C C PG+   N +S    +   PHC+   +C NG    P T  C
Sbjct: 107 HCADKCVHGRCIAPNTCQCEPGWGGPNCSSACDVDHWGPHCSSRCQCKNGALCNPITGAC 166

Membrane receptor involved in phagocytosis. May also regulate homotypic retinal neuron repulsion. May play role in cell adhesion and motility. May also be an essential factor in the regulation of myogenesis, controlling the balance between skeletal muscle satellite cells proliferation and differentiation.

Xenopus tropicalis (taxid: 8364)

>sp|Q80T91|MEG11_MOUSE Multiple epidermal growth factor-like domains protein 11 OS=Mus musculus GN=Megf11 PE=1 SV=3

 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 15  PYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRP 74
           P+ + Y        +W+    C + R +Y   Y+            CC GY ++   C P
Sbjct: 44  PFDQIYYTRCADILNWF---KCTRHRISYKTAYRRGLRTMYRRRSQCCPGYYENGDFCIP 100

Query: 75  VCERECVFGSCTSPNQCTCSPGYVVINEASPNICE---PHCA---ECVNGVCSAPNTCDC 128
           +C  EC+ G C SP+ C C PG+   + +S    E   PHC+   +C NG    P T  C
Sbjct: 101 LCTEECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQNGALCNPITGAC 160

Query: 129 L 129
           +
Sbjct: 161 V 161

May regulate the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements.

Mus musculus (taxid: 10090)

>sp|A6BM72|MEG11_HUMAN Multiple epidermal growth factor-like domains protein 11 OS=Homo sapiens GN=MEGF11 PE=2 SV=3

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 15  PYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRP 74
           P+ + Y        +W+    C + R +Y   Y+            CC GY +    C P
Sbjct: 45  PFDQIYYTRCTDILNWF---KCTRHRISYKTAYRRGLRTMYRRRSQCCPGYYESGDFCIP 101

Query: 75  VCERECVFGSCTSPNQCTCSPGYVVINEAS---PNICEPHCA---ECVNGVCSAPNTCDC 128
           +C  ECV G C SP+ C C PG+   + +S    +   PHC+   +C NG    P T  C
Sbjct: 102 LCTEECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNGALCNPITGAC 161

Query: 129 L 129
           +
Sbjct: 162 V 162

May regulate the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements.

Homo sapiens (taxid: 9606)

>sp|Q6GUQ1|EGFL8_MOUSE Epidermal growth factor-like protein 8 OS=Mus musculus GN=Egfl8 PE=2 SV=2

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 29/145 (20%)

Query: 2   IGVPRTRTKTIPIPYTETYMDEYCMRQSWYFTYH--------CQKTRTAYSYKYK-TEEY 52
           +GV   +T  +P+ Y E+Y       Q  Y  Y         C   RT Y   ++     
Sbjct: 35  LGVCSKQTLLVPLRYNESY------SQPVYKPYLTLCAGRRICSTYRTTYRVAWREVRRE 88

Query: 53  MEDTHVRICCEGYEDDHG---SCRPVCERECVFGS-CTSPNQCTCSPGY------VVINE 102
           +  THV +CC+G++  H    +C  +C + C+ G  CT P++C C+PG+      V ++E
Sbjct: 89  VPQTHV-VCCQGWKKPHPGALTCDAICSKPCLNGGVCTGPDRCECAPGWGGKHCHVDVDE 147

Query: 103 --ASPNICEPHCAECVNG-VCSAPN 124
             AS  +C   C   +   +CS P+
Sbjct: 148 CRASLTLCSHGCLNTLGSFLCSCPH 172

Mus musculus (taxid: 10090)

>sp|Q6MG84|EGFL8_RAT Epidermal growth factor-like protein 8 OS=Rattus norvegicus GN=Egfl8 PE=2 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 20/110 (18%)

Query: 2   IGVPRTRTKTIPIPYTETYMDEYCMRQSWYFTYH--------CQKTRTAYSYKYK-TEEY 52
           +GV   +T  +P+ Y E+Y       Q  Y  Y         C   RT Y   ++     
Sbjct: 34  LGVCSKQTLLVPLRYNESY------SQPVYRPYLTLCAGRRICSTYRTTYRVAWREVRRE 87

Query: 53  MEDTHVRICCEGYEDDHG---SCRPVCERECVFGS-CTSPNQCTCSPGYV 98
           ++ THV +CC+G++  H    +C  +C + C+ G  C  P+QC C+ G+ 
Sbjct: 88  VQQTHV-VCCQGWKKPHPGALTCEAICSKPCLNGGVCAGPDQCECASGWA 136

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
170047324	772	conserved hypothetical protein [Culex qu	0.810	0.138	0.416	6e-12
170044674	1363	conserved hypothetical protein [Culex qu	0.833	0.080	0.408	2e-11
170047453	243	conserved hypothetical protein [Culex qu	0.886	0.481	0.369	9e-10
383866271	2054	PREDICTED: uncharacterized protein LOC10	0.575	0.037	0.487	1e-09
340726449	2219	PREDICTED: hypothetical protein LOC10064	0.856	0.050	0.365	2e-09
195115802	244	GI12725 [Drosophila mojavensis] gi|19391	0.522	0.282	0.464	3e-09
198473238	706	GA14817 [Drosophila pseudoobscura pseudo	0.530	0.099	0.493	3e-09
328780327	805	PREDICTED: nimrod C2 [Apis mellifera]	0.863	0.141	0.388	1e-08
307191598	1352	Putative EGF-like domain-containing prot	0.840	0.082	0.365	1e-08
157117458	1285	hypothetical protein AaeL_AAEL007967 [Ae	0.590	0.060	0.443	2e-08

>gi|170047324|ref|XP_001851176.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167869762|gb|EDS33145.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 66/120 (55%), Gaps = 13/120 (10%)

Query: 15  PYTETYMDEYCMRQSW-----YFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDH 69
           PY  ++ DEY  R S      +F  H ++    Y  K     Y+ ++ + +CCEGY D  
Sbjct: 24  PYVNSW-DEYVSRYSTCSYECFFISHHKQVHFGYYTKSCELAYLTESRL-VCCEGYFDYG 81

Query: 70  GSCRPVCERECVFGSCTSPNQCTCSPGYV-VINEASPNICEPHCAECVNGVCSAPNTCDC 128
           G C PVC+  C  G CT P+QCTC+ GYV V+NE     C+P C+ C NG C APN C C
Sbjct: 82  GDCYPVCKSGCPNGRCTGPDQCTCNEGYVNVLNE-----CKPKCSSCENGRCVAPNECVC 136

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170044674|ref|XP_001849964.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167867729|gb|EDS31112.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 64/125 (51%), Gaps = 15/125 (12%)

Query: 11  TIPIPYTETYMDEYCMRQS------WYFTYHCQKTRTAYSYKYKTEEYMEDTHVRI-CCE 63
            +  PY  +  D+Y  RQS      W   Y+   T+    Y  K+ E    T  ++ CCE
Sbjct: 25  NVKTPYVNS-RDQYVSRQSTCSYKCWTGWYN---TQVNSGYYTKSCELAYLTEAKLACCE 80

Query: 64  GYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAP 123
           GY D  G C PVC+  C  G CT P+QCTC+ GYV +     N CEP C+ C NG C AP
Sbjct: 81  GYFDYGGDCYPVCKSGCPNGRCTGPDQCTCNEGYVKVR----NECEPKCSSCENGRCVAP 136

Query: 124 NTCDC 128
           N C C
Sbjct: 137 NECVC 141

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047453|ref|XP_001851235.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167869902|gb|EDS33285.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 13/130 (10%)

Query: 1   MIGVPR-TRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVR 59
           ++ VP+  + KT  + YT      YCM             +   + +Y+T +       +
Sbjct: 49  VVEVPKLVQNKTKGVEYTTCSY--YCMFGEHSIPLAVTVDKLTCALEYETRQK------Q 100

Query: 60  ICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHC-AECVNG 118
           +CCEGY      C P C R+CVFG CT+P  CTC  GY  +NE    +CEP C + C NG
Sbjct: 101 VCCEGYHRSGSDCLPTCTRKCVFGECTAPEVCTCYEGYSKVNEY---LCEPVCESGCENG 157

Query: 119 VCSAPNTCDC 128
            C APNTC C
Sbjct: 158 RCVAPNTCVC 167

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866271|ref|XP_003708594.1| PREDICTED: uncharacterized protein LOC100879168 [Megachile rotundata]

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 4/80 (5%)

Query: 55  DTHVRICCEGYED---DHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPH 111
           + +V  C +GYE    D  SC P CE  C FG+CT+PN C C PGY + N++  N+CEP 
Sbjct: 804 EPNVCACHDGYEPNPRDKFSCEPRCENGCSFGTCTAPNVCICEPGYRLNNQSRENVCEPI 863

Query: 112 CAE-CVNGVCSAPNTCDCLD 130
           C+E C  G C AP TC C+D
Sbjct: 864 CSEPCTMGRCVAPETCSCVD 883

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726449|ref|XP_003401570.1| PREDICTED: hypothetical protein LOC100644464 [Bombus terrestris]

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 4    VPRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCE 63
            V  +R +   +PYTETY      R   +  ++  KTRT Y  +Y+T    E    + CC 
Sbjct: 1547 VSFSRREERFVPYTETY------RARKWGLFYVIKTRTNYRSEYRTTWVTE----KKCCS 1596

Query: 64   GYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHC-AECVNGVCSA 122
            GY  +   C PVC   C+ G C  PN C C  G+   ++    +CEP C   C NGVC +
Sbjct: 1597 GYVKNDNVCVPVCSVPCINGRCVKPNTCECEQGFS--HQYLSFLCEPVCEGNCTNGVCQS 1654

Query: 123  PNTCDC 128
            PN C C
Sbjct: 1655 PNKCMC 1660

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195115802|ref|XP_002002445.1| GI12725 [Drosophila mojavensis] gi|193913020|gb|EDW11887.1| GI12725 [Drosophila mojavensis]

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 60  ICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEA--SPNICEPHCAECVN 117
           +CC+GYE   G CRP C   CV   CT+P QCTC  GY +++E   S   C+P C  C N
Sbjct: 48  VCCKGYEGTPGGCRPRCNPRCVHAQCTAPQQCTCDLGYEILSEQEFSNAGCQPKCHACRN 107

Query: 118 GVCSAPNTCDC 128
           G C +P  C C
Sbjct: 108 GDCISPGRCRC 118

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198473238|ref|XP_001356220.2| GA14817 [Drosophila pseudoobscura pseudoobscura] gi|198139366|gb|EAL33280.2| GA14817 [Drosophila pseudoobscura pseudoobscura]

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 61  CCEGYEDD--HGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHC-AECVN 117
           C EGYED   H  C P C   C  G C++P QC C+PG+VV N + P+IC+P C  +C+N
Sbjct: 516 CLEGYEDTRLHYQCVPSCRPRCENGRCSAPGQCDCNPGHVVTNSSKPHICQPQCEQQCIN 575

Query: 118 GVCSAPNTCDCLD 130
             C  P TC CLD
Sbjct: 576 AECLRPETCVCLD 588

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780327|ref|XP_394098.4| PREDICTED: nimrod C2 [Apis mellifera]

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 62/126 (49%), Gaps = 12/126 (9%)

Query: 4   VPRTRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCE 63
           V  +R  +  +PYTETY       + W F +H  K RT Y   +      E+     CC+
Sbjct: 29  VQVSRMVSRYVPYTETYK-----VKKWTF-FHQTKFRTNYRIDHVPVWKFEER----CCD 78

Query: 64  GYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHC-AECVNGVCSA 122
           GYE+ +  C PVC   CV G CT PN C C  GY   +E     C P C + C NGVC+ 
Sbjct: 79  GYEERYDVCEPVCNPGCVNGRCTRPNSCECHIGYSP-SEYDQYTCLPVCESHCPNGVCTN 137

Query: 123 PNTCDC 128
           PN C C
Sbjct: 138 PNQCSC 143

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191598|gb|EFN75095.1| Putative EGF-like domain-containing protein FLJ14712 [Harpegnathos saltator]

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 12/123 (9%)

Query: 7   TRTKTIPIPYTETYMDEYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYE 66
           TR  +  +PYTETY       +SW+F     KTR  Y  +Y T    E    R CC+GY 
Sbjct: 686 TRLISQYVPYTETYR-----AKSWFFYR--IKTRQNYRLEYHTIHTTE----RNCCKGYR 734

Query: 67  DDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAE-CVNGVCSAPNT 125
                C+P C   C    C +PN C C+ GY      +   C+P CA  CV G C  P+ 
Sbjct: 735 KVGSLCKPYCATPCEKAVCVAPNTCMCNVGYQTAEGTNGTKCQPVCANGCVKGTCVEPDI 794

Query: 126 CDC 128
           C+C
Sbjct: 795 CEC 797

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157117458|ref|XP_001658777.1| hypothetical protein AaeL_AAEL007967 [Aedes aegypti] gi|108876062|gb|EAT40287.1| AAEL007967-PA [Aedes aegypti]

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 51  EYMEDTHVRICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEP 110
           E +  T    C +GYE+ +G+C P+C++ECV G C++PNQC C  GY   N    N+C+P
Sbjct: 519 EKVSTTTPEPCEQGYEEINGTCVPICDKECVNGECSAPNQCECFEGYSSENSTDYNLCQP 578

Query: 111 HCAE-CVNGVCSAPNTCDC 128
            C+  C NG C AP  C C
Sbjct: 579 VCSNGCQNGNCIAPGKCIC 597

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
FB|FBgn0028939	701	nimC2 "nimrod C2" [Drosophila	0.522	0.098	0.472	4.4e-14
FB|FBgn0028543	421	nimB2 "nimrod B2" [Drosophila	0.507	0.159	0.492	7.2e-14
MGI|MGI:1920432	1034	Pear1 "platelet endothelial ag	0.787	0.100	0.347	1.2e-12
FB|FBgn0260011	377	nimC4 "nimrod C4" [Drosophila	0.628	0.220	0.413	1.9e-12
FB|FBgn0259896	620	nimC1 "nimrod C1" [Drosophila	0.492	0.104	0.472	1.9e-12
FB|FBgn0243514	1054	eater "eater" [Drosophila mela	0.492	0.061	0.485	1.9e-12
UNIPROTKB|A6PVP2	173	PEAR1 "Platelet endothelial ag	0.787	0.601	0.321	2.4e-12
RGD|1305653	1033	Pear1 "platelet endothelial ag	0.765	0.097	0.330	8.2e-12
UNIPROTKB|Q5VY43	1037	PEAR1 "Platelet endothelial ag	0.787	0.100	0.321	5.9e-11
FB|FBgn0027929	402	nimB1 "nimrod B1" [Drosophila	0.492	0.161	0.422	7.5e-11

FB|FBgn0028939 nimC2 "nimrod C2" [Drosophila melanogaster (taxid:7227)]

 Score = 192 (72.6 bits), Expect = 4.4e-14, P = 4.4e-14
 Identities = 34/72 (47%), Positives = 38/72 (52%)

Query:    61 CCEGYEDDHG--SCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAE-CVN 117
             C  GYED      C P C   C  G C+SP  C C PG+VV N + PN C P C E C+N
Sbjct:   514 CFAGYEDTKVPYECVPSCRPRCENGRCSSPGHCECDPGHVVTNSSEPNSCRPQCQEQCIN 573

Query:   118 GVCSAPNTCDCL 129
               C AP  C CL
Sbjct:   574 AECVAPEKCACL 585

GO:0006909 "phagocytosis" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISM

FB|FBgn0028543 nimB2 "nimrod B2" [Drosophila melanogaster (taxid:7227)]

 Score = 186 (70.5 bits), Expect = 7.2e-14, P = 7.2e-14
 Identities = 35/71 (49%), Positives = 41/71 (57%)

Query:    61 CCEGYEDDHGS--CRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAE-CVN 117
             C  G+E D  S  C P C+  C+ G C   NQC C  GYV  +E   NIC+PHC + C N
Sbjct:   334 CASGFEWDRKSAECLPKCDLPCLNGVCVGNNQCDCKTGYVR-DEHQRNICQPHCPQGCQN 392

Query:   118 GVCSAPNTCDC 128
             G CSAPN C C
Sbjct:   393 GYCSAPNFCIC 403

GO:0007498 "mesoderm development" evidence=IEP

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0042742 "defense response to bacterium" evidence=ISS

GO:0051635 "bacterial cell surface binding" evidence=ISS

MGI|MGI:1920432 Pear1 "platelet endothelial aggregation receptor 1" [Mus musculus (taxid:10090)]

 Score = 181 (68.8 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 40/115 (34%), Positives = 55/115 (47%)

Query:    23 EYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRI-CCEGYEDDHGSCRPVCERECV 81
             E C R  W   + C +    Y   Y+    M D+  R+ CC GY +  G+C P+C +ECV
Sbjct:    51 ESCHRP-WEDPHTCAQPTVVYRTVYRQVVKM-DSRPRLQCCRGYYESRGACVPLCAQECV 108

Query:    82 FGSCTSPNQCTCSPGYV---VINEASPNICEPHC---AECVNGVCSAPN--TCDC 128
              G C +PNQC C+PG+      +E +P +  P C     C N     P   TC C
Sbjct:   109 HGRCVAPNQCQCAPGWRGGDCSSECAPGMWGPQCDKFCHCGNNSSCDPKSGTCFC 163

GO:0001891 "phagocytic cup" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IMP;IDA

FB|FBgn0260011 nimC4 "nimrod C4" [Drosophila melanogaster (taxid:7227)]

 Score = 172 (65.6 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 38/92 (41%), Positives = 49/92 (53%)

Query:    47 YKTEEYMEDTH--VRICCEGY-EDDHGSCRPVCEREC-VFGSCTSPNQCTCSPGYVVI-- 100
             Y +EE  + TH  VR CC GY + + G C P+C R C    SC +P++C C  GYV    
Sbjct:    62 YDSEEE-QVTHRLVRECCPGYLQVESGLCEPICSRGCPAHASCAAPDRCECISGYVSARN 120

Query:   101 NEASPNICEPHC-AECVNGV-CSAPNTCDCLD 130
             ++   + CEP C   C  G  C  PNTC C D
Sbjct:   121 HQDGSHYCEPICETPCPAGAQCVTPNTCACRD 152

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0006909 "phagocytosis" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISM

GO:0043277 "apoptotic cell clearance" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

FB|FBgn0259896 nimC1 "nimrod C1" [Drosophila melanogaster (taxid:7227)]

 Score = 176 (67.0 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/74 (47%), Positives = 43/74 (58%)

Query:    60 IC-CE-GYEDDHG--SCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAEC 115
             +C CE GY  D G  +CRPVC      G C SP  C C PGYV+ N+    +C+PHC +C
Sbjct:   225 VCECENGYAGDDGGTNCRPVCSTCPENGLCLSPGVCVCKPGYVMRND----LCQPHCEKC 280

Query:   116 V-NGVCSAPNTCDC 128
               N  C APN C+C
Sbjct:   281 SDNAHCVAPNQCEC 294

GO:0017147 "Wnt-protein binding" evidence=ISS

GO:0016055 "Wnt receptor signaling pathway" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISM

GO:0006909 "phagocytosis" evidence=IMP

FB|FBgn0243514 eater "eater" [Drosophila melanogaster (taxid:7227)]

 Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/70 (48%), Positives = 41/70 (58%)

Query:    61 CCEGYEDD-HGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAE-CVNG 118
             C + YE D  G+C P+CE  CV G+CT+P+ C C  GY  I     N+C   C E C NG
Sbjct:   217 CNKFYEKDIDGNCVPICENGCVNGNCTAPDVCQCLTGYTKIGH---NVCLAVCPEGCQNG 273

Query:   119 VCSAPNTCDC 128
             VC APN C C
Sbjct:   274 VCVAPNECSC 283

GO:0006910 "phagocytosis, recognition" evidence=IMP

GO:0051635 "bacterial cell surface binding" evidence=IDA

GO:0051637 "Gram-positive bacterial cell surface binding" evidence=IDA

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|A6PVP2 PEAR1 "Platelet endothelial aggregation receptor 1" [Homo sapiens (taxid:9606)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 37/115 (32%), Positives = 52/115 (45%)

Query:    23 EYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRI-CCEGYEDDHGSCRPVCERECV 81
             E C R  W   + C +    Y   Y+ +    D   R+ CC G+ +  G C P+C +ECV
Sbjct:    53 EPCERP-WEGPHTCPQPTVVYRTVYR-QVVKTDHRQRLQCCHGFYESRGFCVPLCAQECV 110

Query:    82 FGSCTSPNQCTCSPGYV---VINEASPNICEPHC---AECVNGVCSAPNT--CDC 128
              G C +PNQC C PG+      +E +P +  P C     C N     P +  C C
Sbjct:   111 HGRCVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSC 165

GO:0001891 "phagocytic cup" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

RGD|1305653 Pear1 "platelet endothelial aggregation receptor 1" [Rattus norvegicus (taxid:10116)]

 Score = 173 (66.0 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/109 (33%), Positives = 55/109 (50%)

Query:    23 EYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRI-CCEGYEDDHGSCRPVCERECV 81
             E C R  W   + C +    Y   Y+    M D+  R+ CC GY +  G+C P+C +ECV
Sbjct:    51 ESCDRP-WEDPHTCAQPTVVYRTVYRQVVKM-DSRPRLQCCGGYYESSGACVPLCAQECV 108

Query:    82 FGSCTSPNQCTCSPGYV---VINEASPNICEPHCAECVNGVCSAPNTCD 127
              G C +PN+C C+PG+      +E +P +  P C      +C   ++CD
Sbjct:   109 HGRCVAPNRCQCAPGWRGDDCSSECAPGMWGPQCDRLC--LCGNSSSCD 155

GO:0001891 "phagocytic cup" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0043654 "recognition of apoptotic cell" evidence=IEA;ISO

UNIPROTKB|Q5VY43 PEAR1 "Platelet endothelial aggregation receptor 1" [Homo sapiens (taxid:9606)]

 Score = 165 (63.1 bits), Expect = 5.9e-11, P = 5.9e-11
 Identities = 37/115 (32%), Positives = 52/115 (45%)

Query:    23 EYCMRQSWYFTYHCQKTRTAYSYKYKTEEYMEDTHVRI-CCEGYEDDHGSCRPVCERECV 81
             E C R  W   + C +    Y   Y+ +    D   R+ CC G+ +  G C P+C +ECV
Sbjct:    53 EPCERP-WEGPHTCPQPTVVYRTVYR-QVVKTDHRQRLQCCHGFYESRGFCVPLCAQECV 110

Query:    82 FGSCTSPNQCTCSPGYV---VINEASPNICEPHC---AECVNGVCSAPNT--CDC 128
              G C +PNQC C PG+      +E +P +  P C     C N     P +  C C
Sbjct:   111 HGRCVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSC 165

GO:0016021 "integral to membrane" evidence=IEA

GO:0001891 "phagocytic cup" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

FB|FBgn0027929 nimB1 "nimrod B1" [Drosophila melanogaster (taxid:7227)]

 Score = 158 (60.7 bits), Expect = 7.5e-11, P = 7.5e-11
 Identities = 30/71 (42%), Positives = 38/71 (53%)

Query:    61 CCEGYE--DDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHC-AECVN 117
             C  GY    D G C+PVC  +C FG C +PNQC C  G+  I   + N+CE  C   C N
Sbjct:   198 CSPGYRRTPDLG-CQPVCAPDCGFGKCVAPNQCECFAGF--IKRPNWNVCEAECYLNCEN 254

Query:   118 GVCSAPNTCDC 128
             G+C +   C C
Sbjct:   255 GLCESRYKCHC 265

GO:0051635 "bacterial cell surface binding" evidence=ISS

GO:0042742 "defense response to bacterium" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	132
PF07546	72	EMI: EMI domain; InterPro: IPR011489 The EMI domai	98.87
KOG1225|consensus	525		98.8
KOG1225|consensus	525		98.47
KOG4289|consensus	2531		97.77
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.21
KOG1226|consensus	783		97.19
KOG1219|consensus	4289		97.04
KOG1214|consensus	1289		96.68
KOG1219|consensus	4289		95.9
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	95.88
smart00051	63	DSL delta serrate ligand.	95.6
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.5
KOG1226|consensus	783		95.33
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	95.28
KOG4289|consensus	2531		94.79
smart00051	63	DSL delta serrate ligand.	93.26
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	90.68
KOG1214|consensus	1289		88.13
KOG1217|consensus	487		87.37
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	86.39
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	86.2
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	83.3
cd00053	36	EGF Epidermal growth factor domain, found in epide	82.23
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	80.05
KOG1217|consensus	487		80.01

>PF07546 EMI: EMI domain; InterPro: IPR011489 The EMI domain, first named after its presence in proteins of the EMILIN family, is a small cysteine-rich module of around 75 amino acids

Probab=98.87  E-value=5.5e-09  Score=68.05  Aligned_cols=65  Identities=22%  Similarity=0.355  Sum_probs=50.0

Q ss_pred             cCCCCCeeeEEece-eeeeeeeeeee-eeeee-e-ecCCcceeEEEEEeeeeeeecCCCceEeCCCceeC
Q psy8484           3 GVPRTRTKTIPIPY-TETYMDEYCMR-QSWYF-T-YHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDD   68 (132)
Q Consensus         3 ~vc~~~~~~~~v~~-~esy~qp~~~~-~~~~~-~-~~C~~~r~~~~~~~~~~~~~~~~~~c~C~~Gy~~~   68 (132)
                      +||+.++ +..|+. +|+|.|||..+ +.|++ . ++|+.||+.|+..+|...+...+.+-.|||||.|.
T Consensus         3 nvC~~~~-~~~v~~~~~~~~q~~~~~~~~~C~~~~~~C~~yrt~yr~~Yr~~~k~~t~~~~~CCpGy~~~   71 (72)
T PF07546_consen    3 NVCAYVV-TRTVSCKVESYVQPYVQPYYTPCWWGPPRCSRYRTVYRPAYRQVYKTVTRLEWRCCPGYSGT   71 (72)
T ss_pred             ccCCcEe-EECccEEEEeCcEEEEecccccCCCCCCcCCceEEEeEEEEEEEEEEEccEeeeeCcCcccC
Confidence            6899875 333332 77777777665 44552 2 68999999999999998888888889999999986

The EMI domain is most often found at the N terminus of metazoan extracellular proteins that are forming or are compatible with multimer formation []. It is found in association with other domains, such as C1q, laminin-type EGF-like, collagen-like, FN3, WAP, ZP or FAS1 []. It has been suggested that the EMI domain could be a protein-protein interaction module, as the EMI domain of EMILIN-1 was found to interact with the C1q domain of EMILIN-2 []. The EMI domain possesses six highly conserved cysteines residues, which likely form disulphide bonds. Other key features of the EMI domain are the C-C-x-G-[WYFH] pattern, a hydrophobic position just preceding the first cysteine (Cys1) of the domain and a cluster of hydrophobic residues between Cys3 and Cys4. The EMI domain could be made of two sub-domains, the fold of the second one sharing similarities with the C-terminal sub-module characteristic of EGF-like domains []. Proteins known to contain a EMI domain include: Vertebrate Emilins, extracellular matrix glycoproteins. Vertebrate Multimerins, extracellular matrix glycoproteins. Vetebrate Emu proteins, which could interact with several different extracellular matrix components and serve to connect and integrate the function of multiple partner molecules. Vertebrate beta-IG-H3. Vertebrate osteoblast-specific factor 2 (OSF-2). Mammalian NEU1/NG3 proteins. Drosophila midline fasciclin. Caenorhabditis elegans ced-1, a transmembrane receptor that mediates cell corpse engulfment. The Pfam alignment for this domain is truncated at the C terminus and does not include the final cysteine []. This is to stop the family overlapping with other domains.; GO: 0005515 protein binding

>KOG1225|consensus

Probab=98.80  E-value=6.6e-09  Score=89.58  Aligned_cols=71  Identities=30%  Similarity=0.702  Sum_probs=58.5

Q ss_pred             CCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCCCCEEcCCCceeCCCCC
Q psy8484          56 THVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL  132 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~nG~C~~p~~C~C~~G~  132 (132)
                      .++|+|.+||+|.+.. +++|...|.. |.++. ++|.|++||+|.+ |+..+|..+|+  .+|.|+ +++|.|.+||
T Consensus       264 ~G~CIC~~Gf~G~dC~-e~~Cp~~cs~~g~~~~-g~CiC~~g~~G~d-Cs~~~cpadC~--g~G~Ci-~G~C~C~~Gy  335 (525)
T KOG1225|consen  264 EGRCICPPGFTGDDCD-ELVCPVDCSGGGVCVD-GECICNPGYSGKD-CSIRRCPADCS--GHGKCI-DGECLCDEGY  335 (525)
T ss_pred             CCeEeCCCCCcCCCCC-cccCCcccCCCceecC-CEeecCCCccccc-cccccCCccCC--CCCccc-CCceEeCCCC
Confidence            6789999999987544 7788888874 66665 7999999999997 77777776665  689999 7999999997

>KOG1225|consensus

Probab=98.47  E-value=2.4e-07  Score=80.01  Aligned_cols=65  Identities=28%  Similarity=0.673  Sum_probs=52.5

Q ss_pred             CCceEeCCCceeCCCceecccCCCCC-CcEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcCCCceeCCCCC
Q psy8484          56 THVRICCEGYEDDHGSCRPVCERECV-FGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCDCLDVL  132 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~~C~~~C~-nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~C~~G~  132 (132)
                      ..+|+|.+||+|...+ +..|...|. ||.|+ +++|.|++||+|.. |...       .|.| |.|++ + |.|.+||
T Consensus       295 ~g~CiC~~g~~G~dCs-~~~cpadC~g~G~Ci-~G~C~C~~Gy~G~~-C~~~-------~C~~~g~cv~-g-C~C~~Gw  361 (525)
T KOG1225|consen  295 DGECICNPGYSGKDCS-IRRCPADCSGHGKCI-DGECLCDEGYTGEL-CIQR-------ACSGGGQCVN-G-CKCKKGW  361 (525)
T ss_pred             CCEeecCCCccccccc-cccCCccCCCCCccc-CCceEeCCCCcCCc-cccc-------ccCCCceecc-C-ceeccCc
Confidence            5689999999998654 677888998 59999 79999999999997 5533       2555 56654 6 9999997

>KOG4289|consensus

Probab=97.77  E-value=2.1e-05  Score=74.27  Aligned_cols=73  Identities=27%  Similarity=0.590  Sum_probs=52.6

Q ss_pred             CCceEeCCCceeCCCce-eccc-CCCCC-CcEEcC---CCeEEccCCceeccCCCCC----ccccCCCCCCC-CEEcCC-
Q psy8484          56 THVRICCEGYEDDHGSC-RPVC-ERECV-FGSCTS---PNQCTCSPGYVVINEASPN----ICEPHCAECVN-GVCSAP-  123 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C-~~~C-~~~C~-nG~C~~---p~~C~C~~G~~G~~~c~~~----~C~~~C~~C~n-G~C~~p-  123 (132)
                      ..+|.|+|||+|+.+.= +..| ..+|. ||+|.+   ..+|.|.+||+|.+ |+..    .|.|-  -|.| |+|++. 
T Consensus      1221 glrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGeh-CEvs~~agrCvpG--vC~nggtC~~~~ 1297 (2531)
T KOG4289|consen 1221 GLRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEH-CEVSARAGRCVPG--VCKNGGTCVNLL 1297 (2531)
T ss_pred             ceeEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCccccc-eeeecccCccccc--eecCCCEEeecC
Confidence            46799999999984321 3456 46898 599974   56899999999997 5433    34443  6777 588863 


Q ss_pred             ---CceeCCCC
Q psy8484         124 ---NTCDCLDV  131 (132)
Q Consensus       124 ---~~C~C~~G  131 (132)
                         ..|.|+.|
T Consensus      1298 nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1298 NGGFCCHCPYG 1308 (2531)
T ss_pred             CCceeccCCCc
Confidence               37888876

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.21  E-value=0.0004  Score=38.51  Aligned_cols=23  Identities=39%  Similarity=1.066  Sum_probs=19.6

Q ss_pred             CCC-CcEEcCC-CeEEccCCceecc
Q psy8484          79 ECV-FGSCTSP-NQCTCSPGYVVIN  101 (132)
Q Consensus        79 ~C~-nG~C~~p-~~C~C~~G~~G~~  101 (132)
                      .|. ||+|+.+ ++|.|++||.|++
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~   31 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPD   31 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCC
Confidence            477 6999987 8999999999975

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1226|consensus

Probab=97.19  E-value=0.00073  Score=60.63  Aligned_cols=73  Identities=27%  Similarity=0.551  Sum_probs=45.2

Q ss_pred             CceEeCCCceeCCCcee----------cccC-----CCCC-CcEEcCCCeEEccCCce----ecc-CCCCCccccCCC--
Q psy8484          57 HVRICCEGYEDDHGSCR----------PVCE-----RECV-FGSCTSPNQCTCSPGYV----VIN-EASPNICEPHCA--  113 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~~C~----------~~C~-----~~C~-nG~C~~p~~C~C~~G~~----G~~-~c~~~~C~~~C~--  113 (132)
                      ++|.|.+||.|..++|.          ..|.     +.|. +|.|+= ++|.|.+...    |+. +||...|..+ .  
T Consensus       478 G~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~C-GqC~C~~~~~~~i~G~fCECDnfsC~r~-~g~  555 (783)
T KOG1226|consen  478 GQCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVC-GQCVCHKPDNGKIYGKFCECDNFSCERH-KGV  555 (783)
T ss_pred             cceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeC-CceEecCCCCCceeeeeeeccCcccccc-cCc
Confidence            46899999999865552          1121     2455 366654 6777776655    544 5666666544 1  


Q ss_pred             CC-CCCEEcCCCceeCCCCC
Q psy8484         114 EC-VNGVCSAPNTCDCLDVL  132 (132)
Q Consensus       114 ~C-~nG~C~~p~~C~C~~G~  132 (132)
                      -| .||.|.- |+|+|.+||
T Consensus       556 lC~g~G~C~C-G~CvC~~Gw  574 (783)
T KOG1226|consen  556 LCGGHGRCEC-GRCVCNPGW  574 (783)
T ss_pred             ccCCCCeEeC-CcEEcCCCC
Confidence            24 3677643 788888887

>KOG1219|consensus

Probab=97.04  E-value=0.00069  Score=66.84  Aligned_cols=74  Identities=24%  Similarity=0.621  Sum_probs=53.5

Q ss_pred             CCceEeCCCceeCCCce-eccc-CCCCCC-cEEcC---CCeEEccCCceeccCCCCC---ccccCCCCCCC-CEEcC-CC
Q psy8484          56 THVRICCEGYEDDHGSC-RPVC-ERECVF-GSCTS---PNQCTCSPGYVVINEASPN---ICEPHCAECVN-GVCSA-PN  124 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C-~~~C-~~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~~---~C~~~C~~C~n-G~C~~-p~  124 (132)
                      .+.|.|.+-|.|.+++= ...| ..||.+ |+|+.   ...|.|+.||+|.. |+..   .|..+  .|.| |.|++ ++
T Consensus      3885 gy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~-Ce~~Gi~eCs~n--~C~~gg~C~n~~g 3961 (4289)
T KOG1219|consen 3885 GYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKR-CEARGISECSKN--VCGTGGQCINIPG 3961 (4289)
T ss_pred             ceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCce-eecccccccccc--cccCCceeeccCC
Confidence            45789999999875431 2335 468996 89984   34799999999987 4432   24333  8998 69998 55


Q ss_pred             --ceeCCCCC
Q psy8484         125 --TCDCLDVL  132 (132)
Q Consensus       125 --~C~C~~G~  132 (132)
                        .|.|.+|+
T Consensus      3962 sf~CncT~g~ 3971 (4289)
T KOG1219|consen 3962 SFHCNCTPGI 3971 (4289)
T ss_pred             ceEeccChhH
Confidence              99998875

>KOG1214|consensus

Probab=96.68  E-value=0.0029  Score=57.80  Aligned_cols=75  Identities=28%  Similarity=0.661  Sum_probs=52.5

Q ss_pred             CCceEeCCCcee--CCCceecccC----CC-------CC-Cc--EEc----CCCeEEccCCceecc--CCCCCccccCCC
Q psy8484          56 THVRICCEGYED--DHGSCRPVCE----RE-------CV-FG--SCT----SPNQCTCSPGYVVIN--EASPNICEPHCA  113 (132)
Q Consensus        56 ~~~c~C~~Gy~~--~~~~C~~~C~----~~-------C~-nG--~C~----~p~~C~C~~G~~G~~--~c~~~~C~~~C~  113 (132)
                      ..+|.|..||.=  ...+|+++-.    +.       |. +|  +|+    +...|.|-+||.|..  .++.++|+|+  
T Consensus       756 ~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c~dvDeC~ps--  833 (1289)
T KOG1214|consen  756 SYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQCTDVDECSPS--  833 (1289)
T ss_pred             ceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCccccccccccCcc--
Confidence            346778888754  3468865532    23       43 34  444    345799999999976  5677788877  


Q ss_pred             CCC-CCEEcC-C--CceeCCCCC
Q psy8484         114 ECV-NGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus       114 ~C~-nG~C~~-p--~~C~C~~G~  132 (132)
                      .|. +..|.+ |  ..|.|.+||
T Consensus       834 rChp~A~CyntpgsfsC~C~pGy  856 (1289)
T KOG1214|consen  834 RCHPAATCYNTPGSFSCRCQPGY  856 (1289)
T ss_pred             ccCCCceEecCCCcceeecccCc
Confidence            887 789997 4  589999997

>KOG1219|consensus

Probab=95.90  E-value=0.0096  Score=59.37  Aligned_cols=52  Identities=25%  Similarity=0.696  Sum_probs=40.9

Q ss_pred             CCCCC-cEEcC----CCeEEccCCceeccCCCCC--ccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484          78 RECVF-GSCTS----PNQCTCSPGYVVINEASPN--ICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~----p~~C~C~~G~~G~~~c~~~--~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      .+|+| |.|+.    ...|.|++.|+|.. |+..  .|.+.  +|.+ |+|+..   ..|.|+.||
T Consensus      3870 npCqhgG~C~~~~~ggy~CkCpsqysG~~-CEi~~epC~sn--PC~~GgtCip~~n~f~CnC~~gy 3932 (4289)
T KOG1219|consen 3870 NPCQHGGTCISQPKGGYKCKCPSQYSGNH-CEIDLEPCASN--PCLTGGTCIPFYNGFLCNCPNGY 3932 (4289)
T ss_pred             CcccCCCEecCCCCCceEEeCcccccCcc-cccccccccCC--CCCCCCEEEecCCCeeEeCCCCc
Confidence            58998 89984    45899999999998 5443  35544  9997 699973   589999887

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.88  E-value=0.0059  Score=33.46  Aligned_cols=23  Identities=35%  Similarity=0.904  Sum_probs=18.4

Q ss_pred             CCCCC-cEEcCC----CeEEccCCceec
Q psy8484          78 RECVF-GSCTSP----NQCTCSPGYVVI  100 (132)
Q Consensus        78 ~~C~n-G~C~~p----~~C~C~~G~~G~  100 (132)
                      .+|.| |+|+..    ..|.|.+||+|.
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            47886 899743    479999999996

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00051 DSL delta serrate ligand

Probab=95.60  E-value=0.011  Score=37.59  Aligned_cols=42  Identities=19%  Similarity=0.460  Sum_probs=30.8

Q ss_pred             ceEeCCCceeCCCceecccCC--CCC-CcEEcCCCeEEccCCceecc
Q psy8484          58 VRICCEGYEDDHGSCRPVCER--ECV-FGSCTSPNQCTCSPGYVVIN  101 (132)
Q Consensus        58 ~c~C~~Gy~~~~~~C~~~C~~--~C~-nG~C~~p~~C~C~~G~~G~~  101 (132)
                      +-.|.++|.|..  |.-.|..  .+. |.+|...+.+.|.+||.|.+
T Consensus        18 rv~C~~~~yG~~--C~~~C~~~~d~~~~~~Cd~~G~~~C~~Gw~G~~   62 (63)
T smart00051       18 RVTCDENYYGEG--CNKFCRPRDDFFGHYTCDENGNKGCLEGWMGPY   62 (63)
T ss_pred             EeeCCCCCcCCc--cCCEeCcCccccCCccCCcCCCEecCCCCcCCC
Confidence            456899999874  4444432  233 57898888999999999975

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.50  E-value=0.0079  Score=26.85  Aligned_cols=12  Identities=42%  Similarity=1.099  Sum_probs=6.9

Q ss_pred             eEEccCCceecc
Q psy8484          90 QCTCSPGYVVIN  101 (132)
Q Consensus        90 ~C~C~~G~~G~~  101 (132)
                      +|.|++||+|.+
T Consensus         1 ~C~C~~G~~G~~   12 (13)
T PF12661_consen    1 TCQCPPGWTGPN   12 (13)
T ss_dssp             EEEE-TTEETTT
T ss_pred             CccCcCCCcCCC
Confidence            366677776654

>KOG1226|consensus

Probab=95.33  E-value=0.037  Score=50.00  Aligned_cols=22  Identities=32%  Similarity=0.937  Sum_probs=18.6

Q ss_pred             CCC-CcEEcCCCeEEccCCceecc
Q psy8484          79 ECV-FGSCTSPNQCTCSPGYVVIN  101 (132)
Q Consensus        79 ~C~-nG~C~~p~~C~C~~G~~G~~  101 (132)
                      .|. ||.|.- ++|.|.+||+|..
T Consensus       556 lC~g~G~C~C-G~CvC~~GwtG~~  578 (783)
T KOG1226|consen  556 LCGGHGRCEC-GRCVCNPGWTGSA  578 (783)
T ss_pred             ccCCCCeEeC-CcEEcCCCCccCC
Confidence            476 688865 8999999999987

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.28  E-value=0.026  Score=31.13  Aligned_cols=17  Identities=29%  Similarity=0.729  Sum_probs=15.5

Q ss_pred             CCCEEcCC-CceeCCCCC
Q psy8484         116 VNGVCSAP-NTCDCLDVL  132 (132)
Q Consensus       116 ~nG~C~~p-~~C~C~~G~  132 (132)
                      .||+|+.+ ++|.|.+||
T Consensus        10 ~~G~C~~~~g~C~C~~g~   27 (32)
T PF07974_consen   10 GHGTCVSPCGRCVCDSGY   27 (32)
T ss_pred             CCCEEeCCCCEEECCCCC
Confidence            47999987 999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG4289|consensus

Probab=94.79  E-value=0.019  Score=55.24  Aligned_cols=41  Identities=32%  Similarity=0.810  Sum_probs=32.0

Q ss_pred             eEEccCCceecc-CCCCCccccCCCCCC-CCEEcC---CCceeCCCCC
Q psy8484          90 QCTCSPGYVVIN-EASPNICEPHCAECV-NGVCSA---PNTCDCLDVL  132 (132)
Q Consensus        90 ~C~C~~G~~G~~-~c~~~~C~~~C~~C~-nG~C~~---p~~C~C~~G~  132 (132)
                      +|+|++||+|.. +-+.+.|-..  +|. ||.|..   .++|+|.+||
T Consensus      1223 rCrCPpGFTgd~CeTeiDlCYs~--pC~nng~C~srEggYtCeCrpg~ 1268 (2531)
T KOG4289|consen 1223 RCRCPPGFTGDYCETEIDLCYSG--PCGNNGRCRSREGGYTCECRPGF 1268 (2531)
T ss_pred             eEeCCCCCCcccccchhHhhhcC--CCCCCCceEEecCceeEEecCCc
Confidence            699999999987 2234556554  887 589987   3799999998

>smart00051 DSL delta serrate ligand

Probab=93.26  E-value=0.075  Score=33.66  Aligned_cols=38  Identities=21%  Similarity=0.538  Sum_probs=26.8

Q ss_pred             EccCCceeccCCCCCccccCCCCCC-CCEEcCCCceeCCCCC
Q psy8484          92 TCSPGYVVINEASPNICEPHCAECV-NGVCSAPNTCDCLDVL  132 (132)
Q Consensus        92 ~C~~G~~G~~~c~~~~C~~~C~~C~-nG~C~~p~~C~C~~G~  132 (132)
                      .|+++|.|.. |+ ..|.+. ..+. +..|...|.++|.+||
T Consensus        20 ~C~~~~yG~~-C~-~~C~~~-~d~~~~~~Cd~~G~~~C~~Gw   58 (63)
T smart00051       20 TCDENYYGEG-CN-KFCRPR-DDFFGHYTCDENGNKGCLEGW   58 (63)
T ss_pred             eCCCCCcCCc-cC-CEeCcC-ccccCCccCCcCCCEecCCCC
Confidence            6789999987 53 344432 0233 4699888999999998

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=90.68  E-value=0.13  Score=32.65  Aligned_cols=44  Identities=25%  Similarity=0.546  Sum_probs=21.4

Q ss_pred             CCceEeCCCceeCCCceecccCCC--CC-CcEEcCCCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDDHGSCRPVCERE--CV-FGSCTSPNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~~C~~~--C~-nG~C~~p~~C~C~~G~~G~~  101 (132)
                      +.+-.|.+.|.|..  |.-.|.+.  -. |-+|.+.+.=.|.+||.|++
T Consensus        16 ~~rv~C~~nyyG~~--C~~~C~~~~d~~ghy~Cd~~G~~~C~~Gw~G~~   62 (63)
T PF01414_consen   16 RIRVVCDENYYGPN--CSKFCKPRDDSFGHYTCDSNGNKVCLPGWTGPN   62 (63)
T ss_dssp             -------TTEETTT--T-EE---EEETTEEEEE-SS--EEE-TTEESTT
T ss_pred             EEEEECCCCCCCcc--ccCCcCCCcCCcCCcccCCCCCCCCCCCCcCCC
Confidence            45678999999984  44444322  11 45888888899999999985

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>KOG1214|consensus

Probab=88.13  E-value=0.52  Score=43.71  Aligned_cols=46  Identities=28%  Similarity=0.683  Sum_probs=33.6

Q ss_pred             CCceEeCCCceeCCCcee--cccCC-CCC-CcEEcC---CCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDDHGSCR--PVCER-ECV-FGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~--~~C~~-~C~-nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+.|.|.|||.|.+..|.  ..|.+ .|. +..|+.   ...|+|.+||.|..
T Consensus       808 ~y~C~CLPGfsGDG~~c~dvDeC~psrChp~A~CyntpgsfsC~C~pGy~GDG  860 (1289)
T KOG1214|consen  808 TYSCACLPGFSGDGHQCTDVDECSPSRCHPAATCYNTPGSFSCRCQPGYYGDG  860 (1289)
T ss_pred             eEEEeecCCccCCccccccccccCccccCCCceEecCCCcceeecccCccCCC
Confidence            567999999999976653  23432 454 688874   35799999999975

>KOG1217|consensus

Probab=87.37  E-value=1.5  Score=35.73  Aligned_cols=75  Identities=32%  Similarity=0.713  Sum_probs=46.2

Q ss_pred             CceEeCCCceeCC-Cce--ecccCC--CCCC-cEEcCC---CeEEccCCceeccC--C-CCCccccCCC--CCCCC-EEc
Q psy8484          57 HVRICCEGYEDDH-GSC--RPVCER--ECVF-GSCTSP---NQCTCSPGYVVINE--A-SPNICEPHCA--ECVNG-VCS  121 (132)
Q Consensus        57 ~~c~C~~Gy~~~~-~~C--~~~C~~--~C~n-G~C~~p---~~C~C~~G~~G~~~--c-~~~~C~~~C~--~C~nG-~C~  121 (132)
                      +.|.|.+||.+.. ..|  ...|..  .|.| |.|+..   ..|.|++||.|...  + +...|.+.-.  .|.+| .|.
T Consensus       252 ~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~  331 (487)
T KOG1217|consen  252 YTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCN  331 (487)
T ss_pred             eeeeCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccc
Confidence            4688899998875 222  233433  3775 899864   67999999999872  1 2234532112  57764 773


Q ss_pred             CC-----CceeCCCC
Q psy8484         122 AP-----NTCDCLDV  131 (132)
Q Consensus       122 ~p-----~~C~C~~G  131 (132)
                      ..     ..|.|..|
T Consensus       332 ~~~~~~~~~C~c~~~  346 (487)
T KOG1217|consen  332 TLGSFGGFRCACGPG  346 (487)
T ss_pred             cCCCCCCCCcCCCCC
Confidence            32     34777665

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=86.39  E-value=0.31  Score=37.47  Aligned_cols=76  Identities=28%  Similarity=0.722  Sum_probs=45.6

Q ss_pred             cCCCceEeCCCceeC-CCceec--ccC------CCCCC-cEEcCC--------CeEEccCCceecc-CCCCCccccCCCC
Q psy8484          54 EDTHVRICCEGYEDD-HGSCRP--VCE------RECVF-GSCTSP--------NQCTCSPGYVVIN-EASPNICEPHCAE  114 (132)
Q Consensus        54 ~~~~~c~C~~Gy~~~-~~~C~~--~C~------~~C~n-G~C~~p--------~~C~C~~G~~G~~-~c~~~~C~~~C~~  114 (132)
                      ..-+.|.|.+||.-. ..+|++  .|.      ++|.+ +.|+..        ..|.|.+||.-.. .|-+..|...  .
T Consensus        17 SNHfEC~Cnegfvl~~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~vCvp~~C~~~--~   94 (197)
T PF06247_consen   17 SNHFECKCNEGFVLKNENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGVCVPNKCNNK--D   94 (197)
T ss_dssp             SSEEEEEESTTEEEEETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSSEEEGGGSS----
T ss_pred             cCceEEEcCCCcEEccccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCeEchhhcCce--e
Confidence            334679999999876 567743  343      36775 889732        2699999998875 2333334333  7


Q ss_pred             CCCCEEcC-C-----CceeCCCC
Q psy8484         115 CVNGVCSA-P-----NTCDCLDV  131 (132)
Q Consensus       115 C~nG~C~~-p-----~~C~C~~G  131 (132)
                      |.+|.|+- |     -.|+|.-|
T Consensus        95 Cg~GKCI~d~~~~~~~~CSC~IG  117 (197)
T PF06247_consen   95 CGSGKCILDPDNPNNPTCSCNIG  117 (197)
T ss_dssp             -TTEEEEEEEGGGSEEEEEE-TE
T ss_pred             cCCCeEEecCCCCCCceeEeeec
Confidence            88899984 2     27888654

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=86.20  E-value=0.87  Score=35.06  Aligned_cols=74  Identities=28%  Similarity=0.710  Sum_probs=43.2

Q ss_pred             CCceEeCCCceeCCCcee-cccCC-CCCCcEEcC----C--CeEEccCCceeccCCCCCccc----cCCC-CCC-CCEEc
Q psy8484          56 THVRICCEGYEDDHGSCR-PVCER-ECVFGSCTS----P--NQCTCSPGYVVINEASPNICE----PHCA-ECV-NGVCS  121 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~-~~C~~-~C~nG~C~~----p--~~C~C~~G~~G~~~c~~~~C~----~~C~-~C~-nG~C~  121 (132)
                      .+.|.|-+||......|+ ..|.. .|.+|.|+.    +  ..|+|+-|.. ++  +...|.    ..|+ .|. |-.|-
T Consensus        69 ~~~C~C~~gY~~~~~vCvp~~C~~~~Cg~GKCI~d~~~~~~~~CSC~IGkV-~~--dn~kCtk~G~T~C~LKCk~nE~CK  145 (197)
T PF06247_consen   69 AYKCDCINGYILKQGVCVPNKCNNKDCGSGKCILDPDNPNNPTCSCNIGKV-PD--DNKKCTKTGETKCSLKCKENEECK  145 (197)
T ss_dssp             SEEEEE-TTEEESSSSEEEGGGSS---TTEEEEEEEGGGSEEEEEE-TEEE-TT--TTTESEEEE--------TTTEEEE
T ss_pred             eEEEecccCceeeCCeEchhhcCceecCCCeEEecCCCCCCceeEeeeceE-ec--cCCcccCCCccceeeecCCCccee
Confidence            467999999999988996 56753 688999972    1  2799999998 32  122331    2233 343 56776


Q ss_pred             C---CCceeCCCCC
Q psy8484         122 A---PNTCDCLDVL  132 (132)
Q Consensus       122 ~---p~~C~C~~G~  132 (132)
                      .   -++|.|.+||
T Consensus       146 ~~~~~Y~C~~~~~~  159 (197)
T PF06247_consen  146 LVDGYYKCVCKEGF  159 (197)
T ss_dssp             EETTEEEEEE-TT-
T ss_pred             eeCcEEEeecCCCC
Confidence            4   2688888775

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=83.30  E-value=1.5  Score=23.55  Aligned_cols=19  Identities=32%  Similarity=0.842  Sum_probs=10.1

Q ss_pred             CCCC-CEEcCC---CceeCCCCC
Q psy8484         114 ECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       114 ~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      +|.+ |.|++.   ..|.|++||
T Consensus        10 ~C~~~~~C~~~~g~~~C~C~~g~   32 (39)
T smart00179       10 PCQNGGTCVNTVGSYRCECPPGY   32 (39)
T ss_pred             CcCCCCEeECCCCCeEeECCCCC
Confidence            3443 466542   356666665

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=82.23  E-value=1.6  Score=22.63  Aligned_cols=23  Identities=35%  Similarity=0.963  Sum_probs=17.4

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceec
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVI  100 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~  100 (132)
                      .+|.+ +.|+.   ...|.|+.||.|.
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCccc
Confidence            46664 78874   4679999999886

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=80.05  E-value=2  Score=22.57  Aligned_cols=23  Identities=39%  Similarity=1.048  Sum_probs=16.9

Q ss_pred             CCCC-cEEcC---CCeEEccCCceecc
Q psy8484          79 ECVF-GSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        79 ~C~n-G~C~~---p~~C~C~~G~~G~~  101 (132)
                      +|.+ |.|+.   ...|.|.+||.|..
T Consensus        10 ~C~~~~~C~~~~~~~~C~C~~g~~g~~   36 (38)
T cd00054          10 PCQNGGTCVNTVGSYRCSCPPGYTGRN   36 (38)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCcCCc
Confidence            5764 68863   34699999999864

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>KOG1217|consensus

Probab=80.01  E-value=3.9  Score=33.27  Aligned_cols=76  Identities=26%  Similarity=0.596  Sum_probs=47.4

Q ss_pred             CCceEeCCCceeCCC----ceecccCCCCCCcEEcC------CCeEEccCCceeccCCCC--CccccCCCCCCC-CEEcC
Q psy8484          56 THVRICCEGYEDDHG----SCRPVCERECVFGSCTS------PNQCTCSPGYVVINEASP--NICEPHCAECVN-GVCSA  122 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~----~C~~~C~~~C~nG~C~~------p~~C~C~~G~~G~~~c~~--~~C~~~C~~C~n-G~C~~  122 (132)
                      ...|.|.+||.+...    .|...-..-+.++.|..      ...|.|..||.|.. +..  +.|...=..|.| +.|.+
T Consensus       109 ~~~c~c~~g~~~~~~~~~~~C~~~~~~~~~~~~c~~~~~~~~~~~c~C~~g~~~~~-~~~~~~~C~~~~~~c~~~~~C~~  187 (487)
T KOG1217|consen  109 SYECTCPPGYQGTPCEGECECVTGPGVCCIDGSCSNGPGSVGPFRCSCTEGYEGEP-CETDLDECIQYSSPCQNGGTCVN  187 (487)
T ss_pred             CceeeCCCccccCcCCcceeecCCCCCeeCchhhcCCCCCCCceeeeeCCCccccc-ccccccccccCCCCcCCCccccc
Confidence            556889999988732    23221110123577763      46799999999986 332  355522115776 68887


Q ss_pred             C---CceeCCCCC
Q psy8484         123 P---NTCDCLDVL  132 (132)
Q Consensus       123 p---~~C~C~~G~  132 (132)
                      .   ..|.|.+||
T Consensus       188 ~~~~~~C~c~~~~  200 (487)
T KOG1217|consen  188 TGGSYLCSCPPGY  200 (487)
T ss_pred             CCCCeeEeCCCCc
Confidence            4   469998886

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	132
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	2e-06

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 62  CEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCS 121
           C        +    C R C  G CT   +C CSPG+          CEP C     GVC 
Sbjct: 381 CRATVQPAQTLTSECSRLCRNGYCTPTGKCCCSPGWEGDF-CRTAKCEPACRH--GGVCV 437

Query: 122 APNTCDC 128
            PN C C
Sbjct: 438 RPNKCLC 444

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	132
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.12
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.0
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.96
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.94
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.9
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.59
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	98.48
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.46
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.46
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.37
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.35
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.34
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.32
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.29
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.25
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	98.17
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.14
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.12
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.09
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.09
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.99
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.78
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.75
2bou_A	143	EGF-like module containing mucin-like hormone rece	97.71
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	97.61
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.54
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.25
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.18
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.14
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.08
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.02
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.0
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	97.0
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	96.97
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	96.95
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.84
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	96.8
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	96.78
2vh0_B	134	Activated factor XA light chain; serine protease,	96.71
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	96.67
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	96.66
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.44
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.39
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	96.11
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.03
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	95.91
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	95.88
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	95.87
1aut_L	114	Activated protein C; serine proteinase, plasma cal	95.83
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	95.36
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	95.1
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.08
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	95.07
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	94.93
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	94.92
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	94.81
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	94.04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	93.89
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	93.84
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	93.8
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	93.63
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	93.53
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	93.52
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	93.09
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	92.99
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	92.83
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	92.69
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	92.37
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	92.33
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	92.32
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	92.13
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	92.11
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	91.59
1ob1_C	99	Major merozoite surface protein; immune system, im	91.35
2vh0_B	134	Activated factor XA light chain; serine protease,	91.25
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	90.66
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	90.56
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	90.54
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	90.11
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	90.05
3v65_B	386	Low-density lipoprotein receptor-related protein;	89.55
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	89.43
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	89.0
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	88.94
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	88.69
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	88.49
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	88.4
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	87.65
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	87.42
1ob1_C	99	Major merozoite surface protein; immune system, im	87.05
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	86.57
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	85.96
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	85.75
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	85.32
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	84.56
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	81.9
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	81.61
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	81.49
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	81.28
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	80.25
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	80.04

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.12  E-value=1e-10  Score=93.98  Aligned_cols=76  Identities=28%  Similarity=0.813  Sum_probs=60.0

Q ss_pred             eecCCCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCC-CCEEcCCCceeCC
Q psy8484          52 YMEDTHVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECV-NGVCSAPNTCDCL  129 (132)
Q Consensus        52 ~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~-nG~C~~p~~C~C~  129 (132)
                      .+...+.|.|.+||+|...+ .+.|..+|.| |.|+.++.|.|++||.|.. |+...|..   .|. +|+|+.+++|.|+
T Consensus       160 ~C~~~~~C~C~~G~~G~~C~-~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~-C~~~~C~~---~C~~~G~C~~~~~C~C~  234 (324)
T 2ygq_A          160 FCNERRICECPDGFHGPHCE-KALCTPRCMNGGLCVTPGFCICPPGFYGVN-CDKANCST---TCFNGGTCFYPGKCICP  234 (324)
T ss_dssp             EECTTSCEECCTTEESSSSC-EESSSSCCCTTCEECSSCCEECCTTCBTTT-TCBCCCSS---CCCSSCCBSCSSCBCCC
T ss_pred             EECCCCeEECCCCCcCCCCC-CCCCCCCCCCCCEEcCCCEEeCCCCccCCC-cccCcCCC---CCCCCCeeCCCCeeeCC
Confidence            34446789999999997543 5678888985 9999999999999999987 76555543   555 4788888889998


Q ss_pred             CCC
Q psy8484         130 DVL  132 (132)
Q Consensus       130 ~G~  132 (132)
                      +||
T Consensus       235 ~G~  237 (324)
T 2ygq_A          235 PGL  237 (324)
T ss_dssp             TTC
T ss_pred             CCc
Confidence            887

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.00  E-value=4.3e-10  Score=82.34  Aligned_cols=76  Identities=30%  Similarity=0.799  Sum_probs=42.1

Q ss_pred             eecCCCceEeCCCceeCCCceecccCCCC--CCcEEcCCCeEEccCCceeccCCCCCccccCCCCCCCCEEcCCCceeCC
Q psy8484          52 YMEDTHVRICCEGYEDDHGSCRPVCEREC--VFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCL  129 (132)
Q Consensus        52 ~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C--~nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~nG~C~~p~~C~C~  129 (132)
                      .+.....|.|.+||+|.... .++|...|  .||.|+.+++|.|++||.|.. |+  .|... ..|.||+|+.+++|.|+
T Consensus        45 ~C~~~g~C~C~~G~~G~~C~-~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~-C~--~C~~~-~~C~~g~C~~~~~C~C~  119 (169)
T 2vj2_A           45 ACDQNGNKTCMEGWMGPECN-RAICRQGCSPKHGSCKLPGDCRCQYGWQGLY-CD--KCIPH-PGCVHGICNEPWQCLCE  119 (169)
T ss_dssp             EECSSCCEEECTTEESTTSC-EECCCTTCCTTTEECSSTTCCEECTTEESSS-SC--EECCC-TTCSSEECSSTTCCEEC
T ss_pred             EeCCCCeeECCCCCcCCCCC-CCCCCCCCCCCCcccCCCCeeECCCCCCCCC-cc--cCCCC-CCCCCCCcCCCCEEeCC
Confidence            44445667777777776332 45565556  356676666777777777665 32  12211 02455555555555555


Q ss_pred             CCC
Q psy8484         130 DVL  132 (132)
Q Consensus       130 ~G~  132 (132)
                      +||
T Consensus       120 ~G~  122 (169)
T 2vj2_A          120 TNW  122 (169)
T ss_dssp             TTE
T ss_pred             CCC
Confidence            554

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.96  E-value=2.9e-10  Score=91.36  Aligned_cols=76  Identities=25%  Similarity=0.622  Sum_probs=39.2

Q ss_pred             eecCCCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcCCCceeCC
Q psy8484          52 YMEDTHVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCDCL  129 (132)
Q Consensus        52 ~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~C~  129 (132)
                      .+...+.|.|.+||+|.... .+.|..+|.| |+|+.+++|.|++||.|.. |+...|..   +|.| |.|++.++|.|+
T Consensus       192 ~C~~~~~C~C~~G~~G~~C~-~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~-C~~~~C~~---~C~~~g~C~~~~~C~C~  266 (324)
T 2ygq_A          192 LCVTPGFCICPPGFYGVNCD-KANCSTTCFNGGTCFYPGKCICPPGLEGEQ-CEISKCPQ---PCRNGGKCIGKSKCKCS  266 (324)
T ss_dssp             EECSSCCEECCTTCBTTTTC-BCCCSSCCCSSCCBSCSSCBCCCTTCCTTT-TC--------------------------
T ss_pred             EEcCCCEEeCCCCccCCCcc-cCcCCCCCCCCCeeCCCCeeeCCCCccCCC-CCcCcCCC---cCCCCCEECCCCEEECC
Confidence            33445789999999987543 5667778885 8898888899999998886 66544432   4553 677766777777


Q ss_pred             CCC
Q psy8484         130 DVL  132 (132)
Q Consensus       130 ~G~  132 (132)
                      +||
T Consensus       267 ~G~  269 (324)
T 2ygq_A          267 KGY  269 (324)
T ss_dssp             ---
T ss_pred             CCC
Confidence            766

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.94  E-value=3.3e-10  Score=82.95  Aligned_cols=73  Identities=22%  Similarity=0.522  Sum_probs=53.8

Q ss_pred             CCceEeCCCceeCCCceecccCC--CCC-CcEEcCCCeEEccCCceeccCCCCCccccCCCCCCCCEEcCCCceeCCCCC
Q psy8484          56 THVRICCEGYEDDHGSCRPVCER--ECV-FGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL  132 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~~C~~--~C~-nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~nG~C~~p~~C~C~~G~  132 (132)
                      ...+.|.+||.|..  |+..|..  .|. ||+|..+++|.|.+||.|.. |+...|...| .+.||.|+++++|.|++||
T Consensus        16 ~~~c~C~~g~~G~~--C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~-C~~~~C~~~C-~~~~g~C~~~~~C~C~~G~   91 (169)
T 2vj2_A           16 RSAVTCDDYYYGFG--CNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPE-CNRAICRQGC-SPKHGSCKLPGDCRCQYGW   91 (169)
T ss_dssp             -----CCTTEETTT--TCEECCCEEETTEEEEECSSCCEEECTTEESTT-SCEECCCTTC-CTTTEECSSTTCCEECTTE
T ss_pred             CeeeeCCCcCcCCC--cccccCCCCCcCCCCEeCCCCeeECCCCCcCCC-CCCCCCCCCC-CCCCcccCCCCeeECCCCC
Confidence            56799999999975  5455653  566 59999999999999999987 7655554433 2368999999999999997

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.90  E-value=1.9e-10  Score=96.30  Aligned_cols=69  Identities=33%  Similarity=0.728  Sum_probs=39.5

Q ss_pred             eEeCCCceeCCCceecccCCCCCCcEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcCCCceeCCCCC
Q psy8484          59 RICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCDCLDVL  132 (132)
Q Consensus        59 c~C~~Gy~~~~~~C~~~C~~~C~nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~C~~G~  132 (132)
                      ..|.+||.+..+. ...|..+|.||.|+.+++|.|.+||+|.. |+...|.+   +|.| |+|++++.|.|.+||
T Consensus       379 ~~C~~~~~g~~c~-~~~C~~~C~nG~C~~~~~C~C~~G~~G~~-C~~~~C~~---~C~~~g~C~~~~~C~C~~G~  448 (463)
T 2wg3_C          379 EECRATVQPAQTL-TSECSRLCRNGYCTPTGKCCCSPGWEGDF-CRTAKCEP---ACRHGGVCVRPNKCLCKKGY  448 (463)
T ss_dssp             GGGCCCCCCCCCC-CCHHHHHCCSEEECTTSCEEECTTEESTT-SCEECC-------------------------
T ss_pred             ccCCCCCcCCCCc-cccccCCCCCCccCCCCeECCCCCcCCCc-CCcCcCCC---CCCCCCEECCCCEEECCCCc
Confidence            6788999887543 56677779999999999999999999997 77555554   6775 799999999999998

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.59  E-value=5.8e-08  Score=68.19  Aligned_cols=74  Identities=28%  Similarity=0.684  Sum_probs=53.7

Q ss_pred             CCceEeCCCceeCCCc-----------e--ecccC-CCCCC-cEEc----------CCCeEEccCCceeccCC--CCCcc
Q psy8484          56 THVRICCEGYEDDHGS-----------C--RPVCE-RECVF-GSCT----------SPNQCTCSPGYVVINEA--SPNIC  108 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~-----------C--~~~C~-~~C~n-G~C~----------~p~~C~C~~G~~G~~~c--~~~~C  108 (132)
                      .+.|.|.+||+|....           |  ...|. .+|.| |.|+          ....|.|++||.|.. |  +.+.|
T Consensus        22 ~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~-C~~~i~~C  100 (143)
T 4d90_A           22 SFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIH-CQHNINEC  100 (143)
T ss_dssp             CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTT-SCEECCTT
T ss_pred             CEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCC-cccCCCcC
Confidence            4679999999987421           0  12343 46886 8998          245899999999987 5  44566


Q ss_pred             ccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         109 EPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       109 ~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      ...  +|.+ |.|++.   +.|.|++||
T Consensus       101 ~~~--~C~~~~~C~~~~g~~~C~C~~G~  126 (143)
T 4d90_A          101 EVE--PCKNGGICTDLVANYSCECPGEF  126 (143)
T ss_dssp             TTC--CSCTTCEEEEETTEEEEECCTTC
T ss_pred             CCC--CCCCCCEeECCCCCeEeECCCCC
Confidence            544  7885 799863   489999998

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=98.48  E-value=2.1e-07  Score=65.34  Aligned_cols=74  Identities=24%  Similarity=0.641  Sum_probs=53.6

Q ss_pred             CCceEeCCCceeCCCce-ecccC-CCCCC-cEEcCC---CeEEccCCceeccCCC--CCccccCCCCCCC-CEEcCC---
Q psy8484          56 THVRICCEGYEDDHGSC-RPVCE-RECVF-GSCTSP---NQCTCSPGYVVINEAS--PNICEPHCAECVN-GVCSAP---  123 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C-~~~C~-~~C~n-G~C~~p---~~C~C~~G~~G~~~c~--~~~C~~~C~~C~n-G~C~~p---  123 (132)
                      .+.|.|.+||+|....- +..|. .+|.+ |+|+..   ..|.|++||.|.. |+  .+.|...  +|.+ |+|++.   
T Consensus        27 ~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-C~~~~~~C~~~--~C~~~g~C~~~~g~  103 (135)
T 2vj3_A           27 SFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVH-CEVNTDECASS--PCLHNGRCLDKINE  103 (135)
T ss_dssp             SEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSS-SCEECCTTTTC--CSTTTCEEEECSSC
T ss_pred             CEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCc-ceecCCcccCC--CcCCCCEeECCCCC
Confidence            35799999999874321 23353 47885 899853   4899999999987 53  3455544  7875 899863   


Q ss_pred             CceeCCCCC
Q psy8484         124 NTCDCLDVL  132 (132)
Q Consensus       124 ~~C~C~~G~  132 (132)
                      +.|.|++||
T Consensus       104 ~~C~C~~G~  112 (135)
T 2vj3_A          104 FQCECPTGF  112 (135)
T ss_dssp             EEEECCTTE
T ss_pred             eEEECCCCC
Confidence            589999997

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.46  E-value=1.9e-07  Score=71.38  Aligned_cols=73  Identities=25%  Similarity=0.603  Sum_probs=54.5

Q ss_pred             CceEeCCCceeCCCceec----------ccC-----CCCC-CcEEcCCCeEEccCC------ceeccCCC--CCccccCC
Q psy8484          57 HVRICCEGYEDDHGSCRP----------VCE-----RECV-FGSCTSPNQCTCSPG------YVVINEAS--PNICEPHC  112 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~~C~~----------~C~-----~~C~-nG~C~~p~~C~C~~G------~~G~~~c~--~~~C~~~C  112 (132)
                      ..|.|.+||+|...+|..          .|.     .+|. +|.|+. ++|.|.+|      |.|.. |+  ...|...-
T Consensus       107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~-Ce~~~~~C~~~~  184 (217)
T 2p28_B          107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQY-CECDTINCERYN  184 (217)
T ss_dssp             TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEESTT-SCEESSCSCEET
T ss_pred             CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEECCC-cccCCccCCCCC
Confidence            679999999999766531          354     4677 599995 89999999      58887 54  45565441


Q ss_pred             C-CCC-C--CEEcCCCceeCCCCC
Q psy8484         113 A-ECV-N--GVCSAPNTCDCLDVL  132 (132)
Q Consensus       113 ~-~C~-n--G~C~~p~~C~C~~G~  132 (132)
                      . .|. |  |+|+. ++|.|.+||
T Consensus       185 g~~C~~~~~G~C~~-g~C~C~~G~  207 (217)
T 2p28_B          185 GQVCGGPGRGLCFC-GKCRCHPGF  207 (217)
T ss_dssp             TEETTCTTTEEEET-TEEEECTTE
T ss_pred             CCCCCCCCCcEEeC-CeeECCCCC
Confidence            1 365 5  99986 899999998

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.46  E-value=1.3e-07  Score=78.43  Aligned_cols=71  Identities=27%  Similarity=0.769  Sum_probs=53.1

Q ss_pred             ceEeCCCceeCCCceecccCCCCCC-cEEcC-CCeEEccCCceeccCCCC----C----ccccCCC---CCCC-CEEcC-
Q psy8484          58 VRICCEGYEDDHGSCRPVCERECVF-GSCTS-PNQCTCSPGYVVINEASP----N----ICEPHCA---ECVN-GVCSA-  122 (132)
Q Consensus        58 ~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~-p~~C~C~~G~~G~~~c~~----~----~C~~~C~---~C~n-G~C~~-  122 (132)
                      .|.|.+||.|.  .|...|. +|.| |+|.. .++|.|++||.|.. |+.    .    .|...|.   .|.+ |.|.. 
T Consensus       186 ~c~C~~g~~G~--~C~~~C~-~C~~~G~C~~~~g~C~C~~G~~G~~-Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~  261 (423)
T 2gy5_A          186 VRRCEAQKWGP--ECNHLCT-ACMNNGVCHEDTGECICPPGFMGRT-CEKACELHTFGRTCKERCSGQEGCKSYVFCLPD  261 (423)
T ss_dssp             ECSSCTTEEST--TSCEECC-CCCTTCEECTTTCCEECCTTEESTT-SCEECCTTEESTTSCEECCSTTTTTTCCEEETT
T ss_pred             CCcCCCCCCCC--CCCCCCC-CCCCCCEEECCCCcEeCCCCccCCC-cccccCCCCCCCCcCccCCCCCCCCCCCEECCC
Confidence            47899999986  4555664 7885 99986 78999999999997 542    1    2333343   5775 78875 


Q ss_pred             CCceeCCCCC
Q psy8484         123 PNTCDCLDVL  132 (132)
Q Consensus       123 p~~C~C~~G~  132 (132)
                      .++|.|.+||
T Consensus       262 ~~~C~C~~G~  271 (423)
T 2gy5_A          262 PYGCSCATGW  271 (423)
T ss_dssp             TTEEECCBTC
T ss_pred             CCeEEeCCCc
Confidence            6899999998

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.37  E-value=5.7e-07  Score=78.85  Aligned_cols=74  Identities=19%  Similarity=0.533  Sum_probs=56.2

Q ss_pred             CCceEeC----CCceeCCCce-ecccC----CCCC-CcEEcCCCeEEccCCceeccCCC----CCccccCC-CCCC-CCE
Q psy8484          56 THVRICC----EGYEDDHGSC-RPVCE----RECV-FGSCTSPNQCTCSPGYVVINEAS----PNICEPHC-AECV-NGV  119 (132)
Q Consensus        56 ~~~c~C~----~Gy~~~~~~C-~~~C~----~~C~-nG~C~~p~~C~C~~G~~G~~~c~----~~~C~~~C-~~C~-nG~  119 (132)
                      .+.|.|.    +||.|..+++ ...|.    .+|. ||.|+. +.|.|.+||.|.. |+    ...|...= ..|. +|.
T Consensus       503 ~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~-CeC~~~~~~C~~~~g~~C~~~G~  580 (690)
T 3fcs_B          503 CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYY-CNCTTRTDTCMSSNGLLCSGRGK  580 (690)
T ss_dssp             SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSS-SCEECCCTTTBCTTSSBTSSSCE
T ss_pred             CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCC-CccCCCCCcccCCCCCCCCCCCE
Confidence            3578999    9999987654 44565    3688 599987 9999999999997 65    45565310 1576 589


Q ss_pred             EcCCCceeC-CCCC
Q psy8484         120 CSAPNTCDC-LDVL  132 (132)
Q Consensus       120 C~~p~~C~C-~~G~  132 (132)
                      |+. +.|.| .+||
T Consensus       581 C~~-g~C~C~~~Gy  593 (690)
T 3fcs_B          581 CEC-GSCVCIQPGS  593 (690)
T ss_dssp             EET-TEEECCSTTC
T ss_pred             EeC-CEEECCCCCc
Confidence            986 89999 8998

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.35  E-value=5.4e-07  Score=74.76  Aligned_cols=77  Identities=26%  Similarity=0.647  Sum_probs=56.3

Q ss_pred             CCceEeCCCceeCCCc--ee---------cccC--CCCCC-cEEc-CCCeEEccCCceecc---CCCCCccccCCC---C
Q psy8484          56 THVRICCEGYEDDHGS--CR---------PVCE--RECVF-GSCT-SPNQCTCSPGYVVIN---EASPNICEPHCA---E  114 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~--C~---------~~C~--~~C~n-G~C~-~p~~C~C~~G~~G~~---~c~~~~C~~~C~---~  114 (132)
                      .+.|.|.+||+|...+  |.         ..|.  .+|.+ |.|. ..++|.|.+||.|.+   .|.++..++.|.   +
T Consensus       215 ~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~  294 (423)
T 2gy5_A          215 TGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCS  294 (423)
T ss_dssp             TCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCC
T ss_pred             CCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCccccccc
Confidence            5789999999998542  22         2332  35665 7886 468999999999987   255554555665   6


Q ss_pred             CCC-CEEcCCCceeCCCCC
Q psy8484         115 CVN-GVCSAPNTCDCLDVL  132 (132)
Q Consensus       115 C~n-G~C~~p~~C~C~~G~  132 (132)
                      |.| |.|++.+.|.|++||
T Consensus       295 C~ngg~C~~~~~C~C~~G~  313 (423)
T 2gy5_A          295 CNNGEMCDRFQGCLCSPGW  313 (423)
T ss_dssp             CTTCCEEETTTEEECCTTC
T ss_pred             CCCCCEecCCCceECCCCC
Confidence            775 799987779999998

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.34  E-value=3.8e-07  Score=79.97  Aligned_cols=75  Identities=25%  Similarity=0.502  Sum_probs=55.6

Q ss_pred             CCceEeCCCceeCCCcee---------cccCC-----CCC-CcEEcCCCeEEcc----CCceecc-CCCCCccccCCC-C
Q psy8484          56 THVRICCEGYEDDHGSCR---------PVCER-----ECV-FGSCTSPNQCTCS----PGYVVIN-EASPNICEPHCA-E  114 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~---------~~C~~-----~C~-nG~C~~p~~C~C~----~G~~G~~-~c~~~~C~~~C~-~  114 (132)
                      .+.|.|.+||.|..+++.         ..|..     +|. ||.|+ .+.|.|.    +||.|.. +++...|...-. .
T Consensus       457 ~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~  535 (690)
T 3fcs_B          457 CGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEM  535 (690)
T ss_dssp             TTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSB
T ss_pred             CCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCC
Confidence            345899999999876542         23653     488 59998 5999999    9999998 224556764311 5


Q ss_pred             CC-CCEEcCCCceeCCCCC
Q psy8484         115 CV-NGVCSAPNTCDCLDVL  132 (132)
Q Consensus       115 C~-nG~C~~p~~C~C~~G~  132 (132)
                      |. +|.|+. +.|.|.+||
T Consensus       536 C~~~G~C~~-g~C~C~~Gy  553 (690)
T 3fcs_B          536 CSGHGQCSC-GDCLCDSDW  553 (690)
T ss_dssp             GGGSEEEET-TEEEECTTE
T ss_pred             CCCCCEecC-CeeECcCCC
Confidence            66 689987 999999997

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.32  E-value=4.3e-07  Score=66.68  Aligned_cols=76  Identities=30%  Similarity=0.740  Sum_probs=53.7

Q ss_pred             CCceEeCCCceeCCCce-ecccC-CCCC-CcEEc----CC---CeEEccCCceeccCCCCCcccc----CCC-CC-C-CC
Q psy8484          56 THVRICCEGYEDDHGSC-RPVCE-RECV-FGSCT----SP---NQCTCSPGYVVINEASPNICEP----HCA-EC-V-NG  118 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C-~~~C~-~~C~-nG~C~----~p---~~C~C~~G~~G~~~c~~~~C~~----~C~-~C-~-nG  118 (132)
                      .+.|.|.+||+|.+..| +..|. .+|. +|.|+    ..   ..|.|++||.|.. .+...|..    .|. +| . +|
T Consensus        73 ~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~-~~~~~C~~~~~~~C~~~C~~~~~  151 (186)
T 1z1y_A           73 MYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNP-EDEXXCTXTGETACQLXCNTDNE  151 (186)
T ss_dssp             SEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEET-TTTTEEEEEECCCCCCCCCTTTE
T ss_pred             CEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccC-CCCCcceEcCCCcccccccccCc
Confidence            45799999999987666 45564 4688 59998    43   4899999999942 12223331    233 67 5 57


Q ss_pred             EEcC-C--CceeCCCCC
Q psy8484         119 VCSA-P--NTCDCLDVL  132 (132)
Q Consensus       119 ~C~~-p--~~C~C~~G~  132 (132)
                      +|++ +  ++|.|++||
T Consensus       152 ~C~n~~g~y~C~C~~G~  168 (186)
T 1z1y_A          152 VCXNVEGVYXCQCMEGF  168 (186)
T ss_dssp             EEEEETTEEEEEECTTC
T ss_pred             ceecCCCCeeeECCCCC
Confidence            9986 2  589999998

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.29  E-value=2.1e-07  Score=68.41  Aligned_cols=75  Identities=24%  Similarity=0.639  Sum_probs=54.9

Q ss_pred             CCceEeCCCceeC-CCcee--cccC-----CCCCC-cEEcCCC--------eEEccCCceecc-CCCCCccccCCCCCC-
Q psy8484          56 THVRICCEGYEDD-HGSCR--PVCE-----RECVF-GSCTSPN--------QCTCSPGYVVIN-EASPNICEPHCAECV-  116 (132)
Q Consensus        56 ~~~c~C~~Gy~~~-~~~C~--~~C~-----~~C~n-G~C~~p~--------~C~C~~G~~G~~-~c~~~~C~~~C~~C~-  116 (132)
                      .+.|.|.+||+|. ...|+  ..|.     .+|.| |+|+...        .|.|.+||.|.. .|.++.|...  +|. 
T Consensus        24 ~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~--~C~~  101 (186)
T 1z1y_A           24 HFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYX--NCGE  101 (186)
T ss_dssp             CEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTC--CCCT
T ss_pred             CeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCC--CCCC
Confidence            4679999999986 34564  3464     46875 8998543        799999999985 3444556544  788 


Q ss_pred             CCEEc----CC---CceeCCCCC
Q psy8484         117 NGVCS----AP---NTCDCLDVL  132 (132)
Q Consensus       117 nG~C~----~p---~~C~C~~G~  132 (132)
                      +|.|+    +.   +.|.|++||
T Consensus       102 ~g~C~~~~~~~~g~~~C~C~~Gy  124 (186)
T 1z1y_A          102 SGECIVEYLSEIQSAGCSCAIGX  124 (186)
T ss_dssp             TEEEEEEEETTEEEEEEEECTEE
T ss_pred             CCEEeeCCcCCCCCceEECCCCC
Confidence            58998    53   599999987

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.25  E-value=7.4e-07  Score=78.14  Aligned_cols=74  Identities=24%  Similarity=0.582  Sum_probs=53.4

Q ss_pred             CCceEeCCCceeCCCceec----------ccCC-----CCC-CcEEcCCCeEEcc------CCceeccCCC--CCccccC
Q psy8484          56 THVRICCEGYEDDHGSCRP----------VCER-----ECV-FGSCTSPNQCTCS------PGYVVINEAS--PNICEPH  111 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~----------~C~~-----~C~-nG~C~~p~~C~C~------~G~~G~~~c~--~~~C~~~  111 (132)
                      .+.|.|.+||.|..++|..          .|..     +|. ||.|+ .++|.|.      +||.|.. |+  ...|...
T Consensus       445 ~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G~~G~~-Ce~~~~~C~~~  522 (687)
T 3k6s_B          445 CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIYGQY-CECDTINCERY  522 (687)
T ss_dssp             SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCCEESTT-SCEESSCSCEE
T ss_pred             CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCCccccc-cccccccccCC
Confidence            4679999999999766522          3643     387 49999 5899999      9999997 54  4556532


Q ss_pred             CC-CCC---CCEEcCCCceeCCCCC
Q psy8484         112 CA-ECV---NGVCSAPNTCDCLDVL  132 (132)
Q Consensus       112 C~-~C~---nG~C~~p~~C~C~~G~  132 (132)
                      =. .|.   +|.|+. ++|.|.+||
T Consensus       523 ~~~~C~~~~~G~C~~-g~C~C~~G~  546 (687)
T 3k6s_B          523 NGQVCGGPGRGLCFC-GKCRCHPGF  546 (687)
T ss_dssp             TTEETSHHHHEEEET-TEEEECTTC
T ss_pred             CCcCcCCCCCCeEEC-CEEEcCCCC
Confidence            00 354   578874 788888887

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=98.17  E-value=9.4e-07  Score=66.38  Aligned_cols=33  Identities=24%  Similarity=0.710  Sum_probs=29.7

Q ss_pred             ce-ecccCCCCCC-cEEcCCCeEEccCCceeccCCC
Q psy8484          71 SC-RPVCERECVF-GSCTSPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        71 ~C-~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~  104 (132)
                      .| .|+|.++|.| |.|++|++|+|++||.|.. |+
T Consensus       145 ~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~-C~  179 (188)
T 2ygo_A          145 TCQQAECPGGCRNGGFCNERRICECPDGFHGPH-CE  179 (188)
T ss_dssp             EECCCCCTTCCCTTCEECTTSCEECCTTCBTTT-TC
T ss_pred             cccCCccCCCCCCCCEeCCCCcccCcCCCCCCC-Cc
Confidence            56 7899999997 8999999999999999987 54

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.14  E-value=1.8e-06  Score=75.77  Aligned_cols=73  Identities=27%  Similarity=0.616  Sum_probs=54.4

Q ss_pred             CceEeC------CCceeCCCce-ecccCC----CCC---CcEEcCCCeEEccCCceeccCCC----CCccccCCC-CCC-
Q psy8484          57 HVRICC------EGYEDDHGSC-RPVCER----ECV---FGSCTSPNQCTCSPGYVVINEAS----PNICEPHCA-ECV-  116 (132)
Q Consensus        57 ~~c~C~------~Gy~~~~~~C-~~~C~~----~C~---nG~C~~p~~C~C~~G~~G~~~c~----~~~C~~~C~-~C~-  116 (132)
                      ..|.|.      +||.|..+++ ...|..    .|.   ||.|+. ++|.|.+||.|.. |+    ...|...=. .|. 
T Consensus       493 G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~-Cec~~~~~~C~~~~g~~Cs~  570 (687)
T 3k6s_B          493 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSA-CQCERTTEGCLNPRRVECSG  570 (687)
T ss_dssp             TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET-TEEEECTTCCSTT-SCSCCSSCTTBCTTCSBTSS
T ss_pred             CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCC-CccCCCCCCCCCCCCCCCCC
Confidence            478999      9999987665 445652    476   589985 8999999999997 55    345544201 466 


Q ss_pred             CCEEcCCCceeCCCCC
Q psy8484         117 NGVCSAPNTCDCLDVL  132 (132)
Q Consensus       117 nG~C~~p~~C~C~~G~  132 (132)
                      +|.|+. ++|.|.+||
T Consensus       571 ~G~C~~-g~C~C~~Gy  585 (687)
T 3k6s_B          571 RGRCRC-NVCECHSGY  585 (687)
T ss_dssp             SCCBCS-SCBCCSTTC
T ss_pred             CCcCCC-CEEECCCCC
Confidence            589987 899999998

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.12  E-value=1.1e-06  Score=58.23  Aligned_cols=68  Identities=19%  Similarity=0.410  Sum_probs=46.1

Q ss_pred             CceEeCCCceeCCCceeccc-CCCCCCcEEcCCCeEEccCCceeccCCC---CCccccCCCCCCC-CEEcC-----CCce
Q psy8484          57 HVRICCEGYEDDHGSCRPVC-ERECVFGSCTSPNQCTCSPGYVVINEAS---PNICEPHCAECVN-GVCSA-----PNTC  126 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~~C~~~C-~~~C~nG~C~~p~~C~C~~G~~G~~~c~---~~~C~~~C~~C~n-G~C~~-----p~~C  126 (132)
                      +.|.|.+||+|.... +..| ..+|.|+  .....|.|++||.  . |+   .+.|.+.  +|.| |+|++     .+.|
T Consensus         2 y~C~C~~g~~g~~c~-~~~c~~~pC~n~--~~~y~C~C~~G~~--~-C~~~~~~~C~~~--pC~ngg~C~~~~~~~~~~C   73 (91)
T 1tpg_A            2 YQVICRDEKTQMIYQ-QHQSWLRPVLRS--NRVEYCWCNSGRA--Q-CHSVPVKSCSEP--RCFNGGTCQQALYFSDFVC   73 (91)
T ss_dssp             CCCCCBCSSSCCBCC-SSCEEEEECSSS--SCEEEEECSSSCC--B-CCEECEEECSSC--CSCTTCEEEEESSSSCEEE
T ss_pred             eeeECCCCCcCCeEC-CCcccCCccccC--CCCcEeECCCCCc--c-cccCcCCcccCC--CCCCCCEeecCCCCCCeEe
Confidence            568999999986321 2222 2356654  2345799999997  3 53   3556554  8987 79984     3589


Q ss_pred             eCCCCC
Q psy8484         127 DCLDVL  132 (132)
Q Consensus       127 ~C~~G~  132 (132)
                      .|++||
T Consensus        74 ~C~~G~   79 (91)
T 1tpg_A           74 QCPEGF   79 (91)
T ss_dssp             ECCTTC
T ss_pred             ECCCCC
Confidence            999998

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.09  E-value=1.1e-06  Score=60.54  Aligned_cols=74  Identities=26%  Similarity=0.659  Sum_probs=49.1

Q ss_pred             CCceEeCCCceeCCC---ceecccC-CCCCCcEEcC--CCeEEccCCce---eccCCCCCccccCCCCCCCCEEcC---C
Q psy8484          56 THVRICCEGYEDDHG---SCRPVCE-RECVFGSCTS--PNQCTCSPGYV---VINEASPNICEPHCAECVNGVCSA---P  123 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~---~C~~~C~-~~C~nG~C~~--p~~C~C~~G~~---G~~~c~~~~C~~~C~~C~nG~C~~---p  123 (132)
                      .+.|.|.+||+|...   .|+..|. .+|. +.|+.  ...|.|++||.   |...-+++.|... .+| +++|++   .
T Consensus        23 ~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~-~~C-~~~C~n~~g~   99 (118)
T 1dx5_I           23 SYLCVCAEGFAPIPHEPHRCQMFCNQTACP-ADCDPNTQASCECPEGYILDDGFICTDIDECENG-GFC-SGVCHNLPGT   99 (118)
T ss_dssp             CEEEECCTTEEEETTEEEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEETTTEEEECCHHHHC-SSC-SSEEEECSSS
T ss_pred             CEEeECCCCccccCCCCCccccccCCCCCC-CcccCCCCeEeECCCCccCCCCCccccccccCCC-CCC-cCeEEeCCCC
Confidence            467999999999742   4543332 1222 45654  46899999999   4431134566651 278 789986   3


Q ss_pred             CceeCCCCC
Q psy8484         124 NTCDCLDVL  132 (132)
Q Consensus       124 ~~C~C~~G~  132 (132)
                      +.|.|++||
T Consensus       100 y~C~C~~G~  108 (118)
T 1dx5_I          100 FECICGPDS  108 (118)
T ss_dssp             EEEEECSSS
T ss_pred             EEEECCCCC
Confidence            699999998

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.09  E-value=5.5e-06  Score=58.26  Aligned_cols=77  Identities=23%  Similarity=0.599  Sum_probs=53.1

Q ss_pred             CCceEeCCCceeC-------CCcee--cccCC----CCCC-cEEcC---CCeEEccCCceecc-----------CC-CCC
Q psy8484          56 THVRICCEGYEDD-------HGSCR--PVCER----ECVF-GSCTS---PNQCTCSPGYVVIN-----------EA-SPN  106 (132)
Q Consensus        56 ~~~c~C~~Gy~~~-------~~~C~--~~C~~----~C~n-G~C~~---p~~C~C~~G~~G~~-----------~c-~~~  106 (132)
                      .+.|.|.+||+|.       +..|+  ..|..    +|.+ +.|+.   ...|.|++||.|..           .| +++
T Consensus        18 ~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~did   97 (143)
T 2bou_A           18 ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVD   97 (143)
T ss_dssp             SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECC
T ss_pred             CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCcc
Confidence            4689999999984       24563  34643    6884 89974   35799999999973           12 334


Q ss_pred             ccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         107 ICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       107 ~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      .|...=.+|.+ +.|++.   +.|.|++||
T Consensus        98 eC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy  127 (143)
T 2bou_A           98 ECSSGQHQCDSSTVCFNTVGSYSCRCRPGW  127 (143)
T ss_dssp             HHHHTCCCCCTTSEEEECSSCEEEECCSSS
T ss_pred             CccCcCCCCCCCCEEECCCCCEEeeCCCCc
Confidence            55431016775 799873   589999998

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.99  E-value=2.6e-06  Score=71.19  Aligned_cols=52  Identities=33%  Similarity=0.731  Sum_probs=18.7

Q ss_pred             eeecCCCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCC
Q psy8484          51 EYMEDTHVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        51 ~~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~  104 (132)
                      +.+.....|.|.+||+|..++ ++.|..+|.| |+|+.+++|.|.+||.|.. |+
T Consensus       402 G~C~~~~~C~C~~G~~G~~C~-~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~-C~  454 (463)
T 2wg3_C          402 GYCTPTGKCCCSPGWEGDFCR-TAKCEPACRHGGVCVRPNKCLCKKGYLGPQ-CE  454 (463)
T ss_dssp             EEECTTSCEEECTTEESTTSC-EECC-----------------------------
T ss_pred             CccCCCCeECCCCCcCCCcCC-cCcCCCCCCCCCEECCCCEEECCCCcccCC-CC
Confidence            345555789999999998543 6788889997 8999999999999999987 54

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.78  E-value=2.3e-05  Score=54.67  Aligned_cols=52  Identities=31%  Similarity=0.771  Sum_probs=37.9

Q ss_pred             CCCCC-cEEcC-----CCeEEccCCceeccCCCC--------------CccccCCCCCCC-CEEc-------C---CCce
Q psy8484          78 RECVF-GSCTS-----PNQCTCSPGYVVINEASP--------------NICEPHCAECVN-GVCS-------A---PNTC  126 (132)
Q Consensus        78 ~~C~n-G~C~~-----p~~C~C~~G~~G~~~c~~--------------~~C~~~C~~C~n-G~C~-------~---p~~C  126 (132)
                      .+|.| |+|+.     ...|.|++||+|.. |+.              +.|.+.  +|.| |.|+       +   .++|
T Consensus         6 ~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~-C~~~~~~~~~~~~c~~~~~C~~~--~C~~~g~C~~~~~~~~~~~~~~~C   82 (143)
T 4d90_A            6 NPCENGGICLPGLADGSFSCECPDGFTDPN-CSSVVEVASDEEEPTSAGPCTPN--PCHNGGTCEISEAYRGDTFIGYVC   82 (143)
T ss_dssp             CCCGGGCEEEC-----CCEEECCTTCCTTT-TCSCCCCTTTTTSCCCCCTTSSC--CCCTTCEEEECCCEETTEECCEEE
T ss_pred             CcCCCCCEeeCCCCCCCEEeECCCCCCCCC-CccCccccccccccccCCcCCCC--CCCCCCEecCCCccccCCCCCeEe
Confidence            47885 89984     35899999999986 432              234333  6876 7998       2   4689


Q ss_pred             eCCCCC
Q psy8484         127 DCLDVL  132 (132)
Q Consensus       127 ~C~~G~  132 (132)
                      .|++||
T Consensus        83 ~C~~G~   88 (143)
T 4d90_A           83 KCPRGF   88 (143)
T ss_dssp             ECCTTE
T ss_pred             ECcCCC
Confidence            999997

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.75  E-value=1.5e-05  Score=51.38  Aligned_cols=53  Identities=26%  Similarity=0.710  Sum_probs=36.4

Q ss_pred             CCCCCcEEcC---CCeEEccCCce--eccCCCCCccc-cCCCCCCCCEEcCC---CceeCCCCC
Q psy8484          78 RECVFGSCTS---PNQCTCSPGYV--VINEASPNICE-PHCAECVNGVCSAP---NTCDCLDVL  132 (132)
Q Consensus        78 ~~C~nG~C~~---p~~C~C~~G~~--G~~~c~~~~C~-~~C~~C~nG~C~~p---~~C~C~~G~  132 (132)
                      .+|.||.|+.   ...|.|++||.  |...-+++.|. +.  +|.||+|++.   +.|.|++||
T Consensus        12 ~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~--~C~~~~C~n~~g~y~C~C~~G~   73 (82)
T 1emn_A           12 DVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGN--PCGNGTCKNVIGGFECTCEEGF   73 (82)
T ss_dssp             TSCSSSEECCCSSCCCEECCTTEEEETTEEEECCGGGTCC--TTSSSCEEECSSSEEECCSSSS
T ss_pred             CCcCCCEEEecCCCEEEECCCCeECCCCccCCcccccCCC--CCCCCEeECCCCCEEeECCCCe
Confidence            4677788874   35799999997  44311345565 22  7778888862   589998887

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=97.71  E-value=2.7e-05  Score=54.67  Aligned_cols=57  Identities=26%  Similarity=0.631  Sum_probs=41.4

Q ss_pred             cCCCCC-CcEEcCCCeEEccCCceec--------cCC-CCCccccCCC-CCC-CCEEcCC---CceeCCCCC
Q psy8484          76 CERECV-FGSCTSPNQCTCSPGYVVI--------NEA-SPNICEPHCA-ECV-NGVCSAP---NTCDCLDVL  132 (132)
Q Consensus        76 C~~~C~-nG~C~~p~~C~C~~G~~G~--------~~c-~~~~C~~~C~-~C~-nG~C~~p---~~C~C~~G~  132 (132)
                      |..+|. ||+|+....|.|++||.|.        ..| +++.|...=. +|. ++.|++.   ++|.|++||
T Consensus         5 C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy   76 (143)
T 2bou_A            5 CARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY   76 (143)
T ss_dssp             CCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred             CcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence            566788 5999998999999999994        124 4556654311 576 4799862   589999997

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=97.61  E-value=4.7e-05  Score=53.14  Aligned_cols=52  Identities=27%  Similarity=0.672  Sum_probs=39.6

Q ss_pred             CCCCC-cEEcCC---CeEEccCCceeccCCC--CCccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484          78 RECVF-GSCTSP---NQCTCSPGYVVINEAS--PNICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~p---~~C~C~~G~~G~~~c~--~~~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      .+|.| |+|+..   ..|.|++||.|.. |+  .+.|...  +|.+ |+|++.   ++|.|++||
T Consensus        13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~-C~~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~   74 (135)
T 2vj3_A           13 NPCEHAGKCINTLGSFECQCLQGYTGPR-CEIDVNECVSN--PCQNDATCLDQIGEFQCICMPGY   74 (135)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTT-SCEECCTTTTC--CCCSSCEEEECSSCEEEECCTTE
T ss_pred             CCCCCCCEeECCCCCEEEECCCCCcCCc-ccccCccCCCC--CCCCCCEEeCCCCCceeeCCCCC
Confidence            57885 899753   3899999999986 53  4556544  7875 799863   589999997

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.54  E-value=6e-05  Score=57.45  Aligned_cols=52  Identities=27%  Similarity=0.567  Sum_probs=38.2

Q ss_pred             CCC-CcEEcCCCeEEccCCceecc-CCCCC---------ccccCCC--CCC-CCEEcCCCceeCCCCC
Q psy8484          79 ECV-FGSCTSPNQCTCSPGYVVIN-EASPN---------ICEPHCA--ECV-NGVCSAPNTCDCLDVL  132 (132)
Q Consensus        79 ~C~-nG~C~~p~~C~C~~G~~G~~-~c~~~---------~C~~~C~--~C~-nG~C~~p~~C~C~~G~  132 (132)
                      .|. ||.|+. +.|.|++||.|.. +|+..         .|.....  .|. +|+|+. ++|.|.+||
T Consensus        97 ~Csg~G~C~~-g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw  162 (217)
T 2p28_B           97 LCHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSD  162 (217)
T ss_dssp             TTTTSEEEET-TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCC
T ss_pred             ccCCCceEEC-CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCC
Confidence            566 699996 9999999999998 22221         3543322  576 589985 899999995

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.25  E-value=0.00023  Score=61.94  Aligned_cols=75  Identities=21%  Similarity=0.551  Sum_probs=51.7

Q ss_pred             Cce-EeCCCceeCCCcee--cccC-CC--CCC-c---EEcC---CCeEE-ccCCceeccCCC----------------CC
Q psy8484          57 HVR-ICCEGYEDDHGSCR--PVCE-RE--CVF-G---SCTS---PNQCT-CSPGYVVINEAS----------------PN  106 (132)
Q Consensus        57 ~~c-~C~~Gy~~~~~~C~--~~C~-~~--C~n-G---~C~~---p~~C~-C~~G~~G~~~c~----------------~~  106 (132)
                      +.| .|.+||+|.+..|+  -.|. .+  |.+ +   +|+.   ..+|. |++||.|.. |.                ..
T Consensus        25 y~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~-c~g~g~~~~~~dg~~C~did  103 (634)
T 1yo8_A           25 WSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQ-PVGVGLEAAKTEKQVCEPEN  103 (634)
T ss_dssp             EEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECC-CEESSSHHHHSCCCCEEECC
T ss_pred             eECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCc-cccccccccccCCCcccccc
Confidence            579 89999998666674  3464 24  886 6   7974   35798 999999975 22                23


Q ss_pred             ccccCCCCCCC-CEEcC-C------CceeCCCCC
Q psy8484         107 ICEPHCAECVN-GVCSA-P------NTCDCLDVL  132 (132)
Q Consensus       107 ~C~~~C~~C~n-G~C~~-p------~~C~C~~G~  132 (132)
                      .|...=.+|.+ ++|++ +      +.|.|++||
T Consensus       104 eC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy  137 (634)
T 1yo8_A          104 PCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY  137 (634)
T ss_dssp             TTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTE
T ss_pred             cccCCCcccccCccccccccccccceeeeccCCc
Confidence            44321016874 79985 2      489999997

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.18  E-value=7.8e-05  Score=48.29  Aligned_cols=54  Identities=26%  Similarity=0.599  Sum_probs=33.8

Q ss_pred             CCCCcEEcC---CCeEEccCCceecc----CC-CCCccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484          79 ECVFGSCTS---PNQCTCSPGYVVIN----EA-SPNICEPHCAECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus        79 ~C~nG~C~~---p~~C~C~~G~~G~~----~c-~~~~C~~~C~~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      +|.||.|+.   ...|.|++||.+..    .| ++++|...=..|.+|+|++ +  +.|.|++||
T Consensus        12 ~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~   76 (86)
T 1lmj_A           12 LCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGH   76 (86)
T ss_dssp             TTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTS
T ss_pred             CCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCc
Confidence            377778864   34788999998431    12 3445543300366788886 2  589998887

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.14  E-value=0.00033  Score=54.69  Aligned_cols=53  Identities=38%  Similarity=0.877  Sum_probs=29.7

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCC--CCCccccCC-CCCCCCEEcC---CCceeCCCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEA--SPNICEPHC-AECVNGVCSA---PNTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c--~~~~C~~~C-~~C~nG~C~~---p~~C~C~~G~  132 (132)
                      .+|.| |.|+.   ...|.|.+||.|.. |  +.++|...= .+|.| .|++   .+.|.|++||
T Consensus        11 ~pC~~~g~C~~~~~~~~C~C~~g~~g~~-C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~   73 (317)
T 3h5c_B           11 QPCLHNGSCQDSIWGYTCTCSPGYEGSN-CELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGY   73 (317)
T ss_dssp             CCCTTTCCCCCCSSSCCCCCSSSCCSSS-SCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTE
T ss_pred             CCCCCCCEeECCCCCeEEECCCCCcCCc-cccCcccCCCCCCCCCcC-ccccCCCeeEEeccccc
Confidence            35664 66653   24577777777765 4  344554410 15655 6665   2567777665

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.08  E-value=0.00042  Score=47.02  Aligned_cols=31  Identities=26%  Similarity=0.619  Sum_probs=13.3

Q ss_pred             CeEEccCCceeccCCCCCccccCCC-CCCC-CEEc
Q psy8484          89 NQCTCSPGYVVINEASPNICEPHCA-ECVN-GVCS  121 (132)
Q Consensus        89 ~~C~C~~G~~G~~~c~~~~C~~~C~-~C~n-G~C~  121 (132)
                      ..|.|.+||.|..  +...|.+.-. +|.+ +.|+
T Consensus        75 y~C~C~~G~~~~~--~g~~C~~~~~~pC~~~~~~i  107 (114)
T 1aut_L           75 RRCSCAPGYKLGD--DLLQCHPAVKFPCGRPWKRM  107 (114)
T ss_dssp             EEEECCTTEEECT--TSSCEEECSSSCTTCCC---
T ss_pred             EEeECCCCeeECC--CCCccCcCcccCCCCCCccC
Confidence            3466666666653  3334444322 5543 3444

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.02  E-value=0.00046  Score=44.25  Aligned_cols=46  Identities=26%  Similarity=0.525  Sum_probs=35.3

Q ss_pred             CCceEeCCCceeCCCcee--cccC--CCCCCcEEcC---CCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDDHGSCR--PVCE--RECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~--~~C~--~~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+.|.|.+||++.+..|+  ..|.  .+|.||+|+.   ...|.|++||.|..
T Consensus        25 ~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           25 SYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             CCCEECCTTEEEETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCS
T ss_pred             CEEEECCCCeECCCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCC
Confidence            568999999986655663  3453  5788899974   35799999999875

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.00  E-value=0.00047  Score=49.02  Aligned_cols=52  Identities=23%  Similarity=0.643  Sum_probs=35.0

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCCC-CccccCCC-CCCCCEE-cC---CCceeCCCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEASP-NICEPHCA-ECVNGVC-SA---PNTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~-~~C~~~C~-~C~nG~C-~~---p~~C~C~~G~  132 (132)
                      .+|.| |+|+.   ...|.|++||.|.. |.. +.|... . +|.+ .| ++   .+.|.|++||
T Consensus        54 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~-C~~~deC~~~-~~~C~~-~C~~n~~g~y~C~C~~Gy  115 (146)
T 1x7a_L           54 NPCLNGGLCKDDINSYECWCQVGFEGKN-CELDATCNIK-NGRCKQ-FCKTGADSKVLCSCTTGY  115 (146)
T ss_dssp             CSSCTTCEEEECSSCEEEECCSSEESTT-TCEECCTTSG-GGSCSS-BCCCCSSSCCCCBCCTTE
T ss_pred             CCCCCCCEeECCCCCEEEecCCCCcCCc-CCCCccccCC-CCCCcC-CCCCCCCCCEEeEcCCCc
Confidence            57886 89974   35799999999986 432 334321 1 4555 77 54   3689999987

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=97.00  E-value=0.00057  Score=44.81  Aligned_cols=44  Identities=25%  Similarity=0.665  Sum_probs=32.8

Q ss_pred             CCceEeCCCceeCCCcee----cccC-CCCCC-cEEc-----CCCeEEccCCceeccCCC
Q psy8484          56 THVRICCEGYEDDHGSCR----PVCE-RECVF-GSCT-----SPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~----~~C~-~~C~n-G~C~-----~p~~C~C~~G~~G~~~c~  104 (132)
                      .+.|.|.+||+    .|+    ..|. .+|.| |+|+     ....|.|++||.|.. |+
T Consensus        31 ~y~C~C~~G~~----~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~-Ce   85 (91)
T 1tpg_A           31 VEYCWCNSGRA----QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS-CE   85 (91)
T ss_dssp             EEEEECSSSCC----BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSS-CC
T ss_pred             CcEeECCCCCc----ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCc-CC
Confidence            34699999997    342    3453 57997 8997     345799999999987 54

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=96.97  E-value=0.00037  Score=61.40  Aligned_cols=44  Identities=16%  Similarity=0.310  Sum_probs=37.3

Q ss_pred             eEeCCCceeCCCceecccCCCCC-CcEEcCCCeEEccCCceeccCCC
Q psy8484          59 RICCEGYEDDHGSCRPVCERECV-FGSCTSPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        59 c~C~~Gy~~~~~~C~~~C~~~C~-nG~C~~p~~C~C~~G~~G~~~c~  104 (132)
                      ..|.+||+|.+..-.+.|...|. ||+|+. ++|.|.+||.|.+ |+
T Consensus       520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~-C~  564 (725)
T 2e26_A          520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLY-CD  564 (725)
T ss_dssp             CCTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTT-SC
T ss_pred             CccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCC-cC
Confidence            47999999985443488888898 899998 9999999999987 54

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=96.95  E-value=0.0003  Score=48.12  Aligned_cols=52  Identities=25%  Similarity=0.830  Sum_probs=35.9

Q ss_pred             CCCCCcEEcCC----CeEEccCCceeccCCCCCccccCCC--CCCCCEEcC--CCceeCCCCC
Q psy8484          78 RECVFGSCTSP----NQCTCSPGYVVINEASPNICEPHCA--ECVNGVCSA--PNTCDCLDVL  132 (132)
Q Consensus        78 ~~C~nG~C~~p----~~C~C~~G~~G~~~c~~~~C~~~C~--~C~nG~C~~--p~~C~C~~G~  132 (132)
                      .+|.| +|+..    .+|.|++||.|.. .+.+.|...|.  +|. +.|++  .+.|.|++||
T Consensus        10 ~pC~~-~C~~~~~g~y~C~C~~Gy~g~~-~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy   69 (118)
T 1dx5_I           10 ANCEY-QCQPLDQTSYLCVCAEGFAPIP-HEPHRCQMFCNQTACP-ADCDPNTQASCECPEGY   69 (118)
T ss_dssp             CCCSS-EEEECSSSCEEEECCTTEEEET-TEEEEEEECCCSSEEE-CEECTTSTTCEECCTTE
T ss_pred             CCCCC-CCCCCCCCCEEeECCCCccccC-CCCCccccccCCCCCC-CcccCCCCeEeECCCCc
Confidence            46765 78643    5799999999985 44455655443  333 56765  3699999997

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.84  E-value=0.00013  Score=43.40  Aligned_cols=37  Identities=19%  Similarity=0.517  Sum_probs=28.6

Q ss_pred             CceEeCCCceeCCCceecccCCCCCC-cEEcC-----C--CeEEccCCceeccCCC
Q psy8484          57 HVRICCEGYEDDHGSCRPVCERECVF-GSCTS-----P--NQCTCSPGYVVINEAS  104 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~-----p--~~C~C~~G~~G~~~c~  104 (132)
                      ..|.|.+||.          ..+|.| |+|+.     .  ..|.|++||+|.. |+
T Consensus         3 ~~C~C~~g~~----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~-Ce   47 (52)
T 3ca7_A            3 PTYKCPETFD----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQR-CE   47 (52)
T ss_dssp             CCBCCCHHHH----------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTT-SC
T ss_pred             eeeECCCCCc----------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCC-Cc
Confidence            4688999986          247887 89984     2  3799999999986 54

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=96.80  E-value=0.00088  Score=47.16  Aligned_cols=52  Identities=29%  Similarity=0.601  Sum_probs=36.0

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCCC--CccccCCCCCCC-C---EEcC----CCceeCCCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEASP--NICEPHCAECVN-G---VCSA----PNTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~--~~C~~~C~~C~n-G---~C~~----p~~C~C~~G~  132 (132)
                      .+|.| |+|+.   ...|.|++||.|.. |+.  +.|.+ | .|.| +   .|++    .+.|.|++||
T Consensus        53 ~pC~n~g~C~~~~g~y~C~C~~G~~G~~-C~~~~~~c~~-c-~~~~~~C~~~C~~~~g~~y~C~C~~Gy  118 (142)
T 2c4f_L           53 SPCQNGGSCKDQLQSYICFCLPAFEGRN-CETHKDDQLI-C-VNENGGCEQYCSDHTGTKRSCRCHEGY  118 (142)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTEESTT-SCEEGGGCCS-T-TTGGGGCSSEEECCTTSCCEEECCTTE
T ss_pred             CCcCCCCEEeCCCCCEEeeCCCCccCCc-cccCcccccc-c-cCCCCCccCEeECCCCCCEEEECCCCc
Confidence            57986 89974   34899999999987 653  33321 2 3334 3   7875    3589999997

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=96.78  E-value=0.00024  Score=53.29  Aligned_cols=53  Identities=25%  Similarity=0.657  Sum_probs=12.9

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCCC---CccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEASP---NICEPHCAECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~---~~C~~~C~~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      .+|.| |+|+.   ...|.|++||.|.. |..   +.|...=.+|.+ .|++ +  +.|.|++||
T Consensus        48 ~pC~ngg~C~n~~g~y~C~C~~Gf~G~~-Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy  110 (195)
T 1nfu_B           48 SPCQNQGKCKDGLGEYTCTCLEGFEGKN-CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGY  110 (195)
T ss_dssp             ----------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTE
T ss_pred             CCCCCCCEeECCCCCeeEeCCCCceecc-ccccccccccCCCCCCCC-EeECCCCCeEEECCCCc
Confidence            35665 66753   34577777777765 432   335432004554 6664 2  467777775

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=96.71  E-value=0.0003  Score=49.22  Aligned_cols=52  Identities=25%  Similarity=0.676  Sum_probs=13.9

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCCC---CccccCCC-CCCCCEEcC-C--CceeCCCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEASP---NICEPHCA-ECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~---~~C~~~C~-~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      .+|.| |+|+.   ...|.|++||.|.. |..   +.|... . +|.+ .|++ +  +.|.|++||
T Consensus        48 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~-C~~~i~d~C~~~-~~~C~~-~C~~~~g~y~C~C~~Gy  110 (134)
T 2vh0_B           48 SPCQNQGKCKDGLGEYTCTCLEGFEGKN-CELFTRKLCSLD-NGDCDQ-FCHEEQNSVVCSCARGY  110 (134)
T ss_dssp             ----------------------------------CCGGGTG-GGGCSS-EEEEETTEEEEECCTTE
T ss_pred             CCCCCcCCcccCCCCEEeeCCCCccCCc-cccCCCCccccC-CCCCCC-EeECCCCCEEEECCCCc
Confidence            35775 67763   34688888888876 543   335432 1 4555 6765 2  478888776

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=96.67  E-value=0.001  Score=49.76  Aligned_cols=23  Identities=35%  Similarity=1.009  Sum_probs=19.7

Q ss_pred             cCCC-CCCC-CEEcCCCceeCCCCC
Q psy8484         110 PHCA-ECVN-GVCSAPNTCDCLDVL  132 (132)
Q Consensus       110 ~~C~-~C~n-G~C~~p~~C~C~~G~  132 (132)
                      +.|. +|.| |.|++|++|.|++||
T Consensus       149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw  173 (188)
T 2ygo_A          149 AECPGGCRNGGFCNERRICECPDGF  173 (188)
T ss_dssp             CCCTTCCCTTCEECTTSCEECCTTC
T ss_pred             CccCCCCCCCCEeCCCCcccCcCCC
Confidence            5555 7776 799999999999998

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=96.66  E-value=0.00025  Score=49.94  Aligned_cols=43  Identities=26%  Similarity=0.566  Sum_probs=30.7

Q ss_pred             CeEEccCCce---eccCC-CCCccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484          89 NQCTCSPGYV---VINEA-SPNICEPHCAECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus        89 ~~C~C~~G~~---G~~~c-~~~~C~~~C~~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      ..|.|++||.   |.. | ++++|...=..|.||+|++ +  ++|.|++||
T Consensus        88 ~~C~C~~Gy~~~~g~~-C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy  137 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQ-CEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGM  137 (147)
T ss_dssp             CCTTTCTTEEEEETTE-EEECCHHHHSTTCSSSSEEEEETTEEEEECCTTC
T ss_pred             CcccCCCccccCCCCc-cCccccccCCCCCCCCCEEECCCCCEEeeCCCCC
Confidence            4678999996   544 3 4566763301588899997 3  699999998

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.44  E-value=0.0015  Score=37.95  Aligned_cols=26  Identities=31%  Similarity=0.815  Sum_probs=21.2

Q ss_pred             CCCCCcEEcC-----CCeEEccCCceeccCCC
Q psy8484          78 RECVFGSCTS-----PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~nG~C~~-----p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.||+|+.     ...|+|++||+|.. |+
T Consensus        12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~-Ce   42 (46)
T 1k36_A           12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVR-CE   42 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTCSSTT-SC
T ss_pred             CCCCCCEeeccCCCCCEEEECCCCCccCC-CC
Confidence            5899999973     34799999999987 54

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.39  E-value=0.00019  Score=51.25  Aligned_cols=29  Identities=21%  Similarity=0.479  Sum_probs=19.6

Q ss_pred             CCCccccCCCCCCCCEEcCC---CceeCCCCC
Q psy8484         104 SPNICEPHCAECVNGVCSAP---NTCDCLDVL  132 (132)
Q Consensus       104 ~~~~C~~~C~~C~nG~C~~p---~~C~C~~G~  132 (132)
                      ++++|...=.+|.||+|++.   ++|.|++||
T Consensus       121 dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy  152 (162)
T 1uzk_A          121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGY  152 (162)
T ss_dssp             ECCHHHHCGGGGBTSEEEECSSCEEEECCTTC
T ss_pred             ccccccCCCCCcCCCEeEcCCCCEEeeCCCCc
Confidence            34455432005888999973   699999998

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=96.11  E-value=0.0036  Score=37.80  Aligned_cols=26  Identities=27%  Similarity=0.551  Sum_probs=20.8

Q ss_pred             CCCCC-cEEc--------CCCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCT--------SPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~--------~p~~C~C~~G~~G~~~c~  104 (132)
                      .+|+| |+|.        ....|.|++||+|.. |+
T Consensus        14 ~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~-CE   48 (55)
T 3u7u_G           14 TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDR-CQ   48 (55)
T ss_dssp             TTSCTTCEEEEECCC--CCCEEEEECTTEESTT-SC
T ss_pred             CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCC-cC
Confidence            58998 8994        235799999999997 54

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.03  E-value=0.004  Score=35.56  Aligned_cols=25  Identities=24%  Similarity=0.521  Sum_probs=20.4

Q ss_pred             CCCC-cEEc-----CCCeEEccCCceeccCCC
Q psy8484          79 ECVF-GSCT-----SPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        79 ~C~n-G~C~-----~p~~C~C~~G~~G~~~c~  104 (132)
                      +|.| |+|+     ....|.|++||+|.. |+
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~-Ce   40 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDR-CQ   40 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTT-TC
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCc-CC
Confidence            7997 8997     345799999999986 54

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=95.91  E-value=0.0032  Score=52.89  Aligned_cols=44  Identities=25%  Similarity=0.606  Sum_probs=13.0

Q ss_pred             CCeEEccCCceeccCCC---CCccc-----cCCC--CCCC-CE----EcC-CCceeCCCCC
Q psy8484          88 PNQCTCSPGYVVINEAS---PNICE-----PHCA--ECVN-GV----CSA-PNTCDCLDVL  132 (132)
Q Consensus        88 p~~C~C~~G~~G~~~c~---~~~C~-----~~C~--~C~n-G~----C~~-p~~C~C~~G~  132 (132)
                      .++|.|.+||.|.. |+   ++..+     ..|.  +|.+ |.    |.. .++|.|++||
T Consensus       459 tg~C~C~~g~~G~~-Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~  518 (525)
T 4aqs_A          459 TGYCYCKRLVTGQR-CDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHM  518 (525)
T ss_dssp             TCCBCBCTTCCSTT-TCC-------------------------------------------
T ss_pred             CCEEECCCCCcCCC-cccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCC
Confidence            35799999999987 53   21111     1133  5554 34    433 3689999998

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=95.88  E-value=0.0072  Score=35.68  Aligned_cols=25  Identities=28%  Similarity=0.672  Sum_probs=20.4

Q ss_pred             CCCC-cEEc--C---CCeEEccCCceeccCCC
Q psy8484          79 ECVF-GSCT--S---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        79 ~C~n-G~C~--~---p~~C~C~~G~~G~~~c~  104 (132)
                      +|.| |+|+  .   ...|.|++||+|.. |+
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~-Ce   43 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDR-CQ   43 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSS-SC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCc-CC
Confidence            7997 8998  2   35799999999987 54

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=95.87  E-value=0.004  Score=41.96  Aligned_cols=72  Identities=17%  Similarity=0.482  Sum_probs=22.0

Q ss_pred             CceEeCCCceeCCCceecccCC---CCCCcEEcC---CCeEEccCCceecc--CC-CCCccccCCCCCCCCEEcC---CC
Q psy8484          57 HVRICCEGYEDDHGSCRPVCER---ECVFGSCTS---PNQCTCSPGYVVIN--EA-SPNICEPHCAECVNGVCSA---PN  124 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~~C~~~C~~---~C~nG~C~~---p~~C~C~~G~~G~~--~c-~~~~C~~~C~~C~nG~C~~---p~  124 (132)
                      ..-....||.+.... +..|..   +|. ..|+.   ...|.|++||.|.+  .| ++++|... .+|. +.|++   .+
T Consensus        14 ~~~~~~~~~~~~~Cd-~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~-~~C~-~~C~n~~gsy   89 (107)
T 2w2n_E           14 DIPTTENLYFQGAMG-TNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP-DTCS-QLCVNLEGGY   89 (107)
T ss_dssp             ------CCCCSCCBS-CCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEETTTEEEC-----------------------
T ss_pred             cccccCCCcCCCCCc-CccCcCCCCCCC-CEeEeCCCCeEEECCCCccccCCCccccccccCCC-CCcC-CeeecCCCCE
Confidence            334566777765321 222321   232 26763   46899999999942  12 34455421 1454 67776   36


Q ss_pred             ceeCCCCC
Q psy8484         125 TCDCLDVL  132 (132)
Q Consensus       125 ~C~C~~G~  132 (132)
                      .|.|++||
T Consensus        90 ~C~C~~Gy   97 (107)
T 2w2n_E           90 KCQCEEGF   97 (107)
T ss_dssp             --------
T ss_pred             EEECCCCc
Confidence            89999987

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=95.83  E-value=0.019  Score=38.63  Aligned_cols=54  Identities=22%  Similarity=0.592  Sum_probs=35.8

Q ss_pred             cCCCCCC-cEEc---CCCeEEccCCceeccCCCCC----ccccCCC-CCCCCEEcC---CCceeCCCCC
Q psy8484          76 CERECVF-GSCT---SPNQCTCSPGYVVINEASPN----ICEPHCA-ECVNGVCSA---PNTCDCLDVL  132 (132)
Q Consensus        76 C~~~C~n-G~C~---~p~~C~C~~G~~G~~~c~~~----~C~~~C~-~C~nG~C~~---p~~C~C~~G~  132 (132)
                      |...|.| |+|+   ....|.|.+||.|.. |+..    .|... . +|.+ +|++   .+.|.|++||
T Consensus        18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~-C~~~~~~~~C~~~-~~~C~~-~C~n~~g~y~C~C~~G~   83 (114)
T 1aut_L           18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRF-CQREVSFLNCSLD-NGGCTH-YCLEEVGWRRCSCAPGY   83 (114)
T ss_dssp             SSSTTTTSEEECCCSSCCCEEECTTEESTT-SCEECCSSSSSSG-GGGCSS-EEEECSSSEEEECCTTE
T ss_pred             ccccCCCcCCCCCCCCCcEeeCCCCCcCCC-cCcCCcCCcCcCC-CCCCCC-EeECCCCCEEeECCCCe
Confidence            4445664 7885   779999999999987 5421    23211 0 2333 8876   3689999997

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=95.36  E-value=0.008  Score=36.58  Aligned_cols=26  Identities=31%  Similarity=0.760  Sum_probs=21.0

Q ss_pred             CCCCC-cEEcC--------CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS--------PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~--------p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.        ...|.|++||+|.. |+
T Consensus        12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~-Ce   46 (63)
T 1hae_A           12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR-CT   46 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEESTT-SC
T ss_pred             CcCCCCcEEecCCccCCCCCEEEECCCCCcCCc-cC
Confidence            58997 89973        34799999999987 53

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=95.10  E-value=0.013  Score=32.07  Aligned_cols=24  Identities=33%  Similarity=0.776  Sum_probs=19.4

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceecc
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+|.| |+|+.   ...|.|++||.|..
T Consensus         9 ~pC~ngg~C~~~~~~~~C~C~~G~~G~~   36 (39)
T 1edm_B            9 NPCLNGGSCKDDINSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred             CCCCCCCEeEcCCCceEeECCCCCcCCc
Confidence            57887 89974   34799999999986

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.08  E-value=0.0081  Score=35.73  Aligned_cols=33  Identities=24%  Similarity=0.668  Sum_probs=23.9

Q ss_pred             ceecccCCCCCC-cEEc--C---CCeEEccCCceeccCCC
Q psy8484          71 SCRPVCERECVF-GSCT--S---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        71 ~C~~~C~~~C~n-G~C~--~---p~~C~C~~G~~G~~~c~  104 (132)
                      .|.+.-..+|.| |+|+  .   ...|.|++||+|.. |+
T Consensus         5 ~C~~~~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~-Ce   43 (53)
T 1nql_B            5 ECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGER-CQ   43 (53)
T ss_dssp             ECCSTTCCEECTTCEEEEETTTTEEEEEECTTEESTT-SC
T ss_pred             ccCCCCCCCCCCCeEEeeecCCCCEEEecCCCCcCCC-CC
Confidence            344444568998 8997  2   24799999999987 54

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=95.07  E-value=0.0093  Score=38.35  Aligned_cols=50  Identities=24%  Similarity=0.614  Sum_probs=26.6

Q ss_pred             CCCcEEcC---CCeEEccCCceecc---CC-CCCccccCCCCCCCCEEcC---CCceeC--CCCC
Q psy8484          80 CVFGSCTS---PNQCTCSPGYVVIN---EA-SPNICEPHCAECVNGVCSA---PNTCDC--LDVL  132 (132)
Q Consensus        80 C~nG~C~~---p~~C~C~~G~~G~~---~c-~~~~C~~~C~~C~nG~C~~---p~~C~C--~~G~  132 (132)
                      |.+|+|+.   ...|.|++||.+..   .| +.+.|...  +|. +.|++   .+.|.|  .+||
T Consensus        13 C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~--~C~-~~C~n~~g~y~C~C~g~~G~   74 (87)
T 1z6c_A           13 CGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN--MCA-QLCVNYPGGYTCYCDGKKGF   74 (87)
T ss_dssp             BTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHS--CCS-SEECCCSSSCCEECCSSSCC
T ss_pred             CCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCC--CCC-CEEEccCCCEEEECCCCcCC
Confidence            43355542   35677777777421   12 33445433  555 67765   257777  3554

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=94.93  E-value=0.038  Score=48.07  Aligned_cols=45  Identities=22%  Similarity=0.601  Sum_probs=34.0

Q ss_pred             CCceE-eCCCceeCCCc-------------ee--cccC---CCCCC-cEEcCC-------CeEEccCCceec
Q psy8484          56 THVRI-CCEGYEDDHGS-------------CR--PVCE---RECVF-GSCTSP-------NQCTCSPGYVVI  100 (132)
Q Consensus        56 ~~~c~-C~~Gy~~~~~~-------------C~--~~C~---~~C~n-G~C~~p-------~~C~C~~G~~G~  100 (132)
                      .+.|. |.+||+|....             |+  ..|.   .+|.+ +.|+..       .+|.|.+||.|.
T Consensus        69 sY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd  140 (634)
T 1yo8_A           69 GFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD  140 (634)
T ss_dssp             SEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred             ceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence            45788 99999987644             63  4575   37885 899743       479999999994

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=94.92  E-value=0.0078  Score=38.58  Aligned_cols=46  Identities=30%  Similarity=0.691  Sum_probs=32.2

Q ss_pred             CCceEeCCCceeC---CCceec--ccC-C--CCCCcEEcC---CCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDD---HGSCRP--VCE-R--ECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~---~~~C~~--~C~-~--~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+.|.|.+||++.   +..|+.  .|. .  .|.+|+|++   ...|.|++||.+..
T Consensus        24 ~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A           24 DFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             EEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred             CEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence            3578999999953   345632  342 2  366789974   35799999999864

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=94.81  E-value=0.013  Score=46.10  Aligned_cols=51  Identities=27%  Similarity=0.606  Sum_probs=33.7

Q ss_pred             CC-CcEEcCCCeEEccCCceecc-CCCCC---------ccccC-CC-CCC-CCEEcCCCceeCCCCC
Q psy8484          80 CV-FGSCTSPNQCTCSPGYVVIN-EASPN---------ICEPH-CA-ECV-NGVCSAPNTCDCLDVL  132 (132)
Q Consensus        80 C~-nG~C~~p~~C~C~~G~~G~~-~c~~~---------~C~~~-C~-~C~-nG~C~~p~~C~C~~G~  132 (132)
                      |. ||.|.- +.|.|.+||.|.. +|+..         .|... =. .|. +|.|+- |+|.|..+|
T Consensus       198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~  262 (280)
T 2p26_A          198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSD  262 (280)
T ss_dssp             GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCS
T ss_pred             cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCC
Confidence            55 688874 8999999999987 23222         35311 00 354 688875 899997664

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=94.04  E-value=0.02  Score=34.67  Aligned_cols=25  Identities=20%  Similarity=0.610  Sum_probs=19.7

Q ss_pred             CCCC-cEEcC-------CCeEEccCCceeccCCC
Q psy8484          79 ECVF-GSCTS-------PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        79 ~C~n-G~C~~-------p~~C~C~~G~~G~~~c~  104 (132)
                      +|.| |+|+.       ...|.|++||.|.. |+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~-Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR-CE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSS-SC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCC-Cc
Confidence            6888 79972       12799999999987 44

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=93.89  E-value=0.028  Score=30.65  Aligned_cols=25  Identities=32%  Similarity=0.748  Sum_probs=18.6

Q ss_pred             CccccCCCCCCC-CEEcC-C--CceeCCCCC
Q psy8484         106 NICEPHCAECVN-GVCSA-P--NTCDCLDVL  132 (132)
Q Consensus       106 ~~C~~~C~~C~n-G~C~~-p--~~C~C~~G~  132 (132)
                      +.|...  +|.| |+|++ .  +.|.|++||
T Consensus         4 d~C~~~--pC~ngg~C~~~~~~~~C~C~~G~   32 (39)
T 1edm_B            4 DQCESN--PCLNGGSCKDDINSYECWCPFGF   32 (39)
T ss_dssp             CTTTTC--CCCTTCEEEEETTEEEEECCTTC
T ss_pred             ccCCCC--CCCCCCEeEcCCCceEeECCCCC
Confidence            445544  8887 79986 2  589999998

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=93.84  E-value=0.023  Score=39.54  Aligned_cols=45  Identities=29%  Similarity=0.659  Sum_probs=32.0

Q ss_pred             CceEeCCCceeC-CCcee--cccC---CCCCCcEEcC---CCeEEccCCceecc
Q psy8484          57 HVRICCEGYEDD-HGSCR--PVCE---RECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        57 ~~c~C~~Gy~~~-~~~C~--~~C~---~~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      +.|.|.+||++. +..|+  ..|.   .+|.||+|++   ..+|.|++||.|..
T Consensus        88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             CCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred             CcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCC
Confidence            456899999752 34553  2353   3588899974   35799999999975

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=93.80  E-value=0.018  Score=47.87  Aligned_cols=42  Identities=24%  Similarity=0.606  Sum_probs=0.0

Q ss_pred             CCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcC-CCceeC
Q psy8484          79 ECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSA-PNTCDC  128 (132)
Q Consensus        79 ~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~-p~~C~C  128 (132)
                      +|.| |+|....+|.|.+||.|.. |+..       .|.+ |+|++ .|+|.=
T Consensus       372 ~C~ngg~C~~~~~C~C~~G~~G~~-Ce~c-------~C~~~g~C~~~~Gqc~~  416 (426)
T 3zyj_B          372 HCQNGGTCHNNVRCLCPAAYTGIL-CEKL-------RCEEAGSCGSDSGQGAP  416 (426)
T ss_dssp             -----------------------------------------------------
T ss_pred             cCCCCCCcCCCCCCcCCCCCcCCC-CcCC-------CCCCCCcccCCCCccCC
Confidence            5665 6787656888999999976 4321       4553 67765 466653

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=93.63  E-value=0.048  Score=39.07  Aligned_cols=50  Identities=22%  Similarity=0.654  Sum_probs=30.9

Q ss_pred             cEEc-CCCeE-EccCCceecc--CCCCCcccc--------CCC--CCCC-C------EEcC-CCceeCCCCC
Q psy8484          83 GSCT-SPNQC-TCSPGYVVIN--EASPNICEP--------HCA--ECVN-G------VCSA-PNTCDCLDVL  132 (132)
Q Consensus        83 G~C~-~p~~C-~C~~G~~G~~--~c~~~~C~~--------~C~--~C~n-G------~C~~-p~~C~C~~G~  132 (132)
                      +.|. ..++| .|.++|.|..  .|.+...+.        .|.  .|.+ |      .|.. .++|.|.+||
T Consensus        68 ~~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~  139 (162)
T 1klo_A           68 GNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHV  139 (162)
T ss_dssp             CCBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTE
T ss_pred             CcccCCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCC
Confidence            4675 36789 4888888876  122332221        222  4553 4      7876 5899999886

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=93.53  E-value=0.03  Score=33.64  Aligned_cols=24  Identities=33%  Similarity=0.645  Sum_probs=17.4

Q ss_pred             ccccCCCCCCC-CEEc-----C---CCceeCCCCC
Q psy8484         107 ICEPHCAECVN-GVCS-----A---PNTCDCLDVL  132 (132)
Q Consensus       107 ~C~~~C~~C~n-G~C~-----~---p~~C~C~~G~  132 (132)
                      +|...  +|+| |+|.     +   .+.|.|++||
T Consensus        10 eC~s~--pC~NgGtC~~~~~~d~~~~y~C~C~~g~   42 (55)
T 3u7u_G           10 EKEKT--FCVNGGECFMVKDLSNPSRYLCKCPNEF   42 (55)
T ss_dssp             STTTT--TSCTTCEEEEECCC--CCCEEEEECTTE
T ss_pred             CCcCC--CCCCCCCcCCCCccCCCCCEeEeCCCCC
Confidence            44444  8998 6993     3   3689999997

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=93.52  E-value=0.013  Score=51.56  Aligned_cols=37  Identities=19%  Similarity=0.440  Sum_probs=28.3

Q ss_pred             EEccCCceeccCCCCCccccCCC-CCC-CCEEcCCCceeCCCCC
Q psy8484          91 CTCSPGYVVINEASPNICEPHCA-ECV-NGVCSAPNTCDCLDVL  132 (132)
Q Consensus        91 C~C~~G~~G~~~c~~~~C~~~C~-~C~-nG~C~~p~~C~C~~G~  132 (132)
                      ..|.+||.|.+ |..   ++.|. .|. ||.|++ |+|.|.+||
T Consensus       520 ~~C~~gw~g~d-c~i---~~~Cp~~C~ghG~C~~-G~C~Cd~G~  558 (725)
T 2e26_A          520 FDKQQTWAIDN-VYI---GDGCLDMCSGHGRCVQ-GSCVCDEQW  558 (725)
T ss_dssp             CCTTCCEEEEE-EEE---ESCSSGGGGGSEEEET-TEEEECTTE
T ss_pred             CccCCCccccc-ccc---cCCCCcccCCCcEECC-CCEeeCCCc
Confidence            47899999998 541   23444 555 899987 999999997

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=93.09  E-value=0.1  Score=40.36  Aligned_cols=45  Identities=24%  Similarity=0.644  Sum_probs=32.4

Q ss_pred             CCceEeCCCceeCCCc-eecccC----CCCCCcEEcC---CCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDDHGS-CRPVCE----RECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~-C~~~C~----~~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+.|.|.+||.|..+. =+..|.    .+|.| .|++   ...|.|.+||.|..
T Consensus        25 ~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~   77 (317)
T 3h5c_B           25 GYTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGE   77 (317)
T ss_dssp             SCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCT
T ss_pred             CeEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccccc
Confidence            4679999999987432 123353    46777 8874   46899999999864

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=92.99  E-value=0.062  Score=31.69  Aligned_cols=33  Identities=21%  Similarity=0.652  Sum_probs=22.7

Q ss_pred             ceecccCCCCCCcEEc--C---CCeEEccCCceeccCCC
Q psy8484          71 SCRPVCERECVFGSCT--S---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        71 ~C~~~C~~~C~nG~C~--~---p~~C~C~~G~~G~~~c~  104 (132)
                      .|.+....-|.||+|.  .   ...|.|++||+|.. |+
T Consensus        11 ~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~G~R-Ce   48 (50)
T 2rnl_A           11 PCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGER-CG   48 (50)
T ss_dssp             TTTTTGGGTCSSSEEEEETTTTEEEEECCSSCCSSS-CC
T ss_pred             ccCchhhCcCCCCEEEEecCCCCeeEECCCCccccc-cc
Confidence            4443334568899996  1   13699999999986 54

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=92.83  E-value=0.042  Score=36.78  Aligned_cols=45  Identities=20%  Similarity=0.618  Sum_probs=13.4

Q ss_pred             CCceEeCCCceeC-CCcee--cccC--CCCCCcEEcC---CCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDD-HGSCR--PVCE--RECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~-~~~C~--~~C~--~~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+.|.|.+||++. +..|+  ..|.  .+|. +.|++   ...|.|++||.|..
T Consensus        49 ~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           49 GYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQLDP  101 (107)
T ss_dssp             SCEEECCTTCEEETTTEEEC----------------------------------
T ss_pred             CeEEECCCCccccCCCccccccccCCCCCcC-CeeecCCCCEEEECCCCceECC
Confidence            5689999999984 34553  2343  3454 67763   46799999999864

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=92.69  E-value=0.055  Score=40.33  Aligned_cols=41  Identities=29%  Similarity=0.838  Sum_probs=16.7

Q ss_pred             CCceEeCCCceeCCCcee----cccCC---CCCCcEEcC---CCeEEccCCcee
Q psy8484          56 THVRICCEGYEDDHGSCR----PVCER---ECVFGSCTS---PNQCTCSPGYVV   99 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~----~~C~~---~C~nG~C~~---p~~C~C~~G~~G   99 (132)
                      .+.|.|.+||+|..  |+    ..|..   +|.+ .|+.   ...|.|.+||.+
T Consensus        62 ~y~C~C~~Gf~G~~--Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l  112 (195)
T 1nfu_B           62 EYTCTCLEGFEGKN--CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTL  112 (195)
T ss_dssp             ---------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEE
T ss_pred             CeeEeCCCCceecc--ccccccccccCCCCCCCC-EeECCCCCeEEECCCCcee
Confidence            46799999999863  42    22542   4666 8863   357999999993

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=92.37  E-value=0.077  Score=32.44  Aligned_cols=24  Identities=29%  Similarity=0.821  Sum_probs=19.4

Q ss_pred             CCCCC---cEEcC---CCeEEccCCce-ecc
Q psy8484          78 RECVF---GSCTS---PNQCTCSPGYV-VIN  101 (132)
Q Consensus        78 ~~C~n---G~C~~---p~~C~C~~G~~-G~~  101 (132)
                      .||.|   |+|+.   ...|.|++||. |.+
T Consensus        17 nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~   47 (61)
T 2k2s_B           17 NPCGPEAAGTCKETNSGYICRCNQGYRISLD   47 (61)
T ss_dssp             CSSCSSSCCEEEECSSEEEEECCTTEEEEEC
T ss_pred             CCCcCCCccccccCCCceEeECCCCCccCCC
Confidence            57986   49974   34799999999 987

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=92.33  E-value=0.039  Score=31.71  Aligned_cols=19  Identities=32%  Similarity=0.698  Sum_probs=16.0

Q ss_pred             CCCCCEEcC-----CCceeCCCCC
Q psy8484         114 ECVNGVCSA-----PNTCDCLDVL  132 (132)
Q Consensus       114 ~C~nG~C~~-----p~~C~C~~G~  132 (132)
                      +|.||+|..     ...|.|++||
T Consensus        13 pC~nG~C~~~~~~~~~~C~C~~Gy   36 (46)
T 1k36_A           13 YCLHGQCIYLVDMSQNYCRCEVGY   36 (46)
T ss_dssp             SCSSEEEEEETTTTEEEEEECTTC
T ss_pred             CCCCCEeeccCCCCCEEEECCCCC
Confidence            899999984     2589999998

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=92.32  E-value=0.051  Score=45.19  Aligned_cols=70  Identities=19%  Similarity=0.324  Sum_probs=20.7

Q ss_pred             CceEeCCCceeCCC-ceeccc-CCCCCCcEE-----cCCCeEE-ccCCceeccCCCCCccccCCCCCCC-CEEcCCCcee
Q psy8484          57 HVRICCEGYEDDHG-SCRPVC-ERECVFGSC-----TSPNQCT-CSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCD  127 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~-~C~~~C-~~~C~nG~C-----~~p~~C~-C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~  127 (132)
                      .+|.|..||.|.++ .|.+.. ..++.+|.+     ..++.|. |+-++.|.. |+...     .+|.| |+|.+...|.
T Consensus       313 ~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~-CD~~t-----~~C~ngg~C~~~~~C~  386 (426)
T 3zyj_B          313 LTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNV-CDNEL-----LHCQNGGTCHNNVRCL  386 (426)
T ss_dssp             EEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------------------
T ss_pred             ceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCc-cccCc-----ccCCCCCCcCCCCCCc
Confidence            36778888888753 344432 234555543     1345563 443344443 44321     27886 6898877999


Q ss_pred             CCCCC
Q psy8484         128 CLDVL  132 (132)
Q Consensus       128 C~~G~  132 (132)
                      |++||
T Consensus       387 C~~G~  391 (426)
T 3zyj_B          387 CPAAY  391 (426)
T ss_dssp             -----
T ss_pred             CCCCC
Confidence            99997

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=92.13  E-value=0.18  Score=35.32  Aligned_cols=44  Identities=27%  Similarity=0.610  Sum_probs=28.3

Q ss_pred             CCceEeCCCceeCCCceecccCC---CCCCcEE-c---CCCeEEccCCceec
Q psy8484          56 THVRICCEGYEDDHGSCRPVCER---ECVFGSC-T---SPNQCTCSPGYVVI  100 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~~C~~---~C~nG~C-~---~p~~C~C~~G~~G~  100 (132)
                      .+.|.|.+||+|....=...|..   +|.+ .| +   ....|.|++||.+.
T Consensus        68 ~y~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~  118 (146)
T 1x7a_L           68 SYECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLA  118 (146)
T ss_dssp             CEEEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEEC
T ss_pred             CEEEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeC
Confidence            46799999999864211222331   3444 67 4   24679999999953

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=92.11  E-value=0.092  Score=30.96  Aligned_cols=27  Identities=30%  Similarity=0.763  Sum_probs=20.8

Q ss_pred             CCCCCCcEEcC-----CCeEEccCCceeccCCC
Q psy8484          77 ERECVFGSCTS-----PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        77 ~~~C~nG~C~~-----p~~C~C~~G~~G~~~c~  104 (132)
                      ..-|.||.|.-     ...|+|.+||+|.. |+
T Consensus        13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R-Ce   44 (50)
T 3e50_C           13 TQFCFHGTCRFLVQEDKPACVCHSGYVGAR-CE   44 (50)
T ss_pred             cCcccCCEEeeccCCCCeEEECCCCCcccC-CC
Confidence            34688899962     35799999999987 54

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=91.59  E-value=0.14  Score=40.22  Aligned_cols=43  Identities=28%  Similarity=0.708  Sum_probs=32.7

Q ss_pred             CceEeCCCceeCCCcee-c---------ccCC-----CCC-CcEEcCCCeEEccCCceec
Q psy8484          57 HVRICCEGYEDDHGSCR-P---------VCER-----ECV-FGSCTSPNQCTCSPGYVVI  100 (132)
Q Consensus        57 ~~c~C~~Gy~~~~~~C~-~---------~C~~-----~C~-nG~C~~p~~C~C~~G~~G~  100 (132)
                      ++|.|.+||.|...+|. .         .|..     .|. +|.|+- ++|.|..+|.|.
T Consensus       207 G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~~  265 (280)
T 2p26_A          207 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPG  265 (280)
T ss_dssp             TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSSTT
T ss_pred             CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCCC
Confidence            56899999999977773 1         4642     376 599986 899998888654

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=91.35  E-value=0.26  Score=33.16  Aligned_cols=59  Identities=17%  Similarity=0.437  Sum_probs=38.8

Q ss_pred             cCCcceeEEEEEeeeeeeecCCCceEeCCCceeCCCceecc----cCC---CCC-CcEEcC--C------CeEEccCCce
Q psy8484          35 HCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPV----CER---ECV-FGSCTS--P------NQCTCSPGYV   98 (132)
Q Consensus        35 ~C~~~r~~~~~~~~~~~~~~~~~~c~C~~Gy~~~~~~C~~~----C~~---~C~-nG~C~~--p------~~C~C~~G~~   98 (132)
                      .|+....++++..       .+..|.|.+||++.+..|++.    |..   +|. |+.|..  |      -.|.|.+|+.
T Consensus        11 ~C~~NA~C~r~~~-------g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           11 QCPQNSGCFRHLD-------EREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCTTEEEECCTT-------SCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCCeEEcCC-------CCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            5666666654322       255799999999998889553    542   465 677753  3      2588888875


Q ss_pred             ec
Q psy8484          99 VI  100 (132)
Q Consensus        99 G~  100 (132)
                      -+
T Consensus        84 ~~   85 (99)
T 1ob1_C           84 YP   85 (99)
T ss_dssp             CE
T ss_pred             cc
Confidence            43

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=91.25  E-value=0.13  Score=35.39  Aligned_cols=41  Identities=29%  Similarity=0.838  Sum_probs=16.2

Q ss_pred             CCceEeCCCceeCCCcee----cccCC---CCCCcEEcC---CCeEEccCCcee
Q psy8484          56 THVRICCEGYEDDHGSCR----PVCER---ECVFGSCTS---PNQCTCSPGYVV   99 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~----~~C~~---~C~nG~C~~---p~~C~C~~G~~G   99 (132)
                      .+.|.|.+||+|..  |+    ..|..   +|.+ .|+.   ...|.|.+||.+
T Consensus        62 ~y~C~C~~G~~G~~--C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l  112 (134)
T 2vh0_B           62 EYTCTCLEGFEGKN--CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTL  112 (134)
T ss_dssp             ---------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEE
T ss_pred             CEEeeCCCCccCCc--cccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEE
Confidence            46799999999863  42    12532   4555 7864   347999999994

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=90.66  E-value=0.07  Score=38.19  Aligned_cols=15  Identities=27%  Similarity=0.713  Sum_probs=9.1

Q ss_pred             CEEcC-CCcee-CCCCC
Q psy8484         118 GVCSA-PNTCD-CLDVL  132 (132)
Q Consensus       118 G~C~~-p~~C~-C~~G~  132 (132)
                      +.|.. .++|. |.++|
T Consensus        68 ~~C~~~tG~C~~C~~g~   84 (162)
T 1klo_A           68 GNCNRLTGECLKCIYNT   84 (162)
T ss_dssp             CCBCTTTCCBCCBCTTE
T ss_pred             CcccCCCCcccCCCCCC
Confidence            36754 47784 77664

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=90.56  E-value=0.23  Score=31.60  Aligned_cols=44  Identities=27%  Similarity=0.609  Sum_probs=28.1

Q ss_pred             CCceEeCCCceeC--CCceec--ccC-CCCCCcEEcC---CCeEEccCCceecc
Q psy8484          56 THVRICCEGYEDD--HGSCRP--VCE-RECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        56 ~~~c~C~~Gy~~~--~~~C~~--~C~-~~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+.|.|.+||++.  +..|+.  .|. .+|. ++|+.   ...|.|+ |+.|..
T Consensus        24 ~y~C~C~~G~~~~~~g~~C~dideC~~~~C~-~~C~n~~g~y~C~C~-g~~G~~   75 (87)
T 1z6c_A           24 DFECECPEGYRYNLKSKSCEDIDECSENMCA-QLCVNYPGGYTCYCD-GKKGFK   75 (87)
T ss_dssp             BCCCSSSTTCEEETTTTEEECCCHHHHSCCS-SEECCCSSSCCEECC-SSSCCB
T ss_pred             CEEEECCCCceECCCCCcCCCcCeeCCCCCC-CEEEccCCCEEEECC-CCcCCc
Confidence            4679999999964  335532  232 3565 67864   4689997 666654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=90.54  E-value=0.13  Score=41.17  Aligned_cols=12  Identities=25%  Similarity=0.861  Sum_probs=6.6

Q ss_pred             CeEEccCCceec
Q psy8484          89 NQCTCSPGYVVI  100 (132)
Q Consensus        89 ~~C~C~~G~~G~  100 (132)
                      ..|.|.+||.+.
T Consensus        60 ~~C~C~~g~~~~   71 (400)
T 3p5b_L           60 YKCQCEEGFQLD   71 (400)
T ss_dssp             CBCCCCTTCCCC
T ss_pred             eeeecccccccc
Confidence            355566666554

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=90.11  E-value=0.1  Score=42.93  Aligned_cols=27  Identities=33%  Similarity=0.848  Sum_probs=23.4

Q ss_pred             cccCCCCC-CcEEcCCCeEEccCCceecc
Q psy8484          74 PVCERECV-FGSCTSPNQCTCSPGYVVIN  101 (132)
Q Consensus        74 ~~C~~~C~-nG~C~~p~~C~C~~G~~G~~  101 (132)
                      +.|...|. ||.|+. ++|.|++||.|.+
T Consensus       192 ~~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d  219 (387)
T 2ddu_A          192 EPCPSYCSGHGDCIS-GVCFCDLGYTAAQ  219 (387)
T ss_dssp             SCCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred             ccCccccCCCceecC-CeEEecCCcccCC
Confidence            45777888 899988 9999999999974

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=90.05  E-value=0.32  Score=32.99  Aligned_cols=52  Identities=17%  Similarity=0.533  Sum_probs=26.6

Q ss_pred             CCC-CcEEcC----CCeEEccCCceecc-CCCCCccccCCC----CCC-CCEEcCC--C--ceeCCCCC
Q psy8484          79 ECV-FGSCTS----PNQCTCSPGYVVIN-EASPNICEPHCA----ECV-NGVCSAP--N--TCDCLDVL  132 (132)
Q Consensus        79 ~C~-nG~C~~----p~~C~C~~G~~G~~-~c~~~~C~~~C~----~C~-nG~C~~p--~--~C~C~~G~  132 (132)
                      .|. |+.|..    ..+|+|..||+|.. .|-+.  .+.|.    +|. |..|...  +  +|.|.++|
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~--Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~   83 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA--SITCEENNGGCAPEAECTMDDKKEVECKCTKEG   83 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC--CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC--CcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence            344 666653    23577777777754 11111  23342    444 4555532  2  57776653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=89.55  E-value=0.11  Score=41.25  Aligned_cols=43  Identities=33%  Similarity=0.720  Sum_probs=11.4

Q ss_pred             CceEeCCCceeC--CCcee--cccC--CCCCCcEEcC---CCeEEccCCceec
Q psy8484          57 HVRICCEGYEDD--HGSCR--PVCE--RECVFGSCTS---PNQCTCSPGYVVI  100 (132)
Q Consensus        57 ~~c~C~~Gy~~~--~~~C~--~~C~--~~C~nG~C~~---p~~C~C~~G~~G~  100 (132)
                      +.|.|.+||+..  +..|+  ..|.  .+|.++ |++   ...|.|.+||...
T Consensus        24 ~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~   75 (386)
T 3v65_B           24 VQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELR   75 (386)
T ss_dssp             ----------------------------CCTTE-EC-----CCEECCTTEEEC
T ss_pred             cEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEc
Confidence            457777777622  22342  2232  245544 553   3467777777743

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=89.43  E-value=0.078  Score=37.41  Aligned_cols=44  Identities=25%  Similarity=0.600  Sum_probs=28.7

Q ss_pred             ceEeCC--CceeCC--Ccee--cccC---CCCCCcEEcC---CCeEEccCCceecc
Q psy8484          58 VRICCE--GYEDDH--GSCR--PVCE---RECVFGSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        58 ~c~C~~--Gy~~~~--~~C~--~~C~---~~C~nG~C~~---p~~C~C~~G~~G~~  101 (132)
                      .|.|.+  ||++..  ..|+  ..|.   .+|.||+|++   ..+|.|++||.|..
T Consensus       101 ~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~  156 (162)
T 1uzk_A          101 KILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE  156 (162)
T ss_dssp             HHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCT
T ss_pred             eeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCC
Confidence            345555  777652  2332  2353   3588899974   45899999999975

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=89.00  E-value=0.099  Score=31.54  Aligned_cols=19  Identities=37%  Similarity=0.768  Sum_probs=15.6

Q ss_pred             CCCC-CEEcC--------CCceeCCCCC
Q psy8484         114 ECVN-GVCSA--------PNTCDCLDVL  132 (132)
Q Consensus       114 ~C~n-G~C~~--------p~~C~C~~G~  132 (132)
                      +|.| |+|++        .+.|.|++||
T Consensus        13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf   40 (63)
T 1hae_A           13 FCVNGGECFMVKDLSNPSRYLCKCQPGF   40 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTE
T ss_pred             cCCCCcEEecCCccCCCCCEEEECCCCC
Confidence            8987 79984        3589999997

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=88.94  E-value=0.19  Score=34.45  Aligned_cols=26  Identities=23%  Similarity=0.595  Sum_probs=19.5

Q ss_pred             CCCC-cEEcCC-----C-eEEccCCceeccCCCC
Q psy8484          79 ECVF-GSCTSP-----N-QCTCSPGYVVINEASP  105 (132)
Q Consensus        79 ~C~n-G~C~~p-----~-~C~C~~G~~G~~~c~~  105 (132)
                      +|+| |+|+..     . .|.|++||+|.. |++
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~-Ce~   34 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH-CEI   34 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTT-SCE
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCcc-ccc
Confidence            5887 789642     2 799999999986 553

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=88.69  E-value=0.23  Score=28.96  Aligned_cols=19  Identities=42%  Similarity=0.980  Sum_probs=15.4

Q ss_pred             CCCC-CEEc--C---CCceeCCCCC
Q psy8484         114 ECVN-GVCS--A---PNTCDCLDVL  132 (132)
Q Consensus       114 ~C~n-G~C~--~---p~~C~C~~G~  132 (132)
                      +|.| |+|+  +   .+.|.|++||
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~   37 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGY   37 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCC
Confidence            7887 7998  3   3689999997

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=88.49  E-value=0.2  Score=35.44  Aligned_cols=26  Identities=27%  Similarity=0.680  Sum_probs=20.6

Q ss_pred             CCCC-cEEcCC----C--eEEccCCceeccCCCC
Q psy8484          79 ECVF-GSCTSP----N--QCTCSPGYVVINEASP  105 (132)
Q Consensus        79 ~C~n-G~C~~p----~--~C~C~~G~~G~~~c~~  105 (132)
                      +|+| |+|+..    +  .|.|++||.|.. |++
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~-Cei   46 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH-CEI   46 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTT-SCE
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCc-eec
Confidence            6888 899754    2  799999999987 543

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=88.40  E-value=0.3  Score=31.50  Aligned_cols=27  Identities=30%  Similarity=0.816  Sum_probs=20.8

Q ss_pred             CCCCCCcEEc-----CCCeEEccCCceeccCCC
Q psy8484          77 ERECVFGSCT-----SPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        77 ~~~C~nG~C~-----~p~~C~C~~G~~G~~~c~  104 (132)
                      ...|.||.|+     ....|.|.+||+|.. |+
T Consensus        45 ~~yClnG~C~~i~~~~~~~C~C~~GYtG~R-CE   76 (79)
T 1xdt_R           45 KDFCIHGECKYVKELRAPSCICHPGYHGER-CH   76 (79)
T ss_dssp             TTCCSSEEECCBGGGTBCCEEECTTEESTT-CC
T ss_pred             cCcCCCCEeeeecCCCCeEEEcCCCccccc-cc
Confidence            4578899994     124699999999986 54

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=87.65  E-value=0.16  Score=30.98  Aligned_cols=25  Identities=24%  Similarity=0.701  Sum_probs=18.9

Q ss_pred             CccccCCCCCCC---CEEcCC---CceeCCCCC
Q psy8484         106 NICEPHCAECVN---GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       106 ~~C~~~C~~C~n---G~C~~p---~~C~C~~G~  132 (132)
                      +.|.+.  +|.|   |+|++.   +.|.|++||
T Consensus        12 d~C~sn--PC~nga~gtC~~~~g~y~C~C~~Gy   42 (61)
T 2k2s_B           12 AACSSN--PCGPEAAGTCKETNSGYICRCNQGY   42 (61)
T ss_dssp             CHHHHC--SSCSSSCCEEEECSSEEEEECCTTE
T ss_pred             CcCcCC--CCcCCCccccccCCCceEeECCCCC
Confidence            456554  8987   499863   699999997

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=87.42  E-value=0.27  Score=28.76  Aligned_cols=26  Identities=27%  Similarity=0.819  Sum_probs=19.7

Q ss_pred             CCCCCcEEc-----CCCeEEccCCceeccCCC
Q psy8484          78 RECVFGSCT-----SPNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~nG~C~-----~p~~C~C~~G~~G~~~c~  104 (132)
                      .-|.||.|.     ....|+|++||+|.. |+
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~R-Ce   44 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGYIGAR-CE   44 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETTT-TC
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCcccCC-CC
Confidence            468889995     123699999999986 54

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=87.05  E-value=1.2  Score=29.88  Aligned_cols=50  Identities=24%  Similarity=0.683  Sum_probs=33.0

Q ss_pred             CCC-CcEEcC----CCeEEccCCceeccCCCCCcccc----CCC----CCC-CCEEcC--C------CceeCCCCC
Q psy8484          79 ECV-FGSCTS----PNQCTCSPGYVVINEASPNICEP----HCA----ECV-NGVCSA--P------NTCDCLDVL  132 (132)
Q Consensus        79 ~C~-nG~C~~----p~~C~C~~G~~G~~~c~~~~C~~----~C~----~C~-nG~C~~--p------~~C~C~~G~  132 (132)
                      .|. |+.|..    ...|+|.+||.|..    ..|.+    .|.    +|. |..|..  +      -+|.|.+|+
T Consensus        11 ~C~~NA~C~r~~~g~e~C~C~~gy~gdg----~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C           11 QCPQNSGCFRHLDEREECKCLLNYKQEG----DKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             CCCTTEEEECCTTSCCEEEECTTEEEET----TEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred             CCCCCCCeEEcCCCCEEEEecCCeecCC----CeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence            455 788864    45799999999965    22332    343    465 677774  3      279998875

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=86.57  E-value=0.019  Score=44.96  Aligned_cols=14  Identities=14%  Similarity=-0.071  Sum_probs=11.0

Q ss_pred             CCceEeCCCceeCC
Q psy8484          56 THVRICCEGYEDDH   69 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~   69 (132)
                      .+.|.|.+||+|..
T Consensus        52 ~y~C~Cp~Gf~G~~   65 (267)
T 4fbr_A           52 TYNGEGPIGFRGTL   65 (267)
T ss_dssp             EETTSCCEEEEEEE
T ss_pred             CeEEeCCCCccccc
Confidence            46788999998863

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=85.96  E-value=0.56  Score=32.45  Aligned_cols=44  Identities=18%  Similarity=0.433  Sum_probs=27.8

Q ss_pred             CCceEeCCCceeCCCce-ecccC-CCCCC-c---EEcC----CCeEEccCCcee
Q psy8484          56 THVRICCEGYEDDHGSC-RPVCE-RECVF-G---SCTS----PNQCTCSPGYVV   99 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C-~~~C~-~~C~n-G---~C~~----p~~C~C~~G~~G   99 (132)
                      .+.|.|.+||+|....= +..|. .+|.| +   .|+.    ...|.|++||.+
T Consensus        67 ~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l  120 (142)
T 2c4f_L           67 SYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL  120 (142)
T ss_dssp             EEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEE
T ss_pred             CEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceE
Confidence            35799999999874321 12221 12334 3   7863    457999999994

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=85.75  E-value=0.012  Score=46.09  Aligned_cols=23  Identities=9%  Similarity=-0.023  Sum_probs=13.9

Q ss_pred             CCCC-cEEcC---CCeEEccCCceecc
Q psy8484          79 ECVF-GSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        79 ~C~n-G~C~~---p~~C~C~~G~~G~~  101 (132)
                      +|.| |+|+.   ..+|+|++||+|..
T Consensus       106 pC~ngG~C~~~~~sy~C~C~~Gf~G~~  132 (267)
T 4fbr_A          106 KSNDGGKTLTGTTTYNGEGPIGFKSEV  132 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEEEE
T ss_pred             CCCCCCEEecCCccEEeeCCCCccccC
Confidence            5665 66652   34567777777654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=85.32  E-value=0.24  Score=41.34  Aligned_cols=48  Identities=25%  Similarity=0.621  Sum_probs=12.0

Q ss_pred             CCceEeCCCceeCCC-ceec----------ccC-CCCCC-cE----EcC-CCeEEccCCceeccCCC
Q psy8484          56 THVRICCEGYEDDHG-SCRP----------VCE-RECVF-GS----CTS-PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~-~C~~----------~C~-~~C~n-G~----C~~-p~~C~C~~G~~G~~~c~  104 (132)
                      .+.|.|.+||.|... .|.+          .|. -+|.+ |.    |.. .++|.|.+||.|.. |+
T Consensus       459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~-Ce  524 (525)
T 4aqs_A          459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ-CN  524 (525)
T ss_dssp             TCCBCBCTTCCSTTTCC--------------------------------------------------
T ss_pred             CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCC-CC
Confidence            456899999998753 2321          132 13443 43    432 35799999999986 54

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=84.56  E-value=0.66  Score=40.03  Aligned_cols=43  Identities=19%  Similarity=0.662  Sum_probs=26.4

Q ss_pred             CCeEEccCCceecc--CC-CCCccccCCCCCCCCEEcC---CCceeCCCCC
Q psy8484          88 PNQCTCSPGYVVIN--EA-SPNICEPHCAECVNGVCSA---PNTCDCLDVL  132 (132)
Q Consensus        88 p~~C~C~~G~~G~~--~c-~~~~C~~~C~~C~nG~C~~---p~~C~C~~G~  132 (132)
                      ...|.|.+||.+.+  .| ++++|... .+|. ..|++   .+.|.|.+||
T Consensus       314 ~~~C~C~~G~~~~~~~~C~dideC~~~-~~C~-~~C~n~~g~y~C~C~~G~  362 (699)
T 1n7d_A          314 GYECLCPDGFQLVAQRRCEDIDECQDP-DTCS-QLCVNLEGGYKCQCEEGF  362 (699)
T ss_dssp             CCCCCCCSSSCCCSSSCCCCCCCCSSS-SSCT-TTCCBCSSCBCCCCCSSC
T ss_pred             CcEEeCCCCeEcCCCCcccCccccCCC-Cccc-cccccCCCCeeeeeeccc
Confidence            46799999999522  23 44555421 1343 24554   3689999997

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=81.90  E-value=1.5  Score=29.62  Aligned_cols=59  Identities=25%  Similarity=0.580  Sum_probs=38.7

Q ss_pred             ecCCcceeEEEEEeeeeeeecCCCceEeCCCceeCCCceecc---cC---CCCC-CcEEcCC--C--eEEccCCcee
Q psy8484          34 YHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPV---CE---RECV-FGSCTSP--N--QCTCSPGYVV   99 (132)
Q Consensus        34 ~~C~~~r~~~~~~~~~~~~~~~~~~c~C~~Gy~~~~~~C~~~---C~---~~C~-nG~C~~p--~--~C~C~~G~~G   99 (132)
                      ..|+....++++..-       +..|.|..||++.+..|++.   |.   .+|. |+.|...  +  .|.|..||.-
T Consensus        16 t~Cp~NA~C~r~~~G-------~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~   85 (105)
T 1n1i_A           16 TNVPENAACYRYLDG-------TEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE   85 (105)
T ss_dssp             SCCCTTEEEEECTTS-------CEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred             CCCCCCCCeEECCCC-------CEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence            357777777765432       33689999999998889765   21   1343 4566533  2  4888888643

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=81.61  E-value=0.86  Score=36.31  Aligned_cols=43  Identities=19%  Similarity=0.675  Sum_probs=25.1

Q ss_pred             CCeEEccCCceecc--CC-CCCccccCCCCCCCCEEcC---CCceeCCCCC
Q psy8484          88 PNQCTCSPGYVVIN--EA-SPNICEPHCAECVNGVCSA---PNTCDCLDVL  132 (132)
Q Consensus        88 p~~C~C~~G~~G~~--~c-~~~~C~~~C~~C~nG~C~~---p~~C~C~~G~  132 (132)
                      ...|.|++||.+.+  .| +.++|... .+|.+ .|++   .+.|.|.+||
T Consensus        20 ~y~C~C~~G~~~~~~~~C~dideC~~~-~~C~~-~C~n~~g~~~C~C~~g~   68 (400)
T 3p5b_L           20 GYECLCPDGFQLVAQRRCEDIDECQDP-DTCSQ-LCVNLEGGYKCQCEEGF   68 (400)
T ss_dssp             SEEEECCTTEEECSSSCEEECCCCSTT-SSCSS-CCBCCSSSCBCCCCTTC
T ss_pred             CeEEECCCCCCcCCCCcccCchhhhcc-CCCCC-ccCCCccceeeeccccc
Confidence            46788888888422  12 33445311 14544 5665   3689998887

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=81.49  E-value=0.41  Score=33.20  Aligned_cols=26  Identities=27%  Similarity=0.732  Sum_probs=20.3

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.+ |+|+.   ...|.|++||.|.. |+
T Consensus       125 ~~C~~~g~C~~~~~~~~c~C~~g~~G~~-Ce  154 (162)
T 1g1s_A          125 MSCSKQGECLETIGNYTCSCYPGFYGPE-CE  154 (162)
T ss_dssp             TGGGGSEEEEECSSSEEEEECTTEESTT-SC
T ss_pred             CCCCCCCEEecCCCCceEeCCCCCcCcc-cc
Confidence            46875 89974   45899999999986 54

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=81.28  E-value=0.64  Score=40.01  Aligned_cols=28  Identities=29%  Similarity=0.736  Sum_probs=22.3

Q ss_pred             CCCCCC-cEEcC----CCeEEcc-CCceeccCCCC
Q psy8484          77 ERECVF-GSCTS----PNQCTCS-PGYVVINEASP  105 (132)
Q Consensus        77 ~~~C~n-G~C~~----p~~C~C~-~G~~G~~~c~~  105 (132)
                      ..+|+| |+|+.    ...|.|. +||.|.+ |+.
T Consensus         6 s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~-Ce~   39 (587)
T 3nt1_A            6 SNPCQNRGECMSTGFDQYKCDCTRTGFYGEN-CTT   39 (587)
T ss_dssp             TCCCCTTCEEEEEETTEEEEECTTSSEETTT-TCE
T ss_pred             CCCCCCCCEeeCCCCCCeEEecCCCCccCCC-CCC
Confidence            368998 89983    3579999 9999997 653

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=80.25  E-value=0.95  Score=39.93  Aligned_cols=10  Identities=30%  Similarity=1.169  Sum_probs=5.7

Q ss_pred             eEEccCCcee
Q psy8484          90 QCTCSPGYVV   99 (132)
Q Consensus        90 ~C~C~~G~~G   99 (132)
                      .|.|++||.+
T Consensus       334 ~C~C~~Gy~l  343 (791)
T 3m0c_C          334 ECLCPDGFQL  343 (791)
T ss_dssp             EEECCTTCEE
T ss_pred             ccCCCCCCcc
Confidence            4555566555

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=80.04  E-value=0.61  Score=39.73  Aligned_cols=27  Identities=33%  Similarity=0.733  Sum_probs=22.2

Q ss_pred             CCCCC-cEEcC----CCeEEcc-CCceeccCCCC
Q psy8484          78 RECVF-GSCTS----PNQCTCS-PGYVVINEASP  105 (132)
Q Consensus        78 ~~C~n-G~C~~----p~~C~C~-~G~~G~~~c~~  105 (132)
                      .+|+| |+|+.    ...|.|. +||.|.+ |+.
T Consensus         8 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~-Ce~   40 (553)
T 1q4g_A            8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPN-CTI   40 (553)
T ss_dssp             CCCCTTCEEEEETTTEEEEECTTSSEETTT-TCE
T ss_pred             CCCCCCCCcCCCCCCceEeeCCCCCcCCCC-CCC
Confidence            58998 89986    3579999 9999997 653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	132
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.01
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	96.93
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	96.86
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	96.7
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	96.68
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	96.5
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	96.45
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	96.41
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	96.15
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	96.08
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	95.89
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	95.81
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	95.71
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	95.69
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	95.66
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	94.94
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	94.65
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	94.49
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	94.4
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	94.38
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	93.72
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	93.56
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	92.97
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	92.91
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	92.68
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	92.24
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	91.76
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	91.56
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	91.18
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	91.03
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	90.25
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	89.82
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	89.74
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.61
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.09
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	88.02
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	86.89
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	86.54
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	83.56
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	82.44
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	80.14

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00016  Score=39.66  Aligned_cols=27  Identities=30%  Similarity=0.735  Sum_probs=21.9

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEASP  105 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~  105 (132)
                      .+|+| |+|+.   ..+|.|.+||.|.. |+.
T Consensus         7 ~PC~n~g~C~~~~~~y~C~C~~G~~G~~-Ce~   37 (39)
T d2vj3a2           7 NPCQNDATCLDQIGEFQCICMPGYEGVH-CEV   37 (39)
T ss_dssp             CCCCSSCEEEECSSCEEEECCTTEESSS-SCE
T ss_pred             CCCCCCCEEECCCCCEEEeCCCCCccCc-Cee
Confidence            58997 89973   46899999999997 553

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00024  Score=38.90  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=21.7

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .||+| |+|+.   ...|.|++||+|.. |+
T Consensus         6 ~PC~ngg~C~~~~~~y~C~C~~G~~G~~-Ce   35 (39)
T d1xkba1           6 SPCQNQGKCKDGLGEYTCTCLEGFEGKN-CE   35 (39)
T ss_dssp             CCCCSSCEECCCSSSCCEECCTTEETTT-TC
T ss_pred             CCCCCCcEEECCCCCEEEECCCCCCcCc-Ce
Confidence            58997 89984   46799999999997 54

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00036  Score=39.89  Aligned_cols=26  Identities=23%  Similarity=0.562  Sum_probs=21.8

Q ss_pred             CCCCCcEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVFGSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~nG~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.||+|+.   ...|.|++||.|.. |+
T Consensus        14 ~PC~nG~C~~~~~~y~C~C~~G~~G~~-Ce   42 (48)
T d1autl1          14 LCCGHGTCIDGIGSFSCDCRSGWEGRF-CQ   42 (48)
T ss_dssp             TTTTSEEECCCSSCCCEEECTTEESTT-SC
T ss_pred             CCCCCCEEECCCCCCeEeCCCCCcCCC-cc
Confidence            5899999984   46899999999997 54

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00041  Score=37.84  Aligned_cols=26  Identities=31%  Similarity=0.726  Sum_probs=21.3

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.   ..+|.|++||.|.. |+
T Consensus         9 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~-Ce   38 (39)
T d1edmb_           9 NPCLNGGSCKDDINSYECWCPFGFEGKN-CE   38 (39)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTCCSTT-SC
T ss_pred             CCCCCCcEEEcCCCCEEEECCCCCCCCC-CC
Confidence            58997 89974   45899999999987 54

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00061  Score=37.49  Aligned_cols=26  Identities=23%  Similarity=0.685  Sum_probs=21.2

Q ss_pred             CCCCC-cEEcC-----CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS-----PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~-----p~~C~C~~G~~G~~~c~  104 (132)
                      .+|+| |+|+.     ...|.|++||.|.. |+
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~-Ce   35 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQCPEGFAGKS-CE   35 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEECCTTCBSSS-CC
T ss_pred             CCCCCCCEEecCCCCCCeEECCCCCCCCCC-cC
Confidence            58998 89973     24799999999997 54

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00088  Score=35.60  Aligned_cols=24  Identities=29%  Similarity=0.768  Sum_probs=20.2

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceecc
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+|+| |+|+.   ..+|.|.+||.|..
T Consensus         6 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~   33 (35)
T d2vj3a3           6 SPCLHNGRCLDKINEFQCECPTGFTGHL   33 (35)
T ss_dssp             CCSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred             CCCCCCcEEECCCCCeEEECCCCCCCCC
Confidence            58997 89984   45899999999986

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.45  E-value=0.00067  Score=36.56  Aligned_cols=24  Identities=33%  Similarity=0.726  Sum_probs=20.2

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceecc
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVIN  101 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~  101 (132)
                      .+|+| |+|+.   ...|.|.+||+|..
T Consensus         8 ~PC~ngg~C~~~~~~y~C~C~~g~~G~~   35 (37)
T d2c4fl1           8 SPCQNGGSCKDQLQSYICFCLPAFEGRN   35 (37)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTEESTT
T ss_pred             CCCCCCCEEECCCCCeEEECCCCCcCCC
Confidence            58997 89974   45799999999986

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0007  Score=37.32  Aligned_cols=26  Identities=27%  Similarity=0.731  Sum_probs=21.1

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.   ...|.|++||+|.. |+
T Consensus        11 ~pC~n~g~C~n~~g~y~C~C~~G~~G~~-Ce   40 (42)
T d2vj3a1          11 NPCEHAGKCINTLGSFECQCLQGYTGPR-CE   40 (42)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTT-SC
T ss_pred             CCCCCCcEeECCCCCEEeECCCCCcCCC-Cc
Confidence            58986 99984   45899999999986 54

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.00065  Score=37.02  Aligned_cols=26  Identities=27%  Similarity=0.825  Sum_probs=21.0

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.   ...|.|.+||.|+. |+
T Consensus         7 ~pC~ngg~C~~~~~~~~C~C~~g~~G~~-Ce   36 (39)
T d1g1ta2           7 TSCSGHGECVETINNYTCKCDPGFSGLK-CE   36 (39)
T ss_dssp             TGGGGSEEEEEETTEEEEEECTTEESTT-SC
T ss_pred             CcCCCCcEEECCCCCEEEeCCCCCcCcC-cC
Confidence            58986 99984   35799999999997 54

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.00094  Score=36.52  Aligned_cols=26  Identities=27%  Similarity=0.732  Sum_probs=21.1

Q ss_pred             CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.   ...|.|.+||.|.. |+
T Consensus         7 ~pC~ngg~C~~~~~~y~C~C~~g~~G~~-Ce   36 (40)
T d1g1sa2           7 MSCSKQGECLETIGNYTCSCYPGFYGPE-CE   36 (40)
T ss_dssp             TGGGGSEEEEECSSSEEEEECTTEESTT-SC
T ss_pred             CcCCCCcEEECCCCCeEEeCCCCccCCC-CC
Confidence            58886 89984   45899999999987 54

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0017  Score=35.28  Aligned_cols=26  Identities=31%  Similarity=0.723  Sum_probs=20.5

Q ss_pred             CCccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         105 PNICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       105 ~~~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      .+.|.++  +|.| |+|++.   ++|.|++||
T Consensus         3 ~d~C~~~--PC~ngg~C~~~~~~y~C~C~~g~   32 (39)
T d1edmb_           3 GDQCESN--PCLNGGSCKDDINSYECWCPFGF   32 (39)
T ss_dssp             CCTTTTC--CCCTTCEEEEETTEEEEECCTTC
T ss_pred             cccCCCC--CCCCCcEEEcCCCCEEEECCCCC
Confidence            4556665  9997 799973   699999998

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.81  E-value=0.0015  Score=35.11  Aligned_cols=26  Identities=31%  Similarity=0.799  Sum_probs=20.7

Q ss_pred             CCccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         105 PNICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       105 ~~~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      .+.|.++  +|.| |+|++.   +.|.|++||
T Consensus         2 ~d~C~~~--PC~ngg~C~~~~~~y~C~C~~g~   31 (37)
T d2c4fl1           2 GDQCASS--PCQNGGSCKDQLQSYICFCLPAF   31 (37)
T ss_dssp             CCGGGGC--CCCTTCEEEEETTEEEEECCTTE
T ss_pred             cccCCCC--CCCCCCEEECCCCCeEEECCCCC
Confidence            4567766  9997 799973   699999997

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0021  Score=34.93  Aligned_cols=25  Identities=28%  Similarity=0.666  Sum_probs=19.3

Q ss_pred             CccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         106 NICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       106 ~~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      +.|.+.  +|.| |+|++.   ++|.|++||
T Consensus         2 d~C~~~--PC~n~g~C~~~~~~y~C~C~~G~   30 (39)
T d2vj3a2           2 NECVSN--PCQNDATCLDQIGEFQCICMPGY   30 (39)
T ss_dssp             CTTTTC--CCCSSCEEEECSSCEEEECCTTE
T ss_pred             cCCcCC--CCCCCCEEECCCCCEEEeCCCCC
Confidence            345555  8997 699973   699999998

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0029  Score=35.89  Aligned_cols=24  Identities=29%  Similarity=0.675  Sum_probs=19.4

Q ss_pred             ccccCCCCCCCCEEcCC---CceeCCCCC
Q psy8484         107 ICEPHCAECVNGVCSAP---NTCDCLDVL  132 (132)
Q Consensus       107 ~C~~~C~~C~nG~C~~p---~~C~C~~G~  132 (132)
                      .|.++  +|.||+|++.   +.|.|++||
T Consensus        10 ~C~~~--PC~nG~C~~~~~~y~C~C~~G~   36 (48)
T d1autl1          10 PCASL--CCGHGTCIDGIGSFSCDCRSGW   36 (48)
T ss_dssp             SSSST--TTTSEEECCCSSCCCEEECTTE
T ss_pred             cccCC--CCCCCEEECCCCCCeEeCCCCC
Confidence            45554  8999999973   799999998

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0038  Score=33.79  Aligned_cols=23  Identities=43%  Similarity=1.048  Sum_probs=18.4

Q ss_pred             cccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         108 CEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       108 C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      |.+.  +|.| |+|++.   +.|.|++||
T Consensus         3 C~~~--PC~ngg~C~~~~~~y~C~C~~G~   29 (39)
T d1xkba1           3 CETS--PCQNQGKCKDGLGEYTCTCLEGF   29 (39)
T ss_dssp             TTTC--CCCSSCEECCCSSSCCEECCTTE
T ss_pred             CCCC--CCCCCcEEECCCCCEEEECCCCC
Confidence            4444  8997 799973   799999997

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.0045  Score=32.66  Aligned_cols=23  Identities=26%  Similarity=0.837  Sum_probs=18.1

Q ss_pred             cccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         108 CEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       108 C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      |.+.  +|.| |+|++.   ++|.|++||
T Consensus         3 C~~~--PC~ngg~C~~~~~~y~C~C~~g~   29 (35)
T d2vj3a3           3 CASS--PCLHNGRCLDKINEFQCECPTGF   29 (35)
T ss_dssp             TTTC--CSTTTCEEEECSSCEEEECCTTE
T ss_pred             CCCC--CCCCCcEEECCCCCeEEECCCCC
Confidence            4444  8997 799973   699999997

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.0055  Score=33.63  Aligned_cols=19  Identities=32%  Similarity=0.828  Sum_probs=17.4

Q ss_pred             CcEEcCCCeEEccCCceecc
Q psy8484          82 FGSCTSPNQCTCSPGYVVIN  101 (132)
Q Consensus        82 nG~C~~p~~C~C~~G~~G~~  101 (132)
                      ||+|+. ++|.|.+||+|.+
T Consensus        20 hG~C~~-G~C~C~~Gw~G~~   38 (41)
T d1l3ya_          20 RGLCFC-GKCRCHPGFEGSA   38 (41)
T ss_dssp             HEEEET-TEEEECTTCCTTT
T ss_pred             CCeEEC-CEEEcCCCCcccC
Confidence            699987 8999999999987

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=94.49  E-value=0.0084  Score=32.82  Aligned_cols=26  Identities=35%  Similarity=0.764  Sum_probs=20.3

Q ss_pred             CCCCC-cEEcC--C--CeEEccC-CceeccCCC
Q psy8484          78 RECVF-GSCTS--P--NQCTCSP-GYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~--p--~~C~C~~-G~~G~~~c~  104 (132)
                      .+|+| |+|+.  .  ..|.|.+ ||.|.. |+
T Consensus         8 nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~-Ce   39 (42)
T d1q4ga2           8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPN-CT   39 (42)
T ss_dssp             CCCCTTCEEEEETTTEEEEECTTSSEETTT-TC
T ss_pred             CCCCCCCEeeeCCCCCEEEECCCCCcCCcC-cC
Confidence            58997 99974  2  3799986 999987 54

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.012  Score=34.77  Aligned_cols=26  Identities=35%  Similarity=0.806  Sum_probs=20.4

Q ss_pred             CCCCC-cEEc-----C---CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCT-----S---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~-----~---p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|.     .   ...|.|.+||.|.. |+
T Consensus        12 ~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~-Ce   46 (63)
T d1haea_          12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR-CT   46 (63)
T ss_dssp             TTSCTTCEEEEEESSSSSCCEEEECCTTEESTT-SC
T ss_pred             CcCCCCCEEeecccccCCCCEEeECCCCCCCCC-cC
Confidence            57998 8994     1   23799999999997 54

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.0098  Score=31.92  Aligned_cols=26  Identities=23%  Similarity=0.625  Sum_probs=20.4

Q ss_pred             CCCC-cEEcC------CCeEEccCCceeccCCCC
Q psy8484          79 ECVF-GSCTS------PNQCTCSPGYVVINEASP  105 (132)
Q Consensus        79 ~C~n-G~C~~------p~~C~C~~G~~G~~~c~~  105 (132)
                      .|.| |+|++      -.+|.|+.+|.|.. |++
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~H-CEi   35 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH-CEI   35 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTT-SCE
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCcee-EEe
Confidence            4777 89984      34799999999987 553

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.72  E-value=0.016  Score=31.54  Aligned_cols=28  Identities=25%  Similarity=0.630  Sum_probs=19.3

Q ss_pred             CCccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         105 PNICEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       105 ~~~C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      +++|...=.+|.| |+|++.   +.|.|++||
T Consensus         3 ideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~   34 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKCINTLGSFECQCLQGY   34 (42)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTE
T ss_pred             CccccCCCCCCCCCcEeECCCCCEEeECCCCC
Confidence            3445422128885 799973   699999997

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.56  E-value=0.018  Score=31.23  Aligned_cols=26  Identities=31%  Similarity=0.788  Sum_probs=20.2

Q ss_pred             CCCCC-cEEcC----CCeEEcc-CCceeccCCC
Q psy8484          78 RECVF-GSCTS----PNQCTCS-PGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~----p~~C~C~-~G~~G~~~c~  104 (132)
                      .+|+| |+|+.    ..+|.|. +||.|.. |+
T Consensus         7 ~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~-Ce   38 (41)
T d1cvua2           7 NPCQNRGECMSTGFDQYKCDCTRTGFYGEN-CT   38 (41)
T ss_dssp             CCCCTTCEEEEEETTEEEEECTTSSEETTT-TC
T ss_pred             CCCCCCCEEEECCCCCEEEeCcCCCcCCcC-cC
Confidence            58997 99974    2479996 6999987 54

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.97  E-value=0.0081  Score=32.56  Aligned_cols=23  Identities=30%  Similarity=0.862  Sum_probs=18.0

Q ss_pred             cccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         108 CEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       108 C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      |.++  +|.| |+|++.   ++|.|++||
T Consensus         4 C~~~--pC~ngg~C~~~~~~y~C~C~~g~   30 (40)
T d1g1sa2           4 CQDM--SCSKQGECLETIGNYTCSCYPGF   30 (40)
T ss_dssp             CCTT--GGGGSEEEEECSSSEEEEECTTE
T ss_pred             ccCC--cCCCCcEEECCCCCeEEeCCCCc
Confidence            4444  8986 799973   699999997

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.023  Score=30.75  Aligned_cols=19  Identities=32%  Similarity=0.931  Sum_probs=15.8

Q ss_pred             CCCC-CEEcC-----CCceeCCCCC
Q psy8484         114 ECVN-GVCSA-----PNTCDCLDVL  132 (132)
Q Consensus       114 ~C~n-G~C~~-----p~~C~C~~G~  132 (132)
                      +|.| |+|++     .++|.|++||
T Consensus         5 PC~ngG~C~~~~~~~~y~C~C~~g~   29 (41)
T d1tpga1           5 RCFNGGTCQQALYFSDFVCQCPEGF   29 (41)
T ss_dssp             CSCTTCEEEEESSSSCEEEECCTTC
T ss_pred             CCCCCCEEecCCCCCCeEECCCCCC
Confidence            8998 69985     2589999998

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.68  E-value=0.0071  Score=32.62  Aligned_cols=23  Identities=30%  Similarity=0.800  Sum_probs=17.8

Q ss_pred             cccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484         108 CEPHCAECVN-GVCSAP---NTCDCLDVL  132 (132)
Q Consensus       108 C~~~C~~C~n-G~C~~p---~~C~C~~G~  132 (132)
                      |.++  +|.| |+|++.   +.|.|++||
T Consensus         4 C~~~--pC~ngg~C~~~~~~~~C~C~~g~   30 (39)
T d1g1ta2           4 CTNT--SCSGHGECVETINNYTCKCDPGF   30 (39)
T ss_dssp             CCTT--GGGGSEEEEEETTEEEEEECTTE
T ss_pred             ccCC--cCCCCcEEECCCCCEEEeCCCCC
Confidence            4444  8986 799973   689999997

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.24  E-value=0.061  Score=30.56  Aligned_cols=26  Identities=27%  Similarity=0.629  Sum_probs=20.7

Q ss_pred             CCCCC-cEEcC-----CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS-----PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~-----p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.     ...|.|++||.|.. |+
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~-Ce   43 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDR-CQ   43 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTCCSSS-SC
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCCcCCC-Cc
Confidence            47998 99962     35799999999997 54

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.76  E-value=0.018  Score=31.32  Aligned_cols=19  Identities=32%  Similarity=0.763  Sum_probs=13.7

Q ss_pred             CCCCCEEcC-C--CceeCCCCC
Q psy8484         114 ECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus       114 ~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      .|.||.|++ +  +.|.|++||
T Consensus        11 ~C~~~~C~Nt~Gsy~C~C~~Gy   32 (42)
T d1lmja2          11 LCRGGVCHNTEGSYRCECPPGH   32 (42)
T ss_dssp             TTTTSEEEEETTEEEEESCTTS
T ss_pred             CCCCCEeECCCCCeEEeCCCCC
Confidence            566778876 3  578888876

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=91.56  E-value=0.032  Score=30.31  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=19.0

Q ss_pred             CCccccCCCCCCC-CEEcC-C---CceeCCC-CC
Q psy8484         105 PNICEPHCAECVN-GVCSA-P---NTCDCLD-VL  132 (132)
Q Consensus       105 ~~~C~~~C~~C~n-G~C~~-p---~~C~C~~-G~  132 (132)
                      ++.|.++  +|+| |+|++ .   ++|.|+. ||
T Consensus         2 id~C~~n--PC~ngG~C~~~~~~~y~C~C~~~G~   33 (42)
T d1q4ga2           2 VNPCCYY--PCQHQGICVRFGLDRYQCDCTRTGY   33 (42)
T ss_dssp             CCGGGGC--CCCTTCEEEEETTTEEEEECTTSSE
T ss_pred             CccCcCC--CCCCCCEeeeCCCCCEEEECCCCCc
Confidence            3456666  9997 79985 2   5899975 76

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.18  E-value=0.061  Score=29.53  Aligned_cols=23  Identities=30%  Similarity=0.762  Sum_probs=18.8

Q ss_pred             CC-CcEEcCCCeEEcc-CCceeccCCC
Q psy8484          80 CV-FGSCTSPNQCTCS-PGYVVINEAS  104 (132)
Q Consensus        80 C~-nG~C~~p~~C~C~-~G~~G~~~c~  104 (132)
                      |. ||.|+- ++|.|. +||.|+. |+
T Consensus        13 Cng~G~C~c-G~C~C~~~gy~G~~-Ce   37 (43)
T d1jv2b5          13 CSGRGKCEC-GSCVCIQPGSYGDT-CE   37 (43)
T ss_dssp             GGGTEEEET-TEEEECCSSCBSTT-SC
T ss_pred             ECCCCEEEC-CEeEeCCCCccCCc-cc
Confidence            55 699986 999995 7999997 54

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.03  E-value=0.042  Score=30.67  Aligned_cols=26  Identities=27%  Similarity=0.706  Sum_probs=20.1

Q ss_pred             CCCCC-cEEcC-----CCeEEccCCceeccCCC
Q psy8484          78 RECVF-GSCTS-----PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~n-G~C~~-----p~~C~C~~G~~G~~~c~  104 (132)
                      .+|.| |+|+.     ...|.|++||+|.. |+
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~-Ce   41 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGYIGER-CQ   41 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTT-SC
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCcccCC-CC
Confidence            46888 89952     24799999999987 53

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.25  E-value=0.032  Score=28.45  Aligned_cols=21  Identities=24%  Similarity=0.841  Sum_probs=16.4

Q ss_pred             CC-CcEEcCCCeEEccCCceecc
Q psy8484          80 CV-FGSCTSPNQCTCSPGYVVIN  101 (132)
Q Consensus        80 C~-nG~C~~p~~C~C~~G~~G~~  101 (132)
                      |. ||.|.- +.|.|.+||+|..
T Consensus         5 C~ghG~C~C-G~C~C~~gw~G~~   26 (31)
T d1jv2b4           5 CSGHGQCSC-GDCLCDSDWTGYY   26 (31)
T ss_dssp             SCCCTTCCS-TTTCCCTTEESSS
T ss_pred             ccCCCcccC-CceEccCCccccc
Confidence            44 577754 7799999999986

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.82  E-value=0.084  Score=29.23  Aligned_cols=26  Identities=31%  Similarity=0.827  Sum_probs=19.8

Q ss_pred             CCCCCcEEc--C---CCeEEccCCceeccCCC
Q psy8484          78 RECVFGSCT--S---PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~nG~C~--~---p~~C~C~~G~~G~~~c~  104 (132)
                      ..|.||.|.  .   ...|.|++||.|.. |+
T Consensus        12 ~yC~nG~C~~~~~~~~~~C~C~~gY~G~R-Ce   42 (46)
T d1k36a_          12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVR-CE   42 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTCSSTT-SC
T ss_pred             CcCcCCEEEEeCCCCccEeECCCCceecC-ce
Confidence            478899884  1   23699999999986 54

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.74  E-value=0.1  Score=28.24  Aligned_cols=23  Identities=35%  Similarity=0.940  Sum_probs=18.1

Q ss_pred             CCCCcEEc-----CCCeEEccCCceecc
Q psy8484          79 ECVFGSCT-----SPNQCTCSPGYVVIN  101 (132)
Q Consensus        79 ~C~nG~C~-----~p~~C~C~~G~~G~~  101 (132)
                      =|.||.|.     +.-.|.|..||.|..
T Consensus         9 yCihG~C~~i~~l~~~~C~C~~gY~G~R   36 (41)
T d1xdtr_           9 FCIHGECKYVKELRAPSCICHPGYHGER   36 (41)
T ss_dssp             CCSSEEECCBGGGTBCCEEECTTEESTT
T ss_pred             EeECcEEeecCcCCCceeECCCCCeecC
Confidence            37789995     234699999999986

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.61  E-value=0.042  Score=30.24  Aligned_cols=19  Identities=32%  Similarity=0.777  Sum_probs=14.0

Q ss_pred             CCCCCEEcC-C--CceeCCCCC
Q psy8484         114 ECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus       114 ~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      .|.++.|++ +  +.|.|++||
T Consensus        12 ~C~~~~C~Nt~Gsy~C~C~~Gy   33 (44)
T d1lmja1          12 LCGRGQCVNTPGDFECKCDEGY   33 (44)
T ss_dssp             TTTTSCEEEETTEEEECCCSSE
T ss_pred             CCCCCEeEcCCCCeEEeCCCCC
Confidence            566778886 3  588888886

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.09  E-value=0.039  Score=29.24  Aligned_cols=19  Identities=32%  Similarity=0.807  Sum_probs=14.3

Q ss_pred             CCCCCEEcCC---CceeCCCCC
Q psy8484         114 ECVNGVCSAP---NTCDCLDVL  132 (132)
Q Consensus       114 ~C~nG~C~~p---~~C~C~~G~  132 (132)
                      +|.||+|.+.   .+|.|.+||
T Consensus         9 pCGnGTCtNviGgFec~C~~GF   30 (39)
T d1emoa2           9 PCGNGTCKNVIGGFECTCEEGF   30 (39)
T ss_dssp             SSSSSCEEECSSSEEECCSSSS
T ss_pred             ccCCceeeecccceEEeecCCc
Confidence            7788888762   478888876

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.02  E-value=0.044  Score=29.85  Aligned_cols=19  Identities=26%  Similarity=0.564  Sum_probs=13.3

Q ss_pred             CCCCCEEcC-C--CceeCCCCC
Q psy8484         114 ECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus       114 ~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      .|.++.|++ +  +.|.|++||
T Consensus        12 ~c~~~~C~Nt~Gsy~C~C~~Gy   33 (43)
T d1uzka2          12 LCQGGKCINTFGSFQCRCPTGY   33 (43)
T ss_dssp             GGBTSEEEECSSCEEEECCTTC
T ss_pred             CcCCCEEECCCCCeEeECCCCC
Confidence            455677776 2  578888876

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.89  E-value=0.15  Score=27.45  Aligned_cols=27  Identities=33%  Similarity=0.817  Sum_probs=16.4

Q ss_pred             CCccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484         105 PNICEPHCAECVNGVCSA-P--NTCDCLDVL  132 (132)
Q Consensus       105 ~~~C~~~C~~C~nG~C~~-p--~~C~C~~G~  132 (132)
                      +++|... ..|-++.|++ +  +.|.|++||
T Consensus         3 idEC~~~-~~~c~~~C~Nt~G~y~C~C~~Gy   32 (43)
T d1uzka1           3 VNECLDP-TTCISGNCVNTPGSYICDCPPDF   32 (43)
T ss_dssp             CCGGGST-TSSBTSEEEEETTEEEEECCTTC
T ss_pred             ccccCCC-CcCcCCEeECCCCCEEEecCCCC
Confidence            4455432 1344678876 3  588888887

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.54  E-value=0.16  Score=27.14  Aligned_cols=19  Identities=16%  Similarity=0.417  Sum_probs=16.1

Q ss_pred             CCceEeCCCceeCCCceec
Q psy8484          56 THVRICCEGYEDDHGSCRP   74 (132)
Q Consensus        56 ~~~c~C~~Gy~~~~~~C~~   74 (132)
                      .+.|.|.+||+|.+..|+|
T Consensus        21 sy~C~C~~Gy~GdG~~C~~   39 (40)
T d1gl4a2          21 GFCCRCVANYTGNGRQCVA   39 (40)
T ss_dssp             CEEEEECTTEEECSSSEEE
T ss_pred             CeEeECCCCCcCCCCEeeC
Confidence            4679999999999888865

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.56  E-value=0.4  Score=26.74  Aligned_cols=27  Identities=19%  Similarity=0.531  Sum_probs=18.8

Q ss_pred             CCCCCC-cEEc--C--CCeEEccCCceeccCCC
Q psy8484          77 ERECVF-GSCT--S--PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        77 ~~~C~n-G~C~--~--p~~C~C~~G~~G~~~c~  104 (132)
                      ..-|.| |.|.  .  ...|.|+.||+|.. |+
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~G~r-Ce   44 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGAR-CE   44 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETTT-TC
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCeeCC-Cc
Confidence            346888 4553  1  23799999999986 43

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.44  E-value=0.28  Score=27.34  Aligned_cols=26  Identities=31%  Similarity=0.802  Sum_probs=18.1

Q ss_pred             CCCCCcEEc-C----CCeEEccCCceeccCCC
Q psy8484          78 RECVFGSCT-S----PNQCTCSPGYVVINEAS  104 (132)
Q Consensus        78 ~~C~nG~C~-~----p~~C~C~~G~~G~~~c~  104 (132)
                      .-|.||.|. .    ...|+|++||.|.. |+
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~R-Ce   43 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGAR-CE   43 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEESTT-SC
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEecC-Cc
Confidence            458885442 1    23699999999986 43

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.14  E-value=0.42  Score=25.65  Aligned_cols=16  Identities=25%  Similarity=0.627  Sum_probs=11.6

Q ss_pred             CCEEcC---CCceeCCCCC
Q psy8484         117 NGVCSA---PNTCDCLDVL  132 (132)
Q Consensus       117 nG~C~~---p~~C~C~~G~  132 (132)
                      ++.|++   .+.|.|++||
T Consensus        16 ~~~C~Nt~Gsy~C~C~~Gy   34 (43)
T d1emoa1          16 HGQCINTDGSYRCECPFGY   34 (43)
T ss_dssp             SSCCCCCSSCCCCCCCTTE
T ss_pred             CCEeECCCCCeEeECCCCc
Confidence            566766   3688888886